BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032066
(148 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296083731|emb|CBI23720.3| unnamed protein product [Vitis vinifera]
Length = 283
Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/142 (88%), Positives = 136/142 (95%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
VLY+R+TGRSRGFAFVTMS+VEDCNAVIENLDG EY GR LRVNFSDKPKPKLPLY ET+
Sbjct: 142 VLYNRDTGRSRGFAFVTMSSVEDCNAVIENLDGSEYGGRTLRVNFSDKPKPKLPLYPETE 201
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
+KLFVGNLSWSVT+ESL Q FQEYGNV+GARVLYDGE+GRSRGYGFVCYSTKAEM+TALE
Sbjct: 202 YKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKAEMDTALE 261
Query: 127 SLNGVELEGRAMRVSLAQGRRS 148
SLNGVELEGRA+R+SLAQGRRS
Sbjct: 262 SLNGVELEGRAIRISLAQGRRS 283
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
+ + KL+ GNL +S + L Q YG+ VLY+ ++GRSRG+ FV S+ +
Sbjct: 107 SPVNTKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCN 166
Query: 123 TALESLNGVELEGRAMRVSLA 143
+E+L+G E GR +RV+ +
Sbjct: 167 AVIENLDGSEYGGRTLRVNFS 187
>gi|255574887|ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 285
Score = 261 bits (668), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 121/142 (85%), Positives = 135/142 (95%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
VLYDR+TGRSRGFAFVTMSTVEDCNAVIENLDG +++GRILRVNFSDKPKPK PLY ET+
Sbjct: 144 VLYDRDTGRSRGFAFVTMSTVEDCNAVIENLDGSQFMGRILRVNFSDKPKPKEPLYPETE 203
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
KLFVGNLSWSVT+ESL +AFQEYGN+VGARVLYDGE+GRSRGYGFVCY+T++EME AL
Sbjct: 204 HKLFVGNLSWSVTSESLVEAFQEYGNIVGARVLYDGETGRSRGYGFVCYATRSEMENALV 263
Query: 127 SLNGVELEGRAMRVSLAQGRRS 148
SLNGVELEGRAMRVSLAQG++S
Sbjct: 264 SLNGVELEGRAMRVSLAQGKKS 285
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+ GNL ++V + L Q+YG VLYD ++GRSRG+ FV ST + +E+
Sbjct: 114 KLYFGNLPYNVDSAQLAGIIQDYGTPELVEVLYDRDTGRSRGFAFVTMSTVEDCNAVIEN 173
Query: 128 LNGVELEGRAMRVSLA 143
L+G + GR +RV+ +
Sbjct: 174 LDGSQFMGRILRVNFS 189
>gi|224099981|ref|XP_002311696.1| predicted protein [Populus trichocarpa]
gi|118486835|gb|ABK95252.1| unknown [Populus trichocarpa]
gi|222851516|gb|EEE89063.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 261 bits (666), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 119/142 (83%), Positives = 135/142 (95%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
VLY RETGRSRGFAFVTMS++EDC VIENLDG +Y+GRILRVNF+DKPKPK PLY ET+
Sbjct: 138 VLYHRETGRSRGFAFVTMSSIEDCETVIENLDGSQYMGRILRVNFADKPKPKEPLYPETE 197
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
+KLF+GNLSWSVT+ESLTQAFQEYGNVVGARVLYDGE+G+SRGYGFVCYSTK E+ETAL+
Sbjct: 198 YKLFIGNLSWSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKEELETALQ 257
Query: 127 SLNGVELEGRAMRVSLAQGRRS 148
SLNGVELEGRA+RVSLA+GR+S
Sbjct: 258 SLNGVELEGRALRVSLAEGRKS 279
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+ GNL ++V + L QEYG VLY E+GRSRG+ FV S+ + ET +E+
Sbjct: 108 KLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFVTMSSIEDCETVIEN 167
Query: 128 LNGVELEGRAMRVSLA 143
L+G + GR +RV+ A
Sbjct: 168 LDGSQYMGRILRVNFA 183
>gi|224107511|ref|XP_002314506.1| predicted protein [Populus trichocarpa]
gi|222863546|gb|EEF00677.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 258 bits (660), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 120/142 (84%), Positives = 134/142 (94%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
VLY RETGRSRGFAFVTMS++EDCNAVIENLD +Y+GRILRVNFSD PKPK PLY ET+
Sbjct: 138 VLYHRETGRSRGFAFVTMSSIEDCNAVIENLDESQYMGRILRVNFSDNPKPKEPLYPETE 197
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
+KLFVGNLSWS T+ESLTQAFQEYGNVVGARVLYDGE+G+SRGYGFVCYSTKAEM+TAL
Sbjct: 198 YKLFVGNLSWSATSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKAEMQTALV 257
Query: 127 SLNGVELEGRAMRVSLAQGRRS 148
SL+GVELEGRA+RVSLA+GR+S
Sbjct: 258 SLDGVELEGRALRVSLAEGRKS 279
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+ GNL ++V + L QEYG+ VLY E+GRSRG+ FV S+ + +E+
Sbjct: 108 KLYFGNLPYNVDSAQLAGIIQEYGSPEMVEVLYHRETGRSRGFAFVTMSSIEDCNAVIEN 167
Query: 128 LNGVELEGRAMRVSLAQGRR 147
L+ + GR +RV+ + +
Sbjct: 168 LDESQYMGRILRVNFSDNPK 187
>gi|225433269|ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261382 [Vitis vinifera]
Length = 751
Score = 254 bits (650), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 118/136 (86%), Positives = 129/136 (94%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ VLY+R+TGRSRGFAFVTMS+VEDCNAVIENLDG EY GR LRVNFSDKPKPKLPLY E
Sbjct: 140 VEVLYNRDTGRSRGFAFVTMSSVEDCNAVIENLDGSEYGGRTLRVNFSDKPKPKLPLYPE 199
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
T++KLFVGNLSWSVT+ESL Q FQEYGNV+GARVLYDGE+GRSRGYGFVCYSTKAEM+TA
Sbjct: 200 TEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKAEMDTA 259
Query: 125 LESLNGVELEGRAMRV 140
LESLNGVELEGRA+RV
Sbjct: 260 LESLNGVELEGRAIRV 275
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+ GNL +S + L Q YG+ VLY+ ++GRSRG+ FV S+ + +E+
Sbjct: 112 KLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIEN 171
Query: 128 LNGVELEGRAMRVSLA 143
L+G E GR +RV+ +
Sbjct: 172 LDGSEYGGRTLRVNFS 187
>gi|356534904|ref|XP_003535991.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 282
Score = 251 bits (641), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 117/144 (81%), Positives = 131/144 (90%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ VLYDR++G+SRGFAFVTMS +EDCNAVIENLDG+E+LGR LRVNFS KPKPK PLY E
Sbjct: 139 IEVLYDRDSGKSRGFAFVTMSCIEDCNAVIENLDGKEFLGRTLRVNFSSKPKPKEPLYPE 198
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
T+ KLFVGNLSWSVT E LTQAFQEYG VVGARVLYDGE+GRSRGYGFVCYST+AEME A
Sbjct: 199 TEHKLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTQAEMEAA 258
Query: 125 LESLNGVELEGRAMRVSLAQGRRS 148
+ +LN VELEGRAMRVSLAQG+R+
Sbjct: 259 VAALNDVELEGRAMRVSLAQGKRA 282
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+ GNL +SV + L Q+YG+ VLYD +SG+SRG+ FV S + +E+
Sbjct: 111 KLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDSGKSRGFAFVTMSCIEDCNAVIEN 170
Query: 128 LNGVELEGRAMRVSLA 143
L+G E GR +RV+ +
Sbjct: 171 LDGKEFLGRTLRVNFS 186
>gi|449432502|ref|XP_004134038.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449487476|ref|XP_004157645.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 276
Score = 248 bits (634), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 113/144 (78%), Positives = 133/144 (92%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ VLYDR TG+SRGFAFVTMS++EDCN VIENLDG Y+GRILRVNFSDKPKPK PLY E
Sbjct: 131 IEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPE 190
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
T++KLFVGNLSWSVT+E LTQAFQEYGNVVGARV+YDGE+G+SRGYGFV YSTK+EMETA
Sbjct: 191 TEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETA 250
Query: 125 LESLNGVELEGRAMRVSLAQGRRS 148
LE++N +ELEGR +RVSLA+G+++
Sbjct: 251 LETINELELEGRVIRVSLAEGKQA 274
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+ GNL +SV + L Q+YG VLYD +G+SRG+ FV S+ + +E+
Sbjct: 103 KLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIEN 162
Query: 128 LNGVELEGRAMRVSLA 143
L+G GR +RV+ +
Sbjct: 163 LDGSAYMGRILRVNFS 178
>gi|558629|emb|CAA57551.1| chloroplast RNA binding protein [Phaseolus vulgaris]
Length = 287
Score = 248 bits (632), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 117/144 (81%), Positives = 130/144 (90%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ VLYDR+TG+SRGFAFVTMS +EDCNAVIENLDG+EYLGR LRVNFS+KPK K PLY E
Sbjct: 142 IEVLYDRDTGKSRGFAFVTMSCIEDCNAVIENLDGKEYLGRTLRVNFSNKPKAKEPLYPE 201
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
T+ KLFVGNLSWSVT E LTQAFQEYG VVGARVLYDGE+GRSRGYGFVC+STK EME A
Sbjct: 202 TEHKLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCFSTKEEMEAA 261
Query: 125 LESLNGVELEGRAMRVSLAQGRRS 148
L +LN VELEGRAMRVSLA+G+R+
Sbjct: 262 LGALNDVELEGRAMRVSLAEGKRA 285
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+ GNL +SV + L Q+YG+ VLYD ++G+SRG+ FV S + +E+
Sbjct: 114 KLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVIEN 173
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
L+G E GR +RV+ + ++
Sbjct: 174 LDGKEYLGRTLRVNFSNKPKA 194
>gi|388500434|gb|AFK38283.1| unknown [Lotus japonicus]
Length = 273
Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 114/144 (79%), Positives = 130/144 (90%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ VLYDR++G+SRGFAFVTMS VEDCN VIENLDG+E+LGR LRVN SDKPKPK PLY E
Sbjct: 130 IEVLYDRDSGKSRGFAFVTMSCVEDCNTVIENLDGKEFLGRTLRVNLSDKPKPKEPLYPE 189
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
T+ KLFVGNLSW+VT+ESL Q FQEYG VVGARVLYDGE+GRSRGYGFVCYS ++E+ETA
Sbjct: 190 TEHKLFVGNLSWTVTSESLIQVFQEYGTVVGARVLYDGETGRSRGYGFVCYSKRSELETA 249
Query: 125 LESLNGVELEGRAMRVSLAQGRRS 148
L SLN VELEGRA+RVSLA+G+RS
Sbjct: 250 LISLNNVELEGRAIRVSLAEGKRS 273
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+ GNL +SV + L +EYG+ VLYD +SG+SRG+ FV S + T +E+
Sbjct: 102 KLYFGNLPYSVDSAQLAGLIEEYGSAELIEVLYDRDSGKSRGFAFVTMSCVEDCNTVIEN 161
Query: 128 LNGVELEGRAMRVSLA 143
L+G E GR +RV+L+
Sbjct: 162 LDGKEFLGRTLRVNLS 177
>gi|357439793|ref|XP_003590174.1| 31 kDa ribonucleoprotein [Medicago truncatula]
gi|355479222|gb|AES60425.1| 31 kDa ribonucleoprotein [Medicago truncatula]
Length = 387
Score = 245 bits (626), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 110/144 (76%), Positives = 133/144 (92%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ VLYDR+TG+SRGFAFVTMS VEDCNAVI+NLDG+E++GR LRVNFSDKPKPK PLY E
Sbjct: 244 IEVLYDRDTGKSRGFAFVTMSCVEDCNAVIQNLDGKEFMGRTLRVNFSDKPKPKEPLYPE 303
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
T++KLFVGNL+W+VT+ESLTQAFQE+G VVGARVL+DGE+G+SRGYGFV Y+TK+EM+TA
Sbjct: 304 TEYKLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKSEMDTA 363
Query: 125 LESLNGVELEGRAMRVSLAQGRRS 148
L ++ VELEGR +RVSLAQG+RS
Sbjct: 364 LAIMDNVELEGRTLRVSLAQGKRS 387
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+T KL+ GNL +SV + L +EYG+ VLYD ++G+SRG+ FV S +
Sbjct: 212 DTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCNA 271
Query: 124 ALESLNGVELEGRAMRVSLA 143
+++L+G E GR +RV+ +
Sbjct: 272 VIQNLDGKEFMGRTLRVNFS 291
>gi|217073820|gb|ACJ85270.1| unknown [Medicago truncatula]
Length = 285
Score = 244 bits (623), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 110/144 (76%), Positives = 133/144 (92%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ VLYDR+TG+SRGFAFVTMS VEDCNAVI+NLDG+E++GR LRVNFSDKPKPK PLY E
Sbjct: 142 IEVLYDRDTGKSRGFAFVTMSCVEDCNAVIQNLDGKEFMGRTLRVNFSDKPKPKEPLYPE 201
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
T++KLFVGNL+W+VT+ESLTQAFQE+G VVGARVL+DGE+G+SRGYGFV Y+TK+EM+TA
Sbjct: 202 TEYKLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKSEMDTA 261
Query: 125 LESLNGVELEGRAMRVSLAQGRRS 148
L ++ VELEGR +RVSLAQG+RS
Sbjct: 262 LAIMDNVELEGRTLRVSLAQGKRS 285
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+T KL+ GNL +SV + L +EYG+ VLYD ++G+SRG+ FV S +
Sbjct: 110 DTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCNA 169
Query: 124 ALESLNGVELEGRAMRVSLA 143
+++L+G E GR +RV+ +
Sbjct: 170 VIQNLDGKEFMGRTLRVNFS 189
>gi|359806610|ref|NP_001241528.1| uncharacterized protein LOC100820203 [Glycine max]
gi|255645445|gb|ACU23218.1| unknown [Glycine max]
gi|255645775|gb|ACU23380.1| unknown [Glycine max]
Length = 289
Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 120/144 (83%), Positives = 131/144 (90%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ VLYDR+TG+SRGFAFVTMS +EDCNAVIENLDG+E+LGR LRVNFS KPKPK PLY E
Sbjct: 146 IEVLYDRDTGKSRGFAFVTMSCIEDCNAVIENLDGKEFLGRTLRVNFSSKPKPKEPLYPE 205
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
T+ KLFVGNLSWSVT E LTQAFQEYG VVGARVLYDGE+GRSRGYGFVCYSTKAEME A
Sbjct: 206 TEHKLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTKAEMEAA 265
Query: 125 LESLNGVELEGRAMRVSLAQGRRS 148
L +LN VELEGRAMRVSLAQG+R+
Sbjct: 266 LAALNDVELEGRAMRVSLAQGKRA 289
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+ GNL +SV + L Q++G+ VLYD ++G+SRG+ FV S + +E+
Sbjct: 118 KLYFGNLPYSVDSAKLAGLIQDFGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVIEN 177
Query: 128 LNGVELEGRAMRVSLA 143
L+G E GR +RV+ +
Sbjct: 178 LDGKEFLGRTLRVNFS 193
>gi|388493590|gb|AFK34861.1| unknown [Medicago truncatula]
Length = 285
Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 108/144 (75%), Positives = 130/144 (90%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ VLYDR+TG+SRGFAFVTMS VEDCNAVI+NLDG+E++GR LRVNFSDKPKPK PLY E
Sbjct: 142 IEVLYDRDTGKSRGFAFVTMSCVEDCNAVIQNLDGKEFMGRTLRVNFSDKPKPKEPLYPE 201
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
T++KLFVGNL+W+VT ES TQAFQE+G VVGARVL+DGE+G+ RGYGFV Y+TK+EM+TA
Sbjct: 202 TEYKLFVGNLAWTVTFESFTQAFQEHGTVVGARVLFDGETGKFRGYGFVSYATKSEMDTA 261
Query: 125 LESLNGVELEGRAMRVSLAQGRRS 148
L ++ VELEGR +RVSLAQG+RS
Sbjct: 262 LAIMDNVELEGRTLRVSLAQGKRS 285
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+T KL+ GNL +SV + L +EYG+ VLYD ++G+SRG+ FV S +
Sbjct: 110 DTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCNA 169
Query: 124 ALESLNGVELEGRAMRVSLA 143
+++L+G E GR +RV+ +
Sbjct: 170 VIQNLDGKEFMGRTLRVNFS 189
>gi|297837519|ref|XP_002886641.1| hypothetical protein ARALYDRAFT_475310 [Arabidopsis lyrata subsp.
lyrata]
gi|297332482|gb|EFH62900.1| hypothetical protein ARALYDRAFT_475310 [Arabidopsis lyrata subsp.
lyrata]
Length = 252
Score = 234 bits (598), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 109/142 (76%), Positives = 131/142 (92%), Gaps = 1/142 (0%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP-KLPLYAET 65
VLY+R+TG+SRGFAFVTMS VEDCN +I+NLDG EYLGR L+VNF+DKPKP K PLY ET
Sbjct: 110 VLYNRDTGQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVNFADKPKPNKEPLYPET 169
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+ KLFVGNLSW+VT+ESL +AF+E G+VVGARV+YDG++GRSRGYGFVCYS+KAEMETAL
Sbjct: 170 EHKLFVGNLSWTVTSESLAEAFRECGDVVGARVVYDGDTGRSRGYGFVCYSSKAEMETAL 229
Query: 126 ESLNGVELEGRAMRVSLAQGRR 147
ESL+G ELEGRA+RV+LAQG++
Sbjct: 230 ESLDGFELEGRAIRVNLAQGKK 251
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 51/86 (59%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A + KL+ GNL ++V + +L Q Q++ N VLY+ ++G+SRG+ FV S +
Sbjct: 75 AAINTKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVEDCN 134
Query: 123 TALESLNGVELEGRAMRVSLAQGRRS 148
+++L+G E GRA++V+ A +
Sbjct: 135 IIIDNLDGTEYLGRALKVNFADKPKP 160
>gi|125541605|gb|EAY88000.1| hypothetical protein OsI_09422 [Oryza sativa Indica Group]
Length = 318
Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/141 (76%), Positives = 123/141 (87%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
VLYDR TGRSRGFAFVTMST+EDC VI+NLDG Y GR +RVNF+DKPKPKLPLY ET+
Sbjct: 178 VLYDRATGRSRGFAFVTMSTIEDCEQVIKNLDGSLYSGRTMRVNFADKPKPKLPLYPETE 237
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
KLFVGNLSW+VT+E LT+ FQ+ GNVVGARVLYDGE+GRSRGYGFVCYSTK EM+ AL
Sbjct: 238 HKLFVGNLSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEALS 297
Query: 127 SLNGVELEGRAMRVSLAQGRR 147
SLNG ELEGR +RV+LA G++
Sbjct: 298 SLNGTELEGREIRVNLALGKK 318
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+ GNL ++ + L Q+Y VLYD +GRSRG+ FV ST + E +++
Sbjct: 148 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 207
Query: 128 LNGVELEGRAMRVSLA 143
L+G GR MRV+ A
Sbjct: 208 LDGSLYSGRTMRVNFA 223
>gi|115449577|ref|NP_001048500.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|47847880|dbj|BAD21673.1| putative RNA-binding protein RNP1 precursor [Oryza sativa Japonica
Group]
gi|47848169|dbj|BAD21996.1| putative RNA-binding protein RNP1 precursor [Oryza sativa Japonica
Group]
gi|113538031|dbj|BAF10414.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|125584133|gb|EAZ25064.1| hypothetical protein OsJ_08857 [Oryza sativa Japonica Group]
gi|215695143|dbj|BAG90334.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737594|dbj|BAG96724.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 316
Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/141 (76%), Positives = 123/141 (87%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
VLYDR TGRSRGFAFVTMST+EDC VI+NLDG Y GR +RVNF+DKPKPKLPLY ET+
Sbjct: 176 VLYDRATGRSRGFAFVTMSTIEDCEQVIKNLDGSLYSGRTMRVNFADKPKPKLPLYPETE 235
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
KLFVGNLSW+VT+E LT+ FQ+ GNVVGARVLYDGE+GRSRGYGFVCYSTK EM+ AL
Sbjct: 236 HKLFVGNLSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEALS 295
Query: 127 SLNGVELEGRAMRVSLAQGRR 147
SLNG ELEGR +RV+LA G++
Sbjct: 296 SLNGTELEGREIRVNLALGKK 316
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+ GNL ++ + L Q+Y VLYD +GRSRG+ FV ST + E +++
Sbjct: 146 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 205
Query: 128 LNGVELEGRAMRVSLA 143
L+G GR MRV+ A
Sbjct: 206 LDGSLYSGRTMRVNFA 221
>gi|15218972|ref|NP_176208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|13194798|gb|AAK15561.1|AF348590_1 putative nucleic acid-binding protein [Arabidopsis thaliana]
gi|4249379|gb|AAD14476.1| Strong similarity to gb|X82030 chloroplast RNA binding protein
(RNP1) from Phaseolus vulgaris [Arabidopsis thaliana]
gi|21593720|gb|AAM65687.1| nucleic acid-binding protein, putative [Arabidopsis thaliana]
gi|222423361|dbj|BAH19654.1| AT1G60000 [Arabidopsis thaliana]
gi|332195527|gb|AEE33648.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 258
Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 108/142 (76%), Positives = 130/142 (91%), Gaps = 1/142 (0%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP-KLPLYAET 65
VLY+R+TG+SRGFAFVTMS VEDCN +I+NLDG EYLGR L+VNF+DKPKP K PLY ET
Sbjct: 116 VLYNRDTGQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVNFADKPKPNKEPLYPET 175
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+ KLFVGNLSW+VT+ESL AF+E G+VVGARV++DG++GRSRGYGFVCYS+KAEMETAL
Sbjct: 176 EHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETAL 235
Query: 126 ESLNGVELEGRAMRVSLAQGRR 147
ESL+G ELEGRA+RV+LAQG++
Sbjct: 236 ESLDGFELEGRAIRVNLAQGKK 257
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 51/85 (60%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A + KL+ GNL ++V + +L Q Q++ N VLY+ ++G+SRG+ FV S +
Sbjct: 81 AAVNTKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVEDCN 140
Query: 123 TALESLNGVELEGRAMRVSLAQGRR 147
+++L+G E GRA++V+ A +
Sbjct: 141 IIIDNLDGTEYLGRALKVNFADKPK 165
>gi|2104687|emb|CAA66479.1| RNA- or ssDNA-binding protein [Vicia faba var. minor]
Length = 289
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/144 (72%), Positives = 125/144 (86%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ VLYDR+TG+SRGFAF TM+ VEDC AVIENLDG+E++GR LRVNFSDKPK K LY E
Sbjct: 146 VEVLYDRDTGKSRGFAFATMTCVEDCKAVIENLDGKEFMGRTLRVNFSDKPKAKESLYPE 205
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
T++KLF+GNLSW VT+E LT+AFQE+G VVGARV+YDGE+G SRGYGFV Y+ K+EME A
Sbjct: 206 TEYKLFIGNLSWKVTSEILTEAFQEHGTVVGARVIYDGETGNSRGYGFVSYANKSEMEAA 265
Query: 125 LESLNGVELEGRAMRVSLAQGRRS 148
L +N VELEGRA+RVSLAQG+RS
Sbjct: 266 LTIMNDVELEGRALRVSLAQGKRS 289
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+T KL+ GNL +SV + L +EYG+ VLYD ++G+SRG+ F + + +
Sbjct: 114 DTRTKLYFGNLPYSVDSAKLAGLIEEYGSAELVEVLYDRDTGKSRGFAFATMTCVEDCKA 173
Query: 124 ALESLNGVELEGRAMRVSLA 143
+E+L+G E GR +RV+ +
Sbjct: 174 VIENLDGKEFMGRTLRVNFS 193
>gi|357137588|ref|XP_003570382.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 305
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/141 (74%), Positives = 121/141 (85%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
VLYDR TGRSRGFAFVTMST+EDC VI+NLDG Y GR +RVN +DKPKPK PLY ET+
Sbjct: 164 VLYDRTTGRSRGFAFVTMSTLEDCERVIKNLDGTLYSGRTMRVNMADKPKPKEPLYPETE 223
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
KLFVGNLSW+VT E LT AFQ+ G+VVGARVLYDGE+GRSRGYGFVCYSTK EM+ A+E
Sbjct: 224 HKLFVGNLSWTVTPEMLTDAFQQCGDVVGARVLYDGETGRSRGYGFVCYSTKEEMDQAIE 283
Query: 127 SLNGVELEGRAMRVSLAQGRR 147
+LNG E+EGR +RV+LA G+R
Sbjct: 284 TLNGTEIEGREIRVNLALGKR 304
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+ GNL ++ + L Q++ VLYD +GRSRG+ FV ST + E +++
Sbjct: 134 KLYFGNLPYNCDSALLAGIVQDHATPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKN 193
Query: 128 LNGVELEGRAMRVSLA 143
L+G GR MRV++A
Sbjct: 194 LDGTLYSGRTMRVNMA 209
>gi|326487400|dbj|BAJ89684.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511469|dbj|BAJ87748.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511763|dbj|BAJ92026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514088|dbj|BAJ92194.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527877|dbj|BAJ88990.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534068|dbj|BAJ89384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 306
Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 105/141 (74%), Positives = 120/141 (85%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
VLYDR TGRSRGFAFVTMST+EDC VI+NLDG Y GR +RVN +D+PKPK PLY ET+
Sbjct: 165 VLYDRTTGRSRGFAFVTMSTLEDCERVIKNLDGTLYSGRTMRVNMADRPKPKAPLYPETE 224
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
KLFVGNLSW+VT E LT AFQ GNVVGARVLYDGE+GRSRGYGFVCYSTK EM+ A+E
Sbjct: 225 HKLFVGNLSWTVTPEMLTDAFQRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDQAIE 284
Query: 127 SLNGVELEGRAMRVSLAQGRR 147
+LNG E+EGR +RV+LA G+R
Sbjct: 285 TLNGTEIEGREIRVNLALGKR 305
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+ GNL ++ + L Q++ VLYD +GRSRG+ FV ST + E +++
Sbjct: 135 KLYFGNLPYNCDSALLAGIVQDHAVPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKN 194
Query: 128 LNGVELEGRAMRVSLA 143
L+G GR MRV++A
Sbjct: 195 LDGTLYSGRTMRVNMA 210
>gi|326523287|dbj|BAJ88684.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 422
Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 105/141 (74%), Positives = 120/141 (85%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
VLYDR TGRSRGFAFVTMST+EDC VI+NLDG Y GR +RVN +D+PKPK PLY ET+
Sbjct: 281 VLYDRTTGRSRGFAFVTMSTLEDCERVIKNLDGTLYSGRTMRVNMADRPKPKAPLYPETE 340
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
KLFVGNLSW+VT E LT AFQ GNVVGARVLYDGE+GRSRGYGFVCYSTK EM+ A+E
Sbjct: 341 HKLFVGNLSWTVTPEMLTDAFQRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDQAIE 400
Query: 127 SLNGVELEGRAMRVSLAQGRR 147
+LNG E+EGR +RV+LA G+R
Sbjct: 401 TLNGTEIEGREIRVNLALGKR 421
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+ GNL ++ + L Q++ VLYD +GRSRG+ FV ST + E +++
Sbjct: 251 KLYFGNLPYNCDSALLAGIVQDHAVPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKN 310
Query: 128 LNGVELEGRAMRVSLA 143
L+G GR MRV++A
Sbjct: 311 LDGTLYSGRTMRVNMA 326
>gi|242063480|ref|XP_002453029.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
gi|241932860|gb|EES06005.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
Length = 295
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/141 (73%), Positives = 121/141 (85%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
VLYDR TGRSRGFAFVTM+TV+DC VI+NLDG Y GR ++VNF+D+PKPKLPLY ET+
Sbjct: 155 VLYDRITGRSRGFAFVTMTTVQDCELVIKNLDGSLYGGRTMKVNFADRPKPKLPLYPETE 214
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
KLFVGNLSW+VT+E LT+AF GNVVGARVLYDGE+GRSRGYGFVCYSTK EM+ A+
Sbjct: 215 HKLFVGNLSWTVTSEMLTEAFGRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEAIS 274
Query: 127 SLNGVELEGRAMRVSLAQGRR 147
SLNG ELEGR +RV+LA G +
Sbjct: 275 SLNGTELEGREIRVNLALGNK 295
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%)
Query: 52 SDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
S +P + T KL+ GNL ++ + L QEY + VLYD +GRSRG+
Sbjct: 109 SQDSRPSVAASTTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRITGRSRGFA 168
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
FV +T + E +++L+G GR M+V+ A
Sbjct: 169 FVTMTTVQDCELVIKNLDGSLYGGRTMKVNFA 200
>gi|255646669|gb|ACU23808.1| unknown [Glycine max]
Length = 125
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/125 (81%), Positives = 113/125 (90%)
Query: 24 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 83
MS +EDCNAVIENL+G+E+LGR LRVNFS KPKPK PLY ET+ KLFVGNLSWSVT E L
Sbjct: 1 MSCIEDCNAVIENLNGKEFLGRTLRVNFSSKPKPKEPLYPETEHKLFVGNLSWSVTNEIL 60
Query: 84 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
TQAFQEYG VVGARVLYDGE+GRSRGYGFVCYST+AEME A+ +LN VELEGRAMRVSLA
Sbjct: 61 TQAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTQAEMEAAVAALNDVELEGRAMRVSLA 120
Query: 144 QGRRS 148
QG+R+
Sbjct: 121 QGKRA 125
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
VLYD ETGRSRG+ FV ST + A + L+ E GR +RV+ +
Sbjct: 75 VLYDGETGRSRGYGFVCYSTQAEMEAAVAALNDVELEGRAMRVSLAQ 121
>gi|413939453|gb|AFW74004.1| hypothetical protein ZEAMMB73_282165 [Zea mays]
Length = 287
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/141 (71%), Positives = 120/141 (85%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
VLYDR TGRSRGFAFVTM+TV+DC VI+NLDG Y GR ++VNF+D+PKPK LY ET+
Sbjct: 147 VLYDRTTGRSRGFAFVTMTTVQDCELVIKNLDGSLYGGRTMKVNFADRPKPKQALYPETE 206
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
KLFVGNLSW+VT+E LT+AF G VVGARVLYDGE+GRSRGYGFVCYST+ EM+ AL
Sbjct: 207 HKLFVGNLSWTVTSEMLTEAFGRCGTVVGARVLYDGETGRSRGYGFVCYSTREEMDEALS 266
Query: 127 SLNGVELEGRAMRVSLAQGRR 147
SLNG+E+EGR MRV+LA G++
Sbjct: 267 SLNGMEMEGREMRVNLALGKK 287
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 52 SDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
SD P + + T KL+ GNL ++ + L QEY + VLYD +GRSRG+
Sbjct: 102 SDDSGPSVAA-STTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFA 160
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
FV +T + E +++L+G GR M+V+ A
Sbjct: 161 FVTMTTVQDCELVIKNLDGSLYGGRTMKVNFA 192
>gi|219363077|ref|NP_001137027.1| uncharacterized protein LOC100217196 [Zea mays]
gi|194698058|gb|ACF83113.1| unknown [Zea mays]
Length = 287
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/141 (71%), Positives = 120/141 (85%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
VLYDR TGRSRGFAFVTM+TV+DC VI+NLDG Y GR ++VNF+D+PKPK LY ET+
Sbjct: 147 VLYDRTTGRSRGFAFVTMTTVQDCELVIKNLDGSLYGGRTMKVNFADRPKPKQALYPETE 206
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
KLFVGNLSW+VT+E LT+AF G VVGARVLYDGE+GRSRGYGFVCYST+ EM+ AL
Sbjct: 207 HKLFVGNLSWTVTSEMLTEAFGRCGTVVGARVLYDGETGRSRGYGFVCYSTREEMDEALS 266
Query: 127 SLNGVELEGRAMRVSLAQGRR 147
SLNG+E+EGR MRV+LA G++
Sbjct: 267 SLNGMEMEGREMRVNLALGKK 287
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 52 SDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
SD P + + T KL+ GNL ++ + L QEY + VLYD +GRSRG+
Sbjct: 102 SDDSGPSVAA-STTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFA 160
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
FV +T + E +++L+G GR M+V+ A
Sbjct: 161 FVTMTTVQDCELVIKNLDGSLYGGRTMKVNFA 192
>gi|147859670|emb|CAN83111.1| hypothetical protein VITISV_026573 [Vitis vinifera]
Length = 355
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/99 (86%), Positives = 93/99 (93%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
VLYDR+TGRSRGFAFVTMS+VEDCNAVIENLDG EY GR LRVNFSDKPKPKLPLY ET+
Sbjct: 97 VLYDRDTGRSRGFAFVTMSSVEDCNAVIENLDGSEYGGRTLRVNFSDKPKPKLPLYPETE 156
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG 105
+KLFVGNLSWSVT+ESL Q FQEYGNV+GARVLYDGE+G
Sbjct: 157 YKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETG 195
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+ GNL +S + L Q YG+ VLYD ++GRSRG+ FV S+ + +E+
Sbjct: 67 KLYFGNLPYSCDSAHLAGIIQNYGSPELVEVLYDRDTGRSRGFAFVTMSSVEDCNAVIEN 126
Query: 128 LNGVELEGRAMRVSLA 143
L+G E GR +RV+ +
Sbjct: 127 LDGSEYGGRTLRVNFS 142
>gi|168988195|gb|ACA35266.1| nuclear transport family protein [Cucumis sativus]
Length = 565
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 80/98 (81%), Positives = 92/98 (93%)
Query: 43 LGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDG 102
+GRILRVNFSDKPKPK PLY ET++KLFVGNLSWSVT+E LTQAFQEYGNVVGARV+YDG
Sbjct: 1 MGRILRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDG 60
Query: 103 ESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 140
E+G+SRGYGFV YSTK+EMETALE++N +ELEGR +RV
Sbjct: 61 ETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRV 98
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
V+YD ETG+SRG+ FV+ ST + +E ++ E GR++RV
Sbjct: 56 VIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRV 98
>gi|294464377|gb|ADE77701.1| unknown [Picea sitchensis]
Length = 299
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/158 (49%), Positives = 107/158 (67%), Gaps = 14/158 (8%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS------------ 52
+ V+YD+ TGRSRGFAF TMS+VED NA++ENLDG +Y GR LRVN
Sbjct: 140 VEVIYDQNTGRSRGFAFATMSSVEDANALVENLDGSQYGGRTLRVNLREEASRSLRVNLR 199
Query: 53 DKPKPKLPLYAETD--FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 110
DK + + D ++++GNLSW V E L + F E+GN++ A++++D E+GRSRG+
Sbjct: 200 DKSRSEQRNQTNNDGQHRVYIGNLSWDVNEEILNEVFSEHGNLLDAKIVFDRETGRSRGF 259
Query: 111 GFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
GF+ +ST++E E A+ SLNG ELEGRAMRV LA R+
Sbjct: 260 GFITFSTQSEAEAAVASLNGKELEGRAMRVDLALSSRN 297
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 53 DKPKPKLPLY-AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
D P+ PL+ K+++GNL +S + L QE+G+V V+YD +GRSRG+
Sbjct: 96 DAPEISEPLHDIPAGTKVYLGNLPFSCDSAELAGIIQEHGSVEMVEVIYDQNTGRSRGFA 155
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSL 142
F S+ + +E+L+G + GR +RV+L
Sbjct: 156 FATMSSVEDANALVENLDGSQYGGRTLRVNL 186
>gi|116793682|gb|ABK26841.1| unknown [Picea sitchensis]
Length = 347
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 112/153 (73%), Gaps = 11/153 (7%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK---PKLPL 61
+ V+YDR +GRSRGFAFVTMSTVE+ A I+ +G E GR LRVNF + P+ + P
Sbjct: 188 VEVIYDRSSGRSRGFAFVTMSTVEEAEAAIKKFNGFEIDGRSLRVNFPEVPRLQNGRSPA 247
Query: 62 YAETDF--------KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
+ ++F K++VGNL+WSVT+E+L +A GNV+GA+V+ D E+GRSRG+GFV
Sbjct: 248 RSPSNFGGFVDSPHKVYVGNLAWSVTSETLREALNGKGNVLGAKVIQDRETGRSRGFGFV 307
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+S++AE+E A+ ++G+E+EGR++RV++A+ R
Sbjct: 308 SFSSEAEVEAAVSEMDGLEVEGRSIRVNVAKSR 340
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P LP KL+VGNL + + +E L + F E G V V+YD SGRSRG+ FV S
Sbjct: 153 PPLP----EGTKLYVGNLPFDIDSEGLAKMFDESGVVEMVEVIYDRSSGRSRGFAFVTMS 208
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGRR 147
T E E A++ NG E++GR++RV+ + R
Sbjct: 209 TVEEAEAAIKKFNGFEIDGRSLRVNFPEVPR 239
>gi|116781814|gb|ABK22250.1| unknown [Picea sitchensis]
Length = 355
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 112/153 (73%), Gaps = 11/153 (7%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK---PKLPL 61
+ V+YDR +GRSRGFAFVTMSTVE+ A I+ +G E GR LRVNF + P+ + P
Sbjct: 196 VEVIYDRSSGRSRGFAFVTMSTVEEAEAAIKKFNGFEIDGRSLRVNFPEVPRLQNGRSPA 255
Query: 62 YAETDF--------KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
+ ++F K++VGNL+WSVT+E+L +A GNV+GA+V+ D E+GRSRG+GFV
Sbjct: 256 RSPSNFGGFVDSPHKVYVGNLAWSVTSETLREALNGKGNVLGAKVIQDRETGRSRGFGFV 315
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+S++AE+E A+ ++G+E+EGR++RV++A+ R
Sbjct: 316 SFSSEAEVEAAVSEMDGLEVEGRSIRVNVAKSR 348
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P LP KL+VGNL + + +E L + F E G V V+YD SGRSRG+ FV S
Sbjct: 161 PPLP----EGTKLYVGNLPFDIDSEGLAKMFDESGVVEMVEVIYDRSSGRSRGFAFVTMS 216
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGRR 147
T E E A++ NG E++GR++RV+ + R
Sbjct: 217 TVEEAEAAIKKFNGFEIDGRSLRVNFPEVPR 247
>gi|168029395|ref|XP_001767211.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681466|gb|EDQ67892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 192
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 102/155 (65%), Gaps = 16/155 (10%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF--SDKPKPKLP-- 60
+ V+YD+E+GRSRGFAFVTM+T ED VIE LDG + GR L+V+F S + +P P
Sbjct: 29 VEVIYDQESGRSRGFAFVTMATQEDAENVIERLDGHDVGGRPLKVSFPQSKQNRPSFPRG 88
Query: 61 ------------LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSR 108
+ K+FVGNLSW V +L + F +YG VV ARV+YD ESGRSR
Sbjct: 89 EGYQRSERAPRPAARDDPNKVFVGNLSWGVDNGALQELFSDYGKVVDARVVYDRESGRSR 148
Query: 109 GYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
G+GFV YS +E++ A++SL+G E +GR +RV+LA
Sbjct: 149 GFGFVTYSDVSEVDAAIDSLDGAEFDGRELRVNLA 183
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL++GNL W + L QE+G+V V+YD ESGRSRG+ FV +T+ + E +E
Sbjct: 1 KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
L+G ++ GR ++VS Q +++
Sbjct: 61 LDGHDVGGRPLKVSFPQSKQN 81
>gi|255556984|ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223541388|gb|EEF42939.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 280
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 99/155 (63%), Gaps = 13/155 (8%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V+YD+ TGRSRGF FVTMS++++ A + +G E GR LRVN P+ +
Sbjct: 121 VEVIYDKVTGRSRGFGFVTMSSIDEVEAAAQQFNGYELEGRALRVNSGPPPQRESSFSRS 180
Query: 65 TDF-------------KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
F +L+VGNLSWSV +L F E G VV A+V+YD ESGRSRG+G
Sbjct: 181 PRFGGGGGGGESLEGNRLYVGNLSWSVDNLALESFFSEQGKVVDAKVVYDRESGRSRGFG 240
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
FV YS+ E+E A++SLNG EL+GRA+RVS+A+ R
Sbjct: 241 FVTYSSAEEVENAIDSLNGAELDGRAIRVSVAEAR 275
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 50/75 (66%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D KLFVGNL ++V + L F+ GNV V+YD +GRSRG+GFV S+ E+E A
Sbjct: 91 DLKLFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVEAAA 150
Query: 126 ESLNGVELEGRAMRV 140
+ NG ELEGRA+RV
Sbjct: 151 QQFNGYELEGRALRV 165
>gi|149392545|gb|ABR26075.1| chloroplast 29 kDa ribonucleoprotein [Oryza sativa Indica Group]
Length = 205
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 99/151 (65%), Gaps = 9/151 (5%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----PKL 59
+ V+YDR+TGRSRGF FVTMST E+ A IE +G + GR LRVN P P+
Sbjct: 50 VEVVYDRQTGRSRGFGFVTMSTAEEAGAAIEQFNGYTFQGRPLRVNSGPPPPRDDFAPRS 109
Query: 60 PLYAETDF----KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
P ++F KL+VGNL+W V +L F E G V+ A+V+YD ESGRSRG+GFV Y
Sbjct: 110 PRGGGSNFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTY 169
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ E+ A+ +L+GV+L+GR +RV++A+ +
Sbjct: 170 GSAEEVNNAISNLDGVDLDGRQIRVTVAESK 200
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
+AE D K+FVGNL +SV + L F++ G+V V+YD ++GRSRG+GFV ST E
Sbjct: 17 FAE-DLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEA 75
Query: 122 ETALESLNGVELEGRAMRVS 141
A+E NG +GR +RV+
Sbjct: 76 GAAIEQFNGYTFQGRPLRVN 95
>gi|125559266|gb|EAZ04802.1| hypothetical protein OsI_26976 [Oryza sativa Indica Group]
Length = 259
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 99/151 (65%), Gaps = 9/151 (5%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----PKL 59
+ V+YDR+TGRSRGF FVTMST E+ A +E +G + GR LRVN P P+
Sbjct: 104 VEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDFAPRS 163
Query: 60 PLYAETDF----KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
P ++F KL+VGNL+W V +L F E G V+ A+V+YD ESGRSRG+GFV Y
Sbjct: 164 PRGGGSNFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTY 223
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ E+ A+ +L+GV+L+GR +RV++A+ +
Sbjct: 224 GSAEEVNNAISNLDGVDLDGRQIRVTVAESK 254
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
+AE D K+FVGNL +SV + L F++ G+V V+YD ++GRSRG+GFV ST E
Sbjct: 71 FAE-DLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEA 129
Query: 122 ETALESLNGVELEGRAMRVS 141
A+E NG +GR +RV+
Sbjct: 130 GAAVEQFNGYTFQGRPLRVN 149
>gi|115473531|ref|NP_001060364.1| Os07g0631900 [Oryza sativa Japonica Group]
gi|22296371|dbj|BAC10140.1| putative 29 kDa ribonucleoprotein A, chloroplast precursor [Oryza
sativa Japonica Group]
gi|113611900|dbj|BAF22278.1| Os07g0631900 [Oryza sativa Japonica Group]
gi|125601192|gb|EAZ40768.1| hypothetical protein OsJ_25244 [Oryza sativa Japonica Group]
Length = 264
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 99/151 (65%), Gaps = 9/151 (5%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----PKL 59
+ V+YDR+TGRSRGF FVTMST E+ A +E +G + GR LRVN P P+
Sbjct: 109 VEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDFAPRS 168
Query: 60 PLYAETDF----KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
P ++F KL+VGNL+W V +L F E G V+ A+V+YD ESGRSRG+GFV Y
Sbjct: 169 PRGGGSNFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTY 228
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ E+ A+ +L+GV+L+GR +RV++A+ +
Sbjct: 229 GSAEEVNNAISNLDGVDLDGRQIRVTVAESK 259
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
+AE D K+FVGNL +SV + L F++ G+V V+YD ++GRSRG+GFV ST E
Sbjct: 76 FAE-DLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEA 134
Query: 122 ETALESLNGVELEGRAMRVS 141
A+E NG +GR +RV+
Sbjct: 135 GAAVEQFNGYTFQGRPLRVN 154
>gi|224140195|ref|XP_002323470.1| predicted protein [Populus trichocarpa]
gi|222868100|gb|EEF05231.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 102/148 (68%), Gaps = 8/148 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK--------PK 58
V+YD+ TGRSRGF FVTM+T+E+ A + +G E GR LRVNF P+ P+
Sbjct: 121 VIYDKVTGRSRGFGFVTMTTIEEVEAASKQFNGYELDGRTLRVNFGPPPQKESSFSRGPR 180
Query: 59 LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
++ +++VGNLSW+V +L F+E G V+ A+V+YD +SGRSRG+GFV YS+
Sbjct: 181 GGETFDSGNRVYVGNLSWNVDNLALETLFREKGRVMDAKVVYDRDSGRSRGFGFVTYSSA 240
Query: 119 AEMETALESLNGVELEGRAMRVSLAQGR 146
E++ A++SLNG EL+GRA+RVS+A+ +
Sbjct: 241 EEVDNAIDSLNGAELDGRAIRVSVAEAK 268
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D KLFVGNL ++V + L F+ GNV V+YD +GRSRG+GFV +T E+E A
Sbjct: 89 DLKLFVGNLPFNVDSARLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMTTIEEVEAAS 148
Query: 126 ESLNGVELEGRAMRVSL 142
+ NG EL+GR +RV+
Sbjct: 149 KQFNGYELDGRTLRVNF 165
>gi|116786296|gb|ABK24055.1| unknown [Picea sitchensis]
Length = 299
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 100/158 (63%), Gaps = 14/158 (8%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + V+YDR+TGRSRGFAFVTM+T D + +E +G EY GR LRVN S P PK
Sbjct: 139 VTMVEVIYDRQTGRSRGFAFVTMATQADADEAVEKFNGYEYQGRTLRVN-SGPPPPKDSF 197
Query: 62 YAETDFK-------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSR 108
F+ +FVGNL W SL Q F ++G V+ A+V+YD E+GRSR
Sbjct: 198 APRGGFRNEKPSGNYNSANRVFVGNLPWGADDLSLEQLFSDHGKVMEAKVVYDRETGRSR 257
Query: 109 GYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
G+GFV S+ E+E A+ SL+G +++GR ++V+LA+ +
Sbjct: 258 GFGFVTLSSPQEIEEAISSLDGSDMDGRQIKVTLAETK 295
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 53/76 (69%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+ K+FVGNL WSV + L + F++ G+V V+YD ++GRSRG+ FV +T+A+ + A+
Sbjct: 112 NLKVFVGNLPWSVDSAELAELFKDSGDVTMVEVIYDRQTGRSRGFAFVTMATQADADEAV 171
Query: 126 ESLNGVELEGRAMRVS 141
E NG E +GR +RV+
Sbjct: 172 EKFNGYEYQGRTLRVN 187
>gi|449437482|ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449528229|ref|XP_004171108.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 323
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 102/154 (66%), Gaps = 12/154 (7%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-------- 56
+ V+YD+ T RSRGFAFVTM+T+E+ I DG + GR +RVNF + P+
Sbjct: 144 VQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMG 203
Query: 57 PKL----PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
P++ + ++ K++ GNL W +T++SL AF+ ++ A+++YD SG+SRG+GF
Sbjct: 204 PRIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPGILSAKIIYDRASGKSRGFGF 263
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
V + T + E+ALES+NGVE+EGR +R+++A G+
Sbjct: 264 VSFETAEDAESALESMNGVEVEGRPLRLNIAAGQ 297
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 52/80 (65%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL++GNL +++T+ L++ F E G+VV +V+YD + RSRG+ FV +T E + A+
Sbjct: 116 KLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 175
Query: 128 LNGVELEGRAMRVSLAQGRR 147
+G ++ GR +RV+ + R
Sbjct: 176 FDGSQIGGRTVRVNFPEVPR 195
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
++YDR +G+SRGF FV+ T ED + +E+++G E GR LR+N + P P
Sbjct: 249 IIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAGQSPISP 302
>gi|242046410|ref|XP_002461076.1| hypothetical protein SORBIDRAFT_02g040260 [Sorghum bicolor]
gi|241924453|gb|EER97597.1| hypothetical protein SORBIDRAFT_02g040260 [Sorghum bicolor]
Length = 268
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 99/157 (63%), Gaps = 15/157 (9%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----PKL 59
+ V+YDR TGRSRGF FVTMS+ E+ A +E +G + GR LRVN P P+
Sbjct: 107 VEVVYDRMTGRSRGFGFVTMSSAEEAGAAVEQFNGYTFQGRPLRVNCGPPPPRDESAPRA 166
Query: 60 PL----------YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
P + ++ K++VGNL+W V +L F E G V+ A+V+YD ESGRSRG
Sbjct: 167 PRGGGGGGGGGSFVDSANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRESGRSRG 226
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+GFV Y T AE+ A+ +L+G++L+GR +RV++A+ +
Sbjct: 227 FGFVTYGTAAEVNNAISNLDGIDLDGRQIRVTVAESK 263
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D KLFVGNL +SV + L F++ G+V V+YD +GRSRG+GFV S+ E A+
Sbjct: 77 DLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAGAAV 136
Query: 126 ESLNGVELEGRAMRVS 141
E NG +GR +RV+
Sbjct: 137 EQFNGYTFQGRPLRVN 152
>gi|356533254|ref|XP_003535181.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 275
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 99/155 (63%), Gaps = 15/155 (9%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP--KPKLPLY-- 62
V+YD+ TGRSRGF FVTMS+VE+ A + +G E GR LRVN P P +
Sbjct: 117 VIYDKTTGRSRGFGFVTMSSVEEAEAAAQQFNGYELDGRALRVNSGPPPARNESAPRFRG 176
Query: 63 -----------AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
++++ ++ V NL+W V +L F+E GNV+ ARV+YD ESGRSRG+G
Sbjct: 177 GSSFGSRGGGPSDSENRVHVSNLAWGVDNVALKSLFREQGNVLEARVIYDRESGRSRGFG 236
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
FV +S+ E+ +A++SLNGV+L GRA+RVSLA +
Sbjct: 237 FVTFSSPDEVNSAIQSLNGVDLNGRAIRVSLADSK 271
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 51 FSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 110
FSD P D KLFVGNL ++V + L + F+ GNV V+YD +GRSRG+
Sbjct: 74 FSDGDGPSF----SPDLKLFVGNLPFNVDSAQLAELFESAGNVEVVEVIYDKTTGRSRGF 129
Query: 111 GFVCYSTKAEMETALESLNGVELEGRAMRVS 141
GFV S+ E E A + NG EL+GRA+RV+
Sbjct: 130 GFVTMSSVEEAEAAAQQFNGYELDGRALRVN 160
>gi|388506424|gb|AFK41278.1| unknown [Lotus japonicus]
Length = 199
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 99/151 (65%), Gaps = 12/151 (7%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-------- 56
+ V+YDR T RSRGFAFVTM +V+D I DG + GRI+RVNF + PK
Sbjct: 19 VEVMYDRVTDRSRGFAFVTMGSVDDAKEAIRMFDGSQVGGRIVRVNFPEVPKGGERLVMG 78
Query: 57 PKLPL----YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
PK+ + ++ K++ GNL W V+++ L F E +V A+V+Y+ +SGRSRG+GF
Sbjct: 79 PKIRNNNRDFVDSSHKIYAGNLGWRVSSQDLKDVFAEQPGLVSAKVIYERDSGRSRGFGF 138
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLA 143
V + T ++E AL+++NGVE++GR +R++LA
Sbjct: 139 VTFETAQDVEAALKTMNGVEVQGRELRLNLA 169
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
L V+Y+R++GRSRGF FVT T +D A ++ ++G E GR LR+N + P P
Sbjct: 119 LVSAKVIYERDSGRSRGFGFVTFETAQDVEAALKTMNGVEVQGRELRLNLAAVKAPSSPS 178
Query: 62 YAE 64
E
Sbjct: 179 VTE 181
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 78 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 137
+T+ LT+ F E G VV V+YD + RSRG+ FV + + + A+ +G ++ GR
Sbjct: 1 MTSSQLTEIFVEAGTVVSVEVMYDRVTDRSRGFAFVTMGSVDDAKEAIRMFDGSQVGGRI 60
Query: 138 MRVSLAQ 144
+RV+ +
Sbjct: 61 VRVNFPE 67
>gi|168054234|ref|XP_001779537.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669018|gb|EDQ55613.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 194
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 104/168 (61%), Gaps = 29/168 (17%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK--- 58
+ + V+YD+++GRSRGFAFVTMST E +VI+ LDG ++ GR L+V+F P+P+
Sbjct: 26 VEAVDVVYDQQSGRSRGFAFVTMSTNEGAQSVIDRLDGSDFGGRPLKVSF---PQPRENR 82
Query: 59 --LPLYAETD---------------------FKLFVGNLSWSVTTESLTQAFQEYGNVVG 95
P + + K+F+GNLSWS ++L Q F EYG+VV
Sbjct: 83 DNKPRFGNNERGDRRSDRPPRQGSDRVLDNTNKMFIGNLSWSCDADALVQVFSEYGSVVD 142
Query: 96 ARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
A+V+YD ++G+SRG+GFV S +E+ A+++L+G E EGR MRVS A
Sbjct: 143 AKVVYDRDTGKSRGFGFVTMSAASEVSNAVQNLDGAEFEGREMRVSEA 190
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGNL W+ + L + + +V V+YD +SGRSRG+ FV ST ++ ++
Sbjct: 1 KLYVGNLPWTCDSAQLAEICGDISSVEAVDVVYDQQSGRSRGFAFVTMSTNEGAQSVIDR 60
Query: 128 LNGVELEGRAMRVSLAQGR 146
L+G + GR ++VS Q R
Sbjct: 61 LDGSDFGGRPLKVSFPQPR 79
>gi|116790996|gb|ABK25816.1| unknown [Picea sitchensis]
Length = 248
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 102/149 (68%), Gaps = 8/149 (5%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+ K V+YD+ T RSR FAFVTMSTVED A IE ++G E GR+++VN ++KP L
Sbjct: 99 VEKAEVMYDKYTKRSRRFAFVTMSTVEDAQAAIEKMNGTEIGGRVIKVNITEKPLDVSGL 158
Query: 62 --------YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
+ ++ +K++VGNL+ +VTTE+L + F E GNV+ A+V E+G+S GYGFV
Sbjct: 159 NRLTEEAEFIDSPYKVYVGNLAKAVTTETLKKKFAEKGNVLDAKVTRIPETGKSGGYGFV 218
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSL 142
+S++A++E A+ + N V LEG+ MRV++
Sbjct: 219 SFSSEADVEAAISAFNNVVLEGKPMRVNV 247
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
E + +L+VGN+ + T E L + F E GNV A V+YD + RSR + FV ST + +
Sbjct: 70 EIERRLYVGNIPRTSTNEELAKIFGECGNVEKAEVMYDKYTKRSRRFAFVTMSTVEDAQA 129
Query: 124 ALESLNGVELEGRAMRVSLAQ 144
A+E +NG E+ GR ++V++ +
Sbjct: 130 AIEKMNGTEIGGRVIKVNITE 150
>gi|224069480|ref|XP_002326357.1| predicted protein [Populus trichocarpa]
gi|222833550|gb|EEE72027.1| predicted protein [Populus trichocarpa]
Length = 286
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 102/163 (62%), Gaps = 22/163 (13%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----PKL 59
+ V YD+ TGRSRGF FVTMST+E+ A + +G E GR LRVN P+ +L
Sbjct: 120 VEVKYDKVTGRSRGFGFVTMSTIEEVEAASQQFNGYELDGRPLRVNSGPPPQRETSFSRL 179
Query: 60 PLYAETDF----------------KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE 103
P E F +++VGNLSW+V +L F+E G V+ A+V+YD +
Sbjct: 180 P-QRENSFSRGPGARGGETFDSSNRVYVGNLSWNVDDSALESLFREKGKVMDAKVVYDRD 238
Query: 104 SGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
SGRS+G+GFV YS+ E+E A++SLNG EL+GRA+RVS+A+ +
Sbjct: 239 SGRSKGFGFVTYSSAEEVEDAVDSLNGAELDGRAIRVSVAEAK 281
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D +LFVGNL ++V + L F+ GNV V YD +GRSRG+GFV ST E+E A
Sbjct: 90 DLQLFVGNLPFNVNSAQLADLFKSAGNVEMVEVKYDKVTGRSRGFGFVTMSTIEEVEAAS 149
Query: 126 ESLNGVELEGRAMRVS 141
+ NG EL+GR +RV+
Sbjct: 150 QQFNGYELDGRPLRVN 165
>gi|357121842|ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 275
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 97/154 (62%), Gaps = 14/154 (9%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----PKLPL 61
V+YDR TGRSRGF FVTMST E+ +A +E +G + GR LRVN P P+ P
Sbjct: 115 VVYDRMTGRSRGFGFVTMSTAEEVSAAVEQFNGYTFQGRPLRVNSGPPPPRDEFAPRTPR 174
Query: 62 YA---------ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
++ KL+VGNLSW V +L F E G V+ A+V+YD +SGRSRG+GF
Sbjct: 175 GMGGGGGGGSFDSGNKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGF 234
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
V Y + E+ A+ +L+GV+L+GR +RV++A+ +
Sbjct: 235 VTYGSADEVNNAISNLDGVDLDGRQIRVTVAESK 268
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
Y+E D KLFVGNL ++V + L F++ G+V V+YD +GRSRG+GFV ST E+
Sbjct: 80 YSE-DLKLFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSTAEEV 138
Query: 122 ETALESLNGVELEGRAMRVS 141
A+E NG +GR +RV+
Sbjct: 139 SAAVEQFNGYTFQGRPLRVN 158
>gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
Length = 300
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 97/147 (65%), Gaps = 11/147 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPKPKL 59
V+Y+RET +SRGF FVTMSTVE+ +E + + GR+L VN + D+P
Sbjct: 152 VIYNRETDQSRGFGFVTMSTVEEAEKAVEMFNRYDINGRLLTVNKAAPRGARVDRP---- 207
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
P E F+++VGNL W V L Q F E+G VV ARV+YD E+GRSRG+GFV ST+
Sbjct: 208 PRAFEPAFRMYVGNLPWQVDDARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSTQT 267
Query: 120 EMETALESLNGVELEGRAMRVSLAQGR 146
E++ A+ +L+G L+GRA+RV++A+ R
Sbjct: 268 ELDDAIAALDGQSLDGRAIRVNVAEDR 294
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
PL E + KLFVGNL + V ++L + F + G V A V+Y+ E+ +SRG+GFV ST
Sbjct: 115 PLPPE-EAKLFVGNLPYDVDHQALAELFDQAGTVEVAEVIYNRETDQSRGFGFVTMSTVE 173
Query: 120 EMETALESLNGVELEGRAMRVSLAQGR 146
E E A+E N ++ GR + V+ A R
Sbjct: 174 EAEKAVEMFNRYDINGRLLTVNKAAPR 200
>gi|242048440|ref|XP_002461966.1| hypothetical protein SORBIDRAFT_02g011330 [Sorghum bicolor]
gi|241925343|gb|EER98487.1| hypothetical protein SORBIDRAFT_02g011330 [Sorghum bicolor]
Length = 294
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 97/147 (65%), Gaps = 11/147 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPKPKL 59
V+Y+RET RSRGF FVTMSTVE+ + +E L + GR+L VN + D+P
Sbjct: 147 VIYNRETDRSRGFGFVTMSTVEEADKAVEMLHRYDVNGRLLTVNKAAPRGSRVDRP---- 202
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
P + +++VGNL W V L Q F E+G VV ARV+YD E+GRSRG+GFV +T+
Sbjct: 203 PRQSGPSLRIYVGNLPWQVDDSKLVQMFSEHGKVVDARVVYDRETGRSRGFGFVTMATQD 262
Query: 120 EMETALESLNGVELEGRAMRVSLAQGR 146
E++ A+ +L+G L+GRA+RV++A+ R
Sbjct: 263 ELDDAIAALDGQSLDGRALRVNVAEER 289
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + V +E L Q F++ G V A V+Y+ E+ RSRG+GFV ST E + A+E
Sbjct: 117 KVYVGNLPYDVDSERLAQLFEQAGVVEVAEVIYNRETDRSRGFGFVTMSTVEEADKAVEM 176
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
L+ ++ GR + V+ A R S
Sbjct: 177 LHRYDVNGRLLTVNKAAPRGS 197
>gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
lyrata]
gi|297311615|gb|EFH42039.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
lyrata]
Length = 291
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 97/144 (67%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+Y+R+T +SRGF FVTMSTVE+ +E + E GR+L VN + +P+ + P
Sbjct: 144 VIYNRDTDQSRGFGFVTMSTVEEAKKAVEKFNRYEVNGRLLTVNIAAPRGSRPE-RQPRQ 202
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
+ F+++VGNL W V + L Q F E+G VV ARV+YD E+GRSRG+GFV S + E+
Sbjct: 203 YDAAFRIYVGNLPWDVDNDRLQQVFSEHGKVVDARVVYDRETGRSRGFGFVTMSNENEVN 262
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G LEGRA++V++A+ R
Sbjct: 263 DAIAALDGQNLEGRAIKVNVAEER 286
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 58 KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
K P E + KLFVGNL + V +++L F++ G V + V+Y+ ++ +SRG+GFV ST
Sbjct: 105 KFPEPPE-EAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMST 163
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQGRRS 148
E + A+E N E+ GR + V++A R S
Sbjct: 164 VEEAKKAVEKFNRYEVNGRLLTVNIAAPRGS 194
>gi|302754352|ref|XP_002960600.1| hypothetical protein SELMODRAFT_25552 [Selaginella moellendorffii]
gi|302771648|ref|XP_002969242.1| hypothetical protein SELMODRAFT_15428 [Selaginella moellendorffii]
gi|300162718|gb|EFJ29330.1| hypothetical protein SELMODRAFT_15428 [Selaginella moellendorffii]
gi|300171539|gb|EFJ38139.1| hypothetical protein SELMODRAFT_25552 [Selaginella moellendorffii]
Length = 197
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 90/152 (59%), Gaps = 15/152 (9%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK---------- 56
V+YDR G+SRGFAFVT+ST + IE LDG E GR LRVN+ P+
Sbjct: 49 VMYDRMLGKSRGFAFVTLSTEDAAKTAIEKLDGHELEGRPLRVNYPQVPRGGGGFGGGFG 108
Query: 57 --PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
P +P K FV N+ WSV + L + F +G VV R+L D ESGRSRG GFV
Sbjct: 109 TRPSIPANPA---KCFVANIPWSVDDQGLQEFFSSHGTVVDCRILTDAESGRSRGIGFVT 165
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
++T E A+ +L+G EL GR++RV+LA GR
Sbjct: 166 FATPDEANNAISALDGAELGGRSIRVALATGR 197
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 50 NFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
+F +P P KL+VGN++W+V ++ L F G V+YD G+SRG
Sbjct: 9 SFRSEPAPNT--------KLYVGNIAWNVDSKMLADCFNGVGITELEEVMYDRMLGKSRG 60
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRR 147
+ FV ST+ +TA+E L+G ELEGR +RV+ Q R
Sbjct: 61 FAFVTLSTEDAAKTAIEKLDGHELEGRPLRVNYPQVPR 98
>gi|168054274|ref|XP_001779557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669038|gb|EDQ55633.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 98/152 (64%), Gaps = 13/152 (8%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF--SDKPKPKL--- 59
+ V+YD+ +GRSRGFAFVTM++ +D A+I LDG + GR L+VNF S K KP+
Sbjct: 52 VEVIYDKLSGRSRGFAFVTMASHDDAQALINALDGSDMGGRALKVNFPQSQKDKPRFEKS 111
Query: 60 ---PLYAE-----TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
P A+ KLFVGN+ W ++T F YG+VV A+++YD +SGRSRG+G
Sbjct: 112 EARPPTADRRPRDDPNKLFVGNIPWGCDEAAMTSLFSPYGSVVDAKIVYDRDSGRSRGFG 171
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
FV + +TA+E+L+G EL+GR +RV+ A
Sbjct: 172 FVTMEKVGDAQTAMENLDGTELDGRELRVNFA 203
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 50/80 (62%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL W+ + L + ++G V V+YD SGRSRG+ FV ++ + + + +
Sbjct: 24 KVYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFVTMASHDDAQALINA 83
Query: 128 LNGVELEGRAMRVSLAQGRR 147
L+G ++ GRA++V+ Q ++
Sbjct: 84 LDGSDMGGRALKVNFPQSQK 103
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP 57
++YDR++GRSRGF FVTM V D +ENLDG E GR LRVNF+ + P
Sbjct: 158 IVYDRDSGRSRGFGFVTMEKVGDAQTAMENLDGTELDGRELRVNFAGEKPP 208
>gi|168033890|ref|XP_001769447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679367|gb|EDQ65816.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/144 (50%), Positives = 96/144 (66%), Gaps = 5/144 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLP 60
+ V+YD+ +GRSRGFAFVTM+T ED AVI LDG + GR L+VN+ DKP+ +
Sbjct: 73 VEVIYDKISGRSRGFAFVTMATPEDAQAVINALDGTDMGGRPLKVNYPQSQKDKPRVERS 132
Query: 61 LYAETDF-KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
D KLFVGNLSW +L F EYG VV A+V++D +SGRSRG+GFV + A
Sbjct: 133 ERPRDDANKLFVGNLSWGCDEAALYSFFSEYGTVVDAKVVFDRDSGRSRGFGFVTMESAA 192
Query: 120 EMETALESLNGVELEGRAMRVSLA 143
A+E+L+G EL+GR +RV+LA
Sbjct: 193 AANAAIENLDGAELDGRRLRVNLA 216
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 60 PLYAETDF--KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
P+ E F KL+VGNL W+ + L + ++G V V+YD SGRSRG+ FV +T
Sbjct: 35 PVAEEEQFETKLYVGNLPWTCDSAQLAEICSDHGTVDVVEVIYDKISGRSRGFAFVTMAT 94
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQGRR 147
+ + + +L+G ++ GR ++V+ Q ++
Sbjct: 95 PEDAQAVINALDGTDMGGRPLKVNYPQSQK 124
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP 57
V++DR++GRSRGF FVTM + NA IENLDG E GR LRVN + + P
Sbjct: 171 VVFDRDSGRSRGFGFVTMESAAAANAAIENLDGAELDGRRLRVNLAGEKPP 221
>gi|1015370|gb|AAA79045.1| 24 kDa RNA binding protein, partial [Spinacia oleracea]
Length = 220
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 99/149 (66%), Gaps = 6/149 (4%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP-LYA 63
+ V+YD+ TGRSRGF FVTMS+VE+ A + + E GR LRV LP + +
Sbjct: 67 VEVIYDKLTGRSRGFGFVTMSSVEEVEAAAQQFNNYELDGRTLRVTEDSHKDMTLPRVES 126
Query: 64 ETDF-----KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
E D ++ VGNLSW V ++L F E G+VV A+V+YD ++GRSRG+GFV Y++
Sbjct: 127 ECDSFGSSNRVHVGNLSWKVDDDALKTLFSETGDVVEAKVIYDRDTGRSRGFGFVTYNSA 186
Query: 119 AEMETALESLNGVELEGRAMRVSLAQGRR 147
E+ TA+ESL+GV+L GR++RV+ A+ R+
Sbjct: 187 NEVNTAIESLDGVDLNGRSIRVTAAEARQ 215
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 53 DKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
D + P ++ D K+FVGNL ++V + L F G V V+YD +GRSRG+GF
Sbjct: 25 DDDAGRQPNFS-PDLKIFVGNLPFNVDSAELAGLFGAAGTVEMVEVIYDKLTGRSRGFGF 83
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVS 141
V S+ E+E A + N EL+GR +RV+
Sbjct: 84 VTMSSVEEVEAAAQQFNNYELDGRTLRVT 112
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
V+YDR+TGRSRGF FVT ++ + N IE+LDG + GR +RV ++ + + P
Sbjct: 166 VIYDRDTGRSRGFGFVTYNSANEVNTAIESLDGVDLNGRSIRVTAAEARQRRGP 219
>gi|414887732|tpg|DAA63746.1| TPA: hypothetical protein ZEAMMB73_977373 [Zea mays]
Length = 267
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 98/157 (62%), Gaps = 15/157 (9%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----PKL 59
+ V+YDR TGRSRGF FVTMS+ E+ A +E +G + GR LRVN P P+
Sbjct: 106 VEVVYDRMTGRSRGFGFVTMSSAEEAGAAVEQFNGYTFQGRPLRVNCGPPPPRDGSAPRA 165
Query: 60 PL----------YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
P + ++ K++VGNL+W V +L F E G V+ A+V+YD +SGRSRG
Sbjct: 166 PRGGGGGGGGGSFVDSGNKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRG 225
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+GFV Y + E+ A+ +L+G++L+GR +RV++A+ +
Sbjct: 226 FGFVTYGSAEEVNNAISNLDGIDLDGRQIRVTVAESK 262
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D KLFVGNL +SV + L F++ G+V V+YD +GRSRG+GFV S+ E A+
Sbjct: 76 DLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAGAAV 135
Query: 126 ESLNGVELEGRAMRVS 141
E NG +GR +RV+
Sbjct: 136 EQFNGYTFQGRPLRVN 151
>gi|356508744|ref|XP_003523114.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 305
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 95/145 (65%), Gaps = 5/145 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD----KPKPKLPLY 62
V+Y+RET +SRGF FVTMSTVE+ +E ++ GR+L VN + +P+ P +
Sbjct: 155 VIYNRETDQSRGFGFVTMSTVEEAENAVEKFSRYDFDGRLLTVNKASPRGTRPERPPPRH 214
Query: 63 A-ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
+ E ++VGNL W V L Q F E+GNVV ARV+YD E+ RSRG+GFV S + EM
Sbjct: 215 SFEPSLSIYVGNLPWDVDNTRLEQIFSEHGNVVNARVVYDRETRRSRGFGFVTMSDETEM 274
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
+ A+ +L+G L+GR +RVS+A+ R
Sbjct: 275 KDAVAALDGQSLDGRPIRVSVAEDR 299
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNL + V ++ L F++ G V A V+Y+ E+ +SRG+GFV ST E E A+E
Sbjct: 125 KLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAENAVEK 184
Query: 128 LNGVELEGRAMRVSLAQGR 146
+ + +GR + V+ A R
Sbjct: 185 FSRYDFDGRLLTVNKASPR 203
>gi|326510421|dbj|BAJ87427.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510771|dbj|BAJ91733.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 97/156 (62%), Gaps = 14/156 (8%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----PKL 59
+ V+YDR TGRSRGF FVTM +VE+ A +E +G + GR LRVN P P+
Sbjct: 116 VEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRVNSGPPPPRDEFAPRT 175
Query: 60 PLYA---------ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 110
P ++ KL+VGNLSW V +L F E G V+ A+V+YD +SGRSRG+
Sbjct: 176 PRAMGGGGGGGSFDSANKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGF 235
Query: 111 GFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
GFV Y + E+ A+ +L+GV+L+GR +RV++A+ +
Sbjct: 236 GFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAESK 271
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
Y+E D K+FVGNL ++V + L F++ G+V V+YD +GRSRG+GFV + E+
Sbjct: 83 YSE-DLKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEV 141
Query: 122 ETALESLNGVELEGRAMRVS 141
A+E NG +GR +RV+
Sbjct: 142 AAAVEQFNGYTFQGRPLRVN 161
>gi|99029149|gb|ABF60862.1| GRSF [Lilium longiflorum]
Length = 207
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 96/142 (67%), Gaps = 2/142 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAE 64
V+Y+RET +SRGF FVTMSTVE+ +E L + GR L VN + +P+ P ++
Sbjct: 60 VIYNRETDQSRGFGFVTMSTVEEAERAVEMLHRYDINGRNLTVNKAAPRGSRPERPRESD 119
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+++VGNL W V L Q F E+G V+ ARV+YD +SGRSRG+GFV +T+ E++ A
Sbjct: 120 PSLRVYVGNLPWQVDDSRLEQLFSEHGKVIDARVVYDRQSGRSRGFGFVTLATREEVDDA 179
Query: 125 LESLNGVELEGRAMRVSLAQGR 146
+ +L+G LEGRA+RV++A+ R
Sbjct: 180 IAALDGQSLEGRALRVNVAEER 201
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGN+ + +E L F + G V A V+Y+ E+ +SRG+GFV ST E E A+E
Sbjct: 31 KLFVGNIPYD-DSEKLANLFDKAGVVEVAEVIYNRETDQSRGFGFVTMSTVEEAERAVEM 89
Query: 128 LNGVELEGRAMRVSLAQGR 146
L+ ++ GR + V+ A R
Sbjct: 90 LHRYDINGRNLTVNKAAPR 108
>gi|356505441|ref|XP_003521499.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 314
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 98/157 (62%), Gaps = 12/157 (7%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + ++YDR T RSRGFAFVTM VED I DG + GR ++VNF + PK L
Sbjct: 131 VASVEIMYDRVTDRSRGFAFVTMGNVEDAKEAIRMFDGSQVGGRTVKVNFPEVPKGGERL 190
Query: 62 ------------YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
+ ++ K++ GNL W +T++ L +AF E V+ A+V+Y+ +SGRSRG
Sbjct: 191 VMGSKIRNSYRGFVDSPHKIYAGNLGWGLTSQGLREAFAEQPGVLSAKVIYERDSGRSRG 250
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+GFV + T + AL+ +NGVE++GR +R++LA+ R
Sbjct: 251 FGFVSFETAESAQAALDIMNGVEVQGRPLRLNLAEAR 287
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+VGNL +S+T +L + F E G V ++YD + RSRG+ FV + + A+
Sbjct: 106 RLYVGNLPYSITNSALAELFGEAGTVASVEIMYDRVTDRSRGFAFVTMGNVEDAKEAIRM 165
Query: 128 LNGVELEGRAMRVSLAQ 144
+G ++ GR ++V+ +
Sbjct: 166 FDGSQVGGRTVKVNFPE 182
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
V+Y+R++GRSRGF FV+ T E A ++ ++G E GR LR+N ++ P P
Sbjct: 239 VIYERDSGRSRGFGFVSFETAESAQAALDIMNGVEVQGRPLRLNLAEARAPSSP 292
>gi|226532108|ref|NP_001142375.1| uncharacterized protein LOC100274547 [Zea mays]
gi|194708524|gb|ACF88346.1| unknown [Zea mays]
Length = 163
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 98/157 (62%), Gaps = 15/157 (9%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----PKL 59
+ V+YDR TGRSRGF FVTMS+ E+ A +E +G + GR LRVN P P+
Sbjct: 2 VEVVYDRMTGRSRGFGFVTMSSAEEAGAAVEQFNGYTFQGRPLRVNCGPPPPRDGSAPRA 61
Query: 60 PL----------YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
P + ++ K++VGNL+W V +L F E G V+ A+V+YD +SGRSRG
Sbjct: 62 PRGGGGGGGGGSFVDSGNKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRG 121
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+GFV Y + E+ A+ +L+G++L+GR +RV++A+ +
Sbjct: 122 FGFVTYGSAEEVNNAISNLDGIDLDGRQIRVTVAESK 158
>gi|148907319|gb|ABR16796.1| unknown [Picea sitchensis]
Length = 387
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 92/142 (64%), Gaps = 4/142 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+ + ETG SRGFAFVTMSTV++ + IE L G + GR + VNF K K Y
Sbjct: 125 VVRNEETGISRGFAFVTMSTVKEAKSAIEKLQGSDLGGRDMIVNFPAKVLSKKKETDDSY 184
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
ET ++LFVGNL+WSV E L F ++GNV A+V+Y G+ G R +GFVC S+++EME
Sbjct: 185 IETPYQLFVGNLAWSVKKEILKSLFSQHGNVSAAKVIYSGKGGVPRAFGFVCLSSQSEME 244
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+ SL+G E GR ++V A+
Sbjct: 245 DAIVSLHGKEFHGRNLKVRQAR 266
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 25/168 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN----------F 51
+S V+Y + G R F FV +S+ + I +L G+E+ GR L+V
Sbjct: 215 VSAAKVIYSGKGGVPRAFGFVCLSSQSEMEDAIVSLHGKEFHGRNLKVRQARPTSKDMVV 274
Query: 52 SD------KPKPKL---------PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 96
SD KP + + + + ++V NLS SV ++L++ F ++GNV+ A
Sbjct: 275 SDVEENIAKPSTMVEDSMTETVKATFVGSAYGVYVSNLSLSVKNKALSELFSQHGNVLDA 334
Query: 97 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
RVLY ++GRSR YGFV +S++AE+E A+ +L+ E R + V A+
Sbjct: 335 RVLYARKAGRSRPYGFVNFSSQAEVEAAIAALDKKEFYERKLVVKEAK 382
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 46/75 (61%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGNL S LTQ FQE+G V V+ + E+G SRG+ FV ST E ++A+E
Sbjct: 95 KLYVGNLPRSCDIAQLTQLFQEFGTVESVEVVRNEETGISRGFAFVTMSTVKEAKSAIEK 154
Query: 128 LNGVELEGRAMRVSL 142
L G +L GR M V+
Sbjct: 155 LQGSDLGGRDMIVNF 169
>gi|225463276|ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Vitis
vinifera]
Length = 311
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 101/152 (66%), Gaps = 12/152 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK--------PK 58
++YDR T RSRGFAFVTM +V++ I DG + GR ++VNF + P+ PK
Sbjct: 134 IVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPK 193
Query: 59 LPL----YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
+ + ++ +K++ GNLSW +T+E L AF ++ ++GA+V+Y+ ESGRSRG+GF+
Sbjct: 194 IRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADHPGLLGAKVIYERESGRSRGFGFLS 253
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+++ E+AL ++N VE+EGR +R++LA R
Sbjct: 254 FASAENAESALNAMNEVEVEGRPLRLNLAAVR 285
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
PK+ AE +L+VGNL +S+T+ L F E G+V+ ++YD + RSRG+ FV
Sbjct: 94 PKVSDSAEAS-RLYVGNLPYSMTSSQLGDVFNEAGSVISVEIVYDRVTDRSRGFAFVTMG 152
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGRR 147
+ E + A+ +G ++ GR ++V+ + R
Sbjct: 153 SVQEAKEAIRMFDGSQVGGRTVKVNFPEVPR 183
>gi|12230584|sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
Full=CP29A; Flags: Precursor
gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris]
Length = 273
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 97/152 (63%), Gaps = 10/152 (6%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK------ 58
+ V+YD+ TGRSRGF FVTMS+ E+ A + +G E GR LRVN P+ +
Sbjct: 116 VEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFR 175
Query: 59 ----LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
++ +++VGNL+W V ++L F E G VV A+V+YD +SGRSRG+GFV
Sbjct: 176 GGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVT 235
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
YS+ E+ A+ESL+GV+L GRA+RVS A+ R
Sbjct: 236 YSSAEEVNNAIESLDGVDLNGRAIRVSPAEAR 267
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 53/76 (69%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D K+FVGNL +S + +L + F+ GNV V+YD +GRSRG+GFV S+K E+E A
Sbjct: 86 DLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAAC 145
Query: 126 ESLNGVELEGRAMRVS 141
+ NG EL+GRA+RV+
Sbjct: 146 QQFNGYELDGRALRVN 161
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDR++GRSRGF FVT S+ E+ N IE+LDG + GR +RV+ ++ P+
Sbjct: 219 VVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPR 270
>gi|242035621|ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 96/146 (65%), Gaps = 5/146 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V+YD+ TGRSRGF FVTMS+V++ A +E +G GR LRVN S P P+ P
Sbjct: 112 VEVIYDKLTGRSRGFGFVTMSSVQEVEAAVEQFNGYVLDGRSLRVN-SGPPPPRDPSSQR 170
Query: 65 TD----FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+++VGNLSW V +L F E G V+ AR++YD ESGRSRG+GFV Y + E
Sbjct: 171 GPRGDANRVYVGNLSWGVDNSALANLFSEQGEVLEARIVYDRESGRSRGFGFVTYGSAEE 230
Query: 121 METALESLNGVELEGRAMRVSLAQGR 146
+E A+ +L+G +L+GR +RV++A+ +
Sbjct: 231 VENAISNLDGSDLDGRQIRVTVAESK 256
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D ++FVGNL +SV + L F++ G+V V+YD +GRSRG+GFV S+ E+E A+
Sbjct: 82 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVQEVEAAV 141
Query: 126 ESLNGVELEGRAMRVS 141
E NG L+GR++RV+
Sbjct: 142 EQFNGYVLDGRSLRVN 157
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
++YDRE+GRSRGF FVT + E+ I NLDG + GR +RV ++ P+
Sbjct: 208 IVYDRESGRSRGFGFVTYGSAEEVENAISNLDGSDLDGRQIRVTVAESKPPR 259
>gi|17432522|gb|AAL39067.1|AF389431_1 single-stranded DNA binding protein precursor [Solanum tuberosum]
Length = 289
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 96/156 (61%), Gaps = 14/156 (8%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V+YD+ TGRSRGF FVTMS+ E A + +G E GR LRVN P + + +
Sbjct: 128 VEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQFNGYEIDGRALRVNSGPAPPKRENSFGD 187
Query: 65 --------------TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 110
+ +++VGNL+WSV + L F E G VV A+V+YD +SGRSRG+
Sbjct: 188 NSSYQGGRGGGSMDSSNRVYVGNLAWSVDQQQLETLFSEQGKVVDAKVVYDRDSGRSRGF 247
Query: 111 GFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
GFV YS+ E+ A+ESL+GV+L GRA+RVS A+ R
Sbjct: 248 GFVTYSSAKEVNDAIESLDGVDLGGRAIRVSPAEAR 283
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 54/79 (68%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A D K+FVGNL +SV + +L + F+ G+V V+YD +GRSRG+GFV S+K +E
Sbjct: 95 ANPDLKIFVGNLPFSVDSAALAELFERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVE 154
Query: 123 TALESLNGVELEGRAMRVS 141
A + NG E++GRA+RV+
Sbjct: 155 AACQQFNGYEIDGRALRVN 173
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDR++GRSRGF FVT S+ ++ N IE+LDG + GR +RV+ ++ P+
Sbjct: 235 VVYDRDSGRSRGFGFVTYSSAKEVNDAIESLDGVDLGGRAIRVSPAEARPPR 286
>gi|42407939|dbj|BAD09078.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|125604308|gb|EAZ43633.1| hypothetical protein OsJ_28256 [Oryza sativa Japonica Group]
gi|215697914|dbj|BAG92121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 305
Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 96/144 (66%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK----PKLPLY 62
V+Y+RETG+SRGF FVTMST+E+ + IE L+ + GR+L VN + P+ + P
Sbjct: 158 VIYNRETGQSRGFGFVTMSTIEEADKAIEMLNRYDINGRLLNVNRA-APRGSRVERPPRQ 216
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
F+ +VGNL W V L Q F E+G VV A V+YD ESGRSRG+GFV ++K E++
Sbjct: 217 FAPAFRAYVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELD 276
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G EL+GR +RV++A R
Sbjct: 277 DAISALDGQELDGRPLRVNVAAER 300
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + V +E L Q F++ G V A V+Y+ E+G+SRG+GFV ST E + A+E
Sbjct: 128 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 187
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
LN ++ GR + V+ A R S
Sbjct: 188 LNRYDINGRLLNVNRAAPRGS 208
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF-SDKPK 56
+V+YDRE+GRSRGF FV+M++ E+ + I LDG+E GR LRVN +++P+
Sbjct: 251 SVVYDRESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLRVNVAAERPQ 302
>gi|125562527|gb|EAZ07975.1| hypothetical protein OsI_30233 [Oryza sativa Indica Group]
Length = 306
Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 96/144 (66%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK----PKLPLY 62
V+Y+RETG+SRGF FVTMST+E+ + IE L+ + GR+L VN + P+ + P
Sbjct: 159 VIYNRETGQSRGFGFVTMSTIEEADKAIEMLNRYDINGRLLNVNRA-APRGSRVERPPRQ 217
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
F+ +VGNL W V L Q F E+G VV A V+YD ESGRSRG+GFV ++K E++
Sbjct: 218 FAPAFRAYVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELD 277
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G EL+GR +RV++A R
Sbjct: 278 DAISALDGQELDGRPLRVNVAAER 301
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + V +E L Q F++ G V A V+Y+ E+G+SRG+GFV ST E + A+E
Sbjct: 129 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 188
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
LN ++ GR + V+ A R S
Sbjct: 189 LNRYDINGRLLNVNRAAPRGS 209
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF-SDKPK 56
+V+YDRE+GRSRGF FV+M++ E+ + I LDG+E GR LRVN +++P+
Sbjct: 252 SVVYDRESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLRVNVAAERPQ 303
>gi|115480705|ref|NP_001063946.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|52076131|dbj|BAD46644.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|52076138|dbj|BAD46651.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|113632179|dbj|BAF25860.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|215697272|dbj|BAG91266.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737486|dbj|BAG96616.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218202645|gb|EEC85072.1| hypothetical protein OsI_32419 [Oryza sativa Indica Group]
gi|222642113|gb|EEE70245.1| hypothetical protein OsJ_30367 [Oryza sativa Japonica Group]
Length = 322
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 94/146 (64%), Gaps = 9/146 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK------LP 60
V+Y+RET RSRGF FVTMSTVE+ +E + GR+L VN K P+ P
Sbjct: 174 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDVDGRLLTVN---KAAPRGARVERPP 230
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
F+++VGNL W V L Q F E+G VV ARV+YD E+GRSRG+GFV +T+ E
Sbjct: 231 RQFGPSFRIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMATQEE 290
Query: 121 METALESLNGVELEGRAMRVSLAQGR 146
++ A+ +L+G L+GRA+RV++A+ R
Sbjct: 291 LDDAIAALDGQSLDGRALRVNVAEER 316
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + + +E L Q F++ G V + V+Y+ E+ RSRG+GFV ST E E A+E
Sbjct: 144 KVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 203
Query: 128 LNGVELEGRAMRVSLAQGR 146
+ +++GR + V+ A R
Sbjct: 204 FHRYDVDGRLLTVNKAAPR 222
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDRETGRSRGF FVTM+T E+ + I LDG+ GR LRVN +++ P+
Sbjct: 268 VVYDRETGRSRGFGFVTMATQEELDDAIAALDGQSLDGRALRVNVAEERPPR 319
>gi|356572637|ref|XP_003554474.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 317
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 98/157 (62%), Gaps = 12/157 (7%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + ++YDR T RSRGFAFVTM +VED I DG + GR ++VNF + PK L
Sbjct: 134 VASVEIVYDRVTDRSRGFAFVTMGSVEDAKEAIRMFDGSQVGGRTVKVNFPEVPKGGERL 193
Query: 62 ------------YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
+ ++ K++ GNL W +T++ L +AF E V+ A+V+Y+ +SGRSRG
Sbjct: 194 VMGSKILNSYRGFVDSPHKIYAGNLGWGLTSQGLREAFAEQPGVLSAKVIYERDSGRSRG 253
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+GFV + T AL+ +NGVE++GR +R++LA+ R
Sbjct: 254 FGFVSFETAESARAALDIMNGVEVQGRPLRLNLAEAR 290
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+VGNL +S+T L + F E G V ++YD + RSRG+ FV + + + A+
Sbjct: 109 RLYVGNLPYSITNSELGELFGEAGTVASVEIVYDRVTDRSRGFAFVTMGSVEDAKEAIRM 168
Query: 128 LNGVELEGRAMRVSLAQ 144
+G ++ GR ++V+ +
Sbjct: 169 FDGSQVGGRTVKVNFPE 185
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
V+Y+R++GRSRGF FV+ T E A ++ ++G E GR LR+N ++ P P
Sbjct: 242 VIYERDSGRSRGFGFVSFETAESARAALDIMNGVEVQGRPLRLNLAEARTPSSP 295
>gi|388512737|gb|AFK44430.1| unknown [Medicago truncatula]
Length = 291
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 93/149 (62%), Gaps = 12/149 (8%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK-------- 58
V+Y+R+T SRGF FVTM+TVE+ + +E +G +Y GR L VN K PK
Sbjct: 140 VIYNRQTDLSRGFGFVTMNTVEEAESAVEKFNGYDYNGRSLVVN---KASPKGSRPERTE 196
Query: 59 -LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
P E +++V NL+W V L Q F E+G +V ARV+YD E+GRSRG+GFV S
Sbjct: 197 RAPRTFEPVLRIYVANLAWEVDNSRLEQVFSEHGKIVSARVVYDRETGRSRGFGFVTMSD 256
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQGR 146
+ EM A+ +L+G LEGR +RVS+A+ R
Sbjct: 257 ETEMNDAIAALDGQSLEGRTIRVSVAEDR 285
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D KLFVGN + V +E L F + G V A V+Y+ ++ SRG+GFV +T E E+A+
Sbjct: 108 DAKLFVGNFPFDVDSEKLAMLFGQAGTVEIAEVIYNRQTDLSRGFGFVTMNTVEEAESAV 167
Query: 126 ESLNGVELEGRAMRVSLAQGRRS 148
E NG + GR++ V+ A + S
Sbjct: 168 EKFNGYDYNGRSLVVNKASPKGS 190
>gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
gi|297313481|gb|EFH43904.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
Length = 305
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 96/144 (66%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+Y+RET +SRGF FVTMSTVE+ +E + + GR+L VN + +P+ + P
Sbjct: 158 VIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPE-RAPRV 216
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
E F+++VGNL W V L Q F E+G VV ARV+YD E+GRSRG+GFV S + E+
Sbjct: 217 YEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNENELN 276
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G +EGRA+RV++A+ R
Sbjct: 277 DAIAALDGQNMEGRAIRVNVAEER 300
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNL++ V +++L F++ G V A V+Y+ E+ +SRG+GFV ST E ETA+E
Sbjct: 128 KLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEK 187
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
N +L GR + V+ A R S
Sbjct: 188 FNRYDLNGRLLTVNKAAPRGS 208
>gi|296089370|emb|CBI39142.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 102/154 (66%), Gaps = 12/154 (7%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-------- 56
+ ++YDR T RSRGFAFVTM +V++ I DG + GR ++VNF + P+
Sbjct: 19 VEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMG 78
Query: 57 PKLPL----YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
PK+ + ++ +K++ GNLSW +T+E L AF ++ ++GA+V+Y+ ESGRSRG+GF
Sbjct: 79 PKIRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADHPGLLGAKVIYERESGRSRGFGF 138
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ +++ E+AL ++N VE+EGR +R++LA R
Sbjct: 139 LSFASAENAESALNAMNEVEVEGRPLRLNLAAVR 172
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%)
Query: 78 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 137
+T+ L F E G+V+ ++YD + RSRG+ FV + E + A+ +G ++ GR
Sbjct: 1 MTSSQLGDVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRT 60
Query: 138 MRVSLAQ 144
++V+ +
Sbjct: 61 VKVNFPE 67
>gi|297608990|ref|NP_001062481.2| Os08g0557100 [Oryza sativa Japonica Group]
gi|255678651|dbj|BAF24395.2| Os08g0557100, partial [Oryza sativa Japonica Group]
Length = 194
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 96/144 (66%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK----PKLPLY 62
V+Y+RETG+SRGF FVTMST+E+ + IE L+ + GR+L VN + P+ + P
Sbjct: 47 VIYNRETGQSRGFGFVTMSTIEEADKAIEMLNRYDINGRLLNVNRA-APRGSRVERPPRQ 105
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
F+ +VGNL W V L Q F E+G VV A V+YD ESGRSRG+GFV ++K E++
Sbjct: 106 FAPAFRAYVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELD 165
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G EL+GR +RV++A R
Sbjct: 166 DAISALDGQELDGRPLRVNVAAER 189
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + V +E L Q F++ G V A V+Y+ E+G+SRG+GFV ST E + A+E
Sbjct: 17 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 76
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
LN ++ GR + V+ A R S
Sbjct: 77 LNRYDINGRLLNVNRAAPRGS 97
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF-SDKPK 56
+V+YDRE+GRSRGF FV+M++ E+ + I LDG+E GR LRVN +++P+
Sbjct: 140 SVVYDRESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLRVNVAAERPQ 191
>gi|168274276|dbj|BAG09558.1| chloroplast RNA binding protein [Mesembryanthemum crystallinum]
Length = 306
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 98/144 (68%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+Y+RET RSRGF FVTMSTVE+ +E L+G + GR+L VN + +P+ + P
Sbjct: 159 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMLNGFDMNGRLLTVNKAAPRGSRPE-RPPRE 217
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
E +++VGNL W V L Q F E+G V+ ARV+ D E+GRSRG+GFV ++++EM
Sbjct: 218 FEPSCRVYVGNLPWDVDNARLEQVFSEHGKVLSARVVSDRETGRSRGFGFVSMASESEMN 277
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G L+GRA+RV++A+ R
Sbjct: 278 DAIAALDGQTLDGRAIRVNVAEER 301
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 51/81 (62%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNL + V +E L Q F G V A V+Y+ E+ RSRG+GFV ST E E A+E
Sbjct: 129 KLFVGNLPYDVDSERLAQIFDGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 188
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
LNG ++ GR + V+ A R S
Sbjct: 189 LNGFDMNGRLLTVNKAAPRGS 209
>gi|149391365|gb|ABR25700.1| chloroplast 28 kDa ribonucleoprotein [Oryza sativa Indica Group]
Length = 186
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 94/146 (64%), Gaps = 9/146 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK------LP 60
V+Y+RET RSRGF FVTMSTVE+ +E + GR+L VN K P+ P
Sbjct: 38 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDVDGRLLTVN---KAAPRGARVERPP 94
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
F+++VGNL W V L Q F E+G VV ARV+YD E+GRSRG+GFV +T+ E
Sbjct: 95 RQFGPSFRIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMATQEE 154
Query: 121 METALESLNGVELEGRAMRVSLAQGR 146
++ A+ +L+G L+GRA+RV++A+ R
Sbjct: 155 LDDAIAALDGQSLDGRALRVNVAEER 180
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + + +E L Q F++ G V + V+Y+ E+ RSRG+GFV ST E E A+E
Sbjct: 8 KVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 67
Query: 128 LNGVELEGRAMRVSLAQGR 146
+ +++GR + V+ A R
Sbjct: 68 FHRYDVDGRLLTVNKAAPR 86
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDRETGRSRGF FVTM+T E+ + I LDG+ GR LRVN +++ P+
Sbjct: 132 VVYDRETGRSRGFGFVTMATQEELDDAIAALDGQSLDGRALRVNVAEERPPR 183
>gi|242079661|ref|XP_002444599.1| hypothetical protein SORBIDRAFT_07g024400 [Sorghum bicolor]
gi|241940949|gb|EES14094.1| hypothetical protein SORBIDRAFT_07g024400 [Sorghum bicolor]
Length = 292
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 93/143 (65%), Gaps = 3/143 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL---PLYA 63
V+Y+RETG+SRGF FVTMST+E+ + IE + + GR+L VN + ++ P
Sbjct: 145 VIYNRETGQSRGFGFVTMSTIEEADKAIEMFNRYDISGRLLNVNRASPRGTRMERPPRQF 204
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
F+ +VGNL W V L Q F E+G VV A V+YD ESGRSRG+GFV +K E++
Sbjct: 205 APAFRAYVGNLPWQVDDSRLVQLFSEHGEVVNATVVYDRESGRSRGFGFVTMVSKEELDD 264
Query: 124 ALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G EL+GR +RV++A R
Sbjct: 265 AISALDGQELDGRPLRVNVAAER 287
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + + +E L Q F + G V A V+Y+ E+G+SRG+GFV ST E + A+E
Sbjct: 115 KVYVGNLPYDIDSEGLAQLFDQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 174
Query: 128 LNGVELEGRAMRVSLAQGR 146
N ++ GR + V+ A R
Sbjct: 175 FNRYDISGRLLNVNRASPR 193
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF-SDKPK 56
TV+YDRE+GRSRGF FVTM + E+ + I LDG+E GR LRVN +++P+
Sbjct: 238 TVVYDRESGRSRGFGFVTMVSKEELDDAISALDGQELDGRPLRVNVAAERPQ 289
>gi|19032262|emb|CAD18922.1| RNA-binding protein precursor [Persea americana]
Length = 315
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 95/146 (65%), Gaps = 9/146 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK------LP 60
V+Y+RET +SRGF FV+MSTVE+ IE D + GR L VN K P+ P
Sbjct: 167 VIYNRETDQSRGFGFVSMSTVEEVVKAIEMFDRYDINGRTLTVN---KAAPRGSRAERPP 223
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
E F+++VGN+ W V L Q F EYG V AR+++D E+GRSRG+GFV S++ E
Sbjct: 224 RDFEPAFRVYVGNIPWQVDNLRLEQLFSEYGKVEEARIVFDRETGRSRGFGFVTMSSQIE 283
Query: 121 METALESLNGVELEGRAMRVSLAQGR 146
ME A+ +L+G +L+GRA++VS+AQ R
Sbjct: 284 MEDAIAALDGSDLDGRAIKVSMAQER 309
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K+FVGNL + + + L F + G V A V+Y+ E+ +SRG+GFV ST E+ A+E
Sbjct: 137 KIFVGNLPFDLESADLADLFNKAGVVESAEVIYNRETDQSRGFGFVSMSTVEEVVKAIEM 196
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
+ ++ GR + V+ A R S
Sbjct: 197 FDRYDINGRTLTVNKAAPRGS 217
>gi|297733663|emb|CBI14910.3| unnamed protein product [Vitis vinifera]
Length = 306
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 96/144 (66%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+Y+RET RSRGF FV+MSTVE+ ++ E GR+L VN + +P+ + P
Sbjct: 158 VIYNRETDRSRGFGFVSMSTVEEAEKAVDMFHRYELDGRLLTVNKAAPRGSQPE-RPPRV 216
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
E F+++VGNL W V + L Q F E+G VV ARV++D E+GRSRG+GFV S++ E+E
Sbjct: 217 FEPAFRMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELE 276
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ + +G L+GR +RV++A+ R
Sbjct: 277 DAIAATDGQTLDGRTIRVNVAEER 300
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K+FVGNL + V +E L + F++ G V A V+Y+ E+ RSRG+GFV ST E E A++
Sbjct: 128 KVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAVDM 187
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
+ EL+GR + V+ A R S
Sbjct: 188 FHRYELDGRLLTVNKAAPRGS 208
>gi|225456840|ref|XP_002278832.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
Length = 327
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 96/144 (66%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+Y+RET RSRGF FV+MSTVE+ ++ E GR+L VN + +P+ + P
Sbjct: 179 VIYNRETDRSRGFGFVSMSTVEEAEKAVDMFHRYELDGRLLTVNKAAPRGSQPE-RPPRV 237
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
E F+++VGNL W V + L Q F E+G VV ARV++D E+GRSRG+GFV S++ E+E
Sbjct: 238 FEPAFRMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELE 297
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ + +G L+GR +RV++A+ R
Sbjct: 298 DAIAATDGQTLDGRTIRVNVAEER 321
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K+FVGNL + V +E L + F++ G V A V+Y+ E+ RSRG+GFV ST E E A++
Sbjct: 149 KVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAVDM 208
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
+ EL+GR + V+ A R S
Sbjct: 209 FHRYELDGRLLTVNKAAPRGS 229
>gi|238010804|gb|ACR36437.1| unknown [Zea mays]
Length = 262
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 96/148 (64%), Gaps = 7/148 (4%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK-----L 59
+ V+YD+ TGRSRGF FVTMS+VE+ ++ +G GR LRVN S P P+
Sbjct: 110 VEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQFNGYVLDGRSLRVN-SGPPPPRDRSSRS 168
Query: 60 PLYAETDF-KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
P D +++VGNLSW V +L F E G V+ AR++YD ESGRSRG+GFV Y +
Sbjct: 169 PQRPRGDANRVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSA 228
Query: 119 AEMETALESLNGVELEGRAMRVSLAQGR 146
E+E A+ +L+G +L+GR +RV++A+ +
Sbjct: 229 EEVENAISNLDGADLDGRQIRVTVAESK 256
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D ++FVGNL +SV + L F++ G+V V+YD +GRSRG+GFV S+ E+E A+
Sbjct: 80 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAV 139
Query: 126 ESLNGVELEGRAMRVS 141
+ NG L+GR++RV+
Sbjct: 140 DQFNGYVLDGRSLRVN 155
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
++YDRE+GRSRGF FVT + E+ I NLDG + GR +RV ++ P+
Sbjct: 208 IIYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLDGRQIRVTVAESKPPR 259
>gi|449440111|ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449483348|ref|XP_004156563.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 278
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 100/159 (62%), Gaps = 17/159 (10%)
Query: 1 MLSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
+ ++ V+YD+ TGRSRGF FVTMSTV + A + +G E GR+LRVN+ P P
Sbjct: 118 QVERVEVIYDKTTGRSRGFGFVTMSTVGEVEAAAQQFNGYELDGRLLRVNYGPPP----P 173
Query: 61 LYAETDFK-------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS 107
++ F+ + V NL+W V +L F+E GNV+ A+V+YD +SG+S
Sbjct: 174 KRDDSSFRGSRNASRFDNRNRVHVSNLAWGVDDLTLENLFREKGNVLEAKVVYDRDSGKS 233
Query: 108 RGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
RG+GFV Y++ E+ A++SL+GV+L+GR +RV+ A+ R
Sbjct: 234 RGFGFVTYNSAEEVNEAIQSLDGVDLDGRPIRVTQAEAR 272
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D KLFVGNL ++V + L F+ G V V+YD +GRSRG+GFV ST E+E A
Sbjct: 92 DLKLFVGNLPFTVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSTVGEVEAAA 151
Query: 126 ESLNGVELEGRAMRVS 141
+ NG EL+GR +RV+
Sbjct: 152 QQFNGYELDGRLLRVN 167
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDR++G+SRGF FVT ++ E+ N I++LDG + GR +RV ++ P+
Sbjct: 224 VVYDRDSGKSRGFGFVTYNSAEEVNEAIQSLDGVDLDGRPIRVTQAEARPPR 275
>gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223550401|gb|EEF51888.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 319
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 95/144 (65%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+Y+RET SRGF FV+MSTVE+ +E + GR+L VN + +P+ + P
Sbjct: 172 VIYNRETDTSRGFGFVSMSTVEEAEKAVEMFHRHDLDGRLLTVNKAAPRGSRPE-RPPRV 230
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
E ++++VGNL W V L Q F E+G VV ARV+YD ++GRSRG+GFV ST+ E+
Sbjct: 231 FEPGYRIYVGNLPWDVDNARLEQIFSEHGKVVDARVVYDRDTGRSRGFGFVTMSTETELN 290
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G L+GRA+RV++A+ R
Sbjct: 291 DAIAALDGRSLDGRAIRVNVAEQR 314
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D K+FVGNL + V ++ L F++ G V A V+Y+ E+ SRG+GFV ST E E A+
Sbjct: 140 DAKIFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVSMSTVEEAEKAV 199
Query: 126 ESLNGVELEGRAMRVSLAQGRRS 148
E + +L+GR + V+ A R S
Sbjct: 200 EMFHRHDLDGRLLTVNKAAPRGS 222
>gi|1350820|sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP30; Flags: Precursor
gi|19708|emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia]
Length = 279
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 97/158 (61%), Gaps = 16/158 (10%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK------ 58
+ V+YD+ TGRSRGF FVTMS+ E+ A + +G E GR LRVN P+ +
Sbjct: 116 VEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFR 175
Query: 59 ----------LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSR 108
++ +++VGNL+W V ++L F E G VV A+V+YD +SGRSR
Sbjct: 176 ENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSR 235
Query: 109 GYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
G+GFV YS+ E+ A+ESL+GV+L GRA+RVS A+ R
Sbjct: 236 GFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEAR 273
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 53/76 (69%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D K+FVGNL +S + +L + F+ GNV V+YD +GRSRG+GFV S+K E+E A
Sbjct: 86 DLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAAC 145
Query: 126 ESLNGVELEGRAMRVS 141
+ NG EL+GRA+RV+
Sbjct: 146 QQFNGYELDGRALRVN 161
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDR++GRSRGF FVT S+ E+ N IE+LDG + GR +RV+ ++ P+
Sbjct: 225 VVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPR 276
>gi|356537206|ref|XP_003537120.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 298
Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 94/150 (62%), Gaps = 8/150 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL----- 61
++YD RSRGFAFVTM ++ED I DG E GRI++VNF+ PK L
Sbjct: 119 IVYDDIMDRSRGFAFVTMGSMEDAERAIRMFDGSEIGGRIMKVNFTAIPKRGKRLVMGSN 178
Query: 62 ---YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
+ ++ K++ GNL W +T++ L AF E + A+V+Y+ SGRSRGYGFV + T
Sbjct: 179 YRGFVDSPHKIYAGNLGWGLTSQDLRDAFAEQPGFLSAKVIYERNSGRSRGYGFVSFETA 238
Query: 119 AEMETALESLNGVELEGRAMRVSLAQGRRS 148
++E AL S+NGVE++GR +R++LA + +
Sbjct: 239 EDVEAALNSMNGVEVQGRPLRLNLATDKNT 268
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 54 KPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
KP+P + +LFVGNL +S+ + L Q F E GNVV ++YD RSRG+ FV
Sbjct: 76 KPEPNAS-HTNQSSRLFVGNLPYSLLSSQLAQRFGEAGNVVSVEIVYDDIMDRSRGFAFV 134
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSL 142
+ + E A+ +G E+ GR M+V+
Sbjct: 135 TMGSMEDAERAIRMFDGSEIGGRIMKVNF 163
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
V+Y+R +GRSRG+ FV+ T ED A + +++G E GR LR+N + PL
Sbjct: 218 VIYERNSGRSRGYGFVSFETAEDVEAALNSMNGVEVQGRPLRLNLATDKNTSSPL 272
>gi|358248672|ref|NP_001239665.1| uncharacterized protein LOC100790280 [Glycine max]
gi|255644452|gb|ACU22730.1| unknown [Glycine max]
Length = 290
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 93/145 (64%), Gaps = 5/145 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA--- 63
V+Y+RET +SRGF FVTMSTVE+ + +E + + GR+L VN + +
Sbjct: 140 VIYNRETDQSRGFGFVTMSTVEEAESAVEKFNRYDIDGRLLTVNKASPRGTRPERPPPRR 199
Query: 64 --ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
E+ ++VGNL W V L Q F ++GNVV ARV+YD ESGRSRG+GFV S + EM
Sbjct: 200 SFESSLSIYVGNLPWDVDNTRLKQIFSKHGNVVNARVVYDRESGRSRGFGFVTMSDETEM 259
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G L+GRA++VS+A+ R
Sbjct: 260 NDAVAALDGESLDGRAIKVSVAEDR 284
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNL + V ++ L F++ G V A V+Y+ E+ +SRG+GFV ST E E+A+E
Sbjct: 110 KLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAESAVEK 169
Query: 128 LNGVELEGRAMRVSLA 143
N +++GR + V+ A
Sbjct: 170 FNRYDIDGRLLTVNKA 185
>gi|296087572|emb|CBI34828.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 95/143 (66%), Gaps = 3/143 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYA- 63
V+Y+RET +SRGF F+TMSTVE+ +E + + GR L VN + +P+ P A
Sbjct: 124 VIYNRETDQSRGFGFITMSTVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAF 183
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
E F+++VGNL W V L Q F E+G VV ARV+YD ++ RSRG+GFV S++ E+
Sbjct: 184 EPSFRIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELND 243
Query: 124 ALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G L+GRA+RV++A+ R
Sbjct: 244 AIAALDGQSLDGRAIRVNVAEER 266
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNL + + +E L Q F E G V A V+Y+ E+ +SRG+GF+ ST E E A+E
Sbjct: 94 KLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVEM 153
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
N +L GR + V+ A R S
Sbjct: 154 FNRYDLNGRFLTVNKAAPRGS 174
>gi|226509575|ref|NP_001149184.1| LOC100282806 [Zea mays]
gi|195625314|gb|ACG34487.1| ribonucleoprotein [Zea mays]
Length = 286
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 95/147 (64%), Gaps = 11/147 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPKPKL 59
V+Y+RETG+SRGF FVTMSTVE+ + IE + + GR+L VN + ++P+ +
Sbjct: 139 VIYNRETGQSRGFGFVTMSTVEEADKAIEMFNRYDISGRLLNVNRASSRGTRMERPQRQF 198
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
F+ +VGNL W V L Q F E+G VV A+V+YD E+GRSRG+GFV +K
Sbjct: 199 ----APAFRAYVGNLPWQVDDSRLVQLFSEHGEVVDAKVVYDRETGRSRGFGFVSMVSKE 254
Query: 120 EMETALESLNGVELEGRAMRVSLAQGR 146
E+ A+ +L+G EL+GR +RV++A R
Sbjct: 255 ELNDAISALDGQELDGRPLRVNVAAER 281
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + V +E L Q F + G V A V+Y+ E+G+SRG+GFV ST E + A+E
Sbjct: 109 KVYVGNLPYDVDSEGLAQIFDQAGVVEVAEVIYNRETGQSRGFGFVTMSTVEEADKAIEM 168
Query: 128 LNGVELEGRAMRVSLAQGR 146
N ++ GR + V+ A R
Sbjct: 169 FNRYDISGRLLNVNRASSR 187
>gi|225440003|ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
vinifera]
Length = 288
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 96/165 (58%), Gaps = 23/165 (13%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-------- 56
+ V+YD+ TGRSRGF FVTMSTVE+ A + +G E GR LRVN P
Sbjct: 119 VEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNFR 178
Query: 57 ---------------PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD 101
P+ + +++VGNLSW V +L F E G V ARV+YD
Sbjct: 179 GENSNFRGENTNFRGPRGGANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYD 238
Query: 102 GESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
E+GRSRG+GFV Y++ E+ A+ESL+GV+L GR++RV++A+ R
Sbjct: 239 RETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEAR 283
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 51 FSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 110
SD+ +P D KLFVGNL ++V + L F++ GNV V+YD +GRSRG+
Sbjct: 78 LSDEGEPSF----SPDLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRGF 133
Query: 111 GFVCYSTKAEMETALESLNGVELEGRAMRVS 141
GFV ST E+E A + NG ELEGR +RV+
Sbjct: 134 GFVTMSTVEEVEAAAQQFNGYELEGRQLRVN 164
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPK 56
+++ V+YDRETGRSRGF FVT ++ E+ N IE+LDG + GR +RV ++ +P+
Sbjct: 230 VTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEARPR 285
>gi|133246|sp|P19682.1|ROC3_NICSY RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP;
Flags: Precursor
gi|100388|pir||S12109 ribonucleoprotein, 28K, precursor - common tobacco
gi|19750|emb|CAA37880.1| unnamed protein product [Nicotiana sylvestris]
Length = 276
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 96/144 (66%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+Y+RET RSRGF FVTMSTVE+ + +E + GR+L VN + +P+ + P
Sbjct: 128 VIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVNKAAPRGSRPE-RAPRT 186
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
+ ++++VGN+ W + L Q F E+G VV ARV++D ESGRSRG+GFV S++AEM
Sbjct: 187 FQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMS 246
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G L+GR +RV+ A+ R
Sbjct: 247 EAIANLDGQTLDGRTIRVNAAEER 270
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 52/83 (62%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D KLFVGNL + + +E L Q FQ+ G V A V+Y+ E+ RSRG+GFV ST E + A+
Sbjct: 96 DAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAV 155
Query: 126 ESLNGVELEGRAMRVSLAQGRRS 148
E + +L GR + V+ A R S
Sbjct: 156 ELYSQYDLNGRLLTVNKAAPRGS 178
>gi|2443390|dbj|BAA22411.1| Ps16 protein [Triticum aestivum]
Length = 293
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 96/146 (65%), Gaps = 9/146 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK------LP 60
V+Y+RET +SRGF FVTMST+E+ +E + GR+L VN K P+ P
Sbjct: 146 VIYNRETDQSRGFGFVTMSTIEEAEKAVEMFHRYDVNGRLLTVN---KAAPRGARVERPP 202
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ + F+++VGNL W V L + F E+G VV ARV+YD ++GRSRG+GFV +++ E
Sbjct: 203 RDSGSSFRIYVGNLPWQVDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQPE 262
Query: 121 METALESLNGVELEGRAMRVSLAQGR 146
++ A+ +L+G LEGRA+RV++A+ R
Sbjct: 263 LDDAIAALDGQSLEGRALRVNVAEER 288
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + V +E L Q F++ G V + V+Y+ E+ +SRG+GFV ST E E A+E
Sbjct: 116 KVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKAVEM 175
Query: 128 LNGVELEGRAMRVSLAQGR 146
+ ++ GR + V+ A R
Sbjct: 176 FHRYDVNGRLLTVNKAAPR 194
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDR+TGRSRGF FVTM++ + + I LDG+ GR LRVN +++ P+
Sbjct: 240 VVYDRDTGRSRGFGFVTMASQPELDDAIAALDGQSLEGRALRVNVAEERPPR 291
>gi|225452270|ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
vinifera]
Length = 312
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 95/143 (66%), Gaps = 3/143 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYA- 63
V+Y+RET +SRGF F+TMSTVE+ +E + + GR L VN + +P+ P A
Sbjct: 164 VIYNRETDQSRGFGFITMSTVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAF 223
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
E F+++VGNL W V L Q F E+G VV ARV+YD ++ RSRG+GFV S++ E+
Sbjct: 224 EPSFRIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELND 283
Query: 124 ALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G L+GRA+RV++A+ R
Sbjct: 284 AIAALDGQSLDGRAIRVNVAEER 306
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNL + + +E L Q F E G V A V+Y+ E+ +SRG+GF+ ST E E A+E
Sbjct: 134 KLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVEM 193
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
N +L GR + V+ A R S
Sbjct: 194 FNRYDLNGRFLTVNKAAPRGS 214
>gi|449440612|ref|XP_004138078.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 330
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 94/148 (63%), Gaps = 13/148 (8%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD--------KPKPK 58
V+Y+RET RSRGF FVTMSTVE+ ++ + + GR+L VN + +P+P
Sbjct: 183 VIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYDLSGRLLTVNKAAPRGSRQEREPRPF 242
Query: 59 LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
P F+++VGNL W V L Q F E+G VV ARVLYD +SGRSRG+GFV + +
Sbjct: 243 QPT-----FRIYVGNLPWDVDNGRLEQLFSEHGKVVDARVLYDRDSGRSRGFGFVTMADE 297
Query: 119 AEMETALESLNGVELEGRAMRVSLAQGR 146
M A+ +L+G L+GRA+RV++A+ R
Sbjct: 298 TGMNDAIAALDGQSLDGRAIRVNVAEER 325
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D KLFVGNL + + +E L F++ G V A V+Y+ E+ RSRG+GFV ST E E A+
Sbjct: 151 DAKLFVGNLPYDIDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 210
Query: 126 ESLNGVELEGRAMRVSLAQGRRS 148
++ N +L GR + V+ A R S
Sbjct: 211 DTFNRYDLSGRLLTVNKAAPRGS 233
>gi|147769830|emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]
Length = 454
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 100/152 (65%), Gaps = 12/152 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK--------PK 58
++YDR T RSRGFAFVTM +V++ I DG + GR ++VNF + P+ PK
Sbjct: 277 IVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPK 336
Query: 59 LPL----YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
+ + ++ +K++ GNLSW +T+E L AF + ++GA+V+Y+ ESGRSRG+GF+
Sbjct: 337 IRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADXPGLLGAKVIYERESGRSRGFGFLS 396
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+++ E+AL ++B VE+EGR +R++LA R
Sbjct: 397 FASAENAESALNAMBEVEVEGRPLRLNLAAVR 428
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
PK+ AE +L+VGNL +S+T+ L F E G+V+ ++YD + RSRG+ FV
Sbjct: 237 PKVSDSAEAS-RLYVGNLPYSMTSSQLGXVFNEAGSVISVEIVYDRVTDRSRGFAFVTMG 295
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGRR 147
+ E + A+ +G ++ GR ++V+ + R
Sbjct: 296 SVQEAKEAIRMFDGSQVGGRTVKVNFPEVPR 326
>gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thaliana]
Length = 310
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 95/144 (65%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+Y+RET +SRGF FVTMS+V++ +E + + GR+L VN + +P+ + P
Sbjct: 162 VIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPE-RAPRV 220
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
E F+++VGNL W V L Q F E+G VV ARV+YD E+GRSRG+GFV S E+
Sbjct: 221 YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELN 280
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G LEGRA+RV++A+ R
Sbjct: 281 EAISALDGQNLEGRAIRVNVAEER 304
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNL++ V +++L F++ G V A V+Y+ E+ +SRG+GFV S+ E ETA+E
Sbjct: 132 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 191
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
N +L GR + V+ A R S
Sbjct: 192 FNRYDLNGRLLTVNKAAPRGS 212
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDRETGRSRGF FVTMS V++ N I LDG+ GR +RVN +++ P+
Sbjct: 256 VVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 307
>gi|449501439|ref|XP_004161367.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like, partial
[Cucumis sativus]
Length = 324
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 94/148 (63%), Gaps = 13/148 (8%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD--------KPKPK 58
V+Y+RET RSRGF FVTMSTVE+ ++ + + GR+L VN + +P+P
Sbjct: 177 VIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYDLSGRLLTVNKAAPRGSRQEREPRPF 236
Query: 59 LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
P F+++VGNL W V L Q F E+G VV ARVLYD +SGRSRG+GFV + +
Sbjct: 237 QPT-----FRIYVGNLPWDVDNGRLEQLFSEHGKVVDARVLYDRDSGRSRGFGFVTMADE 291
Query: 119 AEMETALESLNGVELEGRAMRVSLAQGR 146
M A+ +L+G L+GRA+RV++A+ R
Sbjct: 292 TGMNDAIAALDGQSLDGRAIRVNVAEER 319
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D KLFVGNL + + +E L F++ G V A V+Y+ E+ RSRG+GFV ST E E A+
Sbjct: 145 DAKLFVGNLPYDIDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 204
Query: 126 ESLNGVELEGRAMRVSLAQGRRS 148
++ N +L GR + V+ A R S
Sbjct: 205 DTFNRYDLSGRLLTVNKAAPRGS 227
>gi|326527719|dbj|BAK08134.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 96/143 (67%), Gaps = 3/143 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL---PLYA 63
V+Y+RE+G+SRGF FVTMST+E+ + IE + + GR+L VN + + ++ P
Sbjct: 136 VIYNRESGQSRGFGFVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQF 195
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ F+ +VGNL W L Q F E+G VV A ++YD E+GRSRG+GFV ++K ++++
Sbjct: 196 ASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDS 255
Query: 124 ALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G E++GR +RV++A R
Sbjct: 256 AISALDGQEMDGRPLRVNVAAER 278
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + V +E L Q F + G V A V+Y+ ESG+SRG+GFV ST E + A+E+
Sbjct: 106 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 165
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
N ++ GR + V+ A R S
Sbjct: 166 FNRYDISGRLLNVNRAAQRGS 186
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF-SDKPK 56
T++YDRETGRSRGF FVTM++ ED ++ I LDG+E GR LRVN +++P+
Sbjct: 229 TIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQ 280
>gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 314
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 95/144 (65%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+Y+RET +SRGF FVTMS+V++ +E + + GR+L VN + +P+ + P
Sbjct: 166 VIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPE-RAPRV 224
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
E F+++VGNL W V L Q F E+G VV ARV+YD E+GRSRG+GFV S E+
Sbjct: 225 YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELN 284
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G LEGRA+RV++A+ R
Sbjct: 285 EAISALDGQNLEGRAIRVNVAEER 308
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNL++ V +++L F++ G V A V+Y+ E+ +SRG+GFV S+ E ETA+E
Sbjct: 136 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 195
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
N +L GR + V+ A R S
Sbjct: 196 FNRYDLNGRLLTVNKAAPRGS 216
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDRETGRSRGF FVTMS V++ N I LDG+ GR +RVN +++ P+
Sbjct: 260 VVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 311
>gi|326516784|dbj|BAJ96384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 96/143 (67%), Gaps = 3/143 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL---PLYA 63
V+Y+RE+G+SRGF FVTMST+E+ + IE + + GR+L VN + + ++ P
Sbjct: 136 VIYNRESGQSRGFGFVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRRF 195
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ F+ +VGNL W L Q F E+G VV A ++YD E+GRSRG+GFV ++K ++++
Sbjct: 196 ASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDS 255
Query: 124 ALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G E++GR +RV++A R
Sbjct: 256 AISALDGQEMDGRPLRVNVAAER 278
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + V +E L Q F + G V A V+Y+ ESG+SRG+GFV ST E + A+E+
Sbjct: 106 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 165
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
N ++ GR + V+ A R S
Sbjct: 166 FNRYDISGRLLNVNRAAQRGS 186
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF-SDKPK 56
T++YDRETGRSRGF FVTM++ ED ++ I LDG+E GR LRVN +++P+
Sbjct: 229 TIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQ 280
>gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thaliana]
gi|464662|sp|Q04836.1|ROC3_ARATH RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein 1/2/3; Short=AtRBP33; AltName:
Full=RNA-binding protein RNP-T; AltName:
Full=RNA-binding protein cp31; Flags: Precursor
gi|16490|emb|CAA46347.1| RNA-binding protein [Arabidopsis thaliana]
gi|387569|gb|AAA32860.1| 31 kDa RNA binding protein [Arabidopsis thaliana]
gi|475718|gb|AAA18378.1| RNA-binding protein 1 [Arabidopsis thaliana]
gi|4220513|emb|CAA22986.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
gi|7269328|emb|CAB79387.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
gi|332659554|gb|AEE84954.1| ribonucleoprotein [Arabidopsis thaliana]
gi|737169|prf||1921382A RNA-binding protein
Length = 329
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 95/144 (65%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+Y+RET +SRGF FVTMS+V++ +E + + GR+L VN + +P+ + P
Sbjct: 181 VIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPE-RAPRV 239
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
E F+++VGNL W V L Q F E+G VV ARV+YD E+GRSRG+GFV S E+
Sbjct: 240 YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELN 299
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G LEGRA+RV++A+ R
Sbjct: 300 EAISALDGQNLEGRAIRVNVAEER 323
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNL++ V +++L F++ G V A V+Y+ E+ +SRG+GFV S+ E ETA+E
Sbjct: 151 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 210
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
N +L GR + V+ A R S
Sbjct: 211 FNRYDLNGRLLTVNKAAPRGS 231
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDRETGRSRGF FVTMS V++ N I LDG+ GR +RVN +++ P+
Sbjct: 275 VVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 326
>gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabidopsis thaliana]
gi|23505889|gb|AAN28804.1| At4g24770/F22K18_30 [Arabidopsis thaliana]
Length = 329
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 95/144 (65%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+Y+RET +SRGF FVTMS+V++ +E + + GR+L VN + +P+ + P
Sbjct: 181 VIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPE-RAPRV 239
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
E F+++VGNL W V L Q F E+G VV ARV+YD E+GRSRG+GFV S E+
Sbjct: 240 YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELN 299
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G LEGRA+RV++A+ R
Sbjct: 300 EAISALDGQNLEGRAIRVNVAEER 323
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNL++ V +++L F++ G V A V+Y+ E+ +SRG+GFV S+ E ETA+E
Sbjct: 151 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 210
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
N +L GR + V+ A R S
Sbjct: 211 FNRYDLNGRLLTVNKAAPRGS 231
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDRETGRSRGF FVTMS V++ N I LDG+ GR +RVN +++ P+
Sbjct: 275 VVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 326
>gi|21309|emb|CAA41023.1| 28kD RNA binding protein [Spinacia oleracea]
Length = 226
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 96/144 (66%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
V+Y+RET RSRGF FVTMSTVE+ +E L+G + GR L VN + P+ D
Sbjct: 79 VIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKA-APRGSPERAPRGD 137
Query: 67 F----KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
F +++VGNL W V T L Q F E+G VV ARV+ D E+GRSRG+GFV S+++E+
Sbjct: 138 FEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVN 197
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G L+GRA+RV++A+ R
Sbjct: 198 DAIAALDGQTLDGRAVRVNVAEER 221
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNL + V +E L F G V A V+Y+ E+ RSRG+GFV ST E E A+E
Sbjct: 49 KLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEL 108
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
LNG +++GR + V+ A R S
Sbjct: 109 LNGYDMDGRQLTVNKAAPRGS 129
>gi|357160118|ref|XP_003578663.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 296
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 96/147 (65%), Gaps = 10/147 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK-----LPL 61
V+Y+RET +SRGF FVTMST+E+ +E + GR+L VN K P+ P
Sbjct: 148 VIYNRETDQSRGFGFVTMSTIEEAEKAVEMFHRYDVGGRLLTVN---KAAPRGARVERPA 204
Query: 62 --YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+ + F+++VGNL W V L Q F E+G VV ARV+YD E+GRSRG+GFV +++
Sbjct: 205 RDFGGSSFRIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMASQE 264
Query: 120 EMETALESLNGVELEGRAMRVSLAQGR 146
E++ A+ +L+G LEGRA+RV++A+ R
Sbjct: 265 ELDDAIAALDGQSLEGRALRVNVAEER 291
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + + +E L Q F++ G V + V+Y+ E+ +SRG+GFV ST E E A+E
Sbjct: 118 KVYVGNLPYDIDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKAVEM 177
Query: 128 LNGVELEGRAMRVSLAQGR 146
+ ++ GR + V+ A R
Sbjct: 178 FHRYDVGGRLLTVNKAAPR 196
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDRETGRSRGF FVTM++ E+ + I LDG+ GR LRVN +++ P+
Sbjct: 243 VVYDRETGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAEERPPR 294
>gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 304
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 95/144 (65%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+Y+RET +SRGF FVTMS+V++ +E + + GR+L VN + +P+ + P
Sbjct: 156 VIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPE-RAPRV 214
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
E F+++VGNL W V L Q F E+G VV ARV+YD E+GRSRG+GFV S E+
Sbjct: 215 YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELN 274
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G LEGRA+RV++A+ R
Sbjct: 275 EAISALDGQNLEGRAIRVNVAEER 298
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNL++ V +++L F++ G V A V+Y+ E+ +SRG+GFV S+ E ETA+E
Sbjct: 126 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 185
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
N +L GR + V+ A R S
Sbjct: 186 FNRYDLNGRLLTVNKAAPRGS 206
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDRETGRSRGF FVTMS V++ N I LDG+ GR +RVN +++ P+
Sbjct: 250 VVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 301
>gi|224119514|ref|XP_002318093.1| predicted protein [Populus trichocarpa]
gi|222858766|gb|EEE96313.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 96/144 (66%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+Y+RET SRGF FVTMSTVE+ +E L + GR L VN + +P+ + P
Sbjct: 180 VIYNRETDTSRGFGFVTMSTVEESEKAVEMLHRYDLDGRFLTVNKAAPRGSRPE-RPPRV 238
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
+E ++++VGNL W V + L Q F E+G VV ARV++D E+ RSRG+GFV ST++E+
Sbjct: 239 SEPGYRIYVGNLPWDVDSGRLEQIFSEHGKVVSARVVFDRETNRSRGFGFVTMSTESELN 298
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G L+GR +RV++A+ R
Sbjct: 299 DAIAALDGQNLDGRPIRVNVAEER 322
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K+FVGNL + V +E L F++ G V A V+Y+ E+ SRG+GFV ST E E A+E
Sbjct: 150 KIFVGNLPYDVDSEKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVTMSTVEESEKAVEM 209
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
L+ +L+GR + V+ A R S
Sbjct: 210 LHRYDLDGRFLTVNKAAPRGS 230
>gi|326493824|dbj|BAJ85374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 96/146 (65%), Gaps = 9/146 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK------LP 60
V+Y+RET +SRGF FVTMST+E+ +E + GR+L VN K P+ P
Sbjct: 147 VIYNRETDQSRGFGFVTMSTIEEAEKAVEMFHRYDVNGRLLTVN---KAAPRGARVERPP 203
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ + F+++VGNL W V L + F E+G VV ARV+YD ++GRSRG+GFV +++ E
Sbjct: 204 RDSGSSFRIYVGNLPWQVDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEE 263
Query: 121 METALESLNGVELEGRAMRVSLAQGR 146
++ A+ +L+G LEGRA+RV++A+ R
Sbjct: 264 LDDAIAALDGQSLEGRALRVNVAEER 289
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + V +E L Q F++ G V + V+Y+ E+ +SRG+GFV ST E E A+E
Sbjct: 117 KVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKAVEM 176
Query: 128 LNGVELEGRAMRVSLAQGR 146
+ ++ GR + V+ A R
Sbjct: 177 FHRYDVNGRLLTVNKAAPR 195
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDR+TGRSRGF FVTM++ E+ + I LDG+ GR LRVN +++ P+
Sbjct: 241 VVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAEERPPR 292
>gi|133248|sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor
gi|19741|emb|CAA40364.1| 31kD chloroplast ribonucleoprotein [Nicotiana sylvestris]
gi|19756|emb|CAA37885.1| unnamed protein product [Nicotiana sylvestris]
Length = 315
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 98/144 (68%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+Y+R+T +SRGF FVTMSTVE+ +E + + GR+L VN + ++P+ + P
Sbjct: 167 VIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPE-RPPRT 225
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
E ++++VGN+ W + L Q F E+G VV ARV+YD E+GRSRG+GFV +++AEM
Sbjct: 226 FEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMS 285
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G L+GR +RV++A+ R
Sbjct: 286 DAIANLDGQSLDGRTIRVNVAEDR 309
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNL + V +E L + F++ G V A V+Y+ ++ +SRG+GFV ST E E A+E
Sbjct: 137 KLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEM 196
Query: 128 LNGVELEGRAMRVSLAQGR 146
N ++ GR + V+ A R
Sbjct: 197 YNRYDVNGRLLTVNKAARR 215
>gi|133247|sp|P28644.1|ROC1_SPIOL RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP
Length = 233
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 96/144 (66%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
V+Y+RET RSRGF FVTMSTVE+ +E L+G + GR L VN + P+ D
Sbjct: 86 VIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKA-APRGSPERAPRGD 144
Query: 67 F----KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
F +++VGNL W V T L Q F E+G VV ARV+ D E+GRSRG+GFV S+++E+
Sbjct: 145 FEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVN 204
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G L+GRA+RV++A+ R
Sbjct: 205 DAIAALDGQTLDGRAVRVNVAEER 228
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 9/98 (9%)
Query: 51 FSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 110
FS+ P+ + KLFVGNL + V +E L F G V A V+Y+ E+ RSRG+
Sbjct: 48 FSEPPE---------EAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGF 98
Query: 111 GFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
GFV ST E E A+E LNG +++GR + V+ A R S
Sbjct: 99 GFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGS 136
>gi|195624584|gb|ACG34122.1| ribonucleoprotein [Zea mays]
Length = 289
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 92/143 (64%), Gaps = 3/143 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL---PLYA 63
V+Y++ETG+SRGF FVTMST+E+ + IE + + GR+L VN + ++ P
Sbjct: 142 VIYNKETGQSRGFGFVTMSTIEEADKAIEMFNRYDISGRLLNVNRASPRGTRMERPPRQF 201
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
F+ +VGNL W L Q F EYG VV A V+YD E+GRSRG+GFV +K E++
Sbjct: 202 APAFRAYVGNLPWQADDSRLVQLFSEYGEVVNAAVVYDRETGRSRGFGFVTMVSKEELDD 261
Query: 124 ALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G EL+GR +RV++A R
Sbjct: 262 AISALDGQELDGRPLRVNVAAER 284
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + + +E L Q F + G V A V+Y+ E+G+SRG+GFV ST E + A+E
Sbjct: 112 KVYVGNLPYDIESEGLAQLFDQAGVVEVAEVIYNKETGQSRGFGFVTMSTIEEADKAIEM 171
Query: 128 LNGVELEGRAMRVSLAQGR 146
N ++ GR + V+ A R
Sbjct: 172 FNRYDISGRLLNVNRASPR 190
>gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thaliana]
Length = 315
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 95/144 (65%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+Y+RET +SRGF FVTMS+V++ +E + + GR+L VN + +P+ + P
Sbjct: 167 VIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPE-RAPRV 225
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
E F+++VGNL W V L Q F E+G VV ARV+YD E+GRSRG+GFV S E+
Sbjct: 226 YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELN 285
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G LEGRA+RV++A+ R
Sbjct: 286 EAISALDGQNLEGRAIRVNVAEER 309
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNL++ V +++L F++ G V A V+Y+ E+ +SRG+GFV S+ E ETA+E
Sbjct: 137 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 196
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
N +L GR + V+ A R S
Sbjct: 197 FNRYDLNGRLLTVNKAAPRGS 217
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDRETGRSRGF FVTMS V++ N I LDG+ GR +RVN +++ P+
Sbjct: 261 VVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 312
>gi|413921823|gb|AFW61755.1| ribonucleoprotein [Zea mays]
Length = 286
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 94/147 (63%), Gaps = 11/147 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPKPKL 59
V+Y+RETG+SRGF FVTMSTVE+ + IE + GR+L VN + ++P+ +
Sbjct: 139 VIYNRETGQSRGFGFVTMSTVEEADKAIEMFSRYDISGRLLNVNRASSRGTRMERPQRQF 198
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
F+ +VGNL W V L Q F E+G VV A+V+YD E+GRSRG+GFV +K
Sbjct: 199 ----APAFRAYVGNLPWQVDDSRLVQLFSEHGEVVDAKVVYDRETGRSRGFGFVSMVSKE 254
Query: 120 EMETALESLNGVELEGRAMRVSLAQGR 146
E+ A+ +L+G EL+GR +RV++A R
Sbjct: 255 ELNDAISALDGQELDGRPLRVNVAAER 281
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + V +E L Q F + G V A V+Y+ E+G+SRG+GFV ST E + A+E
Sbjct: 109 KVYVGNLPYDVDSEGLAQIFDQAGVVEVAEVIYNRETGQSRGFGFVTMSTVEEADKAIEM 168
Query: 128 LNGVELEGRAMRVSLAQGR 146
+ ++ GR + V+ A R
Sbjct: 169 FSRYDISGRLLNVNRASSR 187
>gi|212274649|ref|NP_001130287.1| uncharacterized protein LOC100191381 [Zea mays]
gi|194688754|gb|ACF78461.1| unknown [Zea mays]
gi|414870130|tpg|DAA48687.1| TPA: ribonucleoprotein [Zea mays]
Length = 289
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 92/143 (64%), Gaps = 3/143 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL---PLYA 63
V+Y++ETG+SRGF FVTMST+E+ + IE + + GR+L VN + ++ P
Sbjct: 142 VIYNKETGQSRGFGFVTMSTIEEADKAIEMFNRYDISGRLLNVNRASPRGTRMERPPRQF 201
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
F+ +VGNL W L Q F EYG VV A V+YD E+GRSRG+GFV +K E++
Sbjct: 202 APAFRAYVGNLPWQADDSRLVQLFSEYGEVVNAAVVYDRETGRSRGFGFVTMVSKEELDD 261
Query: 124 ALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G EL+GR +RV++A R
Sbjct: 262 AISALDGQELDGRPLRVNVAAER 284
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + + +E L Q F + G V A V+Y+ E+G+SRG+GFV ST E + A+E
Sbjct: 112 KVYVGNLPYDIESEGLAQLFDQAGVVEVAEVIYNKETGQSRGFGFVTMSTIEEADKAIEM 171
Query: 128 LNGVELEGRAMRVSLAQGR 146
N ++ GR + V+ A R
Sbjct: 172 FNRYDISGRLLNVNRASPR 190
>gi|147838354|emb|CAN61133.1| hypothetical protein VITISV_039575 [Vitis vinifera]
Length = 1122
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 96/144 (66%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+Y+RET RSRGF FV+MSTVE+ ++ E GR+L VN + +P+ + P
Sbjct: 974 VIYNRETDRSRGFGFVSMSTVEEAEKAVDMFHRYELDGRLLTVNKAAPRGSQPE-RPPRV 1032
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
E F+++VGNL W V + L Q F E+G VV ARV++D E+GRSRG+GFV S++ E+E
Sbjct: 1033 FEPAFRMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELE 1092
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ + +G L+GR +RV++A+ R
Sbjct: 1093 DAIAATDGQTLDGRTIRVNVAEER 1116
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K+FVGNL + V +E L + F++ G V A V+Y+ E+ RSRG+GFV ST E E A++
Sbjct: 944 KVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAVDM 1003
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
+ EL+GR + V+ A R S
Sbjct: 1004 FHRYELDGRLLTVNKAAPRGS 1024
>gi|12230585|sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName:
Full=CP29B; Flags: Precursor
gi|14135|emb|CAA43428.1| 29kD B ribonucleoprotein [Nicotiana sylvestris]
Length = 291
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 98/171 (57%), Gaps = 29/171 (16%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLY-- 62
+ V+YD+ TGRSRGF FVTMST E+ A + +G E GR +RVN P +
Sbjct: 116 VEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFG 175
Query: 63 ---------------------------AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVG 95
++ +++VGNLSW V +L + F E GNVV
Sbjct: 176 GGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVD 235
Query: 96 ARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
A+V+YD +SGRSRG+GFV YS+ E+ A++SLNGV+L+GR++RVS A+ R
Sbjct: 236 AKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEER 286
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
P ++E D KLFVGNL +SV + +L F+ GNV V+YD +GRSRG+GFV STK
Sbjct: 81 PRFSE-DLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKE 139
Query: 120 EMETALESLNGVELEGRAMRVS 141
E+E A + NG E++GRA+RV+
Sbjct: 140 EVEAAEQQFNGYEIDGRAIRVN 161
>gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum crystallinum]
Length = 289
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 94/144 (65%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+Y+RET RSRGF FVTMSTVE+ +E E GR L VN + +P+ + P
Sbjct: 142 VIYNRETDRSRGFGFVTMSTVEEAEKAVELYHKFEVNGRFLTVNKAAPRGSRPE-RAPRE 200
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
E F+++VGNL W V L Q F E+G V+ ARV+ D E+GRSRG+ FV ++++EM
Sbjct: 201 YEPSFRVYVGNLPWDVDDARLEQVFSEHGKVLSARVVSDRETGRSRGFAFVTMASESEMN 260
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G LEGRA+RV++A+ R
Sbjct: 261 EAIGALDGQTLEGRAIRVNVAEER 284
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 51/83 (61%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D KLFVGNL + V +E L Q F+ G V A V+Y+ E+ RSRG+GFV ST E E A+
Sbjct: 110 DAKLFVGNLPFDVDSEKLAQIFEGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 169
Query: 126 ESLNGVELEGRAMRVSLAQGRRS 148
E + E+ GR + V+ A R S
Sbjct: 170 ELYHKFEVNGRFLTVNKAAPRGS 192
>gi|311952|emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris]
Length = 319
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 98/154 (63%), Gaps = 12/154 (7%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK----- 56
++ + ++YDR T RSRGFAFVTM +VE+ I DG + GR ++VNF + P+
Sbjct: 135 VANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGERE 194
Query: 57 -------PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
+ ++ KL+V NLSW++T++ L AF + + A+V+YD SGRSRG
Sbjct: 195 VMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRG 254
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
+GF+ +S+ M++AL+++N VELEGR +R+++A
Sbjct: 255 FGFITFSSAEAMKSALDTMNEVELEGRPLRLNVA 288
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+VGNL +S+T+ L++ F E G V ++YD + RSRG+ FV + E + A+
Sbjct: 110 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 169
Query: 128 LNGVELEGRAMRVSLAQGRR 147
+G ++ GR ++V+ + R
Sbjct: 170 FDGSQVGGRTVKVNFPEVPR 189
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP 57
V+YDR +GRSRGF F+T S+ E + ++ ++ E GR LR+N + + P
Sbjct: 243 VIYDRSSGRSRGFGFITFSSAEAMKSALDTMNEVELEGRPLRLNVAGQKAP 293
>gi|116787606|gb|ABK24573.1| unknown [Picea sitchensis]
Length = 290
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 96/146 (65%), Gaps = 3/146 (2%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL--PLY 62
+ ++ DRETG SRGF FVTM TVE+ +E + GR+L VN + K+ P
Sbjct: 142 VNIITDRETGNSRGFGFVTMGTVEEAEKGVELFNRHSLEGRLLTVNKAAPRGTKVERPSQ 201
Query: 63 A-ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
A + K++VGNL W SL Q F E+G V+ ARV+YD E+GRSRG+GFV YS+++E+
Sbjct: 202 AGSSTNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEV 261
Query: 122 ETALESLNGVELEGRAMRVSLAQGRR 147
A+ +L+G +++GR +RV++A+ RR
Sbjct: 262 NDAIAALDGTDMDGRPLRVNIAEDRR 287
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNL +++ + L + F+ G V+ ++ D E+G SRG+GFV T E E +E
Sbjct: 114 KLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEKGVEL 173
Query: 128 LNGVELEGRAMRVSLAQGR 146
N LEGR + V+ A R
Sbjct: 174 FNRHSLEGRLLTVNKAAPR 192
>gi|475720|gb|AAA18380.1| RNA-binding protein 3 [Arabidopsis thaliana]
Length = 162
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 95/144 (65%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+Y+RET +SRGF FVTMS+V++ +E + + GR+L VN + +P+ + P
Sbjct: 14 VIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPE-RAPRV 72
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
E F+++VGNL W V L Q F E+G VV ARV+YD E+GRSRG+GFV S E+
Sbjct: 73 YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELN 132
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G LEGRA+RV++A+ R
Sbjct: 133 EAISALDGQNLEGRAIRVNVAEER 156
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDRETGRSRGF FVTMS V++ N I LDG+ GR +RVN +++ P+
Sbjct: 108 VVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 159
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 87 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
F++ G V A V+Y+ E+ +SRG+GFV S+ E ETA+E N +L GR + V+ A R
Sbjct: 3 FEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPR 62
Query: 147 RS 148
S
Sbjct: 63 GS 64
>gi|357148860|ref|XP_003574918.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 286
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 95/143 (66%), Gaps = 3/143 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL---PLYA 63
V+Y+RE+G+SRGF FVTMST+E+ + IE + + GR+L VN + + ++ P
Sbjct: 139 VIYNRESGQSRGFGFVTMSTIEEADKAIEMFNRYDISGRLLNVNRAAQRGSRVERPPRQF 198
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ F+ +VGNL W L Q F E+G V+ A V+YD E+GRSRG+GFV ++K E++
Sbjct: 199 ASAFRAYVGNLPWQAEDSRLVQLFSEHGEVLNATVVYDRETGRSRGFGFVTMASKEELDD 258
Query: 124 ALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G EL+GR +RV++A R
Sbjct: 259 AISALDGQELDGRPLRVNVAAER 281
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + V +E L Q F + G V A V+Y+ ESG+SRG+GFV ST E + A+E
Sbjct: 109 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIEM 168
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
N ++ GR + V+ A R S
Sbjct: 169 FNRYDISGRLLNVNRAAQRGS 189
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF-SDKPK 56
TV+YDRETGRSRGF FVTM++ E+ + I LDG+E GR LRVN +++P+
Sbjct: 232 TVVYDRETGRSRGFGFVTMASKEELDDAISALDGQELDGRPLRVNVAAERPQ 283
>gi|363807234|ref|NP_001242356.1| 31 kDa ribonucleoprotein, chloroplastic-like [Glycine max]
gi|255645622|gb|ACU23305.1| unknown [Glycine max]
Length = 300
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 91/145 (62%), Gaps = 8/145 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK-----LPL 61
V+Y+R T RSRGF FVTMST+E+ ++ G E GR+L VN K PK P
Sbjct: 153 VIYNRATDRSRGFGFVTMSTIEELEKAVKMFSGYELNGRVLTVN---KAAPKGAQPERPP 209
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
F+++VGNL W V L Q F E+G V ARV+YD E+GRSRG+GFV S++ +M
Sbjct: 210 RPPQSFRVYVGNLPWDVDNSRLEQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDM 269
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G L+GRA+RV++A R
Sbjct: 270 NDAIAALDGQSLDGRAIRVNVAAQR 294
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K+FVGNL + +E L F++ G V A V+Y+ + RSRG+GFV ST E+E A++
Sbjct: 123 KIFVGNLPFDFDSEKLASLFEQAGTVEVAEVIYNRATDRSRGFGFVTMSTIEELEKAVKM 182
Query: 128 LNGVELEGRAMRVSLAQGR 146
+G EL GR + V+ A +
Sbjct: 183 FSGYELNGRVLTVNKAAPK 201
>gi|116788830|gb|ABK25016.1| unknown [Picea sitchensis]
Length = 290
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 96/146 (65%), Gaps = 3/146 (2%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL--PLY 62
+ ++ DRETG SRGF FVTM TVE+ +E + GR+L VN + K+ P
Sbjct: 142 VNIITDRETGNSRGFGFVTMGTVEEAEKGVELFNRHSLEGRLLTVNKAAPRGTKVERPSQ 201
Query: 63 A-ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
A + K++VGNL W SL Q F E+G V+ ARV+YD E+GRSRG+GFV YS+++E+
Sbjct: 202 AGSSTNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEV 261
Query: 122 ETALESLNGVELEGRAMRVSLAQGRR 147
A+ +L+G +++GR +RV++A+ RR
Sbjct: 262 NDAIAALDGTDMDGRPLRVNIAEDRR 287
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNL +++ + L + F+ G V+ ++ D E+G SRG+GFV T E E +E
Sbjct: 114 KLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEKGVEL 173
Query: 128 LNGVELEGRAMRVSLAQGR 146
N LEGR + V+ A R
Sbjct: 174 FNRHSLEGRLLTVNKAAPR 192
>gi|224055617|ref|XP_002298568.1| predicted protein [Populus trichocarpa]
gi|118486956|gb|ABK95311.1| unknown [Populus trichocarpa]
gi|222845826|gb|EEE83373.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 92/142 (64%), Gaps = 2/142 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAE 64
++Y+RET +SRGF FVTMSTV++ IE + GR L VN + +P+ P +
Sbjct: 129 IIYNRETDQSRGFGFVTMSTVDEAEKAIEKFHRYDLNGRFLTVNKAAPRGSRPERPSVFK 188
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
++++VGNL W V L Q F E+G VV ARV+ D E+GRSRG+GFV S++ E+ A
Sbjct: 189 IAYRIYVGNLPWQVDDARLEQVFSEHGQVVNARVVCDRETGRSRGFGFVTMSSETELNDA 248
Query: 125 LESLNGVELEGRAMRVSLAQGR 146
+ +L+G L+GRA+ V++AQ R
Sbjct: 249 IAALDGQSLDGRAITVNIAQER 270
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGNL + V +E+L Q F + G V A ++Y+ E+ +SRG+GFV ST E E A+E
Sbjct: 99 KLYVGNLPYDVNSENLAQLFDQAGTVEVAEIIYNRETDQSRGFGFVTMSTVDEAEKAIEK 158
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
+ +L GR + V+ A R S
Sbjct: 159 FHRYDLNGRFLTVNKAAPRGS 179
>gi|193850551|gb|ACF22879.1| RNA-binding protein [Glycine max]
Length = 302
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 91/145 (62%), Gaps = 8/145 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK-----LPL 61
V+Y+R T RSRGF FVTMST+E+ ++ G E GR+L VN K PK P
Sbjct: 155 VIYNRATDRSRGFGFVTMSTIEELEKAVKMFSGYELNGRVLTVN---KAAPKGAQPERPP 211
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
F+++VGNL W V L Q F E+G V ARV+YD E+GRSRG+GFV S++ +M
Sbjct: 212 RPPQSFRVYVGNLPWDVDNSRLEQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDM 271
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G L+GRA+RV++A R
Sbjct: 272 NDAIAALDGQSLDGRAIRVNVAAQR 296
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K+FVGNL + +E L F++ G V A V+Y+ + RSRG+GFV ST E+E A++
Sbjct: 125 KIFVGNLPFDFDSEKLASLFEQAGTVEVAEVIYNRATDRSRGFGFVTMSTIEELEKAVKM 184
Query: 128 LNGVELEGRAMRVSLAQGR 146
+G EL GR + V+ A +
Sbjct: 185 FSGYELNGRVLTVNKAAPK 203
>gi|3550467|emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 96/146 (65%), Gaps = 9/146 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK------LP 60
V+Y+RET +SRGF FVTMST+E+ +E + GR+L VN K P+ P
Sbjct: 147 VIYNRETDQSRGFGFVTMSTIEEAEKAVEMFHRYDVNGRLLTVN---KAAPRGARVERPP 203
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ + F+++VGNL W V L + F E+G VV A+V+YD ++GRSRG+GFV +++ E
Sbjct: 204 RDSGSSFRIYVGNLPWQVDDSRLVELFSEHGKVVDAKVVYDRDTGRSRGFGFVTMASQEE 263
Query: 121 METALESLNGVELEGRAMRVSLAQGR 146
++ A+ +L+G LEGRA+RV++A+ R
Sbjct: 264 LDDAIAALDGQSLEGRALRVNVAEER 289
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + V +E L Q F++ G V + V+Y+ E+ +SRG+GFV ST E E A+E
Sbjct: 117 KVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKAVEM 176
Query: 128 LNGVELEGRAMRVSLAQGR 146
+ ++ GR + V+ A R
Sbjct: 177 FHRYDVNGRLLTVNKAAPR 195
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDR+TGRSRGF FVTM++ E+ + I LDG+ GR LRVN +++ P+
Sbjct: 241 VVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAEERPPR 292
>gi|3550483|emb|CAA11893.1| cp31BHv [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 95/143 (66%), Gaps = 3/143 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL---PLYA 63
V+Y++E+G+SRGF FVTMST+E+ + IE + GR+L VN + + ++ P
Sbjct: 136 VIYNKESGQSRGFGFVTMSTIEEADKAIETFNRYNISGRLLNVNRAAQRGSRVERPPRQF 195
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ F+ +VGNL W L Q F E+G VV A ++YD E+GRSRG+GFV ++K ++++
Sbjct: 196 ASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDS 255
Query: 124 ALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G E++GR +RV++A R
Sbjct: 256 AISALDGQEMDGRPLRVNVAAER 278
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + V +E L Q F + G V A V+Y+ ESG+SRG+GFV ST E + A+E+
Sbjct: 106 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNKESGQSRGFGFVTMSTIEEADKAIET 165
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
N + GR + V+ A R S
Sbjct: 166 FNRYNISGRLLNVNRAAQRGS 186
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF-SDKPK 56
T++YDRETGRSRGF FVTM++ ED ++ I LDG+E GR LRVN +++P+
Sbjct: 229 TIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQ 280
>gi|162463757|ref|NP_001105347.1| nucleic acid binding protein1 [Zea mays]
gi|168526|gb|AAA33486.1| nucleic acid-binding protein [Zea mays]
gi|195637380|gb|ACG38158.1| ribonucleoprotein [Zea mays]
gi|219884029|gb|ACL52389.1| unknown [Zea mays]
gi|414884557|tpg|DAA60571.1| TPA: nucleic acid binding protein1 [Zea mays]
Length = 303
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 95/147 (64%), Gaps = 11/147 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPKPKL 59
V+Y+RET +SRGF FVTMSTVE+ +E + GR+L VN + D+P
Sbjct: 156 VIYNRETDQSRGFGFVTMSTVEEAEKAVEMFHRYDVNGRLLTVNKAAPRGSRVDRP---- 211
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
P + +++VGNL W V L + F E+G VV ARV+YD E+GRSRG+GFV +++
Sbjct: 212 PRQSGPSLRIYVGNLPWQVDDSRLVELFSEHGKVVDARVVYDRETGRSRGFGFVTMASQD 271
Query: 120 EMETALESLNGVELEGRAMRVSLAQGR 146
E++ A+ +L+G L+GRA+RV++A+ R
Sbjct: 272 ELDDAIAALDGQSLDGRALRVNVAEER 298
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + V +E L Q F + G V A V+Y+ E+ +SRG+GFV ST E E A+E
Sbjct: 126 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAVEM 185
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
+ ++ GR + V+ A R S
Sbjct: 186 FHRYDVNGRLLTVNKAAPRGS 206
>gi|133249|sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor
gi|100390|pir||S12111 ribonucleoprotein, 33K, precursor - common tobacco
gi|20005|emb|CAA37879.1| unnamed protein product [Nicotiana tabacum]
Length = 324
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 97/154 (62%), Gaps = 12/154 (7%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK----- 56
++ + ++YDR T RSRGFAFVTM +VE+ I DG + GR ++VNF + P+
Sbjct: 140 VANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGERE 199
Query: 57 -------PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
+ ++ KL+V NLSW++T++ L AF + + A+V+YD SGRSRG
Sbjct: 200 VMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRG 259
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
+GF+ +S+ M +AL+++N VELEGR +R+++A
Sbjct: 260 FGFITFSSAEAMNSALDTMNEVELEGRPLRLNVA 293
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+VGNL +S+T+ L++ F E G V ++YD + RSRG+ FV + E + A+
Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174
Query: 128 LNGVELEGRAMRVSLAQGRR 147
+G ++ GR ++V+ + R
Sbjct: 175 FDGSQVGGRTVKVNFPEVPR 194
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP 57
V+YDR +GRSRGF F+T S+ E N+ ++ ++ E GR LR+N + + P
Sbjct: 248 VIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVAGQKAP 298
>gi|356513816|ref|XP_003525605.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 299
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 93/151 (61%), Gaps = 12/151 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK-------- 58
V+Y+R T RSRGF FVTMST+E+ +E G E GR+L VN K PK
Sbjct: 148 VIYNRATDRSRGFGFVTMSTLEELKKAVEMFSGYELNGRVLTVN---KAAPKGAQPERPP 204
Query: 59 -LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
P + +++VGNL W V L Q F E+G V ARV+YD E+GRSRG+GFV S+
Sbjct: 205 RPPRSFSSGLRVYVGNLPWEVDDARLEQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSS 264
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+ +M A+ +L+G L+GRA+RV++AQ R S
Sbjct: 265 ETDMNDAIAALDGQSLDGRAIRVNVAQDRPS 295
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AE D K+FVGNL + + +E+L F + G V A V+Y+ + RSRG+GFV ST E++
Sbjct: 114 AEED-KIFVGNLPFDIDSENLASLFGQAGTVEVAEVIYNRATDRSRGFGFVTMSTLEELK 172
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+E +G EL GR + V+ A +
Sbjct: 173 KAVEMFSGYELNGRVLTVNKAAPK 196
>gi|148908208|gb|ABR17219.1| unknown [Picea sitchensis]
Length = 296
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 88/143 (61%), Gaps = 14/143 (9%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL----- 61
V+ + ETG SRGFAFVTMSTV + A IE L G + GR + VNF P L
Sbjct: 133 VVRNEETGLSRGFAFVTMSTVIEAKAAIEKLQGSDLGGRDMIVNF-----PAAVLSRGNK 187
Query: 62 ----YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
Y ET ++LF GNL+WSV E L F E+G V+GA+V+Y+ + G R +GFVC S+
Sbjct: 188 TEDEYVETPYQLFAGNLAWSVKNEILRDLFSEHGTVLGAKVVYNSKGGVPRAFGFVCLSS 247
Query: 118 KAEMETALESLNGVELEGRAMRV 140
++EME A+ SLNG E GR + V
Sbjct: 248 QSEMEAAIVSLNGKEFHGRNLVV 270
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 46/75 (61%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGNL S + LT FQE+G V A V+ + E+G SRG+ FV ST E + A+E
Sbjct: 103 KLYVGNLPRSCDSAQLTHLFQEFGTVESAEVVRNEETGLSRGFAFVTMSTVIEAKAAIEK 162
Query: 128 LNGVELEGRAMRVSL 142
L G +L GR M V+
Sbjct: 163 LQGSDLGGRDMIVNF 177
>gi|359806184|ref|NP_001240946.1| uncharacterized protein LOC100812934 [Glycine max]
gi|255639723|gb|ACU20155.1| unknown [Glycine max]
Length = 279
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 99/156 (63%), Gaps = 16/156 (10%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP--KPKLPLY-- 62
V+YD+ TGRSRGF FVTMS+VE+ A + +G E GR LRVN P P +
Sbjct: 120 VIYDKTTGRSRGFGFVTMSSVEEAEAAAKQFNGYELDGRSLRVNSGPPPARNESAPRFRG 179
Query: 63 -----------AETDFKLFVGNLSWSVTTESLTQAFQEYGN-VVGARVLYDGESGRSRGY 110
++++ ++ VGNL+W V +L F+E G V+ ARV+YD ESGRSRG+
Sbjct: 180 GSSFGSRGGGPSDSENRVHVGNLAWGVDDVALESLFREQGKKVLEARVIYDRESGRSRGF 239
Query: 111 GFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
GFV + + E+++A++SL+GV+L GRA+RVSLA +
Sbjct: 240 GFVTFGSPDEVKSAIQSLDGVDLNGRAIRVSLADSK 275
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D KLFVGNL +SV + L + F+ GNV V+YD +GRSRG+GFV S+ E E A
Sbjct: 88 DLKLFVGNLPFSVDSARLAELFESAGNVEVVEVIYDKTTGRSRGFGFVTMSSVEEAEAAA 147
Query: 126 ESLNGVELEGRAMRVS 141
+ NG EL+GR++RV+
Sbjct: 148 KQFNGYELDGRSLRVN 163
>gi|356525630|ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Glycine
max]
Length = 246
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 98/151 (64%), Gaps = 9/151 (5%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP--KPKL 59
+ K V+YD+ +GRSR FAFVTM TVED AVIE L+G E GR ++VN ++KP P L
Sbjct: 96 VEKAEVMYDKYSGRSRRFAFVTMKTVEDATAVIEKLNGTEIGGREVKVNVTEKPLSTPDL 155
Query: 60 PL-------YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
PL + ++ K++VGNL+ +VTT++L F E G V+ A+V + +S GYGF
Sbjct: 156 PLLQAEESEFIDSPHKVYVGNLAKTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGF 215
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLA 143
V +S++ ++E A+ S N LEG+ +RV+ A
Sbjct: 216 VTFSSEEDVEAAISSFNNSLLEGQTIRVNKA 246
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+VGN+ +VT E L + QE+G V A V+YD SGRSR + FV T + +E
Sbjct: 71 RLYVGNIPRTVTNEELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDATAVIEK 130
Query: 128 LNGVELEGRAMRVSLAQ 144
LNG E+ GR ++V++ +
Sbjct: 131 LNGTEIGGREVKVNVTE 147
>gi|115453241|ref|NP_001050221.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|18921322|gb|AAL82527.1|AC084766_13 putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|108708430|gb|ABF96225.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548692|dbj|BAF12135.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|125586437|gb|EAZ27101.1| hypothetical protein OsJ_11032 [Oryza sativa Japonica Group]
gi|215697052|dbj|BAG91046.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766568|dbj|BAG98727.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 97/148 (65%), Gaps = 9/148 (6%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK------ 58
+ V+YD+ TGRSRGF FVTMS+VE+ A +E +G GR LRVN S P P+
Sbjct: 115 VEVIYDKLTGRSRGFGFVTMSSVEEVEAAVEQFNGYILDGRSLRVN-SGPPPPREQSSQR 173
Query: 59 LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
P E + +++VGNLSW V +L F G V+ A+V+YD ESGRSRG+GFV Y +
Sbjct: 174 AP-RGEAN-RVYVGNLSWGVDNAALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSA 231
Query: 119 AEMETALESLNGVELEGRAMRVSLAQGR 146
E+E A+ +L+G +++GR +RV++A+ +
Sbjct: 232 EEVENAVSNLDGADMDGRQIRVTVAESK 259
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D ++FVGNL +SV + L F++ G+V V+YD +GRSRG+GFV S+ E+E A+
Sbjct: 85 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAV 144
Query: 126 ESLNGVELEGRAMRVS 141
E NG L+GR++RV+
Sbjct: 145 EQFNGYILDGRSLRVN 160
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDRE+GRSRGF FVT + E+ + NLDG + GR +RV ++ P+
Sbjct: 211 VIYDRESGRSRGFGFVTYGSAEEVENAVSNLDGADMDGRQIRVTVAESKPPR 262
>gi|125544079|gb|EAY90218.1| hypothetical protein OsI_11785 [Oryza sativa Indica Group]
Length = 265
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 97/148 (65%), Gaps = 9/148 (6%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK------ 58
+ V+YD+ TGRSRGF FVTMS+VE+ A +E +G GR LRVN S P P+
Sbjct: 115 VEVIYDKLTGRSRGFGFVTMSSVEEVEAAVEQFNGYILDGRSLRVN-SGPPPPREQSSRR 173
Query: 59 LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
P E + +++VGNLSW V +L F G V+ A+V+YD ESGRSRG+GFV Y +
Sbjct: 174 AP-RGEAN-RVYVGNLSWGVDNAALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSA 231
Query: 119 AEMETALESLNGVELEGRAMRVSLAQGR 146
E+E A+ +L+G +++GR +RV++A+ +
Sbjct: 232 EEVENAVSNLDGADMDGRQIRVTVAESK 259
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D ++FVGNL +SV + L F++ G+V V+YD +GRSRG+GFV S+ E+E A+
Sbjct: 85 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAV 144
Query: 126 ESLNGVELEGRAMRVS 141
E NG L+GR++RV+
Sbjct: 145 EQFNGYILDGRSLRVN 160
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDRE+GRSRGF FVT + E+ + NLDG + GR +RV ++ P+
Sbjct: 211 VIYDRESGRSRGFGFVTYGSAEEVENAVSNLDGADMDGRQIRVTVAESKPPR 262
>gi|1350821|sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP31; Flags: Precursor
gi|19710|emb|CAA46233.1| RNA binding protein 31 [Nicotiana plumbaginifolia]
Length = 292
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 98/171 (57%), Gaps = 29/171 (16%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLY-- 62
+ V+YD+ +GRSRGF FVTMST E+ A + +G E GR +RVN P +
Sbjct: 117 VEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFG 176
Query: 63 ---------------------------AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVG 95
++ +++VGNLSW V +L + F E GNVV
Sbjct: 177 GGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVD 236
Query: 96 ARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
A+V+YD +SGRSRG+GFV YS+ E+ A++SLNG++L+GR++RVS A+ R
Sbjct: 237 AKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEER 287
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
P ++E D KLFVGNL +SV + +L F+ GNV V+YD SGRSRG+GFV STK
Sbjct: 82 PRFSE-DLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKE 140
Query: 120 EMETALESLNGVELEGRAMRVS 141
E+E A + NG E++GRA+RV+
Sbjct: 141 EVEAAEQQFNGYEIDGRAIRVN 162
>gi|224133740|ref|XP_002321649.1| predicted protein [Populus trichocarpa]
gi|222868645|gb|EEF05776.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 97/144 (67%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+Y+ ET SRGF FVTMSTVE+ + IE + GR+L VN + +P+ + P
Sbjct: 147 VIYNTETDTSRGFGFVTMSTVEESDKAIEMFNRYNLDGRLLTVNKAAPRGSRPE-RPPRV 205
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
+E ++++VGNL W V + L + F E+G VV A+V+ D E+GRSRG+GFV S+++E+
Sbjct: 206 SEPSYRIYVGNLPWGVDSGRLEEVFSEHGKVVSAQVVSDWETGRSRGFGFVTMSSESELN 265
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G EL+GRA+RV++A R
Sbjct: 266 DAIAALDGQELDGRAIRVNVAAER 289
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + VT+E L F + G V + V+Y+ E+ SRG+GFV ST E + A+E
Sbjct: 117 KIYVGNLPYDVTSEKLAMLFDQAGTVEISEVIYNTETDTSRGFGFVTMSTVEESDKAIEM 176
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
N L+GR + V+ A R S
Sbjct: 177 FNRYNLDGRLLTVNKAAPRGS 197
>gi|414883566|tpg|DAA59580.1| TPA: hypothetical protein ZEAMMB73_267259 [Zea mays]
Length = 277
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 94/151 (62%), Gaps = 18/151 (11%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++YD+ T RSRGFAFVTM+T E+ I+ DG GR RVN+ P++P E
Sbjct: 79 IIYDKVTNRSRGFAFVTMATAEEAAKAIQMFDGALLGGRTARVNY-----PEVPRGGERR 133
Query: 66 ------------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
+K++ GNL W V ++L F+ ++ ARV+++ E+GRSRG+GFV
Sbjct: 134 TVTMSGRRRDDGTYKIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFV 193
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+ST + + ALESL+GVELEGR++R+SLA+
Sbjct: 194 SFSTAEDAQAALESLDGVELEGRSLRLSLAE 224
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK-PKPKLP 60
V+++RETGRSRGF FV+ ST ED A +E+LDG E GR LR++ +++ P P P
Sbjct: 178 VIFERETGRSRGFGFVSFSTAEDAQAALESLDGVELEGRSLRLSLAEQNPPPGSP 232
>gi|357440093|ref|XP_003590324.1| 33 kDa ribonucleoprotein [Medicago truncatula]
gi|355479372|gb|AES60575.1| 33 kDa ribonucleoprotein [Medicago truncatula]
Length = 311
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 93/154 (60%), Gaps = 18/154 (11%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL----- 61
+LYD T RSRGFAFVTM VED I DG GR ++VNF P++P+
Sbjct: 139 ILYDDITNRSRGFAFVTMGNVEDAEEAIRMFDGTTVGGRAIKVNF-----PEVPIVGKRV 193
Query: 62 --------YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
Y ++ K++ GNL W +T++ L +AF + ++ A+V+Y+ +G+SRGYGFV
Sbjct: 194 QMGSTYRGYVDSPHKIYAGNLGWDMTSQYLRKAFAKQPGLLSAKVVYERNNGKSRGYGFV 253
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSLAQGRR 147
+ T ++E AL ++NGVE++GR +R+ LA R
Sbjct: 254 SFETAEDVEVALSAMNGVEVQGRPLRLKLAVDNR 287
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+LFVGNL +S+++ L Q F E GNVV +LYD + RSRG+ FV + E A+
Sbjct: 109 RLFVGNLPFSLSSSQLAQLFGEAGNVVSVEILYDDITNRSRGFAFVTMGNVEDAEEAIRM 168
Query: 128 LNGVELEGRAMRVSLAQ 144
+G + GRA++V+ +
Sbjct: 169 FDGTTVGGRAIKVNFPE 185
>gi|226533870|gb|ACO71288.1| cp31BHv [Triticum aestivum]
Length = 170
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 92/137 (67%), Gaps = 3/137 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL---PLYA 63
V+Y+RE+G+SRGF FVTMST+E+ + IE + + GR+L VN + + ++ P
Sbjct: 34 VIYNRESGQSRGFGFVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQF 93
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ F+ +VGNL W L Q F E+G VV A V+YD E+GRSRG+GFV ++K ++++
Sbjct: 94 ASSFRAYVGNLPWQAEDSRLVQLFSEHGEVVNATVVYDRETGRSRGFGFVTMASKEDLDS 153
Query: 124 ALESLNGVELEGRAMRV 140
A+ +L+G E++GR +RV
Sbjct: 154 AISALDGQEMDGRPLRV 170
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + V +E L Q F + G V A V+Y+ ESG+SRG+GFV ST E + A+E+
Sbjct: 4 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 63
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
N ++ GR + V+ A R S
Sbjct: 64 FNRYDISGRLLNVNRAAQRGS 84
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
TV+YDRETGRSRGF FVTM++ ED ++ I LDG+E GR LRV
Sbjct: 127 TVVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 170
>gi|388508864|gb|AFK42498.1| unknown [Medicago truncatula]
Length = 300
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 89/143 (62%), Gaps = 3/143 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK---PKPKLPLYA 63
V+Y+R+T RSRGF FVTMST E+ + G E GR+L VN + P+ + P
Sbjct: 153 VIYNRDTDRSRGFGFVTMSTSEEVERAVNKFSGFELDGRLLTVNNAAPRGTPRLRQPRTF 212
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ + +VGNL W V SL Q F E+G V A+V+YD E+GR RG+GFV S +AEM
Sbjct: 213 NSGLRAYVGNLPWDVDNSSLEQLFSEHGKVESAQVVYDRETGRLRGFGFVTMSNEAEMND 272
Query: 124 ALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G GRA+RV++A+ R
Sbjct: 273 AIAALDGQSFNGRAIRVNVAEER 295
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D K+FVGNL + V +E L Q F++ G V A V+Y+ ++ RSRG+GFV ST E+E A+
Sbjct: 121 DLKIFVGNLPFDVDSEKLAQLFEQSGTVEIAEVIYNRDTDRSRGFGFVTMSTSEEVERAV 180
Query: 126 ESLNGVELEGRAMRVSLAQGR 146
+G EL+GR + V+ A R
Sbjct: 181 NKFSGFELDGRLLTVNNAAPR 201
>gi|297827229|ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata]
gi|297327336|gb|EFH57756.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 95/169 (56%), Gaps = 32/169 (18%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V+YD+ TGRSRGF FVTMS+V + A +G E GR LRVN + P PK E
Sbjct: 120 VEVIYDKVTGRSRGFGFVTMSSVSEVEAAANQFNGYELDGRPLRVN-AGPPPPKR----E 174
Query: 65 TDF---------------------------KLFVGNLSWSVTTESLTQAFQEYGNVVGAR 97
F +++VGNLSW V +L F E G VV AR
Sbjct: 175 DGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFAEQGKVVEAR 234
Query: 98 VLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
V+YD +SGRS+G+GFV Y++ E++ A+ SLNG +L+GR +RVS A+ R
Sbjct: 235 VIYDRDSGRSKGFGFVTYNSSQEVQNAINSLNGADLDGRQIRVSEAEAR 283
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 51 FSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 110
F+D P+ ++ D KLFVGNL ++V + L Q F+ GNV V+YD +GRSRG+
Sbjct: 76 FADDAAPQQQSFS-ADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGF 134
Query: 111 GFVCYSTKAEMETALESLNGVELEGRAMRVS 141
GFV S+ +E+E A NG EL+GR +RV+
Sbjct: 135 GFVTMSSVSEVEAAANQFNGYELDGRPLRVN 165
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDR++GRS+GF FVT ++ ++ I +L+G + GR +RV+ ++ P+
Sbjct: 235 VIYDRDSGRSKGFGFVTYNSSQEVQNAINSLNGADLDGRQIRVSEAEARPPR 286
>gi|226497258|ref|NP_001140274.1| uncharacterized protein LOC100272318 [Zea mays]
gi|194698792|gb|ACF83480.1| unknown [Zea mays]
gi|414883568|tpg|DAA59582.1| TPA: ribonucleoprotein [Zea mays]
Length = 341
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 94/151 (62%), Gaps = 18/151 (11%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++YD+ T RSRGFAFVTM+T E+ I+ DG GR RVN+ P++P E
Sbjct: 143 IIYDKVTNRSRGFAFVTMATAEEAAKAIQMFDGALLGGRTARVNY-----PEVPRGGERR 197
Query: 66 ------------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
+K++ GNL W V ++L F+ ++ ARV+++ E+GRSRG+GFV
Sbjct: 198 TVTMSGRRRDDGTYKIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFV 257
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+ST + + ALESL+GVELEGR++R+SLA+
Sbjct: 258 SFSTAEDAQAALESLDGVELEGRSLRLSLAE 288
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%)
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
P + +LFVGNL ++ T+E L Q F E G V A+++YD + RSRG+ FV +T
Sbjct: 105 PPRGDDPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAE 164
Query: 120 EMETALESLNGVELEGRAMRVSLAQ 144
E A++ +G L GR RV+ +
Sbjct: 165 EAAKAIQMFDGALLGGRTARVNYPE 189
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK-PKPKLP 60
V+++RETGRSRGF FV+ ST ED A +E+LDG E GR LR++ +++ P P P
Sbjct: 242 VIFERETGRSRGFGFVSFSTAEDAQAALESLDGVELEGRSLRLSLAEQNPPPGSP 296
>gi|195611722|gb|ACG27691.1| ribonucleoprotein [Zea mays]
Length = 341
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 93/151 (61%), Gaps = 18/151 (11%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++YD+ T RSRGFAFVTM+T E+ I+ DG GR RVN+ P++P E
Sbjct: 143 IIYDKVTNRSRGFAFVTMATAEEAAKAIQMFDGALLGGRTARVNY-----PEVPRGGERR 197
Query: 66 ------------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
+K++ GNL W V ++L F+ ++ ARV+++ E+GRSRG+GFV
Sbjct: 198 TVTMSGRRRDDGTYKIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFV 257
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+ST + + ALESL+GVELEGR +R+SLA+
Sbjct: 258 SFSTAEDAQAALESLDGVELEGRPLRLSLAE 288
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%)
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
P + +LFVGNL ++ T+E L Q F E G V A+++YD + RSRG+ FV +T
Sbjct: 105 PPRGDDPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAE 164
Query: 120 EMETALESLNGVELEGRAMRVSLAQ 144
E A++ +G L GR RV+ +
Sbjct: 165 EAAKAIQMFDGALLGGRTARVNYPE 189
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK-PKPKLP 60
V+++RETGRSRGF FV+ ST ED A +E+LDG E GR LR++ +++ P P P
Sbjct: 242 VIFERETGRSRGFGFVSFSTAEDAQAALESLDGVELEGRPLRLSLAEQNPPPGSP 296
>gi|15228102|ref|NP_181259.1| ribonucleoprotein [Arabidopsis thaliana]
gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName: Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
Precursor
gi|13877809|gb|AAK43982.1|AF370167_1 putative RNA-binding protein [Arabidopsis thaliana]
gi|4056477|gb|AAC98043.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|15081717|gb|AAK82513.1| At2g37220/F3G5.1 [Arabidopsis thaliana]
gi|16323482|gb|AAL15235.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20197716|gb|AAM15222.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330254275|gb|AEC09369.1| ribonucleoprotein [Arabidopsis thaliana]
Length = 289
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 96/169 (56%), Gaps = 32/169 (18%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V+YD+ TGRSRGF FVTMS+V + A + +G E GR LRVN + P PK E
Sbjct: 120 VEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVN-AGPPPPKR----E 174
Query: 65 TDF---------------------------KLFVGNLSWSVTTESLTQAFQEYGNVVGAR 97
F +++VGNLSW V +L F E G VV AR
Sbjct: 175 DGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEAR 234
Query: 98 VLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
V+YD +SGRS+G+GFV Y + E++ A++SL+G +L+GR +RVS A+ R
Sbjct: 235 VIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEAR 283
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 51 FSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 110
F+D PK ++ D KLFVGNL ++V + L Q F+ GNV V+YD +GRSRG+
Sbjct: 76 FADVAPPKEQSFS-ADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGF 134
Query: 111 GFVCYSTKAEMETALESLNGVELEGRAMRVS 141
GFV S+ +E+E A + NG EL+GR +RV+
Sbjct: 135 GFVTMSSVSEVEAAAQQFNGYELDGRPLRVN 165
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDR++GRS+GF FVT + ++ I++LDG + GR +RV+ ++ P+
Sbjct: 235 VIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPR 286
>gi|21617920|gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 289
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 96/169 (56%), Gaps = 32/169 (18%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V+YD+ TGRSRGF FVTMS+V + A + +G E GR LRVN + P PK E
Sbjct: 120 VEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVN-AGPPPPKR----E 174
Query: 65 TDF---------------------------KLFVGNLSWSVTTESLTQAFQEYGNVVGAR 97
F +++VGNLSW V +L F E G VV AR
Sbjct: 175 DGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEAR 234
Query: 98 VLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
V+YD +SGRS+G+GFV Y + E++ A++SL+G +L+GR +RVS A+ R
Sbjct: 235 VIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEAR 283
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 51 FSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 110
F+D PK ++ D KLFVGNL ++V + L Q F+ GNV V+YD +GRSRG+
Sbjct: 76 FADVAPPKEQSFS-ADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGF 134
Query: 111 GFVCYSTKAEMETALESLNGVELEGRAMRVS 141
GFV S+ +E+E A + NG EL+GR +RV+
Sbjct: 135 GFVTMSSVSEVEAAAQQFNGYELDGRPLRVN 165
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDR++GRS+GF FVT + ++ I++LDG + GR +RV+ ++ P+
Sbjct: 235 VIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPR 286
>gi|326503656|dbj|BAJ86334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 100/162 (61%), Gaps = 20/162 (12%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V+YD+ TGRSRGF FVTMSTVE+ +E L+G GR L+VN S P PK
Sbjct: 103 VEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNGYVLDGRALKVN-SGPPPPKDQSSPR 161
Query: 65 T-------------------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG 105
D +++VGNLSW+V +L F E G+V+GARV+YD ESG
Sbjct: 162 GFREQSGGFRQQSSRGPSGGDNRVYVGNLSWNVDDSALANLFNEQGSVLGARVIYDRESG 221
Query: 106 RSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRR 147
RSRG+GFV Y T E++ A+ +L+G +++GR +RV++A+ R+
Sbjct: 222 RSRGFGFVTYGTSDEVQKAVSNLDGTDMDGRQIRVTVAEARQ 263
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 53/76 (69%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D ++FVGNL +SV + L F++ G+V V+YD +GRSRG+GFV ST E+E A+
Sbjct: 73 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 132
Query: 126 ESLNGVELEGRAMRVS 141
E LNG L+GRA++V+
Sbjct: 133 ERLNGYVLDGRALKVN 148
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDRE+GRSRGF FVT T ++ + NLDG + GR +RV ++ +P+
Sbjct: 214 VIYDRESGRSRGFGFVTYGTSDEVQKAVSNLDGTDMDGRQIRVTVAEARQPR 265
>gi|242048706|ref|XP_002462099.1| hypothetical protein SORBIDRAFT_02g018650 [Sorghum bicolor]
gi|241925476|gb|EER98620.1| hypothetical protein SORBIDRAFT_02g018650 [Sorghum bicolor]
Length = 242
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 95/145 (65%), Gaps = 8/145 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL------- 59
V+YD+ T RSR F FVTMSTVE+ NA +E L+G E GR ++VN ++ P +
Sbjct: 98 VMYDKYTNRSRRFGFVTMSTVEEANAAVEALNGTEVGGRKIKVNVTESFLPNIDRSAPES 157
Query: 60 -PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
P++ ++ +K++VGNL+ +VTTE L F E G ++ A V + + +S+GYGFV +S++
Sbjct: 158 EPVFVDSQYKVYVGNLAKNVTTEVLKNFFSEKGKILSATVSHIPGTSKSKGYGFVTFSSE 217
Query: 119 AEMETALESLNGVELEGRAMRVSLA 143
E+E A+ + N ELEG+ +RV+ A
Sbjct: 218 EEVEAAVATFNNAELEGQPIRVNRA 242
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGN+ +VT + L F +G V A V+YD + RSR +GFV ST E A+E+
Sbjct: 68 KLYVGNVPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTVEEANAAVEA 127
Query: 128 LNGVELEGRAMRVSLAQ 144
LNG E+ GR ++V++ +
Sbjct: 128 LNGTEVGGRKIKVNVTE 144
>gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
gi|9759027|dbj|BAB09396.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|14532488|gb|AAK63972.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gi|18655365|gb|AAL76138.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gi|332008535|gb|AED95918.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
Length = 289
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 95/144 (65%), Gaps = 5/144 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLY 62
V+Y+R+T +SRGF FVTMSTVE+ +E + E GR L VN + +P+ + P
Sbjct: 144 VIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRAAPRGSRPE-RQPRV 202
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
+ F+++VGNL W V + L + F E+G VV ARV+ D E+GRSRG+GFV S + E+
Sbjct: 203 YDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVN 262
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+ +L+G LEGRA++V++A+ R
Sbjct: 263 VAIAALDGQNLEGRAIKVNVAEER 286
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P+ P A KLFVGNL + V +++L F++ G V + V+Y+ ++ +SRG+GFV S
Sbjct: 107 PEPPEEA----KLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMS 162
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
T E E A+E N E+ GR + V+ A R S
Sbjct: 163 TVEEAEKAVEKFNSFEVNGRRLTVNRAAPRGS 194
>gi|2330647|emb|CAA74889.1| ribonucleoprotein [Pisum sativum]
gi|10179830|gb|AAG13900.1| 33 kDa ribonucleoprotein [Pisum sativum]
Length = 291
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 91/149 (61%), Gaps = 12/149 (8%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA--- 63
V+Y+RET +SRGF FVTMSTVE+ A + +Y GR L VN K P+
Sbjct: 140 VIYNRETDQSRGFGFVTMSTVEEAEAGAAKFNRYDYNGRPLTVN---KAAPRGSRPEREE 196
Query: 64 ------ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
E +++VGNLSW + L Q F E+G VV ARV+YD E+GRSRG+GFV S
Sbjct: 197 RPPRTFEPVLRVYVGNLSWELDDSRLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSD 256
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQGR 146
+ EM A+ +L+G LEGR ++VS+A+ R
Sbjct: 257 EKEMNDAIAALDGQILEGRTIKVSVAEDR 285
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 46/83 (55%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D KLFVGNL + V +E L F+ G V A V+Y+ E+ +SRG+GFV ST E E
Sbjct: 108 DAKLFVGNLPYDVDSEKLAMLFEPAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEAGA 167
Query: 126 ESLNGVELEGRAMRVSLAQGRRS 148
N + GR + V+ A R S
Sbjct: 168 AKFNRYDYNGRPLTVNKAAPRGS 190
>gi|226502782|ref|NP_001151728.1| ribonucleoprotein A [Zea mays]
gi|195649373|gb|ACG44154.1| ribonucleoprotein A [Zea mays]
gi|414591006|tpg|DAA41577.1| TPA: ribonucleoprotein A [Zea mays]
Length = 268
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 97/156 (62%), Gaps = 14/156 (8%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----PKL 59
+ V+YDR TGRSRGF FVTMS+ E+ A +E +G + GR LRVN P P+
Sbjct: 108 VEVVYDRMTGRSRGFGFVTMSSAEEAEAAVEQFNGYAFQGRQLRVNCGPPPPRDESTPRA 167
Query: 60 P---------LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 110
P + ++ K++VGNL+W V +L F E G V+ A+V+YD +SGRSRG+
Sbjct: 168 PRGGGGGGGGGFVDSANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGF 227
Query: 111 GFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
GFV Y + E+ A+ +L+G++L+GR +RV+ A+ +
Sbjct: 228 GFVTYGSAQEVNNAISNLDGIDLDGRQIRVTAAESK 263
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D KLFVGNL +SV + L F++ G+V V+YD +GRSRG+GFV S+ E E A+
Sbjct: 78 DLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAEAAV 137
Query: 126 ESLNGVELEGRAMRVS 141
E NG +GR +RV+
Sbjct: 138 EQFNGYAFQGRQLRVN 153
>gi|326511132|dbj|BAJ87580.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 97/155 (62%), Gaps = 13/155 (8%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK----- 56
+ + ++YD+ T RSRGFAFVTM+T E+ ++ +G GR +RVNF + P+
Sbjct: 134 VDDVQIIYDKITDRSRGFAFVTMATAEEAAKAVQMFNGALLGGRTVRVNFPEVPRGGERA 193
Query: 57 --------PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSR 108
L + + +K++ GNL W V ++L AF+ +VGARV+++ ++GRSR
Sbjct: 194 VASAAVARTSLRVVDDGTYKVYAGNLGWGVRADALKTAFEGQPGLVGARVIFERDTGRSR 253
Query: 109 GYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
G+GFV + T + + AL++++GVEL+GR +R+SLA
Sbjct: 254 GFGFVSFHTIQDAKAALQAMDGVELDGRPLRLSLA 288
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%)
Query: 55 PKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
P P + +++VGNL ++ T LT AF E G+V +++YD + RSRG+ FV
Sbjct: 96 PPRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVT 155
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+T E A++ NG L GR +RV+ +
Sbjct: 156 MATAEEAAKAVQMFNGALLGGRTVRVNFPE 185
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP 57
V+++R+TGRSRGF FV+ T++D A ++ +DG E GR LR++ + + P
Sbjct: 243 VIFERDTGRSRGFGFVSFHTIQDAKAALQAMDGVELDGRPLRLSLAAQNPP 293
>gi|3550485|emb|CAA11894.1| cp33Hv [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 97/155 (62%), Gaps = 13/155 (8%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK----- 56
+ + ++YD+ T RSRGFAFVTM+T E+ ++ +G GR +RVNF + P+
Sbjct: 134 VDDVQIIYDKITDRSRGFAFVTMATAEEAAKAVQMFNGALLGGRTVRVNFPEVPRGGERA 193
Query: 57 --------PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSR 108
L + + +K++ GNL W V ++L AF+ +VGARV+++ ++GRSR
Sbjct: 194 VASAAVARTSLRVVDDGTYKVYAGNLGWGVRADALKTAFEGQPGLVGARVIFERDTGRSR 253
Query: 109 GYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
G+GFV + T + + AL++++GVEL+GR +R+SLA
Sbjct: 254 GFGFVSFHTIQDAKAALQAMDGVELDGRPLRLSLA 288
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 55 PKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
P P + +++VGNL ++ T LT AF E G+V +++YD + RSRG+ FV
Sbjct: 96 PPRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVT 155
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLAQGRR 147
+T E A++ NG L GR +RV+ + R
Sbjct: 156 MATAEEAAKAVQMFNGALLGGRTVRVNFPEVPR 188
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP 57
V+++R+TGRSRGF FV+ T++D A ++ +DG E GR LR++ + + P
Sbjct: 243 VIFERDTGRSRGFGFVSFHTIQDAKAALQAMDGVELDGRPLRLSLAAQNPP 293
>gi|357112177|ref|XP_003557886.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like
[Brachypodium distachyon]
Length = 272
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 100/163 (61%), Gaps = 21/163 (12%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V+YD+ TGRSRGF FVTMSTVE+ +E L+G GR ++VN S P P+
Sbjct: 106 VEVIYDKLTGRSRGFGFVTMSTVEEVEEAVEQLNGYVLDGRTIKVN-SGPPPPRDQSSPR 164
Query: 65 T--------------------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
D +++VGNLSW+V +L F E G+V+GARV+YD ES
Sbjct: 165 GFREQSSGGFRQQSSRGPSGGDNRVYVGNLSWNVDDSALANLFNEQGSVLGARVIYDRES 224
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRR 147
GRSRG+GFV Y + E+E A+ +L+G +L+GR +RV++A+ R+
Sbjct: 225 GRSRGFGFVTYGSSEEVEKAVSNLDGTDLDGRQIRVTVAEARQ 267
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 52/76 (68%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D ++FVGNL +SV + L F++ G+V V+YD +GRSRG+GFV ST E+E A+
Sbjct: 76 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 135
Query: 126 ESLNGVELEGRAMRVS 141
E LNG L+GR ++V+
Sbjct: 136 EQLNGYVLDGRTIKVN 151
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDRE+GRSRGF FVT + E+ + NLDG + GR +RV ++ +P+
Sbjct: 218 VIYDRESGRSRGFGFVTYGSSEEVEKAVSNLDGTDLDGRQIRVTVAEARQPR 269
>gi|75275079|sp|P82277.1|RRP2_SPIOL RecName: Full=30S ribosomal protein 2, chloroplastic; AltName:
Full=Plastid-specific 30S ribosomal protein 2;
Short=PSRP-2; Flags: Precursor
gi|7578881|gb|AAF64167.1|AF240462_1 plastid-specific ribosomal protein 2 precursor [Spinacia oleracea]
Length = 260
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 95/146 (65%), Gaps = 9/146 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL----- 61
V+YD+ +GRSR F FVTM TVED NAVIE L+ E GR ++VN ++KP + +
Sbjct: 115 VMYDKYSGRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRKIKVNITEKPLEGMDIATTQA 174
Query: 62 ----YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
+ E+ +K+++GNL+ +VT E L F E G V+GA+V + +S G+GFV +S+
Sbjct: 175 EDSQFVESPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSS 234
Query: 118 KAEMETALESLNGVELEGRAMRVSLA 143
+ E+E A+++LN LEG+ +RV+ A
Sbjct: 235 EEEVEAAIQALNNSVLEGQKIRVNKA 260
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+VGN+ ++ + L +E+G + A V+YD SGRSR +GFV T + +E
Sbjct: 85 RLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEK 144
Query: 128 LNGVELEGRAMRVSLAQ 144
LN E+ GR ++V++ +
Sbjct: 145 LNDTEIGGRKIKVNITE 161
>gi|297816516|ref|XP_002876141.1| RNA-binding protein cp33 [Arabidopsis lyrata subsp. lyrata]
gi|297321979|gb|EFH52400.1| RNA-binding protein cp33 [Arabidopsis lyrata subsp. lyrata]
Length = 330
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 97/154 (62%), Gaps = 12/154 (7%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-------- 56
+ ++YD+ T RSRGF FVTM T+E+ I+ + + GR ++VN + P+
Sbjct: 146 VQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMFNSSQIGGRTVKVNLPEVPRGGEREVMR 205
Query: 57 ----PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
Y ++ K++ GNL W++T++ L AF + V+GA+V+Y+ +GRSRG+GF
Sbjct: 206 TKIRDNNRSYVDSPHKIYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGF 265
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ + + ++++AL ++NGVE+EGRA+R++LA R
Sbjct: 266 ISFESAEDVQSALATMNGVEVEGRALRLNLASER 299
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+VGNL +++T+ L+Q F E GNVV +++YD + RSRG+GFV T E + A++
Sbjct: 118 RLYVGNLPYTITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQM 177
Query: 128 LNGVELEGRAMRVSLAQGRR 147
N ++ GR ++V+L + R
Sbjct: 178 FNSSQIGGRTVKVNLPEVPR 197
>gi|414866997|tpg|DAA45554.1| TPA: ribonucleoprotein A [Zea mays]
Length = 262
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 93/154 (60%), Gaps = 19/154 (12%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN------------FS 52
+ V+YD+ TGRSRGF FVTMS+VE+ ++ +G GR LRVN
Sbjct: 110 VEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQFNGYVLDGRSLRVNSGPPPPRDRSSPSP 169
Query: 53 DKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
+P+ +++VGNLSW V +L F E G V+ AR++YD ESGRSRG+GF
Sbjct: 170 QRPRGDAN-------RVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGF 222
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
V Y + E+E A+ +L+G +L+GR +RV++A+ +
Sbjct: 223 VTYGSAEEVENAISNLDGADLDGRQIRVTVAESK 256
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D ++FVGNL +SV + L F++ G+V V+YD +GRSRG+GFV S+ E+E A+
Sbjct: 80 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAV 139
Query: 126 ESLNGVELEGRAMRVS 141
+ NG L+GR++RV+
Sbjct: 140 DQFNGYVLDGRSLRVN 155
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
++YDRE+GRSRGF FVT + E+ I NLDG + GR +RV ++ P+
Sbjct: 208 IIYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLDGRQIRVTVAESKPPR 259
>gi|226492142|ref|NP_001148607.1| ribonucleoprotein A precursor [Zea mays]
gi|195620768|gb|ACG32214.1| ribonucleoprotein A [Zea mays]
Length = 264
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 93/154 (60%), Gaps = 19/154 (12%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN------------FS 52
+ V+YD+ TGRSRGF FVTMS+VE+ ++ +G GR LRVN
Sbjct: 112 VEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQFNGYVLDGRSLRVNSGPPPPRDRSSPSP 171
Query: 53 DKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
+P+ +++VGNLSW V +L F E G V+ AR++YD ESGRSRG+GF
Sbjct: 172 QRPRGDAN-------RVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGF 224
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
V Y + E+E A+ +L+G +L+GR +RV++A+ +
Sbjct: 225 VTYGSAEEVENAISNLDGADLDGRQIRVTVAESK 258
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D ++FVGNL +SV + L F++ G+V V+YD +GRSRG+GFV S+ E+E A+
Sbjct: 82 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAV 141
Query: 126 ESLNGVELEGRAMRVS 141
+ NG L+GR++RV+
Sbjct: 142 DQFNGYVLDGRSLRVN 157
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
++YDRE+GRSRGF FVT + E+ I NLDG + GR +RV ++ P+
Sbjct: 210 IIYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLDGRQIRVTVAESKPPR 261
>gi|224106031|ref|XP_002314019.1| predicted protein [Populus trichocarpa]
gi|222850427|gb|EEE87974.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 96/151 (63%), Gaps = 9/151 (5%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+ K V+YD+ +GRSR FAFVTM T ED NA IE L+G E GR ++VN ++KP L L
Sbjct: 105 VEKAEVMYDKYSGRSRRFAFVTMKTAEDANAAIEKLNGTEIGGREIKVNITEKPLQSLDL 164
Query: 62 ---------YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
+ ++ +K++VGNL+ +V T++L F + GNV+ A+V + +S G+GF
Sbjct: 165 PSLQSDESQFVDSPYKVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGF 224
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLA 143
V +S++ ++E A+ S N LEG+ +RV+ A
Sbjct: 225 VTFSSEEDVEVAISSFNNSLLEGQPIRVNKA 255
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+VGN+ ++T E LT+ +E+G V A V+YD SGRSR + FV T + A+E
Sbjct: 80 RLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTAEDANAAIEK 139
Query: 128 LNGVELEGRAMRVSLAQ 144
LNG E+ GR ++V++ +
Sbjct: 140 LNGTEIGGREIKVNITE 156
>gi|242047468|ref|XP_002461480.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
gi|241924857|gb|EER98001.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
Length = 338
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 92/151 (60%), Gaps = 18/151 (11%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++YD+ T RSRGFAFVTM+T E+ I+ DG GR RVN+ P++P E
Sbjct: 141 IIYDKVTNRSRGFAFVTMATAEEAAKAIQMFDGALLGGRTARVNY-----PEVPRGGERR 195
Query: 66 ------------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
+K++ GNL W V ++L F+ ++ ARV+++ E+GRSRG+GFV
Sbjct: 196 TVTMAGRRRDDGTYKIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFV 255
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+ T + + ALE+L+GVELEGR +R+SLA+
Sbjct: 256 SFRTAEDAQAALEALDGVELEGRPLRLSLAE 286
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%)
Query: 55 PKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
P P + +LFVGNL ++ T+E L Q F E G V A+++YD + RSRG+ FV
Sbjct: 98 PPRSRPTRGDDPGRLFVGNLPYTYTSEELAQVFAEAGRVDDAQIIYDKVTNRSRGFAFVT 157
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+T E A++ +G L GR RV+ +
Sbjct: 158 MATAEEAAKAIQMFDGALLGGRTARVNYPE 187
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
V+++RETGRSRGF FV+ T ED A +E LDG E GR LR++ +++
Sbjct: 240 VIFERETGRSRGFGFVSFRTAEDAQAALEALDGVELEGRPLRLSLAEQ 287
>gi|118489133|gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 255
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 96/151 (63%), Gaps = 9/151 (5%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+ K V+YD+ +GRSR FAFVTM T ED NA IE L+G E GR ++VN ++KP L L
Sbjct: 105 VEKAEVMYDKYSGRSRRFAFVTMKTAEDANAAIEKLNGTEIGGREIKVNITEKPLQSLDL 164
Query: 62 ---------YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
+ ++ +K++VGNL+ +V T++L F + GNV+ A+V + +S G+GF
Sbjct: 165 PSLQSDETQFVDSPYKVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGF 224
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLA 143
V +S++ ++E A+ S N LEG+ +RV+ A
Sbjct: 225 VTFSSEEDVEVAISSFNNSLLEGQPIRVNKA 255
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+VGN+ ++T E LT+ +E+G V A V+YD SGRSR + FV T + A+E
Sbjct: 80 RLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTAEDANAAIEK 139
Query: 128 LNGVELEGRAMRVSLAQ 144
LNG E+ GR ++V++ +
Sbjct: 140 LNGTEIGGREIKVNITE 156
>gi|388518645|gb|AFK47384.1| unknown [Lotus japonicus]
Length = 307
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 91/151 (60%), Gaps = 12/151 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
V+Y++ T +SRGF FV MST ED + G E GR+L VN + PK P
Sbjct: 151 VIYNKATNQSRGFGFVIMSTAEDLEKALNKFSGYELDGRVLTVNKA-TPKEARPERPPRT 209
Query: 67 FK-----------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
F ++VGNL WSV L + F+E+GNV AR++ D E+GRSRG+GFV
Sbjct: 210 FGSGSGSRDSGLSVYVGNLPWSVDAARLEEIFREHGNVENARIVMDRETGRSRGFGFVTM 269
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQGR 146
S++A++ A+ +L+G L+GR +RVS+A+GR
Sbjct: 270 SSEADINGAIAALDGQSLDGRTIRVSVAEGR 300
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 54/83 (65%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D K+FVGNL W V +E+L F+E G+V A V+Y+ + +SRG+GFV ST ++E AL
Sbjct: 119 DLKIFVGNLPWDVESENLAMLFEEAGSVEFAEVIYNKATNQSRGFGFVIMSTAEDLEKAL 178
Query: 126 ESLNGVELEGRAMRVSLAQGRRS 148
+G EL+GR + V+ A + +
Sbjct: 179 NKFSGYELDGRVLTVNKATPKEA 201
>gi|681912|dbj|BAA06523.1| RNA-binding protein cp33 [Arabidopsis thaliana]
Length = 321
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 97/154 (62%), Gaps = 12/154 (7%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-------- 56
+ ++YD+ T RSRGF FVTM ++E+ ++ + + GR ++VNF + P+
Sbjct: 137 VQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMR 196
Query: 57 ----PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
Y ++ K++ GNL W++T++ L AF + V+GA+V+Y+ +GRSRG+GF
Sbjct: 197 TKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGF 256
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ + + +++AL ++NGVE+EGRA+R++LA R
Sbjct: 257 ISFESAENVQSALATMNGVEVEGRALRLNLASER 290
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 53/82 (64%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+++L+VGNL +++T+ L+Q F E G VV +++YD + RSRG+GFV + E + A+
Sbjct: 107 EWRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAM 166
Query: 126 ESLNGVELEGRAMRVSLAQGRR 147
+ N ++ GR ++V+ + R
Sbjct: 167 QMFNSSQIGGRTVKVNFPEVPR 188
>gi|17064758|gb|AAL32533.1| ubiquitin / ribosomal protein CEP52 [Arabidopsis thaliana]
Length = 329
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 96/154 (62%), Gaps = 12/154 (7%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-------- 56
+ ++YD+ T RSRGF FVTM ++E+ ++ + + GR ++VNF + P+
Sbjct: 145 VQIVYDKVTDRSRGFGFVTMGSIEEAKGAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMR 204
Query: 57 ----PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
Y ++ K++ GNL W +T++ L AF + V+GA+V+Y+ +GRSRG+GF
Sbjct: 205 TKIRDNNRSYVDSPHKVYAGNLGWDLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGF 264
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ + + +++AL ++NGVE+EGRA+R++LA R
Sbjct: 265 ISFESAENVQSALATMNGVEVEGRALRLNLASER 298
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+VGNL +++T+ L+Q F E G VV +++YD + RSRG+GFV + E + A++
Sbjct: 117 RLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKGAMQM 176
Query: 128 LNGVELEGRAMRVSLAQGRR 147
N ++ GR ++V+ + R
Sbjct: 177 FNSSQIGGRTVKVNFPEVPR 196
>gi|15231200|ref|NP_190806.1| chloroplast RNA-binding protein 33 [Arabidopsis thaliana]
gi|681910|dbj|BAA06522.1| RNA-binding protein cp33 [Arabidopsis thaliana]
gi|4886289|emb|CAB43448.1| RNA-binding protein cp33 precursor [Arabidopsis thaliana]
gi|14517544|gb|AAK62662.1| AT3g52380/F22O6_240 [Arabidopsis thaliana]
gi|18700226|gb|AAL77723.1| AT3g52380/F22O6_240 [Arabidopsis thaliana]
gi|21553418|gb|AAM62511.1| RNA-binding protein cp33 [Arabidopsis thaliana]
gi|332645419|gb|AEE78940.1| chloroplast RNA-binding protein 33 [Arabidopsis thaliana]
Length = 329
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 97/154 (62%), Gaps = 12/154 (7%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-------- 56
+ ++YD+ T RSRGF FVTM ++E+ ++ + + GR ++VNF + P+
Sbjct: 145 VQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMR 204
Query: 57 ----PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
Y ++ K++ GNL W++T++ L AF + V+GA+V+Y+ +GRSRG+GF
Sbjct: 205 TKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGF 264
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ + + +++AL ++NGVE+EGRA+R++LA R
Sbjct: 265 ISFESAENVQSALATMNGVEVEGRALRLNLASER 298
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+VGNL +++T+ L+Q F E G VV +++YD + RSRG+GFV + E + A++
Sbjct: 117 RLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQM 176
Query: 128 LNGVELEGRAMRVSLAQGRR 147
N ++ GR ++V+ + R
Sbjct: 177 FNSSQIGGRTVKVNFPEVPR 196
>gi|302822192|ref|XP_002992755.1| hypothetical protein SELMODRAFT_4991 [Selaginella moellendorffii]
gi|300139400|gb|EFJ06141.1| hypothetical protein SELMODRAFT_4991 [Selaginella moellendorffii]
Length = 177
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 93/141 (65%), Gaps = 4/141 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD---KPKPKLPL-Y 62
V+ DRETGRSRGF +VT+++++ ++ LDG GR L+ +FS K + P+
Sbjct: 33 VVCDRETGRSRGFGYVTLTSIDFAQVAVQKLDGHIVQGRALKASFSQPYKKAGKEGPVEV 92
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A + K+F+GNL W V SL + F+ +G VV A+++YD ++GRSRG+GFV S+ E +
Sbjct: 93 AASHTKVFIGNLPWGVDDGSLEEFFRAHGKVVEAKIVYDRDTGRSRGFGFVTLSSPKEAD 152
Query: 123 TALESLNGVELEGRAMRVSLA 143
A++SL+G + +GR +RV LA
Sbjct: 153 EAVKSLDGADCDGRRLRVKLA 173
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGAR-VLYDGESGRSRGYGFVCYSTKAEMETALE 126
+++VGNLSW+ +E L + Q+ G + V+ D E+GRSRG+G+V ++ + A++
Sbjct: 2 RIYVGNLSWNCDSEELAKVLQQAGILAHVEEVVCDRETGRSRGFGYVTLTSIDFAQVAVQ 61
Query: 127 SLNGVELEGRAMRVSLAQ 144
L+G ++GRA++ S +Q
Sbjct: 62 KLDGHIVQGRALKASFSQ 79
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
++YDR+TGRSRGF FVT+S+ ++ + +++LDG + GR LRV +D
Sbjct: 128 IVYDRDTGRSRGFGFVTLSSPKEADEAVKSLDGADCDGRRLRVKLAD 174
>gi|449436259|ref|XP_004135910.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cucumis
sativus]
gi|449489082|ref|XP_004158209.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cucumis
sativus]
Length = 251
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 96/152 (63%), Gaps = 10/152 (6%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP------ 55
+ K V+YD+ +GRSR FAFVTM TVED NA IE L+ E GR ++VN ++KP
Sbjct: 100 VEKAEVMYDKYSGRSRRFAFVTMKTVEDANAAIEKLNETEVGGRKIKVNITEKPVVNTVD 159
Query: 56 ----KPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
+ + + ++ +K++VGN+S +V+TE+L F E G V+ A+V + +S GYG
Sbjct: 160 MSFLQAEESQFIDSPYKVYVGNISSTVSTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYG 219
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
FV +S++ E++ A+ S N LEG+ +RV+ A
Sbjct: 220 FVTFSSEEEVDAAISSFNNALLEGQPIRVNKA 251
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL++GN+ +V E LT+ QE+G V A V+YD SGRSR + FV T + A+E
Sbjct: 75 KLYIGNIPRNVNNEELTRIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDANAAIEK 134
Query: 128 LNGVELEGRAMRVSLAQ 144
LN E+ GR ++V++ +
Sbjct: 135 LNETEVGGRKIKVNITE 151
>gi|356557128|ref|XP_003546870.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Glycine
max]
Length = 246
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 9/151 (5%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+ K V+YD+ +GRSR FAFVTM TVED AVIE L+G E GR ++VN ++KP L L
Sbjct: 96 VEKAEVMYDKYSGRSRRFAFVTMKTVEDATAVIEKLNGTELGGREIKVNVTEKPLSTLDL 155
Query: 62 ---------YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
+ ++ K++VGNL+ +VTT++L F E G V+ A+V + +S GYGF
Sbjct: 156 PLLQAEESEFIDSPHKVYVGNLAKTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGF 215
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLA 143
V + ++ ++E A+ S N LEG+ +RV+ A
Sbjct: 216 VTFPSEEDVEAAISSFNNSLLEGQTIRVNKA 246
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+VGN+ +VT + L + QE+G V A V+YD SGRSR + FV T + +E
Sbjct: 71 RLYVGNIPRTVTNDELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDATAVIEK 130
Query: 128 LNGVELEGRAMRVSLAQ 144
LNG EL GR ++V++ +
Sbjct: 131 LNGTELGGREIKVNVTE 147
>gi|357157795|ref|XP_003577917.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like
[Brachypodium distachyon]
Length = 244
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 96/146 (65%), Gaps = 10/146 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK---------PKP 57
V+YD+ +GRSR F FVTMS+VE+ NA IE+L+ E GR ++VN ++ P+P
Sbjct: 100 VMYDKYSGRSRRFGFVTMSSVEEANAAIESLNETEVGGRKIKVNVTESFLPNIDPSAPEP 159
Query: 58 KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
+ P + ++ +K++VGNL+ +VTTE L F E G V+ A V + +S+GYGFV +S+
Sbjct: 160 E-PAFVDSQYKVYVGNLAKTVTTEVLKNFFSEKGEVLSATVSRIPGTPKSKGYGFVTFSS 218
Query: 118 KAEMETALESLNGVELEGRAMRVSLA 143
+ E+E A+ + N ELEG+ +RV+ A
Sbjct: 219 EEEVEAAVSTFNNTELEGQPIRVNRA 244
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGN+ +VT + L F ++G V+ A V+YD SGRSR +GFV S+ E A+ES
Sbjct: 70 KLYVGNIPRTVTNDELRAMFADHGTVLRADVMYDKYSGRSRRFGFVTMSSVEEANAAIES 129
Query: 128 LNGVELEGRAMRVSLAQ 144
LN E+ GR ++V++ +
Sbjct: 130 LNETEVGGRKIKVNVTE 146
>gi|115478330|ref|NP_001062760.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|49387841|dbj|BAD26506.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|49388840|dbj|BAD26030.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|113630993|dbj|BAF24674.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|215695254|dbj|BAG90445.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737768|dbj|BAG96898.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641205|gb|EEE69337.1| hypothetical protein OsJ_28655 [Oryza sativa Japonica Group]
Length = 245
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 98/151 (64%), Gaps = 10/151 (6%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK------- 54
+ + V++D+ TGRSR F FVTMST E+ NA IE+L+ E GR ++VN ++
Sbjct: 96 VERAEVMFDKYTGRSRRFGFVTMSTPEEANAAIESLNETEVGGRKIKVNVTESFLPNIDR 155
Query: 55 --PKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
P+P+ P++ ++ +K++VGNL+ SVTTE L F E G V+ A V + +S+GYGF
Sbjct: 156 SAPEPE-PVFVDSQYKVYVGNLAKSVTTEMLKNFFSEKGEVLSATVSRIPGTAKSKGYGF 214
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLA 143
V +S++ E++ A+ + N ELEG+ +RV+ A
Sbjct: 215 VTFSSEEEVQAAVSTFNNAELEGQPIRVNKA 245
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGN+ +VT + L F ++G V A V++D +GRSR +GFV ST E A+ES
Sbjct: 71 KLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEANAAIES 130
Query: 128 LNGVELEGRAMRVSLAQ 144
LN E+ GR ++V++ +
Sbjct: 131 LNETEVGGRKIKVNVTE 147
>gi|357457543|ref|XP_003599052.1| 30S ribosomal protein [Medicago truncatula]
gi|355488100|gb|AES69303.1| 30S ribosomal protein [Medicago truncatula]
Length = 235
Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 96/150 (64%), Gaps = 8/150 (5%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP--KPKL 59
+ K V+YD+ + RSR FAFVTM TVED NA E L+G E GR ++VN ++KP L
Sbjct: 86 VEKAEVMYDKYSKRSRRFAFVTMKTVEDANAAAEKLNGTEIGGREIKVNITEKPLTTEGL 145
Query: 60 PLYA------ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
P+ A ++ +K++VGNL+ +VT++SL + F E GN + A+V + +S G+GFV
Sbjct: 146 PVQAGESTFVDSPYKVYVGNLAKNVTSDSLKKFFSEKGNALSAKVSRAPGTSKSSGFGFV 205
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSLA 143
+S+ ++E A+ S N LEG+ +RV+ A
Sbjct: 206 TFSSDEDVEAAISSFNNALLEGQKIRVNKA 235
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGN+ +V+ + L + QE+G V A V+YD S RSR + FV T + A E
Sbjct: 61 KLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFVTMKTVEDANAAAEK 120
Query: 128 LNGVELEGRAMRVSLAQ 144
LNG E+ GR ++V++ +
Sbjct: 121 LNGTEIGGREIKVNITE 137
>gi|357111564|ref|XP_003557582.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 354
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 96/155 (61%), Gaps = 13/155 (8%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP------ 55
+ + ++YD+ T RSRGFAFVTM+T E+ ++ +G GR +RVNF + P
Sbjct: 147 VDDVQIIYDKITDRSRGFAFVTMATAEEAAKAVQMFNGALLGGRTIRVNFPEVPRGGERA 206
Query: 56 -------KPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSR 108
K L + + +K++ GNL W V ++L AF+ ++G+RV+++ ++GRSR
Sbjct: 207 VASAAAAKTSLRVVDDGTYKVYAGNLGWGVRADALKTAFEGQPGLLGSRVIFERDTGRSR 266
Query: 109 GYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
G+GFV + T + A+++++GVEL+GR +R+SLA
Sbjct: 267 GFGFVSFQTLEDANAAIQAMDGVELDGRPLRLSLA 301
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%)
Query: 55 PKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
P P + +++VGNL ++ T LT F E G+V +++YD + RSRG+ FV
Sbjct: 109 PPRTRPALGQEPGRIYVGNLPYTFTAAELTSVFSEAGSVDDVQIIYDKITDRSRGFAFVT 168
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+T E A++ NG L GR +RV+ +
Sbjct: 169 MATAEEAAKAVQMFNGALLGGRTIRVNFPE 198
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP 57
V+++R+TGRSRGF FV+ T+ED NA I+ +DG E GR LR++ + + P
Sbjct: 256 VIFERDTGRSRGFGFVSFQTLEDANAAIQAMDGVELDGRPLRLSLASQNPP 306
>gi|388508598|gb|AFK42365.1| unknown [Medicago truncatula]
Length = 235
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 95/148 (64%), Gaps = 8/148 (5%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP--KPKL 59
+ K V+YD+ + RSR FAFVTM TVED NA E L+G E GR ++VN ++KP L
Sbjct: 86 VEKAEVMYDKYSKRSRRFAFVTMKTVEDANAAAEKLNGTEIGGREIKVNITEKPLTTEGL 145
Query: 60 PLYA------ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
P+ A ++ +K++VGNL+ +VT++SL + F E GN + A+V + +S G+GFV
Sbjct: 146 PVQAGESTFVDSPYKVYVGNLAKNVTSDSLKKFFSEKGNALSAKVSRAPGTSKSSGFGFV 205
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVS 141
+S+ ++E A+ S N LEG+ +RV+
Sbjct: 206 TFSSDEDVEAAISSFNNALLEGQKIRVN 233
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGN+ +V+ + L + QE+G V A V+YD S RSR + FV T + A E
Sbjct: 61 KLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFVTMKTVEDANAAAEK 120
Query: 128 LNGVELEGRAMRVSLAQ 144
LNG E+ GR ++V++ +
Sbjct: 121 LNGTEIGGREIKVNITE 137
>gi|225450219|ref|XP_002265629.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Vitis vinifera]
gi|297736206|emb|CBI24844.3| unnamed protein product [Vitis vinifera]
Length = 247
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 98/152 (64%), Gaps = 10/152 (6%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+ K V+YD+ +GRSR FAFVTM TVED NA IE L+G E GR ++VN ++KP L +
Sbjct: 96 VEKAEVMYDKYSGRSRRFAFVTMKTVEDANAAIEKLNGTEIGGREIKVNITEKPLLTLDM 155
Query: 62 ---------YAETDFKLFVGNLSWSVTTESLTQAFQEY-GNVVGARVLYDGESGRSRGYG 111
+ ++ K++VGNL+ +VTT++LTQ F E G V+ A+V + +S G+G
Sbjct: 156 SLLQAEESQFIDSPHKVYVGNLARTVTTDTLTQFFSEKGGKVLSAKVSRVPGTSKSSGFG 215
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
FV +S++ ++E A+ S N L+G+ +RV+ A
Sbjct: 216 FVSFSSEEDVEAAISSCNNAFLDGQRIRVNKA 247
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 13/102 (12%)
Query: 56 KPKLPL----------YAETDF---KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDG 102
KPK P+ A +D +L+VGN+ ++ + L + +E+G V A V+YD
Sbjct: 46 KPKRPIAVSAVTAEAPVATSDVAARRLYVGNIPRTLDSAELARIVEEHGAVEKAEVMYDK 105
Query: 103 ESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
SGRSR + FV T + A+E LNG E+ GR ++V++ +
Sbjct: 106 YSGRSRRFAFVTMKTVEDANAAIEKLNGTEIGGREIKVNITE 147
>gi|224138144|ref|XP_002326529.1| predicted protein [Populus trichocarpa]
gi|222833851|gb|EEE72328.1| predicted protein [Populus trichocarpa]
Length = 294
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 89/149 (59%), Gaps = 10/149 (6%)
Query: 8 LYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK----PKPKLP--- 60
+ ++ GRSRGFAFVTM+T E+ A I+ + E GRI+RV F+ + P P+LP
Sbjct: 125 IIKQKNGRSRGFAFVTMTTGEEAQAAIDKFNSLEVSGRIIRVEFAKRLRRPPSPRLPGTP 184
Query: 61 ---LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
ET KL++ NL+W V L + F N V +RV++DG +GRS GYGFV ++T
Sbjct: 185 ADIPAGETRHKLYISNLAWKVRGSHLREFFSTNCNPVSSRVVFDGPAGRSSGYGFVSFAT 244
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQGR 146
+ E A+ + +G EL GR +R+ ++ +
Sbjct: 245 REEAVAAISAFSGKELMGRPIRLKFSEDK 273
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFV NL WS + + F + G V ++ ++GRSRG+ FV +T E + A++
Sbjct: 95 KLFVVNLPWSFSVVDIKDLFGQCGTVSDVEIIKQ-KNGRSRGFAFVTMTTGEEAQAAIDK 153
Query: 128 LNGVELEGRAMRVSLAQGRR 147
N +E+ GR +RV A+ R
Sbjct: 154 FNSLEVSGRIIRVEFAKRLR 173
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V++D GRS G+ FV+ +T E+ A I G+E +GR +R+ FS+
Sbjct: 225 VVFDGPAGRSSGYGFVSFATREEAVAAISAFSGKELMGRPIRLKFSE 271
>gi|118489861|gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 294
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 89/149 (59%), Gaps = 10/149 (6%)
Query: 8 LYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK----PKPKLP--- 60
+ ++ GRSRGFAFVTM+T E+ A I+ + E GRI+RV F+ + P P+LP
Sbjct: 125 IIKQKNGRSRGFAFVTMTTGEEAQAAIDKFNSLEVSGRIIRVEFAKRLRRPPSPRLPGTP 184
Query: 61 ---LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
ET KL++ NL+W V L + F N V +RV++DG +GRS GYGFV ++T
Sbjct: 185 ADIPAGETRHKLYISNLAWKVRGSHLREFFSTNCNPVSSRVVFDGPAGRSSGYGFVSFAT 244
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQGR 146
+ E A+ + +G EL GR +R+ ++ +
Sbjct: 245 REEAVAAISAFSGKELMGRPIRLKFSEDK 273
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFV NL WS + + F + G V ++ ++GRSRG+ FV +T E + A++
Sbjct: 95 KLFVVNLPWSFSVVDIKDLFGQCGTVSDVEIIKQ-KNGRSRGFAFVTMTTGEEAQAAIDK 153
Query: 128 LNGVELEGRAMRVSLAQGRR 147
N +E+ GR +RV A+ R
Sbjct: 154 FNSLEVSGRIIRVEFAKRLR 173
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V++D GRS G+ FV+ +T E+ A I G+E +GR +R+ FS+
Sbjct: 225 VVFDGPAGRSSGYGFVSFATREEAVAAISAFSGKELMGRPIRLKFSE 271
>gi|255544262|ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223547691|gb|EEF49184.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 256
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 94/151 (62%), Gaps = 9/151 (5%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+ K V+YD+ +GRSR FAFVTM TVED NAVIE L+G + GR ++VN ++KP L
Sbjct: 106 VEKAEVMYDKYSGRSRRFAFVTMRTVEDANAVIEKLNGTQIGGREIKVNITEKPLASGDL 165
Query: 62 ---------YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
+ ++ K++VGNL+ +VT+E L F E G V+ A+V + +S GYGF
Sbjct: 166 SFLQLEESQFVDSPHKVYVGNLAKTVTSEILKNFFSEKGKVLSAKVSRVPGTSKSSGYGF 225
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLA 143
V +S + ++E A+ S N LEG+ +RV+ A
Sbjct: 226 VSFSEEEDVEAAISSFNNSLLEGQKIRVNKA 256
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 50/82 (60%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
+E +L++GN+ +V + LT+ +E+G V A V+YD SGRSR + FV T +
Sbjct: 76 SEAAKRLYIGNIPRTVDNDELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMRTVEDAN 135
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
+E LNG ++ GR ++V++ +
Sbjct: 136 AVIEKLNGTQIGGREIKVNITE 157
>gi|302758260|ref|XP_002962553.1| hypothetical protein SELMODRAFT_26412 [Selaginella moellendorffii]
gi|300169414|gb|EFJ36016.1| hypothetical protein SELMODRAFT_26412 [Selaginella moellendorffii]
Length = 177
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 92/141 (65%), Gaps = 4/141 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD---KPKPKLPL-Y 62
V+ DRETGRSRGF +VT+++++ ++ LDG GR L+ ++S K + P+
Sbjct: 33 VVCDRETGRSRGFGYVTLTSIDFAQVAVQKLDGHIVQGRALKASYSQPYKKAGKEGPVEV 92
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A + K+F+GNL W V SL + F+ +G VV +++YD ++GRSRG+GFV S+ E +
Sbjct: 93 AASHTKVFIGNLPWGVDDGSLEEFFRAHGKVVEVKIVYDRDTGRSRGFGFVTLSSPKEAD 152
Query: 123 TALESLNGVELEGRAMRVSLA 143
A++SL+G + +GR +RV LA
Sbjct: 153 EAVKSLDGADCDGRRLRVKLA 173
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGAR-VLYDGESGRSRGYGFVCYSTKAEMETALE 126
+++VGNLSW+ +E L + Q+ G + V+ D E+GRSRG+G+V ++ + A++
Sbjct: 2 RIYVGNLSWNCDSEELAKVLQQAGILAHVEEVVCDRETGRSRGFGYVTLTSIDFAQVAVQ 61
Query: 127 SLNGVELEGRAMRVSLAQ 144
L+G ++GRA++ S +Q
Sbjct: 62 KLDGHIVQGRALKASYSQ 79
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 38/50 (76%)
Query: 4 KLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
++ ++YDR+TGRSRGF FVT+S+ ++ + +++LDG + GR LRV +D
Sbjct: 125 EVKIVYDRDTGRSRGFGFVTLSSPKEADEAVKSLDGADCDGRRLRVKLAD 174
>gi|1054915|gb|AAA81023.1| CEBP-1 [Dianthus caryophyllus]
Length = 292
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 92/146 (63%), Gaps = 7/146 (4%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
V+Y+RET RSRGF FVTMSTVE+ + +E E GR+L VN + P+ P A +
Sbjct: 143 VIYNRETDRSRGFGFVTMSTVEEADKAVEMFHSYELNGRLLTVNKA-APRGSRPEKAPRE 201
Query: 67 F-----KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
F + +VGNL W V + L Q E+G V+ ARV+ D E+ RSRG+GFV +++ EM
Sbjct: 202 FCPLLSESYVGNLPWDVDNDRLEQLSSEHGKVLSARVVSDRETERSRGFGFVTMASETEM 261
Query: 122 ETA-LESLNGVELEGRAMRVSLAQGR 146
A L +L+G LEGR +RV++A+ R
Sbjct: 262 NDATLGALDGESLEGRPIRVNVAEER 287
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 31 NAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET-------DFKLFVGNLSWSVTTESL 83
NAVI+ + E + + +P+P +E D KL+VGNL + V +E L
Sbjct: 69 NAVIDEEENVEKTEAAVNWEDASEPQPSSGFGSEDGFSEPSEDVKLYVGNLPFDVDSEKL 128
Query: 84 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
F G V A V+Y+ E+ RSRG+GFV ST E + A+E + EL GR + V+ A
Sbjct: 129 ANMFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVEMFHSYELNGRLLTVNKA 188
Query: 144 QGRRS 148
R S
Sbjct: 189 APRGS 193
>gi|30693595|ref|NP_566958.3| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|79314769|ref|NP_001030841.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|17979394|gb|AAL49922.1| unknown protein [Arabidopsis thaliana]
gi|22136722|gb|AAM91680.1| unknown protein [Arabidopsis thaliana]
gi|332645382|gb|AEE78903.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332645383|gb|AEE78904.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 253
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 96/152 (63%), Gaps = 10/152 (6%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP---KPK 58
+ K+ V+YD+ +GRSR F F TM +VED NAV+E L+G GR ++VN ++KP P
Sbjct: 102 VEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKPIASSPD 161
Query: 59 LPL-------YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
L + + ++ +K++VGNL+ +VT E L F E G VV A+V + +S G+G
Sbjct: 162 LSVLQSEDSAFVDSPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFG 221
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
FV +S++ ++E A+ +LN LEG+ +RV+ A
Sbjct: 222 FVTFSSEEDVEAAIVALNNSLLEGQKIRVNKA 253
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
++++GN+ +VT E LT+ +E+G V +V+YD SGRSR +GF + + +E
Sbjct: 77 RVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEK 136
Query: 128 LNGVELEGRAMRVSLAQ 144
LNG +EGR ++V++ +
Sbjct: 137 LNGNTVEGREIKVNITE 153
>gi|224091455|ref|XP_002309257.1| predicted protein [Populus trichocarpa]
gi|222855233|gb|EEE92780.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 98/154 (63%), Gaps = 13/154 (8%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK--------PK 58
V+YDR T RSRGF FVTM +VE+ I+ +G ++ GR +RVNF + P+ P+
Sbjct: 144 VIYDRVTDRSRGFGFVTMGSVEEAKKAIQMFNGTQFGGRSVRVNFPEVPRGGEREVMGPR 203
Query: 59 LPL----YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
+ + +++ K++ GNL W +T+E L AF V+ A+V+Y+ +S RSRG+GFV
Sbjct: 204 IQSGYKGFIDSEHKIYAGNLGWRLTSEGLRDAFANQPGVLSAKVIYERDSRRSRGFGFVS 263
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+ + E ALE++NG E+EGR MR++LA G RS
Sbjct: 264 FESAENAEAALEAMNGEEVEGRPMRLNLA-GERS 296
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGNL +S+T+ LT+ F+E G V A V+YD + RSRG+GFV + E + A++
Sbjct: 114 KLYVGNLPYSMTSSELTEVFEEAGRVFSAEVIYDRVTDRSRGFGFVTMGSVEEAKKAIQM 173
Query: 128 LNGVELEGRAMRVSLAQGRR 147
NG + GR++RV+ + R
Sbjct: 174 FNGTQFGGRSVRVNFPEVPR 193
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP 57
V+Y+R++ RSRGF FV+ + E+ A +E ++G E GR +R+N + + P
Sbjct: 247 VIYERDSRRSRGFGFVSFESAENAEAALEAMNGEEVEGRPMRLNLAGERSP 297
>gi|222423445|dbj|BAH19693.1| AT3G52150 [Arabidopsis thaliana]
Length = 253
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 96/152 (63%), Gaps = 10/152 (6%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP---KPK 58
+ K+ V+YD+ +GRSR F F TM +VED NAV+E L+G GR ++VN ++KP P
Sbjct: 102 VEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKPIASSPD 161
Query: 59 LPL-------YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
L + + ++ +K++VGNL+ +VT E L F E G VV A+V + +S G+G
Sbjct: 162 LSVLQSEDSAFVDSPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFG 221
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
FV +S++ ++E A+ +LN LEG+ +RV+ A
Sbjct: 222 FVTFSSEEDVEAAVVALNNSLLEGQKIRVNKA 253
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
++++GN+ +V+ E LT+ +E+G V +V+YD SGRSR +GF + + +E
Sbjct: 77 RVYIGNIPRTVSNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEK 136
Query: 128 LNGVELEGRAMRVSLAQ 144
LNG +EGR ++V++ +
Sbjct: 137 LNGNTVEGREIKVNITE 153
>gi|217073784|gb|ACJ85252.1| unknown [Medicago truncatula]
Length = 280
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 96/163 (58%), Gaps = 21/163 (12%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL----- 59
+ V+YD+ TGRSRGF FVTMS+ + A + L+G GR LRVN P P+
Sbjct: 113 VEVIYDKSTGRSRGFGFVTMSSAAEVEAAAQQLNGYVVDGRELRVNAGPPPPPRSENSRF 172
Query: 60 ---PLY-------------AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE 103
P + ++ D ++ VGNL+W V +L F E G V+ A+V+YD E
Sbjct: 173 GENPRFGGDRPRGPPRGGSSDGDNRVHVGNLAWGVDNLALESLFGEQGQVLEAKVIYDRE 232
Query: 104 SGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
SGRSRG+GFV +S+ E+++A+ +L+G +L GRA+RVS A R
Sbjct: 233 SGRSRGFGFVTFSSADEVDSAIRTLDGADLNGRAIRVSPADSR 275
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
P Y+ +LFVG+L +SV + L + F+ G+V V+YD +GRSRG+GFV S+ A
Sbjct: 78 PSYSPNQ-RLFVGSLPFSVDSAQLAEIFENAGDVEMVEVIYDKSTGRSRGFGFVTMSSAA 136
Query: 120 EMETALESLNGVELEGRAMRVS 141
E+E A + LNG ++GR +RV+
Sbjct: 137 EVEAAAQQLNGYVVDGRELRVN 158
>gi|357440407|ref|XP_003590481.1| 30 kDa ribonucleoprotein [Medicago truncatula]
gi|355479529|gb|AES60732.1| 30 kDa ribonucleoprotein [Medicago truncatula]
gi|388503166|gb|AFK39649.1| unknown [Medicago truncatula]
Length = 280
Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 96/163 (58%), Gaps = 21/163 (12%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL----- 59
+ V+YD+ TGRSRGF FVTMS+ + A + L+G GR LRVN P P+
Sbjct: 113 VEVIYDKSTGRSRGFGFVTMSSAAEVEAAAQQLNGYVVDGRELRVNAGPPPPPRSENSRF 172
Query: 60 ---PLY-------------AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE 103
P + ++ D ++ VGNL+W V +L F E G V+ A+V+YD E
Sbjct: 173 GENPRFGGDRPRGPPRGGSSDGDNRVHVGNLAWGVDNLALESLFGEQGQVLEAKVIYDRE 232
Query: 104 SGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
SGRSRG+GFV +S+ E+++A+ +L+G +L GRA+RVS A R
Sbjct: 233 SGRSRGFGFVTFSSADEVDSAIRTLDGADLNGRAIRVSPADSR 275
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
P Y+ +LFVGNL +SV + L + F+ G+V V+YD +GRSRG+GFV S+ A
Sbjct: 78 PSYSPNQ-RLFVGNLPFSVDSAQLAEIFENAGDVEMVEVIYDKSTGRSRGFGFVTMSSAA 136
Query: 120 EMETALESLNGVELEGRAMRVS 141
E+E A + LNG ++GR +RV+
Sbjct: 137 EVEAAAQQLNGYVVDGRELRVN 158
>gi|449515273|ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 288
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 91/143 (63%), Gaps = 6/143 (4%)
Query: 8 LYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK------PKPKLPL 61
+ ++ GRSRGFAFVTM++ ++ A I+ D +E GR+++V F+ + PKP P
Sbjct: 125 IIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPGPP 184
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
ET KL+V NL+W V + +L F E N + ARV++D +GRS GYGFV ++T+ E
Sbjct: 185 PGETVNKLYVSNLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEA 244
Query: 122 ETALESLNGVELEGRAMRVSLAQ 144
+TAL SL G EL GR +R+ ++
Sbjct: 245 QTALSSLEGKELMGRPLRLKFSE 267
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL++ NL WS++ + + F + G V ++ ++GRSRG+ FV ++ E + A++
Sbjct: 95 KLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQ-KNGRSRGFAFVTMASPDEAQAAIQK 153
Query: 128 LNGVELEGRAMRVSLAQ 144
+ E+ GR ++V A+
Sbjct: 154 FDSQEISGRVIKVEFAK 170
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
V++D GRS G+ FV+ +T E+ + +L+G+E +GR LR+ FS++
Sbjct: 221 VVFDSPAGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRLKFSER 268
>gi|326523691|dbj|BAJ93016.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 91/145 (62%), Gaps = 8/145 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL------- 59
V+YD+ +GRSR F FVTMST E+ A IE+L+ E GR ++VN ++ P +
Sbjct: 100 VMYDKYSGRSRRFGFVTMSTAEEVAAAIESLNDTEVGGRKIKVNVTESFLPNIDASAPES 159
Query: 60 -PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
P + ++ +K++VGNL+ VTTE L F E G V+ A V + +S+GYGFV +S++
Sbjct: 160 EPSFVDSQYKVYVGNLAKKVTTEVLKNFFSEKGEVLSATVSRIPGTPKSKGYGFVTFSSE 219
Query: 119 AEMETALESLNGVELEGRAMRVSLA 143
E+E A+ + N ELEG+ +RV+ A
Sbjct: 220 EEVEAAVSTFNNTELEGQTIRVNRA 244
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGN+ +VT + L+ F +G VV A V+YD SGRSR +GFV ST E+ A+ES
Sbjct: 70 KLYVGNIPRTVTNDELSAMFAAHGTVVRAEVMYDKYSGRSRRFGFVTMSTAEEVAAAIES 129
Query: 128 LNGVELEGRAMRVSLAQ 144
LN E+ GR ++V++ +
Sbjct: 130 LNDTEVGGRKIKVNVTE 146
>gi|449462067|ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
sativus]
Length = 282
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 91/143 (63%), Gaps = 6/143 (4%)
Query: 8 LYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK------PKPKLPL 61
+ ++ GRSRGFAFVTM++ ++ A I+ D +E GR+++V F+ + PKP P
Sbjct: 119 IIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPGPP 178
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
ET KL+V NL+W V + +L F E N + ARV++D +GRS GYGFV ++T+ E
Sbjct: 179 PGETVNKLYVSNLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEA 238
Query: 122 ETALESLNGVELEGRAMRVSLAQ 144
+TAL SL G EL GR +R+ ++
Sbjct: 239 QTALSSLEGKELMGRPLRLKFSE 261
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL++ NL WS++ + + F + G V ++ ++GRSRG+ FV ++ E + A++
Sbjct: 89 KLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQ-KNGRSRGFAFVTMASPDEAQAAIQK 147
Query: 128 LNGVELEGRAMRVSLAQ 144
+ E+ GR ++V A+
Sbjct: 148 FDSQEISGRVIKVEFAK 164
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
V++D GRS G+ FV+ +T E+ + +L+G+E +GR LR+ FS++
Sbjct: 215 VVFDSPAGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRLKFSER 262
>gi|297741610|emb|CBI32742.3| unnamed protein product [Vitis vinifera]
Length = 127
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 84/142 (59%), Gaps = 21/142 (14%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V+YD+ TGRSRGF FVTMSTVE+ A + +G E GR LRVN P +
Sbjct: 2 VEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARR------ 55
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+L F E G V ARV+YD E+GRSRG+GFV Y++ E+ A
Sbjct: 56 ---------------ENTLETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRA 100
Query: 125 LESLNGVELEGRAMRVSLAQGR 146
+ESL+GV+L GR++RV++A+ R
Sbjct: 101 IESLDGVDLNGRSIRVTMAEAR 122
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPK 56
+++ V+YDRETGRSRGF FVT ++ E+ N IE+LDG + GR +RV ++ +P+
Sbjct: 69 VTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEARPR 124
>gi|115470657|ref|NP_001058927.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|34394882|dbj|BAC84331.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113610463|dbj|BAF20841.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|125557292|gb|EAZ02828.1| hypothetical protein OsI_24955 [Oryza sativa Indica Group]
gi|215695203|dbj|BAG90394.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740788|dbj|BAG96944.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 348
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 95/154 (61%), Gaps = 11/154 (7%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK----- 56
+ + ++YD+ T RSRGFAFVTM+T E+ I+ +G GR RVN+ + P+
Sbjct: 144 VDNVQIIYDKVTDRSRGFAFVTMATAEEAATAIQMFNGALLGGRTARVNYPEVPRGGERA 203
Query: 57 ------PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 110
+ + FK++ GNL W V ++L AF+ ++ ARV+++ +SGRSRG+
Sbjct: 204 VGSAAATRENRRDDGTFKIYAGNLGWGVRADALRAAFEGQPGLLDARVIFERDSGRSRGF 263
Query: 111 GFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
GFV + T + + ALE+L+GVELEGR +R+S+A+
Sbjct: 264 GFVSFRTAEDAQAALEALDGVELEGRPLRLSMAE 297
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%)
Query: 55 PKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
P P + +LFVGNL +++T+ ++Q F E G V +++YD + RSRG+ FV
Sbjct: 106 PPRSRPALGQEPGRLFVGNLPYTMTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVT 165
Query: 115 YSTKAEMETALESLNGVELEGRAMRVS 141
+T E TA++ NG L GR RV+
Sbjct: 166 MATAEEAATAIQMFNGALLGGRTARVN 192
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
V+++R++GRSRGF FV+ T ED A +E LDG E GR LR++ +++
Sbjct: 251 VIFERDSGRSRGFGFVSFRTAEDAQAALEALDGVELEGRPLRLSMAEQ 298
>gi|296089011|emb|CBI38714.3| unnamed protein product [Vitis vinifera]
Length = 166
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 90/157 (57%), Gaps = 13/157 (8%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-------- 53
+ + V + ETG SRG +VTMS++ + A I LDG + GR +RV FS
Sbjct: 8 VQSIEVCRNAETGVSRGSGYVTMSSMREAKAAIAALDGSDVGGREMRVRFSTDMNFRRRN 67
Query: 54 ----KPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
P L E+ +KL+VGNL+W++ E L F ++G VV ARV++D ++G+ R
Sbjct: 68 SEALNSAPMRNLIFESPYKLYVGNLAWAIKPEDLRNHFSQFGTVVSARVVHDRKAGKHRA 127
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
YGF+ +S+ AE E A+ SLNG E GR++ VS R
Sbjct: 128 YGFLSFSSAAECEAAM-SLNGKEFRGRSLVVSAGMKR 163
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 87 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 140
F+ +G V V + E+G SRG G+V S+ E + A+ +L+G ++ GR MRV
Sbjct: 2 FKPHGTVQSIEVCRNAETGVSRGSGYVTMSSMREAKAAIAALDGSDVGGREMRV 55
>gi|125599171|gb|EAZ38747.1| hypothetical protein OsJ_23149 [Oryza sativa Japonica Group]
Length = 220
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 95/154 (61%), Gaps = 11/154 (7%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK----- 56
+ + ++YD+ T RSRGFAFVTM+T E+ I+ +G GR RVN+ + P+
Sbjct: 16 VDNVQIIYDKVTDRSRGFAFVTMATAEEAATAIQMFNGALLGGRTARVNYPEVPRGGERA 75
Query: 57 ------PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 110
+ + FK++ GNL W V ++L AF+ ++ ARV+++ +SGRSRG+
Sbjct: 76 VGSAAATRENRRDDGTFKIYAGNLGWGVRADALRAAFEGQPGLLDARVIFERDSGRSRGF 135
Query: 111 GFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
GFV + T + + ALE+L+GVELEGR +R+S+A+
Sbjct: 136 GFVSFRTAEDAQAALEALDGVELEGRPLRLSMAE 169
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK-PKPKLPLYAET 65
V+++R++GRSRGF FV+ T ED A +E LDG E GR LR++ +++ P P ++
Sbjct: 123 VIFERDSGRSRGFGFVSFRTAEDAQAALEALDGVELEGRPLRLSMAEQNPTAGSPSTVQS 182
Query: 66 DFKLFVGNLSWSVTTESLT 84
+ S + T +S+T
Sbjct: 183 QEEETASESSDAETEQSIT 201
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 78 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 137
+T+ ++Q F E G V +++YD + RSRG+ FV +T E TA++ NG L GR
Sbjct: 1 MTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVTMATAEEAATAIQMFNGALLGGRT 60
Query: 138 MRVS 141
RV+
Sbjct: 61 ARVN 64
>gi|219885617|gb|ACL53183.1| unknown [Zea mays]
Length = 275
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 82/131 (62%), Gaps = 11/131 (8%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPKPKL 59
V+Y+RETG+SRGF FVTMSTVE+ + IE + GR+L VN + ++P+ +
Sbjct: 139 VIYNRETGQSRGFGFVTMSTVEEADKAIEMFSRYDISGRLLNVNRASSRGTRMERPQRQF 198
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
F+ +VGNL W V L Q F E+G VV A+V+YD E+GRSRG+GFV +K
Sbjct: 199 ----APAFRAYVGNLPWQVDDSRLVQLFSEHGEVVDAKVVYDRETGRSRGFGFVSMVSKE 254
Query: 120 EMETALESLNG 130
E+ A+ +L+G
Sbjct: 255 ELNDAISALDG 265
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL + V +E L Q F + G V A V+Y+ E+G+SRG+GFV ST E + A+E
Sbjct: 109 KVYVGNLPYDVDSEGLAQIFDQAGVVEVAEVIYNRETGQSRGFGFVTMSTVEEADKAIEM 168
Query: 128 LNGVELEGRAMRVSLAQGR 146
+ ++ GR + V+ A R
Sbjct: 169 FSRYDISGRLLNVNRASSR 187
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGR 40
V+YDRETGRSRGF FV+M + E+ N I LDG+
Sbjct: 233 VVYDRETGRSRGFGFVSMVSKEELNDAISALDGQ 266
>gi|20009|emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum]
Length = 292
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 93/159 (58%), Gaps = 18/159 (11%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK----- 56
++ + ++YDR T RSRGFAFVTM +VE+ I DG + GR ++VNF + P+
Sbjct: 129 VANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGERE 188
Query: 57 -------PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
+ ++ KL+V NLSW++T++ L AF + + A+V+YD SGRSRG
Sbjct: 189 VMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRG 248
Query: 110 YGFVCYSTKAEMETALESLNGV------ELEGRAMRVSL 142
+GF+ +S+ M++AL+++N V E+ R +SL
Sbjct: 249 FGFITFSSAEAMKSALDTMNEVVRIHSDEVSWRPFGISL 287
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+VGNL +S+T+ L++ F E G V ++YD + RSRG+ FV + E + A+
Sbjct: 104 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 163
Query: 128 LNGVELEGRAMRVSLAQGRR 147
+G ++ GR ++V+ + R
Sbjct: 164 FDGSQVGGRTVKVNFPEVPR 183
>gi|255573485|ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532973|gb|EEF34739.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 278
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 88/142 (61%), Gaps = 6/142 (4%)
Query: 8 LYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA---- 63
+ ++ GRSRGFAFVT+++ E+ A I+ LD E GRI+RV F+ + KP P
Sbjct: 114 IIKQKNGRSRGFAFVTLASGEEAQAAIDKLDSHEVSGRIIRVEFAKRLKPPSPPSPTGTS 173
Query: 64 --ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
ET K++V NL+W V + L + F + V +RV++D +GRS GYGFV ++T+ E
Sbjct: 174 ARETRHKIYVSNLAWKVRSTHLREFFSTNFSPVSSRVVFDSPTGRSSGYGFVSFATREEA 233
Query: 122 ETALESLNGVELEGRAMRVSLA 143
E A+ +L+G EL GR +R+ +
Sbjct: 234 EAAISALDGKELMGRPLRLKFS 255
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
V++D TGRS G+ FV+ +T E+ A I LDG+E +GR LR+ FSD+
Sbjct: 210 VVFDSPTGRSSGYGFVSFATREEAEAAISALDGKELMGRPLRLKFSDR 257
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+V NL WS++ + F + G V ++ ++GRSRG+ FV ++ E + A++
Sbjct: 84 KLYVFNLPWSLSVVDIKNLFGQCGTVTDVEIIKQ-KNGRSRGFAFVTLASGEEAQAAIDK 142
Query: 128 LNGVELEGRAMRVSLAQ 144
L+ E+ GR +RV A+
Sbjct: 143 LDSHEVSGRIIRVEFAK 159
>gi|224138286|ref|XP_002322776.1| predicted protein [Populus trichocarpa]
gi|222867406|gb|EEF04537.1| predicted protein [Populus trichocarpa]
Length = 324
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 96/154 (62%), Gaps = 13/154 (8%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK--------PK 58
V+ DR T RSRGF FVTM +VE+ I +G + GR LRVNF + P+ P+
Sbjct: 147 VICDRVTDRSRGFGFVTMESVEEAKEAIRMFNGSQVGGRTLRVNFPEVPRGGEREVMEPR 206
Query: 59 L----PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
+ + +++ K++ GNL W +T+E L AF ++ A+V+Y+ ++GRSRG+GFV
Sbjct: 207 IRSGYKGFIDSEHKIYAGNLGWRLTSEGLGDAFANQPGLLSAKVIYERDTGRSRGFGFVS 266
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+ + E ALE++NG E++GR +R++LA G RS
Sbjct: 267 FDSAENAEAALEAMNGEEVDGRPLRLNLA-GERS 299
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%)
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ A + KL+VGNL +S+T+ L + F+E G V GA V+ D + RSRG+GFV + E
Sbjct: 110 IKAREEGKLYVGNLPYSMTSSELAEVFEEAGRVFGAEVICDRVTDRSRGFGFVTMESVEE 169
Query: 121 METALESLNGVELEGRAMRVSLAQGRR 147
+ A+ NG ++ GR +RV+ + R
Sbjct: 170 AKEAIRMFNGSQVGGRTLRVNFPEVPR 196
>gi|118487510|gb|ABK95582.1| unknown [Populus trichocarpa]
Length = 198
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 96/154 (62%), Gaps = 13/154 (8%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK--------PK 58
V+ DR T RSRGF FVTM +VE+ I +G + GR LRVNF + P+ P+
Sbjct: 21 VICDRVTDRSRGFGFVTMESVEEAKEAIRMFNGSQVGGRTLRVNFPEVPRGGEREVMEPR 80
Query: 59 L----PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
+ + +++ K++ GNL W +T+E L AF ++ A+V+Y+ ++GRSRG+GFV
Sbjct: 81 IRSGYKGFIDSEHKIYAGNLGWRLTSEGLGDAFANQPGLLSAKVIYERDTGRSRGFGFVS 140
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+ + E ALE++NG E++GR +R++LA G RS
Sbjct: 141 FDSAENAEAALEAMNGEEVDGRPLRLNLA-GERS 173
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 78 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 137
+T+ L + F+E G V GA V+ D + RSRG+GFV + E + A+ NG ++ GR
Sbjct: 1 MTSSELAEVFEEAGRVFGAEVICDRVTDRSRGFGFVTMESVEEAKEAIRMFNGSQVGGRT 60
Query: 138 MRVSLAQ 144
+RV+ +
Sbjct: 61 LRVNFPE 67
>gi|88911212|gb|ABD58896.1| chloroplast single strand DNA binding protein [Mesostigma viride]
Length = 299
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 87/161 (54%), Gaps = 25/161 (15%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK---------- 56
V+ DRE+GRSRGFAFVTM++ + LDG E GR +RVNF +PK
Sbjct: 121 VVLDRESGRSRGFAFVTMASPDAAEKARRGLDGTELAGRAIRVNFP-QPKGERAPRAERG 179
Query: 57 --------------PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDG 102
P+ A +L+VGNL WS+ L F E+G V ARV+ D
Sbjct: 180 ERSERSERSERTYTPRGDGEAGDANRLYVGNLPWSMDDGMLEDLFMEFGTVNYARVVMDR 239
Query: 103 ESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
+SGRSRG+ FV ST E A+ +L+G E+ GR +RV+LA
Sbjct: 240 DSGRSRGFAFVALSTPEEANEAMANLDGEEIGGRTIRVNLA 280
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGNL+WS E L QAF ++G V A V+ D ESGRSRG+ FV ++ E A
Sbjct: 91 KLYVGNLAWSCDDEMLNQAFSQFGEVKAAEVVLDRESGRSRGFAFVTMASPDAAEKARRG 150
Query: 128 LNGVELEGRAMRVSLAQGR 146
L+G EL GRA+RV+ Q +
Sbjct: 151 LDGTELAGRAIRVNFPQPK 169
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
V+ DR++GRSRGFAFV +ST E+ N + NLDG E GR +RVN + K
Sbjct: 235 VVMDRDSGRSRGFAFVALSTPEEANEAMANLDGEEIGGRTIRVNLATK 282
>gi|225427185|ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
vinifera]
Length = 288
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 83/145 (57%), Gaps = 9/145 (6%)
Query: 8 LYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA---- 63
+ ++ GRSRG+AFVTM + E+ AV+E D E GRI+RV F+ + K P
Sbjct: 120 IIKQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFAKRFKKPSPPPPPPPA 179
Query: 64 -----ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
ET KL+V NL+W V + L + F N V RV++D SGRS GYGF ++TK
Sbjct: 180 GPPAGETRHKLYVSNLAWKVRSTHLREFFSSNFNPVSVRVVFDSPSGRSGGYGFASFATK 239
Query: 119 AEMETALESLNGVELEGRAMRVSLA 143
E E A+ +L+G EL GR + + +
Sbjct: 240 EEAEAAISALDGKELMGRPVHLKFS 264
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFV NL WS++ + F E G V ++ + GRSRGY FV + E + +E
Sbjct: 90 KLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKD-GRSRGYAFVTMDSGEEAQAVVEK 148
Query: 128 LNGVELEGRAMRVSLAQ 144
+ EL GR +RV A+
Sbjct: 149 FDSYELSGRIIRVEFAK 165
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
V++D +GRS G+ F + +T E+ A I LDG+E +GR + + FS K
Sbjct: 219 VVFDSPSGRSGGYGFASFATKEEAEAAISALDGKELMGRPVHLKFSVK 266
>gi|297742089|emb|CBI33876.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 83/145 (57%), Gaps = 9/145 (6%)
Query: 8 LYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA---- 63
+ ++ GRSRG+AFVTM + E+ AV+E D E GRI+RV F+ + K P
Sbjct: 90 IIKQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFAKRFKKPSPPPPPPPA 149
Query: 64 -----ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
ET KL+V NL+W V + L + F N V RV++D SGRS GYGF ++TK
Sbjct: 150 GPPAGETRHKLYVSNLAWKVRSTHLREFFSSNFNPVSVRVVFDSPSGRSGGYGFASFATK 209
Query: 119 AEMETALESLNGVELEGRAMRVSLA 143
E E A+ +L+G EL GR + + +
Sbjct: 210 EEAEAAISALDGKELMGRPVHLKFS 234
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 56 KPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
KP+ KLFV NL WS++ + F E G V ++ + GRSRGY FV
Sbjct: 48 KPEQTQEPNQKRKLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKD-GRSRGYAFVTM 106
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E + +E + EL GR +RV A+
Sbjct: 107 DSGEEAQAVVEKFDSYELSGRIIRVEFAK 135
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
V++D +GRS G+ F + +T E+ A I LDG+E +GR + + FS K
Sbjct: 189 VVFDSPSGRSGGYGFASFATKEEAEAAISALDGKELMGRPVHLKFSVK 236
>gi|297816490|ref|XP_002876128.1| hypothetical protein ARALYDRAFT_348313 [Arabidopsis lyrata subsp.
lyrata]
gi|297321966|gb|EFH52387.1| hypothetical protein ARALYDRAFT_348313 [Arabidopsis lyrata subsp.
lyrata]
Length = 467
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 90/150 (60%), Gaps = 11/150 (7%)
Query: 4 KLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP----KPKL 59
K+ V+YD+ +GRSR F F TM +VED NAV+E L+G GR ++VN ++KP P L
Sbjct: 104 KVQVMYDKYSGRSRRFGFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKPIASSSPDL 163
Query: 60 PL-------YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
L + ++ +K++VGNL+ +VT E L F E G VV A+V + +S G+GF
Sbjct: 164 SLLQSEDSAFVDSPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGF 223
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSL 142
V +S++ ++E A+ +LN + +SL
Sbjct: 224 VTFSSEEDVEAAILALNNSAKPSQPEMLSL 253
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
+E ++++GN+ +VT E LT+ +E+G V +V+YD SGRSR +GF + +
Sbjct: 72 SEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDAN 131
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
+E LNG +EGR ++V++ +
Sbjct: 132 AVVEKLNGNTVEGREIKVNITE 153
>gi|388499174|gb|AFK37653.1| unknown [Lotus japonicus]
Length = 302
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 92/182 (50%), Gaps = 40/182 (21%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL----- 59
+ V+YD+ TG SRGFAFVTMS+ + + + E GR LRVN PK +
Sbjct: 116 VEVIYDKTTGNSRGFAFVTMSSAAEAEVAAQQFNNYELEGRALRVNSGPPPKNENRGFNE 175
Query: 60 -PLYAETDF----------------------------------KLFVGNLSWSVTTESLT 84
P + F ++ VGNL+W V +L
Sbjct: 176 NPRFRNNSFNRGGSDSYRGGSDGYRGGGSDGYRGGGSSSYSENRVHVGNLAWGVDNAALE 235
Query: 85 QAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
F+E G VV A+V+YD ESGRSRG+GFV +S+ E+ +A+ SL+G +L GRA++VS A
Sbjct: 236 SLFREQGRVVDAKVIYDRESGRSRGFGFVTFSSPDEVNSAIRSLDGADLNGRAIKVSQAD 295
Query: 145 GR 146
+
Sbjct: 296 SK 297
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 50/76 (65%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D K+FVGNL +SV + L + FQ+ GNV V+YD +G SRG+ FV S+ AE E A
Sbjct: 86 DHKVFVGNLPFSVDSAQLAELFQDAGNVEVVEVIYDKTTGNSRGFAFVTMSSAAEAEVAA 145
Query: 126 ESLNGVELEGRAMRVS 141
+ N ELEGRA+RV+
Sbjct: 146 QQFNNYELEGRALRVN 161
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPK 56
V+YDRE+GRSRGF FVT S+ ++ N+ I +LDG + GR ++V+ +D KPK
Sbjct: 249 VIYDRESGRSRGFGFVTFSSPDEVNSAIRSLDGADLNGRAIKVSQADSKPK 299
>gi|255639378|gb|ACU19985.1| unknown [Glycine max]
Length = 142
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 83/138 (60%), Gaps = 15/138 (10%)
Query: 24 MSTVEDCNAVIENLDGREYLGRILRVNFSDKP--KPKLPLY-------------AETDFK 68
MS+VE+ A + +G E GR LRVN P P + ++++ +
Sbjct: 1 MSSVEEAEAAAQQFNGYELDGRALRVNSGPPPARNESAPRFRGGSSFGSRGGGPSDSENR 60
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+ V NL+W V +L F+E GNV+ AR +YD ESGRSRG+GFV +S+ E+ +A++SL
Sbjct: 61 VHVSNLAWGVDNVALKSLFREQGNVLEARAIYDRESGRSRGFGFVTFSSPDEVNSAIQSL 120
Query: 129 NGVELEGRAMRVSLAQGR 146
NGV+L GRA+RVSLA +
Sbjct: 121 NGVDLNGRAIRVSLADSK 138
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPK 56
+YDRE+GRSRGF FVT S+ ++ N+ I++L+G + GR +RV+ +D KPK
Sbjct: 90 AIYDRESGRSRGFGFVTFSSPDEVNSAIQSLNGVDLNGRAIRVSLADSKPK 140
>gi|4678944|emb|CAB41335.1| putative protein [Arabidopsis thaliana]
Length = 546
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 90/150 (60%), Gaps = 17/150 (11%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYL-------GRILRVNFSDKP---K 56
V+YD+ +GRSR F F TM +VED NAV+E L+G GR ++VN ++KP
Sbjct: 105 VMYDKYSGRSRRFGFATMKSVEDANAVVEKLNGNSLFLVSQTVEGREIKVNITEKPIASS 164
Query: 57 PKLPL-------YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
P L + + ++ +K++VGNL+ +VT E L F E G VV A+V + +S G
Sbjct: 165 PDLSVLQSEDSAFVDSPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTG 224
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GFV +S++ ++E A+ +LN LEG+ +R
Sbjct: 225 FGFVTFSSEEDVEAAIVALNNSLLEGQKIR 254
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 53 DKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
+KP P +E ++++GN+ +VT E LT+ +E+G V +V+YD SGRSR +GF
Sbjct: 63 EKPAALDP-SSEAARRVYIGNIPRTVTNEQLTKLVEEHGAV--EKVMYDKYSGRSRRFGF 119
Query: 113 VCYSTKAEMETALESLNGVEL-------EGRAMRVSLAQ 144
+ + +E LNG L EGR ++V++ +
Sbjct: 120 ATMKSVEDANAVVEKLNGNSLFLVSQTVEGREIKVNITE 158
>gi|255548039|ref|XP_002515076.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223545556|gb|EEF47060.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 281
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 84/143 (58%), Gaps = 13/143 (9%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPKP--KLP 60
+ ETG SRG FVTM ++ I LDG + GR +RV FS P+P P
Sbjct: 132 NPETGISRGCGFVTMGSINSAKNAIAALDGSDIGGREMRVKFSVDMNSGRRNPEPLSSAP 191
Query: 61 ---LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
L+ E+ FK++VGNL+W+V E L F ++G VV ARVLYD ++G++R YGF+ +S+
Sbjct: 192 TKNLFYESPFKVYVGNLAWTVKPEELRDQFSKFGTVVSARVLYDRKAGKNRAYGFLSFSS 251
Query: 118 KAEMETALESLNGVELEGRAMRV 140
E + AL S NG + GR + V
Sbjct: 252 TKERDAAL-SFNGKDFRGRILVV 273
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 25/140 (17%)
Query: 21 FVTMSTVEDCNAVIENLD--------GREYLGRILRVNFSDKPKPKLPLYAETDFKLFVG 72
F ++ V + + V E +D + LGR L+ +P+P +L+V
Sbjct: 57 FAILALVNEESVVAEEVDREENENESEEDELGRQLK----KQPRP---------CELYVC 103
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
NL S L + F+ YG V+ V + E+G SRG GFV + + A+ +L+G +
Sbjct: 104 NLPRSCDIAELVELFKPYGTVISVEVSRNPETGISRGCGFVTMGSINSAKNAIAALDGSD 163
Query: 133 LEGRAMRVSLA----QGRRS 148
+ GR MRV + GRR+
Sbjct: 164 IGGREMRVKFSVDMNSGRRN 183
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
VLYDR+ G++R + F++ S+ ++ +A + + +G+++ GRIL V
Sbjct: 232 VLYDRKAGKNRAYGFLSFSSTKERDAAL-SFNGKDFRGRILVV 273
>gi|414884784|tpg|DAA60798.1| TPA: hypothetical protein ZEAMMB73_633133 [Zea mays]
Length = 244
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 95/146 (65%), Gaps = 10/146 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK---------PKP 57
V+YD+ T RSR F FVTMST E+ NA +E L+G E R ++VN ++ P+P
Sbjct: 100 VMYDKYTNRSRRFGFVTMSTAEEANAAVEALNGTEVGDRKIKVNVTESFLPNIDRSAPEP 159
Query: 58 KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
+ L+ ++ +K++VGNL+ +VTTE L F E GN++ A V + + +S+GYGFV +S+
Sbjct: 160 EA-LFVDSQYKVYVGNLAKTVTTEVLKNFFSEKGNILSATVSHIPGTSKSKGYGFVTFSS 218
Query: 118 KAEMETALESLNGVELEGRAMRVSLA 143
+ E+E A+ + N ELEG+ +RV+ A
Sbjct: 219 EEEVEAAVATFNNAELEGQLIRVNRA 244
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGN+ +VT + L F +G V A V+YD + RSR +GFV ST E A+E+
Sbjct: 70 KLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTAEEANAAVEA 129
Query: 128 LNGVELEGRAMRVSLAQ 144
LNG E+ R ++V++ +
Sbjct: 130 LNGTEVGDRKIKVNVTE 146
>gi|255636284|gb|ACU18482.1| unknown [Glycine max]
Length = 280
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 78/132 (59%), Gaps = 12/132 (9%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK-------- 58
V+Y+R T RSRGF FVTMST+E+ +E G E GR+L VN K PK
Sbjct: 148 VIYNRATDRSRGFGFVTMSTLEELKKAVEMFSGYELNGRVLTVN---KAAPKGAQPERPP 204
Query: 59 -LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
P + +++VGNL W V L Q F E+G V ARV+YD E+GRSRG+GFV S+
Sbjct: 205 RPPRSFSSGLRVYVGNLPWEVDDARLEQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSS 264
Query: 118 KAEMETALESLN 129
+ +M A+ +L+
Sbjct: 265 ETDMNDAIAALD 276
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AE D K+FVGNL + + +E+L F + G V A V+Y+ + RSRG+GFV ST E++
Sbjct: 114 AEED-KIFVGNLPFDIDSENLASLFGQAGTVEVAEVIYNRATDRSRGFGFVTMSTLEELK 172
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+E +G EL GR + V+ A +
Sbjct: 173 KAVEMFSGYELNGRVLTVNKAAPK 196
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 25/34 (73%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGR 40
V+YDRETGRSRGF FVTMS+ D N I LD R
Sbjct: 245 VVYDRETGRSRGFGFVTMSSETDMNDAIAALDVR 278
>gi|414883567|tpg|DAA59581.1| TPA: hypothetical protein ZEAMMB73_267259 [Zea mays]
Length = 385
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 94/195 (48%), Gaps = 62/195 (31%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYL----------------------- 43
++YD+ T RSRGFAFVTM+T E+ I+ DG
Sbjct: 143 IIYDKVTNRSRGFAFVTMATAEEAAKAIQMFDGAVSTAPANWISTSTPHRIGILLLPMNV 202
Query: 44 ---------------------GRILRVNFSDKPKPKLPLYAET-------------DFKL 69
GR RVN+ P++P E +K+
Sbjct: 203 QACVLTSDRSLAHSSPMQLLGGRTARVNY-----PEVPRGGERRTVTMSGRRRDDGTYKI 257
Query: 70 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 129
+ GNL W V ++L F+ ++ ARV+++ E+GRSRG+GFV +ST + + ALESL+
Sbjct: 258 YAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALESLD 317
Query: 130 GVELEGRAMRVSLAQ 144
GVELEGR++R+SLA+
Sbjct: 318 GVELEGRSLRLSLAE 332
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK-PKPKLP 60
V+++RETGRSRGF FV+ ST ED A +E+LDG E GR LR++ +++ P P P
Sbjct: 286 VIFERETGRSRGFGFVSFSTAEDAQAALESLDGVELEGRSLRLSLAEQNPPPGSP 340
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
P + +LFVGNL ++ T+E L Q F E G V A+++YD + RSRG+ FV +T
Sbjct: 105 PPRGDDPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAE 164
Query: 120 EMETALESLNGV 131
E A++ +G
Sbjct: 165 EAAKAIQMFDGA 176
>gi|42407940|dbj|BAD09079.1| nucleic acid-binding protein-like [Oryza sativa Japonica Group]
Length = 131
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Query: 24 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK----PKLPLYAETDFKLFVGNLSWSVT 79
MST+E+ + IE L+ + GR+L VN + P+ + P F+ +VGNL W V
Sbjct: 1 MSTIEEADKAIEMLNRYDINGRLLNVNRA-APRGSRVERPPRQFAPAFRAYVGNLPWQVD 59
Query: 80 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
L Q F E+G VV A V+YD ESGRSRG+GFV ++K E++ A+ +L+G EL+GR +R
Sbjct: 60 DSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLR 119
Query: 140 VSLAQGR 146
V++A R
Sbjct: 120 VNVAAER 126
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF-SDKPK 56
+V+YDRE+GRSRGF FV+M++ E+ + I LDG+E GR LRVN +++P+
Sbjct: 77 SVVYDRESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLRVNVAAERPQ 128
>gi|412986787|emb|CCO15213.1| predicted protein [Bathycoccus prasinos]
Length = 260
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 9/149 (6%)
Query: 3 SKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP------- 55
S ++ DR TGRSRGF F T+ + E ++ I L+ + GR +RV S P
Sbjct: 100 SDCVIVTDRNTGRSRGFGFATVPSQEMADSAIAALNDSDQFGRQMRVVISLPPEERPARE 159
Query: 56 -KPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
+PK A+ K++ GNLSW + L E+GNV +R++ D E+GRSRG+GFV
Sbjct: 160 QRPKRNWDADGR-KVYFGNLSWGMDHLDLQDLCAEFGNVDESRLITDRETGRSRGFGFVT 218
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLA 143
S++ E E + LNG +++GR +RV++A
Sbjct: 219 MSSEKEAEDVVAQLNGQDVDGRVLRVNIA 247
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL++GNLSW + ++L F +Y ++ D +GRSRG+GF ++ ++A+ +
Sbjct: 75 KLYIGNLSWDMDDQALNDLFSQY-QASDCVIVTDRNTGRSRGFGFATVPSQEMADSAIAA 133
Query: 128 LNGVELEGRAMRVSLA 143
LN + GR MRV ++
Sbjct: 134 LNDSDQFGRQMRVVIS 149
>gi|226288243|gb|EEH43755.1| 28 kDa ribonucleoprotein [Paracoccidioides brasiliensis Pb18]
Length = 492
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 15/161 (9%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK-----PK 56
L+ + ++ DR+TGRS+GF +V + ED E GR L V+F++ P+
Sbjct: 273 LAGVRIVTDRDTGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPR 332
Query: 57 PKLPLYA---------ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS 107
+ A E+D LF+GN+++S +++ F EYG+++G R+ D ESGR
Sbjct: 333 DRAQSRAQNFGDQRSPESDT-LFIGNIAFSADENMISETFAEYGSILGVRLPTDPESGRP 391
Query: 108 RGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+G+G+V +S+ E +A ESLNG EL GRAMR+ + R++
Sbjct: 392 KGFGYVQFSSIDEARSAFESLNGSELAGRAMRLDFSTPRQN 432
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LF+GNLSW+V E L F+E+G + G R++ D ++GRS+G+G+V ++ + A +
Sbjct: 249 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDTGRSKGFGYVEFTNAEDAVKAHAAK 308
Query: 129 NGVELEGRAMRVSLAQGR 146
EL+GR + V A R
Sbjct: 309 KDTELDGRKLNVDFANAR 326
>gi|303286031|ref|XP_003062305.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455822|gb|EEH53124.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 227
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 83/155 (53%), Gaps = 13/155 (8%)
Query: 3 SKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK---- 58
S + V+ D TGRSRGF FV + + E I LDG + GR +RVN S+ +
Sbjct: 69 SGIAVISDMNTGRSRGFGFVEVPSQEIAEKAIAELDGADVDGRPIRVNISEARSSRREYD 128
Query: 59 ------LPLYAETDF---KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
P DF K++ GNLSW + L EYG V +R++ D E+GRSRG
Sbjct: 129 GERGERAPRERNYDFDARKVYFGNLSWGMDHLDLQDLCGEYGEVADSRLITDRETGRSRG 188
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+GFV S+ + E + LNG +++GR +RV++A
Sbjct: 189 FGFVTMSSAEQAEKVVNGLNGQDVDGRVLRVNIAN 223
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGNLSW V LT F EY + G V+ D +GRSRG+GFV ++ E A+
Sbjct: 44 KLYVGNLSWGVDDSMLTDVFAEY-DASGIAVISDMNTGRSRGFGFVEVPSQEIAEKAIAE 102
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
L+G +++GR +RV++++ R S
Sbjct: 103 LDGADVDGRPIRVNISEARSS 123
>gi|308807591|ref|XP_003081106.1| Ps16 protein (ISS) [Ostreococcus tauri]
gi|116059568|emb|CAL55275.1| Ps16 protein (ISS) [Ostreococcus tauri]
Length = 1094
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 86/156 (55%), Gaps = 25/156 (16%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE- 64
+V+ DRETGRSRGFAFV+M+ ED L+GRE GR LRV+ K AE
Sbjct: 943 SVMKDRETGRSRGFAFVSMNNEEDVERASAALNGREVDGRELRVS-------KAQAQAER 995
Query: 65 -----------TDF------KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS 107
DF +++ GNLSW + L E+G+V +R++ D ++GRS
Sbjct: 996 GERPMRMPRQRRDFDQAEGRRVYFGNLSWGMDQYDLQDLCSEFGSVEDSRLITDRDTGRS 1055
Query: 108 RGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
RG+GFV S E + + LNG +++GR +RV++A
Sbjct: 1056 RGFGFVTMSNTTEADEVVAQLNGQDVDGRVLRVNIA 1091
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ + +++VGNLSW VT ESL + F E+ +V A V+ D E+GRSRG+ FV + + ++E
Sbjct: 911 QDEHRVYVGNLSWGVTDESLAELFSEF-DVRDASVMKDRETGRSRGFAFVSMNNEEDVER 969
Query: 124 ALESLNGVELEGRAMRVSLAQGR 146
A +LNG E++GR +RVS AQ +
Sbjct: 970 ASAALNGREVDGRELRVSKAQAQ 992
>gi|300121123|emb|CBK21504.2| unnamed protein product [Blastocystis hominis]
Length = 302
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 89/148 (60%), Gaps = 15/148 (10%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV-NFSDKPK--------- 56
V+ +RE +SRGF FVT ++ N +E +G E+ GR ++V +++PK
Sbjct: 35 VMVNRENKKSRGFGFVTFASEAAFNNALEK-NGAEFDGRTIKVEKATERPKRDQKENKDR 93
Query: 57 PKLPLYAETDF----KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
P+ A +F K+ + +L+WSV +SL QAF +YGN+ VL D +SG+SRG G
Sbjct: 94 PQHEQAAPKEFIDTNKIIITSLAWSVNDDSLRQAFSKYGNLEECTVLKDRQSGKSRGRGI 153
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRV 140
V ++T+ M+ A+E +NG ELEGRA+ V
Sbjct: 154 VRFATEEAMKKAIEEMNGTELEGRAIAV 181
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K+ V L +S +L FQE G + +RV+ + E+ +SRG+GFV ++++A ALE
Sbjct: 5 KVIVLGLPFSCDDSALYDYFQECGEITDSRVMVNRENKKSRGFGFVTFASEAAFNNALEK 64
Query: 128 LNGVELEGRAMRVSLAQGR 146
NG E +GR ++V A R
Sbjct: 65 -NGAEFDGRTIKVEKATER 82
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
L + TVL DR++G+SRG V +T E IE ++G E GR + V
Sbjct: 134 LEECTVLKDRQSGKSRGRGIVRFATEEAMKKAIEEMNGTELEGRAIAV 181
>gi|15226983|ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|3608147|gb|AAC36180.1| putative chloroplast RNA binding protein precursor [Arabidopsis
thaliana]
gi|14596023|gb|AAK68739.1| putative chloroplast RNA binding protein precursor [Arabidopsis
thaliana]
gi|23198314|gb|AAN15684.1| putative chloroplast RNA binding protein precursor [Arabidopsis
thaliana]
gi|330254012|gb|AEC09106.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 308
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 82/143 (57%), Gaps = 10/143 (6%)
Query: 11 RETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS---DKPKPKLP------L 61
++ G++RGFAFVTM++ E+ A I+ D + GRI+ V+F+ KP PK P
Sbjct: 129 QKDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFARRFKKPTPKSPNDLPSPA 188
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYG-NVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+T KL+V NL+W + L + F N V ARV++ GRS GYGFV ++T+ E
Sbjct: 189 PGDTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGRSSGYGFVSFATREE 248
Query: 121 METALESLNGVELEGRAMRVSLA 143
E A+ LNG E+ GR + + +
Sbjct: 249 AENAITKLNGKEIMGRPITLKFS 271
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFV NL WS++ +++ F + G V ++ + G++RG+ FV ++ E + A++
Sbjct: 96 KLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKD-GKNRGFAFVTMASGEEAQAAIDK 154
Query: 128 LNGVELEGRAMRVSLAQ 144
+ ++ GR + VS A+
Sbjct: 155 FDTFQVSGRIISVSFAR 171
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
V++ GRS G+ FV+ +T E+ I L+G+E +GR + + FS
Sbjct: 226 VVFADPEGRSSGYGFVSFATREEAENAITKLNGKEIMGRPITLKFS 271
>gi|295672357|ref|XP_002796725.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283705|gb|EEH39271.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 474
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 92/160 (57%), Gaps = 13/160 (8%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK-----PK 56
L+ + ++ DR++GRS+GF +V + ED E GR L V+F++ P+
Sbjct: 257 LAGVRIVTDRDSGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPR 316
Query: 57 PKLPLYAET--DFK------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSR 108
+ A+ D K LF+GN+++S +++ F EYG+++G R+ D ESGR +
Sbjct: 317 DRAQSRAQNFGDQKSPESDTLFIGNIAFSADESMISETFAEYGSILGVRLPTDPESGRPK 376
Query: 109 GYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
G+G+V +S+ E +A ESLNG EL GRAMR+ + R++
Sbjct: 377 GFGYVQFSSIDEARSAFESLNGSELAGRAMRLDFSTPRQN 416
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LF+GNLSW+V E L F+E+G + G R++ D +SGRS+G+G+V ++ + A +
Sbjct: 233 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSKGFGYVEFTNAEDAVKAHAAK 292
Query: 129 NGVELEGRAMRVSLAQGR 146
EL+GR + V A R
Sbjct: 293 KDTELDGRKLNVDFANAR 310
>gi|225683278|gb|EEH21562.1| nuclear localization sequence-binding protein [Paracoccidioides
brasiliensis Pb03]
Length = 492
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 92/161 (57%), Gaps = 15/161 (9%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK-----PK 56
L+ + ++ DR++GRS+GF +V + ED E GR L V+F++ P+
Sbjct: 273 LAGVRIVTDRDSGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPR 332
Query: 57 PKLPLYA---------ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS 107
+ A E+D LF+GN+++S +++ F EYG+++G R+ D ESGR
Sbjct: 333 DRAQSRAQNFGDQRSPESDT-LFIGNIAFSADENMISETFAEYGSILGVRLPTDPESGRP 391
Query: 108 RGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+G+G+V +S+ E +A ESLNG EL GRAMR+ + R++
Sbjct: 392 KGFGYVQFSSIDEARSAFESLNGSELAGRAMRLDFSTPRQN 432
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LF+GNLSW+V E L F+E+G + G R++ D +SGRS+G+G+V ++ + A +
Sbjct: 249 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSKGFGYVEFTNAEDAVKAHAAK 308
Query: 129 NGVELEGRAMRVSLAQGR 146
EL+GR + V A R
Sbjct: 309 KDTELDGRKLNVDFANAR 326
>gi|255075095|ref|XP_002501222.1| predicted protein [Micromonas sp. RCC299]
gi|226516486|gb|ACO62480.1| predicted protein [Micromonas sp. RCC299]
Length = 199
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 85/154 (55%), Gaps = 12/154 (7%)
Query: 3 SKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLY 62
S +TV+ D TGRSRGF FVT+ +A I LDG + GR +RVN S + + P
Sbjct: 43 SDVTVVTDMNTGRSRGFGFVTVPDQAVADACIAALDGADVDGRAIRVNVSVAREDRPPRP 102
Query: 63 AET---------DF---KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 110
DF K++ GNLSW + L E+G V AR++ D E+ RSRG+
Sbjct: 103 DRPPRDGQRRGYDFDGRKVYFGNLSWGMDHLDLQDLCGEFGTVEDARLITDRETNRSRGF 162
Query: 111 GFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
GFV ST AE E + LNG +++GR +RV++A
Sbjct: 163 GFVTMSTVAEAEEVVNQLNGQDVDGRVLRVNIAN 196
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+ E KL+VGNLSW VT +SL F +YG V+ D +GRSRG+GFV +A
Sbjct: 10 AVSGEEGVKLYVGNLSWGVTNDSLADVFNQYG-ASDVTVVTDMNTGRSRGFGFVTVPDQA 68
Query: 120 EMETALESLNGVELEGRAMRVSLA 143
+ + +L+G +++GRA+RV+++
Sbjct: 69 VADACIAALDGADVDGRAIRVNVS 92
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK 56
++ DRET RSRGF FVTMSTV + V+ L+G++ GR+LRVN ++ K
Sbjct: 150 LITDRETNRSRGFGFVTMSTVAEAEEVVNQLNGQDVDGRVLRVNIANVDK 199
>gi|145348372|ref|XP_001418624.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578854|gb|ABO96917.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 151
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 89/148 (60%), Gaps = 15/148 (10%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-------DKP------- 55
DR TGRSRGFAFVT+++ ED + +G + GR LRV+ + D+P
Sbjct: 2 DRNTGRSRGFAFVTLASAEDMERAMAATNGVDVDGRELRVSQAQTAGERRDRPMRMDGER 61
Query: 56 KPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
+P+ A+ +++ GNLSW + L E+G+V +R++ D E+GRSRG+GFV
Sbjct: 62 RPQRNRDADN-RRVYFGNLSWGMDHLDLQDLCGEFGSVEDSRLITDRETGRSRGFGFVTM 120
Query: 116 STKAEMETALESLNGVELEGRAMRVSLA 143
S++AE + + LNG +++GR +RV++A
Sbjct: 121 SSEAEADEVVAQLNGQDVDGRVLRVNIA 148
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
++ DRETGRSRGF FVTMS+ + + V+ L+G++ GR+LRVN ++
Sbjct: 103 LITDRETGRSRGFGFVTMSSEAEADEVVAQLNGQDVDGRVLRVNIAN 149
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 101 DGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
D +GRSRG+ FV ++ +ME A+ + NGV+++GR +RVS AQ
Sbjct: 2 DRNTGRSRGFAFVTLASAEDMERAMAATNGVDVDGRELRVSQAQ 45
>gi|413921822|gb|AFW61754.1| hypothetical protein ZEAMMB73_478558 [Zea mays]
Length = 131
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 78/130 (60%), Gaps = 11/130 (8%)
Query: 24 MSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPKPKLPLYAETDFKLFVGNLSW 76
MSTVE+ + IE + GR+L VN + ++P+ + F+ +VGNL W
Sbjct: 1 MSTVEEADKAIEMFSRYDISGRLLNVNRASSRGTRMERPQRQFA----PAFRAYVGNLPW 56
Query: 77 SVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGR 136
V L Q F E+G VV A+V+YD E+GRSRG+GFV +K E+ A+ +L+G EL+GR
Sbjct: 57 QVDDSRLVQLFSEHGEVVDAKVVYDRETGRSRGFGFVSMVSKEELNDAISALDGQELDGR 116
Query: 137 AMRVSLAQGR 146
+RV++A R
Sbjct: 117 PLRVNVAAER 126
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF-SDKPK 56
V+YDRETGRSRGF FV+M + E+ N I LDG+E GR LRVN +++P+
Sbjct: 78 VVYDRETGRSRGFGFVSMVSKEELNDAISALDGQELDGRPLRVNVAAERPQ 128
>gi|302673016|ref|XP_003026195.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
gi|300099876|gb|EFI91292.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
Length = 218
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 84/159 (52%), Gaps = 13/159 (8%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+ V+ DR+TG SRGF +V +T E E +DG E GR +R + KP+PK
Sbjct: 29 IESAIVMMDRQTGNSRGFGYVHFATHEQAKKAKEEMDGYELDGRNIRTGTATKPQPKGAH 88
Query: 62 ------------YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
+E LFVGNLSWS T +++ F EYG V R+ + E+GR +G
Sbjct: 89 DPSSRARQFGDKPSEPSSTLFVGNLSWSATEDAVWGLFNEYG-VKNVRLPTEFETGRPKG 147
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+G+V + + A E+L G EL+GR +R+ +Q R S
Sbjct: 148 FGYVEFEDIEGAKKAYEALAGAELDGRNIRLDYSQPRDS 186
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG L + V + L Q F ++G++ A V+ D ++G SRG+G+V ++T + + A E +
Sbjct: 5 VFVGGLPFDVDNDRLQQEFAKFGDIESAIVMMDRQTGNSRGFGYVHFATHEQAKKAKEEM 64
Query: 129 NGVELEGRAMRVSLA 143
+G EL+GR +R A
Sbjct: 65 DGYELDGRNIRTGTA 79
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 59/151 (39%), Positives = 88/151 (58%), Gaps = 11/151 (7%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP------KPKL 59
TV DR TGRSRGF +V ST E IE L+G+E GR + V+ S+ P + +
Sbjct: 363 TVQMDRSTGRSRGFGYVHFSTSEAVEKAIE-LNGKEIDGRAVNVDKSNPPNKDASREKRA 421
Query: 60 PLYAET----DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
+ +T LFVGNLS+ + ++L +AF E+G V R+ D ESGR +G+G+V +
Sbjct: 422 KTFGDTTSPPSATLFVGNLSFGMNDDALWEAFSEHGEVKNVRLPTDRESGRPKGFGYVEF 481
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQGR 146
S + A ++ GVEL+GR++R+ +Q R
Sbjct: 482 SDVETAKKAHAAMQGVELDGRSVRLDFSQPR 512
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG LSW+V + L + F E G VV A V D +GRSRG+G+V +ST +E A+E L
Sbjct: 335 IFVGRLSWNVDNDWLAKEFAECGEVVSATVQMDRSTGRSRGFGYVHFSTSEAVEKAIE-L 393
Query: 129 NGVELEGRAMRV 140
NG E++GRA+ V
Sbjct: 394 NGKEIDGRAVNV 405
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 92/154 (59%), Gaps = 17/154 (11%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP--------- 57
V++DR++ +SRGF +V + +E IE DG E GR +RVN++ + KP
Sbjct: 225 VVFDRDSQKSRGFGYVEFADLEASAKAIEK-DGSEIDGRAIRVNYATQRKPNEAAEKRAK 283
Query: 58 ----KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
K AET L++G+LS+SVT + + +AF ++G+V R+ D ++G +G+G+V
Sbjct: 284 VFNDKQSPPAET---LWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYV 340
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSLAQGRR 147
+S+ + AL+++NG E+ GRA+RV A ++
Sbjct: 341 QFSSVEDASAALKAMNGAEIAGRAIRVDFAPPKQ 374
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG LSW+V + L F+ G VV ARV++D +S +SRG+G+V + A++E + +++
Sbjct: 196 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEF---ADLEASAKAI 252
Query: 129 --NGVELEGRAMRVSLAQGRR 147
+G E++GRA+RV+ A R+
Sbjct: 253 EKDGSEIDGRAIRVNYATQRK 273
>gi|357440095|ref|XP_003590325.1| 33 kDa ribonucleoprotein [Medicago truncatula]
gi|355479373|gb|AES60576.1| 33 kDa ribonucleoprotein [Medicago truncatula]
Length = 156
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 18/137 (13%)
Query: 24 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL-------------YAETDFKLF 70
M VED I DG GR ++VNF P++P+ Y ++ K++
Sbjct: 1 MGNVEDAEEAIRMFDGTTVGGRAIKVNF-----PEVPIVGKRVQMGSTYRGYVDSPHKIY 55
Query: 71 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 130
GNL W +T++ L +AF + ++ A+V+Y+ +G+SRGYGFV + T ++E AL ++NG
Sbjct: 56 AGNLGWDMTSQYLRKAFAKQPGLLSAKVVYERNNGKSRGYGFVSFETAEDVEVALSAMNG 115
Query: 131 VELEGRAMRVSLAQGRR 147
VE++GR +R+ LA R
Sbjct: 116 VEVQGRPLRLKLAVDNR 132
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-DKPKP 57
V+Y+R G+SRG+ FV+ T ED + ++G E GR LR+ + D KP
Sbjct: 83 VVYERNNGKSRGYGFVSFETAEDVEVALSAMNGVEVQGRPLRLKLAVDNRKP 134
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 92/154 (59%), Gaps = 17/154 (11%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP--------- 57
V++DR++ +SRGF +V + +E IE DG E GR +RVN++ + KP
Sbjct: 227 VVFDRDSQKSRGFGYVEFADLESSAKAIEK-DGSEIDGRAIRVNYATQRKPNEAAEKRAR 285
Query: 58 ----KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
K AET L++G+LS+SVT + + +AF ++G+V R+ D ++G +G+G+V
Sbjct: 286 VFNDKQSPPAET---LWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYV 342
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSLAQGRR 147
+S+ + AL+++NG E+ GRA+RV A ++
Sbjct: 343 QFSSVDDASAALKAMNGAEIAGRAIRVDFAPPKQ 376
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG LSW+V + L F+ G VV ARV++D +S +SRG+G+V + A++E++ +++
Sbjct: 198 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEF---ADLESSAKAI 254
Query: 129 --NGVELEGRAMRVSLAQGRR 147
+G E++GRA+RV+ A R+
Sbjct: 255 EKDGSEIDGRAIRVNYATQRK 275
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 92/154 (59%), Gaps = 17/154 (11%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP--------- 57
V++DR++ +SRGF +V + +E IE DG E GR +RVN++ + KP
Sbjct: 224 VVFDRDSQKSRGFGYVEFADLESSAKAIEK-DGSEIDGRAIRVNYATQRKPNEAAEKRAR 282
Query: 58 ----KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
K AET L++G+LS+SVT + + +AF ++G+V R+ D ++G +G+G+V
Sbjct: 283 VFNDKQSPPAET---LWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYV 339
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSLAQGRR 147
+S+ + AL+++NG E+ GRA+RV A ++
Sbjct: 340 QFSSVDDASAALKAMNGAEIAGRAIRVDFAPPKQ 373
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG LSW+V + L F+ G VV ARV++D +S +SRG+G+V + A++E++ +++
Sbjct: 195 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEF---ADLESSAKAI 251
Query: 129 --NGVELEGRAMRVSLAQGRR 147
+G E++GRA+RV+ A R+
Sbjct: 252 EKDGSEIDGRAIRVNYATQRK 272
>gi|297823333|ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arabidopsis lyrata subsp.
lyrata]
gi|297325388|gb|EFH55808.1| hypothetical protein ARALYDRAFT_482506 [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 80/138 (57%), Gaps = 10/138 (7%)
Query: 11 RETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS---DKPKPKLPLY----- 62
++ G++RGFAFVTM++ E+ A I+ D + GRI+ VNF+ KP PK P
Sbjct: 129 QKDGKNRGFAFVTMASGEEAQAAIDKFDTSQVSGRIISVNFARRFKKPTPKPPNDLPSPP 188
Query: 63 -AETDFKLFVGNLSWSVTTESLTQAFQEYG-NVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+T KL+V NL+W + L + F N V ARV++ GRS GYGFV ++T+ E
Sbjct: 189 PGDTRHKLYVSNLAWKARSTHLRELFTASDFNPVSARVVFADPEGRSSGYGFVSFATREE 248
Query: 121 METALESLNGVELEGRAM 138
E A+ L+G E+ GR +
Sbjct: 249 AEDAIAKLDGKEIMGRPI 266
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFV NL WS++ +++ F + G V ++ + G++RG+ FV ++ E + A++
Sbjct: 96 KLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKD-GKNRGFAFVTMASGEEAQAAIDK 154
Query: 128 LNGVELEGRAMRVSLAQ 144
+ ++ GR + V+ A+
Sbjct: 155 FDTSQVSGRIISVNFAR 171
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
V++ GRS G+ FV+ +T E+ I LDG+E +GR + + FS
Sbjct: 226 VVFADPEGRSSGYGFVSFATREEAEDAIAKLDGKEIMGRPIILKFS 271
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 87/146 (59%), Gaps = 8/146 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK----PKPKLPLY 62
V DR +G+SRGFA+V S+ + +E ++G++ GR + V+ S P+ + ++
Sbjct: 141 VQMDRNSGKSRGFAYVEFSSPAEAQKAVEEMNGKQIDGREVNVDISQPRQPNPEKRAQVF 200
Query: 63 AETDFK----LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
+++ + LFVGNLSW+ T + L AF E+G+V R+ D ESG+ +G+G+V + +
Sbjct: 201 GDSESQPSTTLFVGNLSWNTTEDGLWTAFGEFGDVTHVRLPTDQESGKPKGFGYVEFGDQ 260
Query: 119 AEMETALESLNGVELEGRAMRVSLAQ 144
A E++ G +L+GR +R+ +Q
Sbjct: 261 EGATKAYEAMKGKDLDGRTLRLDYSQ 286
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 54/80 (67%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG LSW+V + L Q FQ G VV ARV D SG+SRG+ +V +S+ AE + A+E +
Sbjct: 112 VFVGRLSWNVDNDWLAQEFQGCGTVVAARVQMDRNSGKSRGFAYVEFSSPAEAQKAVEEM 171
Query: 129 NGVELEGRAMRVSLAQGRRS 148
NG +++GR + V ++Q R+
Sbjct: 172 NGKQIDGREVNVDISQPRQP 191
>gi|363750866|ref|XP_003645650.1| hypothetical protein Ecym_3344 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889284|gb|AET38833.1| Hypothetical protein Ecym_3344 [Eremothecium cymbalariae
DBVPG#7215]
Length = 421
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 86/147 (58%), Gaps = 4/147 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + VL D+ + +AFV D N + LDG++ G ++++N++ + + +
Sbjct: 89 IANVKVLVDKNNEEAN-YAFVEYHQPHDANVAFQTLDGKQIEGNVIKINWAFQSQH---V 144
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
++ F LFVG+L+ V E+LT F+E+ + + A V++D SGRSRGYGFV +S +
Sbjct: 145 SSDDTFNLFVGDLNVDVDDETLTGTFKEFPSFIQAHVMWDMLSGRSRGYGFVSFSEQDVA 204
Query: 122 ETALESLNGVELEGRAMRVSLAQGRRS 148
+ A+ES G L GRA+R++ A R
Sbjct: 205 QQAMESKQGFILNGRAIRINWASKREP 231
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+D L+VGNL ++ ++L Q FQ G + +VL D ++ Y FV Y + A
Sbjct: 61 SDRILYVGNLDKAINEDTLKQYFQVGGPIANVKVLVD-KNNEEANYAFVEYHQPHDANVA 119
Query: 125 LESLNGVELEGRAMRVSLA 143
++L+G ++EG ++++ A
Sbjct: 120 FQTLDGKQIEGNVIKINWA 138
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V++D +GRSRG+ FV+ S + +E+ G GR +R+N++ K +P+
Sbjct: 181 VMWDMLSGRSRGYGFVSFSEQDVAQQAMESKQGFILNGRAIRINWASKREPQ 232
>gi|258575439|ref|XP_002541901.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902167|gb|EEP76568.1| predicted protein [Uncinocarpus reesii 1704]
Length = 503
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 88/162 (54%), Gaps = 16/162 (9%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS--------- 52
LS + ++ DR++GRSRGF +V + ED E G E GR L ++++
Sbjct: 291 LSGVRIVTDRDSGRSRGFGYVEFTNAEDAAKAFEAKKGAELDGRPLNLDYANARQNAGGA 350
Query: 53 -DKPKPKLPLY-----AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR 106
D+ + + + E+D LF+GN+S+ ++ + F YG + G R+ D ESGR
Sbjct: 351 KDRSQARAKSFGDQTSPESDT-LFIGNISFGADENAIQETFSSYGTISGIRLPTDPESGR 409
Query: 107 SRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+G+G++ +S+ E +AL L G EL GRAMR+ + R++
Sbjct: 410 PKGFGYIQFSSVDEARSALNELQGSELAGRAMRLDFSTPRQN 451
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW+V E L F+ +G + G R++ D +SGRSRG+G+V ++ + A E+
Sbjct: 267 LFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDAAKAFEAK 326
Query: 129 NGVELEGRAMRVSLAQGRRS 148
G EL+GR + + A R++
Sbjct: 327 KGAELDGRPLNLDYANARQN 346
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 88/150 (58%), Gaps = 13/150 (8%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP--------- 57
++ D+ETGR++GF +VT + + A + L G E GR +RV+ S PKP
Sbjct: 214 IITDKETGRAKGFGYVTFESADALTAAMA-LTGTELDGREIRVDVST-PKPPRDGNRQGR 271
Query: 58 -KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
+ P A T LF+GNLS++VT + + ++F +YG +V R D ++G +G+G+V Y
Sbjct: 272 KEAPQSAPTTT-LFLGNLSFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEYG 330
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ A+E LNGVE+ GR++R+ A GR
Sbjct: 331 DVETAQKAVEGLNGVEIAGRSLRLDYAGGR 360
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
Query: 52 SDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
+ KPK + P+ + +FVGNLSW+V E L F + G V AR++ D E+GR++G+G
Sbjct: 172 TKKPKTEEPVNST----VFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFG 227
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
+V + + A+ TA +L G EL+GR +RV ++
Sbjct: 228 YVTFES-ADALTAAMALTGTELDGREIRVDVS 258
>gi|45201486|ref|NP_987056.1| AGR390Cp [Ashbya gossypii ATCC 10895]
gi|44986420|gb|AAS54880.1| AGR390Cp [Ashbya gossypii ATCC 10895]
gi|374110307|gb|AEY99212.1| FAGR390Cp [Ashbya gossypii FDAG1]
Length = 378
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 86/147 (58%), Gaps = 4/147 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + VL D+ + +AFV D N + LDG++ ++++N++ + + +
Sbjct: 61 IANVKVLVDKNNEEAN-YAFVEYRQPRDANVAFQTLDGKQIENNVIKINWAFQSQQ---V 116
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
++ F LFVG+L+ V E+L+ F+E+ + A V++D +SGRSRGYGFV + + E
Sbjct: 117 SSDDTFNLFVGDLNVDVDDETLSSTFKEFPTFIQAHVMWDMQSGRSRGYGFVSFGEQEEA 176
Query: 122 ETALESLNGVELEGRAMRVSLAQGRRS 148
+ A+++ G L GRA+RV+ A R S
Sbjct: 177 QKAMDAKQGFNLNGRAIRVNWAAKRES 203
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+D L+VGNL ++ +L Q FQ G + +VL D ++ Y FV Y + A
Sbjct: 33 SDRILYVGNLDKTINEATLKQYFQVGGPIANVKVLVD-KNNEEANYAFVEYRQPRDANVA 91
Query: 125 LESLNGVELEGRAMRVSLA 143
++L+G ++E ++++ A
Sbjct: 92 FQTLDGKQIENNVIKINWA 110
>gi|363814334|ref|NP_001242808.1| uncharacterized protein LOC100793319 [Glycine max]
gi|255639879|gb|ACU20232.1| unknown [Glycine max]
Length = 289
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 8/141 (5%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA-------ETD 66
GRS+G+AFVTM++ E+ A ++ D E GRI+RV + + K ET
Sbjct: 117 GRSKGYAFVTMASGEEAQAAVDKFDSYELSGRIIRVELAKRFKKPPSPPPPPGPRPGETR 176
Query: 67 FKLFVGNLSWSVTTESLTQAFQE-YGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
++ NL+W + L Q F E + ARV++D SGRS GYGFV + TK + E A+
Sbjct: 177 HVIYASNLAWKARSTHLRQLFAENFKTPSSARVVFDSPSGRSAGYGFVSFLTKEDAEAAI 236
Query: 126 ESLNGVELEGRAMRVSLAQGR 146
+++G EL GR +R+ ++ +
Sbjct: 237 STVDGKELMGRPLRLKFSEKK 257
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P+L + KL+V NLSWS+T + F + G V ++ + GRS+GY FV +
Sbjct: 70 PELTQPTDNVKKLYVVNLSWSLTAADINDLFAQSGTVTDVEIIK-SKDGRSKGYAFVTMA 128
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E + A++ + EL GR +RV LA+
Sbjct: 129 SGEEAQAAVDKFDSYELSGRIIRVELAK 156
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 3 SKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
S V++D +GRS G+ FV+ T ED A I +DG+E +GR LR+ FS+K
Sbjct: 205 SSARVVFDSPSGRSAGYGFVSFLTKEDAEAAISTVDGKELMGRPLRLKFSEK 256
>gi|326491331|dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 59 LPLYAETD-FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
LP+ A+ D ++ FVGNLSWS T ESL AF +YG V A+V+ D SGRSRG+ FV +
Sbjct: 34 LPVMADEDEYRCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDE 93
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQ 144
K ME A+E +NG++LEGRA+ V AQ
Sbjct: 94 KKAMEEAIEDMNGLDLEGRAITVDKAQ 120
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
+++ V+ D+ +GRSRGFAFVT + IE+++G + GR + V DK +P+
Sbjct: 69 VTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIEDMNGLDLEGRAITV---DKAQPQ 122
>gi|407918628|gb|EKG11897.1| hypothetical protein MPH_10939 [Macrophomina phaseolina MS6]
Length = 519
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 14/154 (9%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-DKPKPKLP----- 60
++ DR TGRS+GF +V TVE A + G + R L ++FS +P+ + P
Sbjct: 297 IVTDRATGRSKGFGYVEFETVEAATAALNAKKGTDLDNRPLNLDFSTPRPEGQNPRDRAS 356
Query: 61 --------LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
+ + LFVGNLS+ T +S+T+ FQEYG + + E G +G+G+
Sbjct: 357 SRASQHGDVPSRPSDTLFVGNLSFDATPDSVTEIFQEYGTITRVSLPTKPEDGMPKGFGY 416
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
V +S+ E + A E+L G EL GR+MR+ A R
Sbjct: 417 VGFSSVEEAQGAFEALQGAELNGRSMRLDFAAPR 450
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW+V E L + F+E+G R++ D +GRS+G+G+V + T AL +
Sbjct: 269 LFVGNLSWNVDEEWLGREFEEFGPKA-VRIVTDRATGRSKGFGYVEFETVEAATAALNAK 327
Query: 129 NGVELEGRAMRVSLAQGR 146
G +L+ R + + + R
Sbjct: 328 KGTDLDNRPLNLDFSTPR 345
>gi|50308683|ref|XP_454345.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643480|emb|CAG99432.1| KLLA0E08779p [Kluyveromyces lactis]
Length = 475
Score = 95.9 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 47/145 (32%), Positives = 88/145 (60%), Gaps = 4/145 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S + ++ D+ + + +AFV D N + L+G+E G++L++N++ + + +
Sbjct: 123 ISSVKIIPDKNS-QECNYAFVEYFEPHDANVAYQTLNGKEVEGKVLKINWAFQSQQ---V 178
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
++ F LFVG+L+ V +L F+E+ + + A V++D +SGRSRGYGFV + + +
Sbjct: 179 NSDETFNLFVGDLNVDVDDATLAGTFKEFPSFIQAHVMWDMQSGRSRGYGFVSFGEQDQA 238
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
+ A+E+ G EL GRA+R++ A R
Sbjct: 239 QVAMETKQGFELNGRALRINWASKR 263
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
++D L+VGNL S+ + L Q FQ G++ +++ D S + Y FV Y +
Sbjct: 94 KSDKILYVGNLPKSIDDDLLKQYFQIGGSISSVKIIPDKNS-QECNYAFVEYFEPHDANV 152
Query: 124 ALESLNGVELEGRAMRVSLA 143
A ++LNG E+EG+ ++++ A
Sbjct: 153 AYQTLNGKEVEGKVLKINWA 172
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V++D ++GRSRG+ FV+ + +E G E GR LR+N++ K +P+
Sbjct: 215 VMWDMQSGRSRGYGFVSFGEQDQAQVAMETKQGFELNGRALRINWASKREPQ 266
>gi|356531425|ref|XP_003534278.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 282
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 80/142 (56%), Gaps = 8/142 (5%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA-------ETD 66
GRS+G+AFVTM++ E+ A ++ D E GRI+RV + + K L ET
Sbjct: 110 GRSKGYAFVTMASGEEAQAAVDKFDSYELSGRIIRVELAKRLKKPPSLPPPPGPRPGETR 169
Query: 67 FKLFVGNLSWSVTTESLTQAFQE-YGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
++ NL+W + L Q F E + ARV++D SGRS GYGFV + T+ + E A+
Sbjct: 170 HVIYASNLAWKARSTHLRQVFTENFKTPSSARVVFDSPSGRSAGYGFVSFLTREDAEAAI 229
Query: 126 ESLNGVELEGRAMRVSLAQGRR 147
+++G EL GR +R+ ++ +
Sbjct: 230 STVDGKELMGRPLRLKFSEKNK 251
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+V NLSWS+T +T F + G V ++ + GRS+GY FV ++ E + A++
Sbjct: 74 KLYVVNLSWSLTAADITDLFAQCGTVTDVEII-KSKDGRSKGYAFVTMASGEEAQAAVDK 132
Query: 128 LNGVELEGRAMRVSLAQ 144
+ EL GR +RV LA+
Sbjct: 133 FDSYELSGRIIRVELAK 149
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK 56
V++D +GRS G+ FV+ T ED A I +DG+E +GR LR+ FS+K K
Sbjct: 202 VVFDSPSGRSAGYGFVSFLTREDAEAAISTVDGKELMGRPLRLKFSEKNK 251
>gi|367000405|ref|XP_003684938.1| hypothetical protein TPHA_0C03520 [Tetrapisispora phaffii CBS 4417]
gi|357523235|emb|CCE62504.1| hypothetical protein TPHA_0C03520 [Tetrapisispora phaffii CBS 4417]
Length = 442
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 87/147 (59%), Gaps = 4/147 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S + V+ D+ S +AFV D + +NL+G+ ++L++N++ + +
Sbjct: 105 ISNVKVINDK--NNSVNYAFVEYLQHHDADVAFKNLNGKTIETKVLKINWAFQSQQTT-- 160
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
E+ F LFVG+L+ V E+L AF E+ + V A V++D ++GRSRGYGF+ +S + +
Sbjct: 161 SDESLFNLFVGDLNVDVDDETLGHAFSEFPSFVQAHVMWDMQTGRSRGYGFISFSNQEDA 220
Query: 122 ETALESLNGVELEGRAMRVSLAQGRRS 148
+TA++ + EL GR +R++ A R +
Sbjct: 221 QTAMDKMQSTELNGRQIRINWASKREN 247
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+D L+VGNL S+ E+L Q FQ G + +V+ D S Y FV Y + + A
Sbjct: 77 SDKILYVGNLDKSINEETLKQYFQIGGPISNVKVIND--KNNSVNYAFVEYLQHHDADVA 134
Query: 125 LESLNGVELEGRAMRVSLA 143
++LNG +E + ++++ A
Sbjct: 135 FKNLNGKTIETKVLKINWA 153
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 84/150 (56%), Gaps = 11/150 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS---DKP---KPKLP 60
V DR TG+SRGF +VT +TVE +A I +G+E GR + ++ S DK + +
Sbjct: 75 VQMDRNTGKSRGFGYVTFATVEAVDAAIAQ-NGKEIDGRAVNIDKSIEKDKGAVRQKRAE 133
Query: 61 LY----AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
Y +E LFVGNLSW T ++L + F EYG++ RV D E+G+ +G+ +V +S
Sbjct: 134 AYGDKASEPSSVLFVGNLSWDATEDTLWETFNEYGDIKSVRVPTDRETGKPKGFAYVEFS 193
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ A E G E+ GR +RV +Q R
Sbjct: 194 DIEASKKAFEGAAGAEVAGRNIRVDFSQPR 223
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG LSW+V + L Q F E G VV ARV D +G+SRG+G+V ++T ++ A+ +
Sbjct: 46 IFVGKLSWNVDNDWLAQEFAECGEVVSARVQMDRNTGKSRGFGYVTFATVEAVDAAI-AQ 104
Query: 129 NGVELEGRAMRV 140
NG E++GRA+ +
Sbjct: 105 NGKEIDGRAVNI 116
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
+ + V DRETG+ +GFA+V S +E E G E GR +RV+FS P P
Sbjct: 170 IKSVRVPTDRETGKPKGFAYVEFSDIEASKKAFEGAAGAEVAGRNIRVDFSQPRDPNGP 228
>gi|254576977|ref|XP_002494475.1| ZYRO0A02398p [Zygosaccharomyces rouxii]
gi|238937364|emb|CAR25542.1| ZYRO0A02398p [Zygosaccharomyces rouxii]
Length = 410
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 86/147 (58%), Gaps = 3/147 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S + V+ D+ R+ +AFV D N ++ L+G++ ++R+N++ + + LP
Sbjct: 82 ISNVKVMIDKNNARAN-YAFVEYFKSHDANIALQTLNGKQIENNVVRINWAFQSQQALP- 139
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
E + LFVG+LS V E+L AF+ + + + V++D ++G SRGYGFV + + +
Sbjct: 140 -DENTYNLFVGDLSVDVDDETLCNAFRSFPSFIQGHVMWDMQTGGSRGYGFVSFGDQEQA 198
Query: 122 ETALESLNGVELEGRAMRVSLAQGRRS 148
+ A++S+ EL GR +R++ A R +
Sbjct: 199 QLAMDSMQSQELNGRPLRINWASKREN 225
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+D L+VGNL S+T E L Q FQ G + +V+ D + R+ Y FV Y + A
Sbjct: 54 SDRVLYVGNLDKSITEEVLRQYFQVGGQISNVKVMIDKNNARAN-YAFVEYFKSHDANIA 112
Query: 125 LESLNGVELEGRAMRVSLA 143
L++LNG ++E +R++ A
Sbjct: 113 LQTLNGKQIENNVVRINWA 131
>gi|119195917|ref|XP_001248562.1| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
gi|392862234|gb|EAS37139.2| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
Length = 496
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 91/162 (56%), Gaps = 16/162 (9%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS--------- 52
LS + ++ DR++GRSRGF +V + ED + + E GR + ++F+
Sbjct: 288 LSGVRIVTDRDSGRSRGFGYVEFTNAEDASKAFKAKKDAEIDGRTINLDFANARQNAGGA 347
Query: 53 -DKPKPKLPLY-----AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR 106
D+ + + + E+D LF+GN+S++ ++ + F +G+++G R+ D ESGR
Sbjct: 348 RDRAQSRAKSFGDQTSPESD-TLFIGNISFNADENAVQETFSSHGSILGIRLPTDPESGR 406
Query: 107 SRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+G+G+V +S+ E +A +L G EL GRAMR+ + R++
Sbjct: 407 PKGFGYVQFSSVDEARSAFNALQGTELAGRAMRLDFSTPRQN 448
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW+V E L F+ +G + G R++ D +SGRSRG+G+V ++ + A ++
Sbjct: 264 LFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDASKAFKAK 323
Query: 129 NGVELEGRAMRVSLAQGRRS 148
E++GR + + A R++
Sbjct: 324 KDAEIDGRTINLDFANARQN 343
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 91/154 (59%), Gaps = 17/154 (11%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP--------- 57
V++DR++ +SRGF +V + + IE DG E GR +RVN++ + KP
Sbjct: 227 VVFDRDSQKSRGFGYVEFADLGSSAKAIEK-DGSEIDGRAIRVNYATQRKPNEAAEKRAR 285
Query: 58 ----KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
K AET L++G+LS+SVT + + +AF ++G+V R+ D ++G +G+G+V
Sbjct: 286 VFNDKQSPPAET---LWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYV 342
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSLAQGRR 147
+S+ + AL+++NG E+ GRA+RV A ++
Sbjct: 343 QFSSVDDATAALKAMNGAEIAGRAIRVDFAPPKQ 376
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG LSW+V + L F+ G VV ARV++D +S +SRG+G+V ++ A+E
Sbjct: 198 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLGSSAKAIEK- 256
Query: 129 NGVELEGRAMRVSLAQGRR 147
+G E++GRA+RV+ A R+
Sbjct: 257 DGSEIDGRAIRVNYATQRK 275
>gi|320583460|gb|EFW97673.1| nuclear localization sequence binding protein [Ogataea
parapolymorpha DL-1]
Length = 500
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 16/155 (10%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP------ 60
V+ +RETGRSRG+ +V + E +E GRE GR + ++ S KP+ P
Sbjct: 291 VMTERETGRSRGYGYVDFESKEQAQKALEQFQGREIEGRPINLDMSTS-KPQTPSQNQKF 349
Query: 61 -----LYAETDFK----LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
Y +T + LFVGNLS+ ++L + F+++G V+G R+ ES + +G+G
Sbjct: 350 QDRAKKYGDTPSQPSDTLFVGNLSFQADRDTLKEFFEQHGTVLGIRIPTHPESEQPKGFG 409
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+V + + E + ALE+LNG + GR +R+ + R
Sbjct: 410 YVQFGSVDEAKAALEALNGEYIAGRPVRLDFSAPR 444
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 50/75 (66%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVG L+W+V + L + FQ V+ ARV+ + E+GRSRGYG+V + +K + + ALE
Sbjct: 262 LFVGRLAWAVDDQRLLEEFQSLDGVLSARVMTERETGRSRGYGYVDFESKEQAQKALEQF 321
Query: 129 NGVELEGRAMRVSLA 143
G E+EGR + + ++
Sbjct: 322 QGREIEGRPINLDMS 336
>gi|300121030|emb|CBK21412.2| unnamed protein product [Blastocystis hominis]
Length = 296
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 85/155 (54%), Gaps = 13/155 (8%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
L L ++YDR TGR RGF FV+ ST + N +E +G GR +RV + K L
Sbjct: 29 LVTLQIVYDRNTGRPRGFGFVSFSTEDGLNKAMEQ-NGSLINGREIRVEVA---KGSLGK 84
Query: 62 YAET---------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
+E + K+FV +LSW+ T E L AF + G + ++L D ++GRSRG G
Sbjct: 85 NSENVRQNRNYNDENKVFVSSLSWNTTDEMLRDAFSQCGKIEHYKILTDRQTGRSRGMGI 144
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLAQGRR 147
V +ST+ EM A+ ++NG L+GR + V G R
Sbjct: 145 VKFSTREEMNNAISTMNGSTLDGRQIAVREFLGER 179
>gi|154288132|ref|XP_001544861.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408502|gb|EDN04043.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 500
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 92/161 (57%), Gaps = 15/161 (9%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-----KPK 56
L+ + ++ DR++GRSRGF +V + D E GR L V+F++ PK
Sbjct: 285 LAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAKKDAELDGRKLNVDFANGRSNAAPK 344
Query: 57 PKLPLYA---------ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS 107
+ A E+D LF+GN+++S +++AF E+G+++G R+ D ESGR
Sbjct: 345 ERAQSRAQNFGDQTSPESDT-LFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRP 403
Query: 108 RGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+G+G+V +S+ E +A ++LNG +L GR+MR+ + R++
Sbjct: 404 KGFGYVQFSSVDEARSAFQALNGADLGGRSMRLDFSSPRQN 444
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LF+GNLSW+V E L F+E+G + G R++ D +SGRSRG+G+V ++ A+ A +
Sbjct: 261 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAK 320
Query: 129 NGVELEGRAMRVSLAQGR 146
EL+GR + V A GR
Sbjct: 321 KDAELDGRKLNVDFANGR 338
>gi|225560173|gb|EEH08455.1| ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 470
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 92/161 (57%), Gaps = 15/161 (9%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-----KPK 56
L+ + ++ DR++GRSRGF +V + D E GR L V+F++ PK
Sbjct: 255 LAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAKKDAELDGRKLNVDFANGRSNAAPK 314
Query: 57 PKLPLYA---------ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS 107
+ A E+D LF+GN+++S +++AF E+G+++G R+ D ESGR
Sbjct: 315 ERAQSRAQNFGDQTSPESD-TLFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRP 373
Query: 108 RGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+G+G+V +S+ E +A ++LNG +L GR+MR+ + R++
Sbjct: 374 KGFGYVQFSSVDEARSAFQALNGADLGGRSMRLDFSSPRQN 414
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LF+GNLSW+V E L F+E+G + G R++ D +SGRSRG+G+V ++ A+ A +
Sbjct: 231 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAK 290
Query: 129 NGVELEGRAMRVSLAQGR 146
EL+GR + V A GR
Sbjct: 291 KDAELDGRKLNVDFANGR 308
>gi|240278920|gb|EER42426.1| ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325090181|gb|EGC43491.1| ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 472
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 92/161 (57%), Gaps = 15/161 (9%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-----KPK 56
L+ + ++ DR++GRSRGF +V + D E GR L V+F++ PK
Sbjct: 257 LAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAKKDAELDGRKLNVDFANGRSNAAPK 316
Query: 57 PKLPLYA---------ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS 107
+ A E+D LF+GN+++S +++AF E+G+++G R+ D ESGR
Sbjct: 317 ERAQSRAQNFGDQTSPESD-TLFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRP 375
Query: 108 RGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+G+G+V +S+ E +A ++LNG +L GR+MR+ + R++
Sbjct: 376 KGFGYVQFSSVDEARSAFQALNGADLGGRSMRLDFSSPRQN 416
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LF+GNLSW+V E L F+E+G + G R++ D +SGRSRG+G+V ++ A+ A +
Sbjct: 233 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAK 292
Query: 129 NGVELEGRAMRVSLAQGR 146
EL+GR + V A GR
Sbjct: 293 KDAELDGRKLNVDFANGR 310
>gi|296422065|ref|XP_002840583.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636802|emb|CAZ84774.1| unnamed protein product [Tuber melanosporum]
Length = 559
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP- 60
++ + V+ DRE+GRS+GF +V +T E +E + G++ GR + V+FS P+P+ P
Sbjct: 328 IAAVRVVTDRESGRSKGFGYVEYTTNEAAKKALEEMKGKDIDGRTINVDFS-APRPENPR 386
Query: 61 -----LYAETDFK----LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
LY + +FV NLS+ + + F+ +GN+VG R+ D ESG+ +G+
Sbjct: 387 QDRSRLYGDQKSPESETVFVANLSFEADEQIVQTEFEGFGNIVGLRIPTDPESGQPKGFC 446
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
++ Y A+E +NG + GRA+R + R
Sbjct: 447 YIQYDRVDSARKAVEEMNGALVAGRAIRTDFSTPR 481
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVG+LSW+V L F+++G + RV+ D ESGRS+G+G+V Y+T + ALE +
Sbjct: 304 LFVGSLSWNVDEGWLRNEFEQFGEIAAVRVVTDRESGRSKGFGYVEYTTNEAAKKALEEM 363
Query: 129 NGVELEGRAMRVSLAQGR 146
G +++GR + V + R
Sbjct: 364 KGKDIDGRTINVDFSAPR 381
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/152 (33%), Positives = 87/152 (57%), Gaps = 10/152 (6%)
Query: 4 KLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA 63
+ +V DR+TGRS+GF +V+ ST E I ++G+E GR + VN + PK P
Sbjct: 419 RASVQMDRQTGRSKGFGYVSFSTPEAAEKAIAEMNGKEIDGRAVNVN-AATPKTPNPAGR 477
Query: 64 ETDFK---------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
F LFVGN+S++ + L + F E+G++V R+ D E+G+ +G+G+V
Sbjct: 478 AKQFGDTVSAESKVLFVGNVSFNANEDMLWETFGEHGDIVSVRLPTDRETGQMKGFGYVE 537
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+++ ++A +LNG ++ GR +R+ +Q R
Sbjct: 538 FTSVENAKSAFNALNGKDIAGRNIRLDFSQPR 569
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
++ + +FVG LSW+V E L F+ G VV A V D ++GRS+G+G+V +ST E
Sbjct: 387 SDANCNIFVGKLSWNVDDEWLKSEFEACGEVVRASVQMDRQTGRSKGFGYVSFSTPEAAE 446
Query: 123 TALESLNGVELEGRAMRVSLA 143
A+ +NG E++GRA+ V+ A
Sbjct: 447 KAIAEMNGKEIDGRAVNVNAA 467
>gi|326505708|dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 58/84 (69%)
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ E +++ FVGNLSWS T ESL AF +YG V A+V+ D SGRSRG+ FV + K
Sbjct: 1 MADEDEYRCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKA 60
Query: 121 METALESLNGVELEGRAMRVSLAQ 144
ME A+E +NG++LEGRA+ V AQ
Sbjct: 61 MEEAIEDMNGLDLEGRAITVDKAQ 84
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
+++ V+ D+ +GRSRGFAFVT + IE+++G + GR + V DK +P+
Sbjct: 33 VTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIEDMNGLDLEGRAITV---DKAQPQ 86
>gi|115456445|ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|40714682|gb|AAR88588.1| putative RNA binding protein [Oryza sativa Japonica Group]
gi|108711961|gb|ABF99756.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711962|gb|ABF99757.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711963|gb|ABF99758.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711964|gb|ABF99759.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550294|dbj|BAF13737.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|125546344|gb|EAY92483.1| hypothetical protein OsI_14220 [Oryza sativa Indica Group]
gi|125588547|gb|EAZ29211.1| hypothetical protein OsJ_13272 [Oryza sativa Japonica Group]
gi|215695067|dbj|BAG90258.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715212|dbj|BAG94963.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764998|dbj|BAG86695.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 205
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 59/79 (74%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+++ F+GNLSWS T ESL AF ++GN+ A+V++D SGRSRG+GFV + K ME A+
Sbjct: 6 EYRCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKAMEDAI 65
Query: 126 ESLNGVELEGRAMRVSLAQ 144
E +NG++L+GRA+ V AQ
Sbjct: 66 EGMNGLDLDGRAITVDKAQ 84
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
L++ V++D+ +GRSRGF FVT + IE ++G + GR + V DK +P+ P
Sbjct: 33 LTEAKVVFDKYSGRSRGFGFVTFDEKKAMEDAIEGMNGLDLDGRAITV---DKAQPQGP 88
>gi|367043706|ref|XP_003652233.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
gi|346999495|gb|AEO65897.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
Length = 533
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 16/155 (10%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK-LP----- 60
V+ D+++GRSRGF +V T E + +G GR +R++F+ KP P
Sbjct: 319 VVTDKDSGRSRGFGYVDFETPEAAEKAYNDKNGAFLQGREMRLDFAAKPSADSTPNARAA 378
Query: 61 ---------LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
+ E+D LFVGNLS+S ES++ F + V R+ D ESGR +G+
Sbjct: 379 ERARKHGDVISPESDT-LFVGNLSFSANEESVSAFFNKVAKVQSLRIPTDQESGRPKGFA 437
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+V +S+ + + A E+LNG +L+GR +R+ A+ R
Sbjct: 438 YVTFSSVDDAKAAFEALNGSDLDGRPVRLDFAKPR 472
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 45/75 (60%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNL W V +L + FQ V GARV+ D +SGRSRG+G+V + T E A
Sbjct: 290 LFVGNLGWGVDDNALYEEFQNNEGVTGARVVTDKDSGRSRGFGYVDFETPEAAEKAYNDK 349
Query: 129 NGVELEGRAMRVSLA 143
NG L+GR MR+ A
Sbjct: 350 NGAFLQGREMRLDFA 364
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK 56
L + D+E+GR +GFA+VT S+V+D A E L+G + GR +R++F+ KP+
Sbjct: 422 LRIPTDQESGRPKGFAYVTFSSVDDAKAAFEALNGSDLDGRPVRLDFA-KPR 472
>gi|255718453|ref|XP_002555507.1| KLTH0G10912p [Lachancea thermotolerans]
gi|238936891|emb|CAR25070.1| KLTH0G10912p [Lachancea thermotolerans CBS 6340]
Length = 436
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 82/145 (56%), Gaps = 4/145 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + +L D+ + +AFV D N + LDG++ ++++N++ + +
Sbjct: 93 IANVKILMDK-NNKQANYAFVEFHQPHDANVAFQTLDGKQIENHVIKINWAFQ---SQQV 148
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
+E F LFVG+L+ V E+L + F++ + A V++D ++GRSRGYGFV + + +
Sbjct: 149 SSEDTFNLFVGDLNVDVDDETLARTFKDIPTFIQAHVMWDMQTGRSRGYGFVSFGEQTQA 208
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
+ A+E G + GRA+R++ A R
Sbjct: 209 QKAMEDNQGAVVNGRAIRINWASKR 233
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+D L+VGNL +VT E L Q FQ G++ ++L D ++ + Y FV + + A
Sbjct: 65 SDRILYVGNLDLAVTEEMLKQYFQVGGSIANVKILMD-KNNKQANYAFVEFHQPHDANVA 123
Query: 125 LESLNGVELEGRAMRVSLA 143
++L+G ++E ++++ A
Sbjct: 124 FQTLDGKQIENHVIKINWA 142
>gi|328858559|gb|EGG07671.1| hypothetical protein MELLADRAFT_71659 [Melampsora larici-populina
98AG31]
Length = 163
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 58/76 (76%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNL+WS T SLTQAF +YG VV A V+ D E+GRSRG+GF+ +S + + + A+++
Sbjct: 6 KLFVGNLAWSTDTNSLTQAFNQYGEVVDAIVMQDRETGRSRGFGFITFSNQDQAQAAIDA 65
Query: 128 LNGVELEGRAMRVSLA 143
LN +++GR +RV+ A
Sbjct: 66 LNEADVDGRNIRVNFA 81
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
V+ DRETGRSRGF F+T S + A I+ L+ + GR +RVNF+
Sbjct: 36 VMQDRETGRSRGFGFITFSNQDQAQAAIDALNEADVDGRNIRVNFA 81
>gi|357122439|ref|XP_003562923.1| PREDICTED: uncharacterized protein LOC100844345 [Brachypodium
distachyon]
Length = 206
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 58/78 (74%)
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
++ F+GNLSWS T ESL AF+++GNV A+V+ D SGRSRG+ FV + K +ME A+E
Sbjct: 7 YRCFIGNLSWSTTDESLKDAFRKFGNVTEAKVVLDKFSGRSRGFAFVTFDEKKDMEAAIE 66
Query: 127 SLNGVELEGRAMRVSLAQ 144
+NG++L+GRA+ V AQ
Sbjct: 67 DMNGLDLDGRAITVDKAQ 84
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
+++ V+ D+ +GRSRGFAFVT +D A IE+++G + GR + V DK +P+
Sbjct: 33 VTEAKVVLDKFSGRSRGFAFVTFDEKKDMEAAIEDMNGLDLDGRAITV---DKAQPQ 86
>gi|363808212|ref|NP_001241976.1| uncharacterized protein LOC100803098 [Glycine max]
gi|255639493|gb|ACU20041.1| unknown [Glycine max]
Length = 191
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 79/151 (52%), Gaps = 13/151 (8%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK--PK--- 56
+S V ETG SRG A+VTM+++ I LD ++ GR +RV FS + PK
Sbjct: 34 ISLFQVCRSAETGESRGSAYVTMASINSARKAIAALDASDFGGREVRVRFSAEMNPKRRN 93
Query: 57 -------PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
PK +Y E KL+VGNLS S + L Q F +G V RVL D G R
Sbjct: 94 LETMNSSPKRVIYYEGPHKLYVGNLSRSAGPQDLKQLFGRFGIVASVRVLQDLRKGNRRV 153
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMRV 140
Y FV Y +++E + A+ SLNG E GR + +
Sbjct: 154 YAFVSYHSESERDAAM-SLNGTEFFGRVLVI 183
>gi|226533248|ref|NP_001149356.1| plastid-specific 30S ribosomal protein 2 [Zea mays]
gi|195626620|gb|ACG35140.1| plastid-specific 30S ribosomal protein 2 [Zea mays]
gi|414884785|tpg|DAA60799.1| TPA: plastid-specific 30S ribosomal protein 2 [Zea mays]
Length = 251
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 85/133 (63%), Gaps = 10/133 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK---------PKP 57
V+YD+ T RSR F FVTMST E+ NA +E L+G E R ++VN ++ P+P
Sbjct: 100 VMYDKYTNRSRRFGFVTMSTAEEANAAVEALNGTEVGDRKIKVNVTESFLPNIDRSAPEP 159
Query: 58 KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
+ L+ ++ +K++VGNL+ +VTTE L F E GN++ A V + + +S+GYGFV +S+
Sbjct: 160 EA-LFVDSQYKVYVGNLAKTVTTEVLKNFFSEKGNILSATVSHIPGTSKSKGYGFVTFSS 218
Query: 118 KAEMETALESLNG 130
+ E+E A+ + N
Sbjct: 219 EEEVEAAVATFNN 231
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGN+ +VT + L F +G V A V+YD + RSR +GFV ST E A+E+
Sbjct: 70 KLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTAEEANAAVEA 129
Query: 128 LNGVELEGRAMRVSLAQG 145
LNG E+ R ++V++ +
Sbjct: 130 LNGTEVGDRKIKVNVTES 147
>gi|224035665|gb|ACN36908.1| unknown [Zea mays]
Length = 251
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 85/133 (63%), Gaps = 10/133 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK---------PKP 57
V+YD+ T RSR F FVTMST E+ NA +E L+G E R ++VN ++ P+P
Sbjct: 100 VMYDKYTNRSRRFGFVTMSTAEEANAAVEALNGTEVGDRKIKVNVTESFLPNIDRSAPEP 159
Query: 58 KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
+ L+ ++ +K++VGNL+ +VTTE L F E GN++ A V + + +S+GYGFV +S+
Sbjct: 160 EA-LFVDSQYKVYVGNLAKTVTTEVLKNFFSEKGNILSATVSHIPGTSKSKGYGFVTFSS 218
Query: 118 KAEMETALESLNG 130
+ E+E A+ + N
Sbjct: 219 EEEVEAAVATFNN 231
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGN+ +VT + L F +G V A V+YD + RSR +GFV ST E A+E+
Sbjct: 70 KLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTAEEANAAVEA 129
Query: 128 LNGVELEGRAMRVSLAQG 145
LNG E+ R ++V++ +
Sbjct: 130 LNGTEVGDRKIKVNVTES 147
>gi|444316792|ref|XP_004179053.1| hypothetical protein TBLA_0B07170 [Tetrapisispora blattae CBS 6284]
gi|387512093|emb|CCH59534.1| hypothetical protein TBLA_0B07170 [Tetrapisispora blattae CBS 6284]
Length = 470
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 44/128 (34%), Positives = 79/128 (61%), Gaps = 3/128 (2%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+AFV D N ++ L+G+ +I+++N++ + + + F LF+G+L+ V
Sbjct: 125 YAFVEYLKHHDANVALQTLNGKHIEKKIVKINWAFQSQQS---SNDDTFNLFIGDLNIDV 181
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
ESLT AF+++ + V A V++D ++GRSRGYGF +ST+ + + A++ + G EL GR +
Sbjct: 182 NDESLTAAFKDFPSFVQAHVMWDMQTGRSRGYGFASFSTQNDAQLAMDQMQGKELNGRPI 241
Query: 139 RVSLAQGR 146
R++ A R
Sbjct: 242 RINWASKR 249
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
V++D +TGRSRG+ F + ST D ++ + G+E GR +R+N++ K
Sbjct: 201 VMWDMQTGRSRGYGFASFSTQNDAQLAMDQMQGKELNGRPIRINWASK 248
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+D L+VGNL S+ +SL Q FQ G + +++ D ++ + Y FV Y + A
Sbjct: 81 SDKILYVGNLDKSINEDSLKQYFQVGGPIANVKIIVD-KNNKYCNYAFVEYLKHHDANVA 139
Query: 125 LESLNGVELEGRAMRVSLA 143
L++LNG +E + ++++ A
Sbjct: 140 LQTLNGKHIEKKIVKINWA 158
>gi|388515725|gb|AFK45924.1| unknown [Lotus japonicus]
Length = 290
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 76/145 (52%), Gaps = 17/145 (11%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK----------------P 55
ETG SRG +V M ++ + I LDG + GR LRV FS +
Sbjct: 138 ETGESRGCGYVIMESINSAKSAIAALDGSDVGGRELRVKFSVEMSLERTDANANAGEMYA 197
Query: 56 KPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
PK Y E KL+VGNL+ V E L F +GNV+ RVL+D + G++R Y F+ +
Sbjct: 198 SPKRTFYYEAPHKLYVGNLARVVKPEQLRNHFIRFGNVLSVRVLHDRKQGKARVYAFLSF 257
Query: 116 STKAEMETALESLNGVELEGRAMRV 140
++AE + A+ SLNG E GR + V
Sbjct: 258 ESEAERDAAM-SLNGTEFYGRTIVV 281
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+++V NL S L F+ YG ++ V + E+G SRG G+V + ++A+ +
Sbjct: 103 EIYVCNLPRSCNAAHLLDLFKPYGTIISVEVSRNAETGESRGCGYVIMESINSAKSAIAA 162
Query: 128 LNGVELEGRAMRVSLA 143
L+G ++ GR +RV +
Sbjct: 163 LDGSDVGGRELRVKFS 178
>gi|261351264|gb|ACX71299.1| RNA-binding protein RZ-1 [Capsicum annuum]
Length = 202
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 60/81 (74%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
E +++ F+GNLSWS + L AF+++GN+V A+V+ D SGRSRG+GFV + K ME
Sbjct: 4 EDEYRCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDDKRAMED 63
Query: 124 ALESLNGVELEGRAMRVSLAQ 144
A+E++NG++L+GRA+ V AQ
Sbjct: 64 AIEAMNGMDLDGRAITVDKAQ 84
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
L V+ D+ +GRSRGF FVT IE ++G + GR + V DK +P+
Sbjct: 33 LVDAKVVLDKFSGRSRGFGFVTFDDKRAMEDAIEAMNGMDLDGRAITV---DKAQPQ 86
>gi|223942613|gb|ACN25390.1| unknown [Zea mays]
Length = 164
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 85/133 (63%), Gaps = 10/133 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK---------PKP 57
V+YD+ T RSR F FVTMST E+ NA +E L+G E R ++VN ++ P+P
Sbjct: 13 VMYDKYTNRSRRFGFVTMSTAEEANAAVEALNGTEVGDRKIKVNVTESFLPNIDRSAPEP 72
Query: 58 KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
+ L+ ++ +K++VGNL+ +VTTE L F E GN++ A V + + +S+GYGFV +S+
Sbjct: 73 E-ALFVDSQYKVYVGNLAKTVTTEVLKNFFSEKGNILSATVSHIPGTSKSKGYGFVTFSS 131
Query: 118 KAEMETALESLNG 130
+ E+E A+ + N
Sbjct: 132 EEEVEAAVATFNN 144
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 87 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
F +G V A V+YD + RSR +GFV ST E A+E+LNG E+ R ++V++ +
Sbjct: 2 FAAHGTVERAEVMYDKYTNRSRRFGFVTMSTAEEANAAVEALNGTEVGDRKIKVNVTE 59
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 62/86 (72%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AET+++ FVG L+W+ +L QAF +YG ++ A+++ D E+GRSRG+GFV + ++ M
Sbjct: 2 AETEYRCFVGGLAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMR 61
Query: 123 TALESLNGVELEGRAMRVSLAQGRRS 148
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 62 QAIEEMNGKELDGRNITVNEAQSRRS 87
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + E IE ++G+E GR + VN
Sbjct: 37 IINDRETGRSRGFGFVTFGSEESMRQAIEEMNGKELDGRNITVN 80
>gi|1395193|dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvestris]
gi|1435062|dbj|BAA06012.1| RNA binding protein RZ-1 [Nicotiana sylvestris]
Length = 209
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 60/82 (73%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ F+GNLSWS + L AF+++GN+V A+V+ D SGRSRG+GFV + K ME
Sbjct: 2 ADDEYRCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDEKRAME 61
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E++NGV+L+GR + V AQ
Sbjct: 62 DAIEAMNGVDLDGRDITVDKAQ 83
>gi|397576490|gb|EJK50286.1| hypothetical protein THAOC_30767 [Thalassiosira oceanica]
Length = 397
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 81/141 (57%), Gaps = 7/141 (4%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA- 63
L V YD G +RGF F+ MS ED IE ++G E+ GR L VN S PK + P A
Sbjct: 227 LPVDYD---GNARGFGFIQMSD-EDSLKAIEGMNGVEFDGRTLNVNKS-LPKGQRPAAAA 281
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ KL+VGNLSW +L + F EYG+V+ + D E+G+ RG+ FV +
Sbjct: 282 PKETKLYVGNLSWGTEEGALRELFGEYGSVIDCYIPTDRETGQHRGFAFVTMGPDDALRA 341
Query: 124 ALESLNGVELEGRAMRVSLAQ 144
A E+ +G EL+GR +RV+ AQ
Sbjct: 342 ADET-DGYELDGRILRVNEAQ 361
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 89/156 (57%), Gaps = 18/156 (11%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA- 63
+ V RETG+ RGFAFV M+ +D A IE L+ E GR + V+ S PK ++
Sbjct: 126 VDVPLSRETGKCRGFAFVAMTNSDDHEAAIEQLNMSEIAGRTIYVSES-LPKDQVAEKKK 184
Query: 64 --------ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA--RVLYDGESGRSRGYGFV 113
+ K++VGNL++ T E L AF+E+G+V+ V YD G +RG+GF+
Sbjct: 185 KFQGRKKRDEGAKIYVGNLNFDTTAEDLKAAFEEFGDVMDCFLPVDYD---GNARGFGFI 241
Query: 114 CYSTKAEMETALESLNGVELEGRAMRV--SLAQGRR 147
S + ++ A+E +NGVE +GR + V SL +G+R
Sbjct: 242 QMSDEDSLK-AIEGMNGVEFDGRTLNVNKSLPKGQR 276
>gi|388521331|gb|AFK48727.1| unknown [Lotus japonicus]
Length = 285
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 81/140 (57%), Gaps = 7/140 (5%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA------ETDF 67
GR +G+AFVTM++ E+ A ++ D E GRILRV + + K P E
Sbjct: 123 GRGKGYAFVTMASGEEAQAAVDKFDTLELSGRILRVELAKRFKKPSPPGPPSPPPSEARH 182
Query: 68 KLFVGNLSWSVTTESLTQAFQE-YGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
++ NL+W V + L + F E + + AR+++D SG++ GYGF+ Y TK E E A+
Sbjct: 183 VIYASNLAWKVRSTHLREFFTENFKAPLSARIVFDTPSGKTTGYGFISYLTKEEAEAAIS 242
Query: 127 SLNGVELEGRAMRVSLAQGR 146
+L+G EL GR++ + +++ +
Sbjct: 243 ALDGKELMGRSLFLKISEKK 262
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+V NL WS++ + F + G V ++ G+ GR +GY FV ++ E + A++
Sbjct: 87 KLYVFNLPWSMSAADIKDLFGQCGTVTDVEIIR-GKDGRGKGYAFVTMASGEEAQAAVDK 145
Query: 128 LNGVELEGRAMRVSLAQ 144
+ +EL GR +RV LA+
Sbjct: 146 FDTLELSGRILRVELAK 162
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
+++D +G++ G+ F++ T E+ A I LDG+E +GR L + S+K
Sbjct: 214 IVFDTPSGKTTGYGFISYLTKEEAEAAISALDGKELMGRSLFLKISEK 261
>gi|239608318|gb|EEQ85305.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ER-3]
gi|327349518|gb|EGE78375.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ATCC 18188]
Length = 512
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 87/161 (54%), Gaps = 15/161 (9%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP- 60
LS + ++ DR++GRSRGF +V D E GR L ++F++ P
Sbjct: 287 LSGVRIVTDRDSGRSRGFGYVEFVNAADAAKAHAAKKDVELDGRKLNIDFANARSNAAPR 346
Query: 61 -------------LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS 107
E+D LF+GN+S+S +++AF E+G+++G R+ D ESGR
Sbjct: 347 ERAQSRAQNFGDQASPESD-TLFIGNISFSADENMISEAFSEHGSILGVRLPTDPESGRP 405
Query: 108 RGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+G+G+V +S+ E +A ++LNG +L GR MR+ + R++
Sbjct: 406 KGFGYVQFSSVDEARSAFQTLNGADLGGRPMRLDFSTPRQN 446
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW+V E L F+E+G + G R++ D +SGRSRG+G+V + A+ A +
Sbjct: 263 LFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTDRDSGRSRGFGYVEFVNAADAAKAHAAK 322
Query: 129 NGVELEGRAMRVSLAQGR 146
VEL+GR + + A R
Sbjct: 323 KDVELDGRKLNIDFANAR 340
>gi|326497679|dbj|BAK05929.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 81/152 (53%), Gaps = 16/152 (10%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF--------------S 52
V D ETG SRG FVTM ++ + I LDG + GR + V S
Sbjct: 159 VSRDAETGISRGCGFVTMRSLAEARTAINALDGFDLDGREMFVKLAAHVIASRRNPGGLS 218
Query: 53 DKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
P K ++ E+ +K++VGNL+WSV + L + F + G VV R+L D + GRSR YGF
Sbjct: 219 HTPPMKDHIF-ESRYKIYVGNLAWSVQPQHLREHFTKCGTVVSTRLLTDRKGGRSRVYGF 277
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+ +S+ E+E AL+ LN E GR + V A
Sbjct: 278 LSFSSAEELEAALQ-LNNTEFHGRDIIVREAH 308
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 54 KPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
+P+P+ +LFV NL + L + F YG V+ V D E+G SRG GFV
Sbjct: 124 RPRPR---------ELFVCNLPRRCGVDELLELFGPYGTVLSVEVSRDAETGISRGCGFV 174
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSLA 143
+ AE TA+ +L+G +L+GR M V LA
Sbjct: 175 TMRSLAEARTAINALDGFDLDGREMFVKLA 204
>gi|344231201|gb|EGV63083.1| hypothetical protein CANTEDRAFT_106956 [Candida tenuis ATCC 10573]
Length = 231
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 85/152 (55%), Gaps = 14/152 (9%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP------ 60
V+ +R TG+SRG+ +V + D +++ G+E GR + ++ S KP+ P
Sbjct: 34 VIMERATGKSRGYGYVDFESKADAEKALQDFQGKEIDGRPINLDLSTS-KPQTPAKNDRA 92
Query: 61 ------LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
+ A +D LF+GNLS++ T + L +AF +YG V+ R+ ++ + +G+G+V
Sbjct: 93 KKFGDVVSAPSD-TLFIGNLSFNATRDKLFEAFGQYGEVISCRIPTHPDTQQPKGFGYVQ 151
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
Y + E + ALE+LNG +EGR R+ + R
Sbjct: 152 YGSIEEAKAALEALNGEYIEGRPCRLDYSTPR 183
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 51/75 (68%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVG LSW++ + L + F+ G V+ ARV+ + +G+SRGYG+V + +KA+ E AL+
Sbjct: 5 LFVGRLSWNIDDDWLKREFEPSGGVISARVIMERATGKSRGYGYVDFESKADAEKALQDF 64
Query: 129 NGVELEGRAMRVSLA 143
G E++GR + + L+
Sbjct: 65 QGKEIDGRPINLDLS 79
>gi|406700097|gb|EKD03282.1| hypothetical protein A1Q2_02392 [Trichosporon asahii var. asahii
CBS 8904]
Length = 387
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 86/157 (54%), Gaps = 20/157 (12%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP--------- 57
++ DR+T RSRGF +V + V+ IE +G+E GR +RVNF++ KP
Sbjct: 235 IVLDRDTQRSRGFGYVEFADVDSAIKAIE-FEGKELDGRAVRVNFANARKPDADKRAKVF 293
Query: 58 --KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
K A+T L++G+L + T + + + F EYG+V R+ D E+G ++G+G+V +
Sbjct: 294 NDKRSPPADT---LWIGSLPFDTTEDHIYETFGEYGDVQSVRLPTDRETGAAKGFGYVTF 350
Query: 116 STKAEMETALESLNGVELEGRAMRVSLA-----QGRR 147
A+ ALE+LNG E R +R+ A GRR
Sbjct: 351 GDVAQATAALEALNGSEFGSRRIRIDFAPPKPDNGRR 387
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG LSW++ + L F G VV AR++ D ++ RSRG+G+V + A++++A++++
Sbjct: 206 VFVGGLSWNIDNDWLASEFASCGEVVSARIVLDRDTQRSRGFGYVEF---ADVDSAIKAI 262
Query: 129 --NGVELEGRAMRVSLAQGRR 147
G EL+GRA+RV+ A R+
Sbjct: 263 EFEGKELDGRAVRVNFANARK 283
>gi|172438|gb|AAA02808.1| RNA-binding protein [Saccharomyces cerevisiae]
Length = 429
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 89/145 (61%), Gaps = 4/145 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + ++ D+ ++ +AFV D N ++ L+G++ I+++N++ + +
Sbjct: 101 IANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQS--- 156
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
++ F LFVG+L+ +V E+L AF+++ + + V++D ++G SRGYGFV ++++ +
Sbjct: 157 SSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDA 216
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
+ A++S+ G +L GR +R++ A R
Sbjct: 217 QNAMDSMQGQDLNGRPLRINWAAKR 241
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+D L+VGNL ++T + L Q FQ G + +++ D ++ ++ Y FV Y + A
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIA 131
Query: 125 LESLNGVELEGRAMRVSLA 143
L++LNG ++E ++++ A
Sbjct: 132 LQTLNGKQIENNIVKINWA 150
>gi|295789540|pdb|3MD3|A Chain A, Crystal Structure Of The First Two Rrm Domains Of Yeast
Poly Binding Protein (Pub1)
Length = 166
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 88/142 (61%), Gaps = 4/142 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + ++ D+ ++ +AFV D N ++ L+G++ I+++N++ + +
Sbjct: 27 IANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQS--- 82
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
++ F LFVG+L+ +V E+L AF+++ + + V++D ++G SRGYGFV ++++ +
Sbjct: 83 SSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDA 142
Query: 122 ETALESLNGVELEGRAMRVSLA 143
+ A++S+ G +L GR +R++ A
Sbjct: 143 QNAMDSMQGQDLNGRPLRINWA 164
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNL ++T + L Q FQ G + +++ D ++ ++ Y FV Y + AL++L
Sbjct: 3 LYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIALQTL 61
Query: 129 NGVELEGRAMRVSLA 143
NG ++E ++++ A
Sbjct: 62 NGKQIENNIVKINWA 76
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 34/48 (70%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
V++D +TG SRG+ FV+ ++ +D ++++ G++ GR LR+N++ K
Sbjct: 119 VMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 166
>gi|261203287|ref|XP_002628857.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239586642|gb|EEQ69285.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
Length = 510
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 87/161 (54%), Gaps = 15/161 (9%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP- 60
LS + ++ DR++GRSRGF +V D E GR L ++F++ P
Sbjct: 285 LSGVRIVTDRDSGRSRGFGYVEFVDAADAAKAHAAKKDVELDGRKLNIDFANARSNAAPR 344
Query: 61 -------------LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS 107
E+D LF+GN+S+S +++AF E+G+++G R+ D ESGR
Sbjct: 345 ERAQSRAQNFGDQASPESD-TLFIGNISFSADENMISEAFSEHGSILGVRLPTDPESGRP 403
Query: 108 RGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+G+G+V +S+ E +A ++LNG +L GR MR+ + R++
Sbjct: 404 KGFGYVQFSSVDEARSAFQTLNGADLGGRPMRLDFSTPRQN 444
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW+V E L F+E+G + G R++ D +SGRSRG+G+V + A+ A +
Sbjct: 261 LFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTDRDSGRSRGFGYVEFVDAADAAKAHAAK 320
Query: 129 NGVELEGRAMRVSLAQGR 146
VEL+GR + + A R
Sbjct: 321 KDVELDGRKLNIDFANAR 338
>gi|323303187|gb|EGA56986.1| Pub1p [Saccharomyces cerevisiae FostersB]
Length = 433
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 89/145 (61%), Gaps = 4/145 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + ++ D+ ++ +AFV D N ++ L+G++ I+++N++ + +
Sbjct: 102 IANIKIMIDK-NNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQS--- 157
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
++ F LFVG+L+ +V E+L AF+++ + + V++D ++G SRGYGFV ++++ +
Sbjct: 158 SSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDA 217
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
+ A++S+ G +L GR +R++ A R
Sbjct: 218 QNAMDSMQGQDLNGRPLRINWAAKR 242
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+D L+VGNL ++T + L Q FQ G + +++ D ++ ++ Y FV Y + A
Sbjct: 74 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIA 132
Query: 125 LESLNGVELEGRAMRVSLA 143
L++LNG ++E ++++ A
Sbjct: 133 LQTLNGKQIENNIVKINWA 151
>gi|356508060|ref|XP_003522779.1| PREDICTED: 30 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 297
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD---FKLF 70
R+RG AFV M + E+ + NL+ E+ GR+++VN++ K K P + F LF
Sbjct: 108 NRNRGLAFVEMGSPEEALEALNNLESYEFEGRVIKVNYARPKKEKTPPPVKPKVVTFNLF 167
Query: 71 VGNLSWSVTTESLTQAFQE-YGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 129
V NLS+ + + L + F G VV A V+Y R GYGFV Y +K E E AL
Sbjct: 168 VANLSYEASAKDLKEFFDSGTGKVVSAEVVYRDNPRRPSGYGFVSYKSKKEAEAALAEFQ 227
Query: 130 GVELEGRAMRVSLAQGRR 147
G GR +RV +GRR
Sbjct: 228 GKIFMGRPIRVD--RGRR 243
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 60 PLYAETDF---KLFVGNLSWSVTTESLTQAFQEYGNVVGARV-LYDGESGRSRGYGFVCY 115
P+ AE +F +L N+ W+ T E + F+++G V+ + +Y + R+RG FV
Sbjct: 61 PVVAEEEFSRTRLLAQNVPWTSTPEDIRSLFEKHGKVLQVELSMY--KKNRNRGLAFVEM 118
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQGRR 147
+ E AL +L E EGR ++V+ A+ ++
Sbjct: 119 GSPEEALEALNNLESYEFEGRVIKVNYARPKK 150
>gi|366990603|ref|XP_003675069.1| hypothetical protein NCAS_0B06140 [Naumovozyma castellii CBS 4309]
gi|342300933|emb|CCC68698.1| hypothetical protein NCAS_0B06140 [Naumovozyma castellii CBS 4309]
Length = 443
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 88/145 (60%), Gaps = 3/145 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + ++ D++ + +AF+ D N ++ L+G + G+ +R+N++ + +
Sbjct: 109 ITDVKIMVDKK-NNNVNYAFIEYLKSHDANVALQTLNGIQIEGKTVRINWAFQSQQTT-- 165
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
++ F LFVG+L+ V E+L+ AF ++ + V A V++D ++GRSRGYGFV ++ + +
Sbjct: 166 NSDDTFNLFVGDLNVDVDDETLSHAFDQFPSYVQAHVMWDMQTGRSRGYGFVSFADQEQA 225
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
+ A+ + G+ + GRA+R++ A R
Sbjct: 226 QEAMNVMQGMPINGRAVRINWATKR 250
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+D L+VGNL S+ + L Q FQ G + +++ D + + Y F+ Y + A
Sbjct: 81 SDRVLYVGNLDKSINEDLLKQYFQVGGQITDVKIMVD-KKNNNVNYAFIEYLKSHDANVA 139
Query: 125 LESLNGVELEGRAMRVSLA 143
L++LNG+++EG+ +R++ A
Sbjct: 140 LQTLNGIQIEGKTVRINWA 158
>gi|448123237|ref|XP_004204643.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|448125519|ref|XP_004205201.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358249834|emb|CCE72900.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358350182|emb|CCE73461.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
Length = 505
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 11/151 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPKPKLPLY--- 62
V+Y++ +G+SRG+ +V T ++ GRE GR + ++ S+ KP+P P +
Sbjct: 322 VIYEKASGKSRGYGYVDFETKSQAQHALKEYQGREIDGRPINLDMSESKPRPSNPRFDRA 381
Query: 63 -------AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
+ LF+GNLS++ ++L F EYG VV R+ ++ + +G+G++ +
Sbjct: 382 KQFGDVPSAPSSTLFIGNLSFNAQRDNLYDIFGEYGRVVSCRMPTHPDTQQPKGFGYIEF 441
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQGR 146
ST E + ALE+LNG +EGR R+ + R
Sbjct: 442 STVDEAKAALEALNGEYVEGRPCRLDFSTPR 472
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 54/78 (69%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVG LSW++ E L + F+ G V GARV+Y+ SG+SRGYG+V + TK++ + AL+
Sbjct: 293 LFVGRLSWNIDDEWLQREFEPLGGVTGARVIYEKASGKSRGYGYVDFETKSQAQHALKEY 352
Query: 129 NGVELEGRAMRVSLAQGR 146
G E++GR + + +++ +
Sbjct: 353 QGREIDGRPINLDMSESK 370
>gi|156845624|ref|XP_001645702.1| hypothetical protein Kpol_1043p34 [Vanderwaltozyma polyspora DSM
70294]
gi|156116369|gb|EDO17844.1| hypothetical protein Kpol_1043p34 [Vanderwaltozyma polyspora DSM
70294]
Length = 442
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 86/145 (59%), Gaps = 4/145 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + V+ D+ +AFV S D + ++ L+G++ L++N++ + +
Sbjct: 103 ITNVKVINDK--NNEANYAFVEYSQHHDASIALKTLNGKQIENNTLKINWAFQSQQNT-- 158
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
++ F LF+G+L+ V E+L AF+++ + + A V++D ++GRSRGYGFV +S +
Sbjct: 159 TSDETFNLFIGDLNVDVDDETLVAAFKDFKSFIQAHVMWDMQTGRSRGYGFVSFSNLDDA 218
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
+ A++++ G EL GR +R++ A R
Sbjct: 219 QVAMDTMQGSELNGRQLRINWASKR 243
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+D L+VGNL S+ + L Q FQ G + +V+ D Y FV YS + A
Sbjct: 75 SDKILYVGNLDKSINEDILKQYFQVGGPITNVKVIND--KNNEANYAFVEYSQHHDASIA 132
Query: 125 LESLNGVELEGRAMRVSLA 143
L++LNG ++E ++++ A
Sbjct: 133 LKTLNGKQIENNTLKINWA 151
>gi|297843010|ref|XP_002889386.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335228|gb|EFH65645.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 298
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 80/144 (55%), Gaps = 14/144 (9%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS--------DKPK----- 56
+ +TG SRG +VTM ++ I +LDG E GR +RV +S P+
Sbjct: 147 NPQTGESRGSGYVTMGSINSAKIAIASLDGTEVGGREMRVRYSVDMNPGARRNPEVLNST 206
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
PK L E+ +K++VGNL W + L F ++G +V RVL+D ++G++R + F+ ++
Sbjct: 207 PKKILMYESQYKVYVGNLPWFTQPDGLRDHFSKFGTIVSTRVLHDRKTGKNRVFAFLSFT 266
Query: 117 TKAEMETALESLNGVELEGRAMRV 140
E + AL SLNG + EGR + V
Sbjct: 267 NSEERDAAL-SLNGTQYEGRRIIV 289
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
P+ +L+V N+ S L FQ +G V+ V + ++G SRG G+V +
Sbjct: 106 PVKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVTMGSIN 165
Query: 120 EMETALESLNGVELEGRAMRV 140
+ A+ SL+G E+ GR MRV
Sbjct: 166 SAKIAIASLDGTEVGGREMRV 186
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGR 45
VL+DR+TG++R FAF++ + E+ +A + +L+G +Y GR
Sbjct: 248 VLHDRKTGKNRVFAFLSFTNSEERDAAL-SLNGTQYEGR 285
>gi|303321732|ref|XP_003070860.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110557|gb|EER28715.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040347|gb|EFW22280.1| hypothetical protein CPSG_00179 [Coccidioides posadasii str.
Silveira]
Length = 498
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 91/162 (56%), Gaps = 16/162 (9%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS--------- 52
LS + ++ DR++GRSRGF +V + ED + + E GR + ++F+
Sbjct: 290 LSGVRIVTDRDSGRSRGFGYVEFTNAEDASKAFKAKKDAEIDGRTINLDFANARQNAGGA 349
Query: 53 -DKPKPKLPLYA-----ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR 106
D+ + + + E+D LF+GN+S++ ++ + F +G+++G R+ D ESGR
Sbjct: 350 RDRAQSRAKSFGDQTSPESD-TLFIGNISFNADENAVQETFSSHGSILGIRLPTDPESGR 408
Query: 107 SRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+G+G+V +S+ E +A +L G EL GRAMR+ + R++
Sbjct: 409 PKGFGYVQFSSVDEARSAFNALQGTELAGRAMRLDFSTPRQN 450
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 50/80 (62%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW+V E L F+ +G + G R++ D +SGRSRG+G+V ++ + A ++
Sbjct: 266 LFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDASKAFKAK 325
Query: 129 NGVELEGRAMRVSLAQGRRS 148
E++GR + + A R++
Sbjct: 326 KDAEIDGRTINLDFANARQN 345
>gi|326493798|dbj|BAJ85361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 62/86 (72%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AET+++ FVG L+W+ +L AF +YG ++ A+++ D E+GRSRG+GFV + ++ M
Sbjct: 2 AETEYRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMR 61
Query: 123 TALESLNGVELEGRAMRVSLAQGRRS 148
A+E +NG EL+GR++ V+ AQ RRS
Sbjct: 62 QAIEEMNGKELDGRSITVNEAQSRRS 87
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + E IE ++G+E GR + VN
Sbjct: 37 IINDRETGRSRGFGFVTFGSEESMRQAIEEMNGKELDGRSITVN 80
>gi|359481379|ref|XP_003632613.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 2 [Vitis
vinifera]
Length = 254
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 59/79 (74%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+++VGNLSW V +L F E G V ARV+YD E+GRSRG+GFV Y++ E+ A+ES
Sbjct: 171 RIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIES 230
Query: 128 LNGVELEGRAMRVSLAQGR 146
L+GV+L GR++RV++A+ R
Sbjct: 231 LDGVDLNGRSIRVTMAEAR 249
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPK 56
+++ V+YDRETGRSRGF FVT ++ E+ N IE+LDG + GR +RV ++ +P+
Sbjct: 196 VTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEARPR 251
>gi|147769276|emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]
Length = 294
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 7/138 (5%)
Query: 15 RSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD--KPKPKLPLYAE--TDFKLF 70
R+RG AF++M + E+ A + NL+ E GR ++VN+++ K KP P+ + T + LF
Sbjct: 127 RNRGLAFISMGSPEEALAALSNLESYELEGRAIKVNYANPQKKKPSSPIQHKPVTPYNLF 186
Query: 71 VGNLSWSVTTESLTQAFQEYG-NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 129
+ NL + + L + F NVV A V++ RS GYGFV + +K E +TAL S
Sbjct: 187 IANLPYQARAKDLREFFSSGNCNVVSAEVIFHENPRRSSGYGFVSFGSKEEADTALSSFQ 246
Query: 130 GVELEGRAMRVSLAQGRR 147
G GR +RV A+ RR
Sbjct: 247 GQMFMGRPLRV--ARSRR 262
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L N+ W+ T + + F++YG V+ + ++ R+RG F+ + E AL +
Sbjct: 90 RLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKT-RNRGLAFISMGSPEEALAALSN 148
Query: 128 LNGVELEGRAMRVSLAQGRR 147
L ELEGRA++V+ A ++
Sbjct: 149 LESYELEGRAIKVNYANPQK 168
>gi|299751777|ref|XP_001830476.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
gi|298409530|gb|EAU91356.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
Length = 142
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 59/79 (74%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSW+ T +SL QAF +YGNV+ + V+ D ++GRSRG+GFV YS E + A+ S
Sbjct: 4 KVYVGNLSWNTTDDSLRQAFSQYGNVLDSIVMRDRDTGRSRGFGFVTYSATEEADAAIAS 63
Query: 128 LNGVELEGRAMRVSLAQGR 146
L+ EL+GR ++V++A R
Sbjct: 64 LHDQELDGRRIKVNIANAR 82
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V+ DR+TGRSRGF FVT S E+ +A I +L +E GR ++VN ++
Sbjct: 34 VMRDRDTGRSRGFGFVTYSATEEADAAIASLHDQELDGRRIKVNIAN 80
>gi|242076980|ref|XP_002448426.1| hypothetical protein SORBIDRAFT_06g026990 [Sorghum bicolor]
gi|241939609|gb|EES12754.1| hypothetical protein SORBIDRAFT_06g026990 [Sorghum bicolor]
Length = 278
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 78/130 (60%), Gaps = 8/130 (6%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS---DKPKPKLPLYAETDFKLF 70
GR+RGFAFVTMST E+ A E L+ + +GR ++V FS KP P P+ KL+
Sbjct: 112 GRNRGFAFVTMSTTEEAAAAAEKLNSHDVMGRTIKVEFSRSFRKPAPLPPIIER--HKLY 169
Query: 71 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 130
V NL W ++ + F ++ N + A V++D +G++ GY FV + TK E E AL L+G
Sbjct: 170 VSNLPWKARAPNVKEFFAKF-NPLSANVIFD--NGKAAGYCFVSFGTKEEAEAALTELDG 226
Query: 131 VELEGRAMRV 140
EL GR +R+
Sbjct: 227 KELMGRPVRL 236
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+V NL WS + + F ++G V V+ G+ GR+RG+ FV ST E A E
Sbjct: 76 KLYVANLPWSFPAPEIEKLFAQHGTVKDVEVI-KGKDGRNRGFAFVTMSTTEEAAAAAEK 134
Query: 128 LNGVELEGRAMRVSLAQGRR 147
LN ++ GR ++V ++ R
Sbjct: 135 LNSHDVMGRTIKVEFSRSFR 154
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
V++D G++ G+ FV+ T E+ A + LDG+E +GR +R+
Sbjct: 195 NVIFD--NGKAAGYCFVSFGTKEEAEAALTELDGKELMGRPVRL 236
>gi|225459201|ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|302142004|emb|CBI19207.3| unnamed protein product [Vitis vinifera]
Length = 294
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 7/138 (5%)
Query: 15 RSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD--KPKPKLPLYAE--TDFKLF 70
R+RG AF++M + E+ A + NL+ E GR ++VN+++ K KP P+ + T + LF
Sbjct: 127 RNRGLAFISMGSPEEALAALSNLESYELEGRAIKVNYANPQKKKPSSPIQHKPVTPYNLF 186
Query: 71 VGNLSWSVTTESLTQAFQEYG-NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 129
+ NL + + L + F NVV A V++ RS GYGFV + +K E +TAL S
Sbjct: 187 IANLPYQARAKDLREFFSSGNCNVVSAEVIFHENPRRSSGYGFVSFGSKEEADTALSSFQ 246
Query: 130 GVELEGRAMRVSLAQGRR 147
G GR +RV A+ RR
Sbjct: 247 GQMFMGRPLRV--ARSRR 262
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L N+ W+ T + + F++YG V+ + ++ R+RG F+ + E AL +
Sbjct: 90 RLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKT-RNRGLAFISMGSPEEALAALSN 148
Query: 128 LNGVELEGRAMRVSLAQGRR 147
L ELEGRA++V+ A ++
Sbjct: 149 LESYELEGRAIKVNYANPQK 168
>gi|116180414|ref|XP_001220056.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
gi|88185132|gb|EAQ92600.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
Length = 475
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 14/154 (9%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP----------- 55
V+ D+ETGRSRGF +V + E + G GR LR++F+ KP
Sbjct: 252 VVSDKETGRSRGFGYVDFDSAEAAQKAYDEKSGAFLQGRDLRLDFASKPSADSAPNARAA 311
Query: 56 ---KPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
K + + LFVGNL +S S++ F E V R+ D ESGR +G+ +
Sbjct: 312 DRAKKHGDVISPPSDTLFVGNLPFSADESSVSNYFNEVAQVQSLRIPTDQESGRPKGFAY 371
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
V +S+ + + E+LNG +L+GR +R+ A+ R
Sbjct: 372 VTFSSIDDAKKVFEALNGGDLDGRPVRLDYAKPR 405
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNL W V +L + FQ +V ARV+ D E+GRSRG+G+V + + + A +
Sbjct: 223 LWVGNLGWGVDDNALYEEFQSIEGIVSARVVSDKETGRSRGFGYVDFDSAEAAQKAYDEK 282
Query: 129 NGVELEGRAMRVSLA 143
+G L+GR +R+ A
Sbjct: 283 SGAFLQGRDLRLDFA 297
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 1 MLSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK 56
+ L + D+E+GR +GFA+VT S+++D V E L+G + GR +R++++ KP+
Sbjct: 351 QVQSLRIPTDQESGRPKGFAYVTFSSIDDAKKVFEALNGGDLDGRPVRLDYA-KPR 405
>gi|297820076|ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata]
gi|297323759|gb|EFH54180.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata]
Length = 339
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+VGNLSW V +L F E G VV ARV+YD +SGRS+G+GFV S+ E++ A+ S
Sbjct: 255 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 314
Query: 128 LNGVELEGRAMRVSLAQGR 146
LNG +L+GR +RVS A+ R
Sbjct: 315 LNGADLDGRQIRVSEAEAR 333
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 52/77 (67%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
D KLFVGNLS++V + L Q F+ GNV V+YD +GRSRG+GFV ST AE+E A
Sbjct: 97 PDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAA 156
Query: 125 LESLNGVELEGRAMRVS 141
+ NG E EGR +RV+
Sbjct: 157 AQQFNGYEFEGRPLRVN 173
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
+ V+YD+ TGRSRGF FVTMST + A + +G E+ GR LRVN + P PK
Sbjct: 128 VEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVN-AGPPPPK 180
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 37/52 (71%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDR++GRS+GF FVT+S+ ++ I +L+G + GR +RV+ ++ P+
Sbjct: 285 VIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 336
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 83/151 (54%), Gaps = 11/151 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-DKPKPKLPLYAET 65
V+ DRETGR++GF +V S D + + E GR L V+FS + KP A
Sbjct: 248 VITDRETGRAKGFGYVEFSNAADAAKAQKEMHEYELDGRQLNVDFSTPRAKPDANGGARA 307
Query: 66 D----------FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
+ LF+GN+S+ + ES+ + F EYG++ + D ++G +G+G+V +
Sbjct: 308 NKYGDKRSPPSNTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDF 367
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQGR 146
S++ E ALE+LNG ++ GRA+R+ A R
Sbjct: 368 SSQQEATAALEALNGQDIGGRAIRIDYATPR 398
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 54/87 (62%)
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
P E LFVGN+SW++ + L + F+ +G +VG RV+ D E+GR++G+G+V +S A
Sbjct: 210 PAAEEGIKNLFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFSNAA 269
Query: 120 EMETALESLNGVELEGRAMRVSLAQGR 146
+ A + ++ EL+GR + V + R
Sbjct: 270 DAAKAQKEMHEYELDGRQLNVDFSTPR 296
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 36/51 (70%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
++++++ DR+TG +GF +V S+ ++ A +E L+G++ GR +R++++
Sbjct: 345 ITRVSLPTDRDTGALKGFGYVDFSSQQEATAALEALNGQDIGGRAIRIDYA 395
>gi|224128049|ref|XP_002320231.1| predicted protein [Populus trichocarpa]
gi|222861004|gb|EEE98546.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 76/141 (53%), Gaps = 13/141 (9%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPK-----PKL 59
ETG SRG ++TM +VE + LDG + GR +RV +S P+ P
Sbjct: 137 ETGVSRGCGYITMGSVESARNAVSALDGSDVGGREMRVRYSVEISSGRRNPEALNSAPTK 196
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
L+ E+ KL+VGNL WS + L F +G VV ARVL D + G++R Y F+ + + A
Sbjct: 197 HLFYESPHKLYVGNLPWSTKPDELRNLFNHFGIVVSARVLSDRKGGKNRTYAFLSFLSDA 256
Query: 120 EMETALESLNGVELEGRAMRV 140
E + AL S+NG E R + V
Sbjct: 257 ERDAAL-SMNGTEFYDRMLVV 276
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 27/144 (18%)
Query: 15 RSRGF----AFVTMSTV--EDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK 68
RSR F A V TV E+ N V E +D +F K K P +
Sbjct: 60 RSRKFLAVLAVVDKETVITEEINHVREEID-----------DFELKKKQAKPC------E 102
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+V NL S L + F+ +G+V+ V + E+G SRG G++ + A+ +L
Sbjct: 103 LYVCNLPRSSDIADLVEMFKPFGSVLSVEVSRNPETGVSRGCGYITMGSVESARNAVSAL 162
Query: 129 NGVELEGRAMR----VSLAQGRRS 148
+G ++ GR MR V ++ GRR+
Sbjct: 163 DGSDVGGREMRVRYSVEISSGRRN 186
>gi|681904|dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 326
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+VGNLSW V +L F E G VV ARV+YD +SGRS+G+GFV S+ E++ A+ S
Sbjct: 242 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 301
Query: 128 LNGVELEGRAMRVSLAQGR 146
LNG +L+GR +RVS A+ R
Sbjct: 302 LNGADLDGRQIRVSEAEAR 320
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 52/77 (67%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
D KLFVGNLS++V + L Q F+ GNV V+YD +GRSRG+GFV ST AE+E A
Sbjct: 89 PDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAA 148
Query: 125 LESLNGVELEGRAMRVS 141
+ NG E EGR +RV+
Sbjct: 149 AQQFNGYEFEGRPLRVN 165
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
+ V+YD+ TGRSRGF FVTMST + A + +G E+ GR LRVN + P PK
Sbjct: 120 VEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVN-AGPPPPK 172
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 37/52 (71%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDR++GRS+GF FVT+S+ ++ I +L+G + GR +RV+ ++ P+
Sbjct: 272 VIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 323
>gi|169623995|ref|XP_001805404.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
gi|111056352|gb|EAT77472.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
Length = 451
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 11/150 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
V+ DRE+GRS+GF +V ++ D + E GR L V+FS P+ K A +
Sbjct: 229 VITDRESGRSKGFGYVEFASAADAAKAKAEMHEYELDGRGLNVDFS-TPREKPDQSARAN 287
Query: 67 ----------FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
LF+GNLS+ + E + + FQEYGN+ + D ++G +G+G+V +
Sbjct: 288 KYGDKRSAPANTLFLGNLSFDCSNEGIQEIFQEYGNITRVSLPTDRDTGSLKGFGYVDFG 347
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGR 146
T E ALE+LNG E+EGRA+R+ A R
Sbjct: 348 TVEEATAALEALNGQEVEGRAIRIDYAAPR 377
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVG+LSW++ + L + F+ +G + G RV+ D ESGRS+G+G+V +++ A+ A +
Sbjct: 200 LFVGSLSWNIDEDWLRREFEGFGEITGCRVITDRESGRSKGFGYVEFASAADAAKAKAEM 259
Query: 129 NGVELEGRAMRVSLAQGR 146
+ EL+GR + V + R
Sbjct: 260 HEYELDGRGLNVDFSTPR 277
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 36/51 (70%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
++++++ DR+TG +GF +V TVE+ A +E L+G+E GR +R++++
Sbjct: 324 ITRVSLPTDRDTGSLKGFGYVDFGTVEEATAALEALNGQEVEGRAIRIDYA 374
>gi|15231817|ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|186511018|ref|NP_850692.2| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|334185948|ref|NP_001190078.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|30316379|sp|Q43349.2|ROC2_ARATH RecName: Full=29 kDa ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein cp29; Flags: Precursor
gi|6729497|emb|CAB67653.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
gi|14532570|gb|AAK64013.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|18655393|gb|AAL76152.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|21593426|gb|AAM65393.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
gi|332645568|gb|AEE79089.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645569|gb|AEE79090.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645570|gb|AEE79091.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
Length = 342
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+VGNLSW V +L F E G VV ARV+YD +SGRS+G+GFV S+ E++ A+ S
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 128 LNGVELEGRAMRVSLAQGR 146
LNG +L+GR +RVS A+ R
Sbjct: 318 LNGADLDGRQIRVSEAEAR 336
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 52/77 (67%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
D KLFVGNLS++V + L Q F+ GNV V+YD +GRSRG+GFV ST AE+E A
Sbjct: 97 PDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAA 156
Query: 125 LESLNGVELEGRAMRVS 141
+ NG E EGR +RV+
Sbjct: 157 AQQFNGYEFEGRPLRVN 173
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
+ V+YD+ TGRSRGF FVTMST + A + +G E+ GR LRVN + P PK
Sbjct: 128 VEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVN-AGPPPPK 180
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 37/52 (71%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDR++GRS+GF FVT+S+ ++ I +L+G + GR +RV+ ++ P+
Sbjct: 288 VIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 339
>gi|681902|dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 334
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+VGNLSW V +L F E G VV ARV+YD +SGRS+G+GFV S+ E++ A+ S
Sbjct: 250 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 309
Query: 128 LNGVELEGRAMRVSLAQGR 146
LNG +L+GR +RVS A+ R
Sbjct: 310 LNGADLDGRQIRVSEAEAR 328
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 52/77 (67%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
D KLFVGNLS++V + L Q F+ GNV V+YD +GRSRG+GFV ST AE+E A
Sbjct: 97 PDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAA 156
Query: 125 LESLNGVELEGRAMRVS 141
+ NG E EGR +RV+
Sbjct: 157 AQQFNGYEFEGRPLRVN 173
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
+ V+YD+ TGRSRGF FVTMST + A + +G E+ GR LRVN + P PK
Sbjct: 128 VEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVN-AGPPPPK 180
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 37/52 (71%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDR++GRS+GF FVT+S+ ++ I +L+G + GR +RV+ ++ P+
Sbjct: 280 VIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 331
>gi|388504962|gb|AFK40547.1| unknown [Lotus japonicus]
Length = 285
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 80/140 (57%), Gaps = 7/140 (5%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA------ETDF 67
GR +G+AFVTM++ E+ A ++ D E GRILRV + + K P E
Sbjct: 123 GRGKGYAFVTMASGEEAQAAVDKFDTLELSGRILRVELAKRFKKPSPPGPPSPPPSEARH 182
Query: 68 KLFVGNLSWSVTTESLTQAFQE-YGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
++ NL+W V + L + F E + + AR+++D SG + GYGF+ Y TK E E A+
Sbjct: 183 VIYASNLAWKVRSTHLREFFTENFKAPLSARIVFDTPSGWATGYGFISYLTKEEAEAAIS 242
Query: 127 SLNGVELEGRAMRVSLAQGR 146
+L+G EL GR++ + +++ +
Sbjct: 243 ALDGKELMGRSLFLKISEKK 262
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+V L WS++ + F + G V ++ G+ GR +GY FV ++ E + A++
Sbjct: 87 KLYVFTLPWSMSAADIKDLFGQCGTVTDVEIIR-GKDGRGKGYAFVTMASGEEAQAAVDK 145
Query: 128 LNGVELEGRAMRVSLAQ 144
+ +EL GR +RV LA+
Sbjct: 146 FDTLELSGRILRVELAK 162
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
+++D +G + G+ F++ T E+ A I LDG+E +GR L + S+K
Sbjct: 214 IVFDTPSGWATGYGFISYLTKEEAEAAISALDGKELMGRSLFLKISEK 261
>gi|397642327|gb|EJK75167.1| hypothetical protein THAOC_03118, partial [Thalassiosira oceanica]
Length = 452
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 82/158 (51%), Gaps = 21/158 (13%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP--------- 60
+R T R RGF FVT+ST + I +D + GR +RVN S +P+ + P
Sbjct: 53 ERGTSRPRGFGFVTLSTRQAAEDAIAKMDQSQLDGRTIRVNES-RPRGEGPGARRSNEPG 111
Query: 61 ----------LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 110
D KL+VGNLS+ E++ F++YG V + D ++GR RG+
Sbjct: 112 TGPGGYGAFNPQGREDVKLYVGNLSFDTNEEAVRSMFEQYGTVSDCFLPSDRDTGRPRGF 171
Query: 111 GFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
FV K E ETA +NG+EL+GR +RV+ AQ + S
Sbjct: 172 AFVTMPAK-EAETACNKVNGMELDGRTVRVNEAQPKVS 208
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL++GNL +S L F +G V + + + R RG+GFV ST+ E A+
Sbjct: 20 KLYIGNLDYSTDEPQLRSVFGAFGAVTDVFLPMERGTSRPRGFGFVTLSTRQAAEDAIAK 79
Query: 128 LNGVELEGRAMRVSLAQGR 146
++ +L+GR +RV+ ++ R
Sbjct: 80 MDQSQLDGRTIRVNESRPR 98
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 81/155 (52%), Gaps = 25/155 (16%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN---------------- 50
V DR TGRSRGF FVT ++ E + +E L+G+E GR + V+
Sbjct: 70 VQTDRNTGRSRGFGFVTFASPEAVDKALE-LNGKEIDGRSINVDKSVEKDQNQVRERRAR 128
Query: 51 -FSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
F D P +E +LFVGNLS+ T E L + F +YG++ + +SGR +G
Sbjct: 129 TFGDAP-------SEPSSRLFVGNLSFDATEEQLWEVFSDYGSIKSVHMPTSRDSGRPKG 181
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+G+V + + A ESL G E+ GRA+R+ +Q
Sbjct: 182 FGYVEFEDIESAKKAHESLVGQEIAGRAIRLEFSQ 216
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG LSW+V L F + G +V A V D +GRSRG+GFV +++ ++ ALE L
Sbjct: 41 IFVGMLSWNVDNAWLESEFAQCGEIVSAHVQTDRNTGRSRGFGFVTFASPEAVDKALE-L 99
Query: 129 NGVELEGRAMRV 140
NG E++GR++ V
Sbjct: 100 NGKEIDGRSINV 111
>gi|255089439|ref|XP_002506641.1| predicted protein [Micromonas sp. RCC299]
gi|226521914|gb|ACO67899.1| predicted protein [Micromonas sp. RCC299]
Length = 285
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 9/137 (6%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGR--ILRV------NFSDKPKPKLPLYAET 65
GRS+G+ V T + N+ I L + GR I+R+ N S P P A +
Sbjct: 146 GRSKGWGLVDFETPDAANSAINTLHNSDLQGRSIIVRLERAGGANKSGGPNAGRP-EASS 204
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
++ V NL WS T+E L Q FQ+ G V+ A + ++GRS+G+G V + T+ + + A+
Sbjct: 205 GLQIVVRNLPWSTTSEDLRQVFQQVGTVIKAEAVCHADTGRSKGWGTVLFETREQAQAAI 264
Query: 126 ESLNGVELEGRAMRVSL 142
+ NGVELE R M++ L
Sbjct: 265 QGFNGVELEHRPMQIKL 281
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 13/141 (9%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP------------L 61
GRSRG+ V S V + I+ LDG R + V P P
Sbjct: 44 GRSRGYGIVEYSNVNEAQVAIQTLDGHTLGDRNITVREDKAPTKSAPSKSGGNRSTIGDT 103
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
A + +VGNL+W ESL + G VV A V GRS+G+G V + T
Sbjct: 104 PAADGCRCYVGNLAWETNEESLIAHCSQVGTVVQAEVAKQ-PGGRSKGWGLVDFETPDAA 162
Query: 122 ETALESLNGVELEGRAMRVSL 142
+A+ +L+ +L+GR++ V L
Sbjct: 163 NSAINTLHNSDLQGRSIIVRL 183
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD---GESGRSRGYGFVCYSTKAEMETA 124
+L+VGN+ WS T + L F G + L D G GRSRGYG V YS E + A
Sbjct: 8 RLYVGNIPWSTTVDELRGIFSGCGTIT----LVDIPTGRQGRSRGYGIVEYSNVNEAQVA 63
Query: 125 LESLNGVELEGRAMRV 140
+++L+G L R + V
Sbjct: 64 IQTLDGHTLGDRNITV 79
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 60/79 (75%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSWS T ++L +AF EYG VV + V+ D E+GRSRG+GFV +S++ E E A+ S
Sbjct: 4 KVYVGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAAINS 63
Query: 128 LNGVELEGRAMRVSLAQGR 146
L+ +L+GR ++V+LA R
Sbjct: 64 LHEQDLDGRRIKVNLANAR 82
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V+ DRETGRSRGF FVT S+ ++ A I +L ++ GR ++VN ++
Sbjct: 34 VMRDRETGRSRGFGFVTFSSEQEAEAAINSLHEQDLDGRRIKVNLAN 80
>gi|334185950|ref|NP_001190079.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645571|gb|AEE79092.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
Length = 363
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+VGNLSW V +L F E G VV ARV+YD +SGRS+G+GFV S+ E++ A+ S
Sbjct: 279 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 338
Query: 128 LNGVELEGRAMRVSLAQGR 146
LNG +L+GR +RVS A+ R
Sbjct: 339 LNGADLDGRQIRVSEAEAR 357
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 53/98 (54%), Gaps = 21/98 (21%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
D KLFVGNLS++V + L Q F+ GNV V+YD +GRSRG+GFV ST AE+E A
Sbjct: 97 PDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAA 156
Query: 125 LESLN---------------------GVELEGRAMRVS 141
+ N G+E EGR +RV+
Sbjct: 157 AQQFNGYVSRYLCSLLCLYLLIRVLCGLEFEGRPLRVN 194
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 37/52 (71%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDR++GRS+GF FVT+S+ ++ I +L+G + GR +RV+ ++ P+
Sbjct: 309 VIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 360
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 22/75 (29%)
Query: 5 LTVLYDRETGRSRGFAFVTMST---------------------VEDCNAVIENLDGREYL 43
+ V+YD+ TGRSRGF FVTMST + +I L G E+
Sbjct: 128 VEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYVSRYLCSLLCLYLLIRVLCGLEFE 187
Query: 44 GRILRVNFSDKPKPK 58
GR LRVN + P PK
Sbjct: 188 GRPLRVN-AGPPPPK 201
>gi|384245275|gb|EIE18770.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 351
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 86/146 (58%), Gaps = 3/146 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+ ++ ++ D+ TG S G+ FV + +++L+GR G+ LRVN++ + +
Sbjct: 48 VGEIKIIKDKLTGLSAGYGFVQFLDHRAADMALQSLNGRVLHGQELRVNWAFQKDQRED- 106
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
+ + F++FVG+L+ + + L +AFQ G ARV++D +GRS+GYGFV + T+A+
Sbjct: 107 -SASQFQIFVGDLASDINDKLLCEAFQSCG-CADARVMWDHNTGRSKGYGFVSFKTRADA 164
Query: 122 ETALESLNGVELEGRAMRVSLAQGRR 147
E AL ++G L R +R AQ ++
Sbjct: 165 EQALSQMSGTMLGSRRIRCGWAQHKQ 190
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPKPKLPLYAET 65
V++D TGRS+G+ FV+ T D + + G R +R ++ K + +A
Sbjct: 141 VMWDHNTGRSKGYGFVSFKTRADAEQALSQMSGTMLGSRRIRCGWAQHKQENSQASFAAV 200
Query: 66 D--------------FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
D ++VGNL+ V+ L A ++G V+ ++ R GY
Sbjct: 201 DRVSTLSRAQADPENANVYVGNLAPDVSDAELQTAVSQFGAVLDVKIY------RKGGYA 254
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVS 141
F +++ A+ A+ L+G L G+A++ S
Sbjct: 255 FAQFASHADAVRAIVGLSGQNLGGKALKCS 284
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNL VT L + F G V +++ D +G S GYGFV + + AL+SL
Sbjct: 24 LYVGNLHPFVTDAMLQEIFSTLGQVGEIKIIKDKLTGLSAGYGFVQFLDHRAADMALQSL 83
Query: 129 NGVELEGRAMRVSLA 143
NG L G+ +RV+ A
Sbjct: 84 NGRVLHGQELRVNWA 98
>gi|367016631|ref|XP_003682814.1| hypothetical protein TDEL_0G02360 [Torulaspora delbrueckii]
gi|359750477|emb|CCE93603.1| hypothetical protein TDEL_0G02360 [Torulaspora delbrueckii]
Length = 402
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 84/142 (59%), Gaps = 3/142 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + ++ D+ + +AFV D N ++ L+G++ ++++N++ + + P
Sbjct: 70 IANVKIMVDKNNSNAN-YAFVEYFQSHDANIALQTLNGKQIENNVVKINWAFQSQQVSP- 127
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
E F LFVG+L+ V E+L AF+E+ + V++D ++G SRGYGFV + ++ E
Sbjct: 128 -DEATFNLFVGDLNVDVDDETLRNAFKEFPTYLQGHVMWDMQTGGSRGYGFVSFGSQEEA 186
Query: 122 ETALESLNGVELEGRAMRVSLA 143
+ A++++ G EL GR +R++ A
Sbjct: 187 QKAMDAMQGHELNGRPLRINWA 208
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+D L+VGNL S+ E L Q FQ G + +++ D ++ + Y FV Y + A
Sbjct: 42 SDKVLYVGNLDTSINEEILKQYFQVGGPIANVKIMVD-KNNSNANYAFVEYFQSHDANIA 100
Query: 125 LESLNGVELEGRAMRVSLA 143
L++LNG ++E ++++ A
Sbjct: 101 LQTLNGKQIENNVVKINWA 119
>gi|146420743|ref|XP_001486325.1| hypothetical protein PGUG_01996 [Meyerozyma guilliermondii ATCC
6260]
Length = 397
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 78/136 (57%), Gaps = 12/136 (8%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNF-------SDKPKPKLPLYAETDFKLFV 71
+AFV T ED +V+ +G E G +++N+ S P+LPLY +FV
Sbjct: 117 YAFVEFDTREDAESVLTAFNGSEVGGSSIKINWAYQLSTISTSSSPELPLYT-----IFV 171
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS V E+L +AF ++ + A V++D ++ RSRGYGFV ++ AE E AL ++ G+
Sbjct: 172 GDLSAEVDDETLGKAFDQFPSRKQAHVMWDMQTSRSRGYGFVSFADPAEAENALVTMPGL 231
Query: 132 ELEGRAMRVSLAQGRR 147
+ GRA+R + A R
Sbjct: 232 FIGGRAIRCNWASHRH 247
>gi|401838326|gb|EJT42016.1| PUB1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 459
Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 90/145 (62%), Gaps = 4/145 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + ++ D+ ++ +AFV D N ++ L+G++ I+++N++ + +
Sbjct: 101 IANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQS--- 156
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
++ F LFVG+L+ +V E+L AF+++ + + V++D ++G SRGYGFV ++++ +
Sbjct: 157 SSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDA 216
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
+TA++++ G +L GR +R++ A R
Sbjct: 217 QTAMDTMQGQDLNGRPLRINWAAKR 241
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+D L+VGNL ++T + L Q FQ G + +++ D ++ ++ Y FV Y + A
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIA 131
Query: 125 LESLNGVELEGRAMRVSLA 143
L++LNG ++E ++++ A
Sbjct: 132 LQTLNGKQIENNIVKINWA 150
>gi|365758602|gb|EHN00436.1| Pub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 455
Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 90/145 (62%), Gaps = 4/145 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + ++ D+ ++ +AFV D N ++ L+G++ I+++N++ + +
Sbjct: 101 IANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQS--- 156
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
++ F LFVG+L+ +V E+L AF+++ + + V++D ++G SRGYGFV ++++ +
Sbjct: 157 SSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDA 216
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
+TA++++ G +L GR +R++ A R
Sbjct: 217 QTAMDTMQGQDLNGRPLRINWAAKR 241
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+D L+VGNL ++T + L Q FQ G + +++ D ++ ++ Y FV Y + A
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIA 131
Query: 125 LESLNGVELEGRAMRVSLA 143
L++LNG ++E ++++ A
Sbjct: 132 LQTLNGKQIENNIVKINWA 150
>gi|79316226|ref|NP_001030925.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189111|gb|AEE27232.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 294
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 14/153 (9%)
Query: 1 MLSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-------- 52
++S V + +TG SRG +VTM ++ I +LDG E GR +RV +S
Sbjct: 134 VISVEVVSRNPQTGESRGSGYVTMGSINSAKIAIASLDGTEVGGREMRVRYSVDMNPGTR 193
Query: 53 DKPK-----PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS 107
P+ PK L E+ K++VGNL W + L F ++G +V RVL+D ++GR+
Sbjct: 194 RNPEVLNSTPKKILMYESQHKVYVGNLPWFTQPDGLRNHFSKFGTIVSTRVLHDRKTGRN 253
Query: 108 RGYGFVCYSTKAEMETALESLNGVELEGRAMRV 140
R + F+ +++ E + AL S NG + EGR + V
Sbjct: 254 RVFAFLSFTSGEERDAAL-SFNGTQYEGRRIIV 285
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 10/150 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV------NFSDKPKPKLP 60
V DR TG+SRGF V + I+ ++G+E GR + V N + + + +
Sbjct: 374 VNIDRNTGKSRGFGHVEFADASSVQKAIDTMNGKEIDGRPVNVDRAPGLNKNQQRENRAK 433
Query: 61 LYAETDFK----LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
+ ++ LFVGNLSW T +++ +AF E+G V R+ D ESGR +G+G+V +
Sbjct: 434 AFGDSTSAPSSVLFVGNLSWDATEDAVWEAFGEHGEVKSVRLPTDRESGRPKGFGYVEFV 493
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ A E+L+G E+ GR++R+ +Q R
Sbjct: 494 DVDAAKAAFEALSGTEIGGRSIRLDYSQPR 523
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 60 PLYAETDFK-LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
P E + K +FVG LSW+V + L F E G VV ARV D +G+SRG+G V ++
Sbjct: 335 PAEQEEESKTIFVGRLSWNVDDDQLASEFAECGEVVSARVNIDRNTGKSRGFGHVEFADA 394
Query: 119 AEMETALESLNGVELEGRAMRVSLAQG 145
+ ++ A++++NG E++GR + V A G
Sbjct: 395 SSVQKAIDTMNGKEIDGRPVNVDRAPG 421
>gi|449445537|ref|XP_004140529.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 286
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 76/141 (53%), Gaps = 13/141 (9%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD------------KPKPKL 59
ETG S+G +VTM ++ I LDG + GR +RV F+ PK
Sbjct: 138 ETGISKGCGYVTMGSINSAKVSITALDGSDVGGREMRVRFAVDMNSKKRNLNNLHSSPKK 197
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+ E+ +K++VGNLSW V L F +G VV A+VL D +G+SR YGF+ +S+ A
Sbjct: 198 NIIYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAA 257
Query: 120 EMETALESLNGVELEGRAMRV 140
E + ++ SL+G E R + V
Sbjct: 258 ERDASI-SLDGTEYNNRKLVV 277
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+V NL S L + F+ YG V+ A V + E+G S+G G+V + + ++ +
Sbjct: 103 ELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKVSITA 162
Query: 128 LNGVELEGRAMRVSLA 143
L+G ++ GR MRV A
Sbjct: 163 LDGSDVGGREMRVRFA 178
>gi|226499338|ref|NP_001149519.1| glycine-rich RNA-binding protein 8 [Zea mays]
gi|195627730|gb|ACG35695.1| glycine-rich RNA-binding protein 8 [Zea mays]
Length = 198
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 57/79 (72%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+++ F+GNLSWS T ESL AF ++GN+ A+V+ D SGRSRG+GFV + K ME A+
Sbjct: 6 EYRCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAI 65
Query: 126 ESLNGVELEGRAMRVSLAQ 144
E +NG++L+GR + V AQ
Sbjct: 66 EGMNGLDLDGRNITVDKAQ 84
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
L++ V+ D+ +GRSRGF FVT + IE ++G + GR + V DK +P+ P
Sbjct: 33 LTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEGMNGLDLDGRNITV---DKAQPQGP 88
>gi|443899731|dbj|GAC77060.1| nuclear localization sequence binding protein, partial [Pseudozyma
antarctica T-34]
Length = 400
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 10/149 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
V DR TG+SRGF +V +T E G+E GR +R++ S PK +
Sbjct: 234 VQLDRTTGKSRGFGYVDFATAAAAKKAFEEGQGKEVDGRAIRIDLS-TPKGDVTDNRAKK 292
Query: 67 FK---------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
F LF+GNLS+ ++ + + AF E+G V G R+ D +SGR +G+G+V ++
Sbjct: 293 FNDQRSAPSSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAA 352
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQGR 146
+ + A++++ G EL GR +R+ + R
Sbjct: 353 QESAQAAIDAMTGQELAGRPLRLDFSTPR 381
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+++VG LSW+V E L + +G V ARV D +G+SRG+G+V ++T A + A E
Sbjct: 204 QIWVGQLSWNVDNEWLKSEMEAFGEVTSARVQLDRTTGKSRGFGYVDFATAAAAKKAFEE 263
Query: 128 LNGVELEGRAMRVSLA 143
G E++GRA+R+ L+
Sbjct: 264 GQGKEVDGRAIRIDLS 279
>gi|449518978|ref|XP_004166512.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 284
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 76/141 (53%), Gaps = 13/141 (9%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD------------KPKPKL 59
ETG S+G +VTM ++ I LDG + GR +RV F+ PK
Sbjct: 136 ETGISKGCGYVTMGSINSAKVSITALDGSDVGGREMRVRFAVDMNSKKRNLNNLHSSPKK 195
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+ E+ +K++VGNLSW V L F +G VV A+VL D +G+SR YGF+ +S+ A
Sbjct: 196 NIIYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAA 255
Query: 120 EMETALESLNGVELEGRAMRV 140
E + ++ SL+G E R + V
Sbjct: 256 ERDASI-SLDGTEYNNRKLVV 275
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+V NL S L + F+ YG V+ A V + E+G S+G G+V + + ++ +
Sbjct: 101 ELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKVSITA 160
Query: 128 LNGVELEGRAMRVSLA 143
L+G ++ GR MRV A
Sbjct: 161 LDGSDVGGREMRVRFA 176
>gi|728594|emb|CAA88558.1| glycine rich protein, RNA binding protein [Hordeum vulgare subsp.
vulgare]
Length = 173
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 61/86 (70%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AET+++ FVG L+W+ +L AF +YG ++ A+++ D E+GRSRG+GFV + ++ M
Sbjct: 2 AETEYRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMR 61
Query: 123 TALESLNGVELEGRAMRVSLAQGRRS 148
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 62 QAIEEMNGKELDGRQVTVNEAQSRRS 87
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + E IE ++G+E GR + VN
Sbjct: 37 IINDRETGRSRGFGFVTFGSEESMRQAIEEMNGKELDGRQVTVN 80
>gi|169772913|ref|XP_001820925.1| glycine-rich RNA-binding protein 2 [Aspergillus oryzae RIB40]
gi|238490830|ref|XP_002376652.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
gi|83768786|dbj|BAE58923.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697065|gb|EED53406.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
Length = 125
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSW+ ESL Q F E+GNV+ A V+ D E+GRSRG+GFV +S + E + A+
Sbjct: 5 KVYVGNLSWNTNDESLRQTFSEFGNVLDAIVMKDRETGRSRGFGFVTFSAQTEADAAIGG 64
Query: 128 LNGVELEGRAMRVSLAQGR 146
LN EL+GR +RV+LA R
Sbjct: 65 LNEQELDGRRIRVNLANAR 83
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V+ DRETGRSRGF FVT S + +A I L+ +E GR +RVN ++
Sbjct: 35 VMKDRETGRSRGFGFVTFSAQTEADAAIGGLNEQELDGRRIRVNLAN 81
>gi|390602556|gb|EIN11949.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 161
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 58/79 (73%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSW+ T ESL AF YG ++ + V+ D ++GRSRG+GFV +S+ AE + A+ S
Sbjct: 4 KVYVGNLSWNTTDESLRAAFSHYGQILDSIVMRDRDTGRSRGFGFVTFSSSAEADNAIAS 63
Query: 128 LNGVELEGRAMRVSLAQGR 146
LN +L+GR +RV+LA R
Sbjct: 64 LNEQDLDGRRIRVNLANAR 82
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V+ DR+TGRSRGF FVT S+ + + I +L+ ++ GR +RVN ++
Sbjct: 34 VMRDRDTGRSRGFGFVTFSSSAEADNAIASLNEQDLDGRRIRVNLAN 80
>gi|238014210|gb|ACR38140.1| unknown [Zea mays]
gi|414873814|tpg|DAA52371.1| TPA: glycine-rich RNA-binding protein 8 isoform 1 [Zea mays]
gi|414873815|tpg|DAA52372.1| TPA: glycine-rich RNA-binding protein 8 isoform 2 [Zea mays]
gi|414873816|tpg|DAA52373.1| TPA: glycine-rich RNA-binding protein 8 isoform 3 [Zea mays]
Length = 205
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%)
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
++ F+GNLSWS T ESL AF ++GN+ A+V+ D SGRSRG+GFV + K ME A+E
Sbjct: 7 YRCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIE 66
Query: 127 SLNGVELEGRAMRVSLAQ 144
+NG++L+GR + V AQ
Sbjct: 67 GMNGLDLDGRNITVDKAQ 84
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
L++ V+ D+ +GRSRGF FVT + IE ++G + GR + V DK +P+ P
Sbjct: 33 LTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEGMNGLDLDGRNITV---DKAQPQGP 88
>gi|326515712|dbj|BAK07102.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 104
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 63/86 (73%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ FVG L+W+ +SL AF +YG+V+ ++++ D E+GRSRG+GFV +++ M
Sbjct: 2 ADVEYRCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMR 61
Query: 123 TALESLNGVELEGRAMRVSLAQGRRS 148
A+E++NG +L+GR + V+ AQ RRS
Sbjct: 62 QAIEAMNGQDLDGRNITVNEAQSRRS 87
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT ++ E IE ++G++ GR + VN
Sbjct: 37 IITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVN 80
>gi|15223293|ref|NP_171616.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930401|gb|AAL31886.1|AF419554_1 At1g01080/T25K16_7 [Arabidopsis thaliana]
gi|21554268|gb|AAM63343.1| ribonucleoprotein, putative [Arabidopsis thaliana]
gi|22135777|gb|AAM91045.1| At1g01080/T25K16_7 [Arabidopsis thaliana]
gi|332189110|gb|AEE27231.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 293
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS--------DKPK----- 56
+ +TG SRG +VTM ++ I +LDG E GR +RV +S P+
Sbjct: 142 NPQTGESRGSGYVTMGSINSAKIAIASLDGTEVGGREMRVRYSVDMNPGTRRNPEVLNST 201
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
PK L E+ K++VGNL W + L F ++G +V RVL+D ++GR+R + F+ ++
Sbjct: 202 PKKILMYESQHKVYVGNLPWFTQPDGLRNHFSKFGTIVSTRVLHDRKTGRNRVFAFLSFT 261
Query: 117 TKAEMETALESLNGVELEGRAMRV 140
+ E + AL S NG + EGR + V
Sbjct: 262 SGEERDAAL-SFNGTQYEGRRIIV 284
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
P+ +L+V N+ S L FQ +G V+ V + ++G SRG G+V +
Sbjct: 101 PVKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVTMGSIN 160
Query: 120 EMETALESLNGVELEGRAMRV 140
+ A+ SL+G E+ GR MRV
Sbjct: 161 SAKIAIASLDGTEVGGREMRV 181
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGR 45
VL+DR+TGR+R FAF++ ++ E+ +A + + +G +Y GR
Sbjct: 243 VLHDRKTGRNRVFAFLSFTSGEERDAAL-SFNGTQYEGR 280
>gi|392593259|gb|EIW82584.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 116
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 59/79 (74%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSW+ T ++L QAF +GNVV + V+ D ++GRSRG+GFV YS+ E E+A+
Sbjct: 5 KIYVGNLSWNTTDDTLRQAFSTFGNVVDSVVMRDRDTGRSRGFGFVTYSSTQEAESAISG 64
Query: 128 LNGVELEGRAMRVSLAQGR 146
LN +L+GR ++V++A R
Sbjct: 65 LNDQDLDGRRIKVNIANPR 83
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V+ DR+TGRSRGF FVT S+ ++ + I L+ ++ GR ++VN ++
Sbjct: 35 VMRDRDTGRSRGFGFVTYSSTQEAESAISGLNDQDLDGRRIKVNIAN 81
>gi|326507732|dbj|BAJ86609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 100
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 58/79 (73%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGNLSW V +L F E G V+ A+V+YD +SGRSRG+GFV Y + E+ A+ +
Sbjct: 15 KLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISN 74
Query: 128 LNGVELEGRAMRVSLAQGR 146
L+GV+L+GR +RV++A+ +
Sbjct: 75 LDGVDLDGRQIRVTVAESK 93
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPKPK 58
V+YDR++GRSRGF FVT + ++ N I NLDG + GR +RV ++ KP+ +
Sbjct: 45 VIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAESKPREQ 97
>gi|425783198|gb|EKV21057.1| Nucleolin protein Nsr1, putative [Penicillium digitatum Pd1]
Length = 467
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 92/160 (57%), Gaps = 16/160 (10%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS--------- 52
LS + ++ DRETGRSRGF +V ++ D +E G + GR + ++++
Sbjct: 237 LSGVRIVTDRETGRSRGFGYVEYNSAADAAKAMEAKKGTDLDGRTINLDYAAPRQANTQG 296
Query: 53 -DKPKPKLPLY-----AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR 106
D+ + + Y E+D LFVGNL +S T ++L + F G+V+G R+ + E+GR
Sbjct: 297 ADRSQDRARSYGDQTSPESDT-LFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGR 355
Query: 107 SRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+G+G+V +S+ E + A +LNG ELEGRA+R+ + R
Sbjct: 356 PKGFGYVQFSSIDEAKAAHAALNGHELEGRAIRLDFSTPR 395
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 55/80 (68%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LF+GNLSW+V E + + F E+G + G R++ D E+GRSRG+G+V Y++ A+ A+E+
Sbjct: 213 LFIGNLSWNVDEEWVQREFSEFGELSGVRIVTDRETGRSRGFGYVEYNSAADAAKAMEAK 272
Query: 129 NGVELEGRAMRVSLAQGRRS 148
G +L+GR + + A R++
Sbjct: 273 KGTDLDGRTINLDYAAPRQA 292
>gi|46115998|ref|XP_384017.1| hypothetical protein FG03841.1 [Gibberella zeae PH-1]
Length = 1163
Score = 89.0 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 39/79 (49%), Positives = 58/79 (73%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNL W+ T +SL AFQ+YG ++ + V+ D ++GRSRG+GFV + + E ETA+ S
Sbjct: 4 KVYVGNLGWNTTDDSLRNAFQDYGQILDSIVMRDRDTGRSRGFGFVTFGSSQEAETAIIS 63
Query: 128 LNGVELEGRAMRVSLAQGR 146
LN EL+GR ++V+LA R
Sbjct: 64 LNEQELDGRRIKVNLANAR 82
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V+ DR+TGRSRGF FVT + ++ I +L+ +E GR ++VN ++
Sbjct: 34 VMRDRDTGRSRGFGFVTFGSSQEAETAIISLNEQELDGRRIKVNLAN 80
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora indica
DSM 11827]
Length = 236
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 59/79 (74%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSW+ T ++L +AF++YGNVV + V+ D E+GRSRG+GFV YS++ E A+
Sbjct: 4 KIYVGNLSWNTTDDTLREAFRQYGNVVDSIVMRDRETGRSRGFGFVTYSSEEEASNAISG 63
Query: 128 LNGVELEGRAMRVSLAQGR 146
LN L+GR ++V+LA R
Sbjct: 64 LNETSLDGRQIKVNLANAR 82
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V+ DRETGRSRGF FVT S+ E+ + I L+ GR ++VN ++
Sbjct: 34 VMRDRETGRSRGFGFVTYSSEEEASNAISGLNETSLDGRQIKVNLAN 80
>gi|410083501|ref|XP_003959328.1| hypothetical protein KAFR_0J01260 [Kazachstania africana CBS 2517]
gi|372465919|emb|CCF60193.1| hypothetical protein KAFR_0J01260 [Kazachstania africana CBS 2517]
Length = 365
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 83/145 (57%), Gaps = 3/145 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+ + V+ D++ +AF+ ST D N ++ L+G + + +++N++ + + L
Sbjct: 57 IVDVKVMVDKKNNHV-NYAFIEYSTNHDANVALQTLNGIQIENKNIKINWAFQSQTNL-- 113
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
+T F LF+G+L+ +V +L AF+ + A V++D ++ RSRGYGFV + T
Sbjct: 114 NDDTSFNLFIGDLNVNVDDTTLANAFKSCPGFLQAHVMWDMQTSRSRGYGFVSFDTHENA 173
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
+ A++ + G E+ GRA+R++ A R
Sbjct: 174 QAAMDQMQGHEINGRAIRINWATKR 198
>gi|50289655|ref|XP_447259.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526568|emb|CAG60192.1| unnamed protein product [Candida glabrata]
Length = 416
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 78/130 (60%), Gaps = 6/130 (4%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD--FKLFVGNLSW 76
+AFV D N ++ L+G + + L++N++ + + AE D F LFVG+L+
Sbjct: 100 YAFVEYIRSHDANVALQTLNGVQLENKTLKINWAFETQ----QAAENDDTFNLFVGDLNV 155
Query: 77 SVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGR 136
V E+L F+E+ + A V++D ++GRSRGYGFV +S + E + A++++ G +L GR
Sbjct: 156 DVDDETLAGTFREFPTFIQAHVMWDMQTGRSRGYGFVSFSNQEEAQKAMDAMQGKDLSGR 215
Query: 137 AMRVSLAQGR 146
+R++ A R
Sbjct: 216 QIRINWATKR 225
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+D L+VGNL S+T + L Q FQ G + +++ D ++ Y FV Y + A
Sbjct: 56 SDRVLYVGNLDKSITEDLLKQYFQAGGPIQNVKIIEDMKN-EYVNYAFVEYIRSHDANVA 114
Query: 125 LESLNGVELEGRAMRVSLA 143
L++LNGV+LE + ++++ A
Sbjct: 115 LQTLNGVQLENKTLKINWA 133
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
V++D +TGRSRG+ FV+ S E+ ++ + G++ GR +R+N++ K
Sbjct: 177 VMWDMQTGRSRGYGFVSFSNQEEAQKAMDAMQGKDLSGRQIRINWATK 224
>gi|365763380|gb|EHN04909.1| Pub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 453
Score = 88.6 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 89/145 (61%), Gaps = 4/145 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + ++ D+ ++ +AFV D N ++ L+G++ I+++N++ + +
Sbjct: 101 IANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQS--- 156
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
++ F LFVG+L+ +V E+L AF+++ + + V++D ++G SRGYGFV ++++ +
Sbjct: 157 SSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDA 216
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
+ A++S+ G +L GR +R++ A R
Sbjct: 217 QNAMDSMQGQDLNGRPLRINWAAKR 241
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+D L+VGNL ++T + L Q FQ G + +++ D ++ ++ Y FV Y + A
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIA 131
Query: 125 LESLNGVELEGRAMRVSLA 143
L++LNG ++E ++++ A
Sbjct: 132 LQTLNGKQIENNIVKINWA 150
>gi|349580919|dbj|GAA26078.1| K7_Pub1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 453
Score = 88.6 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 89/145 (61%), Gaps = 4/145 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + ++ D+ ++ +AFV D N ++ L+G++ I+++N++ + +
Sbjct: 101 IANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQS--- 156
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
++ F LFVG+L+ +V E+L AF+++ + + V++D ++G SRGYGFV ++++ +
Sbjct: 157 SSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDA 216
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
+ A++S+ G +L GR +R++ A R
Sbjct: 217 QNAMDSMQGQDLNGRPLRINWAAKR 241
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+D L+VGNL ++T + L Q FQ G + +++ D ++ ++ Y FV Y + A
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIA 131
Query: 125 LESLNGVELEGRAMRVSLA 143
L++LNG ++E ++++ A
Sbjct: 132 LQTLNGKQIENNIVKINWA 150
>gi|323335711|gb|EGA76992.1| Pub1p [Saccharomyces cerevisiae Vin13]
Length = 453
Score = 88.6 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 89/145 (61%), Gaps = 4/145 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + ++ D+ ++ +AFV D N ++ L+G++ I+++N++ + +
Sbjct: 101 IANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQS--- 156
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
++ F LFVG+L+ +V E+L AF+++ + + V++D ++G SRGYGFV ++++ +
Sbjct: 157 SSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDA 216
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
+ A++S+ G +L GR +R++ A R
Sbjct: 217 QNAMDSMQGQDLNGRPLRINWAAKR 241
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+D L+VGNL ++T + L Q FQ G + +++ D ++ ++ Y FV Y + A
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIA 131
Query: 125 LESLNGVELEGRAMRVSLA 143
L++LNG ++E ++++ A
Sbjct: 132 LQTLNGKQIENNIVKINWA 150
>gi|6324312|ref|NP_014382.1| Pub1p [Saccharomyces cerevisiae S288c]
gi|308153665|sp|P32588.4|PUB1_YEAST RecName: Full=Nuclear and cytoplasmic polyadenylated RNA-binding
protein PUB1; AltName: Full=ARS consensus-binding
protein ACBP-60; AltName: Full=Poly uridylate-binding
protein; Short=Poly(U)-binding protein
gi|1301841|emb|CAA95877.1| PUB1 [Saccharomyces cerevisiae]
gi|285814634|tpg|DAA10528.1| TPA: Pub1p [Saccharomyces cerevisiae S288c]
gi|392296972|gb|EIW08073.1| Pub1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 453
Score = 88.6 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 89/145 (61%), Gaps = 4/145 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + ++ D+ ++ +AFV D N ++ L+G++ I+++N++ + +
Sbjct: 101 IANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQS--- 156
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
++ F LFVG+L+ +V E+L AF+++ + + V++D ++G SRGYGFV ++++ +
Sbjct: 157 SSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDA 216
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
+ A++S+ G +L GR +R++ A R
Sbjct: 217 QNAMDSMQGQDLNGRPLRINWAAKR 241
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+D L+VGNL ++T + L Q FQ G + +++ D ++ ++ Y FV Y + A
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIA 131
Query: 125 LESLNGVELEGRAMRVSLA 143
L++LNG ++E ++++ A
Sbjct: 132 LQTLNGKQIENNIVKINWA 150
>gi|295646|gb|AAC37348.1| RNA-binding protein [Saccharomyces cerevisiae]
gi|311124|gb|AAC37364.1| poly(A)-binding protein [Saccharomyces cerevisiae]
gi|151944515|gb|EDN62793.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|190409011|gb|EDV12276.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
gi|207341619|gb|EDZ69624.1| YNL016Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256274171|gb|EEU09080.1| Pub1p [Saccharomyces cerevisiae JAY291]
gi|259148933|emb|CAY82177.1| Pub1p [Saccharomyces cerevisiae EC1118]
gi|323346726|gb|EGA81007.1| Pub1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352444|gb|EGA84945.1| Pub1p [Saccharomyces cerevisiae VL3]
Length = 453
Score = 88.6 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 89/145 (61%), Gaps = 4/145 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + ++ D+ ++ +AFV D N ++ L+G++ I+++N++ + +
Sbjct: 101 IANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQS--- 156
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
++ F LFVG+L+ +V E+L AF+++ + + V++D ++G SRGYGFV ++++ +
Sbjct: 157 SSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDA 216
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
+ A++S+ G +L GR +R++ A R
Sbjct: 217 QNAMDSMQGQDLNGRPLRINWAAKR 241
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+D L+VGNL ++T + L Q FQ G + +++ D ++ ++ Y FV Y + A
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIA 131
Query: 125 LESLNGVELEGRAMRVSLA 143
L++LNG ++E ++++ A
Sbjct: 132 LQTLNGKQIENNIVKINWA 150
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 10/146 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
V DR TG+SRGF +V +T E G+E GR +R++ S PK +
Sbjct: 238 VQLDRTTGKSRGFGYVDFATAAAAKKAFEEGQGKEVDGRAIRLDLS-TPKGDVTENRAKK 296
Query: 67 FK---------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
F LF+GNLS+ ++ + + AF E+G V G R+ D +SGR +G+G+V ++
Sbjct: 297 FNDQRSAPSSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAA 356
Query: 118 KAEMETALESLNGVELEGRAMRVSLA 143
+ + AL+++ G EL GR +R+ +
Sbjct: 357 QESAQAALDAMTGQELAGRPLRLDFS 382
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+++VG LSW+V + L + +G V ARV D +G+SRG+G+V ++T A + A E
Sbjct: 208 QVWVGQLSWNVDNDWLKSEMEVFGEVTSARVQLDRTTGKSRGFGYVDFATAAAAKKAFEE 267
Query: 128 LNGVELEGRAMRVSLA 143
G E++GRA+R+ L+
Sbjct: 268 GQGKEVDGRAIRLDLS 283
>gi|302679630|ref|XP_003029497.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune H4-8]
gi|300103187|gb|EFI94594.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune H4-8]
Length = 174
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 59/79 (74%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSW+ T ++L QAF +G V+ + V+ D E+GRSRG+GFV +S+ E E+A+ S
Sbjct: 4 KVYVGNLSWNTTDDTLRQAFSNFGQVLDSIVMRDRETGRSRGFGFVTFSSSGEAESAISS 63
Query: 128 LNGVELEGRAMRVSLAQGR 146
LN EL+GR ++V+LA R
Sbjct: 64 LNEQELDGRRIKVNLANAR 82
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V+ DRETGRSRGF FVT S+ + + I +L+ +E GR ++VN ++
Sbjct: 34 VMRDRETGRSRGFGFVTFSSSGEAESAISSLNEQELDGRRIKVNLAN 80
>gi|357165665|ref|XP_003580455.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like isoform 1
[Brachypodium distachyon]
gi|357165668|ref|XP_003580456.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like isoform 2
[Brachypodium distachyon]
Length = 286
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 76/131 (58%), Gaps = 7/131 (5%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD---KP-KPKLPLYAETDF 67
+ GR RGFAFVTM + E+ A +E + + +GRI++V FS KP P++P
Sbjct: 115 KDGRKRGFAFVTMGSAEEAAAAVEKFNSYDVMGRIIKVEFSKTFRKPAPPRIPSTIFARH 174
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+V NL+W + + F ++ N + A V++D + +S GYGFV + TK + E AL
Sbjct: 175 KLYVSNLAWKARSSDIKAFFSQF-NPISANVVFDDK--KSAGYGFVSFQTKEDAEAALSE 231
Query: 128 LNGVELEGRAM 138
LNG EL R +
Sbjct: 232 LNGKELLERPV 242
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+V NL W++ + + F E G V +V+ + GR RG+ FV + E A+E
Sbjct: 82 LYVANLPWTLPAVEIEKLFAECGVVKDVQVI-KMKDGRKRGFAFVTMGSAEEAAAAVEKF 140
Query: 129 NGVELEGRAMRVSLAQ 144
N ++ GR ++V ++
Sbjct: 141 NSYDVMGRIIKVEFSK 156
>gi|168054272|ref|XP_001779556.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669037|gb|EDQ55632.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 84
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 54/76 (71%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNLSW +L F +YG VV AR+ YD +SGRSRG+GFV S + E+ TA+E+
Sbjct: 2 KLFVGNLSWGCDETALESLFSDYGRVVEARIAYDKDSGRSRGFGFVTLSNETEVNTAIEN 61
Query: 128 LNGVELEGRAMRVSLA 143
L+G E + R +RV+LA
Sbjct: 62 LDGAEFDARQLRVNLA 77
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-DKPKPK 58
+ YD+++GRSRGF FVT+S + N IENLDG E+ R LRVN + DKP P+
Sbjct: 32 IAYDKDSGRSRGFGFVTLSNETEVNTAIENLDGAEFDARQLRVNLAGDKPAPR 84
>gi|401885117|gb|EJT49245.1| hypothetical protein A1Q1_01645 [Trichosporon asahii var. asahii
CBS 2479]
Length = 333
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 19/148 (12%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVI---ENLDGREYLGRILRVNFSDKPKPK 58
+ T++ D TGRSRGFAF+T +V AV+ LDG+ + I R
Sbjct: 15 IDNCTIMRD-PTGRSRGFAFLTFKSVSSVEAVLAKDHQLDGK--MRAIPRAEH------- 64
Query: 59 LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
E K+FVG L+ SVT++SL Q +YG V+ A V++D +GRS+G+ F ++ +
Sbjct: 65 -----ERTAKVFVGGLAPSVTSDSLKQFLSQYGKVMDATVMFDRLNGRSKGFAFATFADE 119
Query: 119 AEMETALESLNGVELEGRAMRVSLAQGR 146
+ +E A++ +GVELEGR + + AQ R
Sbjct: 120 SGVENAMQH-SGVELEGRQIEIKKAQPR 146
>gi|75319742|sp|Q43472.1|GRP_HORVU RecName: Full=Glycine-rich RNA-binding protein blt801; AltName:
Full=Low temperature-responsive RNA-binding protein
gi|1229138|gb|AAB07749.1| low temperature-responsive RNA-binding protein [Hordeum vulgare
subsp. vulgare]
Length = 161
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 62/86 (72%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ FVG L W+ +SL AF +YG+V+ ++++ D E+GRSRG+GFV +++ M
Sbjct: 2 ADVEYRCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMR 61
Query: 123 TALESLNGVELEGRAMRVSLAQGRRS 148
A+E++NG +L+GR + V+ AQ RRS
Sbjct: 62 QAIEAMNGQDLDGRNITVNEAQSRRS 87
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT ++ E IE ++G++ GR + VN
Sbjct: 37 IITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVN 80
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 14/149 (9%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK- 68
DR++GRSRGF +V +T + + G+E GR LRV+ P+ AE+ K
Sbjct: 428 DRDSGRSRGFGYVDFATSAEALRASKEAHGKELDGRALRVDLQPARGPQD--RAESRAKH 485
Query: 69 -----------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
LF+G L+W++T + + AF E+G V G R+ + +SGR +G+G+V + +
Sbjct: 486 FKDERSAPSNTLFIGGLAWALTEDDIWNAFAEFGEVTGVRLPKEIDSGRPKGFGYVEFVS 545
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQGR 146
+ ALE++NG L GR +R+ A R
Sbjct: 546 QDNAAKALETMNGQALGGRPIRIDFAGKR 574
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 53/78 (67%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG LSW+V + L F++YG V+ ARV D +SGRSRG+G+V ++T AE A +
Sbjct: 396 LWVGQLSWNVDNDWLKSEFEQYGTVLDARVQCDRDSGRSRGFGYVDFATSAEALRASKEA 455
Query: 129 NGVELEGRAMRVSLAQGR 146
+G EL+GRA+RV L R
Sbjct: 456 HGKELDGRALRVDLQPAR 473
>gi|255934068|ref|XP_002558315.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582934|emb|CAP81139.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 496
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/134 (35%), Positives = 73/134 (54%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVG 72
T + + FV ++ L+GR +RVN++ + F +FVG
Sbjct: 129 TTKGHNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQSNSTSKEDTSNHFHIFVG 188
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
+LS V E LTQAF +G+V ARV++D ++GRSRGYGFV + +AE + AL S++G
Sbjct: 189 DLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRAEADKALNSMDGEW 248
Query: 133 LEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 249 LGSRAIRCNWANQK 262
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV + + + ++DG E+LG R +R N+++ K +P +
Sbjct: 209 VSEARVMWDMKTGRSRGYGFVAFRDRAEADKALNSMDG-EWLGSRAIRCNWANQKGQPSI 267
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 268 SQQQALVAMGMTPTTPFGHHHFPTHGIQSYDMVAQQTPQWQTTCYVGNLTPYTTQNDLVP 327
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G V+ R+ D RG+ FV + +A+ LNG + GR ++ S +
Sbjct: 328 LFQNFGYVLETRLQAD------RGFAFVKMDSHENAASAICQLNGYNVNGRPLKCSWGKD 381
Query: 146 R 146
R
Sbjct: 382 R 382
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE-SGRSRGYGFVCYSTKAEMETALES 127
L+VG L VT + L Q F+ G+VV +++ D + + YGFV + E A+++
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFTTKGHNYGFVEFDDPGAAERAMQT 152
Query: 128 LNGVELEGRAMRVSLA 143
LNG + +RV+ A
Sbjct: 153 LNGRRIHQSEIRVNWA 168
>gi|222837999|gb|EEE76364.1| predicted protein [Populus trichocarpa]
Length = 121
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 71/116 (61%), Gaps = 7/116 (6%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ V+ +R+TGRS+GF FV M + + A I+ L G+ GR L VN + +P+ PL
Sbjct: 7 VNSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGLHGQNRGGRDLVVNEARPMEPRAPL 66
Query: 62 YAETDF----KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
+F KL+VGNL + V L QAF ++G V ARV+ + ++GRS+G+GFV
Sbjct: 67 ---EEFLMGNKLYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFV 119
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 87 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
F E+G V A+V+ + ++GRS+G+GFV + AE + A++ L+G GR + V+ A+
Sbjct: 1 FSEFGAVNSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGLHGQNRGGRDLVVNEAR 58
>gi|125549538|gb|EAY95360.1| hypothetical protein OsI_17193 [Oryza sativa Indica Group]
Length = 290
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 75/129 (58%), Gaps = 4/129 (3%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD---KPKPKLPLYAETDFKLFVGNLS 75
FAFVTM+T E+ A +E L+ + +GR +RV FS KP P P KL+V NL
Sbjct: 122 FAFVTMATAEEAAAAVEKLNSLDVMGRTIRVEFSKSFRKPAPPPPGTILERHKLYVSNLP 181
Query: 76 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 135
W ++ + ++ N + A+V++D SG+S GYGFV + TK E E AL L+G EL G
Sbjct: 182 WKARAPNMKEFCSKF-NPLSAKVVFDSPSGKSAGYGFVSFGTKEEAEAALTELDGKELMG 240
Query: 136 RAMRVSLAQ 144
R +R+ Q
Sbjct: 241 RPVRLRWRQ 249
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF 51
V++D +G+S G+ FV+ T E+ A + LDG+E +GR +R+ +
Sbjct: 203 VVFDSPSGKSAGYGFVSFGTKEEAEAALTELDGKELMGRPVRLRW 247
>gi|385808713|ref|YP_005845109.1| RRM domain RNA-binding protein [Ignavibacterium album JCM 16511]
gi|383800761|gb|AFH47841.1| RRM domain RNA-binding protein [Ignavibacterium album JCM 16511]
Length = 83
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 59/79 (74%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG+L WSV E+L + F+E+GNVV A+V+ D E+GRSRG+GFV A+ ++A+E+
Sbjct: 4 KLFVGSLPWSVDDETLRETFEEHGNVVSAKVIKDRETGRSRGFGFVEMENSADAKSAIEA 63
Query: 128 LNGVELEGRAMRVSLAQGR 146
LN EL+GR + V+ A+ R
Sbjct: 64 LNDSELKGRNIVVNEAKSR 82
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 27/44 (61%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
V+ DRETGRSRGF FV M D + IE L+ E GR + VN
Sbjct: 34 VIKDRETGRSRGFGFVEMENSADAKSAIEALNDSELKGRNIVVN 77
>gi|357139508|ref|XP_003571323.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 288
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 79/147 (53%), Gaps = 13/147 (8%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIE-----NLDGREYLGRILRVNFSDKPKPKLPLYA- 63
D ETG SRG FVTM ++ + +LDGRE ++ S++ P L A
Sbjct: 135 DPETGISRGCGFVTMRSLAAARTAMNALDGFDLDGREMFVKLASHVVSNRRNPSLSHTAP 194
Query: 64 ------ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
E+ +K++VGNL+WSV + L + F + GN+V R+L D + R+R YGF+ +S+
Sbjct: 195 MKDHIFESPYKIYVGNLAWSVQPQHLRELFTQCGNIVSTRLLTDRKGARNRVYGFLSFSS 254
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQ 144
E++ AL+ LN GR + V A
Sbjct: 255 PEELDAALK-LNNTNFHGRDIIVREAH 280
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 43/76 (56%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+LFV NL + L FQ YG V+ V D E+G SRG GFV + A TA+ +
Sbjct: 102 ELFVCNLPRRCGVDDLLHLFQPYGTVLSVEVSRDPETGISRGCGFVTMRSLAAARTAMNA 161
Query: 128 LNGVELEGRAMRVSLA 143
L+G +L+GR M V LA
Sbjct: 162 LDGFDLDGREMFVKLA 177
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 87/156 (55%), Gaps = 17/156 (10%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF-------SDK 54
+ + V+ DR++GRS+G+ +V + +D +E G R LRV+ +D
Sbjct: 279 IKAVRVITDRDSGRSKGYGYVEFESADDAAKALEARHGYTLDNRELRVDLGTPRAQRNDG 338
Query: 55 PKP------KLPLYAETDFK----LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
P + Y +T + LFVGN+S+ T + +T+ FQEYG++ R+ D E+
Sbjct: 339 QTPQQRSNDRQKQYGDTPSQPSATLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRET 398
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 140
G +G+G+V +S+ E ++A+E+L GV++ GR +R+
Sbjct: 399 GAPKGFGYVEFSSIEEAKSAMENLTGVDIAGRPIRL 434
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW+V E LT+ F+E+G + RV+ D +SGRS+GYG+V + + + ALE+
Sbjct: 255 LFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDRDSGRSKGYGYVEFESADDAAKALEAR 314
Query: 129 NGVELEGRAMRVSLAQGR 146
+G L+ R +RV L R
Sbjct: 315 HGYTLDNRELRVDLGTPR 332
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP 57
++ + + DRETG +GF +V S++E+ + +ENL G + GR +R+++S PKP
Sbjct: 387 INAVRLPTDRETGAPKGFGYVEFSSIEEAKSAMENLTGVDIAGRPIRLDYS-TPKP 441
>gi|356520229|ref|XP_003528766.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 277
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK---------- 54
+ V D ET S+G +VT+ ++ + LDG + GR LRV FS +
Sbjct: 122 VEVCRDAETNESKGCGYVTLGSIYSARNAVAALDGSDVGGRELRVRFSIEMNSKRRSFNK 181
Query: 55 --PKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
K Y E+ KL+VGNL+ +V E L F +GNVV ARVL+D + G SR Y F
Sbjct: 182 MNSSTKRISYYESPHKLYVGNLAKTVRPEQLRDLFSRFGNVVSARVLHDFKQGNSRVYAF 241
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRV 140
+ + ++AE + A+ SLNG E GR + V
Sbjct: 242 LSFQSEAERDAAM-SLNGTEYYGRTLIV 268
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+++V NL L F+ YG ++ V D E+ S+G G+V + A+ +
Sbjct: 94 EVYVCNLPRRCDATYLLDMFRPYGTILSVEVCRDAETNESKGCGYVTLGSIYSARNAVAA 153
Query: 128 LNGVELEGRAMRVSLA 143
L+G ++ GR +RV +
Sbjct: 154 LDGSDVGGRELRVRFS 169
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 10/149 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
V DR +G+SRGF +V +T + G+E GR +R++ S PK +
Sbjct: 244 VQLDRTSGKSRGFGYVDFATAAAAKKAFDEGQGKEVDGRAIRIDLS-TPKGDVTENRAKK 302
Query: 67 FK---------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
F LF+GNLS+ V+ + + AF E+G V G R+ D +SGR +G+G+V ++
Sbjct: 303 FNDQRSAPSSTLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAA 362
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQGR 146
+ + A++++ G EL GR +R+ + R
Sbjct: 363 QESAQAAIDAMTGQELAGRPLRLDFSTPR 391
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+++VG LSW+V + L + +G V ARV D SG+SRG+G+V ++T A + A +
Sbjct: 214 QIWVGQLSWNVDNDWLKSEMEVFGEVTSARVQLDRTSGKSRGFGYVDFATAAAAKKAFDE 273
Query: 128 LNGVELEGRAMRVSLA 143
G E++GRA+R+ L+
Sbjct: 274 GQGKEVDGRAIRIDLS 289
>gi|452989554|gb|EME89309.1| hypothetical protein MYCFIDRAFT_149907 [Pseudocercospora fijiensis
CIRAD86]
Length = 500
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 29/167 (17%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS--------- 52
L + ++ DR++GRS+GF +V ED +E +G E R +R++FS
Sbjct: 271 LKGVRIITDRDSGRSKGFGYVEFENAEDAAKALEAKNGAELDNRAIRLDFSVPRQNNAQN 330
Query: 53 -------------DKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVL 99
DK +E LFVGNLS+ T + + + F+E+G++ G R+
Sbjct: 331 PQQRGQERRQQYGDK-------ASEPSQTLFVGNLSFDATEDMVREYFEEHGSINGIRLP 383
Query: 100 YDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
D ESG +G+G+V + E + A E+L G +L GR MR+ + R
Sbjct: 384 TDRESGAPKGFGYVEMGSIDEAKAAYEALQGADLGGRPMRLDYSTPR 430
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LF+GNLSW+V E LT+ F+E+G + G R++ D +SGRS+G+G+V + + ALE+
Sbjct: 247 LFIGNLSWNVDEEWLTREFEEFGELKGVRIITDRDSGRSKGFGYVEFENAEDAAKALEAK 306
Query: 129 NGVELEGRAMRVSLAQGRRS 148
NG EL+ RA+R+ + R++
Sbjct: 307 NGAELDNRAIRLDFSVPRQN 326
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP 57
+ + DRE+G +GF +V M ++++ A E L G + GR +R+++S P+P
Sbjct: 380 IRLPTDRESGAPKGFGYVEMGSIDEAKAAYEALQGADLGGRPMRLDYST-PRP 431
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 81/150 (54%), Gaps = 11/150 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
V+ DRETGR++GF +V + D +++ E GR L V+FS P+ K A +
Sbjct: 279 VITDRETGRAKGFGYVEFAKAADAAKAQKDMHEYELDGRPLNVDFS-TPRQKPDANARAN 337
Query: 67 ----------FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
LF+GNLS+ T E++ + F EYGNV + D +SG +G+G+V +
Sbjct: 338 KFGDKRSAPSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFG 397
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGR 146
++ E ALE+L G ++ GR +RV A R
Sbjct: 398 SQEEATAALEALQGQDVAGRPLRVDFAAPR 427
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 53/79 (67%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW++ + L + F+ +G +VG RV+ D E+GR++G+G+V ++ A+ A + +
Sbjct: 250 LFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKAADAAKAQKDM 309
Query: 129 NGVELEGRAMRVSLAQGRR 147
+ EL+GR + V + R+
Sbjct: 310 HEYELDGRPLNVDFSTPRQ 328
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 34/51 (66%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
++++++ DR++G +GF +V + E+ A +E L G++ GR LRV+F+
Sbjct: 374 VTRVSLPTDRDSGALKGFGYVDFGSQEEATAALEALQGQDVAGRPLRVDFA 424
>gi|425781065|gb|EKV19047.1| Nucleolin protein Nsr1, putative [Penicillium digitatum PHI26]
Length = 537
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 56/160 (35%), Positives = 92/160 (57%), Gaps = 16/160 (10%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS--------- 52
LS + ++ DRETGRSRGF +V ++ D +E G + GR + ++++
Sbjct: 307 LSGVRIVTDRETGRSRGFGYVEYNSAADAAKAMEAKKGTDLDGRTINLDYAAPRQANTQG 366
Query: 53 -DKPKPKLPLYA-----ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR 106
D+ + + Y E+D LFVGNL +S T ++L + F G+V+G R+ + E+GR
Sbjct: 367 ADRSQDRARSYGDQTSPESD-TLFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGR 425
Query: 107 SRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+G+G+V +S+ E + A +LNG ELEGRA+R+ + R
Sbjct: 426 PKGFGYVQFSSIDEAKAAHAALNGHELEGRAIRLDFSTPR 465
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 55/80 (68%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LF+GNLSW+V E L + F E+G + G R++ D E+GRSRG+G+V Y++ A+ A+E+
Sbjct: 283 LFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRETGRSRGFGYVEYNSAADAAKAMEAK 342
Query: 129 NGVELEGRAMRVSLAQGRRS 148
G +L+GR + + A R++
Sbjct: 343 KGTDLDGRTINLDYAAPRQA 362
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 11/150 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-DKPKPKLPLYAET 65
V DR TG+SRGF FVT ++ E + +E L+G+E GR + ++ S +K + ++
Sbjct: 340 VQMDRNTGKSRGFGFVTFASPEAVDKALE-LNGKEIDGRPINIDKSVEKDQNQVRERRAK 398
Query: 66 DFK---------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
F LFVGNLS+ T + L + F +YG+V R+ D ESGR +G+G+V +
Sbjct: 399 AFGDATSAPSSVLFVGNLSFDATEDQLWEVFSDYGSVKSVRMPTDRESGRPKGFGYVEFE 458
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ A E L G E+ GRA+R+ +Q R
Sbjct: 459 DVESAKKAHEGLAGQEIAGRAVRLDFSQPR 488
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG LSW+V + L F E G VV ARV D +G+SRG+GFV +++ ++ ALE L
Sbjct: 311 IFVGKLSWNVDNDWLESEFAECGEVVSARVQMDRNTGKSRGFGFVTFASPEAVDKALE-L 369
Query: 129 NGVELEGRAMRV 140
NG E++GR + +
Sbjct: 370 NGKEIDGRPINI 381
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 52/155 (33%), Positives = 86/155 (55%), Gaps = 19/155 (12%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
V+ +R T RS+GF +V ++ ED +E + G E GR + V+FS PKP+ P +
Sbjct: 432 VITERGTERSKGFGYVDFASPEDARKAVEAMAGTEIDGRTINVDFS-APKPERPPQEKRS 490
Query: 67 F----------KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
F LF+GNL +S T +S+ +AF EYG++ R+ D E+ R +G+G+V ++
Sbjct: 491 FGQEELSAPTTTLFIGNLPFSATQDSVYEAFSEYGDINSVRLPTDPETERIKGFGYVEFA 550
Query: 117 TKAEMETALESLN-----GVELEGRAMRVSLAQGR 146
T+ E A ++N G+ ++ R R+ +Q R
Sbjct: 551 TQ---EAATAAVNVGRGDGIYIDQRQARLDYSQPR 582
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 63 AETDFK-LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
A D K LFVG LSW+V + L + F+++G V+ ARV+ + + RS+G+G+V +++ +
Sbjct: 396 ASGDIKNLFVGGLSWNVDDDWLKKEFEKFGEVISARVITERGTERSKGFGYVDFASPEDA 455
Query: 122 ETALESLNGVELEGRAMRVSLA 143
A+E++ G E++GR + V +
Sbjct: 456 RKAVEAMAGTEIDGRTINVDFS 477
>gi|115441831|ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|2624328|emb|CAA05729.1| OsGRP2 [Oryza sativa Japonica Group]
gi|19386753|dbj|BAB86134.1| OsGRP2 [Oryza sativa Japonica Group]
gi|20805007|dbj|BAB92683.1| OsGRP2 [Oryza sativa Japonica Group]
gi|113534726|dbj|BAF07109.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|125528847|gb|EAY76961.1| hypothetical protein OsI_04919 [Oryza sativa Indica Group]
gi|125573102|gb|EAZ14617.1| hypothetical protein OsJ_04542 [Oryza sativa Japonica Group]
gi|215765299|dbj|BAG86996.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768370|dbj|BAH00599.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 150
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 59/79 (74%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LSW+ +SL +AF +G+V ARV+ D ESGRSRG+GFV ++ + ++A+++
Sbjct: 38 KLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKSAMDA 97
Query: 128 LNGVELEGRAMRVSLAQGR 146
++G ELEGR++RV+ A R
Sbjct: 98 MDGKELEGRSIRVNFANER 116
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 40/56 (71%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP 57
+++ V+ DRE+GRSRGF FV+ + +D + ++ +DG+E GR +RVNF+++ P
Sbjct: 63 VTEARVINDRESGRSRGFGFVSFANGDDAKSAMDAMDGKELEGRSIRVNFANERPP 118
>gi|399931797|gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana clevelandii]
Length = 144
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LSW +SL AF +G+VV ARV+ D +SGRSRG+GFV +S A+++
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKA 98
Query: 128 LNGVELEGRAMRVSLAQGR 146
++G EL+GR +RVS+AQ R
Sbjct: 99 MDGQELQGRNIRVSIAQER 117
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+ DR++GRSRGF FV S E N I+ +DG+E GR +RV+ + + P+
Sbjct: 69 VIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQERAPR 120
>gi|409044525|gb|EKM54006.1| hypothetical protein PHACADRAFT_257571 [Phanerochaete carnosa
HHB-10118-sp]
Length = 155
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 59/79 (74%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSW+ T +SL AF ++G ++ + V+ D ++GRSRG+GFV +S+ E +TA+ S
Sbjct: 4 KVYVGNLSWNTTDDSLRTAFSQFGQILDSIVMRDRDTGRSRGFGFVTFSSANEAQTAITS 63
Query: 128 LNGVELEGRAMRVSLAQGR 146
LN EL+GR +RV+LA R
Sbjct: 64 LNEQELDGRRIRVNLANAR 82
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V+ DR+TGRSRGF FVT S+ + I +L+ +E GR +RVN ++
Sbjct: 34 VMRDRDTGRSRGFGFVTFSSANEAQTAITSLNEQELDGRRIRVNLAN 80
>gi|399931807|gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]
Length = 144
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LSW +SL AF +G+VV ARV+ D +SGRSRG+GFV +S A+++
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKA 98
Query: 128 LNGVELEGRAMRVSLAQGR 146
++G EL+GR +RVS+AQ R
Sbjct: 99 MDGQELQGRNIRVSIAQER 117
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+ DR++GRSRGF FV S E N I+ +DG+E GR +RV+ + + P+
Sbjct: 69 VIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQERAPR 120
>gi|399931799|gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
Length = 144
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LSW +SL AF +G+VV ARV+ D +SGRSRG+GFV +S A+++
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKA 98
Query: 128 LNGVELEGRAMRVSLAQGR 146
++G EL+GR +RVS+AQ R
Sbjct: 99 MDGQELQGRNIRVSIAQER 117
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+ DR++GRSRGF FV S E N I+ +DG+E GR +RV+ + + P+
Sbjct: 69 VIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQERAPR 120
>gi|392570008|gb|EIW63181.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 126
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 58/79 (73%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSW+ T +SL AF YG ++ + V+ D ++GRSRG+GFV +S+ E +TA+ S
Sbjct: 4 KVYVGNLSWNTTDDSLRSAFSNYGQILDSIVMRDRDTGRSRGFGFVTFSSSGEAQTAISS 63
Query: 128 LNGVELEGRAMRVSLAQGR 146
LN EL+GR ++V+LA R
Sbjct: 64 LNEQELDGRRIKVNLANAR 82
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V+ DR+TGRSRGF FVT S+ + I +L+ +E GR ++VN ++
Sbjct: 34 VMRDRDTGRSRGFGFVTFSSSGEAQTAISSLNEQELDGRRIKVNLAN 80
>gi|340914665|gb|EGS18006.1| hypothetical protein CTHT_0060190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 539
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 83/157 (52%), Gaps = 16/157 (10%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP----------- 55
V+ D+++ RSRGF +V ++ + +G GR +R++F+ KP
Sbjct: 336 VVTDKDSRRSRGFGYVDFTSPDAAEKAYNEKNGAHLQGREMRLDFASKPAEGNDPTTRAA 395
Query: 56 ----KPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
K + E+D LFVGNLS++ T ES+++ F V R+ D ESGR +G+
Sbjct: 396 ERARKHGDVISPESDT-LFVGNLSFNATEESVSEFFNSVAAVQSLRIPTDQESGRPKGFA 454
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+V +++ + +TA LNG L+GR +R+ A+ R S
Sbjct: 455 YVTFNSVEDAKTAFNQLNGSNLDGRPVRLDFAKPRDS 491
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNL W+V ++L + F+ +V ARV+ D +S RSRG+G+V +++ E A
Sbjct: 307 LWVGNLGWAVDDKALYEEFENCEGIVSARVVTDKDSRRSRGFGYVDFTSPDAAEKAYNEK 366
Query: 129 NGVELEGRAMRVSLA 143
NG L+GR MR+ A
Sbjct: 367 NGAHLQGREMRLDFA 381
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK 56
L + D+E+GR +GFA+VT ++VED L+G GR +R++F+ KP+
Sbjct: 439 LRIPTDQESGRPKGFAYVTFNSVEDAKTAFNQLNGSNLDGRPVRLDFA-KPR 489
>gi|326496905|dbj|BAJ98479.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 76/129 (58%), Gaps = 7/129 (5%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD---KP-KPKLPLYAETDFKL 69
GR RGFAFVTM+T E+ AV+E DG + GR+++V FS KP P P +KL
Sbjct: 97 GRKRGFAFVTMATAEEAAAVVEKFDGHDINGRVIKVEFSKSFRKPAPPSSPDTIVAKYKL 156
Query: 70 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 129
+V NL+W + L + F ++ N V A +++D +S GYGFV + TK E E AL LN
Sbjct: 157 YVSNLAWKARSADLKEFFSQF-NPVSANIVFDDR--KSAGYGFVSFGTKEEAEAALSELN 213
Query: 130 GVELEGRAM 138
G EL R +
Sbjct: 214 GKELMERPV 222
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
ET KLFVGN+ ++ + + F E G V V+ + GR RG+ FV +T E
Sbjct: 57 ETRRKLFVGNMPFTFSAAETEKLFAECGVVKDVEVI-KMKDGRKRGFAFVTMATAEEAAA 115
Query: 124 ALESLNGVELEGRAMRVSLAQGRR 147
+E +G ++ GR ++V ++ R
Sbjct: 116 VVEKFDGHDINGRVIKVEFSKSFR 139
>gi|399931811|gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
Length = 144
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LSW +SL AF +G+VV ARV+ D +SGRSRG+GFV +S A+++
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKA 98
Query: 128 LNGVELEGRAMRVSLAQGR 146
++G EL+GR +RVS+AQ R
Sbjct: 99 MDGQELQGRNIRVSIAQER 117
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+ DR++GRSRGF FV S E N I+ +DG+E GR +RV+ + + P+
Sbjct: 69 VIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQERAPR 120
>gi|255939157|ref|XP_002560348.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584970|emb|CAP83009.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 507
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 55/159 (34%), Positives = 93/159 (58%), Gaps = 15/159 (9%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS--------- 52
LS + ++ DRE+GRSRGF +V ++ D +E G + GR + ++++
Sbjct: 278 LSGVRIVTDRESGRSRGFGYVEYTSAADAAKAMEAKKGTDLDGRTINLDYAAPRQANPQQ 337
Query: 53 DKPKPKLPLYA-----ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS 107
D+ + + Y E+D LFVGNL +S T ++L + F +G+V+G R+ + E+GR
Sbjct: 338 DRTQDRARSYGDQTSPESD-TLFVGNLPFSATEDALHEVFGAHGSVLGIRLPTEQETGRP 396
Query: 108 RGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+G+G+V +S+ E + A +LNG ELEGRA+R+ + R
Sbjct: 397 KGFGYVQFSSIDEAKAAHGALNGHELEGRAVRLDFSTPR 435
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 55/80 (68%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LF+GNLSW+V E L + F E+G + G R++ D ESGRSRG+G+V Y++ A+ A+E+
Sbjct: 254 LFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRESGRSRGFGYVEYTSAADAAKAMEAK 313
Query: 129 NGVELEGRAMRVSLAQGRRS 148
G +L+GR + + A R++
Sbjct: 314 KGTDLDGRTINLDYAAPRQA 333
>gi|326503644|dbj|BAJ86328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 285
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 76/129 (58%), Gaps = 7/129 (5%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD---KP-KPKLPLYAETDFKL 69
GR RGFAFVTM+T E+ AV+E DG + GR+++V FS KP P P +KL
Sbjct: 116 GRKRGFAFVTMATAEEAAAVVEKFDGHDINGRVIKVEFSKSFRKPAPPSSPDTIVAKYKL 175
Query: 70 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 129
+V NL+W + L + F ++ N V A +++D +S GYGFV + TK E E AL LN
Sbjct: 176 YVSNLAWKARSADLKEFFSQF-NPVSANIVFDDR--KSAGYGFVSFGTKEEAEAALSELN 232
Query: 130 GVELEGRAM 138
G EL R +
Sbjct: 233 GKELMERPV 241
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
ET KLFVGN+ ++ + + F E G V V+ + GR RG+ FV +T E
Sbjct: 76 ETRRKLFVGNMPFTFSAAETEKLFAECGVVKDVEVI-KMKDGRKRGFAFVTMATAEEAAA 134
Query: 124 ALESLNGVELEGRAMRVSLAQGRR 147
+E +G ++ GR ++V ++ R
Sbjct: 135 VVEKFDGHDINGRVIKVEFSKSFR 158
>gi|346322022|gb|EGX91621.1| ribosome biogenesis protein Nop4 [Cordyceps militaris CM01]
Length = 818
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 79/152 (51%), Gaps = 17/152 (11%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD------------ 53
TV+ D++T SRGF FVT++ +D LD +++ GR +RV ++
Sbjct: 72 TVVVDQQTKESRGFGFVTLADADDAKQAQTVLDKKQWEGRSIRVEVAEPRQRKELAEGAE 131
Query: 54 -KPKPKLPLYAETDFKLFVGNLSWSV-TTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
+ KP P + T KL V NL WS+ +E L F+ YG + A + D G+ +G+G
Sbjct: 132 RRQKPGKPEFEPTP-KLIVRNLPWSIRNSEQLGHLFRSYGRIKFADLPKD--KGKLKGFG 188
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
FV K E ALE +NG E++GR + V A
Sbjct: 189 FVTLRGKKNAENALEGVNGKEIDGRTLAVDWA 220
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 55 PKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
P PK E LFV +L +VT ESL + F EY V A V+ D ++ SRG+GFV
Sbjct: 31 PSPK-KARTEERRSLFVRSLPPNVTNESLAEFFSEYFPVKHATVVVDQQTKESRGFGFVT 89
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLAQGRR 147
+ + + A L+ + EGR++RV +A+ R+
Sbjct: 90 LADADDAKQAQTVLDKKQWEGRSIRVEVAEPRQ 122
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
+FV NL ++ E L F +GN+ ARV+ D + R G FVC+
Sbjct: 319 IFVRNLPFTTNDEKLKSFFSSFGNIRYARVVMDKATDRPAGTAFVCF 365
>gi|125563035|gb|EAZ08415.1| hypothetical protein OsI_30679 [Oryza sativa Indica Group]
Length = 226
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+ + V++D+ TGRSR F FVTMST E+ NA IE+L+ E GR ++VN ++ P +
Sbjct: 96 VERAEVMFDKYTGRSRRFGFVTMSTPEEANAAIESLNETEVGGRKIKVNVTESFLPNIDR 155
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
A +FV +Q G V+ A V + +S+GYGFV +S++ E+
Sbjct: 156 SAPEPEPVFVD-----------SQYRFTLGEVLSATVSRIPGTAKSKGYGFVTFSSEEEV 204
Query: 122 ETALESLNGVELEGRAMRVSLA 143
E A+ + N ELEG+ +RV+ A
Sbjct: 205 EAAVSTFNNAELEGQPIRVNKA 226
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGN+ +VT + L F ++G V A V++D +GRSR +GFV ST E A+ES
Sbjct: 71 KLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEANAAIES 130
Query: 128 LNGVELEGRAMRVSLAQ 144
LN E+ GR ++V++ +
Sbjct: 131 LNETEVGGRKIKVNVTE 147
>gi|149240785|ref|XP_001526223.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450346|gb|EDK44602.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 601
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 79/132 (59%), Gaps = 12/132 (9%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP-------KPKLPLYAETDFKLFV 71
+AF+ + ED + +L+G++ G ++VN++ + P+ P Y +FV
Sbjct: 143 YAFIEFNESEDAEKALNSLNGKDVNGSDIKVNWAYQSAAIAGGSTPEEPSY-----NIFV 197
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS V E+L +AF ++G++ A V++D ++ RSRGYGFV + + + E AL+S+NG
Sbjct: 198 GDLSSEVNDEALKKAFTKFGSLKQAHVMWDMQTSRSRGYGFVTFGKQEDAENALQSMNGE 257
Query: 132 ELEGRAMRVSLA 143
L GRA+R + A
Sbjct: 258 WLGGRAIRCNWA 269
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNL+ S + E + + F N + + L + ++ Y F+ ++ + E AL SL
Sbjct: 102 LYVGNLAKSASEEQINEIFSSVSNPIKSIKLLNDKNKLGFNYAFIEFNESEDAEKALNSL 161
Query: 129 NGVELEGRAMRVSLA 143
NG ++ G ++V+ A
Sbjct: 162 NGKDVNGSDIKVNWA 176
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
L + V++D +T RSRG+ FVT ED +++++G GR +R N++
Sbjct: 219 LKQAHVMWDMQTSRSRGYGFVTFGKQEDAENALQSMNGEWLGGRAIRCNWA 269
>gi|452986364|gb|EME86120.1| hypothetical protein MYCFIDRAFT_52503 [Pseudocercospora fijiensis
CIRAD86]
Length = 482
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/134 (36%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 15 RSRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVG 72
+S+G+ FV ++ L+GR + +RVN++ + F +FVG
Sbjct: 119 QSKGYNYGFVEYDDPGAAERAMQTLNGRRVHQQEIRVNWAYQSNTATKEDTSNHFHIFVG 178
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
+LS V E L QAF +GNV ARV++D ++GRSRGYGFV + + E E AL S++G
Sbjct: 179 DLSNEVNDEVLLQAFSAFGNVSEARVMWDMKTGRSRGYGFVAFRDRGEAEKALSSMDGEW 238
Query: 133 LEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 239 LGSRAIRCNWANQK 252
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 45/182 (24%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSDKP----- 55
+S+ V++D +TGRSRG+ FV + + ++DG E+LG R +R N++++
Sbjct: 199 VSEARVMWDMKTGRSRGYGFVAFRDRGEAEKALSSMDG-EWLGSRAIRCNWANQKGQPSF 257
Query: 56 -----------KPKLPLYAETDF--------------------KLFVGNLSWSVTTESLT 84
P P Y F +VGNL+ T L
Sbjct: 258 SQQQAMAQMGMTPTTP-YGHHSFPTQGPQSYETIVSQTPQWQTTCYVGNLTPYTTQNDLV 316
Query: 85 QAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
FQ +G V R D RG+ F+ + A+ L+G ++ GR ++ S +
Sbjct: 317 PLFQNFGYVTETRFQSD------RGFAFIKMDSHENAANAICHLSGYQVNGRPLKCSWGK 370
Query: 145 GR 146
R
Sbjct: 371 DR 372
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 126
L+VG L VT + L Q F+ G+V +++ D ++ +S+G YGFV Y E A++
Sbjct: 83 LYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPD-KNFQSKGYNYGFVEYDDPGAAERAMQ 141
Query: 127 SLNGVELEGRAMRVSLA 143
+LNG + + +RV+ A
Sbjct: 142 TLNGRRVHQQEIRVNWA 158
>gi|83773473|dbj|BAE63600.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 440
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%), Gaps = 19/163 (11%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN----------- 50
LS + ++ +R+TGRSRGF +V + D E E GR + ++
Sbjct: 221 LSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAKRDTEIDGRKINLDYATGRPANREQ 280
Query: 51 --FSDKPKPKLPLY-----AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE 103
F D+ + + + E+D LFVGN+ +S +SL + F + G+++G R+ D E
Sbjct: 281 GGFQDRAQARARSFGDQASPESD-TLFVGNIPFSANEDSLHEVFGQKGSILGIRLPTDPE 339
Query: 104 SGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
SGR +G+G+V +S+ E A LNG E++GR +R+ + R
Sbjct: 340 SGRPKGFGYVQFSSVEEAREAFNELNGAEIDGRPVRLDFSTPR 382
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW+V L F+E+G + G R++ + ++GRSRG+G+V Y+ + A E+
Sbjct: 197 LFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAK 256
Query: 129 NGVELEGRAMRVSLAQGR 146
E++GR + + A GR
Sbjct: 257 RDTEIDGRKINLDYATGR 274
>gi|308475439|ref|XP_003099938.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
gi|308266205|gb|EFP10158.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
Length = 408
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 84/145 (57%), Gaps = 3/145 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP-KPKLP 60
++K +++D G + FAFV S + +++++GR+ L R +RVN++ +P +P
Sbjct: 64 VTKAKIIFDCFQGLNDPFAFVEFSDHNQASQALQSMNGRQLLEREMRVNWAVEPNQPGDR 123
Query: 61 LYAET--DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
ET F +FVG+LS + + L +AF +G V A+++ D + +++GYGFV Y +
Sbjct: 124 NKPETSRHFHVFVGDLSAEIDSTKLREAFLPFGEVSEAKIIRDNATNKAKGYGFVSYPRR 183
Query: 119 AEMETALESLNGVELEGRAMRVSLA 143
+ E A+E +NG L R +R + A
Sbjct: 184 EDAERAIEQMNGQWLGRRTIRTNWA 208
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNL ++T E L F + G V A++++D G + + FV +S + AL+S+
Sbjct: 40 LFVGNLDPAITDEFLATLFNQIGAVTKAKIIFDCFQGLNDPFAFVEFSDHNQASQALQSM 99
Query: 129 NGVELEGRAMRVSLA 143
NG +L R MRV+ A
Sbjct: 100 NGRQLLEREMRVNWA 114
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 79/175 (45%), Gaps = 43/175 (24%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGR-ILRVNFS-------- 52
+S+ ++ D T +++G+ FV+ ED IE ++G ++LGR +R N++
Sbjct: 158 VSEAKIIRDNATNKAKGYGFVSYPRREDAERAIEQMNG-QWLGRRTIRTNWATRKPEEEG 216
Query: 53 ------------DKPKPKLPLY--------------AETDFKLFVGNLSWSVTTESLTQA 86
D+P + A + ++VGN++ S+T + + +
Sbjct: 217 GERRERDRNERGDRPHRGEGRHHHFEKTYDEVFREAAADNTSVYVGNIN-SLTEDEIRRG 275
Query: 87 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 141
F+ +G +V R+ +S+GY FV + K A+ +N ++ G+ +R S
Sbjct: 276 FERFGQIVEVRIF------KSQGYAFVKFEQKESAARAIVQMNNQDVSGQMVRCS 324
>gi|452845910|gb|EME47843.1| hypothetical protein DOTSEDRAFT_167231 [Dothistroma septosporum
NZE10]
Length = 500
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Query: 15 RSRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVG 72
+S+G+ FV ++ L+GR + +RVN++ + F +FVG
Sbjct: 121 QSKGYNYGFVEYDDPGAAERAMQTLNGRRVHQQEIRVNWAYQSNTNTKEDTSNHFHIFVG 180
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
+LS V E L QAF +G V ARV++D ++GRSRGYGFV Y + E E AL S++G
Sbjct: 181 DLSNEVNDEVLLQAFSAFGTVSEARVMWDMKTGRSRGYGFVAYRDRGEAEKALSSMDGEW 240
Query: 133 LEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 241 LGSRAIRCNWANQK 254
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV + + ++DG E+LG R +R N+++ K +P
Sbjct: 201 VSEARVMWDMKTGRSRGYGFVAYRDRGEAEKALSSMDG-EWLGSRAIRCNWANQKGQPSF 259
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P +++ +VGNL+ T L
Sbjct: 260 SQQQAMAQMGMTPTTPYGHHTFPTQGSQSYEMVVNQTPQWQTTCYVGNLTPYTTQNDLVP 319
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G V R D RG+ FV T A+ L+G + GR ++ S +
Sbjct: 320 LFQNFGYVTETRFQSD------RGFAFVKMDTHENAANAICQLSGYNVNGRPLKCSWGKD 373
Query: 146 R 146
R
Sbjct: 374 R 374
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 126
L+VG L VT + L Q F+ G+V +++ D ++ +S+G YGFV Y E A++
Sbjct: 85 LYVGGLDPRVTEDVLKQIFETTGHVQNVKIIPD-KNFQSKGYNYGFVEYDDPGAAERAMQ 143
Query: 127 SLNGVELEGRAMRVSLA 143
+LNG + + +RV+ A
Sbjct: 144 TLNGRRVHQQEIRVNWA 160
>gi|238505292|ref|XP_002383875.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|317151540|ref|XP_001824733.2| nucleolin protein Nsr1 [Aspergillus oryzae RIB40]
gi|220689989|gb|EED46339.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|391872083|gb|EIT81226.1| nuclear localization sequence binding protein [Aspergillus oryzae
3.042]
Length = 525
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%), Gaps = 19/163 (11%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN----------- 50
LS + ++ +R+TGRSRGF +V + D E E GR + ++
Sbjct: 306 LSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAKRDTEIDGRKINLDYATGRPANREQ 365
Query: 51 --FSDKPKPKLPLY-----AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE 103
F D+ + + + E+D LFVGN+ +S +SL + F + G+++G R+ D E
Sbjct: 366 GGFQDRAQARARSFGDQASPESDT-LFVGNIPFSANEDSLHEVFGQKGSILGIRLPTDPE 424
Query: 104 SGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
SGR +G+G+V +S+ E A LNG E++GR +R+ + R
Sbjct: 425 SGRPKGFGYVQFSSVEEAREAFNELNGAEIDGRPVRLDFSTPR 467
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW+V L F+E+G + G R++ + ++GRSRG+G+V Y+ + A E+
Sbjct: 282 LFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAK 341
Query: 129 NGVELEGRAMRVSLAQGR 146
E++GR + + A GR
Sbjct: 342 RDTEIDGRKINLDYATGR 359
>gi|212722916|ref|NP_001132731.1| uncharacterized protein LOC100194217 [Zea mays]
gi|194695242|gb|ACF81705.1| unknown [Zea mays]
gi|413933459|gb|AFW68010.1| responsive to abscisic acid15 [Zea mays]
Length = 96
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 61/84 (72%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ FVG L+W+ + ESL AF YG ++ ++V+ D E+GRSRG+GFV +S++ M
Sbjct: 4 ADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSML 63
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+E++NG EL+GR + V+ AQ R
Sbjct: 64 DAIENMNGKELDGRNITVNQAQSR 87
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
V+ DRETGRSRGF FVT S+ IEN++G+E GR + VN
Sbjct: 39 VITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVN 82
>gi|399931801|gb|AFP57450.1| RNA-binding glycine-rich protein [Nicotiana goodspeedii]
Length = 144
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 7/111 (6%)
Query: 43 LGRILRVNFSDK------PKPK-LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVG 95
LG +LR N S P P L + KLFVG LSW +SL A +G+VV
Sbjct: 7 LGGLLRQNISGNAVSATTPMPSMLDAFRCMSTKLFVGGLSWGTDDQSLRDALATFGDVVD 66
Query: 96 ARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
ARV+ D +SGRSRG+GFV +S A+++++G EL+GR +RV++AQ R
Sbjct: 67 ARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVNIAQER 117
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+ DR++GRSRGF FV S E N I+ +DG+E GR +RVN + + P+
Sbjct: 69 VIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVNIAQERAPR 120
>gi|425768240|gb|EKV06770.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum Pd1]
gi|425770410|gb|EKV08883.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum PHI26]
Length = 482
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 47/134 (35%), Positives = 72/134 (53%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVG 72
T + + FV ++ L+GR +RVN++ + F +FVG
Sbjct: 131 TTKGHNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQSNSTSKEDTSNHFHIFVG 190
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
+LS V E LTQAF +G+V ARV++D ++GRSRGYGFV + + E + AL S++G
Sbjct: 191 DLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRTEADKALNSMDGEW 250
Query: 133 LEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 251 LGSRAIRCNWANQK 264
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV + + + ++DG E+LG R +R N+++ K +P +
Sbjct: 211 VSEARVMWDMKTGRSRGYGFVAFRDRTEADKALNSMDG-EWLGSRAIRCNWANQKGQPSI 269
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 270 SQQQALVAMGMTPTTAFGHHHFPTHGIQSYDMVAQQTPQWQTTCYVGNLTPYTTQNDLVP 329
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G V+ R+ D RG+ FV + +A+ LNG + GR ++ S +
Sbjct: 330 LFQNFGYVLETRLQAD------RGFAFVKMDSHENAASAICQLNGYNVNGRPLKCSWGKD 383
Query: 146 R 146
R
Sbjct: 384 R 384
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE---SGRSRGYGFVCYSTKAEMETAL 125
L+VG L VT + L Q F+ G+VV +++ D + + YGFV + E A+
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNGQFTTKGHNYGFVEFDDPGAAERAM 152
Query: 126 ESLNGVELEGRAMRVSLA 143
++LNG + +RV+ A
Sbjct: 153 QTLNGRRIHQSEIRVNWA 170
>gi|46122079|ref|XP_385593.1| hypothetical protein FG05417.1 [Gibberella zeae PH-1]
Length = 473
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 48/135 (35%), Positives = 72/135 (53%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+ R + FV ++ L+GR +RVN++ + F +FV
Sbjct: 117 KNARGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTTNKEDTSNHFHIFV 176
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS V E LTQAF +G+V ARV++D ++GRSRGYGFV + + E E AL S++G
Sbjct: 177 GDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGE 236
Query: 132 ELEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 237 WLGSRAIRCNWANQK 251
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKP-- 57
+S+ V++D +TGRSRG+ FV + + ++DG E+LG R +R N+++ K +P
Sbjct: 198 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDG-EWLGSRAIRCNWANQKGQPSM 256
Query: 58 --------------------KLPLYAETDFK------------LFVGNLSWSVTTESLTQ 85
+ P + ++ ++VGNL+ T +
Sbjct: 257 AQQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPSWQTTVYVGNLTPYTTPNDVVP 316
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ + A+ +NG + GR ++ S +
Sbjct: 317 LFQNFGFVVESRFQAD------RGFAFIKMDSHENAAMAICQMNGYNVNGRPLKCSWGKD 370
Query: 146 R 146
+
Sbjct: 371 K 371
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L++G L VT E L Q F+ G+V +++ D ++ R YGFV Y E A+++L
Sbjct: 84 LYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPD-KNARGYNYGFVEYDDPGAAERAMQTL 142
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 143 NGRRVHQSEIRVNWA 157
>gi|440635298|gb|ELR05217.1| hypothetical protein GMDG_01655 [Geomyces destructans 20631-21]
Length = 503
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 2/147 (1%)
Query: 2 LSKLTVLYDRETGRSRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL 59
+ + ++ D+ G S+GF FV ++ L+GR +RVN++ +
Sbjct: 115 VQNVKIIPDKNVGASKGFNYGFVEYDDPGAAERAMQTLNGRRVHQAEIRVNWAYQSNTSN 174
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
F +FVG+LS V E L QAF +G+V ARV++D ++GRSRGYGFV + +
Sbjct: 175 KEDTSNHFHIFVGDLSNEVNDEVLLQAFCAFGSVSEARVMWDMKTGRSRGYGFVAFRERQ 234
Query: 120 EMETALESLNGVELEGRAMRVSLAQGR 146
+ E AL S++G L RA+R + A +
Sbjct: 235 DAEKALSSMDGEWLGSRAIRCNWANQK 261
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV +D + ++DG E+LG R +R N+++ K +P +
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 266
Query: 60 P---------LYAETDF-------------------------KLFVGNLSWSVTTESLTQ 85
L T F ++VGNL+ T L
Sbjct: 267 SQQQSMVSTGLTPTTPFGHHHFPTHGVQSYDMIVQQTPQWQTTVYVGNLTPYTTQNDLVP 326
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ FV T A+ L+G + GR ++ S +
Sbjct: 327 LFQNFGYVVETRFQSD------RGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKD 380
Query: 146 R 146
+
Sbjct: 381 K 381
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 126
L+VG L VT + L Q F+ G+V +++ D G S+G YGFV Y E A++
Sbjct: 91 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGASKGFNYGFVEYDDPGAAERAMQ 150
Query: 127 SLNGVELEGRAMRVSLA 143
+LNG + +RV+ A
Sbjct: 151 TLNGRRVHQAEIRVNWA 167
>gi|393245114|gb|EJD52625.1| hypothetical protein AURDEDRAFT_111257 [Auricularia delicata
TFB-10046 SS5]
Length = 103
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 61/81 (75%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSW+ T E+L AFQ++G ++ + V+ D ++GRSRG+GFV + + E ++A+++
Sbjct: 4 KVYVGNLSWNTTDETLRSAFQDFGQILDSIVMRDRDTGRSRGFGFVTFGSPQEADSAIQA 63
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
LN EL+GR ++V+LA R S
Sbjct: 64 LNDQELDGRRIKVNLANARPS 84
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 34/47 (72%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V+ DR+TGRSRGF FVT + ++ ++ I+ L+ +E GR ++VN ++
Sbjct: 34 VMRDRDTGRSRGFGFVTFGSPQEADSAIQALNDQELDGRRIKVNLAN 80
>gi|222639809|gb|EEE67941.1| hypothetical protein OsJ_25829 [Oryza sativa Japonica Group]
Length = 164
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIE-----NLDGREYLGRI--------LRVNFSDKPK 56
D ETG SRG FVTM ++ + + +LDGRE L ++ +N + P
Sbjct: 13 DPETGLSRGCGFVTMRSLPEARTAMNALDGFDLDGREMLVKLSSDVVSKRRNINMTHTPP 72
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
K ++ E+ K++VGN++WSV + L + F + G VV R+L D + GR R YGF+ ++
Sbjct: 73 VKDHIF-ESPHKIYVGNIAWSVEPQELREYFSQCGTVVSTRLLTDRKGGRGRVYGFLSFA 131
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGRR 147
+ E+E AL+ L+ GR + V A R
Sbjct: 132 SAEELEAALK-LDNTHFHGRNILVRQAHEER 161
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 53/150 (35%), Positives = 82/150 (54%), Gaps = 11/150 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
V+ DRETGR++GF +V + D +++ E GR L V+FS P+ K A +
Sbjct: 266 VITDRETGRAKGFGYVEFAKAADAAKAQKDMHEYELDGRPLNVDFS-TPRQKPDANARAN 324
Query: 67 ----------FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
LF+GNLS+ T E++ + F EYGNV + D +SG +G+G+V +
Sbjct: 325 KFGDKRSAPSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFG 384
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGR 146
++ E ALE+L+G ++ GR +RV A R
Sbjct: 385 SQEEATAALEALHGQDVAGRPLRVDFAAPR 414
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 58/94 (61%)
Query: 54 KPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
K K P+ + LFVGNLSW++ + L + F+ +G +VG RV+ D E+GR++G+G+V
Sbjct: 222 KTKTDEPVAEDGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYV 281
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSLAQGRR 147
++ A+ A + ++ EL+GR + V + R+
Sbjct: 282 EFAKAADAAKAQKDMHEYELDGRPLNVDFSTPRQ 315
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 34/51 (66%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
++++++ DR++G +GF +V + E+ A +E L G++ GR LRV+F+
Sbjct: 361 VTRVSLPTDRDSGALKGFGYVDFGSQEEATAALEALHGQDVAGRPLRVDFA 411
>gi|2331133|gb|AAB66885.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 161
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 59/85 (69%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ D++ FVG L+W+ SL AF YG ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVDYRCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRD 64
Query: 124 ALESLNGVELEGRAMRVSLAQGRRS 148
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 65 AIEGMNGKELDGRNITVNEAQSRRS 89
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT S+ + IE ++G+E GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVN 82
>gi|218200393|gb|EEC82820.1| hypothetical protein OsI_27609 [Oryza sativa Indica Group]
Length = 164
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIE-----NLDGREYLGRI--------LRVNFSDKPK 56
D ETG SRG FVTM ++ + + +LDGRE L ++ +N + P
Sbjct: 13 DPETGLSRGCGFVTMRSLPEARTAMNALDGFDLDGREMLVKLSSDVVSKRRNINMTHTPP 72
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
K ++ E+ K++VGN++WSV + L + F + G VV R+L D + GR R YGF+ ++
Sbjct: 73 VKDHIF-ESPHKIYVGNIAWSVEPQELREYFSQCGTVVSTRLLTDRKGGRGRVYGFLSFA 131
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGRR 147
+ E+E AL+ L+ GR + V A R
Sbjct: 132 SAEELEAALK-LDNTHFHGRNILVRQAHEER 161
>gi|241947949|ref|XP_002416697.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
gi|223640035|emb|CAX44279.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
Length = 423
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 11/151 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPKP------KL 59
V+ +R TG+SRG+ +V T +E + G+E GR + ++ S KP +
Sbjct: 227 VIMERATGKSRGYGYVDFETKSAAEKALEEMQGKEIDGRPINLDMSTGKPHASRSTNDRA 286
Query: 60 PLYAETDFKL----FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
Y ++ L FVGNLS++ ++L F EYGNV+ RV ++ + +G+G+V +
Sbjct: 287 KQYGDSQSALSDTLFVGNLSFNANRDNLFTVFGEYGNVISCRVPTHPDTQQPKGFGYVQF 346
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQGR 146
S+ E + ALE+LNG +EGR R+ + R
Sbjct: 347 SSVDEAKAALEALNGEYIEGRPCRLDFSTPR 377
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 52/78 (66%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVG LSW++ L + F+ G V+ ARV+ + +G+SRGYG+V + TK+ E ALE +
Sbjct: 198 LFVGRLSWNIDDSWLKREFEHIGGVISARVIMERATGKSRGYGYVDFETKSAAEKALEEM 257
Query: 129 NGVELEGRAMRVSLAQGR 146
G E++GR + + ++ G+
Sbjct: 258 QGKEIDGRPINLDMSTGK 275
>gi|399931805|gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda]
Length = 144
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 56/79 (70%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LSW +SL AF +G+VV ARV+ D +SGRSRG+GFV +S A+++
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKA 98
Query: 128 LNGVELEGRAMRVSLAQGR 146
++G EL+GR +RV++AQ R
Sbjct: 99 MDGQELQGRNIRVTIAQER 117
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+ DR++GRSRGF FV S E N I+ +DG+E GR +RV + + P+
Sbjct: 69 VIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVTIAQERAPR 120
>gi|42522915|ref|NP_968295.1| RNA-binding protein [Bdellovibrio bacteriovorus HD100]
gi|426403373|ref|YP_007022344.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|39574111|emb|CAE79288.1| putative RNA-binding protein [Bdellovibrio bacteriovorus HD100]
gi|425860041|gb|AFY01077.1| putative RNA-binding protein [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 116
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 55/77 (71%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLS+S+ +SL F E+GNV AR++ D E+GRS+G+ FV ST E TA+
Sbjct: 4 KIYVGNLSYSLDDQSLADTFAEFGNVESARIVIDRETGRSKGFAFVEMSTDDEAATAIAK 63
Query: 128 LNGVELEGRAMRVSLAQ 144
LNGVEL GRAM VS A+
Sbjct: 64 LNGVELMGRAMNVSEAK 80
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
++ DRETGRS+GFAFV MST ++ I L+G E +GR + V+ + KP P
Sbjct: 34 IVIDRETGRSKGFAFVEMSTDDEAATAIAKLNGVELMGRAMNVS---EAKPMAP 84
>gi|169861389|ref|XP_001837329.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|116502051|gb|EAU84946.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 569
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 53/151 (35%), Positives = 82/151 (54%), Gaps = 12/151 (7%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP----- 60
TV DR TG+SRGF +V +TVE +E L+G+E R ++V+ S P
Sbjct: 357 TVQMDRNTGKSRGFGYVHFTTVEAAQKALE-LNGKEIDNRPIKVDISTPRNPDAARQKRA 415
Query: 61 -----LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
+ + LFVGNLS++ + +S+ F +YG V R+ D ESGR +G+G+V +
Sbjct: 416 QTFGDVTSPPSNTLFVGNLSFNTSEDSVWSLFNDYG-VKSVRLPTDRESGRPKGFGYVEF 474
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ A E+ NG +L+GR +R+ +Q R
Sbjct: 475 EDVEGAKKAFEANNGADLDGRPIRLDYSQPR 505
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +FVG LSW+V + L F G + A V D +G+SRG+G+V ++T +
Sbjct: 323 AQQSKAVFVGQLSWNVDNDWLASEFASCGEIESATVQMDRNTGKSRGFGYVHFTTVEAAQ 382
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
ALE LNG E++ R ++V ++ R
Sbjct: 383 KALE-LNGKEIDNRPIKVDISTPR 405
>gi|341900388|gb|EGT56323.1| CBN-TIAR-1 protein [Caenorhabditis brenneri]
Length = 399
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 83/144 (57%), Gaps = 6/144 (4%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++K V++D G + +AFV S + ++ ++ R L R ++VN++ +P + P
Sbjct: 68 VTKTKVIFD---GANDPYAFVEFSDHAQASQALQTMNKRLLLDREMKVNWAVEPG-QQPS 123
Query: 62 YAET--DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+T F +FVG+LS V + L +AFQ +G+V A+V+ D + +S+GYGFV Y +
Sbjct: 124 KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 183
Query: 120 EMETALESLNGVELEGRAMRVSLA 143
E E A+E +NG L R +R + A
Sbjct: 184 EAERAIEQMNGQWLGRRTIRTNWA 207
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 24/159 (15%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFS-----DKP 55
+S V+ D T +S+G+ FV+ E+ IE ++G ++LG R +R N++ D+
Sbjct: 157 VSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG-QWLGRRTIRTNWATRKPGDQE 215
Query: 56 KPKL-------PLYAET---DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG 105
KP +Y +T + ++VGN++ +++ E + QAF YG + R+
Sbjct: 216 KPVHYNEKSYDEIYNQTSGDNTSVYVGNIA-NLSEEDIRQAFASYGRISEVRIF------ 268
Query: 106 RSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+ +GY FV + K A+ +N E+ G+ +R S +
Sbjct: 269 KMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQLVRCSWGK 307
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNL +V+ + + F + G+V +V++DG + Y FV +S A+ AL+++
Sbjct: 44 LYVGNLDPTVSEDFVATLFNQIGSVTKTKVIFDGAND---PYAFVEFSDHAQASQALQTM 100
Query: 129 NGVELEGRAMRVSLA 143
N L R M+V+ A
Sbjct: 101 NKRLLLDREMKVNWA 115
>gi|544423|sp|Q99070.1|GRP2_SORBI RecName: Full=Glycine-rich RNA-binding protein 2
gi|21625|emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 168
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 60/82 (73%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ FVG L+W+ E+L QAF +G V+ ++V+ D E+GRSRG+GFV +S++ M
Sbjct: 4 ADVEYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSML 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E++NG EL+GR + V+ AQ
Sbjct: 64 DAIENMNGKELDGRNITVNQAQ 85
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
V+ DRETGRSRGF FVT S+ + IEN++G+E GR + VN
Sbjct: 39 VITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVN 82
>gi|367020140|ref|XP_003659355.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
gi|347006622|gb|AEO54110.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
Length = 534
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 16/154 (10%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA------ 63
D+++GRSRGF +V + +G GR +R++F+ KP P A
Sbjct: 330 DKDSGRSRGFGYVDFENPDAAEKAYNEKNGAFLQGREMRLDFASKPNADAPPSARAAERA 389
Query: 64 ---------ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
E+D LFVGNL +S +S+++ F + V R+ D ESGR +G+ +V
Sbjct: 390 RKHGDVISPESD-TLFVGNLPFSADEDSVSKFFNKAAKVQSLRIPTDQESGRPKGFAYVT 448
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+S+ + + A E+LNG +L+GR +R+ A+ R S
Sbjct: 449 FSSVEDAKKAFETLNGSDLDGRPVRLDYAKPRDS 482
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/81 (45%), Positives = 48/81 (59%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
+E L+VGNL W V +L + FQ G VVGARV+ D +SGRSRG+G+V + E
Sbjct: 292 SEKSSTLWVGNLGWGVDDNALYEEFQHVGGVVGARVVTDKDSGRSRGFGYVDFENPDAAE 351
Query: 123 TALESLNGVELEGRAMRVSLA 143
A NG L+GR MR+ A
Sbjct: 352 KAYNEKNGAFLQGREMRLDFA 372
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK 56
+ L + D+E+GR +GFA+VT S+VED E L+G + GR +R++++ KP+
Sbjct: 427 VQSLRIPTDQESGRPKGFAYVTFSSVEDAKKAFETLNGSDLDGRPVRLDYA-KPR 480
>gi|365983576|ref|XP_003668621.1| hypothetical protein NDAI_0B03440 [Naumovozyma dairenensis CBS 421]
gi|343767388|emb|CCD23378.1| hypothetical protein NDAI_0B03440 [Naumovozyma dairenensis CBS 421]
Length = 499
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 88/145 (60%), Gaps = 3/145 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + ++ D++ ++ +AFV D N ++ L+G + +I+++N++ + + L
Sbjct: 113 ITDVKIMVDKKN-QNVNYAFVEYLKSHDANVALQTLNGIQIENKIIKINWAFQSQQNLN- 170
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
+ F LFVG+L+ V E+L+ F+ + + + A V++D ++ RSRGYGFV ++ + +
Sbjct: 171 -SNDTFNLFVGDLNIDVDDETLSSNFKNFPSYIQAHVMWDMQTSRSRGYGFVSFADRDQA 229
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
+ A++++ G E+ GR +R++ A R
Sbjct: 230 QNAMDTMQGKEINGRPIRINWATKR 254
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+D L+VGNL S+ + L Q FQ G + +++ D + ++ Y FV Y + A
Sbjct: 85 SDRVLYVGNLDKSINEDLLKQYFQVGGQITDVKIMVD-KKNQNVNYAFVEYLKSHDANVA 143
Query: 125 LESLNGVELEGRAMRVSLA 143
L++LNG+++E + ++++ A
Sbjct: 144 LQTLNGIQIENKIIKINWA 162
>gi|212274941|ref|NP_001130982.1| hypothetical protein [Zea mays]
gi|194690622|gb|ACF79395.1| unknown [Zea mays]
gi|413951564|gb|AFW84213.1| hypothetical protein ZEAMMB73_909652 [Zea mays]
Length = 142
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 50 NFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
D+ P P +D +LFV LSWSV SLT AF +G V R++YD SGRSRG
Sbjct: 32 KLPDELPPGAP-APTSDSRLFVAGLSWSVDERSLTDAFSSFGTVTEVRIMYDKNSGRSRG 90
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+GFV +S E + A ++++G + GR +R+S A GR
Sbjct: 91 FGFVHFSNDNEAKCAKDAMDGKVMLGRPLRISFALGR 127
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
++++ ++YD+ +GRSRGF FV S + + +DG+ LGR LR++F+
Sbjct: 74 VTEVRIMYDKNSGRSRGFGFVHFSNDNEAKCAKDAMDGKVMLGRPLRISFA 124
>gi|399931791|gb|AFP57445.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 144
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LSW +SL AF +G+VV A V+ DG+SGRSRG+GFV +S A+++
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDAGVIVDGDSGRSRGFGFVNFSDDECANEAIKA 98
Query: 128 LNGVELEGRAMRVSLAQGR 146
++G EL+GR +RVS+AQ R
Sbjct: 99 MDGQELQGRNIRVSIAQER 117
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+ D ++GRSRGF FV S E N I+ +DG+E GR +RV+ + + P+
Sbjct: 69 VIVDGDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQERAPR 120
>gi|297791731|ref|XP_002863750.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
gi|297309585|gb|EFH40009.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
Length = 400
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 83/150 (55%), Gaps = 3/150 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG--RILRVNFSDKPKPKL 59
+S + V+ ++ TG + G+ FV + + V++ L+G L + R+N++ +
Sbjct: 117 ISSVKVIRNKHTGLTEGYGFVEFVSHDVAEKVLQELNGEAMLNAEQPFRLNWASFSTGEK 176
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQE-YGNVVGARVLYDGESGRSRGYGFVCYSTK 118
L D +FVG+L+ VT L Q F E Y +V A+V+ DG +GRS+GYGFV +
Sbjct: 177 RLENGPDLSIFVGDLAPEVTDTMLEQIFSEKYPSVKNAKVVIDGNTGRSKGYGFVRFGDD 236
Query: 119 AEMETALESLNGVELEGRAMRVSLAQGRRS 148
+E A+ +NGV+ GRAMR+ A R+
Sbjct: 237 SERSKAMLEMNGVKCCGRAMRIGPATPRKP 266
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
V+ D TGRS+G+ FV + + + ++G + GR +R+ + KP
Sbjct: 216 VVIDGNTGRSKGYGFVRFGDDSERSKAMLEMNGVKCCGRAMRIGPATPRKPS-------- 267
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
L SVT + L Q F YG +V ++ +G GF+ + + E ALE
Sbjct: 268 -GYHQQGLDSSVTDDDLRQPFAGYGEIVSVKIPV------GKGCGFIQFVNRENAEEALE 320
Query: 127 SLNGVELEGRAMRVS 141
LNG + + +R+S
Sbjct: 321 KLNGSMIGKQTVRLS 335
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
++VG+L + L +F G + +V+ + +G + GYGFV + + E L+ L
Sbjct: 93 IWVGDLLHWMDENYLNSSFSSAGEISSVKVIRNKHTGLTEGYGFVEFVSHDVAEKVLQEL 152
Query: 129 NG 130
NG
Sbjct: 153 NG 154
>gi|440297981|gb|ELP90622.1| nucleolysin TIA-1, putative [Entamoeba invadens IP1]
Length = 305
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 78/135 (57%), Gaps = 5/135 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
++ D+ TG + F+ EN++GR G+ L+VN++ + A+
Sbjct: 70 IMKDK-TGTHARYGFIEFIDHTTAEFAKENMNGRLVYGKELKVNWTHDSQSD----AKGS 124
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
FKLFVG L VT E L Q F ++G V ARVL +SG+S+GYGFV + K + ETA++
Sbjct: 125 FKLFVGGLHTEVTNEILYQNFAKFGRVSDARVLRYSQSGKSQGYGFVTFIRKEDAETAMQ 184
Query: 127 SLNGVELEGRAMRVS 141
+NG +++GR ++V+
Sbjct: 185 MMNGEKIQGRTVKVN 199
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF---SDKPKPK 58
+S VL ++G+S+G+ FVT ED ++ ++G + GR ++VN+ + KP
Sbjct: 151 VSDARVLRYSQSGKSQGYGFVTFIRKEDAETAMQMMNGEKIQGRTVKVNWGTATQKPTET 210
Query: 59 LPL--------YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 110
+ + T+ ++VG + ++ + F ++G ++ +++ + + Y
Sbjct: 211 VKRGFDEISRETSNTNNNVYVGGIPKETEESTMRKLFGDFGEIIDLKIM---RTDAEKAY 267
Query: 111 GFVCYSTKAEMETALESLNGVELEG 135
GFV + + A+ LNG +L G
Sbjct: 268 GFVRFVSHDNATKAIMMLNGYQLNG 292
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
E + V L SV L++ F G+VV +++ D ++G YGF+ + E
Sbjct: 36 ENSKSVHVAGLHESVDETLLSRIFSIVGHVVSCKIMKD-KTGTHARYGFIEFIDHTTAEF 94
Query: 124 ALESLNGVELEGRAMRVSLAQGRRS 148
A E++NG + G+ ++V+ +S
Sbjct: 95 AKENMNGRLVYGKELKVNWTHDSQS 119
>gi|2366750|dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris]
gi|295393569|gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931789|gb|AFP57444.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931793|gb|AFP57446.1| RNA-binding glycine-rich protein [Nicotiana acuminata]
gi|399931795|gb|AFP57447.1| RNA-binding glycine-rich protein [Nicotiana alata]
gi|399931809|gb|AFP57454.1| RNA-binding glycine-rich protein [Nicotiana sylvestris]
Length = 144
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LSW +SL AF +G+VV ARV+ D +SGRSRG+GFV +S A+++
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKA 98
Query: 128 LNGVELEGRAMRVSLAQGR 146
++G EL+GR +RVS+AQ R
Sbjct: 99 MDGQELQGRNIRVSIAQER 117
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+ DR++GRSRGF FV S E N I+ +DG+E GR +RV+ + + P+
Sbjct: 69 VIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQERAPR 120
>gi|389741761|gb|EIM82949.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 145
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 58/79 (73%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSW+ T ++L QAF E+G ++ + V+ D E+GRSRG+GFV + T E + A+ +
Sbjct: 4 KVYVGNLSWNTTDDTLRQAFSEFGAILDSIVMRDRETGRSRGFGFVTFGTPEEADAAINN 63
Query: 128 LNGVELEGRAMRVSLAQGR 146
LN EL+GR +RV+LA +
Sbjct: 64 LNEQELDGRRIRVNLANAK 82
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V+ DRETGRSRGF FVT T E+ +A I NL+ +E GR +RVN ++
Sbjct: 34 VMRDRETGRSRGFGFVTFGTPEEADAAINNLNEQELDGRRIRVNLAN 80
>gi|384483165|gb|EIE75345.1| hypothetical protein RO3G_00049 [Rhizopus delemar RA 99-880]
Length = 366
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 84/148 (56%), Gaps = 7/148 (4%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK-PKPKLP 60
+ + + D TG++RGF + +T E +A + L G E+LGR +R++ +D K
Sbjct: 165 IKDVRIRIDEATGKNRGFCHIDFATQEAKDAAVA-LSGNEFLGRRIRIDGADGGKKTNTS 223
Query: 61 LYAETDFKLFVGNLSWSVTTES----LTQAFQEYGNVVGA-RVLYDGESGRSRGYGFVCY 115
A K+FV NL+ ++ LT+AFQE+G +VG R+ Y+ ESG +G G++ +
Sbjct: 224 GPASATKKVFVANLNRDYDEDAHRTALTEAFQEFGTIVGDIRLPYNRESGALKGIGYIEF 283
Query: 116 STKAEMETALESLNGVELEGRAMRVSLA 143
T + E A++ +NGVE+ GR +R +
Sbjct: 284 ETTEQAEAAVKGMNGVEINGRPLRTDFS 311
>gi|407038416|gb|EKE39116.1| RNA-binding protein TIA-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 77/130 (59%), Gaps = 4/130 (3%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
++G G+ FV +N+DGR GR L+VN+S + + + ++K+FV
Sbjct: 78 KSGVHAGYGFVEFVDSTTARFAKDNMDGRVVYGRELKVNWSYTAQQE----NQGNYKIFV 133
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G L V + L + FQ++G V ARVL ++G+S+GYGFV + K + ETA++ +NG
Sbjct: 134 GGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGE 193
Query: 132 ELEGRAMRVS 141
+LEGR ++V+
Sbjct: 194 KLEGRNIKVN 203
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 20/154 (12%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF------SDKPKPKLP 60
VL +TG+S+G+ FVT ED ++ ++G + GR ++VN+ S +PK
Sbjct: 160 VLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQPKRS 219
Query: 61 ---LYAET---DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
+ ET + +++GN+ +V ++ L Q EYG++ R+ + +GY F+
Sbjct: 220 YDEINNETSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRL------NKDKGYAFIK 273
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+S +A+ NG + G +R S GR S
Sbjct: 274 FSKHESATSAILMCNGKIINGSTLRCSW--GRES 305
>gi|67465872|ref|XP_649094.1| RNA-binding protein TIA-1 [Entamoeba histolytica HM-1:IMSS]
gi|56465456|gb|EAL43711.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705857|gb|EMD45818.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica KU27]
Length = 306
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 77/130 (59%), Gaps = 4/130 (3%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
++G G+ FV +N+DGR GR L+VN+S + + + ++K+FV
Sbjct: 78 KSGVHAGYGFVEFVDSTTARFAKDNMDGRVVYGRELKVNWSYTAQQE----NQGNYKIFV 133
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G L V + L + FQ++G V ARVL ++G+S+GYGFV + K + ETA++ +NG
Sbjct: 134 GGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGE 193
Query: 132 ELEGRAMRVS 141
+LEGR ++V+
Sbjct: 194 KLEGRNIKVN 203
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 20/154 (12%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF------SDKPKPKLP 60
VL +TG+S+G+ FVT ED ++ ++G + GR ++VN+ S +PK
Sbjct: 160 VLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQPKRS 219
Query: 61 ---LYAET---DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
+ ET + +++GN+ +V ++ L Q EYG++ R+ + +GY F+
Sbjct: 220 YDEINNETSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRL------NKDKGYAFIK 273
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+S +A+ NG + G +R S GR S
Sbjct: 274 FSKHESATSAILMCNGKIINGSTLRCSW--GRES 305
>gi|85111281|ref|XP_963862.1| hypothetical protein NCU03092 [Neurospora crassa OR74A]
gi|28925605|gb|EAA34626.1| predicted protein [Neurospora crassa OR74A]
Length = 428
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 15/154 (9%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-----DKPKPKLP- 60
V+ DRE+GRSRGF +V +T E + G GR +R++F+ +KP+ K
Sbjct: 211 VVTDRESGRSRGFGYVDFATNEQAQKAYDAKSGALLEGREMRLDFAAKDAGNKPQDKAAN 270
Query: 61 --------LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
+ E+D LFVGN+ +S ++ F +V R+ D ESGR +G+ +
Sbjct: 271 RAAKHGDTISPESDT-LFVGNMPFSADESVVSDFFNSVASVASLRIPTDQESGRPKGFAY 329
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
V +++ + + A E LNG +L GR +R+ A+ R
Sbjct: 330 VTFNSVEDAKNAFEQLNGSDLNGRPVRLDYAKPR 363
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNL W + L F++ ARV+ D ESGRSRG+G+V ++T + + A ++
Sbjct: 182 LWVGNLGWGIDDAILLAEFEDCEGAKSARVVTDRESGRSRGFGYVDFATNEQAQKAYDAK 241
Query: 129 NGVELEGRAMRVSLA 143
+G LEGR MR+ A
Sbjct: 242 SGALLEGREMRLDFA 256
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK 56
++ L + D+E+GR +GFA+VT ++VED E L+G + GR +R++++ KP+
Sbjct: 310 VASLRIPTDQESGRPKGFAYVTFNSVEDAKNAFEQLNGSDLNGRPVRLDYA-KPR 363
>gi|544426|sp|Q03878.1|GRP1_DAUCA RecName: Full=Glycine-rich RNA-binding protein
gi|18347|emb|CAA41152.1| glycine-rich protein [Daucus carota]
gi|445138|prf||1908438A Gly-rich protein
Length = 157
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 58/82 (70%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AE +++ FVG L+W+ ESL QAF ++G++ ++++ D E+GRSRG+GFV + + M
Sbjct: 2 AEVEYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMR 61
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG EL+GR + V+ AQ
Sbjct: 62 DAIEGMNGQELDGRNITVNEAQ 83
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ ++ DRETGRSRGF FVT + IE ++G+E GR + VN
Sbjct: 32 ITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVN 80
>gi|408398205|gb|EKJ77338.1| hypothetical protein FPSE_02416 [Fusarium pseudograminearum CS3096]
Length = 128
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 58/79 (73%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGNLSW+ T ++L Q F E+G V + ++ D E+GR+RG+GFV +ST+ + A+++
Sbjct: 3 KLYVGNLSWNTTDDTLRQTFSEFGEVTDSIIMRDRETGRARGFGFVTFSTEEQANAAVDA 62
Query: 128 LNGVELEGRAMRVSLAQGR 146
LN EL+GR +RV++A R
Sbjct: 63 LNEQELDGRRIRVNVANAR 81
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
++ DRETGR+RGF FVT ST E NA ++ L+ +E GR +RVN ++
Sbjct: 33 IMRDRETGRARGFGFVTFSTEEQANAAVDALNEQELDGRRIRVNVAN 79
>gi|320585953|gb|EFW98632.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Grosmannia clavigera kw1407]
Length = 488
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 47/135 (34%), Positives = 73/135 (54%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+ + + FV ++NL+GR +RVN++ + F +FV
Sbjct: 122 KNAKGYNYGFVEYDDPGAAERAMQNLNGRRVHQSEIRVNWAYQSNTTSKEDTSGHFHIFV 181
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS V E LTQAF +G+V ARV++D ++GRSRGYGFV + + + E AL S++G
Sbjct: 182 GDLSNEVNDEVLTQAFTSFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGE 241
Query: 132 ELEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 242 WLGSRAIRCNWANQK 256
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 203 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSM 261
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P +++ +VGNL+ T L
Sbjct: 262 AQQQALQQVGMTPTTPFGHHHFPTQGINSYEMVINQTPAWQTTCYVGNLTPYTTQNDLVP 321
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ + A+ LNG + GR ++ S +
Sbjct: 322 LFQNFGYVVESRFQSD------RGFAFIKLDSHENAAMAICQLNGYNVNGRPLKCSWGKD 375
Query: 146 R 146
+
Sbjct: 376 K 376
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+++L
Sbjct: 89 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGYNYGFVEYDDPGAAERAMQNL 147
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 148 NGRRVHQSEIRVNWA 162
>gi|350296577|gb|EGZ77554.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 356
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 15/154 (9%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-----DKPKPKLP- 60
V+ DRE+GRSRGF +V +T E + G GR +R++F+ +KP+ K
Sbjct: 139 VVTDRESGRSRGFGYVDFATNEQAQKAYDAKSGALLEGREMRLDFAAKDAGNKPQDKAAN 198
Query: 61 --------LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
+ E+D LFVGN+ +S ++ F +V R+ D ESGR +G+ +
Sbjct: 199 RAAKHGDTISPESD-TLFVGNMPFSADESVVSDFFNSVASVASLRIPTDQESGRPKGFAY 257
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
V +++ + + A E LNG +L GR +R+ A+ R
Sbjct: 258 VTFNSVEDAKNAFEQLNGSDLNGRPVRLDYAKPR 291
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%)
Query: 56 KPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
K K A+ L+VGNL W + L F++ ARV+ D ESGRSRG+G+V +
Sbjct: 97 KAKTEEVADDKSTLWVGNLGWGIDDAILLAEFEDCEGAKSARVVTDRESGRSRGFGYVDF 156
Query: 116 STKAEMETALESLNGVELEGRAMRVSLA 143
+T + + A ++ +G LEGR MR+ A
Sbjct: 157 ATNEQAQKAYDAKSGALLEGREMRLDFA 184
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK 56
++ L + D+E+GR +GFA+VT ++VED E L+G + GR +R++++ KP+
Sbjct: 238 VASLRIPTDQESGRPKGFAYVTFNSVEDAKNAFEQLNGSDLNGRPVRLDYA-KPR 291
>gi|336464486|gb|EGO52726.1| hypothetical protein NEUTE1DRAFT_91358 [Neurospora tetrasperma FGSC
2508]
Length = 356
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 15/154 (9%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-----DKPKPKLP- 60
V+ DRE+GRSRGF +V +T E + G GR +R++F+ +KP+ K
Sbjct: 139 VVTDRESGRSRGFGYVDFATNEQAQKAYDAKSGALLEGREMRLDFAAKDAGNKPQDKAAN 198
Query: 61 --------LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
+ E+D LFVGN+ +S ++ F +V R+ D ESGR +G+ +
Sbjct: 199 RAAKHGDTISPESD-TLFVGNMPFSADESVVSDFFNSVASVASLRIPTDQESGRPKGFAY 257
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
V +++ + + A E LNG +L GR +R+ A+ R
Sbjct: 258 VTFNSVEDAKNAFEQLNGSDLNGRPVRLDYAKPR 291
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%)
Query: 56 KPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
K K A+ L+VGNL W + L F++ ARV+ D ESGRSRG+G+V +
Sbjct: 97 KAKTEEVADDKSTLWVGNLGWGIDDAILLAEFEDCEGAKSARVVTDRESGRSRGFGYVDF 156
Query: 116 STKAEMETALESLNGVELEGRAMRVSLA 143
+T + + A ++ +G LEGR MR+ A
Sbjct: 157 ATNEQAQKAYDAKSGALLEGREMRLDFA 184
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK 56
++ L + D+E+GR +GFA+VT ++VED E L+G + GR +R++++ KP+
Sbjct: 238 VASLRIPTDQESGRPKGFAYVTFNSVEDAKNAFEQLNGSDLNGRPVRLDYA-KPR 291
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 15/152 (9%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP------ 60
V DR+TG+S+GF +V + +E ++GRE GR + ++ + P P
Sbjct: 303 VQMDRQTGKSKGFGYVEFADAASAKKAVETMNGREIDGRPVNLDLATPRGPPNPERRAKA 362
Query: 61 ---LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
+E LFVGNL++S T +++ + F G VV R+ D +SG+ +G+G+V +
Sbjct: 363 FGDSRSEPSATLFVGNLAFSATQDAVYELFGAVGEVVNVRLPTDRDSGQPKGFGYVEF-- 420
Query: 118 KAEMETALESLN---GVELEGRAMRVSLAQGR 146
A++ETA ++LN G + EGR +R+ + R
Sbjct: 421 -ADVETASKALNELGGTDFEGRNIRLDFSAPR 451
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG LSW+V E L F E G VV ARV D ++G+S+G+G+V ++ A + A+E++
Sbjct: 274 IFVGRLSWNVDDEWLKTEFAEAGEVVSARVQMDRQTGKSKGFGYVEFADAASAKKAVETM 333
Query: 129 NGVELEGRAMRVSLAQGR 146
NG E++GR + + LA R
Sbjct: 334 NGREIDGRPVNLDLATPR 351
>gi|357152879|ref|XP_003576265.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 165
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 59/82 (71%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+++ FVG L+W+ +L AF +G ++ A+++ D E+GRSRG+GFV ++T+ M+ A+
Sbjct: 3 EYRCFVGGLAWATDDHNLQSAFSNFGEILDAKIIQDRETGRSRGFGFVTFATEESMQAAI 62
Query: 126 ESLNGVELEGRAMRVSLAQGRR 147
E +NG EL+GR++ V+ AQ RR
Sbjct: 63 EGMNGKELDGRSITVNQAQSRR 84
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT +T E A IE ++G+E GR + VN
Sbjct: 35 IIQDRETGRSRGFGFVTFATEESMQAAIEGMNGKELDGRSITVN 78
>gi|331228813|ref|XP_003327073.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306063|gb|EFP82654.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 637
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
V+ DR+T +S+GF ++ T E IE +G E GR L+V+ S + P + D
Sbjct: 389 VITDRDTQKSKGFGYIDFETCEGAQKAIETKNGTELDGRTLKVDLSAPRAERAPAENKRD 448
Query: 67 FK----------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
F LFVGNL +S T +S+ + F EYG+V R+ D E+ R +G+G+V ++
Sbjct: 449 FSKEELSAESTTLFVGNLPFSATQDSVWEIFAEYGDVNSVRLPTDPETQRVKGFGYVEFA 508
Query: 117 TKAEMETALES--LNGVELEGRAMRVSLAQGR 146
T A+E GV ++ R R+ +Q R
Sbjct: 509 TLESARAAVEKGRGEGVYIDNRQARLDFSQPR 540
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/100 (38%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 48 RVNFSDKPKPKLPLYAETDFK-LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR 106
R N P PK AE K ++VG LSW+V +E L F+ G +V ARV+ D ++ +
Sbjct: 338 RKNEGPNPSPKKAKAAEEGIKNVYVGGLSWNVDSEWLKSEFESCGPIVDARVITDRDTQK 397
Query: 107 SRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
S+G+G++ + T + A+E+ NG EL+GR ++V L+ R
Sbjct: 398 SKGFGYIDFETCEGAQKAIETKNGTELDGRTLKVDLSAPR 437
>gi|115474525|ref|NP_001060859.1| Os08g0117100 [Oryza sativa Japonica Group]
gi|50725630|dbj|BAD33097.1| putative RNA-binding protein RNP-D precursor [Oryza sativa Japonica
Group]
gi|113622828|dbj|BAF22773.1| Os08g0117100 [Oryza sativa Japonica Group]
gi|125559951|gb|EAZ05399.1| hypothetical protein OsI_27607 [Oryza sativa Indica Group]
gi|215704603|dbj|BAG94231.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 319
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 15/151 (9%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRIL-------------RVNFSDKPK 56
D ETG SRG FVTM ++ + + LDG + GR + +N + P
Sbjct: 168 DPETGLSRGCGFVTMRSLPEARTAMNALDGFDLDGREMLVKLSSDVVSKRRNINMTHTPP 227
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
K ++ E+ K++VGN++WSV + L + F + G VV R+L D + GR R YGF+ ++
Sbjct: 228 VKDHIF-ESPHKIYVGNIAWSVEPQELREYFSQCGTVVSTRLLTDRKGGRGRVYGFLSFA 286
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGRR 147
+ E+E AL+ L+ GR + V A R
Sbjct: 287 SAEELEAALK-LDNTHFHGRNILVRQAHEER 316
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+LFV NL + L + F+ YG V+ + D E+G SRG GFV + E TA+ +
Sbjct: 135 ELFVCNLPRRCDVDDLYELFKPYGTVLSVEISRDPETGLSRGCGFVTMRSLPEARTAMNA 194
Query: 128 LNGVELEGRAMRVSLA 143
L+G +L+GR M V L+
Sbjct: 195 LDGFDLDGREMLVKLS 210
>gi|384499302|gb|EIE89793.1| hypothetical protein RO3G_14504 [Rhizopus delemar RA 99-880]
Length = 292
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 79/135 (58%), Gaps = 10/135 (7%)
Query: 15 RSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDF-----KL 69
+SRGFA + ++ E A + LDG E++GR +RV D +P +T++ K+
Sbjct: 120 KSRGFAHIDFTSAEGKQAAMA-LDGTEFMGRTIRV---DDAQPAQGRSTDTNYGPKTDKV 175
Query: 70 FVGNLSWSVTTESLTQAFQEYGNVVGARVL-YDGESGRSRGYGFVCYSTKAEMETALESL 128
FV NLS+ +SL QAF+++G +VG L ++GR RG ++ + T+ E E A++ +
Sbjct: 176 FVANLSYDTDEDSLKQAFEKFGTIVGEIGLPISRDTGRIRGIAYIQFETEDEAEAAVKGM 235
Query: 129 NGVELEGRAMRVSLA 143
NGV L+GR +R +
Sbjct: 236 NGVYLDGRPIRTDFS 250
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG L++ T E + F + G V R+ +SRG+ + + T AE + A +L
Sbjct: 83 VFVGQLNFDATAEEIRTHFGQCGPVSDVRLRMHPNGVKSRGFAHIDF-TSAEGKQAAMAL 141
Query: 129 NGVELEGRAMRVSLAQ 144
+G E GR +RV AQ
Sbjct: 142 DGTEFMGRTIRVDDAQ 157
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 1 MLSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
++ ++ + R+TGR RG A++ T ++ A ++ ++G GR +R +FS
Sbjct: 199 IVGEIGLPISRDTGRIRGIAYIQFETEDEAEAAVKGMNGVYLDGRPIRTDFS 250
>gi|50409715|ref|XP_456900.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
gi|49652564|emb|CAG84877.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
Length = 447
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 13/152 (8%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPKPKLP----- 60
V+ +R TG+SRG+ +V + ++ G+E GR + ++ S KP P
Sbjct: 229 VIMERSTGKSRGYGYVDFDSKSAAEKALQEYQGKELDGRPINLDMSTGKPHASNPNTDRA 288
Query: 61 ------LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
A +D LFVGNLS++ +SL F EYG VV R+ ++ + +G+G+V
Sbjct: 289 KQFGDVPSAPSD-TLFVGNLSFNAERDSLFNTFGEYGTVVSCRIPTHPDTQQPKGFGYVQ 347
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+S+ E + ALE+LNG L+GRA R+ + R
Sbjct: 348 FSSVDEAKAALEALNGEYLDGRACRLDFSTPR 379
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%)
Query: 58 KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
K P E LFVG LSWS+ E L + F+ G V+ ARV+ + +G+SRGYG+V + +
Sbjct: 189 KKPKTNEEPATLFVGRLSWSIDDEWLRREFEPVGGVISARVIMERSTGKSRGYGYVDFDS 248
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQGR 146
K+ E AL+ G EL+GR + + ++ G+
Sbjct: 249 KSAAEKALQEYQGKELDGRPINLDMSTGK 277
>gi|255645618|gb|ACU23303.1| unknown [Glycine max]
Length = 315
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 75/139 (53%), Gaps = 7/139 (5%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL---PLYAET-DFKL 69
R+RG AFV M + E+ + NL+ E+ GR+++VN++ K K P+ + F L
Sbjct: 125 NRNRGLAFVEMGSPEEALEALNNLESYEFEGRVIKVNYARPKKEKTAPPPVKPKVVTFNL 184
Query: 70 FVGNLSWSVTTESLTQAFQ-EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
FV NLS+ +++ L + F G VV A V+Y R GYGFV + +K E E AL
Sbjct: 185 FVANLSYEASSKDLKEFFDLGTGRVVSAEVVYRDNPRRPSGYGFVSFKSKKEAEAALAEF 244
Query: 129 NGVELEGRAMRVSLAQGRR 147
G GR +RV +GRR
Sbjct: 245 QGKVFMGRPIRVD--RGRR 261
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 60 PLYAETDF---KLFVGNLSWSVTTESLTQAFQEYGNVVGARV-LYDGESGRSRGYGFVCY 115
PL +E +F +L N+ W+ T E + F+++G V+ + +Y + R+RG FV
Sbjct: 78 PLVSEEEFSRTRLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMY--KKNRNRGLAFVEM 135
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQGRR 147
+ E AL +L E EGR ++V+ A+ ++
Sbjct: 136 GSPEEALEALNNLESYEFEGRVIKVNYARPKK 167
>gi|52076130|dbj|BAD46643.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|52076137|dbj|BAD46650.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|222642112|gb|EEE70244.1| hypothetical protein OsJ_30366 [Oryza sativa Japonica Group]
Length = 611
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 17/143 (11%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLG--RILRVNFSDK-PKPKLPL-------------- 61
F VTM+TV+ ++ D R +L +L V F+++ P+ + L
Sbjct: 462 FGVVTMTTVQKPADIVAAFDKRGFLDLHPLLAVEFAEQQPRQEWILTEAALAIAPTTVHS 521
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
++ DF ++VGNL W V L + F E+G V+ A+V+ D ++GRSRG+GFV +T E
Sbjct: 522 FSPKDFSIYVGNLRWDVDRLRLLKFFGEHGRVLVAQVVCDRQTGRSRGFGFVSMATLREP 581
Query: 122 ETALESLNGVELEGRAMRVSLAQ 144
+ + SLNG ++GR MRVS A+
Sbjct: 582 DDVIASLNGQIMDGRPMRVSFAK 604
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL 59
V+ DR+TGRSRGF FV+M+T+ + + VI +L+G+ GR +RV+F+ K +P+L
Sbjct: 558 VVCDRQTGRSRGFGFVSMATLREPDDVIASLNGQIMDGRPMRVSFA-KWQPRL 609
>gi|388855334|emb|CCF50998.1| related to NSR1-nuclear localization sequence binding protein
[Ustilago hordei]
Length = 452
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 8/148 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS--------DKPKPK 58
V DR TG+SRGF +V +T E G++ GR +R++ S D+ K
Sbjct: 210 VQLDRTTGKSRGFGYVDFATAAAAKKAFEEGQGKQVDGRAIRIDLSTPKGDVSEDRAKKF 269
Query: 59 LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
+ LF+GNLS+ +T + + AF E+G V G R+ D +SGR +G+G+V ++ +
Sbjct: 270 NDQRSAPSSTLFIGNLSFDITEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQ 329
Query: 119 AEMETALESLNGVELEGRAMRVSLAQGR 146
A++++ G EL GR +R+ + R
Sbjct: 330 ESAAAAIDAMTGQELAGRPLRLDFSTPR 357
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 6/98 (6%)
Query: 52 SDKPKPKLPLYAETDF------KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG 105
S K K + P A T+ +++VG LSW+V + L + +G V ARV D +G
Sbjct: 158 SKKAKTEEPAAATTELAEGETNQVWVGQLSWNVDNDWLKSEMEVFGQVTSARVQLDRTTG 217
Query: 106 RSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
+SRG+G+V ++T A + A E G +++GRA+R+ L+
Sbjct: 218 KSRGFGYVDFATAAAAKKAFEEGQGKQVDGRAIRIDLS 255
>gi|398409740|ref|XP_003856335.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
gi|339476220|gb|EGP91311.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
Length = 505
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 49/160 (30%), Positives = 86/160 (53%), Gaps = 15/160 (9%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS--------- 52
L+ + ++ DR++GRS+GF +V S ++ +E +G E GR LR++FS
Sbjct: 268 LAGVRIITDRDSGRSKGFGYVEFSDPQNAKKALEAKNGAELDGRELRLDFSTPRTNDGPG 327
Query: 53 --DKPKPKLPLYAETD----FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR 106
+K + + +T LFVGN+S+ ++T+ FQE+G + R+ D E+G
Sbjct: 328 AGNKSNDRAARFGDTTNAPAATLFVGNISFDADENAITEYFQEHGTIKAVRLPTDRETGA 387
Query: 107 SRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+G+G+V S+ E + A +L G ++ GR +R+ A R
Sbjct: 388 PKGFGYVEMSSIEEAQAAFTALQGADIAGRPIRLDYAAER 427
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 55/78 (70%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGN+SW+V E LT+ F+E+G + G R++ D +SGRS+G+G+V +S + ALE+
Sbjct: 244 LFVGNISWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGFGYVEFSDPQNAKKALEAK 303
Query: 129 NGVELEGRAMRVSLAQGR 146
NG EL+GR +R+ + R
Sbjct: 304 NGAELDGRELRLDFSTPR 321
>gi|356515764|ref|XP_003526568.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Glycine
max]
Length = 315
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 75/139 (53%), Gaps = 7/139 (5%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL---PLYAET-DFKL 69
R+RG AFV M + E+ + NL+ E+ GR+++VN++ K K P+ + F L
Sbjct: 125 NRNRGLAFVEMGSPEEALEALNNLESYEFEGRVIKVNYARPKKEKTAPPPVKPKVVTFNL 184
Query: 70 FVGNLSWSVTTESLTQAFQ-EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
FV NLS+ +++ L + F G VV A V+Y R GYGFV + +K E E AL
Sbjct: 185 FVANLSYEASSKDLKEFFDLGTGRVVSAEVVYRDNPRRPSGYGFVSFKSKKEAEAALAEF 244
Query: 129 NGVELEGRAMRVSLAQGRR 147
G GR +RV +GRR
Sbjct: 245 QGKVFMGRPIRVD--RGRR 261
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 60 PLYAETDF---KLFVGNLSWSVTTESLTQAFQEYGNVVGARV-LYDGESGRSRGYGFVCY 115
PL +E +F +L N+ W+ T E + F+++G V+ + +Y + R+RG FV
Sbjct: 78 PLVSEEEFSRTRLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMY--KKNRNRGLAFVEM 135
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQGRR 147
+ E AL +L E EGR ++V+ A+ ++
Sbjct: 136 GSPEEALEALNNLESYEFEGRVIKVNYARPKK 167
>gi|167391953|ref|XP_001739964.1| nucleolysin TIAR [Entamoeba dispar SAW760]
gi|165896141|gb|EDR23641.1| nucleolysin TIAR, putative [Entamoeba dispar SAW760]
Length = 306
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 76/130 (58%), Gaps = 4/130 (3%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
++G G+ FV +N+DGR GR L+VN+S + + + +K+FV
Sbjct: 78 KSGTHAGYGFVEFVDSTTARFAKDNMDGRVVYGRELKVNWSYTAQQE----NQGSYKIFV 133
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G L V + L + FQ++G V ARVL ++G+S+GYGFV + K + ETA++ +NG
Sbjct: 134 GGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGE 193
Query: 132 ELEGRAMRVS 141
+LEGR ++V+
Sbjct: 194 KLEGRNIKVN 203
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 20/154 (12%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF------SDKPKPKLP 60
VL +TG+S+G+ FVT ED ++ ++G + GR ++VN+ S +PK
Sbjct: 160 VLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQPKRS 219
Query: 61 ---LYAETDFK---LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
+ ET + +++GN+ +V ++ L Q EYG++ R+ + +GY F+
Sbjct: 220 YDEINNETSIQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRL------NKDKGYAFIK 273
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+S +A+ NG + G +R S GR S
Sbjct: 274 FSKHESATSAILMCNGKIINGSTLRCSW--GRES 305
>gi|118372171|ref|XP_001019282.1| nucleolar phosphoprotein [Tetrahymena thermophila]
gi|89301049|gb|EAR99037.1| nucleolar phosphoprotein [Tetrahymena thermophila SB210]
Length = 320
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 83/144 (57%), Gaps = 12/144 (8%)
Query: 8 LYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL----PLYA 63
L E G S+G AFV+ T E CN +E L E++GR + F +K KPK+ L A
Sbjct: 174 LLKNEQGCSKGVAFVSFETEEGCNKAVE-LSDSEFMGRQI---FIEKTKPKIERPAQLPA 229
Query: 64 ETDFK-LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
+ D K +FVGNLS+ E+L + F G VV AR+ G+SRG+G V + ++ +E
Sbjct: 230 DQDSKTIFVGNLSFVTNKETLKKFFASCGKVVNARIAE--AEGKSRGFGHVEFEERSGVE 287
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
AL+ + G +++GR +RV +A R
Sbjct: 288 NALK-MAGEQIDGRPIRVDVAASR 310
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV------------ 49
+SK+ +L + + GRS+G AFV+ T E N +E ++ E++GR L +
Sbjct: 59 VSKVKLLMNSQ-GRSKGIAFVSFETEEGYNKALE-MNNSEFMGRYLIIEKTKSKAERLTQ 116
Query: 50 --NFSDKPKPKLPLYAET-------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLY 100
+++D+ PK+ + D ++ V LS+ + E V L
Sbjct: 117 MHSYADQG-PKIVIVDNISSKINKFDNEVIVKGLSFDADENDIGNYLNENCGSVTRVNLL 175
Query: 101 DGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 140
E G S+G FV + T+ A+E L+ E GR + +
Sbjct: 176 KNEQGCSKGVAFVSFETEEGCNKAVE-LSDSEFMGRQIFI 214
>gi|260943806|ref|XP_002616201.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
gi|238849850|gb|EEQ39314.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 79/151 (52%), Gaps = 12/151 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
V+ +R TG+SRG+ +V S+ + L G+E GR + ++ S KPK P +
Sbjct: 212 VMIERSTGKSRGYGYVDFSSKAAAEKALNELQGKEIDGRPVNLDMSTG-KPKTPASNDRA 270
Query: 67 FK-----------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
K LF+GNLS++ L + F EYG VV R+ ++ + +G+G+V +
Sbjct: 271 KKFGDVPSAPSDTLFIGNLSFNTERNKLFEIFGEYGTVVSCRLPTHPDTQQPKGFGYVQF 330
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQGR 146
S+ E + AL SLNG L+GR R+ + R
Sbjct: 331 SSVEEAQNALNSLNGEYLDGRPCRLDFSTPR 361
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 57/87 (65%)
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
P +E LFVG LSW+V E L + F+E G V+ ARV+ + +G+SRGYG+V +S+KA
Sbjct: 174 PEASEEPATLFVGRLSWNVDDEWLKREFEEAGGVISARVMIERSTGKSRGYGYVDFSSKA 233
Query: 120 EMETALESLNGVELEGRAMRVSLAQGR 146
E AL L G E++GR + + ++ G+
Sbjct: 234 AAEKALNELQGKEIDGRPVNLDMSTGK 260
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 16/154 (10%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
++ DRETGR +GF +V +T D + E GR L V+FS P+ K P +T+
Sbjct: 265 IITDRETGRGKGFGYVEFATSADAAKAQAEMHQYELDGRPLNVDFS-TPRQK-PDAGKTN 322
Query: 67 FK--------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
+ LF+GNLS+ T +S+ + F EYGN+ + D ++G +G+G+
Sbjct: 323 DRANKYGDKRSAPSNTLFLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDRDTGSIKGFGY 382
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
V + ++ E AL++LNG ++ GR +R+ A R
Sbjct: 383 VDFGSQEEATAALDALNGQDIAGRNIRIDYAAPR 416
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 55/88 (62%)
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
P AE LFVGNLSW++ + L + F+ +G +VG R++ D E+GR +G+G+V ++T A
Sbjct: 227 PAGAEGIKNLFVGNLSWNIDEDWLRREFEGFGEIVGCRIITDRETGRGKGFGYVEFATSA 286
Query: 120 EMETALESLNGVELEGRAMRVSLAQGRR 147
+ A ++ EL+GR + V + R+
Sbjct: 287 DAAKAQAEMHQYELDGRPLNVDFSTPRQ 314
Score = 38.9 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 35/51 (68%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
++++++ DR+TG +GF +V + E+ A ++ L+G++ GR +R++++
Sbjct: 363 ITRVSLPTDRDTGSIKGFGYVDFGSQEEATAALDALNGQDIAGRNIRIDYA 413
>gi|296421441|ref|XP_002840273.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636488|emb|CAZ84464.1| unnamed protein product [Tuber melanosporum]
Length = 91
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 55/81 (67%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLF+G L+W ++L Q FQE+GNV A V+ D ++GRSRG+GFV YS+ E A+++
Sbjct: 3 KLFIGGLAWHTDDDALRQKFQEFGNVEEAVVVKDRDTGRSRGFGFVRYSSDEEATAAMDN 62
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
+N VE +GR +RV A RR
Sbjct: 63 MNDVEFDGRRIRVDKASDRRQ 83
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
+ + V+ DR+TGRSRGF FV S+ E+ A ++N++ E+ GR +RV+
Sbjct: 28 VEEAVVVKDRDTGRSRGFGFVRYSSDEEATAAMDNMNDVEFDGRRIRVD 76
>gi|67517823|ref|XP_658695.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
gi|40747053|gb|EAA66209.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
Length = 892
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 49/144 (34%), Positives = 78/144 (54%), Gaps = 2/144 (1%)
Query: 5 LTVLYDRETGRSRG--FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLY 62
+ ++ D+ S+G + FV ++ L+GR +RVN++ +
Sbjct: 119 VKIIPDKNQFNSKGANYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQSNTANKED 178
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
F +FVG+LS V E L QAF +G+V ARV++D ++GRSRGYGFV + +A+ E
Sbjct: 179 TSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAE 238
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
AL S++G L RA+R + A +
Sbjct: 239 KALTSMDGEWLGSRAIRCNWANQK 262
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 209 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALTSMDG-EWLGSRAIRCNWANQKGQPSI 267
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T +
Sbjct: 268 SQQQAMAAMGMTPTTPFGHHHFPTHGIQSYDMVVQQTPAWQTTCYVGNLTPYTTQNDIVP 327
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G V+ R+ D RG+ F+ T +A+ LNG + GR ++ S +
Sbjct: 328 LFQNFGYVIETRMQAD------RGFAFIKMDTHENAASAICQLNGYNVNGRPLKCSWGKD 381
Query: 146 R 146
R
Sbjct: 382 R 382
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 126
L+VG L VT + L Q F+ G+V+ +++ D S+G YGFV + E A++
Sbjct: 92 LYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNQFNSKGANYGFVEFDDPGAAERAMQ 151
Query: 127 SLNGVELEGRAMRVSLA 143
+LNG + +RV+ A
Sbjct: 152 TLNGRRIHQSEIRVNWA 168
>gi|440802763|gb|ELR23692.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 425
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 87/152 (57%), Gaps = 14/152 (9%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD----------KPK 56
++ DR+TGR +GF ++ S D +AV+ L+G ++ GR L+V+ ++ KP+
Sbjct: 213 LITDRDTGRKKGFGYIETS-ASDVDAVLA-LNGADFEGRELKVDKANERPANADRDTKPR 270
Query: 57 --PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
P+ A TD +F+GNLS++ T +S+ A +++G V R++YD E+ R RG+G+
Sbjct: 271 DAPRQSGEAATDGNVFLGNLSFNSTEDSIWAALEQFGTVKAVRIVYDRETQRPRGFGYCE 330
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ A+ + V+++GR +R+ A R
Sbjct: 331 FEDADTANKAIAASGTVDVDGRQIRIDTATAR 362
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYG--NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
F+GNL WS +++ Q F+ G V R++ D ++GR +G+G++ T A A+
Sbjct: 182 FFIGNLPWSAEEDTVKQFFESQGVSAVYAVRLITDRDTGRKKGFGYI--ETSASDVDAVL 239
Query: 127 SLNGVELEGRAMRVSLAQGR 146
+LNG + EGR ++V A R
Sbjct: 240 ALNGADFEGRELKVDKANER 259
>gi|367051094|ref|XP_003655926.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
gi|347003190|gb|AEO69590.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
Length = 500
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 47/135 (34%), Positives = 72/135 (53%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+ R + FV ++ L+GR +RVN++ + F +FV
Sbjct: 125 KNARGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNANKEDTSNHFHIFV 184
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS V E L QAF +G+V ARV++D ++GRSRGYGFV + +A+ E AL S++G
Sbjct: 185 GDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGE 244
Query: 132 ELEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 245 WLGSRAIRCNWANQK 259
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 206 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 264
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T +
Sbjct: 265 AQQQAMQQMGLTPTTPYGHHHFPTHGIHSYDMIVNQTPAWQTTCYVGNLTPYTTQNDIVP 324
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ FV T A+ LNG + GR ++ S +
Sbjct: 325 LFQNFGFVVESRFQAD------RGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 378
Query: 146 R 146
+
Sbjct: 379 K 379
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+V +++ D ++ R YGFV Y E A+++L
Sbjct: 92 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPD-KNARGYNYGFVEYDDPGAAERAMQTL 150
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 151 NGRRVHQSEIRVNWA 165
>gi|297687493|ref|XP_002821247.1| PREDICTED: nucleolysin TIAR isoform 2 [Pongo abelii]
gi|410976207|ref|XP_003994514.1| PREDICTED: nucleolysin TIAR isoform 2 [Felis catus]
Length = 393
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + + F +FVG+LS +
Sbjct: 67 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKILPVNHFHVFVGDLSPEI 126
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 127 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 186
Query: 139 RVSLA 143
R + A
Sbjct: 187 RTNWA 191
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 141 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 200
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 201 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 257
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 258 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 289
>gi|412986331|emb|CCO14757.1| predicted protein [Bathycoccus prasinos]
Length = 290
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 78/137 (56%), Gaps = 9/137 (6%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP------KPKLPLYAE--T 65
GRS+G+A + ++ E +A ++ L E R + V +++P KP + E +
Sbjct: 151 GRSKGWALIDFASKEAADAGVKALHDTECRARSIIVR-AERPGGAAATKPPREIRPENSS 209
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
++ V NL WS T++ L Q FQ+ G VV A+ ++GRS+G+G V + T+ + + A+
Sbjct: 210 GLQIVVRNLPWSTTSDDLRQVFQQVGTVVDAKSTCHDDTGRSKGWGTVLFETQEQAQAAI 269
Query: 126 ESLNGVELEGRAMRVSL 142
NGVELEGR M++ +
Sbjct: 270 AGFNGVELEGRPMQIKI 286
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 19/144 (13%)
Query: 15 RSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP-------------- 60
RSRG+A V+ S + ++ ++G R + V +D P PK P
Sbjct: 44 RSRGYALVSFSDESAAQSAMQAMNGHALGDRNISVR-ADNPLPKAPKSSSRGSGGAPVQR 102
Query: 61 ----LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
AE + +VGNL+W ++L + Q G+ V + GRS+G+ + ++
Sbjct: 103 PTNLPEAEEGCRCYVGNLAWETDEQALIEHCQTIGHPVLRCEVARQSGGRSKGWALIDFA 162
Query: 117 TKAEMETALESLNGVELEGRAMRV 140
+K + +++L+ E R++ V
Sbjct: 163 SKEAADAGVKALHDTECRARSIIV 186
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+VGN+ WS T E L F + N+ + G RSRGY V +S ++ ++A+++
Sbjct: 10 RLYVGNIPWSTTVEELQGLFTDAENIE----IPTGRQNRSRGYALVSFSDESAAQSAMQA 65
Query: 128 LNGVELEGRAMRV 140
+NG L R + V
Sbjct: 66 MNGHALGDRNISV 78
>gi|297687491|ref|XP_002821246.1| PREDICTED: nucleolysin TIAR isoform 1 [Pongo abelii]
gi|410976205|ref|XP_003994513.1| PREDICTED: nucleolysin TIAR isoform 1 [Felis catus]
Length = 376
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + + F +FVG+LS +
Sbjct: 50 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKILPVNHFHVFVGDLSPEI 109
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 110 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 169
Query: 139 RVSLA 143
R + A
Sbjct: 170 RTNWA 174
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 124 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 183
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 184 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 240
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 241 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 272
>gi|297687495|ref|XP_002821248.1| PREDICTED: nucleolysin TIAR isoform 3 [Pongo abelii]
Length = 386
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + + F +FVG+LS +
Sbjct: 50 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKILPVNHFHVFVGDLSPEI 109
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 110 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 169
Query: 139 RVSLA 143
R + A
Sbjct: 170 RTNWA 174
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 124 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 183
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 184 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 240
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 241 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 272
>gi|115454539|ref|NP_001050870.1| Os03g0670700 [Oryza sativa Japonica Group]
gi|108710321|gb|ABF98116.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|113549341|dbj|BAF12784.1| Os03g0670700 [Oryza sativa Japonica Group]
Length = 196
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 59/86 (68%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
+ +++ FVG L+W+ SL AF YG ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 4 PDVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMR 63
Query: 123 TALESLNGVELEGRAMRVSLAQGRRS 148
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 64 DAIEGMNGKELDGRNITVNEAQSRRS 89
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT S+ + IE ++G+E GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVN 82
>gi|17531965|ref|NP_495121.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
gi|373219010|emb|CCD65015.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
Length = 408
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 82/143 (57%), Gaps = 4/143 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP-KPKLP 60
++K V++D G + +AFV S + ++ ++ R L R ++VN++ +P + +
Sbjct: 72 VTKTKVIFD---GSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKVNWAVEPGQQQSK 128
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ F +FVG+LS V + L +AFQ +G+V A+V+ D + +S+GYGFV Y + E
Sbjct: 129 IDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREE 188
Query: 121 METALESLNGVELEGRAMRVSLA 143
E A+E +NG L R +R + A
Sbjct: 189 AERAIEQMNGQWLGRRTIRTNWA 211
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 24/159 (15%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFS-----DKP 55
+S V+ D T +S+G+ FV+ E+ IE ++G ++LG R +R N++ D+
Sbjct: 161 VSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG-QWLGRRTIRTNWATRKPGDQE 219
Query: 56 KPKL-------PLYAET---DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG 105
KP +Y +T + ++VGN++ S+T + + Q F +G + R+
Sbjct: 220 KPSHYNEKSYDEIYNQTSGDNTSVYVGNIA-SLTEDEIRQGFASFGRITEVRIF------ 272
Query: 106 RSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+ +GY FV + K A+ +N ++ G+ +R S +
Sbjct: 273 KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 311
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNL +VT + + F + G+V +V++DG + Y FV +S + AL+++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDP---YAFVEFSDHGQASQALQTM 104
Query: 129 NGVELEGRAMRVSLA 143
N L R M+V+ A
Sbjct: 105 NKRLLLDREMKVNWA 119
>gi|224077836|ref|XP_002305429.1| predicted protein [Populus trichocarpa]
gi|118481826|gb|ABK92850.1| unknown [Populus trichocarpa]
gi|222848393|gb|EEE85940.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 61/84 (72%)
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ AE +++ FVG L+W+ T +SL +AF +YG ++ ++++ D E+GRSRG+GFV ++ +
Sbjct: 1 MAAEVEYRCFVGGLAWATTDQSLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFNNEKA 60
Query: 121 METALESLNGVELEGRAMRVSLAQ 144
M A++ +NG +L+GR + V+ AQ
Sbjct: 61 MRDAIDGMNGQDLDGRNITVNEAQ 84
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + + I+ ++G++ GR + VN
Sbjct: 38 IINDRETGRSRGFGFVTFNNEKAMRDAIDGMNGQDLDGRNITVN 81
>gi|449436976|ref|XP_004136268.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449497014|ref|XP_004160289.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 300
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 4/131 (3%)
Query: 15 RSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD---KPKPKLPLYAETDFKLFV 71
R+RG AFVTM + E+ A + NL+ E+ GR LR+N++ + F LFV
Sbjct: 137 RNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFV 196
Query: 72 GNLSWSVTTESLTQAFQE-YGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 130
NL + + L + F GNVV A+++++ RS GYGFV + TK + E A+ G
Sbjct: 197 ANLPFDARAKDLKEFFDSGSGNVVSAQIIFNENPRRSSGYGFVAFKTKKDAEAAISEFQG 256
Query: 131 VELEGRAMRVS 141
GR++RV+
Sbjct: 257 KTFMGRSLRVA 267
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARV-LYDGESGRSRGYGFVCYSTKAEMETALE 126
+L N+ W T E + F++YG V+ + +Y+ R+RG FV + E AL
Sbjct: 100 RLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYN--KIRNRGLAFVTMGSPEEALAALN 157
Query: 127 SLNGVELEGRAMRVSLAQ 144
+L E EGR +R++ A+
Sbjct: 158 NLESYEFEGRTLRLNYAK 175
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
++++ RS G+ FV T +D A I G+ ++GR LRV
Sbjct: 224 IIFNENPRRSSGYGFVAFKTKKDAEAAISEFQGKTFMGRSLRV 266
>gi|357473251|ref|XP_003606910.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507965|gb|AES89107.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 161
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 60/82 (73%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ FVG L+W+ E+L +AF +YG +V ++++ D E+GRSRG+GFV ++ + M
Sbjct: 2 ADVEYRCFVGGLAWATDNEALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMN 61
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E++NG +L+GR + V+ AQ
Sbjct: 62 DAIEAMNGQDLDGRNITVNQAQ 83
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + + N IE ++G++ GR + VN
Sbjct: 37 IINDRETGRSRGFGFVTFANEKSMNDAIEAMNGQDLDGRNITVN 80
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 11/150 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL----- 61
V DR TG+SRGF +V +T E A + L+G+E GR + ++ S++
Sbjct: 328 VQMDRNTGKSRGFGYVEFATTEAVEAALL-LNGKEIDGRPVNIDKSEQKDKGAAREKRAE 386
Query: 62 -----YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
+E LFVGNLSW T + + + F E+G+V R+ D E+GR +G+G+V ++
Sbjct: 387 KFGDSASEPSAVLFVGNLSWDCTEDQVWEVFGEHGDVKSVRLPTDRETGRPKGFGYVEFT 446
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ A E L+G E+ GR +R+ +Q R
Sbjct: 447 DIETAKKAFEGLSGTEVAGRPIRLDYSQPR 476
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG LSW+V + L Q F E G V+ ARV D +G+SRG+G+V ++T +E AL L
Sbjct: 299 IFVGRLSWNVDNDWLAQEFAECGEVISARVQMDRNTGKSRGFGYVEFATTEAVEAAL-LL 357
Query: 129 NGVELEGRAMRVSLAQGR 146
NG E++GR + + ++ +
Sbjct: 358 NGKEIDGRPVNIDKSEQK 375
>gi|357445711|ref|XP_003593133.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355482181|gb|AES63384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 491
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 63 AETD-FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
++TD F+ F+G L+WS + L AF++YG +V A+V+ D SGRSRG+GFV + K M
Sbjct: 224 SDTDEFRCFIGGLAWSTSDRRLKDAFEKYGKLVEAKVVVDKFSGRSRGFGFVTFDDKEAM 283
Query: 122 ETALESLNGVELEGRAMRVSLAQGRRS 148
E A+E++NG++L+GR + V AQ + S
Sbjct: 284 EEAIEAMNGIDLDGRTITVDKAQPQGS 310
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
L + V+ D+ +GRSRGF FVT E IE ++G + GR + V DK +P+
Sbjct: 255 LVEAKVVVDKFSGRSRGFGFVTFDDKEAMEEAIEAMNGIDLDGRTITV---DKAQPQ 308
>gi|164661105|ref|XP_001731675.1| hypothetical protein MGL_0943 [Malassezia globosa CBS 7966]
gi|159105576|gb|EDP44461.1| hypothetical protein MGL_0943 [Malassezia globosa CBS 7966]
Length = 367
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 84/148 (56%), Gaps = 14/148 (9%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYL--GRILRVNFSDKPKPKL 59
++ TV+ D +GRSRGFAFVT S + NAV+ RE+ G+I+ PK +
Sbjct: 25 VTSCTVMRDGASGRSRGFAFVTFSDPKSVNAVMV----REHFLDGKII------DPKRAI 74
Query: 60 PLYAETDF-KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
P ++ K FVG L +VT +S Q FQ++G+V+ + V+ D ++GR RG+GFV +
Sbjct: 75 PRPEQSKTQKCFVGGLPQTVTQDSFKQLFQQFGHVLDSTVMMDKDTGRPRGFGFVTFEND 134
Query: 119 AEMETALESLNGVELEGRAMRVSLAQGR 146
+E L + + L+G+ + V AQ R
Sbjct: 135 DGVENTL-AHQPLLLDGKQIEVKRAQSR 161
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
+FVG L+W ESL + F ++G V V+ DG SGRSRG+ FV +S
Sbjct: 1 MFVGGLNWDTDEESLRRYFGQFGPVTSCTVMRDGASGRSRGFAFVTFS 48
>gi|238879474|gb|EEQ43112.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 399
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-----------DKP 55
V+ +R TG+SRG+ +V + +E + G+E GR + ++ S D+
Sbjct: 199 VIMERATGKSRGYGYVDFESKSAAEKALEEMQGKEIDGRPINLDMSTGKPHASKSNNDRA 258
Query: 56 KPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
K + LF+GNLS++ ++L F EYGNV+ RV ++ + +G+G+V +
Sbjct: 259 KQYGDSQSPPSDTLFIGNLSFNANRDNLFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQF 318
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQGR 146
S+ E + ALE++NG +EGR R+ + R
Sbjct: 319 SSVDEAKAALEAMNGEYIEGRPCRLDFSTPR 349
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVG LSW++ L + F+ G V+GARV+ + +G+SRGYG+V + +K+ E ALE +
Sbjct: 170 LFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFESKSAAEKALEEM 229
Query: 129 NGVELEGRAMRVSLAQGR 146
G E++GR + + ++ G+
Sbjct: 230 QGKEIDGRPINLDMSTGK 247
>gi|68473894|ref|XP_719050.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|68474099|ref|XP_718946.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440741|gb|EAL00044.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440849|gb|EAL00151.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
Length = 400
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-----------DKP 55
V+ +R TG+SRG+ +V + +E + G+E GR + ++ S D+
Sbjct: 199 VIMERATGKSRGYGYVDFESKSAAEKALEEMQGKEIDGRPINLDMSTGKPHASKSNNDRA 258
Query: 56 KPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
K + LF+GNLS++ ++L F EYGNV+ RV ++ + +G+G+V +
Sbjct: 259 KQYGDSQSPPSDTLFIGNLSFNANRDNLFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQF 318
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQGR 146
S+ E + ALE++NG +EGR R+ + R
Sbjct: 319 SSVDEAKAALEAMNGEYIEGRPCRLDFSTPR 349
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVG LSW++ L + F+ G V+GARV+ + +G+SRGYG+V + +K+ E ALE +
Sbjct: 170 LFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFESKSAAEKALEEM 229
Query: 129 NGVELEGRAMRVSLAQGR 146
G E++GR + + ++ G+
Sbjct: 230 QGKEIDGRPINLDMSTGK 247
>gi|7446337|pir||T15542 hypothetical protein C18A3.5 - Caenorhabditis elegans
Length = 448
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/135 (34%), Positives = 78/135 (57%), Gaps = 1/135 (0%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP-KPKLPLYAETDFK 68
D ETG + +AFV S + ++ ++ R L R ++VN++ +P + + + F
Sbjct: 117 DTETGSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFH 176
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG+LS V + L +AFQ +G+V A+V+ D + +S+GYGFV Y + E E A+E +
Sbjct: 177 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 236
Query: 129 NGVELEGRAMRVSLA 143
NG L R +R + A
Sbjct: 237 NGQWLGRRTIRTNWA 251
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 22/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-----DKPK 56
+S V+ D T +S+G+ FV+ E+ IE ++G+ R +R N++ D+ K
Sbjct: 201 VSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEK 260
Query: 57 PKL-------PLYAET---DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR 106
P +Y +T + ++VGN++ S+T + + Q F +G + R+ +
Sbjct: 261 PSHYNEKSYDEIYNQTSGDNTSVYVGNIA-SLTEDEIRQGFASFGRITEVRIF------K 313
Query: 107 SRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 141
+GY FV + K A+ +N ++ G+ +R S
Sbjct: 314 MQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCS 348
>gi|407927556|gb|EKG20446.1| hypothetical protein MPH_02256 [Macrophomina phaseolina MS6]
Length = 485
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 2/144 (1%)
Query: 5 LTVLYDRETGRSRG--FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLY 62
+ ++ D+ +S+G + FV ++ L+GR +RVN++ + +
Sbjct: 116 VKIIPDKNKFQSKGLNYGFVEYDDPGTAERAMQTLNGRRVHQSEIRVNWAYQSNNQPKED 175
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
F +FVG+LS V E L QAF +G V ARV++D ++GRSRGYGFV + + + E
Sbjct: 176 TSNHFHIFVGDLSNEVNDEVLLQAFSAFGQVSEARVMWDMKTGRSRGYGFVAFRDRGDAE 235
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
AL S++G L RA+R + A +
Sbjct: 236 KALSSMDGEWLGSRAIRCNWANQK 259
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 206 VSEARVMWDMKTGRSRGYGFVAFRDRGDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 264
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + +++ +VGNL+ T L
Sbjct: 265 SQQQAMASMGMTPTTPYGHHHFPTHGVQSYEMVVNQTPQWQTTCYVGNLTPYTTQSDLVP 324
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ F+ T A+ LNG + GR ++ S +
Sbjct: 325 LFQNFGYVVETRFQSD------RGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 378
Query: 146 R 146
R
Sbjct: 379 R 379
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 126
L+VG L +T + L Q F+ G+VV +++ D +S+G YGFV Y E A++
Sbjct: 89 LYVGGLDPRITEDVLRQIFETAGHVVSVKIIPDKNKFQSKGLNYGFVEYDDPGTAERAMQ 148
Query: 127 SLNGVELEGRAMRVSLA 143
+LNG + +RV+ A
Sbjct: 149 TLNGRRVHQSEIRVNWA 165
>gi|112994|sp|P10979.1|GRPA_MAIZE RecName: Full=Glycine-rich RNA-binding, abscisic acid-inducible
protein
gi|22313|emb|CAA31077.1| ABA-inducible gene protein [Zea mays]
gi|195605904|gb|ACG24782.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195617536|gb|ACG30598.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195620254|gb|ACG31957.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637320|gb|ACG38128.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|226091|prf||1410284A abscisic acid inducible gene
Length = 157
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 60/82 (73%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ FVG L+W+ + ESL AF YG ++ ++V+ D E+GRSRG+GFV +S++ M
Sbjct: 4 ADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSML 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E++NG EL+GR + V+ AQ
Sbjct: 64 DAIENMNGKELDGRNITVNQAQ 85
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
V+ DRETGRSRGF FVT S+ IEN++G+E GR + VN
Sbjct: 39 VITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVN 82
>gi|413933457|gb|AFW68008.1| responsive to abscisic acid15 [Zea mays]
Length = 159
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 60/82 (73%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ FVG L+W+ + ESL AF YG ++ ++V+ D E+GRSRG+GFV +S++ M
Sbjct: 4 ADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSML 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E++NG EL+GR + V+ AQ
Sbjct: 64 DAIENMNGKELDGRNITVNQAQ 85
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
V+ DRETGRSRGF FVT S+ IEN++G+E GR + VN
Sbjct: 39 VITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVN 82
>gi|226491203|ref|NP_001151562.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195647746|gb|ACG43341.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 60/82 (73%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ FVG L+W+ + ESL AF YG ++ ++V+ D E+GRSRG+GFV +S++ M
Sbjct: 4 ADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSML 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E++NG EL+GR + V+ AQ
Sbjct: 64 DAIENMNGKELDGRNITVNQAQ 85
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
V+ DRETGRSRGF FVT S+ IEN++G+E GR + VN
Sbjct: 39 VITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVN 82
>gi|195645042|gb|ACG41989.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 142
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 60/82 (73%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ FVG L+W+ + ESL AF YG ++ ++V+ D E+GRSRG+GFV +S++ M
Sbjct: 4 ADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSML 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E++NG EL+GR + V+ AQ
Sbjct: 64 DAIENMNGKELDGRNITVNQAQ 85
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
V+ DRETGRSRGF FVT S+ IEN++G+E GR + VN
Sbjct: 39 VITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVN 82
>gi|194700358|gb|ACF84263.1| unknown [Zea mays]
gi|413933458|gb|AFW68009.1| responsive to abscisic acid15 [Zea mays]
Length = 140
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 60/82 (73%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ FVG L+W+ + ESL AF YG ++ ++V+ D E+GRSRG+GFV +S++ M
Sbjct: 4 ADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSML 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E++NG EL+GR + V+ AQ
Sbjct: 64 DAIENMNGKELDGRNITVNQAQ 85
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
V+ DRETGRSRGF FVT S+ IEN++G+E GR + VN
Sbjct: 39 VITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVN 82
>gi|429863469|gb|ELA37920.1| nuclear and cytoplasmic polyadenylated rna-binding protein pub1
[Colletotrichum gloeosporioides Nara gc5]
Length = 479
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/135 (34%), Positives = 72/135 (53%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+ + + FV ++ L+GR +RVN++ + F +FV
Sbjct: 121 KNAKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTSSKEDTSNHFHIFV 180
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS V E LTQAF +G+V ARV++D ++GRSRGYGFV + + + E AL S++G
Sbjct: 181 GDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGE 240
Query: 132 ELEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 241 WLGSRAIRCNWANQK 255
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKP-- 57
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P
Sbjct: 202 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 260
Query: 58 --------------------KLPLYAETDFKL------------FVGNLSWSVTTESLTQ 85
+ P + +++ +VGNL+ T +
Sbjct: 261 AQQQAMQAMGLTPTTPFGHHQFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVP 320
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ + A+ +NG + GR ++ S +
Sbjct: 321 LFQNFGYVVESRFQAD------RGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWGKD 374
Query: 146 R 146
+
Sbjct: 375 K 375
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+++L
Sbjct: 88 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGYNYGFVEYDDPGAAERAMQTL 146
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 147 NGRRVHQSEIRVNWA 161
>gi|350635107|gb|EHA23469.1| hypothetical protein ASPNIDRAFT_173997 [Aspergillus niger ATCC
1015]
Length = 235
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 20/164 (12%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN----------- 50
LS + ++ +R+TGRSRGF +V + D E G E GR++ ++
Sbjct: 27 LSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAKKGAEIDGRVINLDYATGRPANKDQ 86
Query: 51 ---FSDKPKPKLPLYA-----ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDG 102
F D+ + + E+D LFVGNL + +S+ + F E G+++G R+ D
Sbjct: 87 QGGFKDRANARARSFGDQASPESD-TLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDP 145
Query: 103 ESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+SGR +G+G+V YS+ E A L G +L GR +R+ + R
Sbjct: 146 DSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDFSTPR 189
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
LFVGNLSW+V L F+ +G + G R++ + ++GRSRG+G+V Y+ + A E+
Sbjct: 2 NLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEA 61
Query: 128 LNGVELEGRAMRVSLAQGR 146
G E++GR + + A GR
Sbjct: 62 KKGAEIDGRVINLDYATGR 80
>gi|218193471|gb|EEC75898.1| hypothetical protein OsI_12955 [Oryza sativa Indica Group]
Length = 139
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 59/85 (69%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ +++ FVG L+W+ SL AF YG ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRD 64
Query: 124 ALESLNGVELEGRAMRVSLAQGRRS 148
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 65 AIEGMNGKELDGRNITVNEAQSRRS 89
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT S+ + IE ++G+E GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVN 82
>gi|212276175|ref|NP_001130201.1| hypothetical protein [Zea mays]
gi|194688532|gb|ACF78350.1| unknown [Zea mays]
gi|414887483|tpg|DAA63497.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
gi|414887484|tpg|DAA63498.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
Length = 308
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 43 LGRILRVNFSDKPKPKL-PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD 101
+G LR + P L P+ + KLFVG LS++ +L AF E+GNV+ AR++ D
Sbjct: 7 IGNALRRTLAPTCSPLLQPVRCMSSSKLFVGGLSFATDETTLKDAFSEFGNVLEARIIID 66
Query: 102 GESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
ESGRSRG+GF+ +++ E A+ S++G EL+GR +RV+ A R
Sbjct: 67 RESGRSRGFGFITFTSTEEASAAMTSMDGKELQGRNIRVNHANER 111
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 37/48 (77%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
++ DRE+GRSRGF F+T ++ E+ +A + ++DG+E GR +RVN +++
Sbjct: 63 IIIDRESGRSRGFGFITFTSTEEASAAMTSMDGKELQGRNIRVNHANE 110
>gi|226499830|ref|NP_001140942.1| uncharacterized protein LOC100273020 [Zea mays]
gi|194701856|gb|ACF85012.1| unknown [Zea mays]
Length = 473
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 15/160 (9%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF-------SDK 54
LS + ++ +RETGRSRGF +V + A E E GR + +++ S
Sbjct: 251 LSGVRIMTERETGRSRGFGYVEYADASSAKAAYEAKKDTELDGRTINLDYAKPRDANSQA 310
Query: 55 PKPKLPLYAET--------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR 106
P+ K A + LFVGNL + V ++ + F+ G + G R+ D E+GR
Sbjct: 311 PREKAQTRARSFGDQTSPESNTLFVGNLVFGVDENAVREVFEGQGQIQGVRLPTDAETGR 370
Query: 107 SRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+GYG+V +S+ E AL L G ++ GRA+R+ + R
Sbjct: 371 PKGYGYVEFSSVDEARQALNELQGTDIGGRAIRLDFSTPR 410
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ LFVGNLSW+V E L + F+ +G + G R++ + E+GRSRG+G+V Y+ + +
Sbjct: 221 ADNSPNLFVGNLSWNVDEEWLRREFESFGELSGVRIMTERETGRSRGFGYVEYADASSAK 280
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A E+ EL+GR + + A+ R
Sbjct: 281 AAYEAKKDTELDGRTINLDYAKPR 304
>gi|134057335|emb|CAK44534.1| unnamed protein product [Aspergillus niger]
Length = 538
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 32/170 (18%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN----------- 50
LS + ++ +R+TGRSRGF +V + D E G E GR++ ++
Sbjct: 313 LSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAKKGAEIDGRVINLDYATGRPANKDQ 372
Query: 51 --------------FSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 96
F D+ P E+D LFVGNL + +S+ + F E G+++G
Sbjct: 373 QGGFKDRANARARSFGDQASP------ESDT-LFVGNLPFDANEDSVGELFGEKGSILGI 425
Query: 97 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
R+ D +SGR +G+G+V YS+ E A L G +L GR +R+ + R
Sbjct: 426 RLPTDPDSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDFSTPR 475
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW+V L F+ +G + G R++ + ++GRSRG+G+V Y+ + A E+
Sbjct: 289 LFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAK 348
Query: 129 NGVELEGRAMRVSLAQGR 146
G E++GR + + A GR
Sbjct: 349 KGAEIDGRVINLDYATGR 366
>gi|302791061|ref|XP_002977297.1| hypothetical protein SELMODRAFT_107195 [Selaginella moellendorffii]
gi|300154667|gb|EFJ21301.1| hypothetical protein SELMODRAFT_107195 [Selaginella moellendorffii]
Length = 180
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 58/83 (69%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+F+ F+G LSWS T SL AF+ YG+++ A+V++D E+ RSRG+GFV + + ME A+
Sbjct: 4 EFRCFIGGLSWSTTDRSLETAFRPYGSIIEAKVVFDRETNRSRGFGFVTFEDEESMENAI 63
Query: 126 ESLNGVELEGRAMRVSLAQGRRS 148
++ ELEGR++ VS A+ RS
Sbjct: 64 RKMHNQELEGRSITVSKAEPPRS 86
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK 56
V++DRET RSRGF FVT E I + +E GR + V+ ++ P+
Sbjct: 36 VVFDRETNRSRGFGFVTFEDEESMENAIRKMHNQELEGRSITVSKAEPPR 85
>gi|406694599|gb|EKC97923.1| subunit of cleavage factor I, Hrp1p [Trichosporon asahii var.
asahii CBS 8904]
Length = 466
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 55/144 (38%), Positives = 83/144 (57%), Gaps = 19/144 (13%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVI---ENLDGREYLGRILRVNFSDKPKPKLPLY 62
T++ D TGRSRGFAF+T +V AV+ LDG+ + I R
Sbjct: 152 TIMRD-PTGRSRGFAFLTFKSVSSVEAVLAKDHQLDGK--MRAIPRAEH----------- 197
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
E K+FVG L+ SVT++SL Q +YG V+ A V++D +GRS+G+ F ++ ++ +E
Sbjct: 198 -ERTAKVFVGGLAPSVTSDSLKQFLSQYGKVMDATVMFDRLNGRSKGFAFATFADESGVE 256
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A++ +GVELEGR + + AQ R
Sbjct: 257 NAMQH-SGVELEGRQIEIKKAQPR 279
>gi|358367745|dbj|GAA84363.1| hypothetical protein AKAW_02478 [Aspergillus kawachii IFO 4308]
Length = 546
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 32/170 (18%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN----------- 50
LS + ++ +R+TGRSRGF +V + D E G E GR++ ++
Sbjct: 321 LSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAKKGAEIDGRVINLDYATGRPANKDQ 380
Query: 51 --------------FSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 96
F D+ P E+D LFVGNL + +S+ + F E G+++G
Sbjct: 381 QGGFKDRANARARSFGDQASP------ESDT-LFVGNLPFDANEDSVGELFGEKGSILGI 433
Query: 97 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
R+ D +SGR +G+G+V YS+ E A L G +L GR +R+ + R
Sbjct: 434 RLPTDPDSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDFSTPR 483
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW+V L F+ +G + G R++ + ++GRSRG+G+V Y+ + A E+
Sbjct: 297 LFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAK 356
Query: 129 NGVELEGRAMRVSLAQGR 146
G E++GR + + A GR
Sbjct: 357 KGAEIDGRVINLDYATGR 374
>gi|255945479|ref|XP_002563507.1| Pc20g10130 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588242|emb|CAP86342.1| Pc20g10130 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 95
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 58/79 (73%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSW + ESL QAF E+G +V + V+ D E+GRSRG+GFV YS+ E E A+ +
Sbjct: 3 KIYVGNLSWHTSDESLRQAFGEFGQIVDSIVMVDRETGRSRGFGFVTYSSAEEAEAAINA 62
Query: 128 LNGVELEGRAMRVSLAQGR 146
LN +L+GR +RV+LA R
Sbjct: 63 LNEQDLDGRRIRVNLANAR 81
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V+ DRETGRSRGF FVT S+ E+ A I L+ ++ GR +RVN ++
Sbjct: 33 VMVDRETGRSRGFGFVTYSSAEEAEAAINALNEQDLDGRRIRVNLAN 79
>gi|226491121|ref|NP_001143351.1| uncharacterized protein LOC100275970 [Zea mays]
gi|195618716|gb|ACG31188.1| hypothetical protein [Zea mays]
Length = 295
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 43 LGRILRVNFSDKPKPKL-PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD 101
+G LR + P L P+ + KLFVG LS++ +L AF E+GNV+ AR++ D
Sbjct: 7 IGNALRRTLAPTCSPLLQPVRCMSSSKLFVGGLSFATDETTLKDAFSEFGNVLEARIIID 66
Query: 102 GESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
ESGRSRG+GF+ +++ E A+ S++G EL+GR +RV+ A R
Sbjct: 67 RESGRSRGFGFITFTSTEEASAAMTSMDGKELQGRNIRVNHANER 111
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 37/48 (77%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
++ DRE+GRSRGF F+T ++ E+ +A + ++DG+E GR +RVN +++
Sbjct: 63 IIIDRESGRSRGFGFITFTSTEEASAAMTSMDGKELQGRNIRVNHANE 110
>gi|317027210|ref|XP_003188595.1| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 536
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 20/164 (12%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN----------- 50
LS + ++ +R+TGRSRGF +V + D E G E GR++ ++
Sbjct: 311 LSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAKKGAEIDGRVINLDYATGRPANKDQ 370
Query: 51 ---FSDKPKPKLPLY-----AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDG 102
F D+ + + E+D LFVGNL + +S+ + F E G+++G R+ D
Sbjct: 371 QGGFKDRANARARSFGDQASPESDT-LFVGNLPFDANEDSVGELFGEKGSILGIRLPTDP 429
Query: 103 ESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+SGR +G+G+V YS+ E A L G +L GR +R+ + R
Sbjct: 430 DSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDFSTPR 473
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW+V L F+ +G + G R++ + ++GRSRG+G+V Y+ + A E+
Sbjct: 287 LFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAK 346
Query: 129 NGVELEGRAMRVSLAQGR 146
G E++GR + + A GR
Sbjct: 347 KGAEIDGRVINLDYATGR 364
>gi|317027208|ref|XP_001400395.2| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 539
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 20/164 (12%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN----------- 50
LS + ++ +R+TGRSRGF +V + D E G E GR++ ++
Sbjct: 314 LSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAKKGAEIDGRVINLDYATGRPANKDQ 373
Query: 51 ---FSDKPKPKLPLY-----AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDG 102
F D+ + + E+D LFVGNL + +S+ + F E G+++G R+ D
Sbjct: 374 QGGFKDRANARARSFGDQASPESDT-LFVGNLPFDANEDSVGELFGEKGSILGIRLPTDP 432
Query: 103 ESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+SGR +G+G+V YS+ E A L G +L GR +R+ + R
Sbjct: 433 DSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDFSTPR 476
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW+V L F+ +G + G R++ + ++GRSRG+G+V Y+ + A E+
Sbjct: 290 LFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAK 349
Query: 129 NGVELEGRAMRVSLAQGR 146
G E++GR + + A GR
Sbjct: 350 KGAEIDGRVINLDYATGR 367
>gi|331241781|ref|XP_003333538.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312528|gb|EFP89119.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 179
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 57/76 (75%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNL+W+ + SL AF ++G+V+ A V+ D E+GRSRG+GF+ + +A+ A+E+
Sbjct: 9 KLFVGNLAWTTDSGSLKSAFGQFGDVIDAIVMQDRETGRSRGFGFITFKEEADAPGAIEA 68
Query: 128 LNGVELEGRAMRVSLA 143
LNG EL+GR +RV+ A
Sbjct: 69 LNGQELDGREIRVNYA 84
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V+ DRETGRSRGF F+T D IE L+G+E GR +RVN+++
Sbjct: 39 VMQDRETGRSRGFGFITFKEEADAPGAIEALNGQELDGREIRVNYAN 85
>gi|399931803|gb|AFP57451.1| RNA-binding glycine-rich protein [Nicotiana plumbaginifolia]
Length = 144
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LSW +SL AF +G+VV ARV+ D +SGR RG+GFV +S A+++
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRPRGFGFVNFSDDECANEAIKA 98
Query: 128 LNGVELEGRAMRVSLAQGR 146
++G EL+GR +RVS+AQ R
Sbjct: 99 MDGQELQGRNIRVSIAQER 117
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+ DR++GR RGF FV S E N I+ +DG+E GR +RV+ + + P+
Sbjct: 69 VIVDRDSGRPRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQERAPR 120
>gi|388583201|gb|EIM23503.1| hypothetical protein WALSEDRAFT_67167 [Wallemia sebi CBS 633.66]
Length = 89
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 54/81 (66%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K+++ NLSWS E L +AF +G + V+ D ++GRSRG+GFV Y+ E +ALES
Sbjct: 6 KIYISNLSWSTNDEDLARAFSPFGQISDYIVMKDRQTGRSRGFGFVTYANDREASSALES 65
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
+N VEL+GR +RV+ A R S
Sbjct: 66 MNEVELDGRRIRVNYAHARSS 86
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
+S V+ DR+TGRSRGF FVT + + ++ +E+++ E GR +RVN++
Sbjct: 31 ISDYIVMKDRQTGRSRGFGFVTYANDREASSALESMNEVELDGRRIRVNYA 81
>gi|342870153|gb|EGU73450.1| hypothetical protein FOXB_16088 [Fusarium oxysporum Fo5176]
Length = 474
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/135 (34%), Positives = 71/135 (52%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+ R + FV ++ L+GR +RVN++ + F +FV
Sbjct: 119 KNARGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTTNKEDTSNHFHIFV 178
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS V E L QAF +G+V ARV++D ++GRSRGYGFV + + E E AL S++G
Sbjct: 179 GDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGE 238
Query: 132 ELEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 239 WLGSRAIRCNWANQK 253
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKP-- 57
+S+ V++D +TGRSRG+ FV + + ++DG E+LG R +R N+++ K +P
Sbjct: 200 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDG-EWLGSRAIRCNWANQKGQPSM 258
Query: 58 --------------------KLPLYAETDFK------------LFVGNLSWSVTTESLTQ 85
+ P + ++ ++VGNL+ T +
Sbjct: 259 AQQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPSWQTTVYVGNLTPYTTPNDVVP 318
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ T A+ +NG + GR ++ S +
Sbjct: 319 LFQNFGFVVESRFQAD------RGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKD 372
Query: 146 R 146
+
Sbjct: 373 K 373
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L++G L VT E L Q F+ G+V +++ D ++ R YGFV Y E A+++L
Sbjct: 86 LYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPD-KNARGYNYGFVEYDDPGAAERAMQTL 144
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 145 NGRRVHQSEIRVNWA 159
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 58/79 (73%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLF+G +S+S +SL +AF +YG VV AR++ D E+GRSRG+GF+ Y++ E +A+++
Sbjct: 43 KLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQA 102
Query: 128 LNGVELEGRAMRVSLAQGR 146
L+G +L GR +RV+ A R
Sbjct: 103 LDGQDLHGRPIRVNYANER 121
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
++ DRETGRSRGF F+T ++VE+ ++ I+ LDG++ GR +RVN++++ +P+
Sbjct: 73 IIMDRETGRSRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYANE-RPR 123
>gi|378733387|gb|EHY59846.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 503
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 83/156 (53%), Gaps = 11/156 (7%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD------KP 55
LS + ++ DR+TGRS+GF +V D G E GR L V+F++ KP
Sbjct: 283 LSGVRLMTDRQTGRSKGFGYVEFVDAADAAKAYAAKQGAELDGRPLNVDFANARSNDNKP 342
Query: 56 -----KPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 110
K E LF+GNLS+ T E +++AF +G V+G R+ D E+G +G+
Sbjct: 343 ADNRRKSYGDQLGEPTDTLFLGNLSFDCTQEDVSEAFAPHGTVMGIRLPTDRETGAPKGF 402
Query: 111 GFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
G+V + + E + ALE++ G ++ R +R+ +Q R
Sbjct: 403 GYVTFGSVDEAKAALEAMQGGYIKNRPIRLDYSQPR 438
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW+V L F+E+G + G R++ D ++GRS+G+G+V + A+ A +
Sbjct: 259 LFVGNLSWNVDENWLRSEFEEFGELSGVRLMTDRQTGRSKGFGYVEFVDAADAAKAYAAK 318
Query: 129 NGVELEGRAMRVSLAQGR 146
G EL+GR + V A R
Sbjct: 319 QGAELDGRPLNVDFANAR 336
>gi|380478106|emb|CCF43782.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 482
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/135 (34%), Positives = 72/135 (53%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+ + + FV ++ L+GR +RVN++ + F +FV
Sbjct: 122 KNAKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTSSKEDTSNHFHIFV 181
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS V E LTQAF +G+V ARV++D ++GRSRGYGFV + + + E AL S++G
Sbjct: 182 GDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGE 241
Query: 132 ELEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 242 WLGSRAIRCNWANQK 256
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKP-- 57
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P
Sbjct: 203 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 261
Query: 58 --------------------KLPLYAETDFKL------------FVGNLSWSVTTESLTQ 85
+ P + +++ +VGNL+ T +
Sbjct: 262 AQQQAMQAMGLTPTTPFGHHQFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVP 321
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ + A+ +NG + GR ++ S +
Sbjct: 322 LFQNFGYVVESRFQAD------RGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWGKD 375
Query: 146 R 146
+
Sbjct: 376 K 376
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+++L
Sbjct: 89 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGYNYGFVEYDDPGAAERAMQTL 147
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 148 NGRRVHQSEIRVNWA 162
>gi|310798412|gb|EFQ33305.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 482
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/135 (34%), Positives = 72/135 (53%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+ + + FV ++ L+GR +RVN++ + F +FV
Sbjct: 122 KNAKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTSSKEDTSNHFHIFV 181
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS V E LTQAF +G+V ARV++D ++GRSRGYGFV + + + E AL S++G
Sbjct: 182 GDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGE 241
Query: 132 ELEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 242 WLGSRAIRCNWANQK 256
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKP-- 57
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P
Sbjct: 203 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 261
Query: 58 --------------------KLPLYAETDFKL------------FVGNLSWSVTTESLTQ 85
+ P + +++ +VGNL+ T +
Sbjct: 262 AQQQAMQAMGLTPTTPFGHHQFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVP 321
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ + A+ +NG + GR ++ S +
Sbjct: 322 LFQNFGYVVESRFQAD------RGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWGKD 375
Query: 146 R 146
+
Sbjct: 376 K 376
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+++L
Sbjct: 89 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGYNYGFVEYDDPGAAERAMQTL 147
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 148 NGRRVHQSEIRVNWA 162
>gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 58/79 (73%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGNLSW+ T E+L Q F E+G V + ++ D ++GR+RG+GFV +ST+ + A+++
Sbjct: 3 KLYVGNLSWNTTDETLRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAVDA 62
Query: 128 LNGVELEGRAMRVSLAQGR 146
LN EL+GR +RV++A R
Sbjct: 63 LNEQELDGRRIRVNVANAR 81
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
++ DR+TGR+RGF FVT ST E A ++ L+ +E GR +RVN ++
Sbjct: 33 IMRDRDTGRARGFGFVTFSTEEQATAAVDALNEQELDGRRIRVNVAN 79
>gi|440899695|gb|ELR50961.1| Polyadenylate-binding protein 1-like protein, partial [Bos
grunniens mutus]
Length = 618
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 19/151 (12%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN---------------FSDKPKP 57
+G SRGF FV E+ + N++GRE GR+L V F +
Sbjct: 227 SGHSRGFGFVNFEKHEEAQKAVVNMNGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQD 286
Query: 58 KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
+L Y + L+V NL S+ E L + F YG + A+V+ +G G S+G+GFVC+S+
Sbjct: 287 RLTRYQGVN--LYVKNLDDSIDDEKLRKEFSPYGVITSAKVMTEG--GHSKGFGFVCFSS 342
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQGRRS 148
E A+ +NG + + + V+LA+GR++
Sbjct: 343 PEEATKAVTEMNGRIVGTKPLYVALAEGRKA 373
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A++ D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEVIKGQPIRIMWSQR-DPGLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E G SRG+GFV + T + A
Sbjct: 99 GN--IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCD-EHG-SRGFGFVHFETHEAAQNA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+ ++NG+ L R + V + RR
Sbjct: 155 ISTMNGMLLNDRKVFVGHFKSRR 177
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P PL + L+VG+L VT L + F G ++ RV D + RS GY ++ +
Sbjct: 6 PGYPLAS-----LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
A+ E AL+++N ++G+ +R+ +Q
Sbjct: 61 QPADAERALDTMNFEVIKGQPIRIMWSQ 88
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
E G + + FV A ++ ++GR LG+ ++VN++ P + +FV
Sbjct: 48 EHGGNDPYCFVEFVEHSHAAAALQTMNGRMILGKEVKVNWATTPS-SMKKDTSNHHHVFV 106
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS V T L AF +G + ARV+ D ++ +S+GYGFV + K + E A++ +NG
Sbjct: 107 GDLSSEVDTPDLKAAFAPFGQISDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQGMNGQ 166
Query: 132 ELEGRAMRVSLA 143
L GRA+R + A
Sbjct: 167 WLSGRAIRTNWA 178
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 23/159 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D +T +S+G+ FV+ D I+ ++G+ GR +R N++ + KP P
Sbjct: 128 ISDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQGMNGQWLSGRAIRTNWATR-KPPPPR 186
Query: 62 YAETDFKL----------------FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG 105
ET +L ++G ++ +T + + F YG++ R+ D
Sbjct: 187 QPETTKQLSYDDVCNSSSYTNTTVYIGGVTTGLTEGKMRETFSHYGHIQEVRIFPD---- 242
Query: 106 RSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+GY F+ + T A+ S+NG ++ G ++ S +
Sbjct: 243 --KGYAFIRFMTHESAAHAIVSVNGSQINGHMVKCSWGK 279
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNL VT + Q F + G +++ E G + Y FV + + AL+++
Sbjct: 16 LYVGNLDRQVTEAFILQLFGQIGPCKSCKMI--AEHGGNDPYCFVEFVEHSHAAAALQTM 73
Query: 129 NGVELEGRAMRVSLA 143
NG + G+ ++V+ A
Sbjct: 74 NGRMILGKEVKVNWA 88
>gi|331241775|ref|XP_003333535.1| hypothetical protein PGTG_14957 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312525|gb|EFP89116.1| small subunit ribosomal protein S19 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 206
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 56/76 (73%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNL+W+ + SL AF ++G+VV A V+ D E+GRSRG+GF+ + +A A+E+
Sbjct: 33 KLFVGNLAWTTDSGSLKSAFGQFGDVVDAIVMQDRETGRSRGFGFITFKEEAAAPGAIEA 92
Query: 128 LNGVELEGRAMRVSLA 143
LNG EL+GR +RV+ A
Sbjct: 93 LNGQELDGREIRVNYA 108
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V+ DRETGRSRGF F+T IE L+G+E GR +RVN+++
Sbjct: 63 VMQDRETGRSRGFGFITFKEEAAAPGAIEALNGQELDGREIRVNYAN 109
>gi|302780311|ref|XP_002971930.1| hypothetical protein SELMODRAFT_172546 [Selaginella moellendorffii]
gi|300160229|gb|EFJ26847.1| hypothetical protein SELMODRAFT_172546 [Selaginella moellendorffii]
Length = 173
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 58/83 (69%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+F+ F+G LSWS T SL AF+ YG+++ A+V++D E+ RSRG+GFV + + ME A+
Sbjct: 4 EFRCFIGGLSWSTTDRSLETAFRPYGSIIEAKVVFDRETNRSRGFGFVTFEDEESMENAI 63
Query: 126 ESLNGVELEGRAMRVSLAQGRRS 148
++ ELEGR++ VS A+ RS
Sbjct: 64 RKMHNQELEGRSITVSKAEPPRS 86
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK 56
V++DRET RSRGF FVT E I + +E GR + V+ ++ P+
Sbjct: 36 VVFDRETNRSRGFGFVTFEDEESMENAIRKMHNQELEGRSITVSKAEPPR 85
>gi|340905400|gb|EGS17768.1| putative polyadenylated RNA protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 485
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 71/132 (53%)
Query: 15 RSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNL 74
R + FV ++ L+GR +RVN++ + F +FVG+L
Sbjct: 131 RGYNYGFVEYDDPGAAERAMQTLNGRRVHQNEIRVNWAYQSNNANKEDTSNHFHIFVGDL 190
Query: 75 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 134
S V E L QAF +G++ ARV++D ++GRSRGYGFV + +A+ E AL S++G L
Sbjct: 191 SNEVNDEVLWQAFSAFGSISEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLG 250
Query: 135 GRAMRVSLAQGR 146
RA+R + A +
Sbjct: 251 SRAIRCNWANQK 262
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 209 ISEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 267
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 268 HQQQAMQQMGMTPTTPYGHHHFPTHGIHSYDMVVNQTPAWQTTCYVGNLTPYTTQNDLVP 327
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R+ D RG+ F+ + A+ LNG + GR ++ S +
Sbjct: 328 LFQNFGYVVECRMQAD------RGFAFIKMDSHENAAMAICQLNGYMVNGRPLKCSWGKD 381
Query: 146 R 146
R
Sbjct: 382 R 382
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+V +++ D ++ R YGFV Y E A+++L
Sbjct: 95 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPD-KNHRGYNYGFVEYDDPGAAERAMQTL 153
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 154 NGRRVHQNEIRVNWA 168
>gi|440804413|gb|ELR25290.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 146
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 55/81 (67%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LSWS SL AF+++G V+ A+V+ D ++G+SRG+GFV +S+ E E A +
Sbjct: 4 KLFVGGLSWSTDDNSLRSAFEQHGEVIDAKVILDRDTGKSRGFGFVTFSSADEAEAAKGA 63
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
LN +L+GR +RV A R S
Sbjct: 64 LNQTDLDGREIRVDSASDRDS 84
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
V+ DR+TG+SRGF FVT S+ ++ A L+ + GR +RV+
Sbjct: 34 VILDRDTGKSRGFGFVTFSSADEAEAAKGALNQTDLDGREIRVD 77
>gi|378726298|gb|EHY52757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 481
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/133 (37%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
Query: 16 SRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGN 73
S+GF FV + L+GR +RVN++ + F +FVG+
Sbjct: 122 SKGFNYGFVEYDDPGAAERAMTTLNGRRVHQAEIRVNWAYQSNSTNKEDTSNHFHIFVGD 181
Query: 74 LSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVEL 133
LS V E L QAF +G+V ARV++D ++GRSRGYGFV + +A+ E AL S++G L
Sbjct: 182 LSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALASMDGEWL 241
Query: 134 EGRAMRVSLAQGR 146
RA+RV+ A +
Sbjct: 242 GSRAIRVNWANQK 254
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +RVN+++ K +P +
Sbjct: 201 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALASMDG-EWLGSRAIRVNWANQKGQPSI 259
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P +++ +VGNL+ T L
Sbjct: 260 SQQQAMAAMGMSPTTPFGHHHFPTQGIQSYEMVVNQTPAWQTTCYVGNLTPYTTQADLVP 319
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ F+ T A+ L+G + GR ++ S +
Sbjct: 320 LFQNFGYVVETRFQSD------RGFAFIKMDTHENAAMAICQLSGYNVNGRPLKCSWGKD 373
Query: 146 R 146
R
Sbjct: 374 R 374
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE---SGRSRGYGFVCYSTKAEMETAL 125
L+VG L VT + L Q F+ G+VV +++ D S + YGFV Y E A+
Sbjct: 83 LYVGGLDPRVTEDVLKQIFETTGHVVSVKIIPDKNAQFSSKGFNYGFVEYDDPGAAERAM 142
Query: 126 ESLNGVELEGRAMRVSLA 143
+LNG + +RV+ A
Sbjct: 143 TTLNGRRVHQAEIRVNWA 160
>gi|336271351|ref|XP_003350434.1| hypothetical protein SMAC_02147 [Sordaria macrospora k-hell]
gi|380090956|emb|CCC11489.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 495
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/138 (33%), Positives = 74/138 (53%)
Query: 9 YDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK 68
+D + + + FV ++ L+GR +RVN++ + + F
Sbjct: 138 HDAQQQKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNQNKEDTSGHFH 197
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG+LS V E L QAF +G+V ARV++D ++GRSRGYGFV + + + E AL S+
Sbjct: 198 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSM 257
Query: 129 NGVELEGRAMRVSLAQGR 146
+G L RA+R + A +
Sbjct: 258 DGEWLGSRAIRCNWANQK 275
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 222 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 280
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 281 AQQQAMQQMGLTPTTPYGHHHFPTHGVHSYDMIVAQTPAWQTTCYVGNLTPYTTQNDLVP 340
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ T A+ LNG ++ GR ++ S +
Sbjct: 341 LFQNFGYVVESRFQAD------RGFAFIKMDTHENAAMAICQLNGYQVNGRPLKCSWGKD 394
Query: 146 R 146
+
Sbjct: 395 K 395
Score = 42.0 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 14/89 (15%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVL--------------YDGESGRSRGYGFVC 114
L+VG L VT + L Q F+ G+V +++ +D + + YGFV
Sbjct: 93 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGKPGSPEQPHDAQQQKGYNYGFVE 152
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLA 143
Y E A+++LNG + +RV+ A
Sbjct: 153 YDDPGAAERAMQTLNGRRVHQSEIRVNWA 181
>gi|213406493|ref|XP_002174018.1| nucleolar protein [Schizosaccharomyces japonicus yFS275]
gi|212002065|gb|EEB07725.1| nucleolar protein [Schizosaccharomyces japonicus yFS275]
Length = 690
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/148 (37%), Positives = 79/148 (53%), Gaps = 12/148 (8%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF----------SDKPK 56
V+ D+ETG+S+GF FVT S ED +E L ++ GRILR+ F SDKPK
Sbjct: 38 VVTDKETGQSKGFGFVTFSLHEDAVRALEELKNKKLDGRILRMEFAAPRKRNGETSDKPK 97
Query: 57 PKLPLYAETDFKLFVGNLSWSVTT-ESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
+ +T +L V NL WSV + L F ++G V +V G GR G+ FV
Sbjct: 98 KPEQVRKDTRPRLIVRNLPWSVKKPKHLEPYFAKFGKVREIKVPTKG-GGRMCGFAFVWM 156
Query: 116 STKAEMETALESLNGVELEGRAMRVSLA 143
+A + A+++LN E++GR + V A
Sbjct: 157 KDRASAQKAMDTLNATEIDGRVVAVDWA 184
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 49/84 (58%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+T LFV NL++S T+ LT F V A V+ D E+G+S+G+GFV +S +
Sbjct: 4 KTPSSLFVRNLTFSTTSNDLTDFFSNAAPVKHAVVVTDKETGQSKGFGFVTFSLHEDAVR 63
Query: 124 ALESLNGVELEGRAMRVSLAQGRR 147
ALE L +L+GR +R+ A R+
Sbjct: 64 ALEELKNKKLDGRILRMEFAAPRK 87
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 36/58 (62%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
+F+ NL + T ++L Q F+++G + A+++ D +G S+G GFV + + + E LE
Sbjct: 287 IFIRNLLFETTEQALYQHFRQFGPLEYAKIVKDYATGLSQGRGFVKFRYQNDYEACLE 344
>gi|326512018|dbj|BAJ95990.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 830
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 80/149 (53%), Gaps = 12/149 (8%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLY---- 62
V+YDRE GRSRGF +VTM+TV++ + G E GR L V+ + P+ +
Sbjct: 600 VIYDREIGRSRGFGYVTMNTVQEAEKAVRIYHGSEVHGRRLTVSIA---APRGGTWVGAT 656
Query: 63 ---AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR--SRGYGFVCYST 117
+ + ++FV NL V L + F ++G VV ARV+Y+ G SRG+GFV +T
Sbjct: 657 RSQSGSPLRIFVCNLPSQVDNSRLEELFNKHGQVVDARVIYERREGASCSRGFGFVTMAT 716
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQGR 146
E A+ +LN LE + V +A+ R
Sbjct: 717 DEESYKAIRALNKQVLEEHTLVVRVARER 745
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
++V NL + + E L FQ G V+ ++V+YD E GRSRG+G+V +T E E A+
Sbjct: 571 VYVRNLPYHLDNEGLKLNFQHAGVVLFSKVIYDREIGRSRGFGYVTMNTVQEAEKAVRIY 630
Query: 129 NGVELEGRAMRVSLAQGR 146
+G E+ GR + VS+A R
Sbjct: 631 HGSEVHGRRLTVSIAAPR 648
>gi|302654951|ref|XP_003019271.1| hypothetical protein TRV_06675 [Trichophyton verrucosum HKI 0517]
gi|291182985|gb|EFE38626.1| hypothetical protein TRV_06675 [Trichophyton verrucosum HKI 0517]
Length = 496
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/145 (34%), Positives = 81/145 (55%), Gaps = 10/145 (6%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVI---ENLDGREYLGRILRVNFSDKPKPKLPL- 61
TV+ D +GRSRGF F+T + + N V+ LD R + ++ +++ PK +P
Sbjct: 29 TVMRDGASGRSRGFGFLTFTDPKTVNTVMVKEHYLDARSFADQLYKID----PKRAIPRD 84
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
E K+FVG +S T + Q F ++G VV A ++ D ++GR RG+GFV + ++A +
Sbjct: 85 EQERTSKIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAV 144
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
E L +E+ G+A+ V AQ R
Sbjct: 145 EATLSV--PLEIHGKAIEVKKAQPR 167
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+F+G L+W T +SL + F ++G V V+ DG SGRSRG+GF+ ++ + T +
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVM 57
>gi|2267593|gb|AAB63589.1| glycine-rich RNA-binding protein [Oryza sativa Indica Group]
Length = 165
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 59/85 (69%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ D++ FVG L+W+ SL AF YG ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVDYRCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRD 64
Query: 124 ALESLNGVELEGRAMRVSLAQGRRS 148
A+E ++G EL+GR + V+ AQ RRS
Sbjct: 65 AIEGMSGKELDGRNITVNEAQSRRS 89
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT S+ + IE + G+E GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFSSEQAMRDAIEGMSGKELDGRNITVN 82
>gi|422295561|gb|EKU22860.1| glycine-rich rna-binding protein 4 [Nannochloropsis gaditana
CCMP526]
Length = 186
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 62/93 (66%)
Query: 54 KPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
P+P P +E +KLFVGNLS+ + +L +AF+ +G +V + V+ + E+G+SRG+GFV
Sbjct: 17 PPRPTSPGQSEEGYKLFVGNLSFRTESAALREAFEPFGRIVFSTVIENRETGQSRGFGFV 76
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
Y K E + A+ ++ EL+GR +RV+ A+ R
Sbjct: 77 VYEQKHEADAAISRMDNAELDGRTLRVNFARPR 109
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
TV+ +RETG+SRGF FV + +A I +D E GR LRVNF+
Sbjct: 60 TVIENRETGQSRGFGFVVYEQKHEADAAISRMDNAELDGRTLRVNFA 106
>gi|326507746|dbj|BAJ86616.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 192
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 5/130 (3%)
Query: 15 RSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---LFV 71
++RG AFVTM + E+ + ++NL+ R ++V+F+ KPK K P + +FV
Sbjct: 33 KNRGLAFVTMGSEEEALSALKNLNLSTLNDRTIKVDFA-KPKKKQPAVPSAPVEKNVVFV 91
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR-SRGYGFVCYSTKAEMETALESLNG 130
GNL+W V + L + F V V++ + R S GYGFV +S+K E E A+ + NG
Sbjct: 92 GNLTWRVRSRHLRELFASTPGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNG 151
Query: 131 VELEGRAMRV 140
EL GR++ V
Sbjct: 152 KELMGRSINV 161
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-DKPK 56
+ + RS G+ FV+ S+ E+ A I +G+E +GR + V F D PK
Sbjct: 119 IFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNGKELMGRSINVMFKEDTPK 169
>gi|168037600|ref|XP_001771291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677380|gb|EDQ63851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 87
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 59/81 (72%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+F+ FVG L+W+ T + L QAF+ +G+V+ ++V+ D E+GRSRG+GF+ ++ + M A+
Sbjct: 1 EFRCFVGGLAWATTDDRLEQAFRPFGDVIQSKVISDRETGRSRGFGFITFADENAMNEAI 60
Query: 126 ESLNGVELEGRAMRVSLAQGR 146
+ +NG EL+GR + V+ AQ R
Sbjct: 61 KEMNGKELDGRNITVNQAQSR 81
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
V+ DRETGRSRGF F+T + N I+ ++G+E GR + VN
Sbjct: 33 VISDRETGRSRGFGFITFADENAMNEAIKEMNGKELDGRNITVN 76
>gi|326487468|dbj|BAJ89718.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510625|dbj|BAJ87529.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518508|dbj|BAJ88283.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520529|dbj|BAK07523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527353|dbj|BAK04618.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 161
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 60/82 (73%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ FVG L+W+ +SL AF +YG+V+ ++++ D E+GRSRG+GFV +++ M
Sbjct: 2 ADVEYRCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMR 61
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E++NG +L+GR + V+ AQ
Sbjct: 62 QAIEAMNGQDLDGRNITVNEAQ 83
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT ++ E IE ++G++ GR + VN
Sbjct: 37 IITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVN 80
>gi|114145394|dbj|BAF30986.1| glycine-rich RNA-binding protein [Triticum aestivum]
Length = 163
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 60/82 (73%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ FVG L+W+ +SL AF +YG+V+ ++++ D E+GRSRG+GFV +++ M
Sbjct: 2 ADVEYRCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMR 61
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E++NG +L+GR + V+ AQ
Sbjct: 62 QAIEAMNGQDLDGRNITVNEAQ 83
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT ++ E IE ++G++ GR + VN
Sbjct: 37 IITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVN 80
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 82/144 (56%), Gaps = 6/144 (4%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++K V++D G + +AFV + ++ ++ R L R ++VN++ +P + P
Sbjct: 70 VTKTKVIFD---GANDPYAFVEFLDHSQASQALQTMNKRLLLDREMKVNWAVEPG-QQPS 125
Query: 62 YAET--DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+T F +FVG+LS V + L +AFQ +G+V A+V+ D + +S+GYGFV Y +
Sbjct: 126 KVDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 185
Query: 120 EMETALESLNGVELEGRAMRVSLA 143
E E A+E +NG L R +R + A
Sbjct: 186 EAERAIEQMNGQWLGRRTIRTNWA 209
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 80/159 (50%), Gaps = 24/159 (15%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFS-----DKP 55
+S V+ D T +S+G+ FV+ E+ IE ++G ++LG R +R N++ D+
Sbjct: 159 VSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG-QWLGRRTIRTNWATRKPGDQE 217
Query: 56 KPKL-------PLYAET---DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG 105
KP +Y +T + ++VGN++ +++ + + QAF YG + R+
Sbjct: 218 KPTHYNEKSFDEIYNQTSGDNTSVYVGNIA-NLSEDEIRQAFASYGRISEVRIF------ 270
Query: 106 RSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+ +GY FV + K A+ +N E+ G+ +R S +
Sbjct: 271 KMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQLVRCSWGK 309
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNL SV+ + + F + G+V +V++DG + Y FV + ++ AL+++
Sbjct: 46 LYVGNLDPSVSEDLIATLFNQIGSVTKTKVIFDGAND---PYAFVEFLDHSQASQALQTM 102
Query: 129 NGVELEGRAMRVSLA 143
N L R M+V+ A
Sbjct: 103 NKRLLLDREMKVNWA 117
>gi|443916694|gb|ELU37670.1| subunit of cleavage factor I [Rhizoctonia solani AG-1 IA]
Length = 435
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 87/149 (58%), Gaps = 17/149 (11%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYL--GRILRVNFSDKPKPKL 59
+ T++ D +GRSRGFAF+T NAV+ RE+ G+I+ PK +
Sbjct: 230 VDACTIMRD-ASGRSRGFAFLTFEDPAAVNAVMV----REHFLDGKII------DPKRAI 278
Query: 60 PL--YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
P +A T KLFVG L+ +VT+ES+ F +YG V+ A V+ D +S RS+G+GFV +
Sbjct: 279 PRTEHARTQ-KLFVGGLASTVTSESMRNFFSQYGKVIDANVMVDRDSSRSKGFGFVTFED 337
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQGR 146
+ ++ L+ L +EL+G+ M + LAQ R
Sbjct: 338 QDGVDKLLQ-LGPLELDGKLMDIKLAQPR 365
>gi|169244425|gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|306415963|gb|ADM86856.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|385718874|gb|AFI71864.1| Glycin-rich RNA binding protein [Oryza sativa]
Length = 161
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 59/85 (69%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ +++ FVG L+W+ SL AF YG ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRD 64
Query: 124 ALESLNGVELEGRAMRVSLAQGRRS 148
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 65 AIEGMNGKELDGRNITVNEAQSRRS 89
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT S+ + IE ++G+E GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVN 82
>gi|168033888|ref|XP_001769446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679366|gb|EDQ65815.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 108
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 55/76 (72%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVGNLSW E+L F +YG V+ AR+ + +SGRSRG+GFV S++ E+ A+ES
Sbjct: 25 KLFVGNLSWRCDEEALETLFSDYGRVLEARIATERDSGRSRGFGFVTLSSETEVNAAIES 84
Query: 128 LNGVELEGRAMRVSLA 143
L+G + +GR +RV+LA
Sbjct: 85 LDGADYDGRELRVNLA 100
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-DKPKPK 58
+ +R++GRSRGF FVT+S+ + NA IE+LDG +Y GR LRVN + DKP P+
Sbjct: 55 IATERDSGRSRGFGFVTLSSETEVNAAIESLDGADYDGRELRVNLAGDKPPPR 107
>gi|125537516|gb|EAY84004.1| hypothetical protein OsI_39235 [Oryza sativa Indica Group]
Length = 161
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 59/85 (69%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ +++ FVG L+W+ SL AF YG ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRD 64
Query: 124 ALESLNGVELEGRAMRVSLAQGRRS 148
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 65 AIEGMNGKELDGRNITVNEAQSRRS 89
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT S+ + IE ++G+E GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVN 82
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 57/79 (72%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG +S+ SL +AF +YGNVV AR++ D E+GRSRG+GFV Y++ E +A+++
Sbjct: 41 KLFVGGISFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASSAIQA 100
Query: 128 LNGVELEGRAMRVSLAQGR 146
L+G +L GR +RV+ A R
Sbjct: 101 LDGQDLHGRRVRVNYATER 119
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-DKPK 56
++ DRETGRSRGF FVT ++ E+ ++ I+ LDG++ GR +RVN++ ++P+
Sbjct: 71 IIMDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYATERPQ 121
>gi|406602740|emb|CCH45698.1| Nuclear localization sequence-binding protein [Wickerhamomyces
ciferrii]
Length = 467
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 85/157 (54%), Gaps = 22/157 (14%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPK--------- 56
V+++R TG+SRG+ +V + ++ GRE GR + ++ S KP
Sbjct: 266 VIFERATGKSRGYGYVDFDSKSAAEKALKEYQGREIDGRPINLDMSTGKPHASNNRSNDR 325
Query: 57 -------PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
P P ++T LF+GNLS++ ++L++ F EYG++V R+ ++ + +G
Sbjct: 326 ASKFGDTPSAP--SDT---LFLGNLSFNANRDNLSEVFSEYGSIVSVRIPTHPDTEQPKG 380
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+G+V Y + E + ALE+LNG +EGR +R+ + R
Sbjct: 381 FGYVQYGSVDEAKAALEALNGEYIEGRPVRLDFSAPR 417
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVG LSWS+ E L + F+ G V+ ARV+++ +G+SRGYG+V + +K+ E AL+
Sbjct: 237 LFVGRLSWSIDDEWLKREFEPLGGVISARVIFERATGKSRGYGYVDFDSKSAAEKALKEY 296
Query: 129 NGVELEGRAMRVSLAQGR 146
G E++GR + + ++ G+
Sbjct: 297 QGREIDGRPINLDMSTGK 314
>gi|170098488|ref|XP_001880463.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644901|gb|EDR09150.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 154
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 58/79 (73%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSW+ T ++L QAF E+G V+ + V+ D ++GRSRG+GFV +S+ E + A+
Sbjct: 4 KVYVGNLSWNTTDDTLRQAFSEFGQVLDSIVMRDRDTGRSRGFGFVTFSSGQEADAAIGG 63
Query: 128 LNGVELEGRAMRVSLAQGR 146
LN EL+GR ++V+LA R
Sbjct: 64 LNEQELDGRRIKVNLANAR 82
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V+ DR+TGRSRGF FVT S+ ++ +A I L+ +E GR ++VN ++
Sbjct: 34 VMRDRDTGRSRGFGFVTFSSGQEADAAIGGLNEQELDGRRIKVNLAN 80
>gi|452824419|gb|EME31422.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 148
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 57/81 (70%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D ++FVG L WS++ E L Q F +YG VV ARV+ D E+GRSRG+GF+ Y+ + ++ +
Sbjct: 4 DNRVFVGGLPWSISEEDLKQVFSKYGEVVDARVVIDRETGRSRGFGFISYAESSSVDECI 63
Query: 126 ESLNGVELEGRAMRVSLAQGR 146
+L+G +L+GR +RV+ A R
Sbjct: 64 AALDGQDLQGRTIRVNKAMTR 84
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
V+ DRETGRSRGF F++ + + I LDG++ GR +RVN
Sbjct: 36 VVIDRETGRSRGFGFISYAESSSVDECIAALDGQDLQGRTIRVN 79
>gi|322711864|gb|EFZ03437.1| RNA recognition motif containing protein [Metarhizium anisopliae
ARSEF 23]
Length = 731
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 15/150 (10%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK---------- 56
V+ D++T SRG+ FVT++ +D A LD E+ G+ +R++ ++ K
Sbjct: 74 VVVDQKTKESRGYGFVTLADSDDALAAKTTLDKAEWEGKRIRIDIAEPRKRNAANSEDTV 133
Query: 57 PKLPLYAETD--FKLFVGNLSWSV-TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
PK P E+ KL V NL WS+ T+E L+ F+ YG V + + G+ RG+GFV
Sbjct: 134 PKRPGREESQRPPKLIVRNLPWSIKTSEQLSNLFRSYGKVKFSDLPQS--KGKLRGFGFV 191
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSLA 143
K E ALE +NG E++GR + V A
Sbjct: 192 TIRGKKNAEKALEGVNGKEIDGRTLAVDWA 221
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFV +L +VT ++L F ++ V A V+ D ++ SRGYGFV + + A +L
Sbjct: 45 LFVRSLPANVTNDTLADFFSQHFPVKHAVVVVDQKTKESRGYGFVTLADSDDALAAKTTL 104
Query: 129 NGVELEGRAMRVSLAQGRR 147
+ E EG+ +R+ +A+ R+
Sbjct: 105 DKAEWEGKRIRIDIAEPRK 123
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
+F+ NL ++ T E L F +G V ARV+ D + + G GFVC+ +++ ++ ++
Sbjct: 334 VFIRNLPFTTTDEQLKGFFSHFGAVRYARVVIDKITEKPAGTGFVCFVKQSDAKSCIK 391
>gi|123485827|ref|XP_001324580.1| spliceosomal protein [Trichomonas vaginalis G3]
gi|121907465|gb|EAY12357.1| spliceosomal protein, putative [Trichomonas vaginalis G3]
Length = 221
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 2/134 (1%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKL 69
DR T R G+AFV T +DC + + G + G L+++ + P L + KL
Sbjct: 46 DRITNRMNGYAFVEFRTEQDCMYALSVMQGVKLFGVPLKLSANSTPSTGDEL--DVGAKL 103
Query: 70 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 129
++GNLS V +L Q F+++GNV+ ARV+ D +G+S G+GFV Y + + A +++N
Sbjct: 104 YIGNLSQDVNDGNLLQTFRQFGNVLHARVVVDPATGKSLGHGFVAYDSFDAADKAKKAMN 163
Query: 130 GVELEGRAMRVSLA 143
G G+ + VS A
Sbjct: 164 GEYFGGQPITVSYA 177
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D LF+ ++S VT E LT+ F + G VV + D + R GY FV + T+ + AL
Sbjct: 11 DCTLFLCDISEHVTEEILTELFMQVGPVVFVNIPRDRITNRMNGYAFVEFRTEQDCMYAL 70
Query: 126 ESLNGVELEGRAMRVS 141
+ GV+L G +++S
Sbjct: 71 SVMQGVKLFGVPLKLS 86
>gi|82802755|gb|ABB92428.1| PABP3 [Pongo pygmaeus]
Length = 635
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 19/148 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI---------LRVNFSDKPK 56
E+G+S+GF FV+ ED ++ ++G+E Y+GR L+ F +
Sbjct: 226 ESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQ 285
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL + E L +AF +G + A+V+ +G GRSRG+GFVC+S
Sbjct: 286 DRITRYQVVN--LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEG--GRSRGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG+ + + + VSLA
Sbjct: 342 SPEEATKAVTEMNGIIVATKPLYVSLAH 369
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 14/139 (10%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDG------REYLGRILRVNFSDKPKPKLPLYAET-DF- 67
S+G+ FV T E IE ++G + ++GR F + + + L A+ +F
Sbjct: 137 SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGR-----FKSRKEREAELGAKAKEFP 191
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+++ N + E L F ++G + +V+ D ESG+S+G+GFV + + + A++
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFEKHEDAQKAVDE 250
Query: 128 LNGVELEGRAMRVSLAQGR 146
+NG EL G+ + V AQ +
Sbjct: 251 MNGKELSGKQIYVGRAQKK 269
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS +A+V +D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDLITRRSSNYAYVNFQHPKDAEHALDTMNFDVIKGKPVRIMWS-QHDPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +FV NL S+ ++L +GN++ +V+ D E+G S+GYGFV + T E A
Sbjct: 99 GN--IFVKNLDKSINNKALYDTVSAFGNILSCKVVCD-ENG-SKGYGFVHFETHEAAERA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P P Y L+VG+L VT L + F G ++ RV D + RS Y +V +
Sbjct: 3 PSTPSYPTA--SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E AL+++N ++G+ +R+ +Q
Sbjct: 61 HPKDAEHALDTMNFDVIKGKPVRIMWSQ 88
>gi|410899897|ref|XP_003963433.1| PREDICTED: embryonic polyadenylate-binding protein-like [Takifugu
rubripes]
Length = 606
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP-------KPKLPLYAE 64
E GRSRGF FV + ED ++ ++G+E G+++ V + K K K L +
Sbjct: 226 ERGRSRGFGFVNFAHHEDAQKAVDEMNGKELNGKVIYVGRAQKRLERQGELKRKFELIKQ 285
Query: 65 TDFK------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
+ L+V NL S+ E L + F YG + A+V+ DG +SRG+GFVC+S+
Sbjct: 286 DRIQRYQGVNLYVKNLDDSIDDERLRKEFAPYGTITSAKVMTDGP--QSRGFGFVCFSSP 343
Query: 119 AEMETALESLNGVELEGRAMRVSLAQGR 146
E A+ +NG + + + V+LAQ R
Sbjct: 344 EEATKAVTEMNGRIVATKPLYVALAQRR 371
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---LFVG 72
S+G+ FV T E N IE ++G R + V K + K +++
Sbjct: 137 SKGYGFVHFETEEAANRAIETMNGMLLNDRKVFVGHFKSRKEREEELGSKALKFTNIYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N E L + F +G + RV+ D E GRSRG+GFV ++ + + A++ +NG E
Sbjct: 197 NFGEDYNDEKLKEVFAAFGRTLSVRVMKD-ERGRSRGFGFVNFAHHEDAQKAVDEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
L G+ + V AQ R
Sbjct: 256 LNGKVIYVGRAQKR 269
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A++ D ++ ++ GR +R+ +S + P L
Sbjct: 40 IRVCRDIITRRSLGYAYINFQQPADAECALDTMNYDVIKGRPIRIMWSQR-DPGLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ N+ S+ ++L F +GN++ +V+ D E G S+GYGFV + T+ A
Sbjct: 99 GN--IFIKNMDESIDNKALYDTFSAFGNILSCKVVCD-ERG-SKGYGFVHFETEEAANRA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E++NG+ L R + V + R+
Sbjct: 155 IETMNGMLLNDRKVFVGHFKSRK 177
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P PL + L+VG+L VT L Q F G ++ RV D + RS GY ++ +
Sbjct: 6 PAYPLAS-----LYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
A+ E AL+++N ++GR +R+ +Q
Sbjct: 61 QPADAECALDTMNYDVIKGRPIRIMWSQ 88
>gi|30692256|ref|NP_849524.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661646|gb|AEE87046.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 92
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 59/86 (68%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
+E +++ FVG L+W+ E L + F ++G+V+ ++++ D ESGRSRG+GFV + + M
Sbjct: 2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61
Query: 123 TALESLNGVELEGRAMRVSLAQGRRS 148
A+E +NG EL+GR + V+ AQ R S
Sbjct: 62 DAIEEMNGKELDGRVITVNEAQSRGS 87
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRE+GRSRGF FVT + IE ++G+E GR++ VN
Sbjct: 37 IINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVN 80
>gi|209976406|gb|ACJ04160.1| putative glycine-rich RNA-binding protein [Chorispora bungeana]
Length = 175
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 59/82 (71%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +F+ FVG L+W+ +L AF +YG+VV ++++ D E+GRSRG+GFV + + M+
Sbjct: 4 ADVEFRCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEKSMK 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG +L+GR++ V+ AQ
Sbjct: 64 DAIEGMNGQDLDGRSITVNEAQ 85
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + IE ++G++ GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVN 82
>gi|198422109|ref|XP_002123332.1| PREDICTED: similar to poly A binding protein, cytoplasmic 1 b,
partial [Ciona intestinalis]
Length = 500
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 26/169 (15%)
Query: 1 MLSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGRE-----------YLGRI--- 46
++ + V+ DR+ G SRGF FV + E+ A +E ++G+E Y+GR
Sbjct: 59 VVKSVAVMRDRD-GNSRGFGFVAYDSHEEAQAAVEAMNGQEIEGASGSTDILYVGRAQKK 117
Query: 47 ------LRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLY 100
LR + + + ++ + + L+V NL +VT + L +AF YG + A+++
Sbjct: 118 QERQQELRGQYEQQKQERIQRFQGVN--LYVKNLDDNVTDDELREAFATYGTITSAKIMS 175
Query: 101 DGESG---RSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
DGE RSRG+GFVC+S+ E A+ +NG + + + V+LAQ R
Sbjct: 176 DGECSTGERSRGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRR 224
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+++ N ++L F++YG V V+ D G SRG+GFV Y + E + A+E++
Sbjct: 36 VYIKNFGDKYDEKTLQVMFEKYGVVKSVAVMRD-RDGNSRGFGFVAYDSHEEAQAAVEAM 94
Query: 129 NGVELEG 135
NG E+EG
Sbjct: 95 NGQEIEG 101
>gi|18103931|emb|CAC83314.1| glycine rich RNA binding protein [Oryza sativa Indica Group]
Length = 194
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 59/85 (69%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ +++ FVG L+W+ SL AF YG ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRD 64
Query: 124 ALESLNGVELEGRAMRVSLAQGRRS 148
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 65 AIEGMNGKELDGRNITVNEAQSRRS 89
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT S+ + IE ++G+E GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVN 82
>gi|189203851|ref|XP_001938261.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985360|gb|EDU50848.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 475
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 11/151 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-DKPKPKLPLYAET 65
V+ DRETGR++GF +V + D + + E GR L V+FS + KP A
Sbjct: 252 VITDRETGRAKGFGYVEFANAADAAKAQKEMHEYELDGRQLNVDFSTPRAKPDANGGARA 311
Query: 66 D----------FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
+ LF+GN+S+ + ES+ + F EYG++ + D ++G +G+G+V +
Sbjct: 312 NKYGDKRSPPSNTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDF 371
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQGR 146
S++ E ALE+LNG ++ GRA+R+ A R
Sbjct: 372 SSQQEATAALEALNGQDIGGRAIRIDYATPR 402
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 57/93 (61%)
Query: 54 KPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
K K + P E LFVGN+SW++ + L + F+ +G +VG RV+ D E+GR++G+G+V
Sbjct: 208 KSKVEEPAAEEGVKNLFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYV 267
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
++ A+ A + ++ EL+GR + V + R
Sbjct: 268 EFANAADAAKAQKEMHEYELDGRQLNVDFSTPR 300
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 36/51 (70%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
++++++ DR+TG +GF +V S+ ++ A +E L+G++ GR +R++++
Sbjct: 349 ITRVSLPTDRDTGALKGFGYVDFSSQQEATAALEALNGQDIGGRAIRIDYA 399
>gi|400595086|gb|EJP62896.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 468
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/128 (35%), Positives = 71/128 (55%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV + ++ L+GR +RVN++ + F +FVG+LS V
Sbjct: 110 YGFVEYDDPGAADRAMQTLNGRRVHQSEIRVNWAYQANSSGKEDTSGHFHIFVGDLSNEV 169
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
+ LTQAF +G+V ARV++D ++GRSRGYGFV + + E E AL S++G L RA+
Sbjct: 170 NDDILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAI 229
Query: 139 RVSLAQGR 146
R + A +
Sbjct: 230 RCNWANQK 237
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSDKP----- 55
+S+ V++D +TGRSRG+ FV + + ++DG E+LG R +R N++++
Sbjct: 184 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDG-EWLGSRAIRCNWANQKGQPSM 242
Query: 56 -----------KPKLP----------------LYAET---DFKLFVGNLSWSVTTESLTQ 85
P P + A+T ++VGNL+ T +
Sbjct: 243 AQQQAMQAMGLTPTTPFGHHQFPTHGVGSYDVILAQTPNWQTTVYVGNLTPYTTPNDVVP 302
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ T A+ +NG + GR ++ S +
Sbjct: 303 LFQNFGFVVESRFQAD------RGFAFIKMDTHENASMAICQMNGYNVNGRPLKCSWGKD 356
Query: 146 R 146
+
Sbjct: 357 K 357
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y + A+++L
Sbjct: 70 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGFNYGFVEYDDPGAADRAMQTL 128
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 129 NGRRVHQSEIRVNWA 143
>gi|425781927|gb|EKV19861.1| hypothetical protein PDIG_00280 [Penicillium digitatum PHI26]
gi|425784024|gb|EKV21834.1| hypothetical protein PDIP_02540 [Penicillium digitatum Pd1]
Length = 98
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSW + ESL AF E+GN+V + V+ D E+GRSRG+GFV +S+ E E A+ +
Sbjct: 3 KIYVGNLSWHTSDESLRAAFGEFGNIVDSIVMVDRETGRSRGFGFVTFSSAEEAEAAINA 62
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
LN +L+GR +RV+LA R S
Sbjct: 63 LNEQDLDGRRIRVNLANARPS 83
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V+ DRETGRSRGF FVT S+ E+ A I L+ ++ GR +RVN ++
Sbjct: 33 VMVDRETGRSRGFGFVTFSSAEEAEAAINALNEQDLDGRRIRVNLAN 79
>gi|6911142|gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Catharanthus roseus]
Length = 137
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 60/82 (73%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +F+ FVG L+W+ T +SL++AF +YG V+ ++++ D E+GRSRG+GFV + + M+
Sbjct: 4 ADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMK 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQTLDGRNVTVNEAQ 85
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + IE ++G+ GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNVTVN 82
>gi|311698159|gb|ADQ00374.1| glycine-rich RNA-binding protein [Sequoia sempervirens]
Length = 194
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 58/84 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AE +F+ FVG L+W+ SL AF +G V+ ++++ D E+GRSRG+GFV +S + M
Sbjct: 4 AEIEFRCFVGGLAWATDDRSLHDAFSPFGEVLESKIVSDRETGRSRGFGFVTFSDEQAMM 63
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+E++NG EL+GR + V+ AQ R
Sbjct: 64 DAIEAMNGKELDGRNITVNQAQSR 87
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT S + IE ++G+E GR + VN
Sbjct: 39 IVSDRETGRSRGFGFVTFSDEQAMMDAIEAMNGKELDGRNITVN 82
>gi|10799202|gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 170
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 59/82 (71%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ FVG L+W+ E+L AF +G V+ ++V+ D E+GRSRG+GFV +S++ M
Sbjct: 4 ADVEYRCFVGGLAWATNNETLEHAFANFGQVLDSKVITDRETGRSRGFGFVTFSSEQSML 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E++NG EL+GR + V+ AQ
Sbjct: 64 DAIENMNGKELDGRNITVNQAQ 85
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
V+ DRETGRSRGF FVT S+ + IEN++G+E GR + VN
Sbjct: 39 VITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVN 82
>gi|403419677|emb|CCM06377.1| predicted protein [Fibroporia radiculosa]
Length = 582
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 85/159 (53%), Gaps = 25/159 (15%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN---------------- 50
V DR TG+SRGFA+VT +T E A ++ G+E GR + ++
Sbjct: 345 VQMDRNTGKSRGFAYVTFATAEAAQAALQLT-GKEIDGRPVNIDMTTERDPNAARQNRAA 403
Query: 51 -FSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
+ DKP +E LFVGNLS+S T + L + F EYG+V RV D E+G +G
Sbjct: 404 AYGDKP-------SEPSAVLFVGNLSFSATEDLLWETFSEYGDVKSVRVPTDRETGSPKG 456
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+ +V +S ++A E ++G E+ GRA+R+ +Q R S
Sbjct: 457 FAYVEFSDVETAKSAYEGVSGKEIAGRAVRLDYSQPRDS 495
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG LSW+V E L Q F + G VV ARV D +G+SRG+ +V ++T A L
Sbjct: 316 IFVGRLSWNVDNEWLAQEFADCGEVVSARVQMDRNTGKSRGFAYVTFATAE-AAQAALQL 374
Query: 129 NGVELEGRAMRVSLAQGR 146
G E++GR + + + R
Sbjct: 375 TGKEIDGRPVNIDMTTER 392
>gi|297733872|emb|CBI15119.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 9/113 (7%)
Query: 43 LGRILRVNFSDK---------PKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 93
+G ILR S + P + + KLF+G LS+S SL +AF +YG V
Sbjct: 7 VGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAFHKYGEV 66
Query: 94 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ ARV+ D E+GRSRG+GFV +++ E +A+++L+G +L GR +RV+ A R
Sbjct: 67 IEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDR 119
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
V+ DRETGRSRGF FVT ++ E+ ++ I+ LDG++ GR +RVN++
Sbjct: 71 VIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYA 116
>gi|20152613|emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius]
Length = 168
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 60/84 (71%)
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ AE +++ FVG L+W+ +SL +AF YG V+ ++++ D E+GRSRG+GFV +S++
Sbjct: 1 MDAEVEYRCFVGGLAWATDDQSLERAFSNYGQVLESKIINDRETGRSRGFGFVTFSSEQA 60
Query: 121 METALESLNGVELEGRAMRVSLAQ 144
M A+E +NG +L+GR + V+ AQ
Sbjct: 61 MRDAIEGMNGQDLDGRNITVNEAQ 84
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT S+ + IE ++G++ GR + VN
Sbjct: 38 IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGQDLDGRNITVN 81
>gi|1009363|dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris]
Length = 144
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LSW +SL AF +G+VV ARV+ D +SGRSRG+GFV +S A+++
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKA 98
Query: 128 LNGVELEGRAMRVSLAQGR 146
++G EL+GR +RV +AQ R
Sbjct: 99 MDGQELQGRNIRVRIAQER 117
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+ DR++GRSRGF FV S E N I+ +DG+E GR +RV + + P+
Sbjct: 69 VIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVRIAQERAPR 120
>gi|336469273|gb|EGO57435.1| hypothetical protein NEUTE1DRAFT_129383 [Neurospora tetrasperma
FGSC 2508]
Length = 494
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/137 (33%), Positives = 73/137 (53%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKL 69
D + + + FV ++ L+GR +RVN++ + + F +
Sbjct: 138 DEKQQKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNQNKEDTSGHFHI 197
Query: 70 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 129
FVG+LS V E L QAF +G+V ARV++D ++GRSRGYGFV + + + E AL S++
Sbjct: 198 FVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMD 257
Query: 130 GVELEGRAMRVSLAQGR 146
G L RA+R + A +
Sbjct: 258 GEWLGSRAIRCNWANQK 274
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 221 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 279
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 280 AQQQAMQQMGLTPTTPYGHHHFPTHGVHSYDMIVAQTPAWQTTCYVGNLTPYTTQNDLVP 339
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ T A+ LNG ++ GR ++ S +
Sbjct: 340 LFQNFGYVVESRFQAD------RGFAFIKMDTHENAAMAICQLNGYQVNGRPLKCSWGKD 393
Query: 146 R 146
+
Sbjct: 394 K 394
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG-------------RSRGYGFVCY 115
L+VG L VT + L Q F+ G+V +++ D G + YGFV Y
Sbjct: 93 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGKPGSEQPRDEKQQKGYNYGFVEY 152
Query: 116 STKAEMETALESLNGVELEGRAMRVSLA 143
E A+++LNG + +RV+ A
Sbjct: 153 DDPGAAERAMQTLNGRRVHQSEIRVNWA 180
>gi|393217699|gb|EJD03188.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 142
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 57/79 (72%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSW+ T ++L +AF +YG VV + V+ D ++GRSRG+GFV +S++ E A+ +
Sbjct: 4 KVYVGNLSWNTTDDTLRKAFSDYGQVVDSIVMRDRDTGRSRGFGFVTFSSETEATGAISA 63
Query: 128 LNGVELEGRAMRVSLAQGR 146
LN E EGR ++V+ A R
Sbjct: 64 LNEQEFEGRRIKVNFANAR 82
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPKP 57
V+ DR+TGRSRGF FVT S+ + I L+ +E+ GR ++VNF++ +P+P
Sbjct: 34 VMRDRDTGRSRGFGFVTFSSETEATGAISALNEQEFEGRRIKVNFANARPQP 85
>gi|356517068|ref|XP_003527212.1| PREDICTED: uncharacterized protein LOC100777821 [Glycine max]
Length = 182
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 59/82 (71%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AE +F+ FVG L+W+ ++L +AF ++G +V ++V+ D E+GRSRG+GFV ++T+ M
Sbjct: 4 AEVEFRCFVGGLAWATDHDALEKAFSQFGEIVESKVINDRETGRSRGFGFVTFATEQAMR 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
V+ DRETGRSRGF FVT +T + IE ++G+ GR + VN
Sbjct: 39 VINDRETGRSRGFGFVTFATEQAMRDAIEGMNGQNLDGRNITVN 82
>gi|315046452|ref|XP_003172601.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
gi|311342987|gb|EFR02190.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
Length = 481
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 83/150 (55%), Gaps = 17/150 (11%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK-------PKPKL 59
++ DRE+GRSRGF +V + VED E GR L ++F++ P+ +
Sbjct: 269 IVTDRESGRSRGFGYVEFANVEDAVKAHAAKKDVELDGRKLNLDFANARANGNANPRERA 328
Query: 60 PLYA---------ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 110
A E+D LF+GN+S+S + + F +YG++ G R+ D ESGR +G+
Sbjct: 329 DNRAKSFGDQTSPESDT-LFIGNISFSADESMVQELFSKYGSIQGIRLPTDPESGRPKGF 387
Query: 111 GFVCYSTKAEMETALESLNGVELEGRAMRV 140
G+V +S+ E A+E+ +G +L GR++R+
Sbjct: 388 GYVQFSSVDEARAAMEAEHGADLGGRSIRL 417
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LF GNLSW+V E L F+E+G +VG R++ D ESGRSRG+G+V ++ + A +
Sbjct: 240 LFAGNLSWNVDEEWLRSEFEEFGELVGTRIVTDRESGRSRGFGYVEFANVEDAVKAHAAK 299
Query: 129 NGVELEGRAMRVSL 142
VEL+GR + +
Sbjct: 300 KDVELDGRKLNLDF 313
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
D E+GR +GF +V S+V++ A +E G + GR +R+++S PK P
Sbjct: 378 DPESGRPKGFGYVQFSSVDEARAAMEAEHGADLGGRSIRLDYS---TPKQP 425
>gi|76160980|gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
gi|76160996|gb|ABA40461.1| RNA binding protein-like protein [Solanum tuberosum]
Length = 150
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 57/79 (72%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+LFVG LSW +SL +AF +G+VV A+V+ D +SGRSRG+GFV +S + + A+ +
Sbjct: 40 RLFVGGLSWGTDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEAMNA 99
Query: 128 LNGVELEGRAMRVSLAQGR 146
++G +L GR +RV+LAQ R
Sbjct: 100 MDGQQLHGRNIRVNLAQER 118
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDC-NAVIENLDGREYLGRILRVNFSDKPKPK 58
V+ DR++GRSRGF FV S EDC + +DG++ GR +RVN + + P+
Sbjct: 70 VIIDRDSGRSRGFGFVNFSD-EDCAKEAMNAMDGQQLHGRNIRVNLAQERAPR 121
>gi|126133234|ref|XP_001383142.1| hypothetical protein PICST_55837 [Scheffersomyces stipitis CBS
6054]
gi|126094967|gb|ABN65113.1| polyadenylated RNA-binding protein, partial [Scheffersomyces
stipitis CBS 6054]
Length = 453
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 2/131 (1%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVN--FSDKPKPKLPLYAETDFKLFVGNLSW 76
+AF+ T + + + L+GR +++N F E F +FVG+LS
Sbjct: 121 YAFIEFDTNQAADMALHTLNGRIINNSEIKINWAFQSSTINTAAHPDEPTFNIFVGDLSP 180
Query: 77 SVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGR 136
V E+LT+AF ++ + A V++D ++ RSRGYGFV + T+A+ E AL+++NG + GR
Sbjct: 181 EVDDETLTRAFSKFQTLKQAHVMWDMQTSRSRGYGFVTFGTQADAELALQTMNGEWINGR 240
Query: 137 AMRVSLAQGRR 147
A+R + A ++
Sbjct: 241 AIRCNWASHKQ 251
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
L + V++D +T RSRG+ FVT T D ++ ++G GR +R N++
Sbjct: 197 LKQAHVMWDMQTSRSRGYGFVTFGTQADAELALQTMNGEWINGRAIRCNWA 247
Score = 35.4 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L SVT + L F G + ++L D ++ Y F+ + T + AL +L
Sbjct: 81 LYVGGLHKSVTDDMLKDLFSVAGGIKSVKILND-KNKPGFNYAFIEFDTNQAADMALHTL 139
Query: 129 NGVELEGRAMRVSLA 143
NG + ++++ A
Sbjct: 140 NGRIINNSEIKINWA 154
>gi|259488599|tpe|CBF88164.1| TPA: nuclear and cytoplasmic polyadenylated RNA-binding protein
pub1 (AFU_orthologue; AFUA_1G12000) [Aspergillus
nidulans FGSC A4]
Length = 477
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/128 (35%), Positives = 70/128 (54%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV ++ L+GR +RVN++ + F +FVG+LS V
Sbjct: 134 YGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQSNTANKEDTSNHFHIFVGDLSNEV 193
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
E L QAF +G+V ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+
Sbjct: 194 NDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAI 253
Query: 139 RVSLAQGR 146
R + A +
Sbjct: 254 RCNWANQK 261
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALTSMDG-EWLGSRAIRCNWANQKGQPSI 266
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T +
Sbjct: 267 SQQQAMAAMGMTPTTPFGHHHFPTHGIQSYDMVVQQTPAWQTTCYVGNLTPYTTQNDIVP 326
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G V+ R+ D RG+ F+ T +A+ LNG + GR ++ S +
Sbjct: 327 LFQNFGYVIETRMQAD------RGFAFIKMDTHENAASAICQLNGYNVNGRPLKCSWGKD 380
Query: 146 R 146
R
Sbjct: 381 R 381
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE-SGRSRGYGFVCYSTKAEMETALES 127
L+VG L VT + L Q F+ G+V+ +++ D + + YGFV + E A+++
Sbjct: 92 LYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNFNSKGANYGFVEFDDPGAAERAMQT 151
Query: 128 LNGVELEGRAMRVSLA 143
LNG + +RV+ A
Sbjct: 152 LNGRRIHQSEIRVNWA 167
>gi|171687054|ref|XP_001908468.1| hypothetical protein [Podospora anserina S mat+]
gi|170943488|emb|CAP69141.1| unnamed protein product [Podospora anserina S mat+]
Length = 481
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/135 (34%), Positives = 71/135 (52%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+ + + FV ++ L+GR +RVN++ + F +FV
Sbjct: 123 KNAKGYNYGFVEYDDPGSAERAMQTLNGRRVHQAEIRVNWAYQSNNTNKEDTSNHFHIFV 182
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS V E L QAF +G+V ARV++D ++GRSRGYGFV + + E E AL S++G
Sbjct: 183 GDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGE 242
Query: 132 ELEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 243 WLGSRAIRCNWANQK 257
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 43/183 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV + + ++DG E+LG R +R N+++ K +P +
Sbjct: 204 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 262
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 263 AQQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMIVNQTPAWQTTCYVGNLTPYTTQNDLVP 322
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ T A+ LNG + GR ++ S Q
Sbjct: 323 LFQNFGFVVESRFQAD------RGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSTPQA 376
Query: 146 RRS 148
+++
Sbjct: 377 QQA 379
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+++L
Sbjct: 90 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGYNYGFVEYDDPGSAERAMQTL 148
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 149 NGRRVHQAEIRVNWA 163
>gi|358342556|dbj|GAA49996.1| RNA-binding protein 39 [Clonorchis sinensis]
Length = 730
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/144 (32%), Positives = 79/144 (54%), Gaps = 10/144 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK------PKLP 60
++ D +T RS+G A+V VE + L G LG +++ S K P +P
Sbjct: 110 LIMDNKTKRSKGIAYVEFREVESAQLAL-GLTGTRLLGVPIQIQQSHAEKNRMNAIPSVP 168
Query: 61 LYAETD---FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
+ + KL++G+L +++T E L F+ +G + +++ D +GRS+GYGFV Y+
Sbjct: 169 KPTQQNRGPMKLYIGSLHYNITEEMLKGIFEPFGKIDDIKLIKDPATGRSQGYGFVTYAN 228
Query: 118 KAEMETALESLNGVELEGRAMRVS 141
+ + AL+ LNG EL GR M+V+
Sbjct: 229 SDDAKKALDQLNGFELAGRPMKVN 252
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
+ + ++ D TGRS+G+ FVT + +D ++ L+G E GR ++VN
Sbjct: 204 IDDIKLIKDPATGRSQGYGFVTYANSDDAKKALDQLNGFELAGRPMKVN 252
>gi|449302198|gb|EMC98207.1| hypothetical protein BAUCODRAFT_416441 [Baudoinia compniacensis
UAMH 10762]
Length = 479
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 15 RSRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVG 72
+S+G+ FV + ++ L+GR + +RVN++ + F +FVG
Sbjct: 120 QSKGYNYGFVEYDDPQCAERAMQTLNGRRVHQQEIRVNWAYQSNTISKEDTSNHFHIFVG 179
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
+LS V E L QAF +G V ARV++D ++GRSRGYGFV + + + E AL S++G
Sbjct: 180 DLSNEVNDEVLLQAFSAFGTVSEARVMWDMKTGRSRGYGFVSFRDRGDAEKALSSMDGEW 239
Query: 133 LEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 240 LGSRAIRCNWANQK 253
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPK- 58
+S+ V++D +TGRSRG+ FV+ D + ++DG E+LG R +R N+++ K +P
Sbjct: 200 VSEARVMWDMKTGRSRGYGFVSFRDRGDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSY 258
Query: 59 ---------------------LPLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P F++ +VGNL+ T L
Sbjct: 259 SQAQAMVQMGMTPTTPYGHHTFPTQGAQSFEMIVQQTPQWQTTCYVGNLTPYTTQNDLVP 318
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G V R D RG+ FV T A+ L+G + GR ++ S +
Sbjct: 319 LFQNFGYVTETRFHSD------RGFAFVKMDTHENAANAICQLSGYNVNGRPLKCSWGKD 372
Query: 146 R 146
R
Sbjct: 373 R 373
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 126
L+VG L VT + L Q F+ G+V +++ D ++ +S+G YGFV Y E A++
Sbjct: 84 LYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPD-KNFQSKGYNYGFVEYDDPQCAERAMQ 142
Query: 127 SLNGVELEGRAMRVSLA 143
+LNG + + +RV+ A
Sbjct: 143 TLNGRRVHQQEIRVNWA 159
>gi|296805886|ref|XP_002843767.1| ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238845069|gb|EEQ34731.1| ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 471
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 51/157 (32%), Positives = 86/157 (54%), Gaps = 17/157 (10%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-------KPKPKL 59
++ DRE+GRSRGF +V + VED E GR L ++F++ P+ +
Sbjct: 264 IVTDRESGRSRGFGYVEFANVEDAVKAHAAKKDAELDGRKLNLDFANARTNAGGNPRERA 323
Query: 60 PLYA---------ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 110
A E+D LF+GNL +S ++ + F ++G+++G R+ D +SGR +G+
Sbjct: 324 DSRAKSFGDQTSPESD-TLFLGNLPFSADENAVQELFSKHGSILGIRLPTDPDSGRPKGF 382
Query: 111 GFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRR 147
G+V +S+ E ALE+ G +L GRA+R+ + R+
Sbjct: 383 GYVQFSSVDEARAALEAEYGADLGGRAIRIDFSTPRQ 419
Score = 72.4 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 52 SDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
+ K K LP A + LF GNLSW+V E L F+E+G +VGAR++ D ESGRSRG+G
Sbjct: 220 AKKAKVNLPDGASAN--LFAGNLSWNVDEEWLRSEFEEFGELVGARIVTDRESGRSRGFG 277
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+V ++ + A + EL+GR + + A R
Sbjct: 278 YVEFANVEDAVKAHAAKKDAELDGRKLNLDFANAR 312
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP 57
D ++GR +GF +V S+V++ A +E G + GR +R++FS +P
Sbjct: 373 DPDSGRPKGFGYVQFSSVDEARAALEAEYGADLGGRAIRIDFSTPRQP 420
>gi|170091988|ref|XP_001877216.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648709|gb|EDR12952.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 218
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 87/158 (55%), Gaps = 14/158 (8%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+ TV DR TG+SRGF +V +T + ++ ++G+E GR ++V+ S P+ K +
Sbjct: 25 IESATVQMDRNTGKSRGFGYVHFTTPDAVEKALQ-MNGQEIDGRAIKVDRS-LPRDKSQV 82
Query: 62 -----------YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 110
+ LFVGNLS+ VT +++ F +YG V R+ D E+GR +G+
Sbjct: 83 REKRAQAFGDEVSAPSSTLFVGNLSFGVTEDTVWSFFNDYG-VKSVRLPTDRETGRPKGF 141
Query: 111 GFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
G+V + + A E+ NG E+EGR++R+ +Q R S
Sbjct: 142 GYVEFEDIDGAKKAFEAANGSEIEGRSIRLDYSQPRDS 179
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG LSW+V + L Q F + G + A V D +G+SRG+G+V ++T +E AL+ +
Sbjct: 1 VFVGQLSWAVDNDRLAQEFADCGEIESATVQMDRNTGKSRGFGYVHFTTPDAVEKALQ-M 59
Query: 129 NGVELEGRAMRV 140
NG E++GRA++V
Sbjct: 60 NGQEIDGRAIKV 71
>gi|187373099|gb|ACD03270.1| glycine-rich RNA-binding protein [Nicotiana tabacum]
Length = 157
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 58/82 (70%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AE +++ FVG L+W+ T ++L AF +YG +V ++++ D E+GRSRG+GFV + + M
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGDAFSQYGEIVDSKIINDRETGRSRGFGFVTFKDEQAMR 61
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG +L+GR + V+ AQ
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQ 83
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + IE ++G++ GR + VN
Sbjct: 37 IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVN 80
>gi|398407815|ref|XP_003855373.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
gi|339475257|gb|EGP90349.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
Length = 401
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
Query: 15 RSRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVG 72
+S+GF FV ++ L+GR + +RVN++ + F +FVG
Sbjct: 107 QSKGFNYGFVEYDDPGAAERAMQTLNGRRVHQQEIRVNWAYQSNTTSKEDTSNHFHIFVG 166
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
+LS V E L QAF +G V ARV++D ++GRSRGYGFV + +A+ E AL S++G
Sbjct: 167 DLSNEVNDEVLLQAFSAFGTVSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEW 226
Query: 133 LEGRAMRVSLA 143
L RA+R + A
Sbjct: 227 LGSRAIRCNWA 237
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 44/182 (24%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD---KPK- 56
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ +P
Sbjct: 187 VSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDG-EWLGSRAIRCNWANQKGQPSF 245
Query: 57 ------------PKLPLYAETDFK--------------------LFVGNLSWSVTTESLT 84
P P F +VGNL+ T L
Sbjct: 246 SQQQAMVQMGMTPTTPYGGHHSFPTQGAQSYEMIVQQTPQWQTTCYVGNLTPYTTQNDLV 305
Query: 85 QAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
FQ +G V R D RG+ F+ T A+ L+G ++ GR ++ S +
Sbjct: 306 PLFQNFGYVTETRFQSD------RGFAFIKMDTHENAANAICQLSGYQVNGRPLKCSWGK 359
Query: 145 GR 146
R
Sbjct: 360 DR 361
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 126
L+VG L VT + L Q F+ G+V +++ D ++ +S+G YGFV Y E A++
Sbjct: 71 LYVGGLDPRVTEDVLKQIFETTGHVQNVKIIPD-KNFQSKGFNYGFVEYDDPGAAERAMQ 129
Query: 127 SLNGVELEGRAMRVSLA 143
+LNG + + +RV+ A
Sbjct: 130 TLNGRRVHQQEIRVNWA 146
>gi|350291093|gb|EGZ72307.1| hypothetical protein NEUTE2DRAFT_144798 [Neurospora tetrasperma
FGSC 2509]
Length = 490
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
Query: 12 ETGRSRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKL 69
E R +G+ FV ++ L+GR +RVN++ + + F +
Sbjct: 134 EQPRQKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNQNKEDTSGHFHI 193
Query: 70 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 129
FVG+LS V E L QAF +G+V ARV++D ++GRSRGYGFV + + + E AL S++
Sbjct: 194 FVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMD 253
Query: 130 GVELEGRAMRVSLAQGR 146
G L RA+R + A +
Sbjct: 254 GEWLGSRAIRCNWANQK 270
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 217 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 275
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 276 AQQQAMQQMGLTPTTPYGHHHFPTHGVHSYDMIVAQTPAWQTTCYVGNLTPYTTQNDLVP 335
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ T A+ LNG ++ GR ++ S +
Sbjct: 336 LFQNFGYVVESRFQAD------RGFAFIKMDTHENAAMAICQLNGYQVNGRPLKCSWGKD 389
Query: 146 R 146
+
Sbjct: 390 K 390
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD-------GESGRSRG--YGFVCYSTKA 119
L+VG L VT + L Q F+ G+V +++ D E R +G YGFV Y
Sbjct: 93 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGKPGSEQPRQKGYNYGFVEYDDPG 152
Query: 120 EMETALESLNGVELEGRAMRVSLA 143
E A+++LNG + +RV+ A
Sbjct: 153 AAERAMQTLNGRRVHQSEIRVNWA 176
>gi|403213707|emb|CCK68209.1| hypothetical protein KNAG_0A05440 [Kazachstania naganishii CBS
8797]
Length = 442
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 86/142 (60%), Gaps = 3/142 (2%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V+ D+++ +AFV + D + ++ L+G + +++N + + + +
Sbjct: 108 VKVMIDKKSNYV-NYAFVEYAKAHDASVALQTLNGIQIENNKVKINRAFQSQQST--TDD 164
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ F LFVG+L+ + ++L+++F+++ + + A V++D ++GRSRGYGFV ++ + + + A
Sbjct: 165 STFNLFVGDLNIDIDDDTLSRSFKDFPSYIQAHVMWDMQTGRSRGYGFVSFADQEQAQKA 224
Query: 125 LESLNGVELEGRAMRVSLAQGR 146
+E + G EL GR +R++ A R
Sbjct: 225 MEEMQGKELNGRPIRINWATKR 246
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 52 SDKPKPKLPLYAE------TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG 105
++K P +P A +D L+VGNL S+T + L Q FQ G +V +V+ D +S
Sbjct: 58 ANKEPPVVPANATHGGRETSDRVLYVGNLDKSITEDILKQYFQVAGQIVDVKVMIDKKSN 117
Query: 106 RSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
Y FV Y+ + AL++LNG+++E ++++ A
Sbjct: 118 YV-NYAFVEYAKAHDASVALQTLNGIQIENNKVKINRA 154
>gi|246771225|gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
Length = 143
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
Query: 43 LGRILRVNFSDKPKPKLPLYAE----TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARV 98
+G ++R S P + + +LFVG LSW +SL AF +G V A+V
Sbjct: 7 IGSLIRQTVSQNSAPIDSMLNSIRCMSSSRLFVGGLSWGTDDQSLKDAFSSFGEVTDAKV 66
Query: 99 LYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+ D E+GRSRG+GFV + +AL S++GVEL GR++RVS AQ
Sbjct: 67 ITDRETGRSRGFGFVNFVDNEAAGSALSSMDGVELNGRSIRVSFAQ 112
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
V+ DRETGRSRGF FV E + + ++DG E GR +RV+F+ +
Sbjct: 66 VITDRETGRSRGFGFVNFVDNEAAGSALSSMDGVELNGRSIRVSFAQE 113
>gi|115491713|ref|XP_001210484.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
gi|114197344|gb|EAU39044.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
Length = 478
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 2/144 (1%)
Query: 5 LTVLYDRETGRSRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLY 62
+ ++ D+ S+G+ FV ++ L+GR +RVN++ +
Sbjct: 120 VKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQSNNTNKED 179
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
F +FVG+LS V E L QAF +G+V ARV++D ++GRSRGYGFV + +++ E
Sbjct: 180 TSNHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDAE 239
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
AL S++G L RA+R + A +
Sbjct: 240 KALSSMDGEWLGSRAIRCNWANQK 263
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 210 VSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 268
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ + L
Sbjct: 269 SQQQAMAAMGMTPTTPFGHHHFPTHGMQSYDMVVQQTPQWQTTCYVGNLTPYTSQNDLVP 328
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G V+ R+ D RG+ F+ + A+ LNG + GR ++ S +
Sbjct: 329 LFQNFGFVLETRLQAD------RGFAFIKMDSHENAAMAICQLNGYNVNGRPLKCSWGKD 382
Query: 146 R 146
R
Sbjct: 383 R 383
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 126
L+VG L VT + L Q F+ G+VV +++ D S+G YGFV + E A++
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQ 152
Query: 127 SLNGVELEGRAMRVSLA 143
+LNG + +RV+ A
Sbjct: 153 TLNGRRIHQSEIRVNWA 169
>gi|169768824|ref|XP_001818882.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus oryzae RIB40]
gi|238498168|ref|XP_002380319.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|83766740|dbj|BAE56880.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693593|gb|EED49938.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|391874569|gb|EIT83434.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 477
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 2/144 (1%)
Query: 5 LTVLYDRETGRSRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLY 62
+ ++ D+ S+G+ FV ++ L+GR +RVN++ +
Sbjct: 119 VKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQSNSTNKED 178
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
F +FVG+LS V E L QAF +G+V ARV++D ++GRSRGYGFV + +A+ +
Sbjct: 179 TSNHFHIFVGDLSNEVNDEILQQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRADAD 238
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
AL S++G L RA+R + A +
Sbjct: 239 KALGSMDGEWLGSRAIRCNWANQK 262
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + + ++DG E+LG R +R N+++ K +P +
Sbjct: 209 VSEARVMWDMKTGRSRGYGFVAFRDRADADKALGSMDG-EWLGSRAIRCNWANQKGQPSI 267
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 268 SQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVP 327
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G V+ R+ D RG+ F+ + A+ LNG + GR ++ S +
Sbjct: 328 LFQNFGYVLETRLQAD------RGFAFIKMDSHENAAMAICQLNGYNVNGRPLKCSWGKD 381
Query: 146 R 146
R
Sbjct: 382 R 382
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 126
L+VG L VT + L Q F+ G+VV +++ D S+G YGFV + E A++
Sbjct: 92 LYVGGLDQRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQ 151
Query: 127 SLNGVELEGRAMRVSLA 143
+LNG + +RV+ A
Sbjct: 152 TLNGRRIHQSEIRVNWA 168
>gi|393235474|gb|EJD43029.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 351
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 83/144 (57%), Gaps = 15/144 (10%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYL-GRILRVNFSDKPKPKLPL--Y 62
T++ D +TGRSRGFAF+T NAV+ YL G+I+ PK +P +
Sbjct: 29 TIMRD-QTGRSRGFAFLTFEDPAAVNAVMVR---EHYLDGKII------DPKRAIPRQEH 78
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
T KLFVG L+ +VTTESL F ++G VV A V+ D +S RS+G+GFV + +E
Sbjct: 79 HRTQ-KLFVGGLAPTVTTESLRAYFAQFGKVVDATVMVDRDSSRSKGFGFVTFEDIDNIE 137
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
L L +E++G+ + V LAQ R
Sbjct: 138 RLL-GLGHLEIDGKMIDVKLAQPR 160
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+FVG L+W + E L F ++G V ++ D ++GRSRG+ F+ + A + +
Sbjct: 1 MFVGGLNWDTSDEGLRNYFSQFGKVDACTIMRD-QTGRSRGFAFLTFEDPAAVNAVM 56
>gi|388858327|emb|CCF48115.1| related to glycine-rich RNA-binding protein [Ustilago hordei]
Length = 193
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 56/79 (70%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSW+ T +SL AF YG + V+ D E+GRSRG+GFV ++T+ E + A+ +
Sbjct: 4 KVYVGNLSWNTTDDSLAHAFSAYGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAAIAA 63
Query: 128 LNGVELEGRAMRVSLAQGR 146
LN EL+GR +RV++A R
Sbjct: 64 LNEQELDGRRIRVNMANSR 82
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
L+ V+ DRETGRSRGF FVT +T + +A I L+ +E GR +RVN ++
Sbjct: 29 LTDYIVMKDRETGRSRGFGFVTFATQGEADAAIAALNEQELDGRRIRVNMAN 80
>gi|449438165|ref|XP_004136860.1| PREDICTED: uncharacterized protein LOC101215898 [Cucumis sativus]
gi|449478936|ref|XP_004155458.1| PREDICTED: uncharacterized protein LOC101227324 [Cucumis sativus]
Length = 211
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 60/81 (74%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
E +++ F+G LSWS + L +AF+++G++V A+V+ D SGRSRG+GFV + K M+
Sbjct: 4 EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDE 63
Query: 124 ALESLNGVELEGRAMRVSLAQ 144
A++++NG++L+GR++ V AQ
Sbjct: 64 AIKAMNGMDLDGRSITVDKAQ 84
>gi|453087889|gb|EMF15930.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 486
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
Query: 15 RSRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVG 72
+S+G+ FV ++ L+GR + +RVN++ + F +FVG
Sbjct: 119 QSKGYNYGFVEYDDPGAAERAMQTLNGRRVHQQEIRVNWAYQSNTSAKEDTSNHFHIFVG 178
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
+LS V E L QAF +G V ARV++D ++GRSRGYGF + + E E AL S++G
Sbjct: 179 DLSNEVNDEVLLQAFSAFGTVSEARVMWDMKTGRSRGYGFAAFRDRGEAEKALSSMDGEW 238
Query: 133 LEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 239 LGSRAIRCNWANQK 252
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKP-- 57
+S+ V++D +TGRSRG+ F + + ++DG E+LG R +R N+++ K +P
Sbjct: 199 VSEARVMWDMKTGRSRGYGFAAFRDRGEAEKALSSMDG-EWLGSRAIRCNWANQKGQPSF 257
Query: 58 --------------------KLPLYAETDFKL------------FVGNLSWSVTTESLTQ 85
+ P +++ +VGNL+ T L
Sbjct: 258 SQQQAMAQMGMTPTTPYGHHQFPTQGSQSYEMIVQQTPQWQTTVYVGNLTPYTTQNDLVP 317
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G V R D RG+ F+ T A+ L+G ++ GR ++ S +
Sbjct: 318 LFQNFGYVTETRFQSD------RGFAFIKMDTHENAANAICQLSGYQVNGRPLKCSWGKD 371
Query: 146 R 146
R
Sbjct: 372 R 372
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 126
L+VG L VT + L Q F+ G+V +++ D ++ +S+G YGFV Y E A++
Sbjct: 83 LYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPD-KNFQSKGYNYGFVEYDDPGAAERAMQ 141
Query: 127 SLNGVELEGRAMRVSLA 143
+LNG + + +RV+ A
Sbjct: 142 TLNGRRVHQQEIRVNWA 158
>gi|300120130|emb|CBK19684.2| unnamed protein product [Blastocystis hominis]
Length = 309
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ +++T SRGF FV +A + +DG E GR L++ SDK + P
Sbjct: 30 ISDCYVIRNKKTNLSRGFGFVHFEDKAGMDACLA-MDGTECEGRTLKITISDKERAPTPR 88
Query: 62 YAETD-FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
D K+ V LSW+ T+ESL + +YG + +VLYD ++ SRG + +A+
Sbjct: 89 SEYNDKNKVIVNCLSWNTTSESLAEYLSQYGELEDCKVLYDNKTQHSRGLAVARFKNEAD 148
Query: 121 METALESLNGVELEGRAMRV 140
M A++++N + EGR + +
Sbjct: 149 MLRAIDAVNEKDFEGRVITI 168
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 74 LSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVEL 133
+ WS ++L + F+ G + V+ + ++ SRG+GFV + KA M+ L +++G E
Sbjct: 11 IPWSFDNDALYEFFKGCGAISDCYVIRNKKTNLSRGFGFVHFEDKAGMDACL-AMDGTEC 69
Query: 134 EGRAMRVSLAQGRRS 148
EGR ++++++ R+
Sbjct: 70 EGRTLKITISDKERA 84
>gi|110739563|dbj|BAF01690.1| 31 kDa RNA binding protein [Arabidopsis thaliana]
Length = 84
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 54/78 (69%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
++VGNL W V L Q F E+G VV ARV+YD E+GRSRG+GFV S E+ A+ +L
Sbjct: 1 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 60
Query: 129 NGVELEGRAMRVSLAQGR 146
+G LEGRA+RV+ A+ R
Sbjct: 61 DGQNLEGRAIRVNGAEER 78
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+YDRETGRSRGF FVTMS V++ N I LDG+ GR +RVN +++ P+
Sbjct: 30 VVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNGAEERPPR 81
>gi|326476993|gb|EGE01003.1| nucleolin protein Nsr1 [Trichophyton equinum CBS 127.97]
Length = 479
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 29/168 (17%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN----------- 50
LS ++ DRE+GRSRGF +V VED E GR + ++
Sbjct: 264 LSGTRIVTDRESGRSRGFGYVEFVNVEDAVKAHGAKKDAELDGRKMNLDYANARANGNAN 323
Query: 51 -----------FSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVL 99
F D+ P E+D LF+GN+S+S + + F +YG + G R+
Sbjct: 324 PRERADNRAKSFGDQTSP------ESDT-LFIGNISFSADENMVQELFSKYGTIQGIRLP 376
Query: 100 YDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRR 147
D +SGR +G+G+V +S+ E ALE+ NG +L GR++R+ + ++
Sbjct: 377 TDPDSGRPKGFGYVQFSSVDEARAALEAENGADLGGRSIRLDFSTPKQ 424
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW+V E L F+E+G + G R++ D ESGRSRG+G+V + + A +
Sbjct: 240 LFVGNLSWNVDEEWLRSEFEEFGELSGTRIVTDRESGRSRGFGYVEFVNVEDAVKAHGAK 299
Query: 129 NGVELEGRAM 138
EL+GR M
Sbjct: 300 KDAELDGRKM 309
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
D ++GR +GF +V S+V++ A +E +G + GR +R++FS PK P
Sbjct: 378 DPDSGRPKGFGYVQFSSVDEARAALEAENGADLGGRSIRLDFST---PKQP 425
>gi|255565552|ref|XP_002523766.1| dc50, putative [Ricinus communis]
gi|223536978|gb|EEF38615.1| dc50, putative [Ricinus communis]
Length = 210
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%)
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ E +++ F+G LSWS + L +AF+++G+++ A+V+ D SGRSRG+GFV + K
Sbjct: 1 MSEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKA 60
Query: 121 METALESLNGVELEGRAMRVSLAQ 144
ME A+E +NG++L+GR + V AQ
Sbjct: 61 MEEAIEEMNGMDLDGRTITVDKAQ 84
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 1 MLSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP 57
L + V+ D+ +GRSRGF FVT + IE ++G + GR + V DK +P
Sbjct: 32 HLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIEEMNGMDLDGRTITV---DKAQP 85
>gi|357152187|ref|XP_003576037.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 102
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 60/83 (72%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+++ FVG L+W +SL AF+ +G ++ A+V+ D E+GRSRG+GFV ++T+ M+ A+
Sbjct: 3 EYRCFVGGLAWVTDDQSLENAFRSFGEILDAKVIPDRETGRSRGFGFVTFTTEQAMQNAI 62
Query: 126 ESLNGVELEGRAMRVSLAQGRRS 148
++NG +++GR + V++AQ R +
Sbjct: 63 NAMNGKDIDGRTISVNMAQARNN 85
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
V+ DRETGRSRGF FVT +T + I ++G++ GR + VN +
Sbjct: 35 VIPDRETGRSRGFGFVTFTTEQAMQNAINAMNGKDIDGRTISVNMA 80
>gi|297825019|ref|XP_002880392.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
gi|297326231|gb|EFH56651.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
Length = 159
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 59/82 (71%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ FVG L+W+ +L AF +YG+VV ++++ D E+GRSRG+GFV + + M+
Sbjct: 4 ADVEYRCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEKSMK 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG EL+GR++ V+ AQ
Sbjct: 64 DAIEGMNGQELDGRSITVNEAQ 85
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + IE ++G+E GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQELDGRSITVN 82
>gi|242078001|ref|XP_002443769.1| hypothetical protein SORBIDRAFT_07g001610 [Sorghum bicolor]
gi|241940119|gb|EES13264.1| hypothetical protein SORBIDRAFT_07g001610 [Sorghum bicolor]
Length = 308
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 72/130 (55%), Gaps = 14/130 (10%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRIL-------------RVNFSDKPK 56
D ETG SRG AFVTM ++ + I LDG E GR + VN +
Sbjct: 157 DAETGISRGTAFVTMRSLAEARTAINALDGFELDGREVFVKLASDVISNRKNVNLAHITP 216
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
K ++ E+ K++VGNL+WSV + L + F + G VV R+L D + GR+R YGF+ +S
Sbjct: 217 MKDHIF-ESPHKVYVGNLAWSVQPQDLRELFTQCGTVVSTRLLTDRKGGRNRVYGFLSFS 275
Query: 117 TKAEMETALE 126
+ E+E AL+
Sbjct: 276 SAEELEAALK 285
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 55 PKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
P+P+ +LFV NL + L Q F +G V+ + D E+G SRG FV
Sbjct: 120 PRPR---------ELFVCNLPRRCDVQDLLQLFTPHGTVLSVEISRDAETGISRGTAFVT 170
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLA 143
+ AE TA+ +L+G EL+GR + V LA
Sbjct: 171 MRSLAEARTAINALDGFELDGREVFVKLA 199
>gi|302767104|ref|XP_002966972.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
gi|300164963|gb|EFJ31571.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
Length = 654
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGR---------ILRVNF 51
V+ E +S+GF FV E A +E ++ + Y+GR ILR F
Sbjct: 246 VIMKDENDKSKGFGFVNFDDPEAARAAVETMNNSQLGSRTIYVGRAQKKAEREQILRRQF 305
Query: 52 SDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
+K + Y + L+V NL S+ E+L Q F YGN+ A+V+ D E G S+G+G
Sbjct: 306 EEKRMEQFQKYQGAN--LYVKNLDDSIDDETLKQEFSRYGNITSAKVMRD-EKGISKGFG 362
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
FVC+++ E A NG+ + G+ + V++AQ
Sbjct: 363 FVCFTSPEEASRAATETNGLMINGKPIYVAMAQ 395
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDF-KLF 70
+ GRS+G+ FV T E N IE ++G + +G+ + V K +L ET F +F
Sbjct: 160 QDGRSKGYGFVHFETDEAANLAIEKVNGMQLVGKKVFVAKFVKRSDRLAATGETKFTNVF 219
Query: 71 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 130
V NL + E + + F +G + ++ D E+ +S+G+GFV + A+E++N
Sbjct: 220 VKNLDPEMAEEEIKEHFSTFGVITNVVIMKD-ENDKSKGFGFVNFDDPEAARAAVETMNN 278
Query: 131 VELEGRAMRVSLAQGR 146
+L R + V AQ +
Sbjct: 279 SQLGSRTIYVGRAQKK 294
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 75/142 (52%), Gaps = 7/142 (4%)
Query: 1 MLSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
+++ + V D T RS G+ +V S+ D +E L+ G+ +R+ +S + P
Sbjct: 63 LVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAMEALNYTPINGKTIRIMWSHRD----P 118
Query: 61 LYAETDF-KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
++ +F+ NL S+ ++L F +G ++ ++ + + GRS+GYGFV + T
Sbjct: 119 STRKSGVGNIFIKNLDESIDNKALHDTFIAFGPILSCKIAH--QDGRSKGYGFVHFETDE 176
Query: 120 EMETALESLNGVELEGRAMRVS 141
A+E +NG++L G+ + V+
Sbjct: 177 AANLAIEKVNGMQLVGKKVFVA 198
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L +V L F + G V RV D + RS GYG+V YS+ A+ A+E+L
Sbjct: 40 LYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAMEAL 99
Query: 129 NGVELEGRAMRV 140
N + G+ +R+
Sbjct: 100 NYTPINGKTIRI 111
>gi|254572962|ref|XP_002493590.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|238033389|emb|CAY71411.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|328354581|emb|CCA40978.1| Nuclear localization sequence-binding protein [Komagataella
pastoris CBS 7435]
Length = 362
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 14/153 (9%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
V+ +R TGRSRG+ +V +E + G+E GR + V+ S+ KP P D
Sbjct: 157 VMMERATGRSRGYGYVDFDNKASAEKALEEMQGKEIDGRPINVDMSNS-KPAAPAARNND 215
Query: 67 FK-------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
LF+GNLS+ ++L + F ++GNV R+ E+ + +G+G+V
Sbjct: 216 RASQYGDKRSPPSDTLFLGNLSFQADRDTLFELFSKHGNVTSVRIPTHPETEQPKGFGYV 275
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+S+ E ALE+LNG ++ R +R+ + R
Sbjct: 276 QFSSVDEATGALEALNGEYVDNRPIRLDYSTPR 308
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVG LSWS+ E L + F+ G VVGARV+ + +GRSRGYG+V + KA E ALE +
Sbjct: 128 LFVGRLSWSIDDEWLKKEFEHIGGVVGARVMMERATGRSRGYGYVDFDNKASAEKALEEM 187
Query: 129 NGVELEGRAMRVSLAQGR 146
G E++GR + V ++ +
Sbjct: 188 QGKEIDGRPINVDMSNSK 205
>gi|354544201|emb|CCE40924.1| hypothetical protein CPAR2_109610 [Candida parapsilosis]
Length = 475
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 48/151 (31%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-----------DKP 55
V+ +R TG+SRG+ +V ++ IE + GRE GR + ++ S D+
Sbjct: 266 VIMERATGKSRGYGYVDFTSKAAAEKAIEEMQGREIDGRPINLDLSTGRPHATKPNNDRA 325
Query: 56 KPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
K + LF+GNLS++ + L + F EYGNV+ R+ ++ + +G+G+V +
Sbjct: 326 KQFGDQQSPPSDTLFIGNLSFNANRDKLFEIFGEYGNVISCRLPTHPDTQQPKGFGYVQF 385
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ E + ALE+LNG LEGR R+ + R
Sbjct: 386 GSVDEAKAALEALNGEYLEGRPCRLDFSAPR 416
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 53/78 (67%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+F G LSW++ + L + F+ V+GARV+ + +G+SRGYG+V +++KA E A+E +
Sbjct: 237 VFAGRLSWNIDDDWLKREFEHLEGVIGARVIMERATGKSRGYGYVDFTSKAAAEKAIEEM 296
Query: 129 NGVELEGRAMRVSLAQGR 146
G E++GR + + L+ GR
Sbjct: 297 QGREIDGRPINLDLSTGR 314
>gi|307105138|gb|EFN53389.1| hypothetical protein CHLNCDRAFT_36600 [Chlorella variabilis]
Length = 321
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 13/145 (8%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIEN---LDGREYLGRILRVNFSDKPKPK 58
+ + V+ DR+TGR RGF FVT + +AV+E+ +DGR+ + V KPK +
Sbjct: 35 IVEAVVMRDRQTGRPRGFGFVTFTEPAAADAVVEDVHVIDGRQIDAK-KSVPQEMKPKAR 93
Query: 59 LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
K+FVG LS T + + F ++G VV A+++ D SGRSRG+GFV ++
Sbjct: 94 ---------KVFVGGLSPDTTEDQFREYFSQFGEVVEAQIMQDHMSGRSRGFGFVTFAED 144
Query: 119 AEMETALESLNGVELEGRAMRVSLA 143
A E+ + +L G+ + V A
Sbjct: 145 ASAESVFAAGTMHDLGGKKVEVKPA 169
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
T KLF+G LSW T E L F +YG++V A V+ D ++GR RG+GFV ++ A +
Sbjct: 6 PTSAKLFLGGLSWDTTEEKLRDHFSKYGSIVEAVVMRDRQTGRPRGFGFVTFTEPAAADA 65
Query: 124 ALESLNGVE 132
+E ++ ++
Sbjct: 66 VVEDVHVID 74
>gi|2267567|gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
gi|2267569|gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargonium x hortorum]
Length = 166
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 57/82 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ FVG L+W+ +L QAF +YG VV ++++ D E+GRSRG+GFV +S + M
Sbjct: 4 ADVEYRCFVGGLAWATDDHALEQAFSQYGEVVESKIINDRETGRSRGFGFVTFSNEKSMN 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT S + N IE ++G+ GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFSNEKSMNDAIEGMNGQNLDGRNITVN 82
>gi|302904116|ref|XP_003049006.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729940|gb|EEU43293.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 474
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 46/135 (34%), Positives = 71/135 (52%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+ R + FV ++ L+GR +RVN++ + F +FV
Sbjct: 119 KNARGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTSNKEDTSNHFHIFV 178
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS V E L QAF +G+V ARV++D ++GRSRGYGFV + + + E AL S++G
Sbjct: 179 GDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGE 238
Query: 132 ELEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 239 WLGSRAIRCNWANQK 253
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKP-- 57
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P
Sbjct: 200 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSM 258
Query: 58 --------------------KLPLYAETDFKL------------FVGNLSWSVTTESLTQ 85
+ P + +++ +VGNL+ T +
Sbjct: 259 AQQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPSWQTTCYVGNLTPYTTPNDVVP 318
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ T A+ +NG + GR ++ S +
Sbjct: 319 LFQNFGFVVESRFQAD------RGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKD 372
Query: 146 R 146
+
Sbjct: 373 K 373
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+V +++ D ++ R YGFV Y E A+++L
Sbjct: 86 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNARGYNYGFVEYDDPGAAERAMQTL 144
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 145 NGRRVHQSEIRVNWA 159
>gi|223974749|gb|ACN31562.1| unknown [Zea mays]
Length = 326
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 58/85 (68%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 4 SDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMR 63
Query: 123 TALESLNGVELEGRAMRVSLAQGRR 147
A+E +NG EL+GR + V+ AQ RR
Sbjct: 64 NAIEGMNGKELDGRNITVNEAQFRR 88
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRET RSRGF FVT ST E IE ++G+E GR + VN
Sbjct: 39 IILDRETQRSRGFGFVTFSTEEAMRNAIEGMNGKELDGRNITVN 82
>gi|322695427|gb|EFY87235.1| RNA recognition motif containing protein [Metarhizium acridum CQMa
102]
Length = 725
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 79/150 (52%), Gaps = 15/150 (10%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF----------SDKPK 56
V+ D++T SRG+ FVT++ +D A LD E+ G+ +R++ S+K
Sbjct: 73 VVVDQKTKESRGYGFVTLADSDDALAAKNTLDKAEWEGKRIRIDIAEPRKRNAANSEKTV 132
Query: 57 PKLPLYAETDF--KLFVGNLSWSV-TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
K P E+ KL V NL WS+ T+E L+ F+ YG V A + G+ RG+GFV
Sbjct: 133 HKKPGREESQKPPKLIVRNLPWSIKTSEQLSHLFKSYGKVKFADLPQS--KGKLRGFGFV 190
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSLA 143
K E ALE +NG E++GR + V A
Sbjct: 191 TIRGKKNAEKALEGVNGKEIDGRTLAVDWA 220
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFV +L +VT E+L F ++ V A V+ D ++ SRGYGFV + + A +L
Sbjct: 44 LFVRSLPANVTNEALADFFSQHFPVKHAVVVVDQKTKESRGYGFVTLADSDDALAAKNTL 103
Query: 129 NGVELEGRAMRVSLAQGRR 147
+ E EG+ +R+ +A+ R+
Sbjct: 104 DKAEWEGKRIRIDIAEPRK 122
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+F+ NL ++ T E L F +G V ARV+ D + + G GFVC+ +++
Sbjct: 328 VFIRNLPFTTTDEQLKGFFSHFGAVRYARVVIDKVTEKPAGTGFVCFVKQSD 379
>gi|296423176|ref|XP_002841131.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637365|emb|CAZ85322.1| unnamed protein product [Tuber melanosporum]
Length = 498
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 72/135 (53%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+ + + F+ ++ L+GR +RVN++ + F +FV
Sbjct: 121 KNSKGYNYGFIEYDDPGAAERAMQTLNGRRIHQAEIRVNWAYQSNQSSKEDTTNHFHIFV 180
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS V E L QAF +G+V ARV++D ++GRSRGYGFV + +A+ E AL S++G
Sbjct: 181 GDLSNEVNDEVLMQAFSTFGSVSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGE 240
Query: 132 ELEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 241 WLGSRAIRCNWANQK 255
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 202 VSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 260
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 261 SQQAAMAAMGMTPTTPYGHHNFPTHGVQSYDMIVQQTPQWQTTCYVGNLTPYTTQNDLVP 320
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ FV T A+ L+G + GR ++ S +
Sbjct: 321 LFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKD 374
Query: 146 R 146
R
Sbjct: 375 R 375
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT E L Q F+ G+V +++ D S + YGF+ Y E A+++L
Sbjct: 88 LYVGGLDPRVTEEILKQIFETTGHVQNVKIIPDKNS-KGYNYGFIEYDDPGAAERAMQTL 146
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 147 NGRRIHQAEIRVNWA 161
>gi|346319566|gb|EGX89167.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cordyceps militaris CM01]
Length = 450
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 70/128 (54%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV ++ L+GR +RVN++ + F +FVG+LS V
Sbjct: 112 YGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTSGKEDTSGHFHIFVGDLSNEV 171
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
E LTQAF +G+V ARV++D ++GRSRGYGFV + + E E AL S++G L RA+
Sbjct: 172 NDEILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAI 231
Query: 139 RVSLAQGR 146
R + A +
Sbjct: 232 RCNWANQK 239
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 43/183 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSDKP----- 55
+S+ V++D +TGRSRG+ FV + + ++DG E+LG R +R N++++
Sbjct: 186 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDG-EWLGSRAIRCNWANQKGQPSM 244
Query: 56 -----------KPKLP----------------LYAET---DFKLFVGNLSWSVTTESLTQ 85
P P + A+T ++VGNL+ T +
Sbjct: 245 AQQQAMQAMGLTPTTPFGHHQFPTHGVGSYDVILAQTPTWQTTVYVGNLTPYTTPNDVVP 304
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ T A+ +NG + GR ++ S +
Sbjct: 305 LFQNFGFVVESRFQAD------RGFAFIKMDTHENASMAICQMNGYNVNGRPLKCSWGKD 358
Query: 146 RRS 148
+ S
Sbjct: 359 KTS 361
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+++L
Sbjct: 72 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGFNYGFVEYDDPGAAERAMQTL 130
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 131 NGRRVHQSEIRVNWA 145
>gi|311780287|gb|ADQ08684.1| putative glycine-rich RNA-binding protein 1 [Malus hupehensis]
Length = 164
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 58/82 (70%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AE +F+ FVG L+W+ E+L +AF +YG ++ ++++ D E+GRSRG+GFV + ++ M
Sbjct: 4 AEIEFRCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAMR 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + + IE ++G+ GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFGSEQAMRDAIEGMNGQNLDGRNITVN 82
>gi|296142019|gb|ADG96008.1| putative glycine-rich RNA-binding protein 1 [Malus prunifolia]
Length = 171
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 58/82 (70%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AE +F+ FVG L+W+ E+L +AF +YG ++ ++++ D E+GRSRG+GFV + ++ M
Sbjct: 4 AEIEFRCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAMR 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + + IE ++G+ GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFGSEQAMRDAIEGMNGQNLDGRNITVN 82
>gi|164659141|ref|XP_001730695.1| hypothetical protein MGL_2149 [Malassezia globosa CBS 7966]
gi|159104592|gb|EDP43481.1| hypothetical protein MGL_2149 [Malassezia globosa CBS 7966]
Length = 190
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 55/79 (69%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSWS T + L QAF YG + V+ D +SGRSRG+GFV + T+ E + A+ +
Sbjct: 3 KVYVGNLSWSTTDDGLAQAFSPYGQLTDYIVMKDRDSGRSRGFGFVTFMTQQEADAAIMA 62
Query: 128 LNGVELEGRAMRVSLAQGR 146
LN EL+GR +RV++A R
Sbjct: 63 LNEQELDGRRIRVNMANSR 81
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL 59
L+ V+ DR++GRSRGF FVT T ++ +A I L+ +E GR +RVN ++ P +
Sbjct: 28 LTDYIVMKDRDSGRSRGFGFVTFMTQQEADAAIMALNEQELDGRRIRVNMANSRPPMV 85
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 58/79 (73%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLF+G +S+S +SL +AF +YG VV AR++ D E+GRSRG+GF+ Y++ E +A+++
Sbjct: 43 KLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQA 102
Query: 128 LNGVELEGRAMRVSLAQGR 146
L+G +L GR +RV+ A R
Sbjct: 103 LDGQDLHGRPIRVNYANER 121
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
++ DRETGRSRGF F+T ++VE+ ++ I+ LDG++ GR +RVN++++ +P+
Sbjct: 73 IIMDRETGRSRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYANE-RPR 123
>gi|108863012|gb|ABG22105.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
Length = 117
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 59/85 (69%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ +++ FVG L+W+ SL AF +G ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRD 64
Query: 124 ALESLNGVELEGRAMRVSLAQGRRS 148
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 65 AIEGMNGKELDGRNITVNEAQSRRS 89
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT S+ + IE ++G+E GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVN 82
>gi|328767903|gb|EGF77951.1| hypothetical protein BATDEDRAFT_27077 [Batrachochytrium
dendrobatidis JAM81]
Length = 106
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 54/79 (68%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K+FVGNLSW SL AF ++G VV + VL D E+GRSRG+GFV +S+ A+++
Sbjct: 12 KVFVGNLSWGTDNNSLADAFSQFGEVVDSIVLKDRETGRSRGFGFVTFSSPESASAAVDA 71
Query: 128 LNGVELEGRAMRVSLAQGR 146
+NG +L GR +RV+LA R
Sbjct: 72 MNGQDLNGRNIRVNLANER 90
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
VL DRETGRSRGF FVT S+ E +A ++ ++G++ GR +RVN +++
Sbjct: 42 VLKDRETGRSRGFGFVTFSSPESASAAVDAMNGQDLNGRNIRVNLANE 89
>gi|392869588|gb|EJB11873.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides immitis RS]
Length = 466
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 15 RSRG--FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVG 72
+S+G + FV ++ L+GR +RVN++ + F +FVG
Sbjct: 130 QSKGLNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNANKEDTSNHFHIFVG 189
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
+LS V E L QAF +G+V ARV++D ++GRSRGYGFV + +A+ E AL S++G
Sbjct: 190 DLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEW 249
Query: 133 LEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 250 LGSRAIRCNWANQK 263
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 210 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 268
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 269 SQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVP 328
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ FV T A+ LNG + GR ++ S +
Sbjct: 329 LFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 382
Query: 146 R 146
R
Sbjct: 383 R 383
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 126
L+VG L VT + L Q F+ G+V +++ D ++ +S+G YGFV Y E A++
Sbjct: 94 LYVGGLDPRVTEDILRQIFETTGHVQSVKIIPD-KNFQSKGLNYGFVEYDDPGAAERAMQ 152
Query: 127 SLNGVELEGRAMRVSLA 143
+LNG + +RV+ A
Sbjct: 153 TLNGRRVHQSEIRVNWA 169
>gi|119174082|ref|XP_001239402.1| hypothetical protein CIMG_09023 [Coccidioides immitis RS]
Length = 485
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 15 RSRG--FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVG 72
+S+G + FV ++ L+GR +RVN++ + F +FVG
Sbjct: 130 QSKGLNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNANKEDTSNHFHIFVG 189
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
+LS V E L QAF +G+V ARV++D ++GRSRGYGFV + +A+ E AL S++G
Sbjct: 190 DLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEW 249
Query: 133 LEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 250 LGSRAIRCNWANQK 263
Score = 61.6 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 210 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 268
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 269 SQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVP 328
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ FV T A+ LNG + GR ++ S +
Sbjct: 329 LFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 382
Query: 146 R 146
R
Sbjct: 383 R 383
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 126
L+VG L VT + L Q F+ G+V +++ D ++ +S+G YGFV Y E A++
Sbjct: 94 LYVGGLDPRVTEDILRQIFETTGHVQSVKIIPD-KNFQSKGLNYGFVEYDDPGAAERAMQ 152
Query: 127 SLNGVELEGRAMRVSLA 143
+LNG + +RV+ A
Sbjct: 153 TLNGRRVHQSEIRVNWA 169
>gi|159127852|gb|EDP52967.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus A1163]
Length = 546
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 83/169 (49%), Gaps = 29/169 (17%)
Query: 2 LSKLTVLYDRETGRSRGFAFV-----TMSTVEDCNAVIENLDGREY-----LGRILRVN- 50
LS + ++ DR++GRSRGF +V + +DGR+ GR N
Sbjct: 328 LSGVRIVTDRDSGRSRGFGYVEYVNAADAAKAYNAKKDTEIDGRKINLDYATGRPANNNN 387
Query: 51 -----------FSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVL 99
F D+ P E+D LFVGN+ +S +S+++ F + G +VG R+
Sbjct: 388 NQDRAQARARNFGDQTSP------ESDT-LFVGNIPFSANEDSVSELFGQSGTIVGIRLP 440
Query: 100 YDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
D ESGR +G+G+V +S+ E A LNG EL GR +R+ + R S
Sbjct: 441 TDPESGRPKGFGYVQFSSVDEARQAFNDLNGAELNGRPVRLDFSTPRPS 489
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW+V E L Q F+ +G + G R++ D +SGRSRG+G+V Y A+ A +
Sbjct: 304 LFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGRSRGFGYVEYVNAADAAKAYNAK 363
Query: 129 NGVELEGRAMRVSLAQGR 146
E++GR + + A GR
Sbjct: 364 KDTEIDGRKINLDYATGR 381
>gi|121705054|ref|XP_001270790.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
gi|119398936|gb|EAW09364.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
Length = 514
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 87/166 (52%), Gaps = 20/166 (12%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN----------- 50
LS + ++ DR++GRSRGF +V + D + E GR + ++
Sbjct: 286 LSGVRIVTDRDSGRSRGFGYVEYVSAADAAKAYKAKKDTELDGRKINLDYATGRPANNQQ 345
Query: 51 ---FSDKPKPKLPLY-----AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDG 102
F D+ + + + E+D LFVGNL +S +S+ + F E G++VG R+ D
Sbjct: 346 GGGFQDRAQARARSFGDQSSPESD-TLFVGNLPFSANEDSVQELFGEKGSIVGIRLPTDP 404
Query: 103 ESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+SGR +G+G+V +++ E A SLNG EL+GR +R+ + R S
Sbjct: 405 DSGRPKGFGYVQFASVDEAREAFNSLNGAELDGRPVRLDFSTPRPS 450
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LF+GNLSW+V + L Q F+ +G + G R++ D +SGRSRG+G+V Y + A+ A ++
Sbjct: 262 LFIGNLSWNVDEDWLRQEFETFGELSGVRIVTDRDSGRSRGFGYVEYVSAADAAKAYKAK 321
Query: 129 NGVELEGRAMRVSLAQGR 146
EL+GR + + A GR
Sbjct: 322 KDTELDGRKINLDYATGR 339
>gi|4704605|gb|AAD28176.1|AF109917_1 glycine-rich RNA-binding protein [Picea glauca]
Length = 155
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 58/82 (70%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +F+ FVG L+WS SL +AF YG VV ++++ D E+GRSRG+GFV ++ + M
Sbjct: 4 ADVEFRCFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQSMR 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A++++NG L+GR++ V+ AQ
Sbjct: 64 DAIDAMNGKMLDGRSITVNPAQ 85
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + + I+ ++G+ GR + VN
Sbjct: 39 IISDRETGRSRGFGFVTFNDEQSMRDAIDAMNGKMLDGRSITVN 82
>gi|406861752|gb|EKD14805.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 495
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Query: 16 SRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGN 73
S+GF FV ++ L+GR +RVN++ + F +FVG+
Sbjct: 126 SKGFNYGFVEYDDPAAAERAMQTLNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGD 185
Query: 74 LSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVEL 133
LS V E L QAF +G+V ARV++D ++GRSRGYGFV + + + E AL S++G L
Sbjct: 186 LSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWL 245
Query: 134 EGRAMRVSLAQGR 146
RA+R + A +
Sbjct: 246 GSRAIRCNWANQK 258
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV +D + ++DG E+LG R +R N+++ K +P +
Sbjct: 205 VSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 263
Query: 60 P---------LYAETDF-------------------------KLFVGNLSWSVTTESLTQ 85
+ + T F ++VGNL+ T L
Sbjct: 264 SQQQAMSAMGMTSTTPFGHHHFPTHGVQSYDMIVQQTPAWQTTVYVGNLTPYTTQNDLIP 323
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ FV T A+ L+G + GR ++ S +
Sbjct: 324 LFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKD 377
Query: 146 R 146
+
Sbjct: 378 K 378
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+V +++ D S + YGFV Y A E A+++L
Sbjct: 91 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNS-KGFNYGFVEYDDPAAAERAMQTL 149
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 150 NGRRVHQAEIRVNWA 164
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 58/79 (73%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K+FVG +S+S +SL +AF +YG V+ ARV+ D E+GRSRG+GFV Y++ E +A+++
Sbjct: 44 KVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 103
Query: 128 LNGVELEGRAMRVSLAQGR 146
L+G +L GR +RV+ A R
Sbjct: 104 LDGQDLHGRRVRVNYANDR 122
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V+ DRETGRSRGF FVT ++ E+ ++ I+ LDG++ GR +RVN+++
Sbjct: 74 VIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
>gi|361127946|gb|EHK99901.1| putative Nucleolysin TIA-1 [Glarea lozoyensis 74030]
Length = 505
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 5/147 (3%)
Query: 5 LTVLYDRETG---RSRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL 59
+ ++ D+ G +++GF FV ++ L+GR +RVN++ +
Sbjct: 116 VKIIPDKNVGAEQQAKGFNYGFVEYDDPGAAERAMQTLNGRRVHQAEIRVNWAYQSNTSN 175
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
F +FVG+LS V E L QAF +G+V ARV++D ++GRSRGYGFV + +
Sbjct: 176 KEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERQ 235
Query: 120 EMETALESLNGVELEGRAMRVSLAQGR 146
+ E AL S++G L RA+R + A +
Sbjct: 236 DAEKALSSMDGEWLGSRAIRCNWANQK 262
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV +D + ++DG E+LG R +R N+++ K +P +
Sbjct: 209 VSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 267
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + F + +VGNL+ T L
Sbjct: 268 SQQQQMSAMGMTPTTPFGHHHFPTHGVQSFDMIVQQTPAWQTTCYVGNLTPYTTQNDLIP 327
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ FV T A+ L+G + GR ++ S +
Sbjct: 328 LFQNFGFVVETRFQAD------RGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKD 381
Query: 146 R 146
+
Sbjct: 382 K 382
Score = 43.5 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD---GESGRSRG--YGFVCYSTKAEMET 123
L+VG L VT + L Q F+ G+V +++ D G +++G YGFV Y E
Sbjct: 89 LYVGGLDPRVTEDVLRQIFETTGHVQHVKIIPDKNVGAEQQAKGFNYGFVEYDDPGAAER 148
Query: 124 ALESLNGVELEGRAMRVSLA 143
A+++LNG + +RV+ A
Sbjct: 149 AMQTLNGRRVHQAEIRVNWA 168
>gi|317030432|ref|XP_001392545.2| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus niger CBS 513.88]
Length = 478
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 2/144 (1%)
Query: 5 LTVLYDRETGRSRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLY 62
+ ++ D+ S+G+ FV ++ L+GR +RVN++ +
Sbjct: 120 VKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQSNSTNKED 179
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
F +FVG+LS V E L QAF +G+V ARV++D ++GRSRGYGFV + +++ +
Sbjct: 180 TSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDAD 239
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
AL S++G L RA+R + A +
Sbjct: 240 KALSSMDGEWLGSRAIRCNWANQK 263
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + + ++DG E+LG R +R N+++ K +P +
Sbjct: 210 VSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDG-EWLGSRAIRCNWANQKGQPSI 268
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 269 SQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLVP 328
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G V+ R+ D RG+ F+ T A+ LNG + GR ++ S +
Sbjct: 329 LFQNFGYVIETRLQAD------RGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 382
Query: 146 R 146
R
Sbjct: 383 R 383
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 126
L+VG L VT + L Q F+ G+VV +++ D S+G YGFV + E A++
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQ 152
Query: 127 SLNGVELEGRAMRVSLA 143
+LNG + +RV+ A
Sbjct: 153 TLNGRRIHQSEIRVNWA 169
>gi|2624326|emb|CAA05728.1| OsGRP1 [Oryza sativa Japonica Group]
Length = 160
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 59/85 (69%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ +++ FVG L+W+ SL AF +G ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRD 64
Query: 124 ALESLNGVELEGRAMRVSLAQGRRS 148
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 65 AIEGMNGKELDGRNITVNEAQSRRS 89
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT S+ + IE ++G+E GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVN 82
>gi|346979496|gb|EGY22948.1| gar2 [Verticillium dahliae VdLs.17]
Length = 485
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVG+L+W+V + L QAF E+ N+ ARV+ D E GRSRG+G+V +S + ALE+
Sbjct: 228 LFVGSLAWAVNDDILYQAFSEFPNLTSARVITDREGGRSRGFGYVDFSDAESAKAALEAK 287
Query: 129 NGVELEGRAMRVSLAQGRR 147
NG ELEGR M + + G+R
Sbjct: 288 NGTELEGRNMNIDFS-GKR 305
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 21/165 (12%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF-------SDK 54
L+ V+ DRE GRSRGF +V S E A +E +G E GR + ++F SD
Sbjct: 252 LTSARVITDREGGRSRGFGYVDFSDAESAKAALEAKNGTELEGRNMNIDFSGKRPERSDN 311
Query: 55 PKPKL---------PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG 105
P + L E+D LFVGN+S+ + +++ F R+ D ESG
Sbjct: 312 PGDRANDRAQRHGDSLSPESD-TLFVGNISFEMDQDTVHAFFATVAEPTSVRLPTDPESG 370
Query: 106 RSRGYGFVCYSTKAEMETALESLNGVEL----EGRAMRVSLAQGR 146
+G+G+V +S+ + + AL LNG L GRA+R+ A R
Sbjct: 371 NLKGFGYVSFSSIDDAKKALSELNGQYLGEGSSGRAVRLDYAGQR 415
>gi|225463887|ref|XP_002264022.1| PREDICTED: uncharacterized protein LOC100256416 isoform 1 [Vitis
vinifera]
gi|359493015|ref|XP_003634493.1| PREDICTED: uncharacterized protein LOC100256416 isoform 2 [Vitis
vinifera]
Length = 207
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 60/84 (71%)
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ +++ F+G LSWS + SL +AF+++G++V A+V+ D SGRSRG+GFV + K
Sbjct: 1 MSEHEEYRCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQA 60
Query: 121 METALESLNGVELEGRAMRVSLAQ 144
ME A++ ++G++L+GR++ V AQ
Sbjct: 61 MEDAIKEMHGMDLDGRSITVDKAQ 84
>gi|71000291|ref|XP_754840.1| nucleolin protein Nsr1 [Aspergillus fumigatus Af293]
gi|66852477|gb|EAL92802.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus Af293]
Length = 546
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 83/169 (49%), Gaps = 29/169 (17%)
Query: 2 LSKLTVLYDRETGRSRGFAFV-----TMSTVEDCNAVIENLDGREY-----LGRILRVN- 50
LS + ++ DR++GRSRGF +V + +DGR+ GR N
Sbjct: 328 LSGVRIVTDRDSGRSRGFGYVEYVNAADAAKAYNAKKDTEIDGRKINLDYATGRPANNNN 387
Query: 51 -----------FSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVL 99
F D+ P E+D LFVGN+ +S +S+++ F + G +VG R+
Sbjct: 388 NQDRAQARARNFGDQTSP------ESDT-LFVGNIPFSANEDSVSELFGQSGTIVGIRLP 440
Query: 100 YDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
D ESGR +G+G+V +S+ E A LNG EL GR +R+ + R S
Sbjct: 441 TDPESGRPKGFGYVQFSSVDEARQAFNDLNGAELNGRPVRLDFSTPRPS 489
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW+V E L Q F+ +G + G R++ D +SGRSRG+G+V Y A+ A +
Sbjct: 304 LFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGRSRGFGYVEYVNAADAAKAYNAK 363
Query: 129 NGVELEGRAMRVSLAQGR 146
E++GR + + A GR
Sbjct: 364 KDTEIDGRKINLDYATGR 381
>gi|30692254|ref|NP_849523.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661645|gb|AEE87045.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 126
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 57/82 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
+E +++ FVG L+W+ E L + F ++G+V+ ++++ D ESGRSRG+GFV + + M
Sbjct: 2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG EL+GR + V+ AQ
Sbjct: 62 DAIEEMNGKELDGRVITVNEAQ 83
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRE+GRSRGF FVT + IE ++G+E GR++ VN
Sbjct: 37 IINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVN 80
>gi|15235002|ref|NP_195637.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|544425|sp|Q03251.1|GRP8_ARATH RecName: Full=Glycine-rich RNA-binding protein 8; AltName:
Full=Protein CCR1
gi|16305|emb|CAA78712.1| glycine rich protein [Arabidopsis thaliana]
gi|166658|gb|AAA20201.1| ORF [Arabidopsis thaliana]
gi|166839|gb|AAA32854.1| RNA-binding protein [Arabidopsis thaliana]
gi|4914438|emb|CAB43641.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|7270909|emb|CAB80589.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|222423067|dbj|BAH19515.1| AT4G39260 [Arabidopsis thaliana]
gi|332661644|gb|AEE87044.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 169
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 57/82 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
+E +++ FVG L+W+ E L + F ++G+V+ ++++ D ESGRSRG+GFV + + M
Sbjct: 2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG EL+GR + V+ AQ
Sbjct: 62 DAIEEMNGKELDGRVITVNEAQ 83
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRE+GRSRGF FVT + IE ++G+E GR++ VN
Sbjct: 37 IINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVN 80
>gi|115529229|dbj|BAF34340.1| putative glycine-rich RNA-binding protein [Dianthus caryophyllus]
Length = 163
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AE +++ FVG LSW SL +AF ++G V ++++ D E+GRSRG+GFV ++ + M
Sbjct: 2 AEVEYRCFVGGLSWGTDDRSLAEAFNKFGEVTDSKIINDRETGRSRGFGFVTFANEQSMR 61
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A++ +NG EL+GR++ V+ AQ
Sbjct: 62 DAIDEMNGKELDGRSITVNEAQ 83
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + + I+ ++G+E GR + VN
Sbjct: 37 IINDRETGRSRGFGFVTFANEQSMRDAIDEMNGKELDGRSITVN 80
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 58/79 (73%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K+FVG +S+S +SL +AF +YG V+ ARV+ D E+GRSRG+GFV Y++ E +A+++
Sbjct: 44 KVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 103
Query: 128 LNGVELEGRAMRVSLAQGR 146
L+G +L GR +RV+ A R
Sbjct: 104 LDGQDLHGRRVRVNYANDR 122
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
V+ DRETGRSRGF FVT ++ E+ ++ I+ LDG++ GR +RVN+++
Sbjct: 74 VIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
>gi|302755232|ref|XP_002961040.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
gi|300171979|gb|EFJ38579.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
Length = 625
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 19/159 (11%)
Query: 1 MLSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGR--------- 45
+++ + ++ D E +S+GF FV E A +E ++ + Y+GR
Sbjct: 240 VITNVVIMKD-ENDKSKGFGFVNFDDPEAARAAVETMNNSQLGSRTIYVGRAQKKAEREQ 298
Query: 46 ILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG 105
ILR F +K + Y + L+V NL S+ E+L Q F YGN+ A+V+ D E G
Sbjct: 299 ILRRQFEEKRMEQFQKYQGAN--LYVKNLDDSIDDETLKQEFSRYGNITSAKVMRD-EKG 355
Query: 106 RSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
S+G+GFVC+++ E A NG+ + G+ + V++AQ
Sbjct: 356 ISKGFGFVCFTSPEEASRAATETNGLMINGKPIYVAMAQ 394
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 2/137 (1%)
Query: 11 RETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDF-KL 69
+ GRS+G+ FV T E N IE ++G + +G+ + V K +L ET F +
Sbjct: 158 HQDGRSKGYGFVHFETDEAANLAIEKVNGMQLVGKKVFVAKFVKRSDRLAATGETKFTNV 217
Query: 70 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 129
FV NL + E + + F +G + ++ D E+ +S+G+GFV + A+E++N
Sbjct: 218 FVKNLDPEMAEEEINEHFSTFGVITNVVIMKD-ENDKSKGFGFVNFDDPEAARAAVETMN 276
Query: 130 GVELEGRAMRVSLAQGR 146
+L R + V AQ +
Sbjct: 277 NSQLGSRTIYVGRAQKK 293
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 75/142 (52%), Gaps = 7/142 (4%)
Query: 1 MLSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
+++ + V D T RS G+ +V S+ D +E L+ G+ +R+ +S + P
Sbjct: 62 LVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAMEALNYTPINGKTIRIMWSHRD----P 117
Query: 61 LYAETDF-KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
++ +F+ NL S+ ++L F +G ++ ++ + + GRS+GYGFV + T
Sbjct: 118 STRKSGVGNIFIKNLDESIDNKALHDTFIAFGPILSCKIAH--QDGRSKGYGFVHFETDE 175
Query: 120 EMETALESLNGVELEGRAMRVS 141
A+E +NG++L G+ + V+
Sbjct: 176 AANLAIEKVNGMQLVGKKVFVA 197
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L +V L F + G V RV D + RS GYG+V YS+ A+ A+E+L
Sbjct: 39 LYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAMEAL 98
Query: 129 NGVELEGRAMRV 140
N + G+ +R+
Sbjct: 99 NYTPINGKTIRI 110
>gi|115489714|ref|NP_001067344.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|77557139|gb|ABA99935.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
gi|113649851|dbj|BAF30363.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|125580173|gb|EAZ21319.1| hypothetical protein OsJ_36973 [Oryza sativa Japonica Group]
gi|215769456|dbj|BAH01685.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 162
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 59/85 (69%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ +++ FVG L+W+ SL AF +G ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRD 64
Query: 124 ALESLNGVELEGRAMRVSLAQGRRS 148
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 65 AIEGMNGKELDGRNITVNEAQSRRS 89
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT S+ + IE ++G+E GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVN 82
>gi|469071|dbj|BAA03742.1| RNA-binding glycine-rich protein-1b [Nicotiana sylvestris]
gi|295393565|gb|ADG03638.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 148
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 58/86 (67%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AE ++ FVG L+W+ T +L AF YG V+ ++++ D E+GRSRG+GFV + + M
Sbjct: 2 AEVEYSCFVGGLAWATTDRTLADAFGTYGEVLDSKIINDRETGRSRGFGFVTFKDEKCMR 61
Query: 123 TALESLNGVELEGRAMRVSLAQGRRS 148
A+E +NG EL+GR++ V+ AQ R S
Sbjct: 62 DAIEGMNGQELDGRSITVNEAQARGS 87
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + IE ++G+E GR + VN
Sbjct: 37 IINDRETGRSRGFGFVTFKDEKCMRDAIEGMNGQELDGRSITVN 80
>gi|303314025|ref|XP_003067021.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106689|gb|EER24876.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320039295|gb|EFW21229.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides posadasii str. Silveira]
Length = 483
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/128 (35%), Positives = 70/128 (54%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV ++ L+GR +RVN++ + F +FVG+LS V
Sbjct: 134 YGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEV 193
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
E L QAF +G+V ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+
Sbjct: 194 NDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAI 253
Query: 139 RVSLAQGR 146
R + A +
Sbjct: 254 RCNWANQK 261
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 266
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 267 SQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVP 326
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ FV T A+ LNG + GR ++ S +
Sbjct: 327 LFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 380
Query: 146 R 146
R
Sbjct: 381 R 381
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+V +++ D S + YGFV Y E A+++L
Sbjct: 94 LYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNS-KGLNYGFVEYDDPGAAERAMQTL 152
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 153 NGRRVHQSEIRVNWA 167
>gi|41581275|emb|CAE47924.1| oligouridylate binding protein, putative [Aspergillus fumigatus]
Length = 485
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 71/128 (55%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV ++ L+GR +RVN++ + + F +FVG+LS V
Sbjct: 135 YGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQSNSANKEDTSSHFHIFVGDLSNEV 194
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
E L QAF +G+V ARV++D ++GRSRGYGFV + +A+ E AL +++G L RA+
Sbjct: 195 NDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAI 254
Query: 139 RVSLAQGR 146
R + A +
Sbjct: 255 RCNWANQK 262
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + +DG E+LG R +R N+++ K +P +
Sbjct: 209 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDG-EWLGSRAIRCNWANQKGQPSI 267
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 268 SQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVP 327
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
F +G V+ R+ D RG+ F+ T A+ LNG + GR ++ S +
Sbjct: 328 LFHNFGYVLETRLQAD------RGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 381
Query: 146 R 146
R
Sbjct: 382 R 382
Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE-SGRSRGYGFVCYSTKAEMETALES 127
L+VG L VT + L Q F+ G+V +++ D + + YGFV + E A+++
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAAERAMQT 152
Query: 128 LNGVELEGRAMRVSLA 143
LNG + +RV+ A
Sbjct: 153 LNGRRIHQSEIRVNWA 168
>gi|443895166|dbj|GAC72512.1| hypothetical protein PANT_7d00134 [Pseudozyma antarctica T-34]
Length = 301
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 56/79 (70%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSW+ T +SL AF +G + V+ D E+GRSRG+GFV ++T+ E + A+ +
Sbjct: 4 KVYVGNLSWNTTDDSLAHAFSAFGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAAIAA 63
Query: 128 LNGVELEGRAMRVSLAQGR 146
LN EL+GR +RV++A R
Sbjct: 64 LNEQELDGRRIRVNMANSR 82
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
L+ V+ DRETGRSRGF FVT +T + +A I L+ +E GR +RVN ++
Sbjct: 29 LTDYIVMKDRETGRSRGFGFVTFATQGEADAAIAALNEQELDGRRIRVNMANS 81
>gi|367026720|ref|XP_003662644.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
gi|347009913|gb|AEO57399.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
Length = 500
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 72/135 (53%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+ + + FV ++ L+GR +RVN++ + F +FV
Sbjct: 125 KNAKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNSNKEDTSNHFHIFV 184
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS V E L QAF +G++ ARV++D ++GRSRGYGFV + +A+ E AL S++G
Sbjct: 185 GDLSNEVNDEVLFQAFSAFGSISEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGE 244
Query: 132 ELEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 245 WLGSRAIRCNWANQK 259
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 206 ISEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 264
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T +
Sbjct: 265 AQQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMVVNQTPAWQTTCYVGNLTPYTTQTDIVP 324
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ T A+ LNG + GR ++ S +
Sbjct: 325 LFQNFGFVVESRFQAD------RGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 378
Query: 146 R 146
+
Sbjct: 379 K 379
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+++L
Sbjct: 92 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPD-KNAKGYNYGFVEYDDPGAAERAMQTL 150
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 151 NGRRVHQSEIRVNWA 165
>gi|226469234|emb|CAX70096.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 327
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 10/141 (7%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK------PKLPLYA 63
D +T RS+G A+V VE + L G LG +++ S K P LP +
Sbjct: 2 DNKTKRSKGIAYVEFREVESAQLAL-GLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPS 60
Query: 64 ETD---FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ + KL++G+L +++T E L F+ +G + +++ D + RS+GYGFV Y +
Sbjct: 61 QQNKGPMKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFVTYVNSDD 120
Query: 121 METALESLNGVELEGRAMRVS 141
+ AL+ LNG EL GR M+V+
Sbjct: 121 AKKALDQLNGFELAGRPMKVN 141
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF 51
+ + ++ D T RS+G+ FVT +D ++ L+G E GR ++VN
Sbjct: 93 IEDIKLIKDPATNRSQGYGFVTYVNSDDAKKALDQLNGFELAGRPMKVNH 142
>gi|320591904|gb|EFX04343.1| nucleolin protein [Grosmannia clavigera kw1407]
Length = 413
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD---KPKPKLPLYA 63
V+ DRET RSRGF +V +VE A + + G GR L+++FS K P +
Sbjct: 197 VITDRETQRSRGFGYVEFDSVEHAQAAFDKMTGYFLDGRELKIDFSTGRAKSNDANPAAS 256
Query: 64 -----------ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
E+D LFVGNLS+ E+++ F E NV R+ D ESGR +G+G+
Sbjct: 257 RAKKYGDVTSPESD-TLFVGNLSFDADEETVSAFFSEVANVKSLRLPTDMESGRPKGFGY 315
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRV 140
V + + + + A ++LNG GR +R+
Sbjct: 316 VSFYSLEDSKKAFDTLNGQSCAGRNVRL 343
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 52/91 (57%)
Query: 56 KPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
K K ET LFVGNLSW+V L F+ + + GARV+ D E+ RSRG+G+V +
Sbjct: 155 KAKTEEEGETSSTLFVGNLSWNVDDSVLYDEFKGFDGLTGARVITDRETQRSRGFGYVEF 214
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ + A + + G L+GR +++ + GR
Sbjct: 215 DSVEHAQAAFDKMTGYFLDGRELKIDFSTGR 245
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
L + D E+GR +GF +V+ ++ED + L+G+ GR +R+++S PKP+
Sbjct: 299 LRLPTDMESGRPKGFGYVSFYSLEDSKKAFDTLNGQSCAGRNVRLDYS-TPKPR 351
>gi|358371808|dbj|GAA88414.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus kawachii IFO 4308]
Length = 478
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 2/144 (1%)
Query: 5 LTVLYDRETGRSRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLY 62
+ ++ D+ S+G+ FV ++ L+GR +RVN++ +
Sbjct: 120 VKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQSNSTNKED 179
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
F +FVG+LS V E L QAF +G+V ARV++D ++GRSRGYGFV + +++ +
Sbjct: 180 TSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDAD 239
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
AL S++G L RA+R + A +
Sbjct: 240 KALSSMDGEWLGSRAIRCNWANQK 263
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + + ++DG E+LG R +R N+++ K +P +
Sbjct: 210 VSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDG-EWLGSRAIRCNWANQKGQPSI 268
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 269 SQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLVP 328
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G V+ R+ D RG+ F+ T A+ LNG + GR ++ S +
Sbjct: 329 LFQNFGYVIETRLQAD------RGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 382
Query: 146 R 146
R
Sbjct: 383 R 383
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 126
L+VG L VT + L Q F+ G+VV +++ D S+G YGFV + E A++
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQ 152
Query: 127 SLNGVELEGRAMRVSLA 143
+LNG + +RV+ A
Sbjct: 153 TLNGRRIHQSEIRVNWA 169
>gi|256082942|ref|XP_002577710.1| splicing factor [Schistosoma mansoni]
gi|360043601|emb|CCD81147.1| putative splicing factor [Schistosoma mansoni]
Length = 327
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 10/141 (7%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK------PKLPLYA 63
D +T RS+G A+V VE + L G LG +++ S K P LP +
Sbjct: 2 DNKTKRSKGIAYVEFREVESAQLAL-GLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPS 60
Query: 64 ETD---FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ + KL++G+L +++T E L F+ +G + +++ D + RS+GYGFV Y +
Sbjct: 61 QQNRGPMKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPTTNRSQGYGFVTYVNSDD 120
Query: 121 METALESLNGVELEGRAMRVS 141
+ AL+ LNG EL GR M+V+
Sbjct: 121 AKKALDQLNGFELAGRPMKVN 141
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF 51
+ + ++ D T RS+G+ FVT +D ++ L+G E GR ++VN
Sbjct: 93 IEDIKLIKDPTTNRSQGYGFVTYVNSDDAKKALDQLNGFELAGRPMKVNH 142
>gi|357473273|ref|XP_003606921.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507976|gb|AES89118.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 164
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 60/82 (73%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ FVG L+W+ +E+L +AF +YG ++ ++++ D E+GRSRG+GFV ++ + M
Sbjct: 4 ADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMR 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG +++GR + V+ AQ
Sbjct: 64 DAIEGMNGQDMDGRNITVNEAQ 85
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + + IE ++G++ GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDMDGRNITVN 82
>gi|134077058|emb|CAK39931.1| unnamed protein product [Aspergillus niger]
Length = 497
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 2/144 (1%)
Query: 5 LTVLYDRETGRSRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLY 62
+ ++ D+ S+G+ FV ++ L+GR +RVN++ +
Sbjct: 120 VKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQSNSTNKED 179
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
F +FVG+LS V E L QAF +G+V ARV++D ++GRSRGYGFV + +++ +
Sbjct: 180 TSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDAD 239
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
AL S++G L RA+R + A +
Sbjct: 240 KALSSMDGEWLGSRAIRCNWANQK 263
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + + ++DG E+LG R +R N+++ K +P +
Sbjct: 210 VSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDG-EWLGSRAIRCNWANQKGQPSI 268
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 269 SQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLVP 328
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G V+ R+ D RG+ F+ T A+ LNG + GR ++ S +
Sbjct: 329 LFQNFGYVIETRLQAD------RGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 382
Query: 146 R 146
R
Sbjct: 383 R 383
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 126
L+VG L VT + L Q F+ G+VV +++ D S+G YGFV + E A++
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQ 152
Query: 127 SLNGVELEGRAMRVSLA 143
+LNG + +RV+ A
Sbjct: 153 TLNGRRIHQSEIRVNWA 169
>gi|452819166|gb|EME26242.1| oligouridylate-binding protein, putative [Galdieria sulphuraria]
gi|452825749|gb|EME32744.1| oligouridylate-binding protein, putative [Galdieria sulphuraria]
Length = 309
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 5/147 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP-LYAET 65
V+ DR TGRS GF FV +E + GR G+ +R++++ + +
Sbjct: 44 VVGDRNTGRSLGFGFVDFYDRPTAIRAMELMHGRRVYGQEIRIDWAHAGAGAAGRILQDE 103
Query: 66 DFK----LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
D +FVGNL V E L +AF + +V GA++ D E+G GYGFV + K +
Sbjct: 104 DLANMHTIFVGNLGPDVDEEKLMKAFSSFSSVAGAKISKDVETGLPAGYGFVSFREKKDA 163
Query: 122 ETALESLNGVELEGRAMRVSLAQGRRS 148
+ A++++ G L GRA+R+ A+G+ +
Sbjct: 164 DLAMQTMTGYILSGRALRIDWARGKNA 190
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+Y + L+VGNL V TE L + F+ G V A+V+ D +GRS G+GFV + +
Sbjct: 7 IYQPSGMSLYVGNLDPRVCTELLQEIFELIGPVKLAKVVGDRNTGRSLGFGFVDFYDRPT 66
Query: 121 METALESLNGVELEGRAMRVS 141
A+E ++G + G+ +R+
Sbjct: 67 AIRAMELMHGRRVYGQEIRID 87
>gi|226499642|ref|NP_001147738.1| plastid-specific 30S ribosomal protein 2 [Zea mays]
gi|195613392|gb|ACG28526.1| plastid-specific 30S ribosomal protein 2 [Zea mays]
gi|414585685|tpg|DAA36256.1| TPA: plastid-specific 30S ribosomal protein 2 [Zea mays]
Length = 272
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 7/132 (5%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE----TDFKL 69
GR+RGFAFVTMST E+ A + L+ + +GR ++V FS + P KL
Sbjct: 103 GRNRGFAFVTMSTAEEAAAAADKLNSHDVMGRTIKVEFSKSFRRPAPPPPPGTIIERHKL 162
Query: 70 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 129
+V NL W ++ + F + N + A V++D +G++ GYGFV + TK E E AL L+
Sbjct: 163 YVSNLPWKARAPNVKEFFANF-NPLSANVIFD--NGKAAGYGFVSFGTKEEAEAALTELD 219
Query: 130 GVELEGRAMRVS 141
G EL GR +R++
Sbjct: 220 GKELLGRPVRLN 231
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 47 LRVNFSDKPKPKLPLYAETDF-----KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD 101
LRV S P+ + AE + KL+V NL WS + + F ++G V V+
Sbjct: 41 LRVAASSPPEAQAAPVAEDEQGEKRRKLYVANLPWSFPAPEIEKLFAQHGTVKDVEVI-K 99
Query: 102 GESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRR 147
G+ GR+RG+ FV ST E A + LN ++ GR ++V ++ R
Sbjct: 100 GKDGRNRGFAFVTMSTAEEAAAAADKLNSHDVMGRTIKVEFSKSFR 145
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF 51
V++D G++ G+ FV+ T E+ A + LDG+E LGR +R+N+
Sbjct: 189 NVIFD--NGKAAGYGFVSFGTKEEAEAALTELDGKELLGRPVRLNW 232
>gi|351704535|gb|EHB07454.1| Polyadenylate-binding protein 1 [Heterocephalus glaber]
Length = 281
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 16/153 (10%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRILR-VNFSDKPKP 57
+ V+ D E+G+S+GF FV+ ED ++ ++G+E Y+GR + V +PK
Sbjct: 16 VKVMTD-ESGKSKGFRFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVEPQTEPKH 74
Query: 58 KLPLYAETDF------KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
K + L+V NL + E L + F +G + A+V+ +G GRS+G+G
Sbjct: 75 KFEQMKQDTITRYQGVNLYVKNLDDGIDDEHLRKEFSPFGTITSAKVMMEG--GRSKGFG 132
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
FVC+S+ E A++ +NG + + + V+LAQ
Sbjct: 133 FVCFSSPEEATKAVKEMNGRTVATKPLYVALAQ 165
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 40 REYLGRILRVNFS-DKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARV 98
R+ + + + FS P + + KLF+G LS+S SL +AF +YG V+ ARV
Sbjct: 12 RQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAFHKYGEVIEARV 71
Query: 99 LYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ D E+GRSRG+GFV +++ E +A+++L+G +L GR +RV+ A R
Sbjct: 72 IVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDR 119
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
V+ DRETGRSRGF FVT ++ E+ ++ I+ LDG++ GR +RVN++
Sbjct: 71 VIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYA 116
>gi|389639074|ref|XP_003717170.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Magnaporthe oryzae 70-15]
gi|351642989|gb|EHA50851.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Magnaporthe oryzae 70-15]
gi|440475727|gb|ELQ44390.1| nucleolysin TIA-1 [Magnaporthe oryzae Y34]
gi|440486439|gb|ELQ66302.1| nucleolysin TIA-1 [Magnaporthe oryzae P131]
Length = 479
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 46/136 (33%), Positives = 76/136 (55%), Gaps = 1/136 (0%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD-FKLF 70
+ + + FV + ++ L+GR +RVN++ + ++ F +F
Sbjct: 120 KNAKGYNYGFVEYDDPGAADRAMQTLNGRRVHQSEIRVNWAYQAATSATKEDTSNHFHIF 179
Query: 71 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 130
VG+LS V E LTQAF +G+V ARV++D ++GRSRGYGFV + +++ E AL S++G
Sbjct: 180 VGDLSNEVNDEVLTQAFSVFGSVSEARVMWDMKTGRSRGYGFVAFRDRSDAEKALSSMDG 239
Query: 131 VELEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 240 EWLGSRAIRCNWANQK 255
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 43/183 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 202 VSEARVMWDMKTGRSRGYGFVAFRDRSDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 260
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + +++ +VGNL+ T +
Sbjct: 261 AQQQAMSAVGMTPTTPFGHHHFPTHGMQSYEMVVNQTPAYQTTCYVGNLTPYTTANDVVP 320
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ + A+ LNG + GR ++ S +
Sbjct: 321 LFQNFGYVVESRFQAD------RGFAFIKMDSHENAAQAICGLNGYNVNGRPLKCSWGKD 374
Query: 146 RRS 148
+ S
Sbjct: 375 KNS 377
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y + A+++L
Sbjct: 87 LYVGGLDARVTEDVLRQIFETTGHVQNVKIIPD-KNAKGYNYGFVEYDDPGAADRAMQTL 145
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 146 NGRRVHQSEIRVNWA 160
>gi|119492702|ref|XP_001263670.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
gi|119411830|gb|EAW21773.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
Length = 533
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 82/172 (47%), Gaps = 32/172 (18%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV------------ 49
LS + ++ DR++GRSRGF +V + D E GR + +
Sbjct: 312 LSGVRIVTDRDSGRSRGFGYVEYVSAADAAKAYNAKKDTEIDGRKINLDYATGRPANNNN 371
Query: 50 -------------NFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 96
NF D+ P E+D LFVGN+ +S +S+++ F + G +VG
Sbjct: 372 NNNNQDRAQARARNFGDQASP------ESDT-LFVGNIPFSANEDSVSELFGQSGTIVGI 424
Query: 97 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
R+ D ESGR +G+G+V +S+ E A LNG EL GR +R+ + R S
Sbjct: 425 RLPTDPESGRPKGFGYVQFSSVDEARQAFNDLNGAELNGRPVRLDFSTPRPS 476
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW+V E L Q F+ +G + G R++ D +SGRSRG+G+V Y + A+ A +
Sbjct: 288 LFVGNLSWNVDEEWLRQEFETFGELSGVRIVTDRDSGRSRGFGYVEYVSAADAAKAYNAK 347
Query: 129 NGVELEGRAMRVSLAQGR 146
E++GR + + A GR
Sbjct: 348 KDTEIDGRKINLDYATGR 365
>gi|119495558|ref|XP_001264561.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
gi|119412723|gb|EAW22664.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
Length = 477
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 71/128 (55%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV ++ L+GR +RVN++ + + F +FVG+LS V
Sbjct: 135 YGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSSHFHIFVGDLSNEV 194
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
E L QAF +G+V ARV++D ++GRSRGYGFV + +A+ E AL +++G L RA+
Sbjct: 195 NDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAI 254
Query: 139 RVSLAQGR 146
R + A +
Sbjct: 255 RCNWANQK 262
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + +DG E+LG R +R N+++ K +P +
Sbjct: 209 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDG-EWLGSRAIRCNWANQKGQPSI 267
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 268 SQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVP 327
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
F +G V+ R+ D RG+ F+ T A+ LNG + GR ++ S +
Sbjct: 328 LFHNFGYVLETRLQAD------RGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 381
Query: 146 R 146
R
Sbjct: 382 R 382
Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE-SGRSRGYGFVCYSTKAEMETALES 127
L+VG L VT + L Q F+ G+V +++ D + + YGFV + E A+++
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAAERAMQT 152
Query: 128 LNGVELEGRAMRVSLA 143
LNG + +RV+ A
Sbjct: 153 LNGRRIHQSEIRVNWA 168
>gi|58269652|ref|XP_571982.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228218|gb|AAW44675.1| glycine-rich RNA binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 182
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 54/79 (68%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSW+ T ++L Q F YG V V+ D E+GRSRG+GFV Y + E E A+ +
Sbjct: 5 KVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAA 64
Query: 128 LNGVELEGRAMRVSLAQGR 146
+N EL+GR +RV++A R
Sbjct: 65 MNEQELDGRRVRVNMANSR 83
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
++ V+ DRETGRSRGF FVT + ++ A I ++ +E GR +RVN ++
Sbjct: 30 VTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAAMNEQELDGRRVRVNMAN 81
>gi|169614620|ref|XP_001800726.1| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
gi|160702784|gb|EAT81850.2| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
Length = 506
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Query: 16 SRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGN 73
S+GF FV + L+GR +RVN++ + F +FVG+
Sbjct: 130 SKGFNYGFVEYDDPGAAERGMATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNHFHIFVGD 189
Query: 74 LSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVEL 133
LS V E L QAF +G V ARV++D ++GRSRGYGFV + +A+ E AL S++G L
Sbjct: 190 LSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRADAERALSSMDGEWL 249
Query: 134 EGRAMRVSLAQGR 146
RA+R + A +
Sbjct: 250 GSRAIRCNWANQK 262
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 209 VSEARVMWDMKTGRSRGYGFVAFRDRADAERALSSMDG-EWLGSRAIRCNWANQKGQPSI 267
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + +VGNL+ + L
Sbjct: 268 SQQQAMASMGMTPTTPFGHHHFPTQGVQSYDMVVAQTPQWQTTCYVGNLTPYTSQSDLVP 327
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G V R D RG+ F+ T A+ LNG + GR ++ S +
Sbjct: 328 LFQNFGYVTETRFQSD------RGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 381
Query: 146 R 146
R
Sbjct: 382 R 382
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD----GESGRSRG--YGFVCYSTKAEME 122
L+VG L VT + L Q F+ G+V +++ D S S+G YGFV Y E
Sbjct: 88 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTVSSPSVNSKGFNYGFVEYDDPGAAE 147
Query: 123 TALESLNGVELEGRAMRVSLA 143
+ +LNG + +RV+ A
Sbjct: 148 RGMATLNGRRIHNNEIRVNWA 168
>gi|211906474|gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
Length = 168
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 58/86 (67%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +F+ FVG L+W+ +L +AF +G +V ++++ D E+GRSRG+GFV + + M
Sbjct: 4 ADVEFRCFVGGLAWATDDRALEEAFSAFGEIVESKIINDRETGRSRGFGFVTFRDEKAMR 63
Query: 123 TALESLNGVELEGRAMRVSLAQGRRS 148
A+E +NG L+GR + V+ AQ RRS
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQSRRS 89
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + IE ++G+ GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFRDEKAMRDAIEGMNGQNLDGRNITVN 82
>gi|449297589|gb|EMC93607.1| hypothetical protein BAUCODRAFT_76311, partial [Baudoinia
compniacensis UAMH 10762]
Length = 253
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 16/158 (10%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF---------- 51
L+ ++ DRETG+S+GF FV +V+ +E G E GR +R++F
Sbjct: 27 LASTRIMTDRETGKSKGFGFVEFKSVDGAIKAVEGKQGGEIDGRNVRLDFTEGRSQNNQR 86
Query: 52 ------SDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG 105
SD+ + E LFVGN+S+ + +T+ F EYG++ R+ D ++G
Sbjct: 87 TPQQRSSDRAGKFGDVPKEPSSTLFVGNVSFDANEDMVTEVFSEYGSIKAVRLPTDRDTG 146
Query: 106 RSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
+G+G+V + + + A E+L G E+ GR++R+ +
Sbjct: 147 ALKGFGYVEMFSIDDAKVAFEALQGAEIAGRSIRLDYS 184
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVG LSW+V E L + F+E+G + R++ D E+G+S+G+GFV + + A+E
Sbjct: 3 LFVGGLSWNVDEEWLMREFEEFGELASTRIMTDRETGKSKGFGFVEFKSVDGAIKAVEGK 62
Query: 129 NGVELEGRAMRVSLAQGR 146
G E++GR +R+ +GR
Sbjct: 63 QGGEIDGRNVRLDFTEGR 80
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP 57
DR+TG +GF +V M +++D E L G E GR +R+++S PKP
Sbjct: 142 DRDTGALKGFGYVEMFSIDDAKVAFEALQGAEIAGRSIRLDYS-TPKP 188
>gi|321260943|ref|XP_003195191.1| glycine-rich RNA binding protein [Cryptococcus gattii WM276]
gi|317461664|gb|ADV23404.1| Glycine-rich RNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 177
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 54/79 (68%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSW+ T ++L Q F YG V V+ D E+GRSRG+GFV Y + E E A+ +
Sbjct: 5 KVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAA 64
Query: 128 LNGVELEGRAMRVSLAQGR 146
+N EL+GR +RV++A R
Sbjct: 65 MNEQELDGRRVRVNMANSR 83
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
++ V+ DRETGRSRGF FVT + ++ A I ++ +E GR +RVN ++
Sbjct: 30 VTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAAMNEQELDGRRVRVNMAN 81
>gi|410900506|ref|XP_003963737.1| PREDICTED: nucleolysin TIAR-like isoform 2 [Takifugu rubripes]
Length = 408
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLS 75
S + FV +D + ++ R+ LG+ ++VN++ P + F +FVG+LS
Sbjct: 70 SDPYCFVEFVDHKDAASARATMNKRKILGKEVKVNWATSPSCQKKD-TSNHFHVFVGDLS 128
Query: 76 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 135
+TTE + AF +G++ ARVL D +G+S+GYGFV + K + E A+ + G L+G
Sbjct: 129 PDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQG 188
Query: 136 RAMRVSLA 143
R +R + A
Sbjct: 189 RQIRTNWA 196
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S VL D TG+S+G+ FV+ D I + G+ GR +R N++ + P
Sbjct: 146 ISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPKS 205
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
+ + K ++ G + +T + Q F +G ++ RV D
Sbjct: 206 FQDNGSKHLKFDDIVTQSSPHNCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPD--- 262
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 140
+GY FV +S+ A+ S+NG +EG ++
Sbjct: 263 ---KGYSFVRFSSHDSAAHAIVSVNGTVIEGNLVKC 295
>gi|410900508|ref|XP_003963738.1| PREDICTED: nucleolysin TIAR-like isoform 3 [Takifugu rubripes]
Length = 395
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLS 75
S + FV +D + ++ R+ LG+ ++VN++ P + F +FVG+LS
Sbjct: 46 SDPYCFVEFVDHKDAASARATMNKRKILGKEVKVNWATSPSCQKKD-TSNHFHVFVGDLS 104
Query: 76 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 135
+TTE + AF +G++ ARVL D +G+S+GYGFV + K + E A+ + G L+G
Sbjct: 105 PDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQG 164
Query: 136 RAMRVSLA 143
R +R + A
Sbjct: 165 RQIRTNWA 172
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S VL D TG+S+G+ FV+ D I + G+ GR +R N++ + P
Sbjct: 122 ISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPKS 181
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
+ + K ++ G + +T + Q F +G ++ RV D
Sbjct: 182 FQDNGSKHLKFDDIVTQSSPHNCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPD--- 238
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 140
+GY FV +S+ A+ S+NG +EG ++
Sbjct: 239 ---KGYSFVRFSSHDSAAHAIVSVNGTVIEGNLVKC 271
>gi|346972032|gb|EGY15484.1| nucleolysin TIA-1 [Verticillium dahliae VdLs.17]
Length = 489
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 70/128 (54%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV ++ L+GR +RVN++ + F +FVG+LS V
Sbjct: 138 YGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEV 197
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
E L+QAF +G+V ARV++D ++GRSRGYGFV + + + E AL S++G L RA+
Sbjct: 198 NDEILSQAFAAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAI 257
Query: 139 RVSLAQGR 146
R + A +
Sbjct: 258 RCNWANQK 265
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKP-- 57
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P
Sbjct: 212 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 270
Query: 58 --------------------KLPLYAETDFK------------LFVGNLSWSVTTESLTQ 85
+ P + ++ ++VGNL+ T +
Sbjct: 271 AQQQAMQAMGMTPTTPFGHHQFPAHGMASYEVILAQTPNWQTTVYVGNLTPYTTPNDVVP 330
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ + A+ +NG + GR ++ S +
Sbjct: 331 LFQNFGFVVESRFQAD------RGFAFIKMESHEAAAMAICQMNGYNVNGRPLKCSWGKD 384
Query: 146 R 146
+
Sbjct: 385 K 385
>gi|121701611|ref|XP_001269070.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
gi|119397213|gb|EAW07644.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
Length = 480
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Query: 2 LSKLTVLYDRETGRSRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL 59
+ + V+ D+ S+G+ FV ++ L+GR +RVN++ +
Sbjct: 118 VQSVKVIPDKNKFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQSNTTS 177
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
F +FVG+LS V E L QAF +G+V ARV++D ++GRSRGYGFV + +
Sbjct: 178 KEDTSGHFHIFVGDLSNEVNDEILMQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRG 237
Query: 120 EMETALESLNGVELEGRAMRVSLAQGR 146
+ + AL S++G L RA+R + A +
Sbjct: 238 DADKALNSMDGEWLGSRAIRCNWANQK 264
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + + ++DG E+LG R +R N+++ K +P +
Sbjct: 211 VSEARVMWDMKTGRSRGYGFVAFRDRGDADKALNSMDG-EWLGSRAIRCNWANQKGQPSI 269
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ L
Sbjct: 270 SQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTAQNDLVP 329
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G V+ R+ D RG+ F+ T A+ LNG + GR ++ S +
Sbjct: 330 LFQNFGYVLETRLQAD------RGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 383
Query: 146 R 146
R
Sbjct: 384 R 384
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 126
L+VG L VT + L Q F+ G+V +V+ D S+G YGFV + E A++
Sbjct: 94 LYVGGLDPRVTEDILKQIFETTGHVQSVKVIPDKNKFNSKGYNYGFVEFDDPGAAERAMQ 153
Query: 127 SLNGVELEGRAMRVSLA 143
+LNG + +RV+ A
Sbjct: 154 TLNGRRIHQSEIRVNWA 170
>gi|58269650|ref|XP_571981.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113905|ref|XP_774200.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256835|gb|EAL19553.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228217|gb|AAW44674.1| glycine-rich RNA binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 161
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 54/79 (68%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSW+ T ++L Q F YG V V+ D E+GRSRG+GFV Y + E E A+ +
Sbjct: 5 KVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAA 64
Query: 128 LNGVELEGRAMRVSLAQGR 146
+N EL+GR +RV++A R
Sbjct: 65 MNEQELDGRRVRVNMANSR 83
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD 53
++ V+ DRETGRSRGF FVT + ++ A I ++ +E GR +RVN ++
Sbjct: 30 VTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAAMNEQELDGRRVRVNMAN 81
>gi|421976742|gb|AFX73254.1| glycine rich RNA binding protein 1a [Solanum lycopersicum]
Length = 164
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ AE ++ FVG L+W+ T +L+ AF YG VV ++++ D E+GRSRG+GFV + +
Sbjct: 1 MAAEVEYSCFVGGLAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKS 60
Query: 121 METALESLNGVELEGRAMRVSLAQ 144
M+ A+ +NG EL+GR + V+ AQ
Sbjct: 61 MKDAISGMNGQELDGRNITVNEAQ 84
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + I ++G+E GR + VN
Sbjct: 38 IINDRETGRSRGFGFVTFKDEKSMKDAISGMNGQELDGRNITVN 81
>gi|410900504|ref|XP_003963736.1| PREDICTED: nucleolysin TIAR-like isoform 1 [Takifugu rubripes]
Length = 386
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLS 75
S + FV +D + ++ R+ LG+ ++VN++ P + F +FVG+LS
Sbjct: 48 SDPYCFVEFVDHKDAASARATMNKRKILGKEVKVNWATSPSCQKKD-TSNHFHVFVGDLS 106
Query: 76 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 135
+TTE + AF +G++ ARVL D +G+S+GYGFV + K + E A+ + G L+G
Sbjct: 107 PDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQG 166
Query: 136 RAMRVSLA 143
R +R + A
Sbjct: 167 RQIRTNWA 174
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S VL D TG+S+G+ FV+ D I + G+ GR +R N++ + P
Sbjct: 124 ISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPKS 183
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
+ + K ++ G + +T + Q F +G ++ RV D
Sbjct: 184 FQDNGSKHLKFDDIVTQSSPHNCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPD--- 240
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 140
+GY FV +S+ A+ S+NG +EG ++
Sbjct: 241 ---KGYSFVRFSSHDSAAHAIVSVNGTVIEGNLVKC 273
>gi|327299776|ref|XP_003234581.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
gi|326463475|gb|EGD88928.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
Length = 507
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 15 RSRG--FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVG 72
+S+G + F+ ++ L+GR +RVN++ + + F +FVG
Sbjct: 140 QSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTASKEDTSSHFHIFVG 199
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
+LS V E L QAF G+V ARV++D ++GRSRGYGFV + +A+ E AL S++G
Sbjct: 200 DLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEW 259
Query: 133 LEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 260 LGSRAIRCNWANQK 273
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 220 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 278
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 279 SQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIP 338
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ FV T A+ LNG + GR ++ S +
Sbjct: 339 LFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 392
Query: 146 R 146
R
Sbjct: 393 R 393
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 126
L+VG L VT + L Q F+ G+V +++ D ++ +S+G YGF+ Y E A++
Sbjct: 104 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPD-KNFQSKGLNYGFIEYDDPGAAERAMQ 162
Query: 127 SLNGVELEGRAMRVSLA 143
+LNG + +RV+ A
Sbjct: 163 TLNGRRVHQSEIRVNWA 179
>gi|451997861|gb|EMD90326.1| hypothetical protein COCHEDRAFT_1106708 [Cochliobolus
heterostrophus C5]
Length = 455
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Query: 16 SRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGN 73
S+GF FV + L+GR +RVN++ + F +FVG+
Sbjct: 96 SKGFNYGFVEYDDPGAAERGMATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNHFHIFVGD 155
Query: 74 LSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVEL 133
LS V E L QAF +G V ARV++D ++GRSRGYGFV + +A+ E AL S++G L
Sbjct: 156 LSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRADAERALNSMDGEWL 215
Query: 134 EGRAMRVSLAQGR 146
RA+R + A +
Sbjct: 216 GSRAIRCNWANQK 228
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 175 VSEARVMWDMKTGRSRGYGFVAFRDRADAERALNSMDG-EWLGSRAIRCNWANQKGQPSI 233
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ + L
Sbjct: 234 SQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTSQADLVP 293
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G V R D RG+ F+ T A+ LNG + GR ++ S +
Sbjct: 294 LFQNFGYVTETRFQSD------RGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 347
Query: 146 R 146
R
Sbjct: 348 R 348
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD----GESGRSRG--YGFVCYSTKAEME 122
L+VG L VT + L Q F+ G+V +++ D S S+G YGFV Y E
Sbjct: 54 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGAAE 113
Query: 123 TALESLNGVELEGRAMRVSLA 143
+ +LNG + +RV+ A
Sbjct: 114 RGMATLNGRRIHNNEIRVNWA 134
>gi|326480772|gb|EGE04782.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton equinum CBS 127.97]
Length = 507
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 15 RSRG--FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVG 72
+S+G + F+ ++ L+GR +RVN++ + + F +FVG
Sbjct: 140 QSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTASKEDTSSHFHIFVG 199
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
+LS V E L QAF G+V ARV++D ++GRSRGYGFV + +A+ E AL S++G
Sbjct: 200 DLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEW 259
Query: 133 LEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 260 LGSRAIRCNWANQK 273
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 220 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 278
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 279 SQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIP 338
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ FV T A+ LNG + GR ++ S +
Sbjct: 339 LFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 392
Query: 146 R 146
R
Sbjct: 393 R 393
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 126
L+VG L VT + L Q F+ G+V +++ D ++ +S+G YGF+ Y E A++
Sbjct: 104 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPD-KNFQSKGLNYGFIEYDDPGAAERAMQ 162
Query: 127 SLNGVELEGRAMRVSLA 143
+LNG + +RV+ A
Sbjct: 163 TLNGRRVHQSEIRVNWA 179
>gi|302654241|ref|XP_003018929.1| hypothetical protein TRV_07061 [Trichophyton verrucosum HKI 0517]
gi|291182617|gb|EFE38284.1| hypothetical protein TRV_07061 [Trichophyton verrucosum HKI 0517]
Length = 543
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 15 RSRG--FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVG 72
+S+G + F+ ++ L+GR +RVN++ + + F +FVG
Sbjct: 176 QSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTASKEDTSSHFHIFVG 235
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
+LS V E L QAF G+V ARV++D ++GRSRGYGFV + +A+ E AL S++G
Sbjct: 236 DLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEW 295
Query: 133 LEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 296 LGSRAIRCNWANQK 309
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 256 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 314
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 315 SQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIP 374
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ FV T A+ LNG + GR ++ S +
Sbjct: 375 LFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 428
Query: 146 R 146
R
Sbjct: 429 R 429
>gi|315052890|ref|XP_003175819.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
gi|311341134|gb|EFR00337.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
Length = 506
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 15 RSRG--FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVG 72
+S+G + F+ ++ L+GR +RVN++ + + F +FVG
Sbjct: 139 QSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTASKEDTSSHFHIFVG 198
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
+LS V E L QAF G+V ARV++D ++GRSRGYGFV + +A+ E AL S++G
Sbjct: 199 DLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEW 258
Query: 133 LEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 259 LGSRAIRCNWANQK 272
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 219 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 277
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 278 SQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIP 337
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ FV T A+ LNG + GR ++ S +
Sbjct: 338 LFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 391
Query: 146 R 146
R
Sbjct: 392 R 392
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG---RSRG--YGFVCYSTKAEMET 123
L+VG L VT + L Q F+ G+V +++ D + +S+G YGF+ Y E
Sbjct: 99 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNASAQFQSKGLNYGFIEYDDPGAAER 158
Query: 124 ALESLNGVELEGRAMRVSLA 143
A+++LNG + +RV+ A
Sbjct: 159 AMQTLNGRRVHQSEIRVNWA 178
>gi|302496843|ref|XP_003010422.1| hypothetical protein ARB_03123 [Arthroderma benhamiae CBS 112371]
gi|291173965|gb|EFE29782.1| hypothetical protein ARB_03123 [Arthroderma benhamiae CBS 112371]
Length = 541
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 15 RSRG--FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVG 72
+S+G + F+ ++ L+GR +RVN++ + + F +FVG
Sbjct: 174 QSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTASKEDTSSHFHIFVG 233
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
+LS V E L QAF G+V ARV++D ++GRSRGYGFV + +A+ E AL S++G
Sbjct: 234 DLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEW 293
Query: 133 LEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 294 LGSRAIRCNWANQK 307
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 254 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 312
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 313 SQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIP 372
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ FV T A+ LNG + GR ++ S +
Sbjct: 373 LFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 426
Query: 146 R 146
R
Sbjct: 427 R 427
>gi|451847206|gb|EMD60514.1| hypothetical protein COCSADRAFT_29739 [Cochliobolus sativus ND90Pr]
Length = 506
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Query: 16 SRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGN 73
S+GF FV + L+GR +RVN++ + F +FVG+
Sbjct: 128 SKGFNYGFVEYDDPGAAERGMATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNHFHIFVGD 187
Query: 74 LSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVEL 133
LS V E L QAF +G V ARV++D ++GRSRGYGFV + +A+ E AL S++G L
Sbjct: 188 LSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRADAERALNSMDGEWL 247
Query: 134 EGRAMRVSLAQGR 146
RA+R + A +
Sbjct: 248 GSRAIRCNWANQK 260
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 207 VSEARVMWDMKTGRSRGYGFVAFRDRADAERALNSMDG-EWLGSRAIRCNWANQKGQPSI 265
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ + L
Sbjct: 266 SQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTSQADLVP 325
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G V R D RG+ F+ T A+ LNG + GR ++ S +
Sbjct: 326 LFQNFGYVTETRFQSD------RGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 379
Query: 146 R 146
R
Sbjct: 380 R 380
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD----GESGRSRG--YGFVCYSTKAEME 122
L+VG L VT + L Q F+ G+V +++ D S S+G YGFV Y E
Sbjct: 86 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGAAE 145
Query: 123 TALESLNGVELEGRAMRVSLA 143
+ +LNG + +RV+ A
Sbjct: 146 RGMATLNGRRIHNNEIRVNWA 166
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 58/79 (73%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLF+G +S+S +SL +AF +YG VV AR++ D E+GRSRG+GF+ Y++ E +A+++
Sbjct: 43 KLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQA 102
Query: 128 LNGVELEGRAMRVSLAQGR 146
L+G +L GR +RV+ A R
Sbjct: 103 LDGQDLHGRPIRVNYANER 121
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
++ DRETGRSRGF F+T ++VE+ ++ I+ LDG++ GR +RVN++++ +P+
Sbjct: 73 IIMDRETGRSRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYANE-RPR 123
>gi|384247365|gb|EIE20852.1| hypothetical protein COCSUDRAFT_4708, partial [Coccomyxa
subellipsoidea C-169]
Length = 264
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 77/145 (53%), Gaps = 2/145 (1%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S++ ++ DR TG S G AFV + ++ ++GR + +R+ ++ + +
Sbjct: 31 VSEVRIVKDRATGNSAGSAFVKFEDHQAAAIALKTINGRILYNKEVRIQWAFQKEKTENT 90
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
+ + +FVGNLS V L QAFQ G ARV++D +GRS+G+GFV + TK
Sbjct: 91 ASHS--HIFVGNLSGDVADPVLLQAFQHLGECSDARVMWDHSTGRSKGFGFVSFRTKEAA 148
Query: 122 ETALESLNGVELEGRAMRVSLAQGR 146
E AL ++G ++ +R A +
Sbjct: 149 EKALAEMDGAQVGQWKIRCGWAHHK 173
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 3 SKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPKPKLPL 61
S V++D TGRS+GF FV+ T E + +DG + +R ++ K + L
Sbjct: 121 SDARVMWDHSTGRSKGFGFVSFRTKEAAEKALAEMDGAQVGQWKIRCGWAHHKTEAVTGL 180
Query: 62 YAET-------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
+T + ++VGNL V E L AF YG + G + + G GYGFV
Sbjct: 181 DIDTVDRADPANTNVYVGNLPTEVMEEDLRAAFGAYGEITGLKPCHKG------GYGFVT 234
Query: 115 YSTKAEMETALESLNGVELEGRAMRVS 141
Y + A+ +NG EL+G+ ++ S
Sbjct: 235 YRDHSAAVQAIVGMNGKELKGKMVKCS 261
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNL V L F G V R++ D +G S G FV + AL+++
Sbjct: 7 LYVGNLHPYVNEAVLQDIFSTLGTVSEVRIVKDRATGNSAGSAFVKFEDHQAAAIALKTI 66
Query: 129 NGVELEGRAMRVSLA 143
NG L + +R+ A
Sbjct: 67 NGRILYNKEVRIQWA 81
>gi|146415246|ref|XP_001483593.1| hypothetical protein PGUG_04322 [Meyerozyma guilliermondii ATCC
6260]
Length = 631
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 80/146 (54%), Gaps = 14/146 (9%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP----LYAETDF 67
+ G+SRGF FV E ++ ++ +E G+ L V + K + +L LY T
Sbjct: 274 QEGKSRGFGFVNFENHESALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRL 333
Query: 68 K---------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
+ LFV NL S+ +E L + F+ +G + ARV+ D ++G+S+G+GFVC+S+
Sbjct: 334 EKLLKYQGVNLFVKNLDDSIDSEKLEEEFKPFGTITSARVMVD-DAGKSKGFGFVCFSSP 392
Query: 119 AEMETALESLNGVELEGRAMRVSLAQ 144
E A+ +N ++G+ + V+LAQ
Sbjct: 393 EEATKAITEMNQRMIQGKPLYVALAQ 418
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 10/142 (7%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDG-----RE-YLGRILRVNFSDKPKPKLPLYAET 65
E G+S+ F FV T E A IEN++G RE ++G+ V+ D+ + K
Sbjct: 181 ELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGK--HVSKRDR-ESKFEEMKAN 237
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
++V NL+ V + F+ +G V + D E G+SRG+GFV + A+
Sbjct: 238 FTNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQE-GKSRGFGFVNFENHESALNAV 296
Query: 126 ESLNGVELEGRAMRVSLAQGRR 147
+ +N E++G+ + V AQ +R
Sbjct: 297 KEMNDKEIDGQKLYVGRAQKKR 318
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L+ SV L + F G V RV D + +S GY +V + A+ A+E L
Sbjct: 60 LYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEEL 119
Query: 129 NGVELEGRAMRVSLAQ 144
N ++GR R+ +Q
Sbjct: 120 NYSLVDGRPCRIMWSQ 135
>gi|2226370|gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]
Length = 156
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 58/82 (70%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AE +++ FVG L+W+ T ++L AF +YG ++ ++++ D E+GRSRG+GFV + + M
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGDAFSQYGEILDSKIINDRETGRSRGFGFVTFKDEQAMR 61
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG +L+GR + V+ AQ
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQ 83
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + IE ++G++ GR + VN
Sbjct: 37 IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVN 80
>gi|342882418|gb|EGU83098.1| hypothetical protein FOXB_06359 [Fusarium oxysporum Fo5176]
Length = 113
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 54/76 (71%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG L+W+ T+++L F E+G V A V+ D E+GRSRG+GFV +S++ E A+E+
Sbjct: 3 KLFVGGLAWATTSDTLRAKFSEFGEVTDAIVMTDRETGRSRGFGFVTFSSQEEASAAIEA 62
Query: 128 LNGVELEGRAMRVSLA 143
+N E EGR +RVS A
Sbjct: 63 MNEQEFEGRQIRVSEA 78
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ V+ DRETGRSRGF FVT S+ E+ +A IE ++ +E+ GR +RV+
Sbjct: 28 VTDAIVMTDRETGRSRGFGFVTFSSQEEASAAIEAMNEQEFEGRQIRVS 76
>gi|223590120|sp|A5DM21.2|PABP_PICGU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|190347872|gb|EDK40224.2| hypothetical protein PGUG_04322 [Meyerozyma guilliermondii ATCC
6260]
Length = 631
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 80/146 (54%), Gaps = 14/146 (9%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP----LYAETDF 67
+ G+SRGF FV E ++ ++ +E G+ L V + K + +L LY T
Sbjct: 274 QEGKSRGFGFVNFENHESALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRL 333
Query: 68 K---------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
+ LFV NL S+ +E L + F+ +G + ARV+ D ++G+S+G+GFVC+S+
Sbjct: 334 EKLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGTITSARVMVD-DAGKSKGFGFVCFSSP 392
Query: 119 AEMETALESLNGVELEGRAMRVSLAQ 144
E A+ +N ++G+ + V+LAQ
Sbjct: 393 EEATKAITEMNQRMIQGKPLYVALAQ 418
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE--TDF-K 68
E G+S+ F FV T E A IEN++G R + V + + + E +F
Sbjct: 181 ELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESKFEEMKANFTN 240
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
++V NL+ V + F+ +G V + D E G+SRG+GFV + A++ +
Sbjct: 241 VYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQE-GKSRGFGFVNFENHESALNAVKEM 299
Query: 129 NGVELEGRAMRVSLAQGRR 147
N E++G+ + V AQ +R
Sbjct: 300 NDKEIDGQKLYVGRAQKKR 318
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L+ SV L + F G V RV D + +S GY +V + A+ A+E L
Sbjct: 60 LYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEEL 119
Query: 129 NGVELEGRAMRVSLAQ 144
N ++GR R+ +Q
Sbjct: 120 NYSLVDGRPCRIMWSQ 135
>gi|357462205|ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490432|gb|AES71635.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 135
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 54/76 (71%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LSWSV +SL AF +G+V R++YD +SGR+RG+GFV +S + ++A ++
Sbjct: 37 KLFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSGRARGFGFVIFSNEDAAKSAKDA 96
Query: 128 LNGVELEGRAMRVSLA 143
++G L GR +R++ A
Sbjct: 97 MDGKALLGRPLRINFA 112
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-DKPK 56
++++ ++YD+++GR+RGF FV S + + + +DG+ LGR LR+NF+ +KP+
Sbjct: 62 VTEVRIVYDKDSGRARGFGFVIFSNEDAAKSAKDAMDGKALLGRPLRINFALEKPR 117
>gi|158516903|gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LSW +SL AF +G VV ARV+ D ++G+SRG+GFV +S + + A+ S
Sbjct: 38 KLFVGGLSWGTDDQSLKDAFTSFGEVVEARVITDRDTGKSRGFGFVSFSNGDDAKNAMSS 97
Query: 128 LNGVELEGRAMRVSLAQGR 146
++G ELEGR + V+ A R
Sbjct: 98 MDGQELEGRNIHVNFANER 116
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
V+ DR+TG+SRGF FV+ S +D + ++DG+E GR + VNF+++
Sbjct: 68 VITDRDTGKSRGFGFVSFSNGDDAKNAMSSMDGQELEGRNIHVNFANE 115
>gi|296088109|emb|CBI35498.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 59/79 (74%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+++ F+G LSWS + SL +AF+++G++V A+V+ D SGRSRG+GFV + K ME A+
Sbjct: 6 EYRCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQAMEDAI 65
Query: 126 ESLNGVELEGRAMRVSLAQ 144
+ ++G++L+GR++ V AQ
Sbjct: 66 KEMHGMDLDGRSITVDKAQ 84
>gi|1934994|emb|CAA73034.1| SGRP-1 [Solanum commersonii]
Length = 162
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ AE ++ FVG L+W+ T +L+ AF YG VV ++++ D E+GRSRG+GFV + +
Sbjct: 1 MAAEVEYSCFVGGLAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKS 60
Query: 121 METALESLNGVELEGRAMRVSLAQ 144
M+ A+ +NG EL+GR + V+ AQ
Sbjct: 61 MKEAISGMNGSELDGRNITVNEAQ 84
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + I ++G E GR + VN
Sbjct: 38 IINDRETGRSRGFGFVTFKDEKSMKEAISGMNGSELDGRNITVN 81
>gi|224105391|ref|XP_002313795.1| predicted protein [Populus trichocarpa]
gi|222850203|gb|EEE87750.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 58/82 (70%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AE +++ FVG L+W+ T + L +AF +YG ++ ++++ D E+GRSRG+GFV + + M
Sbjct: 2 AEVEYRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMR 61
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A++ +NG +L+GR + V+ AQ
Sbjct: 62 DAIDGMNGQDLDGRNITVNEAQ 83
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + I+ ++G++ GR + VN
Sbjct: 37 IINDRETGRSRGFGFVTFGNEKAMRDAIDGMNGQDLDGRNITVN 80
>gi|413941709|gb|AFW74358.1| hypothetical protein ZEAMMB73_309849 [Zea mays]
Length = 826
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRIL-------------RVNFSDKPK 56
D E+G SRG A VTM ++ + A I+ LDG + GR + VN +
Sbjct: 675 DAESGISRGTASVTMRSLAEARAAIDALDGFDMDGREVFVKLASDVISNRKNVNLAHITP 734
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
K ++ ET K++VGNL+WSV + L + F + G VV R+L D + GR+R YGF+ +S
Sbjct: 735 TKDHIF-ETPHKVYVGNLAWSVQPQDLRELFTQCGTVVSTRLLTDRKGGRNRVYGFLSFS 793
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGRR 147
+ E+E AL+ L+ GR + V A R
Sbjct: 794 SAQELEEALK-LDRTVFFGRDIVVKEAHVER 823
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 55 PKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
P+P+ +LFV NL + L + F +G V+ + D ESG SRG V
Sbjct: 638 PRPR---------ELFVCNLPRRCDVQDLLELFTPHGTVLSVEISRDAESGISRGTASVT 688
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLA 143
+ AE A+++L+G +++GR + V LA
Sbjct: 689 MRSLAEARAAIDALDGFDMDGREVFVKLA 717
>gi|164424152|ref|XP_962723.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
gi|157070397|gb|EAA33487.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
Length = 480
Score = 82.0 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 70/128 (54%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV ++ L+GR +RVN++ + + F +FVG+LS V
Sbjct: 133 YGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNQNKEDTSGHFHIFVGDLSNEV 192
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
E L QAF +G+V ARV++D ++GRSRGYGFV + + + E AL S++G L RA+
Sbjct: 193 NDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAI 252
Query: 139 RVSLAQGR 146
R + A +
Sbjct: 253 RCNWANQK 260
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 207 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 265
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 266 AQQQAMQQMGLTPTTPYGHHHFPTHGVHSYDMIVAQTPAWQTTCYVGNLTPYTTQNDLVP 325
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ T A+ LNG ++ GR ++ S +
Sbjct: 326 LFQNFGYVVESRFQAD------RGFAFIKMDTHENAAMAICQLNGYQVNGRPLKCSWGKD 379
Query: 146 R 146
+
Sbjct: 380 K 380
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+++L
Sbjct: 93 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPD-KNQKGYNYGFVEYDDPGAAERAMQTL 151
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 152 NGRRVHQSEIRVNWA 166
>gi|302414816|ref|XP_003005240.1| gar2 [Verticillium albo-atrum VaMs.102]
gi|261356309|gb|EEY18737.1| gar2 [Verticillium albo-atrum VaMs.102]
Length = 437
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
+E LFVG+L+W+V + L QAF E+ N+ ARV+ D E GRSRG+G+V +S +
Sbjct: 173 SEQSATLFVGSLAWAVNDDILYQAFSEFPNLTSARVITDREGGRSRGFGYVDFSDAESAK 232
Query: 123 TALESLNGVELEGRAMRVSLAQGRR 147
ALE+ NG ELEGR M + + G+R
Sbjct: 233 AALEAKNGTELEGRNMNIDFS-GKR 256
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 21/165 (12%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF-------SDK 54
L+ V+ DRE GRSRGF +V S E A +E +G E GR + ++F SD
Sbjct: 203 LTSARVITDREGGRSRGFGYVDFSDAESAKAALEAKNGTELEGRNMNIDFSGKRPERSDN 262
Query: 55 PKPKL---------PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG 105
P + L E+D LFVGN+S+ + +++ F R+ D ESG
Sbjct: 263 PGDRANDRAQRHGDSLSPESD-TLFVGNISFEMDQDTVHAFFATVAEPTSVRLPTDPESG 321
Query: 106 RSRGYGFVCYSTKAEMETALESLNGVEL----EGRAMRVSLAQGR 146
+G+G+V +S+ + + AL LNG L GRA+R+ A R
Sbjct: 322 NLKGFGYVSFSSIDDAKKALSELNGQYLGEGSSGRAVRLDYAGQR 366
>gi|356519721|ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 137
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
P +A ++ KLFVG LSWSV +SL +AF +G+V ++YD +SGRSRG+GFV +S +
Sbjct: 32 PSHASSN-KLFVGGLSWSVDHKSLKEAFSSFGDVTEVTIVYDKDSGRSRGFGFVIFSNED 90
Query: 120 EMETALESLNGVELEGRAMRVSLA 143
+ + A ++++G L GR +R++ A
Sbjct: 91 DAKCAKDAMDGKALLGRPLRINFA 114
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
++++T++YD+++GRSRGF FV S +D + +DG+ LGR LR+NF+
Sbjct: 64 VTEVTIVYDKDSGRSRGFGFVIFSNEDDAKCAKDAMDGKALLGRPLRINFA 114
>gi|6911144|gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 59/82 (71%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ FVG L+W+ T +SL++AF +YG ++ ++++ D E+GRSRG+GFV + + M
Sbjct: 4 ADVEYRCFVGGLAWATTDQSLSEAFSQYGEILESKIINDRETGRSRGFGFVTFKDEQSMR 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQTLDGRNITVNEAQ 85
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + IE ++G+ GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFKDEQSMRDAIEGMNGQTLDGRNITVN 82
>gi|226290334|gb|EEH45818.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Paracoccidioides brasiliensis Pb18]
Length = 508
Score = 82.0 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
V YD R A + V N I +L L + +RVN++ +
Sbjct: 129 VEYDDPGAAERAMATLNGRRVHQSNYDIRSLKPHP-LQQEIRVNWAYQSNSNNKEDTSNH 187
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
F +FVG+LS V E L QAF +G+V ARV++D ++GRSRGYGFV + +++ E AL
Sbjct: 188 FHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKALS 247
Query: 127 SLNGVELEGRAMRVSLAQGR 146
S++G L RA+R + A +
Sbjct: 248 SMDGEWLGSRAIRCNWANQK 267
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 214 VSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 272
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 273 SQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVP 332
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ FV T A+ L+G + GR ++ S +
Sbjct: 333 LFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKD 386
Query: 146 R 146
R
Sbjct: 387 R 387
>gi|45198625|ref|NP_985654.1| AFR107Wp [Ashbya gossypii ATCC 10895]
gi|44984635|gb|AAS53478.1| AFR107Wp [Ashbya gossypii ATCC 10895]
gi|374108884|gb|AEY97790.1| FAFR107Wp [Ashbya gossypii FDAG1]
Length = 396
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 10/150 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP------ 60
V+Y+R T +SRG+ +V V ++ + G+E GR + + S P
Sbjct: 198 VIYERGTDKSRGYGYVDFEDVSYAEKAVKEMHGKEIDGRAINCDMSTSKPASAPREDRAK 257
Query: 61 LYAETDFK----LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
Y +T + LF+GNLS++ ++L + F ++GNV+ R+ ES + +G+G+V Y
Sbjct: 258 KYGDTPSQPSDTLFLGNLSFNADRDALFELFSKHGNVISVRIPTHPESNQPKGFGYVQYG 317
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ E + AL++L G ++ R +R+ + R
Sbjct: 318 SVEEAQAALDALQGEYIDNRPVRIDFSSPR 347
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG LSWSV E L F G VVGARV+Y+ + +SRGYG+V + + E A++ +
Sbjct: 169 IFVGRLSWSVDDEWLKTEFDHIGGVVGARVIYERGTDKSRGYGYVDFEDVSYAEKAVKEM 228
Query: 129 NGVELEGRAMRVSLAQGR 146
+G E++GRA+ ++ +
Sbjct: 229 HGKEIDGRAINCDMSTSK 246
>gi|383760540|ref|YP_005439526.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
gi|381381210|dbj|BAL98027.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
Length = 161
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 57/79 (72%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGNL++SV +SL QAF ++G V A+V+ D E+GRS+G+GFV + AE + A+
Sbjct: 4 KLYVGNLAYSVRDDSLQQAFAQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAAING 63
Query: 128 LNGVELEGRAMRVSLAQGR 146
+NG LEGRA+ V+ A+ R
Sbjct: 64 MNGQPLEGRAIVVNEARPR 82
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ V+ DRETGRS+GF FV M + + A I ++G+ GR + VN
Sbjct: 29 VTSAKVMMDRETGRSKGFGFVEMGSDAEAQAAINGMNGQPLEGRAIVVN 77
>gi|351725255|ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 56/79 (70%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLF+G LS+ V +SL AF +G+VV A+V+ D +SGRSRG+GFV +S +AL +
Sbjct: 37 KLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSA 96
Query: 128 LNGVELEGRAMRVSLAQGR 146
++G +L+GR++RVS A R
Sbjct: 97 MDGKDLDGRSIRVSYANDR 115
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-DKP 55
V+ DR++GRSRGF FV S E ++ + +DG++ GR +RV+++ D+P
Sbjct: 67 VITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLDGRSIRVSYANDRP 116
>gi|347839348|emb|CCD53920.1| similar to nuclear and cytoplasmic polyadenylated RNA-binding
protein pub1 [Botryotinia fuckeliana]
Length = 506
Score = 81.6 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 4/149 (2%)
Query: 2 LSKLTVLYDRETG--RSRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP 57
+ + ++ D+ G +S+GF FV ++ L+GR +RVN++ +
Sbjct: 115 VQNVKIIPDKNVGAVQSKGFNYGFVEYDDPGAAERAMQTLNGRRVHQAEIRVNWAYQSNT 174
Query: 58 KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
F +FVG+LS V E L QAF +G+V ARV++D ++GRSRGYGF +
Sbjct: 175 SNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFAAFRE 234
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQGR 146
+ + E AL S++G L RA+R + A +
Sbjct: 235 RQDAEKALSSMDGEWLGSRAIRCNWANQK 263
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ F +D + ++DG E+LG R +R N+++ K +P +
Sbjct: 210 VSEARVMWDMKTGRSRGYGFAAFRERQDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 268
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T + L
Sbjct: 269 SQQQAMSAMGMTPTTPFGHHHFPTHGVQSYDMIVQQTPQWQTTCYVGNLTPYTTQQDLVP 328
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ FV + A+ L+G + GR ++ S +
Sbjct: 329 LFQNFGYVVETRFQSD------RGFAFVKMDSHENAALAICQLSGYNVNGRPLKCSWGKD 382
Query: 146 R 146
+
Sbjct: 383 K 383
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG--RSRG--YGFVCYSTKAEMETA 124
L+VG L VT E L Q F+ G+V +++ D G +S+G YGFV Y E A
Sbjct: 91 LYVGGLDPRVTEEILRQIFETTGHVQNVKIIPDKNVGAVQSKGFNYGFVEYDDPGAAERA 150
Query: 125 LESLNGVELEGRAMRVSLA 143
+++LNG + +RV+ A
Sbjct: 151 MQTLNGRRVHQAEIRVNWA 169
>gi|345571041|gb|EGX53856.1| hypothetical protein AOL_s00004g515 [Arthrobotrys oligospora ATCC
24927]
Length = 496
Score = 81.6 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 44/128 (34%), Positives = 69/128 (53%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV ++ L+GR +RVN++ + F +FVG+LS V
Sbjct: 120 YGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSSQAAKEDTSHHFHIFVGDLSNEV 179
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
E L QAF +G + ARV++D ++GRSRGYGFV Y +++ E AL +++G L RA+
Sbjct: 180 NDELLQQAFTTFGTISEARVMWDMKTGRSRGYGFVAYRERSDAEKALSAMDGEWLGSRAI 239
Query: 139 RVSLAQGR 146
R + A +
Sbjct: 240 RCNWANQK 247
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + +DG E+LG R +R N+++ K +P +
Sbjct: 194 ISEARVMWDMKTGRSRGYGFVAYRERSDAEKALSAMDG-EWLGSRAIRCNWANQKGQPSI 252
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 253 SQQSQMAQMGMTPTTPFGHHHFPTHGIQSYDMIVQQTPQWQTTVYVGNLTPYTTQNDLLP 312
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G +V R D RG+ F+ T A+ L+G + GR ++ S +
Sbjct: 313 LFQNFGYIVETRFQAD------RGFAFIKMDTHENAAMAICQLSGYNVNGRPLKCSWGKD 366
Query: 146 R 146
R
Sbjct: 367 R 367
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+VV +++ D ++ + YGFV Y E A+++L
Sbjct: 80 LYVGGLDPRVTDDILRQIFETTGHVVSVKIIPD-KNAKGFNYGFVEYDDPGAAERAMQTL 138
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 139 NGRRVHQSEIRVNWA 153
>gi|118489085|gb|ABK96349.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 171
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 59/84 (70%)
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ AE +++ FVG L+W+ T + L +AF +YG ++ ++++ D E+GRSRG+GFV + +
Sbjct: 1 MSAEVEYRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKA 60
Query: 121 METALESLNGVELEGRAMRVSLAQ 144
M A++ +NG +L+GR + V+ AQ
Sbjct: 61 MRDAIDGMNGQDLDGRNITVNEAQ 84
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + I+ ++G++ GR + VN
Sbjct: 38 IINDRETGRSRGFGFVTFGNEKAMRDAIDGMNGQDLDGRNITVN 81
>gi|118481677|gb|ABK92779.1| unknown [Populus trichocarpa]
gi|118481702|gb|ABK92791.1| unknown [Populus trichocarpa]
gi|118482754|gb|ABK93295.1| unknown [Populus trichocarpa]
gi|118483202|gb|ABK93505.1| unknown [Populus trichocarpa]
Length = 170
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 59/84 (70%)
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ AE +++ FVG L+W+ T + L +AF +YG ++ ++++ D E+GRSRG+GFV + +
Sbjct: 1 MSAEVEYRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKA 60
Query: 121 METALESLNGVELEGRAMRVSLAQ 144
M A++ +NG +L+GR + V+ AQ
Sbjct: 61 MRDAIDGMNGQDLDGRNITVNEAQ 84
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + I+ ++G++ GR + VN
Sbjct: 38 IINDRETGRSRGFGFVTFGNEKAMRDAIDGMNGQDLDGRNITVN 81
>gi|441613453|ref|XP_004088139.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 638
Score = 81.6 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 19/148 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI---------LRVNFSDKPK 56
++G+S+GF FV+ ED ++ ++G+E Y+GR L+ F +
Sbjct: 226 QSGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKCKFEQMKQ 285
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL ++ E L +AF +G + A+V+ +G GRS+G+GFVC+S
Sbjct: 286 DRITRYQVVN--LYVKNLDDAIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVATKPLYVALAQ 369
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T S +A+V +D ++ ++ G+ LR+ +S + P L
Sbjct: 40 IRVCRDVITPHSSNYAYVNFQHPKDAEHALDTMNFDVIKGKPLRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +FV NL S+ ++L +GNV+ +V+ D E+G S+GYGFV + T+ E A
Sbjct: 99 GN--IFVKNLDKSINNKALYDTVSAFGNVLSCKVVCD-ENG-SKGYGFVHFETREAAERA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGIPLNDRKVFVGRFKSRK 177
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P P Y L+VG+L VT L + F G ++ RV D + S Y +V +
Sbjct: 3 PSTPSYPTA--SLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITPHSSNYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E AL+++N ++G+ +R+ +Q
Sbjct: 61 HPKDAEHALDTMNFDVIKGKPLRIMWSQ 88
>gi|229595173|ref|XP_001019281.3| nucleolar phosphoprotein, putative [Tetrahymena thermophila]
gi|1262277|gb|AAA96781.1| nucleolar phosphoprotein [Tetrahymena thermophila]
gi|225566349|gb|EAR99036.3| nucleolar phosphoprotein, putative [Tetrahymena thermophila SB210]
Length = 476
Score = 81.6 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 8/142 (5%)
Query: 8 LYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD- 66
L E GRS+G AFV+ T E CN +E + E++GR L + KPK + P + D
Sbjct: 295 LLKNEQGRSKGIAFVSFETEEGCNKAVE-MSNSEFMGRYLIIE-KTKPKTERPAHLPVDE 352
Query: 67 --FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+FVGNLS+ E+L + F G V AR+ G+SRG+G V + ++ +E A
Sbjct: 353 DSKTIFVGNLSFRTDKETLKKFFASCGKVADARIAE--ADGKSRGFGHVEFEERSGVENA 410
Query: 125 LESLNGVELEGRAMRVSLAQGR 146
L+ + G +++GR ++V +A R
Sbjct: 411 LKKV-GEQIDGRPIKVDVAASR 431
>gi|225682885|gb|EEH21169.1| nucleolysin TIA-1 [Paracoccidioides brasiliensis Pb03]
Length = 471
Score = 81.6 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 69/128 (53%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV + L+GR +RVN++ + F +FVG+LS V
Sbjct: 142 YGFVEYDDPGAAERAMATLNGRRVHQSEIRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEV 201
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
E L QAF +G+V ARV++D ++GRSRGYGFV + +++ E AL S++G L RA+
Sbjct: 202 NDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAI 261
Query: 139 RVSLAQGR 146
R + A +
Sbjct: 262 RCNWANQK 269
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 216 VSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 274
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 275 SQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVP 334
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ FV T A+ L+G + GR ++ S +
Sbjct: 335 LFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKD 388
Query: 146 R 146
R
Sbjct: 389 R 389
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+V +++ D S + YGFV Y E A+ +L
Sbjct: 102 LYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNS-KGLNYGFVEYDDPGAAERAMATL 160
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 161 NGRRVHQSEIRVNWA 175
>gi|126342328|ref|XP_001373103.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 942
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 26/161 (16%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V+ D E+G+S+GF FV+ ED ++ ++G+E+ G+ + V + K + +
Sbjct: 525 VKVMTD-ESGKSKGFGFVSYEKHEDAQRAVDEMNGKEFNGKRIYVGRAQKKGER-----Q 578
Query: 65 TDFK------------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR 106
T+ K L+V NL S+ E L +AF +G + A+V+ +G G
Sbjct: 579 TELKRHFEQVKQERSSRYQGVNLYVKNLDDSIDDERLRKAFSPFGTITSAKVMMEG--GH 636
Query: 107 SRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRR 147
SRG+GFVC+S E A+ +NG + + + V+LAQ +R
Sbjct: 637 SRGFGFVCFSAPEEAAKAVSEMNGKLVATKPLYVALAQRKR 677
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V + D V+E ++ G+ +R+ +S + P L
Sbjct: 345 IRVCRDMLTRRSLGYAYVNFQQLADAERVLETMNLDVIKGKPVRIMWSQR-DPSL--RKS 401
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+F+ NL S+ ++L + F +GN++ +V+ D E+G S+GYGFV + + + A
Sbjct: 402 GVGNIFIKNLEKSIDNKALYKTFSAFGNILSCKVISD-ENG-SKGYGFVHFENQQAADKA 459
Query: 125 LESLNGVEL 133
+E +NGV L
Sbjct: 460 IEKMNGVRL 468
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G ++ RV D + RS GY +V + A+ E LE++
Sbjct: 318 LYVGDLHHDVTEAMLYEKFSPAGPILSIRVCRDMLTRRSLGYAYVNFQQLADAERVLETM 377
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 378 NLDVIKGKPVRIMWSQ 393
>gi|384251873|gb|EIE25350.1| polyadenylate binding protein [Coccomyxa subellipsoidea C-169]
Length = 681
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 19/161 (11%)
Query: 1 MLSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI-------- 46
M++ ++ D E G+S+GF F+ E +A + L+G+E Y GR
Sbjct: 238 MVTSFAIMKD-EAGKSKGFGFINFEDAEGAHAAVTALNGKEIDGKELYCGRAQKKAEREA 296
Query: 47 -LRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG 105
L+ F + + ++ Y L+V NL V + L F +G + A+V+ D +G
Sbjct: 297 ELKQKFDEVRQERIAKY--QGMNLYVKNLVDEVDDDQLRAEFAPHGTITSAKVMKD-SAG 353
Query: 106 RSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+S+G+GFVCYS+ E A+ +NG L G+ M V+LAQ R
Sbjct: 354 KSKGFGFVCYSSPEEATRAVTEMNGKMLLGKPMYVALAQRR 394
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 3/134 (2%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDF-KLFVG 72
G S+G+ FV E IE ++G G+ + V K + + P+ E + +FV
Sbjct: 160 GNSKGYGFVHYEKEEAAQLAIEKVNGMLLEGKKVFVGPFLK-RTERPVDKEQHYTNVFVK 218
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
NLS ++T E + + F E+G V ++ D E+G+S+G+GF+ + A+ +LNG E
Sbjct: 219 NLSENLTDEEVEKMFNEHGMVTSFAIMKD-EAGKSKGFGFINFEDAEGAHAAVTALNGKE 277
Query: 133 LEGRAMRVSLAQGR 146
++G+ + AQ +
Sbjct: 278 IDGKELYCGRAQKK 291
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + V D T RS G+A+V ++ D A ++ Y I + KP +
Sbjct: 50 VASIRVCRDAVTRRSLGYAYVNYNSALDAAAAERAIEALNYTSVIPGKEGGEDSKPMRIM 109
Query: 62 YAETD--FK------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
++ D F+ +F+ NL + ++L F +G ++ +V D +G S+GYGFV
Sbjct: 110 WSHRDPAFRKSGVGNIFIKNLDKDIDNKALHDTFTAFGTILSCKVATD-LAGNSKGYGFV 168
Query: 114 CYSTKAEMETALESLNGVELEGRAMRV 140
Y + + A+E +NG+ LEG+ + V
Sbjct: 169 HYEKEEAAQLAIEKVNGMLLEGKKVFV 195
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
L+VG+L VT L + F + G V RV D + RS GY +V Y++
Sbjct: 26 LYVGDLDRDVTEAQLFEIFSQIGPVASIRVCRDAVTRRSLGYAYVNYNS 74
>gi|348542282|ref|XP_003458614.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oreochromis
niloticus]
Length = 386
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+T + FV A I ++GR+ LG+ ++VN++ P + + F +FV
Sbjct: 41 DTAGHDPYCFVEFYEHRHATATIAAMNGRKILGKEVKVNWATTPTSQKKD-TSSHFHVFV 99
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS +TT+ + AF +G + RV+ D +G+S+GYGFV + K + E A++ + G
Sbjct: 100 GDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 159
Query: 132 ELEGRAMRVSLA 143
L GR +R + A
Sbjct: 160 WLGGRQIRTNWA 171
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPKPK-- 58
+S V+ D TG+S+G+ FV+ D I+ + G+ GR +R N++ KP PK
Sbjct: 121 ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT 180
Query: 59 --------------LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
+ + ++ ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 181 SETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPE--- 237
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +++ A+ S+NG +EG ++
Sbjct: 238 ---KGYSFVRFNSHEAAAHAIVSVNGTSIEGYVVK 269
>gi|7024451|dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +F+ FVG L+W+ T SL +AF YG+++ ++++ D E+GRSRG+GFV + + M
Sbjct: 4 ADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMR 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + IE ++G+ GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVN 82
>gi|296815788|ref|XP_002848231.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
gi|238841256|gb|EEQ30918.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
Length = 507
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Query: 15 RSRG--FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVG 72
+S+G + F+ ++ L+GR +RVN++ + F +FVG
Sbjct: 140 QSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTASKEDTSNHFHIFVG 199
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
+LS V E L QAF G+V ARV++D ++GRSRGYGFV + +A+ E AL S++G
Sbjct: 200 DLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEW 259
Query: 133 LEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 260 LGSRAIRCNWANQK 273
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 220 VSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 278
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 279 SQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIP 338
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ FV T A+ LNG + GR ++ S +
Sbjct: 339 LFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 392
Query: 146 R 146
R
Sbjct: 393 R 393
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 126
L+VG L VT + L Q F+ G+V +++ D ++ +S+G YGF+ Y E A++
Sbjct: 104 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPD-KNFQSKGLNYGFIEYDDPGAAERAMQ 162
Query: 127 SLNGVELEGRAMRVSLA 143
+LNG + +RV+ A
Sbjct: 163 TLNGRRVHQSEIRVNWA 179
>gi|469072|dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana sylvestris]
Length = 165
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 58/82 (70%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AE +++ FVG L+W+ T +L +AF +YG V+ ++++ D E+GRSRG+GFV + + M
Sbjct: 2 AEVEYRCFVGGLAWATTDRTLGEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMR 61
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG +L+GR + V+ AQ
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQ 83
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + IE ++G++ GR + VN
Sbjct: 37 IINDRETGRSRGFGFVTFGDEKSMRDAIEGMNGQDLDGRNITVN 80
>gi|341893520|gb|EGT49455.1| CBN-TIAR-2 protein [Caenorhabditis brenneri]
Length = 420
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 82/146 (56%), Gaps = 5/146 (3%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++K +++D + G + +AF+ S +++++GR+ L R LRVN++ +P
Sbjct: 64 VTKAKIIFDFQ-GLADPYAFIEFSDHNQAAQALQSMNGRQLLDRELRVNWAVEPNQPGDS 122
Query: 62 YAETD----FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
+ D F +FVG+LS + + L +AF +G V A+++ D + +++GYGFV Y
Sbjct: 123 SRKMDYSRHFHVFVGDLSSEIDSTKLKEAFLPFGEVSEAKIIRDTTTNKAKGYGFVSYPR 182
Query: 118 KAEMETALESLNGVELEGRAMRVSLA 143
+ + E A+E +NG L R +R + A
Sbjct: 183 REDAERAIEQMNGQWLGRRTIRTNWA 208
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 39 GREYLGRILRVN--FSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 96
G +++G RV+ ++K +L +E LFVGNL +VT E + F + G V A
Sbjct: 8 GDDFVGYNPRVHARVAEKEGYQLASGSEDPRTLFVGNLDPAVTDEFIATLFNQMGAVTKA 67
Query: 97 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
++++D + G + Y F+ +S + AL+S+NG +L R +RV+ A
Sbjct: 68 KIIFDFQ-GLADPYAFIEFSDHNQAAQALQSMNGRQLLDRELRVNWA 113
>gi|448520030|ref|XP_003868205.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis Co 90-125]
gi|380352544|emb|CCG22770.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis]
Length = 498
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-----------DKP 55
V+ +R TG+SRG+ +V S+ I + G+E GR + ++ S D+
Sbjct: 286 VIMERATGKSRGYGYVDFSSKSAAENAIAEMQGKEIDGRPINLDLSTGKPHATKSNNDRA 345
Query: 56 KPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
+ + LF+GNLS++ + L + F EYGNV+ R+ ++ + +G+G+V +
Sbjct: 346 RQFGDQQSPPSDTLFIGNLSFNANRDKLFEVFGEYGNVISCRLPTHPDTQQPKGFGYVQF 405
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQGR 146
S+ E + ALE+LNG LEGR R+ + R
Sbjct: 406 SSVDEAKAALEALNGEYLEGRPCRLDFSAPR 436
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 51/78 (65%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+F G LSW++ + L + F+ V+ ARV+ + +G+SRGYG+V +S+K+ E A+ +
Sbjct: 257 IFAGRLSWNIDDDWLKREFEHLEGVISARVIMERATGKSRGYGYVDFSSKSAAENAIAEM 316
Query: 129 NGVELEGRAMRVSLAQGR 146
G E++GR + + L+ G+
Sbjct: 317 QGKEIDGRPINLDLSTGK 334
>gi|302507033|ref|XP_003015473.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
gi|291179045|gb|EFE34833.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/162 (31%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-------K 54
L+ ++ DRE+GRSRGF +V VED E GR + +++++
Sbjct: 264 LAGTRIVTDRESGRSRGFGYVEFVNVEDAVKAHTAKKDAELDGRKMNLDYANARTNGNAN 323
Query: 55 PKPKLPLYA---------ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG 105
P+ + A E+D LF+GN+S+S + + F +YG + G R+ D ESG
Sbjct: 324 PRERADNRAKSFGDQTSPESD-TLFIGNISFSADENMVQELFSKYGAIQGIRLPTDPESG 382
Query: 106 RSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRR 147
R +G+G+V +S+ E ALE+ +G +L GR++R+ + R+
Sbjct: 383 RPKGFGYVQFSSVDEARAALEAEHGADLGGRSIRLDFSTPRQ 424
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 52 SDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
+ K K +P A + LFVGNLSW+V E L F+E+G + G R++ D ESGRSRG+G
Sbjct: 225 AKKAKVDVPEGASAN--LFVGNLSWNVDEEWLRSEFEEFGELAGTRIVTDRESGRSRGFG 282
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+V + + A + EL+GR M + A R
Sbjct: 283 YVEFVNVEDAVKAHTAKKDAELDGRKMNLDYANAR 317
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP 57
D E+GR +GF +V S+V++ A +E G + GR +R++FS +P
Sbjct: 378 DPESGRPKGFGYVQFSSVDEARAALEAEHGADLGGRSIRLDFSTPRQP 425
>gi|82623423|gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum tuberosum]
Length = 178
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 58/82 (70%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
+ +++ FVG L+W+ T +L++AF +YG VV ++++ D E+GRSRG+GFV + + M
Sbjct: 2 GDVEYRCFVGGLAWATTDNTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMR 61
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG +L+GR + V+ AQ
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQ 83
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + IE ++G++ GR + VN
Sbjct: 37 IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVN 80
>gi|1262583|dbj|BAA02244.1| polyadenylate binding protein II [Homo sapiens]
Length = 193
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 38 NGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQL 94
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 95 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 152
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 153 SPEEATKAVTEMNGRIVGSKPLYVALAQ 180
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+++ N V ESL + F ++G + +V+ D +G+S+G+GFV Y + A+E +
Sbjct: 4 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEM 62
Query: 129 NGVELEGRAMRVSLAQGR 146
NG E+ G+ + V AQ +
Sbjct: 63 NGKEISGKIIFVGRAQKK 80
>gi|432884715|ref|XP_004074554.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+T + FV A I ++GR+ LG+ ++VN++ P + + F +FV
Sbjct: 41 DTAGHDPYCFVEFYEHRHATATIAAMNGRKILGKEVKVNWATTPTSQKKD-TSSHFHVFV 99
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS +TT+ + AF +G + RV+ D +G+S+GYGFV + K + E A++ + G
Sbjct: 100 GDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 159
Query: 132 ELEGRAMRVSLA 143
L GR +R + A
Sbjct: 160 WLGGRQIRTNWA 171
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPKPK-- 58
+S V+ D TG+S+G+ FV+ D I+ + G+ GR +R N++ KP PK
Sbjct: 121 ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT 180
Query: 59 --------------LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
+ + ++ ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 181 NESSSSKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPE--- 237
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +++ A+ S+NG +EG ++
Sbjct: 238 ---KGYSFVRFNSHEAAAHAIVSVNGTSIEGYVVK 269
>gi|6911146|gb|AAF31404.1|AF200323_1 putative glycine-rich RNA-binding protein 2 [Catharanthus roseus]
Length = 160
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 59/82 (71%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +F+ FVG L+W+ T +SL++AF +YG V+ ++V+ D E+GRSRG+GFV + + M+
Sbjct: 4 ADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKVINDRETGRSRGFGFVTFGDEKSMK 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+ +NG L+GR + V+ AQ
Sbjct: 64 DAIVGMNGQTLDGRNITVNEAQ 85
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
V+ DRETGRSRGF FVT + I ++G+ GR + VN
Sbjct: 39 VINDRETGRSRGFGFVTFGDEKSMKDAIVGMNGQTLDGRNITVN 82
>gi|357128483|ref|XP_003565902.1| PREDICTED: uncharacterized protein LOC100828680 [Brachypodium
distachyon]
Length = 357
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 8/121 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
+LYDRETG+SRG+ +VTMSTVE+ + RE G+++ V + + P+
Sbjct: 238 ILYDRETGQSRGYGYVTMSTVEEAEMAVNTFHRRELYGKLMTVEMRSPHQHRSPV----- 292
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG--RSRGYGFVCYSTKAEMETA 124
++FVGNL V L F E+G VV +V Y G RSR +GFV +T+ E + A
Sbjct: 293 -RIFVGNLPCEVDGSMLNLLFSEHGQVVDTKVAYGYVKGVWRSRRFGFVTMATREESDDA 351
Query: 125 L 125
+
Sbjct: 352 I 352
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNL + E L Q F+ G V + +LYD E+G+SRGYG+V ST E E A+ +
Sbjct: 209 LYVGNLRHHIDDEYLAQLFENVGIVEFSEILYDRETGQSRGYGYVTMSTVEEAEMAVNTF 268
Query: 129 NGVELEGRAMRVSL 142
+ EL G+ M V +
Sbjct: 269 HRRELYGKLMTVEM 282
>gi|402225922|gb|EJU05982.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 541
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 23/156 (14%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN---------------F 51
V DR++GRSRGF F+ ST + +E + G+E GR + V+ F
Sbjct: 319 VQLDRQSGRSRGFGFIDFSTSDAVAKALETMQGKEVDGRAIAVDKTESNPRNTQARAAKF 378
Query: 52 SDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
D P +E +FVGN+++S ++L Q F +YG V R+ D E+G+ +G+
Sbjct: 379 GDTP-------SEPSQTIFVGNVAFSADEDALWQTFADYGAVRSVRLPTDRETGQPKGFA 431
Query: 112 FVCYSTKAEMETALES-LNGVELEGRAMRVSLAQGR 146
+V + +A A E+ G+E+ GR +R+ +Q R
Sbjct: 432 YVEFEDQAGATAAFEAGKEGLEIGGRPVRLDYSQPR 467
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+ V NLSW+V + L F+E G +V RV D +SGRSRG+GF+ +ST + ALE++
Sbjct: 290 IIVKNLSWNVDDDWLKTEFEECGEIVSVRVQLDRQSGRSRGFGFIDFSTSDAVAKALETM 349
Query: 129 NGVELEGRAMRV 140
G E++GRA+ V
Sbjct: 350 QGKEVDGRAIAV 361
>gi|326472146|gb|EGD96155.1| nucleolin protein Nsr1 [Trichophyton tonsurans CBS 112818]
Length = 479
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 29/168 (17%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN----------- 50
LS ++ DRE+GRSRGF +V VED E GR + ++
Sbjct: 264 LSGTRIVTDRESGRSRGFGYVEFVNVEDAVKAHGAKKDAELDGRKMNLDYANARANGNAN 323
Query: 51 -----------FSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVL 99
F D+ P E+D LF+GN+S+S + + F +YG + G R+
Sbjct: 324 PRERADNRAKSFGDQTSP------ESDT-LFIGNISFSADENMVQELFSKYGTIQGIRLP 376
Query: 100 YDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRR 147
D +SGR +G+G+V +S+ E ALE+ +G +L GR++R+ + ++
Sbjct: 377 TDPDSGRPKGFGYVQFSSVDEARAALEAEHGADLGGRSIRLDFSTPKQ 424
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW+V E L F+E+G + G R++ D ESGRSRG+G+V + + A +
Sbjct: 240 LFVGNLSWNVDEEWLRSEFEEFGELSGTRIVTDRESGRSRGFGYVEFVNVEDAVKAHGAK 299
Query: 129 NGVELEGRAM 138
EL+GR M
Sbjct: 300 KDAELDGRKM 309
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
D ++GR +GF +V S+V++ A +E G + GR +R++FS PK P
Sbjct: 378 DPDSGRPKGFGYVQFSSVDEARAALEAEHGADLGGRSIRLDFST---PKQP 425
>gi|34851124|gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
Length = 178
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 57/82 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AE +F+ FVG L+W+ ++L +AF +G ++ ++++ D E+GRSRG+GFV +S + M
Sbjct: 4 AEIEFRCFVGGLAWATDNDALERAFSPFGEIIESKIINDRETGRSRGFGFVTFSNEKAMR 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT S + IE ++G+ GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFSNEKAMRDAIEGMNGQNLDGRNITVN 82
>gi|444706907|gb|ELW48224.1| Polyadenylate-binding protein 4 [Tupaia chinensis]
Length = 692
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
TG+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 TGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D +G+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PTGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKVIFVGRAQKK 269
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|47228429|emb|CAG05249.1| unnamed protein product [Tetraodon nigroviridis]
Length = 411
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV A I ++GR+ LG+ ++VN++ P + + F +FVG+LS +
Sbjct: 39 YCFVEFYEHRHATATIAAMNGRKILGKEVKVNWATTPTSQKK-DTSSHFHVFVGDLSPEI 97
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TT+ + AF +G + RV+ D +G+S+GYGFV + K + E A++ + G L GR +
Sbjct: 98 TTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 157
Query: 139 RVSLA 143
R + A
Sbjct: 158 RTNWA 162
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPKPK-- 58
+S V+ D TG+S+G+ FV+ D I+ + G+ GR +R N++ KP PK
Sbjct: 112 ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT 171
Query: 59 --------------LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
+ + ++ ++ G ++ +T + + Q F +G+++ RV D
Sbjct: 172 NETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGHIMEIRVFPD--- 228
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 140
+GY FV +++ A+ S+NG +EG ++
Sbjct: 229 ---KGYSFVRFNSHEAAAHAIVSVNGTTIEGYVVKC 261
>gi|226469236|emb|CAX70097.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 463
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 10/144 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK------PKLP 60
++ D +T RS+G A+V VE + L G LG +++ S K P LP
Sbjct: 135 LIMDNKTKRSKGIAYVEFREVESAQLAL-GLTGTRLLGVPIQIQQSHAEKNRVSATPSLP 193
Query: 61 LYAETD---FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
++ + KL++G+L +++T E L F+ +G + +++ D + RS+GYGFV Y
Sbjct: 194 RPSQQNKGPMKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFVTYVN 253
Query: 118 KAEMETALESLNGVELEGRAMRVS 141
+ + AL+ LNG EL GR M+V+
Sbjct: 254 SDDAKKALDQLNGFELAGRPMKVN 277
Score = 37.4 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
+ + ++ D T RS+G+ FVT +D ++ L+G E GR ++VN
Sbjct: 229 IEDIKLIKDPATNRSQGYGFVTYVNSDDAKKALDQLNGFELAGRPMKVN 277
>gi|242822492|ref|XP_002487897.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
gi|218712818|gb|EED12243.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
Length = 479
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 15/160 (9%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK------- 54
LS + ++ +RE+GRSRGF +V + A E E GR + ++++
Sbjct: 257 LSGVRIMTERESGRSRGFGYVEYADASSAKAAYEAKKDAEIDGRTINLDYAKPRDANNQA 316
Query: 55 PKPKLPLYAET--------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR 106
P+ K A + LFVGNL + V ++ + F+ G + G R+ D E+GR
Sbjct: 317 PREKAQNRARSFGDQTSPESNTLFVGNLVFGVDENAVREVFEGQGQIQGIRLPTDAETGR 376
Query: 107 SRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+GYG+V +S+ E AL L G ++ GRA+R+ + R
Sbjct: 377 PKGYGYVEFSSVDEARQALNDLQGTDIGGRAIRLDFSTPR 416
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 54/84 (64%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ LFVGNLSW+V E L + F+E+G + G R++ + ESGRSRG+G+V Y+ + +
Sbjct: 227 ADNSPNLFVGNLSWNVDEEWLRREFEEFGELSGVRIMTERESGRSRGFGYVEYADASSAK 286
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A E+ E++GR + + A+ R
Sbjct: 287 AAYEAKKDAEIDGRTINLDYAKPR 310
>gi|431907193|gb|ELK11259.1| Putative RNA-binding protein 23 [Pteropus alecto]
Length = 914
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 177 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 235
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 236 QKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSESE 295
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 296 CARRALEQLNGFELAGRPMRV 316
Score = 42.0 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 269 IDNIVLMKDSDTGRSKGYGFITFSESECARRALEQLNGFELAGRPMRV 316
>gi|116781810|gb|ABK22248.1| unknown [Picea sitchensis]
Length = 215
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 57/78 (73%)
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
++ FVG LSWS + +L AF ++G+++ A+V+ D ++GRSRG+GFV + K ME A++
Sbjct: 7 YRCFVGGLSWSTSDRTLEDAFHKFGHLIEAKVVVDRDTGRSRGFGFVTFDDKKSMEDAID 66
Query: 127 SLNGVELEGRAMRVSLAQ 144
S++G+ L+GR++ V A+
Sbjct: 67 SMHGMSLDGRSITVDRAR 84
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 1 MLSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
L + V+ DR+TGRSRGF FVT + I+++ G GR + V D+ +PK
Sbjct: 32 HLIEAKVVVDRDTGRSRGFGFVTFDDKKSMEDAIDSMHGMSLDGRSITV---DRARPK 86
>gi|336267120|ref|XP_003348326.1| hypothetical protein SMAC_02824 [Sordaria macrospora k-hell]
Length = 377
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 15/154 (9%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-----DKPKPKLP- 60
V+ DRE+GRSRGF +V + + G GR +R++F+ +KP+ K
Sbjct: 198 VVTDRESGRSRGFGYVDFENNDQAQKAYDAKSGGLLEGREMRLDFASKDAGNKPQAKAAD 257
Query: 61 --------LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
+ E+D LFVGN+ ++ +++ F +V R+ D ESGR +G+ +
Sbjct: 258 RAAKHGDTISPESDT-LFVGNMPFTADESAVSDFFNSVASVASLRIPTDQESGRPKGFAY 316
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
V +++ + + A + LNG +L+GR +R+ A+ R
Sbjct: 317 VTFNSIEDAKNAFDQLNGSDLQGRPVRLDYAKPR 350
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNL W + L F+E ARV+ D ESGRSRG+G+V + + + A ++
Sbjct: 169 LWVGNLGWGIDDAILFAEFEECEGAKSARVVTDRESGRSRGFGYVDFENNDQAQKAYDAK 228
Query: 129 NGVELEGRAMRVSLA 143
+G LEGR MR+ A
Sbjct: 229 SGGLLEGREMRLDFA 243
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK 56
++ L + D+E+GR +GFA+VT +++ED + L+G + GR +R++++ KP+
Sbjct: 297 VASLRIPTDQESGRPKGFAYVTFNSIEDAKNAFDQLNGSDLQGRPVRLDYA-KPR 350
>gi|212722626|ref|NP_001131649.1| uncharacterized protein LOC100193009 [Zea mays]
gi|194692152|gb|ACF80160.1| unknown [Zea mays]
Length = 314
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 73/130 (56%), Gaps = 14/130 (10%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRIL-------------RVNFSDKPK 56
D E+G SRG A VTM ++ + A I+ LDG + GR + VN +
Sbjct: 163 DAESGISRGTASVTMRSLAEARAAIDALDGFDMDGREVFVKLASDVISNRKNVNLAHITP 222
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
K ++ ET K++VGNL+WSV + L + F + G VV R+L D + GR+R YGF+ +S
Sbjct: 223 TKDHIF-ETPHKVYVGNLAWSVQPQDLRELFTQCGTVVSTRLLTDRKGGRNRVYGFLSFS 281
Query: 117 TKAEMETALE 126
+ E+E AL+
Sbjct: 282 SAQELEEALK 291
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 55 PKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 114
P+P+ +LFV NL + L + F +G V+ + D ESG SRG V
Sbjct: 126 PRPR---------ELFVCNLPRRCDVQDLLELFTPHGTVLSVEISRDAESGISRGTASVT 176
Query: 115 YSTKAEMETALESLNGVELEGRAMRVSLA 143
+ AE A+++L+G +++GR + V LA
Sbjct: 177 MRSLAEARAAIDALDGFDMDGREVFVKLA 205
>gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
Length = 272
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 9/113 (7%)
Query: 43 LGRILRVNFSDK---------PKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 93
+G ILR S + P + + KLF+G LS+S SL +AF +YG V
Sbjct: 7 VGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAFYKYGEV 66
Query: 94 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ ARV+ D E+GRSRG+GFV +++ E +A+++L+G +L GR +RV+ A R
Sbjct: 67 IEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDR 119
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
V+ DRETGRSRGF FVT ++ E+ ++ I+ LDG++ GR +RVN++
Sbjct: 71 VIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYA 116
>gi|469070|dbj|BAA03741.1| RNA-binding glycine-rich protein-1a [Nicotiana sylvestris]
gi|295393563|gb|ADG03637.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 156
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 59/82 (71%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AE +++ FVG L+W+ T ++L +AF ++G ++ ++++ D E+GRSRG+GFV + + M
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGEAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMR 61
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG +L+GR + V+ AQ
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQ 83
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + IE ++G++ GR + VN
Sbjct: 37 IINDRETGRSRGFGFVTFKDEKAMRDAIEGMNGQDLDGRNITVN 80
>gi|356538787|ref|XP_003537882.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 170
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 61/86 (70%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +F+ FVG L+W ++L +AF YG++V ++V+ D E+GRSRG+GFV ++++ M+
Sbjct: 4 ADVEFRCFVGGLAWVTGNDALEKAFSIYGDIVESKVINDRETGRSRGFGFVTFASEQSMK 63
Query: 123 TALESLNGVELEGRAMRVSLAQGRRS 148
A+ +NG +L+GR + V+ AQ R S
Sbjct: 64 DAIAGMNGQDLDGRNITVNEAQTRAS 89
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
V+ DRETGRSRGF FVT ++ + I ++G++ GR + VN
Sbjct: 39 VINDRETGRSRGFGFVTFASEQSMKDAIAGMNGQDLDGRNITVN 82
>gi|221044666|dbj|BAH14010.1| unnamed protein product [Homo sapiens]
Length = 270
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 27 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 85
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 86 QKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 145
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 146 CARRALEQLNGFELAGRPMRV 166
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 119 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 166
>gi|90265701|dbj|BAE91897.1| glycine-rich RNA-binding protein [Lolium perenne]
Length = 107
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 56/79 (70%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+++ FVG L+W+ +SL QAF ++G + +++ D E+GRSRG+GFV +S+ M+ A+
Sbjct: 4 EYRCFVGGLAWATNDQSLEQAFSQFGEITDCKIINDRETGRSRGFGFVTFSSSESMKNAI 63
Query: 126 ESLNGVELEGRAMRVSLAQ 144
E +NG +L+GR + V+ AQ
Sbjct: 64 EGMNGQDLDGRNITVNEAQ 82
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ ++ DRETGRSRGF FVT S+ E IE ++G++ GR + VN
Sbjct: 31 ITDCKIINDRETGRSRGFGFVTFSSSESMKNAIEGMNGQDLDGRNITVN 79
>gi|344228406|gb|EGV60292.1| hypothetical protein CANTEDRAFT_136776 [Candida tenuis ATCC 10573]
Length = 647
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/144 (31%), Positives = 77/144 (53%), Gaps = 14/144 (9%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP----LYAETDFK- 68
G+S+GF FV D ++ L+ +E G+ + V + K + ++ Y T +
Sbjct: 269 GKSKGFGFVNFDNHNDAVKAVDELNNKEIAGQPIYVGRAQKKRERMEELRRQYEATKLEK 328
Query: 69 --------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
LF+ NL ++ +E L F+ +GN+ ARV+ D E G+S+G+GFVC+S+ E
Sbjct: 329 LSKYQGVNLFIKNLDDTIDSEKLENEFKPFGNITSARVMVD-EQGKSKGFGFVCFSSPEE 387
Query: 121 METALESLNGVELEGRAMRVSLAQ 144
A+ +N +EG+ + V+LAQ
Sbjct: 388 ATKAITEMNQRMVEGKPLYVALAQ 411
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE--TDF-K 68
E G S+ F FV T E A IEN++G R + V K + + E +F
Sbjct: 174 ELGNSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKKDRESKFEEMKANFTN 233
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FV NL+ T + L + F YG + + + D E G+S+G+GFV + + A++ L
Sbjct: 234 VFVKNLAPEYTDQELKELFSAYGPITSSYLEKDLE-GKSKGFGFVNFDNHNDAVKAVDEL 292
Query: 129 NGVELEGRAMRVSLAQGRR 147
N E+ G+ + V AQ +R
Sbjct: 293 NNKEIAGQPIYVGRAQKKR 311
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 41/82 (50%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
ET L+VG L+ SV L + F G V RV D + +S GY +V + + E
Sbjct: 47 GETSASLYVGELNTSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFVKFDDGE 106
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E LN +EGR R+ +Q
Sbjct: 107 QAIEDLNYSLIEGRPCRIMWSQ 128
>gi|432865704|ref|XP_004070572.1| PREDICTED: embryonic polyadenylate-binding protein-like [Oryzias
latipes]
Length = 624
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 19/150 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV---------------NFSDKPK 56
E GRSRGF FV + ED ++ ++G+E G+I+ V F +
Sbjct: 226 EKGRSRGFGFVNYAHHEDAQKAVDEMNGKEMNGKIIYVGRAQKRLERQGELKRKFDQLKQ 285
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL S+ E L + F YG + A+V+ E+G+S+G+GFVC+S
Sbjct: 286 DRIQRYQGVN--LYVKNLDDSIDDERLRKEFSPYGTITSAKVM--TEAGQSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ E A+ +NG + + + V+LAQ R
Sbjct: 342 SPEEATKAVTEMNGRIVATKPLYVALAQRR 371
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---LFVG 72
S+G+ FV T E N IE ++G R + V K + + K +++
Sbjct: 137 SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKEREVEFGTKVMKFTNIYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N ++T E L +AF +G + RV+ D E GRSRG+GFV Y+ + + A++ +NG E
Sbjct: 197 NFGDNLTDEKLKEAFSAFGKTLSVRVMRD-EKGRSRGFGFVNYAHHEDAQKAVDEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ R
Sbjct: 256 MNGKIIYVGRAQKR 269
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A++ D ++ ++ GR +R+ +S + P L
Sbjct: 40 IRVCRDIITRRSLGYAYINFQQPADAECALDTMNYDVIKGRPIRIMWSQR-DPALRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ N+ S+ ++L F +GN++ +V+ D E G S+GYGFV + T+ A
Sbjct: 99 GN--IFIKNIDDSIDNKALYDTFSAFGNILSCKVVCD-ERG-SKGYGFVHFETQEAANRA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E++NG+ L R + V + R+
Sbjct: 155 IETMNGMLLNDRKVFVGHFKSRK 177
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P PL + L+VG+L VT L Q F G +V RV D + RS GY ++ +
Sbjct: 6 PGYPLAS-----LYVGDLHPDVTEAMLYQKFSPAGPIVSIRVCRDIITRRSLGYAYINFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
A+ E AL+++N ++GR +R+ +Q
Sbjct: 61 QPADAECALDTMNYDVIKGRPIRIMWSQ 88
>gi|119586631|gb|EAW66227.1| RNA binding motif protein 23, isoform CRA_f [Homo sapiens]
Length = 269
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 27 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 85
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 86 QKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 145
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 146 CARRALEQLNGFELAGRPMRV 166
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 119 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 166
>gi|380793569|gb|AFE68660.1| polyadenylate-binding protein 4 isoform 3, partial [Macaca mulatta]
Length = 485
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+I+ V + K K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK---KVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 14/139 (10%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDG------REYLGRILRVNFSDKPKPKLPLYAET-DF- 67
S+G+AFV T E + IE ++G + ++GR F + + + L A+ +F
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR-----FKSRKEREAELGAKAKEFT 191
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+++ N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 128 LNGVELEGRAMRVSLAQGR 146
+NG E+ G+ + V AQ +
Sbjct: 251 MNGKEISGKIIFVGRAQKK 269
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|380483681|emb|CCF40465.1| cutinase negative acting protein [Colletotrichum higginsianum]
Length = 401
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 11/121 (9%)
Query: 23 TMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTES 82
T + VE+ + + LD G+ R + SDK LFVG+L+W+V S
Sbjct: 175 TEAKVEEPSKKRKALDEPVIPGKKARTDISDK-----------SSTLFVGSLAWAVDDNS 223
Query: 83 LTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSL 142
L +AFQE+ ++ GARV+ D +GRSRG+G+V ++T ALE G EL GRAM +
Sbjct: 224 LYEAFQEFSDLTGARVVTDKATGRSRGFGYVDFATPEAAAAALEGSQGRELAGRAMNIDF 283
Query: 143 A 143
+
Sbjct: 284 S 284
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 17/145 (11%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-DKP----K 56
L+ V+ D+ TGRSRGF +V +T E A +E GRE GR + ++FS KP
Sbjct: 234 LTGARVVTDKATGRSRGFGYVDFATPEAAAAALEGSQGRELAGRAMNIDFSGQKPAGEGN 293
Query: 57 PKLPLY-----------AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG 105
P+ + E+D LFVGNL + V +++ F E V R+ D ESG
Sbjct: 294 PQARAFDRAQKHGDTVSPESD-TLFVGNLPFDVDQDTVRAFFSEAAEVTSVRLPTDPESG 352
Query: 106 RSRGYGFVCYSTKAEMETALESLNG 130
+G+G+V +++ + +TA LNG
Sbjct: 353 NLKGFGYVSFNSIDDAKTAFAQLNG 377
>gi|255549774|ref|XP_002515938.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223544843|gb|EEF46358.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 608
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/155 (34%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPKPKLPLYAE- 64
V+ G+SRGF FV + ED ++ L+G + R L V + K + K L E
Sbjct: 229 VIMQDHNGKSRGFGFVDFESPEDAKKAVDALNGYQLESRTLFVGRAQAKAERKKILQHEY 288
Query: 65 --------TDFK---LFVGNLSWSVTTESLTQAFQEYGNVVGARVL-YDGESGRSRGYGF 112
FK L+V NL+ + + L + F G +V A+V+ YD +G SRG+GF
Sbjct: 289 KDIFNTHMEKFKASNLYVKNLALCIDNDKLQELFSCSGKIVSAKVMRYD--NGASRGFGF 346
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLAQGRR 147
VC+S+ E + AL +LNG +G+++ V++AQ +R
Sbjct: 347 VCFSSPEEAKKALNALNGAVFQGKSLYVAMAQCKR 381
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 12/142 (8%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENL------DGREYLGRILRVNFSDKPKPKLPLYAET 65
E G+S+G+ FV + + A L + + Y+ R ++ + Y E
Sbjct: 141 EHGKSKGYGFVQFDSEDSALAARTALHDTMLKEKKLYVSRFVK----KSERTTATSYDEL 196
Query: 66 DF-KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
F L+V NLS +T ++ F +G ++ A ++ D +G+SRG+GFV + + + + A
Sbjct: 197 KFTNLYVKNLSKDMTQDAFHNMFSAFGEIISAVIMQD-HNGKSRGFGFVDFESPEDAKKA 255
Query: 125 LESLNGVELEGRAMRVSLAQGR 146
+++LNG +LE R + V AQ +
Sbjct: 256 VDALNGYQLESRTLFVGRAQAK 277
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 7/130 (5%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDF-KLFV 71
TGRS + +V D + NL+ G+++R+ + + P ++ L+V
Sbjct: 56 TGRSLCYGYVNFYRPYDAYKALSNLNHTYLKGKLMRIMWCQRN----PCARKSGIGNLYV 111
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
NL S+ + L F ++G ++ +V+ E G+S+GYGFV + ++ A +L+
Sbjct: 112 KNLDASIDSAGLQSLFSKFGTILSCKVVE--EHGKSKGYGFVQFDSEDSALAARTALHDT 169
Query: 132 ELEGRAMRVS 141
L+ + + VS
Sbjct: 170 MLKEKKLYVS 179
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 45 RILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
+++ + P+P+L LY VG+L VT +L F G + + +
Sbjct: 5 QLVSLKLPGDPRPRLSLY--------VGDLDPEVTEMNLRTVFSSMGPIRNVHLCRCSLT 56
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
GRS YG+V + + AL +LN L+G+ MR+ Q
Sbjct: 57 GRSLCYGYVNFYRPYDAYKALSNLNHTYLKGKLMRIMWCQ 96
>gi|256082940|ref|XP_002577709.1| splicing factor [Schistosoma mansoni]
gi|360043602|emb|CCD81148.1| putative splicing factor [Schistosoma mansoni]
Length = 463
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 10/144 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK------PKLP 60
++ D +T RS+G A+V VE + L G LG +++ S K P LP
Sbjct: 135 LIMDNKTKRSKGIAYVEFREVESAQLAL-GLTGTRLLGVPIQIQQSHAEKNRVSATPSLP 193
Query: 61 LYAETD---FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
++ + KL++G+L +++T E L F+ +G + +++ D + RS+GYGFV Y
Sbjct: 194 RPSQQNRGPMKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPTTNRSQGYGFVTYVN 253
Query: 118 KAEMETALESLNGVELEGRAMRVS 141
+ + AL+ LNG EL GR M+V+
Sbjct: 254 SDDAKKALDQLNGFELAGRPMKVN 277
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
+ + ++ D T RS+G+ FVT +D ++ L+G E GR ++VN
Sbjct: 229 IEDIKLIKDPTTNRSQGYGFVTYVNSDDAKKALDQLNGFELAGRPMKVN 277
>gi|224059014|ref|XP_002299678.1| predicted protein [Populus trichocarpa]
gi|222846936|gb|EEE84483.1| predicted protein [Populus trichocarpa]
Length = 147
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 58/84 (69%)
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ E +++ F+G LSWS + L + F+++G+++ A+V+ D SGRSRG+GFV + K
Sbjct: 1 MSEELEYRCFIGGLSWSTSDRGLKETFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKA 60
Query: 121 METALESLNGVELEGRAMRVSLAQ 144
ME A+E +NG++L+GR + V AQ
Sbjct: 61 MEDAIEGMNGMDLDGRTITVDKAQ 84
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
L + V+ D+ +GRSRGF FVT + IE ++G + GR + V DK +P+
Sbjct: 33 LLEAKVVVDKFSGRSRGFGFVTFDEKKAMEDAIEGMNGMDLDGRTITV---DKAQPQ 86
>gi|346321757|gb|EGX91356.1| nucleolin protein Nsr1, putative [Cordyceps militaris CM01]
Length = 438
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 20/159 (12%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPKPKLP----- 60
V+ D+ TGRSRGF +V + E E + G+E GR L +++++ KP P
Sbjct: 212 VVTDKNTGRSRGFGYVDFADSESATKAYEAMQGQEVDGRALNLDYANAKPAESKPQDRAA 271
Query: 61 ---------LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
L AE++ LFVGNL + +++ + F E V R+ D ESG +G+G
Sbjct: 272 DRASRHGDTLSAESE-TLFVGNLPFDTEQDAVREFFGEVAEVASIRLPTDPESGNLKGFG 330
Query: 112 FVCYSTKAEMETALESLNGVEL----EGRAMRVSLAQGR 146
+V +++ + +TALE+ NG + RA+R+ A R
Sbjct: 331 YVTFNSIDDAKTALEAKNGASIGNGRNARAVRLDFAGSR 369
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LF G+LSW V +L +AF+ + +V ARV+ D +GRSRG+G+V ++ A E++
Sbjct: 183 LFAGSLSWGVDDNALYEAFKSFSGLVHARVVTDKNTGRSRGFGYVDFADSESATKAYEAM 242
Query: 129 NGVELEGRAMRVSLAQGR 146
G E++GRA+ + A +
Sbjct: 243 QGQEVDGRALNLDYANAK 260
>gi|281343373|gb|EFB18957.1| hypothetical protein PANDA_015655 [Ailuropoda melanoleuca]
Length = 369
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 122 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 180
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 181 QKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 240
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 241 CARRALEQLNGFELAGRPMRV 261
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 214 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 261
>gi|356538789|ref|XP_003537883.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 140
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 58/82 (70%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A +++ FVG L+W+ +L +AF YGN+V ++++ D E+GRSRG+GFV ++++ M+
Sbjct: 4 AYVEYRCFVGGLAWATDDHALEKAFSHYGNIVESKIINDRETGRSRGFGFVTFASENSMK 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT ++ IE ++G+ GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFASENSMKDAIEGMNGQNLDGRNITVN 82
>gi|301781268|ref|XP_002926045.1| PREDICTED: probable RNA-binding protein 23-like isoform 1
[Ailuropoda melanoleuca]
Length = 446
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 199 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 257
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 258 QKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 317
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 318 CARRALEQLNGFELAGRPMRV 338
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 291 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 338
>gi|410961880|ref|XP_003987506.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Felis catus]
Length = 445
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 198 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 256
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 257 QKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 316
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 317 CARRALEQLNGFELAGRPMRV 337
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 290 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 337
>gi|390432205|gb|AFL91694.1| glycine-rich RNA binding protein [Raphanus sativus var.
raphanistroides]
Length = 153
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 59/82 (71%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ FVG L+W+ +L AF +YG+V+ ++++ D E+GRSRG+GFV + + M
Sbjct: 4 ADVEYRCFVGGLAWATDDRALETAFSQYGDVLDSKIINDRETGRSRGFGFVTFKDEKSMR 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E++NG +L+GR++ V+ AQ
Sbjct: 64 DAIEAMNGQDLDGRSITVNEAQ 85
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + IE ++G++ GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFKDEKSMRDAIEAMNGQDLDGRSITVN 82
>gi|73962355|ref|XP_848788.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Canis lupus
familiaris]
Length = 429
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 182 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 240
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 241 QKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 300
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 301 CARRALEQLNGFELAGRPMRV 321
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 274 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 321
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 10/149 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
V DR TG+SRGF FV +T E NA + +E GR + ++ + KP P
Sbjct: 352 VQMDRNTGKSRGFGFVEFATAEGANAAVALNGQKEIDGRAVNLDKTS-AKPADPERRAKA 410
Query: 67 FK---------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
F LFVGN+S+ +T + L + F EYG V R+ D ++ R +GYG+V +
Sbjct: 411 FGDSTSAPSSVLFVGNVSFDMTEDGLWEVFAEYGEVKSVRLPTDRDTQRLKGYGYVEFVD 470
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQGR 146
+ A E G+++ GR +R+ AQ R
Sbjct: 471 VESAKKAFEGARGMDVGGRTIRLDYAQPR 499
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG LSW+V + L Q F + G VV ARV D +G+SRG+GFV ++T AE A +L
Sbjct: 323 VFVGRLSWNVDNDWLAQEFADCGEVVSARVQMDRNTGKSRGFGFVEFAT-AEGANAAVAL 381
Query: 129 NGV-ELEGRAM 138
NG E++GRA+
Sbjct: 382 NGQKEIDGRAV 392
>gi|440796891|gb|ELR17992.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 147
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 52/76 (68%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LSW SL AF+++G VV A+V+ D ++G+SRG+GFV +++ E E A +
Sbjct: 4 KLFVGGLSWGTDDNSLRSAFEQHGEVVDAKVIQDRDTGKSRGFGFVTFASADEAEAAKNA 63
Query: 128 LNGVELEGRAMRVSLA 143
LN EL+GR +RV A
Sbjct: 64 LNQTELDGREIRVDSA 79
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
V+ DR+TG+SRGF FVT ++ ++ A L+ E GR +RV+
Sbjct: 34 VIQDRDTGKSRGFGFVTFASADEAEAAKNALNQTELDGREIRVD 77
>gi|410961882|ref|XP_003987507.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Felis catus]
Length = 429
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 182 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 240
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 241 QKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 300
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 301 CARRALEQLNGFELAGRPMRV 321
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 274 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 321
>gi|395745189|ref|XP_002824146.2| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Pongo
abelii]
Length = 636
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 19/148 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI---------LRVNFSDKPK 56
E+G+S+GF FV+ ED ++ ++G+E Y+GR L+ F +
Sbjct: 226 ESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQ 285
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL + E L +AF +G + A+V+ +G GRS+G+GFVC+S
Sbjct: 286 DRITRYQVVN--LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVATKPLYVALAQ 369
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 14/139 (10%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDG------REYLGRILRVNFSDKPKPKLPLYAET-DF- 67
S+G+ FV T E IE ++G + ++GR F + + + L A+ +F
Sbjct: 137 SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGR-----FKSRKEREAELGAKAKEFP 191
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+++ N + E L F ++G + +V+ D ESG+S+G+GFV + + + A++
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFEKHEDAQKAVDE 250
Query: 128 LNGVELEGRAMRVSLAQGR 146
+NG EL G+ + V AQ +
Sbjct: 251 MNGKELSGKQIYVGRAQKK 269
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS +A+V +D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDLITRRSSNYAYVNFQHPKDAEHALDTMNFDVIKGKPVRIMWS-QHDPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +FV NL S+ ++L +GN++ +V+ D E+G S+GYGFV + T E A
Sbjct: 99 GN--IFVKNLDKSINNKALYDTVSAFGNILSCKVVCD-ENG-SKGYGFVHFETHEAAERA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P P Y L+VG+L VT L + F G ++ RV D + RS Y +V +
Sbjct: 3 PSTPSYPTA--SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E AL+++N ++G+ +R+ +Q
Sbjct: 61 HPKDAEHALDTMNFDVIKGKPVRIMWSQ 88
>gi|2674201|gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 164
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 59/84 (70%)
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ A+ +++ FVG L+W+ T +SL +AF YG ++ ++++ D E+GRSRG+GFV ++ +
Sbjct: 1 MSADIEYRCFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKS 60
Query: 121 METALESLNGVELEGRAMRVSLAQ 144
M A++ +N EL+GR + V+ AQ
Sbjct: 61 MRDAIQGMNSQELDGRNITVNEAQ 84
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + + I+ ++ +E GR + VN
Sbjct: 38 IINDRETGRSRGFGFVTFNNEKSMRDAIQGMNSQELDGRNITVN 81
>gi|410929559|ref|XP_003978167.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 385
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+T + FV A I ++GR+ LG+ ++VN++ P + + F +FV
Sbjct: 41 DTAGHDPYCFVEFYEHRHATATIAAMNGRKILGKEVKVNWATTPTSQKKD-TSSHFHVFV 99
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS +TT+ + AF +G + RV+ D +G+S+GYGFV + K + E A++ + G
Sbjct: 100 GDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 159
Query: 132 ELEGRAMRVSLA 143
L GR +R + A
Sbjct: 160 WLGGRQIRTNWA 171
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPKPK-- 58
+S V+ D TG+S+G+ FV+ D I+ + G+ GR +R N++ KP PK
Sbjct: 121 ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT 180
Query: 59 --------------LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
+ + ++ ++ G ++ +T + + Q F +G+++ RV D
Sbjct: 181 NETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGHIMEIRVFPD--- 237
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +++ A+ S+NG +EG ++
Sbjct: 238 ---KGYSFVRFNSHEAAAHAIVSVNGTTIEGYVVK 269
>gi|262196624|ref|YP_003267833.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
gi|262079971|gb|ACY15940.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
Length = 125
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 54/79 (68%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K+FVG LSW SL AF+ +G V A+V+ D ++GRSRG+GFV ++ + A+E
Sbjct: 4 KIFVGGLSWDTDDSSLRAAFERFGAVTEAKVITDRDTGRSRGFGFVTFAESGQAAAAIEE 63
Query: 128 LNGVELEGRAMRVSLAQGR 146
++GVEL+GR +RV+ AQ R
Sbjct: 64 MDGVELDGRNIRVNEAQER 82
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
+++ V+ DR+TGRSRGF FVT + A IE +DG E GR +RVN
Sbjct: 29 VTEAKVITDRDTGRSRGFGFVTFAESGQAAAAIEEMDGVELDGRNIRVN 77
>gi|375108277|ref|ZP_09754538.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374669008|gb|EHR73793.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 167
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 56/79 (70%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KL+VGNL++SV ESL AF ++G V A+V+ D E+GRS+G+GFV T AE + A+
Sbjct: 4 KLYVGNLAYSVRDESLQAAFSQFGTVTSAKVMMDRETGRSKGFGFVEMGTGAEAQAAING 63
Query: 128 LNGVELEGRAMRVSLAQGR 146
+NG LEGRA+ V+ A+ R
Sbjct: 64 MNGQPLEGRAVVVNEARPR 82
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
++ V+ DRETGRS+GF FV M T + A I ++G+ GR + VN +P+ + P
Sbjct: 29 VTSAKVMMDRETGRSKGFGFVEMGTGAEAQAAINGMNGQPLEGRAVVVN-EARPREERP 86
>gi|254566735|ref|XP_002490478.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|238030274|emb|CAY68197.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|328350869|emb|CCA37269.1| Nuclear polyadenylated RNA-binding protein 4 [Komagataella pastoris
CBS 7435]
Length = 462
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 16/149 (10%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIEN---LDGREYLGRILRVNFSDKPKPK 58
++ LT++ D TGRSRGF F+T + + V++ LDG+ PK
Sbjct: 179 ITDLTIMRDNATGRSRGFGFLTFTKTASVDEVLKKQHVLDGKLI-----------DPKRA 227
Query: 59 LPLYAETDF-KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
+P + K+FVG ++ VT E T F ++G ++ A+++ D ++GRSRG+GFV Y +
Sbjct: 228 IPREEQDKTGKIFVGGIAAEVTEEDFTDYFSQFGTIIDAQLMIDKDTGRSRGFGFVTYDS 287
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQGR 146
++ + V L+GR+M + A+ R
Sbjct: 288 PDAVDRVCAN-KYVPLKGRSMEIKRAEPR 315
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 54 KPKP---KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 110
KP P K +Y K+F+G L+W T E+L F ++G++ ++ D +GRSRG+
Sbjct: 137 KPAPDSVKADIYKSEQGKMFIGGLNWETTEETLRNYFGQFGDITDLTIMRDNATGRSRGF 196
Query: 111 GFVCYSTKAEMETALE 126
GF+ ++ A ++ L+
Sbjct: 197 GFLTFTKTASVDEVLK 212
>gi|331230317|ref|XP_003327823.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168138|ref|XP_003889766.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168140|ref|XP_003889767.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306813|gb|EFP83404.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167366|gb|EHS63397.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167367|gb|EHS63398.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 471
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-DKPKPKLPLYAETDFKLFVGNLSWS 77
+ FV + ++ L GR+ +RVN++ + + T + +FVG+LS
Sbjct: 153 YGFVEYYEMRSAETALQTLGGRKIFDTEIRVNWAYQNSQSNVKEDLSTHYHVFVGDLSPE 212
Query: 78 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 137
V E L +AF +G++ ARV++D SG+SRGYGF+ + K + E A+ ++NG L RA
Sbjct: 213 VNDEVLAKAFAAFGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRA 272
Query: 138 MRVSLAQGR 146
+RV+ A +
Sbjct: 273 IRVNWANQK 281
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 46/183 (25%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSDKPKPKL- 59
LS V++D +G+SRG+ F+ D I ++G E+LG R +RVN++++ +
Sbjct: 228 LSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNG-EWLGSRAIRVNWANQKNQGMA 286
Query: 60 ----------------------------------PLYAETDFKLFVGNLSWSVTTESLTQ 85
P Y T ++ GNL T L
Sbjct: 287 ATPGAVIAPGMGSGGMNRGGFGGATNYEAVVQQAPAYNTT---VYTGNLVPYSTQADLIP 343
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G +V R+ D RG+ FV T A+ +L G + GR ++ S +
Sbjct: 344 LFQGFGYIVEIRMQAD------RGFAFVKMDTHENAAMAIVNLTGTPVHGRPLKCSWGKD 397
Query: 146 RRS 148
R S
Sbjct: 398 RAS 400
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR-SRGYGFVCYSTKAEMETALES 127
L+VGNLS VT L + F G V G +++ D YGFV Y ETAL++
Sbjct: 111 LYVGNLSPRVTEYMLQEIFSVAGPVQGVKIIPDRNFQHGGLNYGFVEYYEMRSAETALQT 170
Query: 128 LNGVELEGRAMRVSLA 143
L G ++ +RV+ A
Sbjct: 171 LGGRKIFDTEIRVNWA 186
>gi|361126769|gb|EHK98755.1| putative Nuclear localization sequence-binding protein [Glarea
lozoyensis 74030]
Length = 525
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+++ VL DRE+GRS+GF +V S+ A + G GR V+FS P+
Sbjct: 293 ITRANVLTDRESGRSKGFGYVEFSSSAAAAAALAAKKGALIDGREANVDFS-TPRTNDAP 351
Query: 62 YAETDFK--------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS 107
A D + LFVGNLS+ V +++ +AF E+G VV R+ D +SG
Sbjct: 352 GARADNRAKQFGDSQNPPSDTLFVGNLSFEVDQDAVGEAFGEHGTVVNVRLPTDMDSGNP 411
Query: 108 RGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+G+G+V + + E +TA E++ G E+ GR R+ A R
Sbjct: 412 KGFGYVTFESIDEAKTAYEAMKGQEIAGRPCRLDYATPR 450
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVGNLSW++ E L + F+E+G + A VL D ESGRS+G+G+V +S+ A AL +
Sbjct: 269 LFVGNLSWNIDDEWLYREFEEFGEITRANVLTDRESGRSKGFGYVEFSSSAAAAAALAAK 328
Query: 129 NGVELEGRAMRVSLAQGR 146
G ++GR V + R
Sbjct: 329 KGALIDGREANVDFSTPR 346
>gi|10880789|gb|AAG24388.1|AF275678_1 PP239 protein [Homo sapiens]
Length = 418
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 175 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 233
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 234 QKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 293
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 294 CARRALEQLNGFELAGRPMRV 314
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 267 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 314
>gi|326479392|gb|EGE03402.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton equinum
CBS 127.97]
Length = 493
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 10/143 (6%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYL-GRILRVNFSDKPKPKLPL-YA 63
TV+ D +GRSRGF F+T + + N V+ YL G+IL + PK +P
Sbjct: 29 TVMRDGASGRSRGFGFLTFTDPKTVNTVMVK---EHYLDGKIL---YKIDPKRAIPRDEQ 82
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
E K+FVG +S T + Q F ++G VV A ++ D ++GR RG+GFV + ++A +E
Sbjct: 83 ERTSKIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEA 142
Query: 124 ALESLNGVELEGRAMRVSLAQGR 146
L +E+ G+A+ V AQ R
Sbjct: 143 TLSV--PLEIHGKAIEVKKAQPR 163
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+F+G L+W T +SL + F ++G V V+ DG SGRSRG+GF+ ++ + T +
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVM 57
>gi|301781272|ref|XP_002926047.1| PREDICTED: probable RNA-binding protein 23-like isoform 3
[Ailuropoda melanoleuca]
Length = 412
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 165 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 223
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 224 QKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 283
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 284 CARRALEQLNGFELAGRPMRV 304
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 257 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 304
>gi|335310533|ref|XP_003362077.1| PREDICTED: probable RNA-binding protein 23 [Sus scrofa]
Length = 443
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 199 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 257
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 258 QKGTGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 317
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MR+
Sbjct: 318 CARRALEQLNGFELAGRPMRI 338
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +R+
Sbjct: 291 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRI 338
>gi|7022544|dbj|BAA91638.1| unnamed protein product [Homo sapiens]
Length = 406
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 163 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 221
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 222 QKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 281
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 282 CARRALEQLNGFELAGRPMRV 302
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 255 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 302
>gi|170592088|ref|XP_001900801.1| RNA recognition motif. [Brugia malayi]
gi|158591668|gb|EDP30272.1| RNA recognition motif [Brugia malayi]
Length = 421
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++K V++D G + +AFV + ++ ++ R L + ++VN++ +P + +
Sbjct: 100 VTKTKVIFD---GTNDPYAFVEFADHYTAAQALQAMNKRVLLEKEMKVNWATEPGSQAKV 156
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
F +FVG+LS V ++L AF +G V A+V+ D + +S+GYGFV Y + E
Sbjct: 157 DTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEA 216
Query: 122 ETALESLNGVELEGRAMRVSLA 143
E A+E +NG L R +R + A
Sbjct: 217 ERAIEQMNGQWLGRRTIRTNWA 238
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 28/160 (17%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSDKPKPK-- 58
+S V+ D T +S+G+ FV+ E+ IE ++G ++LG R +R N++ + KP
Sbjct: 188 VSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNG-QWLGRRTIRTNWATR-KPTGT 245
Query: 59 --------------LPLYAET---DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD 101
+Y +T + ++VGN++ S E L AF ++G ++ R+
Sbjct: 246 GAGDGQYGRSELNYDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIF-- 303
Query: 102 GESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 141
+S+GY FV + K A+ +NG EL G+ ++ S
Sbjct: 304 ----KSQGYAFVRFDKKDSACNAICKMNGQELCGQNIKCS 339
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
++VGNL S+T + +T F + G V +V++DG + Y FV ++ AL+++
Sbjct: 76 VYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDP---YAFVEFADHYTAAQALQAM 132
Query: 129 NGVELEGRAMRVSLA 143
N L + M+V+ A
Sbjct: 133 NKRVLLEKEMKVNWA 147
>gi|355778434|gb|EHH63470.1| hypothetical protein EGM_16442, partial [Macaca fascicularis]
Length = 366
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 122 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 180
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 181 QKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 240
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 241 CARRALEQLNGFELAGRPMRV 261
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 214 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 261
>gi|301781270|ref|XP_002926046.1| PREDICTED: probable RNA-binding protein 23-like isoform 2
[Ailuropoda melanoleuca]
Length = 430
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 183 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 241
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 242 QKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 301
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 302 CARRALEQLNGFELAGRPMRV 322
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 275 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 322
>gi|345804022|ref|XP_003435135.1| PREDICTED: probable RNA-binding protein 23 [Canis lupus familiaris]
Length = 411
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 164 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 222
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 223 QKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 282
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 283 CARRALEQLNGFELAGRPMRV 303
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 256 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 303
>gi|261858408|dbj|BAI45726.1| RNA binding motif protein 23 [synthetic construct]
Length = 406
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 163 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 221
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 222 QKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 281
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 282 CARRALEQLNGFELAGRPMRV 302
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 255 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 302
>gi|171687819|ref|XP_001908850.1| hypothetical protein [Podospora anserina S mat+]
gi|170943871|emb|CAP69523.1| unnamed protein product [Podospora anserina S mat+]
Length = 459
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 12/157 (7%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP- 60
L+ V+ D+E+GRSRGF ++ T E+ +G + GR +R++F+ KP
Sbjct: 240 LTGARVVSDKESGRSRGFGYIDFDTHENAEKAFNAKNGGDLQGREMRLDFAAKPAAAPQD 299
Query: 61 -----------LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
+ + LFVGNL +S + ++ F E V R+ D ESGR +G
Sbjct: 300 RAAARASKHGDVVSPPSDTLFVGNLPFSADEDGVSAFFNEVAKVQSLRIPTDMESGRPKG 359
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ +V + + + + A E LNG +++GR +R+ A+ R
Sbjct: 360 FAYVSFYSIDDAKNAFEQLNGADIDGRPVRLDFAKPR 396
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
E L+ GNL W + L + F+++ + GARV+ D ESGRSRG+G++ + T E
Sbjct: 211 EKSATLWCGNLGWGIDDNILYEEFKDFEGLTGARVVSDKESGRSRGFGYIDFDTHENAEK 270
Query: 124 ALESLNGVELEGRAMRVSLA 143
A + NG +L+GR MR+ A
Sbjct: 271 AFNAKNGGDLQGREMRLDFA 290
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 60/93 (64%)
Query: 54 KPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 113
+P L + K+F+G +S+ L +AF +YGNVV AR++ D ++GRSRG+GFV
Sbjct: 27 RPSIYQALRCMSSSKIFIGGISFQTDDNGLKEAFDKYGNVVEARIIMDRDTGRSRGFGFV 86
Query: 114 CYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
Y++ E +A+++++G +L GR +RV+ A R
Sbjct: 87 TYTSSEEASSAIQAMDGQDLHGRRVRVNYATER 119
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF-SDKPK 56
++ DR+TGRSRGF FVT ++ E+ ++ I+ +DG++ GR +RVN+ +++P+
Sbjct: 71 IIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQDLHGRRVRVNYATERPQ 121
>gi|388490330|ref|NP_001253303.1| probable RNA-binding protein 23 [Macaca mulatta]
gi|380814244|gb|AFE78996.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
gi|384947950|gb|AFI37580.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 441
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 197 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 255
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 256 QKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 315
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 316 CARRALEQLNGFELAGRPMRV 336
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 289 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 336
>gi|402587661|gb|EJW81596.1| nucleolysin TIAR [Wuchereria bancrofti]
Length = 440
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++K V++D G + +AFV + ++ ++ R L + ++VN++ +P + +
Sbjct: 119 VTKTKVIFD---GTNDPYAFVEFADHYTAAQALQAMNKRVLLEKEMKVNWATEPGSQAKV 175
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
F +FVG+LS V ++L AF +G V A+V+ D + +S+GYGFV Y + E
Sbjct: 176 DTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEA 235
Query: 122 ETALESLNGVELEGRAMRVSLA 143
E A+E +NG L R +R + A
Sbjct: 236 ERAIEQMNGQWLGRRTIRTNWA 257
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 28/160 (17%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSDKPKPK-- 58
+S V+ D T +S+G+ FV+ E+ IE ++G ++LG R +R N++ + KP
Sbjct: 207 VSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNG-QWLGRRTIRTNWATR-KPTGT 264
Query: 59 --------------LPLYAET---DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD 101
+Y +T + ++VGN++ + E L AF ++G ++ R+
Sbjct: 265 GAGDGQYGRSELNYDDVYNQTGPDNTSVYVGNVNSNANDEDLRAAFDKFGRILEVRIF-- 322
Query: 102 GESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 141
+S+GY FV + K A+ +NG EL G+ ++ S
Sbjct: 323 ----KSQGYAFVRFDKKDSACNAICKMNGQELCGQNIKCS 358
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
++VGNL S+T + +T F + G V +V++DG + Y FV ++ AL+++
Sbjct: 95 VYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDP---YAFVEFADHYTAAQALQAM 151
Query: 129 NGVELEGRAMRVSLA 143
N L + M+V+ A
Sbjct: 152 NKRVLLEKEMKVNWA 166
>gi|383419607|gb|AFH33017.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 441
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 197 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 255
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 256 QKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 315
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 316 CARRALEQLNGFELAGRPMRV 336
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 289 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 336
>gi|393909208|gb|EFO19127.2| hypothetical protein LOAG_09365 [Loa loa]
Length = 421
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++K V++D G + +AFV + ++ ++ R L + ++VN++ +P + +
Sbjct: 100 VTKTKVIFD---GTNDPYAFVEFADHYTAAQALQAMNKRVLLEKEMKVNWATEPGSQAKV 156
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
F +FVG+LS V ++L AF +G V A+V+ D + +S+GYGFV Y + E
Sbjct: 157 DTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEA 216
Query: 122 ETALESLNGVELEGRAMRVSLA 143
E A+E +NG L R +R + A
Sbjct: 217 ERAIEQMNGQWLGRRTIRTNWA 238
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 28/160 (17%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSDKPKPK-- 58
+S V+ D T +S+G+ FV+ E+ IE ++G ++LG R +R N++ + KP
Sbjct: 188 VSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNG-QWLGRRTIRTNWATR-KPTGT 245
Query: 59 --------------LPLYAET---DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD 101
+Y +T + ++VGN++ S E L AF ++G ++ R+
Sbjct: 246 GAGDGQYGRTELNYDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIF-- 303
Query: 102 GESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 141
+S+GY FV + K A+ +NG EL G+ ++ S
Sbjct: 304 ----KSQGYAFVRFDKKDSACNAICKMNGQELCGQNIKCS 339
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
++VGNL S+T + +T F + G V +V++DG + Y FV ++ AL+++
Sbjct: 76 VYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDP---YAFVEFADHYTAAQALQAM 132
Query: 129 NGVELEGRAMRVSLA 143
N L + M+V+ A
Sbjct: 133 NKRVLLEKEMKVNWA 147
>gi|410961884|ref|XP_003987508.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Felis catus]
Length = 411
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 164 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 222
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 223 QKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 282
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 283 CARRALEQLNGFELAGRPMRV 303
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 256 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 303
>gi|350629665|gb|EHA18038.1| hypothetical protein ASPNIDRAFT_176547 [Aspergillus niger ATCC
1015]
Length = 496
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/128 (34%), Positives = 70/128 (54%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV ++ L+GR +RVN++ + F +FVG+LS V
Sbjct: 135 YGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEV 194
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
E L QAF +G+V ARV++D ++GRSRGYGFV + +++ + AL S++G L RA+
Sbjct: 195 NDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAI 254
Query: 139 RVSLAQGR 146
R + A +
Sbjct: 255 RCNWANQK 262
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + + ++DG E+LG R +R N+++ K +P +
Sbjct: 209 VSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDG-EWLGSRAIRCNWANQKGQPSI 267
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 268 SQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLVP 327
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G V+ R+ D RG+ F+ T A+ LNG + GR ++ S +
Sbjct: 328 LFQNFGYVIETRLQAD------RGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 381
Query: 146 R 146
R
Sbjct: 382 R 382
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE-SGRSRGYGFVCYSTKAEMETALES 127
L+VG L VT + L Q F+ G+VV +++ D + + YGFV + E A+++
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFNSKGYNYGFVEFDDPGAAERAMQT 152
Query: 128 LNGVELEGRAMRVSLA 143
LNG + +RV+ A
Sbjct: 153 LNGRRIHQSEIRVNWA 168
>gi|193648018|ref|XP_001950341.1| PREDICTED: nucleolysin TIAR-like [Acyrthosiphon pisum]
Length = 388
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 75/133 (56%), Gaps = 1/133 (0%)
Query: 11 RETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLF 70
RE G S +AF+ T + ++GR +L + ++VN++ P + L + +F
Sbjct: 41 REPG-SDPYAFLEFDTHSGAATALAAMNGRLFLDKEMKVNWATTPGNQPKLDTSNHYHIF 99
Query: 71 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 130
VG+LS + T +L +AF +G + R++ D ++ +S+GY FV + K++ E A+ S+NG
Sbjct: 100 VGDLSPEIETHTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKSDAENAINSMNG 159
Query: 131 VELEGRAMRVSLA 143
L R++R + +
Sbjct: 160 QWLGSRSIRTNWS 172
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 24/157 (15%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK--PKPKL 59
+S ++ D +T +S+G+AFV+ D I +++G+ R +R N+S + P P+
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKSDAENAINSMNGQWLGSRSIRTNWSTRKPPPPRA 181
Query: 60 P-------------LY---AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE 103
P +Y + T+ ++ G + +T E + Q F +G +V R
Sbjct: 182 PNKYSGYRAVTFDDVYNQSSPTNCTVYCGGIVEGLTEELVEQVFSRFGTIVEIRAF---- 237
Query: 104 SGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 140
R +GY F+ +STK TA+E+++ E+ G ++
Sbjct: 238 --RDKGYAFIKFSTKEAATTAIEAVHNTEINGHPVKC 272
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNL SVT E L F G V +V+ E G S Y F+ + T + TAL ++
Sbjct: 10 LYVGNLDPSVTEELLCALFTNIGPVNACKVIR--EPG-SDPYAFLEFDTHSGAATALAAM 66
Query: 129 NGVELEGRAMRVSLA 143
NG + M+V+ A
Sbjct: 67 NGRLFLDKEMKVNWA 81
>gi|356508388|ref|XP_003522939.1| PREDICTED: uncharacterized protein LOC100806292 [Glycine max]
Length = 185
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 59/79 (74%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+++ FVG L+W+ +++L +AF YG +V ++V+ D E+GRSRG+GFV ++++ M+ A+
Sbjct: 7 EYRCFVGGLAWATDSDALEKAFSHYGEIVESKVIIDRETGRSRGFGFVTFASEQAMKDAI 66
Query: 126 ESLNGVELEGRAMRVSLAQ 144
E +NG L+GR++ V+ AQ
Sbjct: 67 EGMNGQNLDGRSITVNEAQ 85
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
V+ DRETGRSRGF FVT ++ + IE ++G+ GR + VN
Sbjct: 39 VIIDRETGRSRGFGFVTFASEQAMKDAIEGMNGQNLDGRSITVN 82
>gi|312086091|ref|XP_003144941.1| hypothetical protein LOAG_09365 [Loa loa]
Length = 394
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++K V++D G + +AFV + ++ ++ R L + ++VN++ +P + +
Sbjct: 73 VTKTKVIFD---GTNDPYAFVEFADHYTAAQALQAMNKRVLLEKEMKVNWATEPGSQAKV 129
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
F +FVG+LS V ++L AF +G V A+V+ D + +S+GYGFV Y + E
Sbjct: 130 DTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEA 189
Query: 122 ETALESLNGVELEGRAMRVSLA 143
E A+E +NG L R +R + A
Sbjct: 190 ERAIEQMNGQWLGRRTIRTNWA 211
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 28/160 (17%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSDKPKPK-- 58
+S V+ D T +S+G+ FV+ E+ IE ++G ++LG R +R N++ + KP
Sbjct: 161 VSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNG-QWLGRRTIRTNWATR-KPTGT 218
Query: 59 --------------LPLYAET---DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD 101
+Y +T + ++VGN++ S E L AF ++G ++ R+
Sbjct: 219 GAGDGQYGRTELNYDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIF-- 276
Query: 102 GESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 141
+S+GY FV + K A+ +NG EL G+ ++ S
Sbjct: 277 ----KSQGYAFVRFDKKDSACNAICKMNGQELCGQNIKCS 312
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
++VGNL S+T + +T F + G V +V++DG + Y FV ++ AL+++
Sbjct: 49 VYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDP---YAFVEFADHYTAAQALQAM 105
Query: 129 NGVELEGRAMRVSLA 143
N L + M+V+ A
Sbjct: 106 NKRVLLEKEMKVNWA 120
>gi|307103841|gb|EFN52098.1| hypothetical protein CHLNCDRAFT_59028 [Chlorella variabilis]
Length = 634
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 85/160 (53%), Gaps = 19/160 (11%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGR---------I 46
++ ++ D E G+S+GF F+ E + ++ L+G++ Y+GR +
Sbjct: 245 VNSCIIMRDDE-GKSKGFGFINFEEPEQAASAVQALNGKDVNCKELYVGRAQKKAEREAM 303
Query: 47 LRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR 106
LR F + ++ Y L+V NL + E+L F ++G + A+V+ D +G+
Sbjct: 304 LRAKFEELRSERIAKY--QGMNLYVKNLHDDIDDETLRTEFSQFGTITSAKVMVDS-AGK 360
Query: 107 SRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
SRG+GFVCY++ E A+ +NG ++G+ + V+LAQ R
Sbjct: 361 SRGFGFVCYASPEEATRAVTEMNGRMIKGKPIYVALAQRR 400
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 76/143 (53%), Gaps = 9/143 (6%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREY---LGRILRVNFSDKPKPK 58
++ + V D T RS G+A+V ++V D A LD Y +GR +R+ +S +
Sbjct: 64 VASIRVCRDAVTRRSLGYAYVNYNSVLDPAAAERALDQLNYTPLVGRPMRIMWSHRD--- 120
Query: 59 LPLYAETDF-KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
P + ++ +F+ NL SV ++L F +GN++ +V D + G S+GYGFV +
Sbjct: 121 -PAFRKSGVGNIFIKNLDRSVDNKALHDTFSAFGNILSCKVAQDLK-GESKGYGFVHFEK 178
Query: 118 KAEMETALESLNGVELEGRAMRV 140
A+E +NG+ LEG+ + V
Sbjct: 179 DESARLAIEKVNGMLLEGKKVYV 201
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 19/142 (13%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDG------REYLGRILRVN--FSDKPKPKLPLYAET 65
G S+G+ FV E IE ++G + Y+G LR + SD +E
Sbjct: 166 GESKGYGFVHFEKDESARLAIEKVNGMLLEGKKVYVGPFLRRSERSSD---------SEV 216
Query: 66 DF-KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
F +FV NL +V+ + + F E+G V ++ D E G+S+G+GF+ + + +A
Sbjct: 217 KFTNVFVKNLDEAVSDDEVKAMFAEHGTVNSCIIMRDDE-GKSKGFGFINFEEPEQAASA 275
Query: 125 LESLNGVELEGRAMRVSLAQGR 146
+++LNG ++ + + V AQ +
Sbjct: 276 VQALNGKDVNCKELYVGRAQKK 297
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST---KAEMETAL 125
L+VG+L VT L + F + G V RV D + RS GY +V Y++ A E AL
Sbjct: 40 LYVGDLDRDVTEAQLFEVFSQIGPVASIRVCRDAVTRRSLGYAYVNYNSVLDPAAAERAL 99
Query: 126 ESLNGVELEGRAMRV 140
+ LN L GR MR+
Sbjct: 100 DQLNYTPLVGRPMRI 114
>gi|258570067|ref|XP_002543837.1| OsGRP2 protein [Uncinocarpus reesii 1704]
gi|237904107|gb|EEP78508.1| OsGRP2 protein [Uncinocarpus reesii 1704]
Length = 370
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 69/125 (55%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV ++ L+GR +RVN++ + F +FVG+LS V
Sbjct: 41 YGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEV 100
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
E L QAF +G+V ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+
Sbjct: 101 NDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAI 160
Query: 139 RVSLA 143
R + A
Sbjct: 161 RCNWA 165
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 23/161 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 115 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 173
Query: 60 PLYAETDFKLFVGNLSWSVTT-----ESLTQAFQEYGNVVGARVLYDGES---------G 105
+ + + + TT T Q Y VV + +
Sbjct: 174 ------SQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTTLALSLKTRFQ 227
Query: 106 RSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
RG+ FV T A+ LNG + GR ++ S + R
Sbjct: 228 ADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDR 268
>gi|149756180|ref|XP_001494897.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Equus
caballus]
Length = 430
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 184 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 242
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 243 QKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 302
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 303 CARRALEQLNGFELAGRPMRV 323
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 276 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 323
>gi|149756178|ref|XP_001494868.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Equus
caballus]
Length = 446
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 200 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 258
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 259 QKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 318
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 319 CARRALEQLNGFELAGRPMRV 339
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 292 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 339
>gi|149756182|ref|XP_001494921.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Equus
caballus]
Length = 412
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 166 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 224
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 225 QKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 284
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 285 CARRALEQLNGFELAGRPMRV 305
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 258 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 305
>gi|116734698|ref|NP_001070820.1| probable RNA-binding protein 23 isoform 3 [Homo sapiens]
gi|119586628|gb|EAW66224.1| RNA binding motif protein 23, isoform CRA_c [Homo sapiens]
Length = 405
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 163 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 221
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 222 QKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 281
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 282 CARRALEQLNGFELAGRPMRV 302
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 255 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 302
>gi|426376372|ref|XP_004054975.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Gorilla
gorilla gorilla]
Length = 437
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 197 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 255
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 256 QKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 315
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 316 CARRALEQLNGFELAGRPMRV 336
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 289 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 336
>gi|268533576|ref|XP_002631916.1| Hypothetical protein CBG07904 [Caenorhabditis briggsae]
Length = 411
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 79/145 (54%), Gaps = 6/145 (4%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-DKPKPKLP 60
++K V +D G + FAF+ ++ ++GR L R +RVN++ D +P
Sbjct: 63 VTKAKVCFD---GMNDPFAFIEFGDHNQAGQALQAMNGRSLLDREMRVNWAVDASQPGDS 119
Query: 61 LYAET--DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
ET F +FVG+LS V + L +AF +G+V A+++ D + +++GYGFV Y +
Sbjct: 120 RKQETSRHFHVFVGDLSSEVDSTKLREAFLAFGDVSEAKIIRDTATNKAKGYGFVSYPRR 179
Query: 119 AEMETALESLNGVELEGRAMRVSLA 143
+ E A+E +NG L R +R + A
Sbjct: 180 EDAERAIEQMNGQWLGRRTIRTNWA 204
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 35 ENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVV 94
+N D Y R+ F+++ L +E LFVGNL ++T E L F + G V
Sbjct: 6 QNDDSSGYNPRV-HARFAEREGYYLASGSEDPRTLFVGNLDPAITDEFLATLFNQIGAVT 64
Query: 95 GARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
A+V +D G + + F+ + + AL+++NG L R MRV+ A
Sbjct: 65 KAKVCFD---GMNDPFAFIEFGDHNQAGQALQAMNGRSLLDREMRVNWA 110
>gi|348502707|ref|XP_003438909.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Oreochromis niloticus]
Length = 623
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 19/150 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV---------------NFSDKPK 56
E GRSRGF FV + ED + ++G+E G+IL V F +
Sbjct: 226 EKGRSRGFGFVNYAHHEDAQKAVNEMNGKEINGKILYVGRAQKRLERQGELKRKFDQIKQ 285
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL S+ E L + F YG + A+V+ DG +S+G+GFVC+S
Sbjct: 286 DRIQRYQGVN--LYVKNLDDSIDDERLRKEFAPYGTITSAKVMTDGS--QSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ E A+ +NG + + + V+LAQ R
Sbjct: 342 SPEEATKAVTEMNGRIVATKPLYVALAQRR 371
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---LFVG 72
S+G+ FV T E N IE ++G R + V K + + K +++
Sbjct: 137 SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKEREVEFGSKAMKFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N T E L + F +G + RV+ D E GRSRG+GFV Y+ + + A+ +NG E
Sbjct: 197 NFGEDFTDEKLKEVFSAFGRTLSVRVMKD-EKGRSRGFGFVNYAHHEDAQKAVNEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ R
Sbjct: 256 INGKILYVGRAQKR 269
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ GR +R+ +S + P L
Sbjct: 40 IRVCRDIITRRSLGYAYVNFQQPADAECALDTMNYDVIKGRPIRIMWSQR-DPGLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ N+ S+ ++L F +GN++ +V+ D E G S+GYGFV + T+ A
Sbjct: 99 GN--IFIKNMDESIDNKALYDTFSAFGNILSCKVVCD-EKG-SKGYGFVHFETQEAANRA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E++NG+ L R + V + R+
Sbjct: 155 IETMNGMLLNDRKVFVGHFKSRK 177
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P PL + L+VG+L VT L Q F G ++ RV D + RS GY +V +
Sbjct: 6 PAYPLAS-----LYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
A+ E AL+++N ++GR +R+ +Q
Sbjct: 61 QPADAECALDTMNYDVIKGRPIRIMWSQ 88
>gi|624925|dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 259
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 54/76 (71%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LSW SL +AF ++G V+ ARV+ D ++GRSRG+GFV +++ E +AL +
Sbjct: 41 KLFVGGLSWGTDETSLKEAFSQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAASALTA 100
Query: 128 LNGVELEGRAMRVSLA 143
L+G +L GR +RV+ A
Sbjct: 101 LDGQDLHGRQIRVNYA 116
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 34/46 (73%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
V+ DR+TGRSRGF FV+ ++ E+ + + LDG++ GR +RVN++
Sbjct: 71 VIMDRDTGRSRGFGFVSFTSTEEAASALTALDGQDLHGRQIRVNYA 116
>gi|332222974|ref|XP_003260644.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Nomascus
leucogenys]
Length = 426
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 181 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 239
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 240 QKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 299
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 300 CARRALEQLNGFELAGRPMRV 320
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 273 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 320
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LS+ T ESL +AF +YGN+ V+ D E+GRSRG+GFV Y + + ALE
Sbjct: 6 KLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALEG 65
Query: 128 LNGVELEGRAMRVSLA 143
+NG ++GR +RV A
Sbjct: 66 MNGKSVDGRTIRVDEA 81
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++K+ V+ D+ETGRSRGF FV ED +E ++G+ GR +RV+
Sbjct: 31 IAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALEGMNGKSVDGRTIRVD 79
>gi|400597074|gb|EJP64818.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 769
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 17/152 (11%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD------------ 53
TV+ D++T SRGF FVT++ +D D + + R +RV ++
Sbjct: 72 TVVIDQQTKESRGFGFVTLADADDAKQAQIVFDKKRWEDRTIRVEVAEPRQRKEATEGAQ 131
Query: 54 -KPKPKLPLYAETDFKLFVGNLSWSV-TTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
+ KP P + T KL V NL WS+ +E L F+ YG V A + + G+ +G+G
Sbjct: 132 PRQKPGKPEFEPTP-KLIVRNLPWSIRNSEQLGHLFRSYGKVKFADLPKN--KGKLKGFG 188
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
FV K E ALE +NG E++GR + V A
Sbjct: 189 FVTLRGKKNAEKALEGINGKEIDGRTLAVDWA 220
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 60 PLYAETDFK--LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
P A T+ + LFV +L +VT ESL + F EY V A V+ D ++ SRG+GFV +
Sbjct: 33 PKKARTEERRSLFVRSLPPNVTNESLAEFFSEYFPVKHATVVIDQQTKESRGFGFVTLAD 92
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQGRR 147
+ + A + E R +RV +A+ R+
Sbjct: 93 ADDAKQAQIVFDKKRWEDRTIRVEVAEPRQ 122
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
+FV NL ++ E L F +GNV ARV+ D + R G FVC+ + + +T ++
Sbjct: 321 IFVRNLPFTTNDEHLKSFFSSFGNVRYARVVMDKATDRPAGTAFVCFYQEEDAKTCIK 378
>gi|387539272|gb|AFJ70263.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 439
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 197 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 255
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 256 QKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 315
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 316 CARRALEQLNGFELAGRPMRV 336
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 289 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 336
>gi|355693134|gb|EHH27737.1| hypothetical protein EGK_18008 [Macaca mulatta]
Length = 441
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 197 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 255
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 256 QKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 315
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 316 CARRALEQLNGFELAGRPMRV 336
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 289 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 336
>gi|387539270|gb|AFJ70262.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 423
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 181 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 239
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 240 QKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 299
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 300 CARRALEQLNGFELAGRPMRV 320
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 273 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 320
>gi|402901594|ref|XP_003913731.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 636
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 19/148 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI---------LRVNFSDKPK 56
E+G+S+GF FV+ ED ++ ++G+E Y+GR L+ F +
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQ 285
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL + E L +AF +G + A+V+ +G GRS+G+GFVC+S
Sbjct: 286 DRITRYQVVN--LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVATKPLYVALAQ 369
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 14/139 (10%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDG------REYLGRILRVNFSDKPKPKLPLYAET-DF- 67
S+G+ FV T E IE ++G + ++GR F + + + L A+ +F
Sbjct: 137 SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGR-----FKSRKEREAELGAKVKEFP 191
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+++ N + E L F ++G + +V+ D ESG+S+G+GFV + + + A++
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 128 LNGVELEGRAMRVSLAQGR 146
+NG EL G+ + V AQ +
Sbjct: 251 MNGKELNGKQIYVGRAQKK 269
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS +A+V +D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDVITRRSSSYAYVNFQHPKDAEHALDTMNFDVIKGKPVRIMWSQR-DPSLRRSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +FV NL S+ + L +GN++ +V+ D E+G S+GYGFV + T E A
Sbjct: 99 GN--IFVKNLDKSINNKVLYDTVSAFGNILSCKVVCD-ENG-SKGYGFVHFETHEAAERA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG L R + V + R+
Sbjct: 155 IEKMNGTLLNDRKVFVGRFKSRK 177
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P P Y L+VG+L VT L + F G ++ RV D + RS Y +V +
Sbjct: 3 PSTPSYPTA--SLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E AL+++N ++G+ +R+ +Q
Sbjct: 61 HPKDAEHALDTMNFDVIKGKPVRIMWSQ 88
>gi|332222976|ref|XP_003260645.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Nomascus
leucogenys]
Length = 442
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 197 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 255
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 256 QKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 315
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 316 CARRALEQLNGFELAGRPMRV 336
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 289 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 336
>gi|303284108|ref|XP_003061345.1| hypothetical protein MICPUCDRAFT_60999 [Micromonas pusilla
CCMP1545]
gi|226457696|gb|EEH54995.1| hypothetical protein MICPUCDRAFT_60999 [Micromonas pusilla
CCMP1545]
Length = 301
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 17/142 (11%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF-------------SDKPKPKLP 60
GRS+G+ V + + I L + GR + V ++ +P+
Sbjct: 160 GRSKGWGLVDFESPAAAESAIATLHNSDLQGRSIIVRLERAGGATKGPGGGANAGRPE-- 217
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
A + ++ V NL W+ T+E L Q FQ+ GNVV A + ++GRS+G+G V + T+ +
Sbjct: 218 --ASSGLQIVVRNLPWTTTSEDLRQVFQQVGNVVKADAVCHADTGRSKGWGTVLFETREQ 275
Query: 121 METALESLNGVELEGRAMRVSL 142
+ A++ NGVELE R M++ L
Sbjct: 276 AQAAIQGFNGVELESRPMQIKL 297
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 26/154 (16%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP---------------K 58
GRSRG+ V S+ + A I L+G R L V + P
Sbjct: 45 GRSRGYGIVEYSSAAEAQAAIAQLEGHTLGDRNLTVREDNAPTKTANSGGGSKSGGGRGS 104
Query: 59 LPLYAETD----FKLFVGNLSWSVTTESLTQAFQEY------GNVVGARVLYDGESGRSR 108
+ ET + ++GNL+W T ESL AF++Y G+VV A V GRS+
Sbjct: 105 GNVMGETPAAEGCRCYIGNLAWETTAESLVGAFEDYPHFSSVGSVVNAEVAKQ-PGGRSK 163
Query: 109 GYGFVCYSTKAEMETALESLNGVELEGRAMRVSL 142
G+G V + + A E+A+ +L+ +L+GR++ V L
Sbjct: 164 GWGLVDFESPAAAESAIATLHNSDLQGRSIIVRL 197
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+L+VGNL WS + L F G + + G GRSRGYG V YS+ AE + A+
Sbjct: 9 RLYVGNLPWSTDVDELRAIFSSCGAITHVDIP-KGRQGRSRGYGIVEYSSAAEAQAAIAQ 67
Query: 128 LNGVELEGRAMRV 140
L G L R + V
Sbjct: 68 LEGHTLGDRNLTV 80
>gi|12659074|gb|AAK01176.1| RNA-binding protein [Triticum aestivum]
Length = 183
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 54/79 (68%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D++ FVG+LSW+ T L AF ++G V +V+ D SGRSRG+GFV + K ME A+
Sbjct: 6 DYRCFVGSLSWNTTDVDLKDAFGKFGRVTETKVVLDKFSGRSRGFGFVTFDDKKAMEEAV 65
Query: 126 ESLNGVELEGRAMRVSLAQ 144
E++NG++L+GR + V AQ
Sbjct: 66 EAMNGIDLDGRNITVERAQ 84
>gi|408392881|gb|EKJ72170.1| hypothetical protein FPSE_07657 [Fusarium pseudograminearum CS3096]
Length = 484
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 47 LRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR 106
+RVN++ + F +FVG+LS V E LTQAF +G+V ARV++D ++GR
Sbjct: 163 IRVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGR 222
Query: 107 SRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
SRGYGFV + + E E AL S++G L RA+R + A +
Sbjct: 223 SRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQK 262
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKP-- 57
+S+ V++D +TGRSRG+ FV + + ++DG E+LG R +R N+++ K +P
Sbjct: 209 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDG-EWLGSRAIRCNWANQKGQPSM 267
Query: 58 --------------------KLPLYAETDFK------------LFVGNLSWSVTTESLTQ 85
+ P + ++ ++VGNL+ T +
Sbjct: 268 AQQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPSWQTTVYVGNLTPYTTPNDVVP 327
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ + A+ +NG + GR ++ S +
Sbjct: 328 LFQNFGFVVESRFQAD------RGFAFIKMDSHENAAMAICQMNGYNVNGRPLKCSWGKD 381
Query: 146 R 146
+
Sbjct: 382 K 382
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L++G L VT E L Q F+ G+V +++ D ++ R YGFV Y E A+++L
Sbjct: 84 LYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPD-KNARGYNYGFVEYDDPGAAERAMQTL 142
Query: 129 NG 130
NG
Sbjct: 143 NG 144
>gi|291403541|ref|XP_002718109.1| PREDICTED: RNA binding motif protein 23 isoform 2 [Oryctolagus
cuniculus]
Length = 444
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 199 IISDRNSRRSKGIAYVEFCDIQAVPLAI-GLTGQRLLGVPIMVQASQAEKNRLAAMANNL 257
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 258 QKGSGGPLRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 317
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 318 CGRRALEQLNGFELAGRPMRV 338
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV-NFSDKP 55
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV + +++P
Sbjct: 291 IDNIVLMKDSDTGRSKGYGFITFSDSECGRRALEQLNGFELAGRPMRVGHVTERP 345
>gi|294897114|ref|XP_002775830.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239882183|gb|EER07646.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 323
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 15/153 (9%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-PKLP 60
+ + V+ D+ TGR RGF FVT ST ++ VI + G+ + VN S PK P
Sbjct: 104 VERAIVMTDKMTGRCRGFGFVTYSTTDEVEVVIMKGGPHQLNGKRVDVNRSQDPKDPHRG 163
Query: 61 LYA------------ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSR 108
+ + K+F G L ++++E L Q F +YGN+V + D ++GRS+
Sbjct: 164 GWGSDRSGGPSRRGGDDPMKVFCGGLQSTLSSERLRQHFSQYGNIVDCIAMRDRDTGRSK 223
Query: 109 GYGFVCYSTKAEMETALESLNGVELEGRAMRVS 141
GYGFV + ++ + A+ N ++GR +R S
Sbjct: 224 GYGFVTFDSEDAVAAAINGNN--MIDGRWVRTS 254
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AE +LFVG + +T + Q F ++G+V A V+ D +GR RG+GFV YST E+E
Sbjct: 74 AEDRRQLFVGGIPEGITDDGFHQYFSQFGHVERAIVMTDKMTGRCRGFGFVTYSTTDEVE 133
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
+ +L G+ + V+ +Q
Sbjct: 134 VVIMKGGPHQLNGKRVDVNRSQ 155
>gi|426376374|ref|XP_004054976.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Gorilla
gorilla gorilla]
Length = 403
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 163 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 221
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 222 QKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 281
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 282 CARRALEQLNGFELAGRPMRV 302
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 255 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 302
>gi|212528804|ref|XP_002144559.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
gi|210073957|gb|EEA28044.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
Length = 454
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 13/147 (8%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYL-GRILRVNFSDKPKPKLP 60
+S+ TV+ D TGRSRGF F+T + N V+ YL G+I+ PK +P
Sbjct: 52 VSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK---EHYLDGKII------DPKRAIP 102
Query: 61 L-YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
E K+FVG +S T + Q F ++G VV A ++ D ++GR RG+GFV + ++A
Sbjct: 103 RDEQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEA 162
Query: 120 EMETALESLNGVELEGRAMRVSLAQGR 146
+E L +E+ G+++ V AQ R
Sbjct: 163 AVEATLS--RPLEILGKSIEVKKAQPR 187
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
L++ K+F+G L+W T +SL F ++G V V+ D +GRSRG+GF+ +
Sbjct: 20 LFSSYILKMFIGGLNWETTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKT 79
Query: 121 METAL 125
+ T +
Sbjct: 80 VNTVM 84
>gi|380814242|gb|AFE78995.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
gi|383419605|gb|AFH33016.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 425
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 181 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 239
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 240 QKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 299
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 300 CARRALEQLNGFELAGRPMRV 320
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 273 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 320
>gi|17063213|gb|AAL32373.1| transcription coactivator CAPER [Mus musculus]
Length = 530
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RSRG A+V V I L G+ LG + V S K + A
Sbjct: 184 MISDRNSRRSRGIAYVEFVDVSSVRLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 242
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 243 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 302
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 303 CAKKALEQLNGFELAGRPMKV 323
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 276 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|406959178|gb|EKD86596.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 81
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 56/78 (71%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG+L W+V L + F + GNVV A+V+ D E+GRSRG+GFV ST E + A+++L
Sbjct: 1 MFVGSLPWAVDDAKLAELFAQAGNVVSAQVVKDRETGRSRGFGFVEMSTDEEAQNAVKNL 60
Query: 129 NGVELEGRAMRVSLAQGR 146
NG ++EGR + V++A+ R
Sbjct: 61 NGTDVEGRKIVVNIARPR 78
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK 56
V+ DRETGRSRGF FV MST E+ ++NL+G + GR + VN + +P+
Sbjct: 30 VVKDRETGRSRGFGFVEMSTDEEAQNAVKNLNGTDVEGRKIVVNIA-RPR 78
>gi|196009388|ref|XP_002114559.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
gi|190582621|gb|EDV22693.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
Length = 292
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
E G + + FV + ++ ++G + R ++VN++ + + +FV
Sbjct: 39 EHGGNDPYGFVEYAEKNSAARALDAMNGYSFGSRAIKVNWATNSSMRKDT---NHYHIFV 95
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS + T L AF ++G+V ARV+ D +G+ RGYGFV Y K E E A++S+NG
Sbjct: 96 GDLSPDIDTTLLRSAFNQFGHVSDARVVKDSATGKPRGYGFVSYQFKHEAENAMQSMNGA 155
Query: 132 ELEGRAMRVSLA 143
L GR +R + A
Sbjct: 156 WLGGRNIRTNWA 167
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 26/163 (15%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF---------- 51
+S V+ D TG+ RG+ FV+ + +++++G GR +R N+
Sbjct: 117 VSDARVVKDSATGKPRGYGFVSYQFKHEAENAMQSMNGAWLGGRNIRTNWATRKPGATTN 176
Query: 52 ---SDKPKPKLPLYAET-------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD 101
SD K Y E + ++VGNLS T E+L + F +G + RV D
Sbjct: 177 RQNSDSSSTKSLNYDEIYLQTAVYNCTVYVGNLSAGTTEETLRRIFIPFGPIADIRVFPD 236
Query: 102 GESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+ Y F+ Y + A+ ++G +EG ++ S +
Sbjct: 237 ------KNYAFIRYMSHDHATNAIVVIHGTAVEGSQVKCSWGK 273
>gi|426376370|ref|XP_004054974.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Gorilla
gorilla gorilla]
Length = 421
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 181 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 239
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 240 QKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 299
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 300 CARRALEQLNGFELAGRPMRV 320
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 273 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 320
>gi|12803481|gb|AAH02566.1| RNA binding motif protein 23 [Homo sapiens]
gi|189055004|dbj|BAG37988.1| unnamed protein product [Homo sapiens]
gi|312151810|gb|ADQ32417.1| RNA binding motif protein 23 [synthetic construct]
Length = 424
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 181 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 239
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 240 QKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 299
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 300 CARRALEQLNGFELAGRPMRV 320
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 273 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 320
>gi|384947948|gb|AFI37579.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 425
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 181 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 239
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 240 QKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 299
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 300 CARRALEQLNGFELAGRPMRV 320
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 273 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 320
>gi|357126492|ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 54/79 (68%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LSW SL +AF +G V ARV+ D E+GRSRG+GFV +S + + + A S
Sbjct: 38 KLFVGGLSWGTNDGSLKEAFSSFGEVYEARVITDRETGRSRGFGFVEFSNEEDAKKAASS 97
Query: 128 LNGVELEGRAMRVSLAQGR 146
++G EL+GR++RV+ A R
Sbjct: 98 MDGQELDGRSVRVNFANER 116
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
V+ DRETGRSRGF FV S ED ++DG+E GR +RVNF+++
Sbjct: 68 VITDRETGRSRGFGFVEFSNEEDAKKAASSMDGQELDGRSVRVNFANE 115
>gi|400602999|gb|EJP70597.1| cutinase negative acting protein [Beauveria bassiana ARSEF 2860]
Length = 448
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 20/159 (12%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPKPKLP----- 60
V+ D+ TGRSRGF +V E E + G+E GR L +++++ KP P
Sbjct: 234 VVTDKNTGRSRGFGYVDFGDSESATKAYEAMQGQEIDGRALNLDYANAKPTEGKPQDRAA 293
Query: 61 ---------LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
L AE+D LFVGNL + +++ Q F E V R+ D +SG +G+G
Sbjct: 294 DRAKRHGDTLSAESDT-LFVGNLPFDTEQDTVRQFFSEVAEVASVRLPTDPDSGNLKGFG 352
Query: 112 FVCYSTKAEMETALESLNGVEL----EGRAMRVSLAQGR 146
+V +++ + ++AL++ NG + RA+R+ A R
Sbjct: 353 YVTFNSIEDAKSALDAKNGASIGNGRNSRAVRLDFAGSR 391
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
PK + LF G+LSW V +L +AF+ +GN+V ARV+ D +GRSRG+G+V +
Sbjct: 193 PKKAKSDDAPMTLFAGSLSWGVDDNALYEAFKSFGNIVSARVVTDKNTGRSRGFGYVDFG 252
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGR 146
A E++ G E++GRA+ + A +
Sbjct: 253 DSESATKAYEAMQGQEIDGRALNLDYANAK 282
>gi|255730137|ref|XP_002549993.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131950|gb|EER31508.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 442
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 10/150 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS----------DKPK 56
V+ +R TG+SRG+ +V + + G+E GR + ++ S D+ K
Sbjct: 246 VIMERATGKSRGYGYVDFEGKSFAEKALAEMQGKEIDGRPINLDMSTGKPHASKSNDRAK 305
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
+ LF+GNLS++ + L F EYGNV+ R+ ++ + +G+G+V +S
Sbjct: 306 QFGDSQSPPSDTLFIGNLSFNANRDGLFNTFGEYGNVISCRIPTHPDTQQPKGFGYVQFS 365
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ E + ALE+LNG +EGR R+ + R
Sbjct: 366 SVDEAKAALEALNGQYIEGRPCRLDFSAPR 395
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 52/78 (66%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVG LSW++ + L + F+ G V+GARV+ + +G+SRGYG+V + K+ E AL +
Sbjct: 217 LFVGRLSWNIDDDWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFEGKSFAEKALAEM 276
Query: 129 NGVELEGRAMRVSLAQGR 146
G E++GR + + ++ G+
Sbjct: 277 QGKEIDGRPINLDMSTGK 294
>gi|6273331|gb|AAF06329.1|AF191305_1 glycine-rich RNA binding protein, partial [Medicago sativa]
Length = 105
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 58/82 (70%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ + + FVG L+W+ ++L +AF +YG +V ++++ D E+GRSRG+GFV ++ + M
Sbjct: 2 ADVEDRCFVGGLAWATDNDALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMN 61
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
+E++NG +L+GR + V+ AQ
Sbjct: 62 DVIEAMNGQDLDGRNITVNQAQ 83
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + + N VIE ++G++ GR + VN
Sbjct: 37 IINDRETGRSRGFGFVTFANEKSMNDVIEAMNGQDLDGRNITVN 80
>gi|397473315|ref|XP_003808160.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Pan paniscus]
Length = 408
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 163 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 221
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 222 QKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 281
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 282 CARRALEQLNGFELAGRPMRV 302
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 255 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 302
>gi|291403543|ref|XP_002718110.1| PREDICTED: RNA binding motif protein 23 isoform 3 [Oryctolagus
cuniculus]
Length = 428
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 183 IISDRNSRRSKGIAYVEFCDIQAVPLAI-GLTGQRLLGVPIMVQASQAEKNRLAAMANNL 241
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 242 QKGSGGPLRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 301
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 302 CGRRALEQLNGFELAGRPMRV 322
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV-NFSDKP 55
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV + +++P
Sbjct: 275 IDNIVLMKDSDTGRSKGYGFITFSDSECGRRALEQLNGFELAGRPMRVGHVTERP 329
>gi|291403539|ref|XP_002718108.1| PREDICTED: RNA binding motif protein 23 isoform 1 [Oryctolagus
cuniculus]
Length = 410
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 165 IISDRNSRRSKGIAYVEFCDIQAVPLAI-GLTGQRLLGVPIMVQASQAEKNRLAAMANNL 223
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 224 QKGSGGPLRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 283
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 284 CGRRALEQLNGFELAGRPMRV 304
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV-NFSDKP 55
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV + +++P
Sbjct: 257 IDNIVLMKDSDTGRSKGYGFITFSDSECGRRALEQLNGFELAGRPMRVGHVTERP 311
>gi|225563097|gb|EEH11376.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus G186AR]
Length = 410
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYL-GRILRVNFSDKPKPKLP 60
+ + TV+ D TGRSRGF F+T + N V+ YL G+I+ PK +P
Sbjct: 180 VQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK---EHYLDGKII------DPKRAIP 230
Query: 61 L-YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
E K+FVG +S T + Q F ++G VV A ++ D +SGR RG+GFV + ++A
Sbjct: 231 RDEQERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEA 290
Query: 120 EMETALESLNGVELEGRAMRVSLAQGR 146
+E L +E+ G+ + V AQ R
Sbjct: 291 AVEATLSGP--LEILGKPIEVKKAQPR 315
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
K+F+G L+W T +SL F ++G V V+ DG +GRSRG+GF+ + + T +
Sbjct: 155 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVM 212
>gi|119586630|gb|EAW66226.1| RNA binding motif protein 23, isoform CRA_e [Homo sapiens]
Length = 449
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 207 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 265
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 266 QKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 325
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 326 CARRALEQLNGFELAGRPMRV 346
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 299 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 346
>gi|110681486|emb|CAL25353.1| ACBF-like dna binding protein [Platanus x acerifolia]
Length = 216
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 3/147 (2%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG--RILRVNFSDKPKPKLPLY 62
+ V+ +++TG+S G+ FV + E V++N +G + R+N++ +
Sbjct: 58 IKVIRNKQTGQSEGYGFVEFFSREAAEKVLQNYNGTAMPNTEQPFRLNWASFSMGERRSE 117
Query: 63 AETDFKLFVGNLSWSVTTESLTQAF-QEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
A +D +FVG+LS VT L + F Y +V GA+V+ D +GRS+GYGFV + E
Sbjct: 118 AGSDHSIFVGDLSSDVTDTLLQETFASRYPSVKGAKVVIDANTGRSKGYGFVRFGDDNER 177
Query: 122 ETALESLNGVELEGRAMRVSLAQGRRS 148
A+ +NG R MRV +A R+S
Sbjct: 178 SRAISEMNGAYCSNRPMRVGVATPRKS 204
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
E + ++VG+L + + L F G V+ +V+ + ++G+S GYGFV + ++ E
Sbjct: 26 EENKTIWVGDLHYWMDGNYLNNCFAHTGEVISIKVIRNKQTGQSEGYGFVEFFSREAAEK 85
Query: 124 ALESLNGVEL 133
L++ NG +
Sbjct: 86 VLQNYNGTAM 95
>gi|116734696|ref|NP_001070819.1| probable RNA-binding protein 23 isoform 1 [Homo sapiens]
gi|34925229|sp|Q86U06.1|RBM23_HUMAN RecName: Full=Probable RNA-binding protein 23; AltName:
Full=RNA-binding motif protein 23; AltName:
Full=RNA-binding region-containing protein 4; AltName:
Full=Splicing factor SF2
gi|28071058|emb|CAD61910.1| unnamed protein product [Homo sapiens]
gi|119586629|gb|EAW66225.1| RNA binding motif protein 23, isoform CRA_d [Homo sapiens]
Length = 439
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 197 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 255
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 256 QKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 315
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 316 CARRALEQLNGFELAGRPMRV 336
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 289 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 336
>gi|217071940|gb|ACJ84330.1| unknown [Medicago truncatula]
Length = 211
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%)
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ E +++ FVG L+WS + L F+++G + A+V+ D SGRSRG+GFV Y K
Sbjct: 1 MSDEDEYRCFVGGLAWSTSDRKLRDTFEKFGKLTEAKVVVDKFSGRSRGFGFVTYDEKKV 60
Query: 121 METALESLNGVELEGRAMRVSLAQ 144
ME A++++NG++L+GR + V AQ
Sbjct: 61 MEDAIDAMNGIDLDGRTITVDRAQ 84
>gi|116734694|ref|NP_060577.3| probable RNA-binding protein 23 isoform 2 [Homo sapiens]
gi|18848317|gb|AAH24208.1| RNA binding motif protein 23 [Homo sapiens]
gi|119586627|gb|EAW66223.1| RNA binding motif protein 23, isoform CRA_b [Homo sapiens]
gi|119586633|gb|EAW66229.1| RNA binding motif protein 23, isoform CRA_b [Homo sapiens]
Length = 423
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 181 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 239
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 240 QKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 299
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 300 CARRALEQLNGFELAGRPMRV 320
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 273 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 320
>gi|402854031|ref|XP_003891684.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Papio anubis]
Length = 631
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|402854029|ref|XP_003891683.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Papio anubis]
Length = 644
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|358059890|dbj|GAA94320.1| hypothetical protein E5Q_00970 [Mixia osmundae IAM 14324]
Length = 173
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 52/79 (65%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG L+W+ T +SL AF +YG V V+ D E+GRSRG+GFV S A E A+E+
Sbjct: 22 KLFVGGLAWATTDDSLFSAFSQYGEVTDCIVMKDRETGRSRGFGFVTMSDPAAAEQAIEA 81
Query: 128 LNGVELEGRAMRVSLAQGR 146
LN +L+GR +RV A R
Sbjct: 82 LNNGDLDGRQVRVDKAADR 100
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ V+ DRETGRSRGF FVTMS IE L+ + GR +RV+
Sbjct: 47 VTDCIVMKDRETGRSRGFGFVTMSDPAAAEQAIEALNNGDLDGRQVRVD 95
>gi|332248415|ref|XP_003273359.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|383411101|gb|AFH28764.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
gi|384941236|gb|AFI34223.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
Length = 644
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|397473313|ref|XP_003808159.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Pan paniscus]
Length = 442
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 197 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 255
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 256 QKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 315
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 316 CARRALEQLNGFELAGRPMRV 336
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 289 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 336
>gi|397473311|ref|XP_003808158.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Pan paniscus]
Length = 426
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 181 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 239
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 240 QKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 299
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 300 CARRALEQLNGFELAGRPMRV 320
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 273 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 320
>gi|297814870|ref|XP_002875318.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321156|gb|EFH51577.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 57/81 (70%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ +++ F+G L+WS + L AF++YG++V A+V+ D SGRSRG+GF+ + K M+
Sbjct: 4 DPEYRCFIGGLAWSTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDE 63
Query: 124 ALESLNGVELEGRAMRVSLAQ 144
A+ ++NG++L+GR + V AQ
Sbjct: 64 AIAAMNGMDLDGRTITVDKAQ 84
>gi|359475330|ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
vinifera]
Length = 162
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 59/82 (71%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AE +++ FVG L+W+ +SL +AF ++G ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 4 AEIEYRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMR 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT S+ + IE ++G+ GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGQNLDGRNITVN 82
>gi|90704785|dbj|BAE92287.1| putative glycine-rich RNA binding protein [Cryptomeria japonica]
Length = 181
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 55/82 (67%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +F+ FVG LSWS SL AF +G V+ ++V+ D E+GRSRG+GFV + + M
Sbjct: 4 ADVEFRCFVGGLSWSTDDRSLKDAFTAFGEVMDSKVVSDRETGRSRGFGFVTFMDEQSMR 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG +L+GR + V+ AQ
Sbjct: 64 DAIEGMNGRDLDGRNITVNRAQ 85
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
V+ DRETGRSRGF FVT + IE ++GR+ GR + VN
Sbjct: 39 VVSDRETGRSRGFGFVTFMDEQSMRDAIEGMNGRDLDGRNITVN 82
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+T + + FV A + ++GR+ +G+ ++VN++ P + F +FV
Sbjct: 41 DTAGNDPYCFVEFYDHRHAAASLAAMNGRKIMGKEVKVNWATTPTSQK-KDTSNHFHVFV 99
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS +TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A++ + G
Sbjct: 100 GDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQ 159
Query: 132 ELEGRAMRVSLA 143
L GR +R + A
Sbjct: 160 WLGGRQIRTNWA 171
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK--PKPK- 58
+S V+ D TG+S+G+ FV+ D I+++ G+ GR +R N++ + P PK
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKT 180
Query: 59 --------------LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
+ + ++ ++ G +S +T + + Q F +G ++ RV D
Sbjct: 181 TYESNSKHLSFEEVMSQSSPSNCTVYCGGVSSGLTEQLMRQTFSAFGQIMEVRVFPD--- 237
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +++ A+ S+NG ++G ++
Sbjct: 238 ---KGYSFVRFNSHESAAHAIVSVNGTSIDGHVVK 269
>gi|330933733|ref|XP_003304275.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
gi|311319203|gb|EFQ87630.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Query: 16 SRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGN 73
S+GF FV + L+GR +RVN++ + F +FVG+
Sbjct: 127 SKGFNYGFVEYDDPGAAERGMATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNHFHIFVGD 186
Query: 74 LSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVEL 133
LS V E L QAF +G V ARV++D ++GRSRGYGFV + +A+ + AL S++G L
Sbjct: 187 LSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRADADRALSSMDGEWL 246
Query: 134 EGRAMRVSLAQGR 146
RA+R + A +
Sbjct: 247 GSRAIRCNWANQK 259
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + + ++DG E+LG R +R N+++ K +P +
Sbjct: 206 VSEARVMWDMKTGRSRGYGFVAFRDRADADRALSSMDG-EWLGSRAIRCNWANQKGQPSI 264
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ + L
Sbjct: 265 SQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVSQTPAWQTTCYVGNLTPYTSQSDLVP 324
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G V R D RG+ F+ T A+ LNG + GR ++ S +
Sbjct: 325 LFQNFGYVTETRFQSD------RGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 378
Query: 146 R 146
R
Sbjct: 379 R 379
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD----GESGRSRG--YGFVCYSTKAEME 122
L+VG L VT + L Q F+ G+V +++ D S S+G YGFV Y E
Sbjct: 85 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGAAE 144
Query: 123 TALESLNGVELEGRAMRVSLA 143
+ +LNG + +RV+ A
Sbjct: 145 RGMATLNGRRIHNNEIRVNWA 165
>gi|332248417|ref|XP_003273360.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|383411099|gb|AFH28763.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
gi|384941234|gb|AFI34222.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
Length = 631
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|351723185|ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
gi|255627057|gb|ACU13873.1| unknown [Glycine max]
Length = 143
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLF+G LS+ V +SL AF +G+VV A+V+ D +SGRSRG+GFV +S +AL +
Sbjct: 37 KLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSA 96
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
++G +L GR++RVS A + S
Sbjct: 97 MDGKDLNGRSIRVSYANDKPS 117
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-DKP 55
V+ DR++GRSRGF FV S E ++ + +DG++ GR +RV+++ DKP
Sbjct: 67 VITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLNGRSIRVSYANDKP 116
>gi|426215230|ref|XP_004001877.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Ovis aries]
Length = 631
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|426215228|ref|XP_004001876.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Ovis aries]
Length = 644
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|426215226|ref|XP_004001875.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Ovis aries]
Length = 660
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|139948570|ref|NP_001077193.1| polyadenylate-binding protein 4 [Bos taurus]
gi|134024563|gb|AAI34510.1| PABPC4 protein [Bos taurus]
gi|296488909|tpg|DAA31022.1| TPA: poly A binding protein, cytoplasmic 4 [Bos taurus]
Length = 645
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|290997888|ref|XP_002681513.1| predicted protein [Naegleria gruberi]
gi|284095137|gb|EFC48769.1| predicted protein [Naegleria gruberi]
Length = 292
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 88/158 (55%), Gaps = 16/158 (10%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYL---GRILRVNFSDKPKPK 58
++ + ++ DR TG+S G+ FV +++E AV+E+ G+ +I R+N++ + +
Sbjct: 29 INSVKIIKDRNTGKSIGYGFVEFASIEIAKAVLESYAGKPIPTLPNKIYRLNWAAQNQGS 88
Query: 59 LPLYA------------ETDFKLFVGNLSWSVTTESLTQAFQE-YGNVVGARVLYDGESG 105
PL++ E +FVG+L+ V L Q F+ Y +V GA+V+ D +SG
Sbjct: 89 NPLFSSQPGGKPSSGGKENIVSIFVGDLAPDVNDYMLEQTFRNRYPSVRGAKVVMDPKSG 148
Query: 106 RSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
S+GYGFV ++ + +M ++ + GV + R +++S A
Sbjct: 149 ISKGYGFVKFADEDDMMRSMTEMQGVYISSRPVKISHA 186
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV-----NFSDK------- 54
V+ D ++G S+G+ FV + +D + + G R +++ NF +
Sbjct: 141 VVMDPKSGISKGYGFVKFADEDDMMRSMTEMQGVYISSRPVKISHATNNFKSQGALEDLM 200
Query: 55 PKPKL---PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
P + PL E + ++VGNLS + + L + FQ YG + ++ + G
Sbjct: 201 PTTIITTDPLEQE-NTTVYVGNLSPNTDEKILREFFQGYGPITSVKIPTNSNCG------ 253
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVS 141
F+ ++ E A+ +NG+E++G +RVS
Sbjct: 254 FINFTRTEHAERAIIEMNGIEIQGNRVRVS 283
>gi|297741463|emb|CBI32594.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 59/82 (71%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
AE +++ FVG L+W+ +SL +AF ++G ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 4 AEIEYRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMR 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT S+ + IE ++G+ GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGQNLDGRNITVN 82
>gi|119586626|gb|EAW66222.1| RNA binding motif protein 23, isoform CRA_a [Homo sapiens]
Length = 483
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 241 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 299
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 300 QKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 359
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 360 CARRALEQLNGFELAGRPMRV 380
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 333 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 380
>gi|380748929|ref|NP_001244132.1| nucleolysin TIAR isoform 2 [Gallus gallus]
gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus]
Length = 372
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+T + + FV + + ++GR+ +G+ ++VN++ P + F +FV
Sbjct: 41 DTAGNDPYCFVEFYEHRHAASALAAMNGRKIMGKEVKVNWATTPSSQKKD-TSNHFHVFV 99
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS +TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A++ + G
Sbjct: 100 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 159
Query: 132 ELEGRAMRVSLA 143
L GR +R + A
Sbjct: 160 WLGGRQIRTNWA 171
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK--PKPKL 59
+S V+ D TG+S+G+ FV+ D I+ + G+ GR +R N++ + P PK
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 60 PLYAET---------------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
+ T + ++ G ++ +T + + Q F +G ++ RV D
Sbjct: 181 TYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD--- 237
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +++ A+ S+NG +EG ++
Sbjct: 238 ---KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVK 269
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNLS VT + Q F + G +++ D + + Y FV + +AL ++
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAASALAAM 66
Query: 129 NGVELEGRAMRVSLA 143
NG ++ G+ ++V+ A
Sbjct: 67 NGRKIMGKEVKVNWA 81
>gi|119586634|gb|EAW66230.1| RNA binding motif protein 23, isoform CRA_h [Homo sapiens]
Length = 467
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G+ LG + V S K +L A
Sbjct: 225 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNL 283
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 284 QKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 343
Query: 120 EMETALESLNGVELEGRAMRV 140
ALE LNG EL GR MRV
Sbjct: 344 CARRALEQLNGFELAGRPMRV 364
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR +RV
Sbjct: 317 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 364
>gi|58266842|ref|XP_570577.1| mRNA catabolism, nonsense-mediated-related protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134110468|ref|XP_776061.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258729|gb|EAL21414.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226810|gb|AAW43270.1| mRNA catabolism, nonsense-mediated-related protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 434
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 76/128 (59%), Gaps = 7/128 (5%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS---DKPKPKLPLYAETDFKLFVGNLS 75
+ FV + + + + L+GR+ +RVN++ ++ K + + +FVG+LS
Sbjct: 66 YGFVEYADMRSADQALTTLNGRKIFDAEIRVNWAYQGNQNKED----TQHHYHVFVGDLS 121
Query: 76 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 135
V + L++AF +G++ ARV++D SG+SRGYGF+ + KA+ E A+ S+NG L
Sbjct: 122 PEVNDDVLSKAFGAFGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGS 181
Query: 136 RAMRVSLA 143
RA+RV+ A
Sbjct: 182 RAIRVNWA 189
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSR-GYGFVCY 115
PK P L+VGNLS VT LT+ F G VV A+++ D YGFV Y
Sbjct: 19 PKRP-------HLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFNYGFVEY 71
Query: 116 STKAEMETALESLNGVELEGRAMRVSLA-QGRRS 148
+ + AL +LNG ++ +RV+ A QG ++
Sbjct: 72 ADMRSADQALTTLNGRKIFDAEIRVNWAYQGNQN 105
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSDK 54
LS+ V++D +G+SRG+ F++ D I +++G E+LG R +RVN++++
Sbjct: 139 LSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNG-EWLGSRAIRVNWANQ 191
>gi|325093053|gb|EGC46363.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H88]
Length = 687
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYL-GRILRVNFSDKPKPKLP 60
+ + TV+ D TGRSRGF F+T + N V+ YL G+I+ PK +P
Sbjct: 180 VQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK---EHYLDGKII------DPKRAIP 230
Query: 61 L-YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
E K+FVG +S T + Q F ++G VV A ++ D +SGR RG+GFV + ++A
Sbjct: 231 RDEQERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEA 290
Query: 120 EMETALESLNGVELEGRAMRVSLAQGR 146
+E L +E+ G+ + V AQ R
Sbjct: 291 AVEATLSG--PLEILGKPIEVKKAQPR 315
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
K+F+G L+W T +SL F ++G V V+ DG +GRSRG+GF+ + + T +
Sbjct: 155 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVM 212
>gi|402854027|ref|XP_003891682.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Papio anubis]
Length = 660
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|116783558|gb|ABK22994.1| unknown [Picea sitchensis]
Length = 157
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 75/112 (66%), Gaps = 8/112 (7%)
Query: 43 LGRILRV----NFSDKPKPKLP-LYAE---TDFKLFVGNLSWSVTTESLTQAFQEYGNVV 94
LG +L+ + S +P +P +Y+ K+FVG LS+ V ++L ++F +G+V+
Sbjct: 7 LGSLLKQSVTKHVSSRPSVYMPAIYSAFRCMSSKVFVGGLSYGVDDQTLRESFATFGDVM 66
Query: 95 GARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
A+++ D E+GRSRG+GFV +++ E A+E+++G +L+GR++RV++AQ R
Sbjct: 67 EAKIINDRETGRSRGFGFVTFASPDEANAAVEAMDGKDLQGRSIRVNIAQER 118
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDK 54
++ DRETGRSRGF FVT ++ ++ NA +E +DG++ GR +RVN + +
Sbjct: 70 IINDRETGRSRGFGFVTFASPDEANAAVEAMDGKDLQGRSIRVNIAQE 117
>gi|148666754|gb|EDK99170.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_d
[Mus musculus]
Length = 385
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 1/137 (0%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
++ D T + + FV A + ++GR+ +G+ ++VN++ P +
Sbjct: 46 MIMDVRTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQK-KDTSNH 104
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
F +FVG+LS +TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A++
Sbjct: 105 FHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 164
Query: 127 SLNGVELEGRAMRVSLA 143
+ G L GR +R + A
Sbjct: 165 QMGGQWLGGRQIRTNWA 181
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I+ + G+ GR +R N++ + P
Sbjct: 131 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 190
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E++ K ++ G ++ +T + + Q F +G ++ RV D
Sbjct: 191 TYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD--- 247
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +S+ A+ S+NG +EG ++
Sbjct: 248 ---KGYSFVRFSSHESAAHAIVSVNGTTIEGHVVK 279
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNLS VT + Q F + G +++ D + + Y FV + AL ++
Sbjct: 17 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALAAM 76
Query: 129 NGVELEGRAMRVSLA 143
NG ++ G+ ++V+ A
Sbjct: 77 NGRKIMGKEVKVNWA 91
>gi|255760009|ref|NP_001157550.1| nucleolysin TIA-1 isoform 2 [Mus musculus]
gi|28386187|gb|AAH46812.1| Tia1 protein [Mus musculus]
Length = 377
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 1/137 (0%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
++ D T + + FV A + ++GR+ +G+ ++VN++ P +
Sbjct: 38 MIMDVRTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQK-KDTSNH 96
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
F +FVG+LS +TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A++
Sbjct: 97 FHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 156
Query: 127 SLNGVELEGRAMRVSLA 143
+ G L GR +R + A
Sbjct: 157 QMGGQWLGGRQIRTNWA 173
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I+ + G+ GR +R N++ + P
Sbjct: 123 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 182
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E++ K ++ G ++ +T + + Q F +G ++ RV D
Sbjct: 183 TYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD--- 239
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +S+ A+ S+NG +EG ++
Sbjct: 240 ---KGYSFVRFSSHESAAHAIVSVNGTTIEGHVVK 271
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNLS VT + Q F + G +++ D + + Y FV + AL ++
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALAAM 68
Query: 129 NGVELEGRAMRVSLA 143
NG ++ G+ ++V+ A
Sbjct: 69 NGRKIMGKEVKVNWA 83
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/155 (32%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP--------- 57
V+ E G+SRGF FV T E+ +E L EY GR L V+ + K
Sbjct: 259 VIQTDEQGQSRGFGFVNFETHEEAQKAVETLHDSEYHGRKLFVSRAQKKAEREEELRKSY 318
Query: 58 ------KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
K+ Y + L++ NL + E L Q F+ +G++ A+V+ D E G S+G+G
Sbjct: 319 EQAKVEKMSKYQGVN--LYIKNLEDDIDDERLRQEFEPFGSITSAKVMRD-EKGTSKGFG 375
Query: 112 FVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
FVC+S+ E A+ +N + + + VSLAQ R
Sbjct: 376 FVCFSSPDEATKAVAEMNNKMIGSKPLYVSLAQRR 410
Score = 75.5 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 49/142 (34%), Positives = 75/142 (52%), Gaps = 8/142 (5%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDG------REYLGR-ILRVNFSDKPKPKLPLYAE 64
E GRS+G+ FV T E I+ ++G + Y+G I R S + + KL
Sbjct: 167 EHGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISRKASSRERQSKLEEMKA 226
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
++V NL VT + + F+++GNV A + D E G+SRG+GFV + T E + A
Sbjct: 227 QFTNIYVKNLDPEVTQDDFVKLFEQFGNVTSAVIQTD-EQGQSRGFGFVNFETHEEAQKA 285
Query: 125 LESLNGVELEGRAMRVSLAQGR 146
+E+L+ E GR + VS AQ +
Sbjct: 286 VETLHDSEYHGRKLFVSRAQKK 307
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 4/147 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + V D T RS G+A+V D +E L+ GR R+ +S + P L
Sbjct: 70 VASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQLNYSLIKGRACRIMWSQR-DPALRK 128
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
+ + +F+ NL + ++L F +GNV+ +V D E GRS+GYGFV Y T
Sbjct: 129 TGQGN--IFIKNLDEQIDNKALHDTFAAFGNVLSCKVATD-EHGRSKGYGFVHYETAEAA 185
Query: 122 ETALESLNGVELEGRAMRVSLAQGRRS 148
ETA++++NG+ L + + V R++
Sbjct: 186 ETAIKAVNGMLLNDKKVYVGHHISRKA 212
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 41/76 (53%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L +VT L + F G V RV D + RS GY +V Y A+ E ALE L
Sbjct: 46 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQL 105
Query: 129 NGVELEGRAMRVSLAQ 144
N ++GRA R+ +Q
Sbjct: 106 NYSLIKGRACRIMWSQ 121
>gi|50408254|ref|XP_456766.1| DEHA2A10010p [Debaryomyces hansenii CBS767]
gi|49652430|emb|CAG84729.1| DEHA2A10010p [Debaryomyces hansenii CBS767]
Length = 463
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 76/130 (58%), Gaps = 1/130 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA-ETDFKLFVGNLSWS 77
+AF+ + + + L+GR +++N++ + L E F +FVG+LS
Sbjct: 140 YAFIEFENTQSADMALHTLNGRIINNSEIKINWAYQSSTISSLNPDEPTFNIFVGDLSPE 199
Query: 78 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 137
V E+L ++F ++ ++ A V++D ++ RSRGYGFV + +A+ E AL+++NG + GRA
Sbjct: 200 VDDETLNKSFSKFPSLKQAHVMWDMQTSRSRGYGFVSFGQQADAELALQTMNGEWISGRA 259
Query: 138 MRVSLAQGRR 147
+R + A ++
Sbjct: 260 IRCNWASHKQ 269
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
L + V++D +T RSRG+ FV+ D ++ ++G GR +R N++
Sbjct: 215 LKQAHVMWDMQTSRSRGYGFVSFGQQADAELALQTMNGEWISGRAIRCNWA 265
>gi|301119623|ref|XP_002907539.1| nucleolin, putative [Phytophthora infestans T30-4]
gi|262106051|gb|EEY64103.1| nucleolin, putative [Phytophthora infestans T30-4]
Length = 496
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/135 (34%), Positives = 79/135 (58%), Gaps = 3/135 (2%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+ GRS G AFVT +T E A + +DG+++ GR +++ ++K K E +F+
Sbjct: 283 QNGRSSGTAFVTFATSEAAEAALA-MDGQDFGGRWMKIRTAEK-KNMFDEKPEGCTSVFI 340
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
GNLSW V ++ + F E G ++ R+ D E+G RG+G V +++ ++ A++ L G
Sbjct: 341 GNLSWDVDENTVRETFGECGEILSCRLATDRETGEFRGFGHVDFASTEAVDEAVK-LAGS 399
Query: 132 ELEGRAMRVSLAQGR 146
+ GRA+RV+ A+ R
Sbjct: 400 YVNGRAIRVNYAKSR 414
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ ++F+ L WS T + + + F G V GAR+ ++GRS G FV ++T E
Sbjct: 246 QKTLEIFIAGLPWSATEDEVKEHFAGCGEVTGARIPL--QNGRSSGTAFVTFATSEAAEA 303
Query: 124 ALESLNGVELEGRAMRVSLAQGR 146
AL +++G + GR M++ A+ +
Sbjct: 304 AL-AMDGQDFGGRWMKIRTAEKK 325
>gi|116787897|gb|ABK24684.1| unknown [Picea sitchensis]
Length = 375
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 79/151 (52%), Gaps = 14/151 (9%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIEN---LDGR--EYLGRILRVNFSDKPK 56
L+ ++ DR TG+ RGF FVT + + VIE+ LDGR E I R N S PK
Sbjct: 72 LTDSVIMKDRHTGQPRGFGFVTYADASVVDKVIEDKHILDGRTVEIKRTIPRGNTSKGPK 131
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
K K+FVG + ++T + F ++G V +++ D +GRSRG+GF+ +
Sbjct: 132 TK---------KIFVGGIPTTITEDEFKDYFSKFGKVAEHQIMQDRSTGRSRGFGFITFD 182
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGRR 147
++ +E + +EL G+ + + A+ ++
Sbjct: 183 SEQVVEEIISQGKMIELGGKQVEIKKAEPKK 213
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A + K+F+G LS S TT T+ F +YG + + ++ D +G+ RG+GFV Y+ + ++
Sbjct: 42 ASSPGKIFIGGLSRSTTTVVFTKHFSKYGELTDSVIMKDRHTGQPRGFGFVTYADASVVD 101
Query: 123 TALESLNGVELEGRAMRV 140
+E + L+GR + +
Sbjct: 102 KVIEDKH--ILDGRTVEI 117
>gi|109120204|ref|XP_001091129.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 637
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 19/148 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI---------LRVNFSDKPK 56
E+G+S+GF FV+ ED ++ ++G+E Y+GR L+ F +
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQKKVERQTELKRKFEQMKQ 285
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL + E L +AF +G + A+V+ +G GRS+G+GFVC+S
Sbjct: 286 DRITRYQVVN--LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVATKPLYVALAQ 369
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 14/139 (10%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDG------REYLGRILRVNFSDKPKPKLPLYAET-DF- 67
S+G+ FV T E IE ++G + ++GR F + + + L A+ +F
Sbjct: 137 SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGR-----FKSRKEREAELGAKAKEFP 191
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+++ N + E L F ++G + +V+ D ESG+S+G+GFV + + + A++
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 128 LNGVELEGRAMRVSLAQGR 146
+NG EL G+ + V AQ +
Sbjct: 251 MNGKELNGKHIYVGRAQKK 269
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS +A+V +D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDVITRRSSSYAYVNFQHPKDAERALDTMNFDVIKGKPVRIMWSQR-DPSLRRSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +FV NL S+ + L +GN++ +V+ D E+G S+GYGFV + T E A
Sbjct: 99 GN--IFVKNLDKSINNKVLYDTVSAFGNILSCKVVCD-ENG-SKGYGFVHFETHEAAERA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG L R + V + R+
Sbjct: 155 IEKMNGTLLNDRKVFVGRFKSRK 177
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P P Y L+VG+L VT L + F G ++ RV D + RS Y +V +
Sbjct: 3 PSTPSYPTA--SLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E AL+++N ++G+ +R+ +Q
Sbjct: 61 HPKDAERALDTMNFDVIKGKPVRIMWSQ 88
>gi|2645699|gb|AAC61787.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 165
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 58/84 (69%)
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ A+ +++ FVG L+W+ T +SL +AF YG ++ ++++ D E+GRSRG+GFV ++ +
Sbjct: 1 MSADIEYRCFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKS 60
Query: 121 METALESLNGVELEGRAMRVSLAQ 144
M A++ +N EL+GR V+ AQ
Sbjct: 61 MRDAIQGMNSQELDGRNTTVNEAQ 84
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + + I+ ++ +E GR VN
Sbjct: 38 IINDRETGRSRGFGFVTFNNEKSMRDAIQGMNSQELDGRNTTVN 81
>gi|348552998|ref|XP_003462314.1| PREDICTED: polyadenylate-binding protein 4-like isoform 3 [Cavia
porcellus]
Length = 615
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKII---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|156058654|ref|XP_001595250.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980]
gi|154701126|gb|EDO00865.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 501
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Query: 16 SRGF--AFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGN 73
S+GF FV ++ L+GR +RVN++ + F +FVG+
Sbjct: 126 SKGFNYGFVEYDDPGAAERAMQTLNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGD 185
Query: 74 LSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVEL 133
LS V E L QAF +G+V ARV++D ++GRSRGYGF + + + E AL S++G L
Sbjct: 186 LSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFAAFRERQDAEKALSSMDGEWL 245
Query: 134 EGRAMRVSLAQGR 146
RA+R + A +
Sbjct: 246 GSRAIRCNWANQK 258
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ F +D + ++DG E+LG R +R N+++ K +P +
Sbjct: 205 VSEARVMWDMKTGRSRGYGFAAFRERQDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 263
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T + L
Sbjct: 264 SQQQAMSAMGMTPTTPFGHHHFPTHGVQSYDMIVQQTPQWQTTCYVGNLTPYTTQQDLVP 323
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ FV + A+ L+G + GR ++ S +
Sbjct: 324 LFQNFGYVVETRFQAD------RGFAFVKMDSHENAALAICQLSGYNVNGRPLKCSWGKD 377
Query: 146 R 146
+
Sbjct: 378 K 378
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT E L Q F+ G+V +++ D S + YGFV Y E A+++L
Sbjct: 91 LYVGGLDPRVTEEVLRQIFETTGHVQNVKIIPDKNS-KGFNYGFVEYDDPGAAERAMQTL 149
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 150 NGRRVHQAEIRVNWA 164
>gi|355745175|gb|EHH49800.1| hypothetical protein EGM_00521 [Macaca fascicularis]
Length = 635
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 202 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQL 258
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 259 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 316
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 317 SPEEATKAVTEMNGRIVGSKPLYVALAQ 344
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 112 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 171
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 172 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 230
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 231 ISGKIIFVGRAQKK 244
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 15 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 73
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 74 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 129
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 130 IEKMNGMLLNDRKVFVGRFKSRK 152
>gi|41053728|ref|NP_957176.1| poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|37590406|gb|AAH59662.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|39645430|gb|AAH63948.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
Length = 634
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 19/148 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI---------LRVNFSDKPK 56
E G+SRGF FV+ ED ++ ++G+E Y+GR L+ F +
Sbjct: 226 ENGKSRGFGFVSFERHEDAQRAVDEMNGKEMNGKLIYVGRAQKKVERQTELKRKFEQMKQ 285
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL + E L + F +G + A+V+ DG GRS+G+GFVC+S
Sbjct: 286 DRMTRYQGVN--LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMDG--GRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVATKPLYVALAQ 369
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+ FV T E IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N + + L F +YGN + RV+ D E+G+SRG+GFV + + + A++ +NG E
Sbjct: 197 NFGEDMDDDKLKDIFSKYGNAMSIRVMTD-ENGKSRGFGFVSFERHEDAQRAVDEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 MNGKLIYVGRAQKK 269
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ GR +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPVRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GYGFV + T+ E A
Sbjct: 99 GN--IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P P Y L+VG+L VT L + F G ++ RV D + RS GY +V +
Sbjct: 3 PSAPSYPMA--SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
A+ E AL+++N ++GR +R+ +Q
Sbjct: 61 QPADAERALDTMNFDVIKGRPVRIMWSQ 88
>gi|21553972|gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabidopsis thaliana]
Length = 136
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LSW SL QAF +G V A V+ D E+GRSRG+GFV +S + A++
Sbjct: 36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
++G EL GR +RV+LA R S
Sbjct: 96 MDGKELNGRQIRVNLATERSS 116
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
+++ TV+ DRETGRSRGF FV+ S + N I+ +DG+E GR +RVN +
Sbjct: 61 VTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLA 111
>gi|332248413|ref|XP_003273358.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|355557859|gb|EHH14639.1| hypothetical protein EGK_00600 [Macaca mulatta]
gi|383411103|gb|AFH28765.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
gi|384941238|gb|AFI34224.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
Length = 660
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|297283068|ref|XP_001113342.2| PREDICTED: polyadenylate-binding protein 4 [Macaca mulatta]
Length = 657
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 224 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQL 280
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 281 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 338
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 339 SPEEATKAVTEMNGRIVGSKPLYVALAQ 366
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|351725105|ref|NP_001235801.1| uncharacterized protein LOC100305467 [Glycine max]
gi|255625591|gb|ACU13140.1| unknown [Glycine max]
Length = 156
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 58/82 (70%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ FVG L+W+ L +AF +YG+VV ++++ D E+GRSRG+GFV ++++ M
Sbjct: 4 ADVEYRCFVGGLAWATDNYDLEKAFSQYGDVVESKIINDRETGRSRGFGFVTFASEDSMR 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT ++ + IE ++G+ GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFASEDSMRDAIEGMNGQNLDGRNITVN 82
>gi|168036414|ref|XP_001770702.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678063|gb|EDQ64526.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 165
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 56/79 (70%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+F+ FVG LSW+ T + L + F+ +GNV+ A+V+ D E+G SRG+GFV + + ME A+
Sbjct: 6 EFRCFVGGLSWNTTDKGLEEEFRHFGNVLEAKVIVDKETGHSRGFGFVNFGDERSMEEAI 65
Query: 126 ESLNGVELEGRAMRVSLAQ 144
E L+G EL+GR + V+ A+
Sbjct: 66 ERLHGKELDGRPITVNRAK 84
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 58
V+ D+ETG SRGF FV IE L G+E GR + VN + KPK
Sbjct: 38 VIVDKETGHSRGFGFVNFGDERSMEEAIERLHGKELDGRPITVN---RAKPK 86
>gi|441599875|ref|XP_004087575.1| PREDICTED: nucleolysin TIAR isoform 2 [Nomascus leucogenys]
gi|441599878|ref|XP_003255076.2| PREDICTED: nucleolysin TIAR isoform 1 [Nomascus leucogenys]
gi|119569773|gb|EAW49388.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_d [Homo sapiens]
Length = 353
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 86
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 87 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 146
Query: 139 RVSLA 143
R + A
Sbjct: 147 RTNWA 151
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 101 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 160
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 161 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 217
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 218 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 249
>gi|402079107|gb|EJT74372.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 482
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/129 (35%), Positives = 73/129 (56%), Gaps = 1/129 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD-FKLFVGNLSWS 77
+ FV + ++ L+GR +RVN++ + ++ F +FVG+LS
Sbjct: 129 YGFVEYDDPGAADRAMQTLNGRRVHQSEIRVNWAYQSANTTTKEDTSNHFHIFVGDLSNE 188
Query: 78 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 137
V E LTQAF +G+V ARV++D ++GRSRGYGFV + + + E AL S++G L RA
Sbjct: 189 VNDEVLTQAFSVFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRA 248
Query: 138 MRVSLAQGR 146
+R + A +
Sbjct: 249 IRCNWANQK 257
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 43/183 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 204 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 262
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + +++ +VGNL+ T L
Sbjct: 263 AQQQAMQAMGMTPTTPYGHHHFPTHGMQSYEMVLNQTPAYQTTCYVGNLTPYTTANDLVP 322
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ T +A+ +LNG + GR ++ S +
Sbjct: 323 LFQNFGYVVESRFQSD------RGFAFIKMDTHENATSAICNLNGYNVNGRPLKCSWGKD 376
Query: 146 RRS 148
+ +
Sbjct: 377 KNT 379
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y + A+++L
Sbjct: 89 LYVGGLDARVTEDVLRQIFETTGHVQNVKIIPD-KNAKGFNYGFVEYDDPGAADRAMQTL 147
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 148 NGRRVHQSEIRVNWA 162
>gi|156346232|ref|XP_001621481.1| hypothetical protein NEMVEDRAFT_v1g76367 [Nematostella vectensis]
gi|156207460|gb|EDO29381.1| predicted protein [Nematostella vectensis]
Length = 88
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 60 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
P AE K ++GNLS+SV ++L F Y NVV ++ D E+GR RG+GFV + +K
Sbjct: 2 PEMAEN--KCYIGNLSYSVDEQALEDKFHGY-NVVDVNIITDRETGRPRGFGFVTFGSKE 58
Query: 120 EMETALESLNGVELEGRAMRVSLAQGR 146
EME A++ +G +L+GR M+V+ AQ R
Sbjct: 59 EMEKAIDEFDGQDLDGRPMKVNKAQPR 85
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
+ ++ DRETGR RGF FVT + E+ I+ DG++ GR ++VN
Sbjct: 35 VNIITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVN 80
>gi|829254|emb|CAA49174.1| glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 139
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLF+G LSW SL AF +G+VV A+V+ D E+GRSRG+GFV ++ + A+
Sbjct: 17 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 76
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
++G EL GR +RV+ A R S
Sbjct: 77 MDGKELNGRHIRVNPANDRPS 97
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
V+ DRETGRSRGF FV + A I +DG+E GR +RVN ++ +P P
Sbjct: 47 VIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAND-RPSAP 99
>gi|195621182|gb|ACG32421.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 4 SDVEYRCFVGXLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
+A+E +NG EL+GR + V+ AQ
Sbjct: 64 SAIEGMNGKELDGRNITVNEAQ 85
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRET RSRGF FVT ST + + IE ++G+E GR + VN
Sbjct: 39 IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVN 82
>gi|15229525|ref|NP_189025.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|30687226|ref|NP_850629.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|9294652|dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana]
gi|17979516|gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|20453303|gb|AAM19890.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|332643298|gb|AEE76819.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|332643299|gb|AEE76820.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
Length = 136
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LSW SL QAF +G V A V+ D E+GRSRG+GFV +S + A++
Sbjct: 36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
++G EL GR +RV+LA R S
Sbjct: 96 MDGKELNGRQIRVNLATERSS 116
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
+++ TV+ DRETGRSRGF FV+ S + N I+ +DG+E GR +RVN +
Sbjct: 61 VTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLA 111
>gi|417410268|gb|JAA51610.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 382
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 56 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 114
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 115 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 174
Query: 139 RVSLA 143
R + A
Sbjct: 175 RTNWA 179
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 129 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 188
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 189 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 245
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 246 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 277
>gi|355562824|gb|EHH19418.1| hypothetical protein EGK_20118, partial [Macaca mulatta]
gi|355766617|gb|EHH62534.1| hypothetical protein EGM_20905, partial [Macaca fascicularis]
gi|440900070|gb|ELR51281.1| Nucleolysin TIAR, partial [Bos grunniens mutus]
Length = 381
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 56 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 114
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 115 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 174
Query: 139 RVSLA 143
R + A
Sbjct: 175 RTNWA 179
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 129 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 188
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 189 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 245
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 246 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 277
>gi|119569772|gb|EAW49387.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Homo sapiens]
Length = 336
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 69
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 70 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 129
Query: 139 RVSLA 143
R + A
Sbjct: 130 RTNWA 134
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 84 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 143
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 144 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 200
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 201 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 232
>gi|417410125|gb|JAA51540.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 367
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 41 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 99
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 100 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 159
Query: 139 RVSLA 143
R + A
Sbjct: 160 RTNWA 164
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 114 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 173
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 174 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 230
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 231 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 262
>gi|297274127|ref|XP_002800732.1| PREDICTED: polyadenylate-binding protein 1 [Macaca mulatta]
Length = 605
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 19/148 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI---------LRVNFSDKPK 56
E+G+S+GF FV+ ED ++ ++G+E Y+GR L+ F +
Sbjct: 194 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQKKVERQTELKRKFEQMKQ 253
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL + E L +AF +G + A+V+ +G GRS+G+GFVC+S
Sbjct: 254 DRITRYQVVN--LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFS 309
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 310 SPEEATKAVTEMNGRIVATKPLYVALAQ 337
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 14/139 (10%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDG------REYLGRILRVNFSDKPKPKLPLYAET-DF- 67
S+G+ FV T E IE ++G + ++GR F + + + L A+ +F
Sbjct: 105 SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGR-----FKSRKEREAELGAKAKEFP 159
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+++ N + E L F ++G + +V+ D ESG+S+G+GFV + + + A++
Sbjct: 160 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDE 218
Query: 128 LNGVELEGRAMRVSLAQGR 146
+NG EL G+ + V AQ +
Sbjct: 219 MNGKELNGKHIYVGRAQKK 237
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P P Y L+VG+L VT L + F G ++ RV D + RS Y +V +
Sbjct: 3 PSTPSYPTA--SLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E AL+++N ++G+ +R+ +Q
Sbjct: 61 HPKDAERALDTMNFDVIKGKPVRIMWSQ 88
>gi|126273033|ref|XP_001367857.1| PREDICTED: nucleolysin TIAR isoform 1 [Monodelphis domestica]
Length = 388
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 66 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 124
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 125 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 184
Query: 139 RVSLA 143
R + A
Sbjct: 185 RTNWA 189
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 139 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 198
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 199 TQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 255
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 256 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 287
>gi|114649018|ref|XP_001154541.1| PREDICTED: polyadenylate-binding protein 3 isoform 5 [Pan
troglodytes]
Length = 633
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 19/148 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI---------LRVNFSDKPK 56
E+G+S+GF FV+ ED ++ ++G+E Y+GR L+ F +
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQ 285
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL + E L +AF +G + A+V+ +G GRS+G+GFVC+S
Sbjct: 286 DRITRYQVVN--LYVKNLDDDIDDERLQKAFSPFGTITSAKVMMEG--GRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVATKPLYVALAQ 369
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV-NFSDKPKPKLPLYAET-DF-KLFVG 72
S+G+ FV T E IE ++G GR + V F + + + L A +F +++
Sbjct: 137 SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N + E L F ++G + +V+ D ESG+S+G+GFV + + + A++ +NG E
Sbjct: 197 NFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
L G+ + V AQ +
Sbjct: 256 LNGKQIYVGRAQKK 269
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T S +A+V +D ++ ++ G+ LR+ +S + P L
Sbjct: 40 IRVCRDLITRGSSNYAYVNFQHPKDAEHALDTMNFDVIKGKPLRIMWSQR-DPSLRKSGM 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +FV NL S+ ++L +GN++ V+ D E+G S+GYGFV + T E A
Sbjct: 99 GN--IFVKNLDKSINNKALYDTVSAFGNILSCNVVCD-ENG-SKGYGFVHFETHEAAERA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L GR + V + R+
Sbjct: 155 IEKMNGMLLNGRKVFVGQFKSRK 177
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P P Y L+VG+L VT L + F G ++ RV D + S Y +V +
Sbjct: 3 PSTPSYPTA--SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E AL+++N ++G+ +R+ +Q
Sbjct: 61 HPKDAEHALDTMNFDVIKGKPLRIMWSQ 88
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LS+ SL +AF +YG+V+ ARV+ D ++GRSRG+GF+ + + E +AL++
Sbjct: 41 KLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASALQA 100
Query: 128 LNGVELEGRAMRVSLAQGRR 147
++G +L GR +RV+ A +R
Sbjct: 101 MDGQDLHGRRIRVNYATEKR 120
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
V+ DR+TGRSRGF F++ + E+ + ++ +DG++ GR +RVN++
Sbjct: 71 VIMDRDTGRSRGFGFISFPSSEEAASALQAMDGQDLHGRRIRVNYA 116
>gi|82802751|gb|ABB92426.1| PABP3 [Pan troglodytes]
Length = 632
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 19/148 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI---------LRVNFSDKPK 56
E+G+S+GF FV+ ED ++ ++G+E Y+GR L+ F +
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQ 285
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL + E L +AF +G + A+V+ +G GRS+G+GFVC+S
Sbjct: 286 DRITRYQVVN--LYVKNLDDDIDDERLQKAFSPFGTITSAKVMMEG--GRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVATKPLYVALAQ 369
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV-NFSDKPKPKLPLYAET-DF-KLFVG 72
S+G+ FV T E IE ++G GR + V F + + + L A +F +++
Sbjct: 137 SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N + E L F ++G + +V+ D ESG+S+G+GFV + + + A++ +NG E
Sbjct: 197 NFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
L G+ + V AQ +
Sbjct: 256 LNGKQIYVGRAQKK 269
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T S +A+V +D ++ ++ G+ LR+ +S + P L
Sbjct: 40 IRVCRDLITRGSSNYAYVNFQHPKDAEHALDTMNFDVIKGKPLRIMWSQR-DPSLRKSGM 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +FV NL S+ ++L +GN++ V+ D E+G S+GYGFV + T E A
Sbjct: 99 GN--IFVKNLDKSINNKALYDTVSAFGNILSCNVVCD-ENG-SKGYGFVHFETHEAAERA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L GR + V + R+
Sbjct: 155 IEKMNGMLLNGRKVFVGQFKSRK 177
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P P Y L+VG+L VT L + F G ++ RV D + S Y +V +
Sbjct: 3 PSTPSYPTA--SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E AL+++N ++G+ +R+ +Q
Sbjct: 61 HPKDAEHALDTMNFDVIKGKPLRIMWSQ 88
>gi|45383446|ref|NP_989687.1| nucleolysin TIAR isoform 1 [Gallus gallus]
gi|28883275|gb|AAO49721.1| TIAR [Gallus gallus]
Length = 388
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 66 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 124
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 125 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 184
Query: 139 RVSLA 143
R + A
Sbjct: 185 RTNWA 189
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 139 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 198
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 199 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 255
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 256 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 287
>gi|395501989|ref|XP_003755369.1| PREDICTED: nucleolysin TIAR [Sarcophilus harrisii]
Length = 392
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 70 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 128
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 129 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 188
Query: 139 RVSLA 143
R + A
Sbjct: 189 RTNWA 193
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 143 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 202
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 203 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 259
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 260 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 291
>gi|194693774|gb|ACF80971.1| unknown [Zea mays]
Length = 133
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 4 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
+A+E +NG EL+GR + V+ AQ
Sbjct: 64 SAIEGMNGKELDGRNITVNEAQ 85
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRET RSRGF FVT ST + + IE ++G+E GR + VN
Sbjct: 39 IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVN 82
>gi|388578824|gb|EIM19158.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 430
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
V DR++GRSRGF +V + E ++ G+E GR +RV+ S P+ P
Sbjct: 236 VQLDRQSGRSRGFGYVEFESHELAVKAMDQFAGKEIDGRPVRVDLS-VPRAPNPEKRAKS 294
Query: 67 F---------KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
F LF+GNLS++ + + + F E+G+V RV D E+G +G+G+V ++
Sbjct: 295 FGDQRSDPSNTLFIGNLSFNTNEDRVWEFFGEFGSVESVRVPTDRETGAPKGFGYVSFAD 354
Query: 118 KAEMETALESLNGVELEGRAMRVSLA 143
+ A++ G EL+GR +R+ +
Sbjct: 355 VDTAKAAIDGAAGSELDGRVIRLDFS 380
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
++FVG LSW++ + L F++ G V ARV D +SGRSRG+G+V + + A++
Sbjct: 206 QIFVGQLSWNIDDDWLKSEFEQLGPVKTARVQLDRQSGRSRGFGYVEFESHELAVKAMDQ 265
Query: 128 LNGVELEGRAMRVSLAQGR 146
G E++GR +RV L+ R
Sbjct: 266 FAGKEIDGRPVRVDLSVPR 284
>gi|355754577|gb|EHH58478.1| hypothetical protein EGM_08341 [Macaca fascicularis]
Length = 637
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 19/148 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI---------LRVNFSDKPK 56
E+G+S+GF FV+ ED ++ ++G+E Y+GR L+ F +
Sbjct: 226 ESGKSKGFGFVSFERHEDARKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQ 285
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL + E L +AF +G + A+V+ +G GRS+G+GFVC+S
Sbjct: 286 DRITRYQVVN--LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVATKPLYVALAQ 369
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS +A+V +D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDVITRRSSSYAYVNFQHPKDAERALDTMNFDVIKGKPVRIMWSQR-DPSLRRSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +FV NL S+ + L +GN++ +V+ D E+G S+GYGFV + T E A
Sbjct: 99 GN--IFVKNLDKSINNKVLYDTVSAFGNILSCKVVCD-ENG-SKGYGFVHFETHEAAERA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG L R + V + R+
Sbjct: 155 IEKMNGTLLNDRKVFVGRFKSRK 177
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P P Y L+VG+L VT L + F G ++ RV D + RS Y +V +
Sbjct: 3 PSTPSYPTA--SLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E AL+++N ++G+ +R+ +Q
Sbjct: 61 HPKDAERALDTMNFDVIKGKPVRIMWSQ 88
>gi|348552994|ref|XP_003462312.1| PREDICTED: polyadenylate-binding protein 4-like isoform 1 [Cavia
porcellus]
Length = 660
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKII---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|344255843|gb|EGW11947.1| Nucleolysin TIAR [Cricetulus griseus]
Length = 353
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 86
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 87 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 146
Query: 139 RVSLA 143
R + A
Sbjct: 147 RTNWA 151
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 101 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 160
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
ET+ K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 161 TQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 217
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 218 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 249
>gi|82802761|gb|ABB92431.1| PABP3 [Aotus trivirgatus]
Length = 629
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 19/148 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI---------LRVNFSDKPK 56
E+G+S+GF FV+ ED ++ ++G+E Y+GR L+ F +
Sbjct: 226 ESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQ 285
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL + E L +AF +G + A+V+ +G GRS+G+GFVC+S
Sbjct: 286 DRITRYQVVN--LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVATKPLYVALAQ 369
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 14/139 (10%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDG------REYLGRILRVNFSDKPKPKLPLYAET-DF- 67
S+G+ FV T E IE ++G + ++GR F + + + L A+ +F
Sbjct: 137 SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGR-----FKSRKEREAELGAKAKEFP 191
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+++ N + E L F ++G + +V+ D ESG+S+G+GFV + + + A++
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFEKHEDAQKAVDE 250
Query: 128 LNGVELEGRAMRVSLAQGR 146
+NG EL G+ + V AQ +
Sbjct: 251 MNGKELSGKQIYVGRAQKK 269
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS +A+V +D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDLITRRSSNYAYVNFQHPKDAEHALDTMNFDVIKGKPVRIMWS-QHDPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +FV NL S+ ++L +GN++ +V+ D E+G S+GYGFV + T E A
Sbjct: 99 GN--IFVKNLDKSINNKALYDTVSAFGNILSCKVVCD-ENG-SKGYGFVHFETHEAAERA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P P Y L+VG+L VT L + F G ++ RV D + RS Y +V +
Sbjct: 3 PSTPSYPTA--SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E AL+++N ++G+ +R+ +Q
Sbjct: 61 HPKDAEHALDTMNFDVIKGKPVRIMWSQ 88
>gi|348553000|ref|XP_003462315.1| PREDICTED: polyadenylate-binding protein 4-like isoform 4 [Cavia
porcellus]
Length = 631
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKII---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|348552996|ref|XP_003462313.1| PREDICTED: polyadenylate-binding protein 4-like isoform 2 [Cavia
porcellus]
Length = 644
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKII---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|300796220|ref|NP_001179985.1| nucleolysin TIAR [Bos taurus]
gi|296472594|tpg|DAA14709.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Bos taurus]
Length = 380
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 50 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 108
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 109 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 168
Query: 139 RVSLA 143
R + A
Sbjct: 169 RTNWA 173
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 123 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 182
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 183 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 239
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 240 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 271
>gi|126273035|ref|XP_001367894.1| PREDICTED: nucleolysin TIAR isoform 2 [Monodelphis domestica]
Length = 371
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 49 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 107
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 108 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 167
Query: 139 RVSLA 143
R + A
Sbjct: 168 RTNWA 172
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 122 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 181
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 182 TQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 238
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 239 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 270
>gi|449282273|gb|EMC89133.1| Nucleolysin TIAR, partial [Columba livia]
Length = 378
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 56 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 114
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 115 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 174
Query: 139 RVSLA 143
R + A
Sbjct: 175 RTNWA 179
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 129 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 188
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 189 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 245
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 246 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 277
>gi|354500962|ref|XP_003512565.1| PREDICTED: nucleolysin TIAR [Cricetulus griseus]
Length = 336
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 69
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 70 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 129
Query: 139 RVSLA 143
R + A
Sbjct: 130 RTNWA 134
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 84 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 143
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
ET+ K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 144 TQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 200
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 201 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 232
>gi|77695912|ref|NP_001029097.1| nucleolysin TIAR isoform 2 [Homo sapiens]
gi|73998714|ref|XP_852319.1| PREDICTED: nucleolysin TIAR isoform 2 [Canis lupus familiaris]
gi|114633030|ref|XP_001154768.1| PREDICTED: nucleolysin TIAR isoform 6 [Pan troglodytes]
gi|311271911|ref|XP_003133244.1| PREDICTED: nucleolysin TIAR isoform 2 [Sus scrofa]
gi|338716472|ref|XP_003363459.1| PREDICTED: nucleolysin TIAR [Equus caballus]
gi|390473251|ref|XP_003734574.1| PREDICTED: nucleolysin TIAR isoform 2 [Callithrix jacchus]
gi|395827973|ref|XP_003787162.1| PREDICTED: nucleolysin TIAR isoform 1 [Otolemur garnettii]
gi|397510639|ref|XP_003825700.1| PREDICTED: nucleolysin TIAR isoform 2 [Pan paniscus]
gi|402881652|ref|XP_003904380.1| PREDICTED: nucleolysin TIAR isoform 2 [Papio anubis]
gi|426253186|ref|XP_004020281.1| PREDICTED: nucleolysin TIAR isoform 2 [Ovis aries]
gi|426366374|ref|XP_004050233.1| PREDICTED: nucleolysin TIAR isoform 2 [Gorilla gorilla gorilla]
gi|158255404|dbj|BAF83673.1| unnamed protein product [Homo sapiens]
gi|380783709|gb|AFE63730.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|383408327|gb|AFH27377.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|384942768|gb|AFI34989.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|410218476|gb|JAA06457.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257384|gb|JAA16659.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296998|gb|JAA27099.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 392
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 67 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 125
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 126 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 185
Query: 139 RVSLA 143
R + A
Sbjct: 186 RTNWA 190
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 140 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 199
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 200 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 256
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 257 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 288
>gi|82802759|gb|ABB92430.1| PABP3 [Chlorocebus sabaeus]
Length = 635
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 19/148 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI---------LRVNFSDKPK 56
E+G+S+GF FV+ ED ++ ++G+E Y+GR L+ F +
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQ 285
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL + E L +AF +G + A+V+ +G GRS+G+GFVC+S
Sbjct: 286 DRITRYQVVN--LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVATKPLYVALAQ 369
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+ FV T E IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFPNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N + E L F ++G + +V+ D ESG+S+G+GFV + + + A++ +NG E
Sbjct: 197 NFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
L G+ + V AQ +
Sbjct: 256 LNGKQIYVGRAQKK 269
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T R +A+V +D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDVITRRYSSYAYVNFQHPKDAERALDTMNFDVIKGKPVRIMWSQR-DPSLRRSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +FV NL S+ + L +GN++ +V+ D E+G S+GYGFV + T E A
Sbjct: 99 GN--IFVKNLDKSINNKVLYDTASAFGNILSCKVVCD-ENG-SKGYGFVHFETHEAAERA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P P Y L+VG+L VT L + F G ++ RV D + R Y +V +
Sbjct: 3 PSTPSYPTA--SLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRYSSYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E AL+++N ++G+ +R+ +Q
Sbjct: 61 HPKDAERALDTMNFDVIKGKPVRIMWSQ 88
>gi|406956570|gb|EKD84644.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 81
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 56/78 (71%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG+L W+V L + F + GNVV A+V+ D E+GRSRG+GFV ST E + A+++L
Sbjct: 1 MFVGSLPWAVDDAKLGEIFAQAGNVVSAQVVKDRETGRSRGFGFVEMSTDEEAQNAVKNL 60
Query: 129 NGVELEGRAMRVSLAQGR 146
NG ++EGR + V++A+ R
Sbjct: 61 NGADVEGRKIVVNIARPR 78
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPK 56
V+ DRETGRSRGF FV MST E+ ++NL+G + GR + VN + +P+
Sbjct: 30 VVKDRETGRSRGFGFVEMSTDEEAQNAVKNLNGADVEGRKIVVNIA-RPR 78
>gi|355724191|gb|AES08143.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Mustela putorius furo]
Length = 183
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 39 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEI 97
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 98 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 157
Query: 139 RVSLA 143
R + A
Sbjct: 158 RTNWA 162
>gi|297687497|ref|XP_002821249.1| PREDICTED: nucleolysin TIAR isoform 4 [Pongo abelii]
Length = 396
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 73/135 (54%), Gaps = 10/135 (7%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP---KPKLPLYAET-------DFK 68
+ FV D A + ++GR+ LG+ ++VN++ P K LP+ F
Sbjct: 50 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKILPVSTPVPNALISDHFH 109
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG+LS +TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ +
Sbjct: 110 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 169
Query: 129 NGVELEGRAMRVSLA 143
G L GR +R + A
Sbjct: 170 GGQWLGGRQIRTNWA 184
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 134 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 193
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 194 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 250
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 251 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 282
>gi|452822390|gb|EME29410.1| RNA-binding protein [Galdieria sulphuraria]
Length = 106
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 4/83 (4%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEY----GNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+LF+GNLSW ++E L +AFQ +VV A V+ D SGRSRG+GFV + + + +
Sbjct: 6 RLFIGNLSWKTSSEGLKRAFQNAIGVEASVVNAHVVMDRYSGRSRGFGFVTFESPEDAAS 65
Query: 124 ALESLNGVELEGRAMRVSLAQGR 146
A+ LNG EL+GRA+RV LA R
Sbjct: 66 AVNLLNGKELDGRAIRVDLAHER 88
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
V+ DR +GRSRGF FVT + ED + + L+G+E GR +RV+ + + + P
Sbjct: 40 VVMDRYSGRSRGFGFVTFESPEDAASAVNLLNGKELDGRAIRVDLAHEREESAP 93
>gi|359807285|ref|NP_001240860.1| uncharacterized protein LOC100815224 [Glycine max]
gi|255645181|gb|ACU23088.1| unknown [Glycine max]
Length = 208
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 55/79 (69%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+F+ F+G L+WS + L F+++G ++ A+V+ D SGRSRG+GFV + K M+ A+
Sbjct: 6 EFRCFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAI 65
Query: 126 ESLNGVELEGRAMRVSLAQ 144
+++NG++L+GR + V AQ
Sbjct: 66 DAMNGIDLDGRTITVDRAQ 84
>gi|281338083|gb|EFB13667.1| hypothetical protein PANDA_003438 [Ailuropoda melanoleuca]
Length = 340
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 56 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 114
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 115 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 174
Query: 139 RVSLA 143
R + A
Sbjct: 175 RTNWA 179
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 129 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 188
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 189 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 245
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 246 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 277
>gi|119569771|gb|EAW49386.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_b [Homo sapiens]
Length = 282
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 86
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 87 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 146
Query: 139 RVSLA 143
R + A
Sbjct: 147 RTNWA 151
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 101 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 160
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 161 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 217
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 218 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 249
>gi|335775520|gb|AEH58599.1| nucleolysin TIAR-like protein, partial [Equus caballus]
Length = 242
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 6 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 64
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 65 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 124
Query: 139 RVSLA 143
R + A
Sbjct: 125 RTNWA 129
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 79 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 138
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 139 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 195
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 196 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 227
>gi|198282085|ref|NP_001105572.1| glycine-rich RNA binding protein [Zea mays]
gi|2668742|gb|AAB88616.1| glycine-rich RNA binding protein [Zea mays]
gi|194692162|gb|ACF80165.1| unknown [Zea mays]
gi|195623052|gb|ACG33356.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 145
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 4 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
+A+E +NG EL+GR + V+ AQ
Sbjct: 64 SAIEGMNGKELDGRNITVNEAQ 85
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRET RSRGF FVT ST + + IE ++G+E GR + VN
Sbjct: 39 IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVN 82
>gi|115488680|ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|77555842|gb|ABA98638.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649334|dbj|BAF29846.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|125579440|gb|EAZ20586.1| hypothetical protein OsJ_36195 [Oryza sativa Japonica Group]
gi|215694288|dbj|BAG89281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708787|dbj|BAG94056.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 258
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%)
Query: 43 LGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDG 102
+G +L+ S P + + KLFVG LS+ +SL F YG V+ A+++ D
Sbjct: 7 IGNLLKRATSSSPALYQSIRCMSSSKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDR 66
Query: 103 ESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
E+GRSRG+GF+ Y++ E A+ +L+G +L+GR +RV+ A R
Sbjct: 67 ETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNTANER 110
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF F+T ++ E+ +A I LDG++ GR +RVN
Sbjct: 62 IINDRETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVN 105
>gi|268531322|ref|XP_002630787.1| Hypothetical protein CBG02484 [Caenorhabditis briggsae]
Length = 403
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 81/144 (56%), Gaps = 6/144 (4%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++K V++D G + +AFV S + ++ ++ R R ++VN++ +P + P
Sbjct: 68 VTKTKVIHD---GANDPYAFVEFSDHGQASQALQTMNKRLLHDREMKVNWAVEPG-QQPS 123
Query: 62 YAET--DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+T F +FVG+LS V + L +AF +G+V A+V+ D + +S+GYGFV Y +
Sbjct: 124 KIDTTRHFHVFVGDLSSEVDNQKLREAFIPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 183
Query: 120 EMETALESLNGVELEGRAMRVSLA 143
E E A+E +NG L R +R + A
Sbjct: 184 EAERAIEQMNGQWLGRRTIRTNWA 207
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 80/159 (50%), Gaps = 24/159 (15%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFS-----DKP 55
+S V+ D T +S+G+ FV+ E+ IE ++G ++LG R +R N++ D+
Sbjct: 157 VSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG-QWLGRRTIRTNWATRKPGDQE 215
Query: 56 KPKL-------PLYAET---DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG 105
KP +Y +T + ++VGN++ ++T + + QAF YG + R+
Sbjct: 216 KPSNYNEKSYDEVYNQTSGDNTSVYVGNIA-NLTEDEIRQAFASYGRISEVRIF------ 268
Query: 106 RSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+ +GY FV + K A+ +N ++ G+ +R S +
Sbjct: 269 KMQGYAFVKFENKNAAAKAITEMNNQDVGGQMVRCSWGK 307
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNL SV+ + + F + G+V +V++DG + Y FV +S + AL+++
Sbjct: 44 LYVGNLDPSVSEDFIATLFNQIGSVTKTKVIHDGAND---PYAFVEFSDHGQASQALQTM 100
Query: 129 NGVELEGRAMRVSLA 143
N L R M+V+ A
Sbjct: 101 NKRLLHDREMKVNWA 115
>gi|4507499|ref|NP_003243.1| nucleolysin TIAR isoform 1 [Homo sapiens]
gi|194205608|ref|XP_001492932.2| PREDICTED: nucleolysin TIAR isoform 2 [Equus caballus]
gi|311271909|ref|XP_001928970.2| PREDICTED: nucleolysin TIAR isoform 1 [Sus scrofa]
gi|332835148|ref|XP_001154534.2| PREDICTED: nucleolysin TIAR isoform 2 [Pan troglodytes]
gi|345792875|ref|XP_865423.2| PREDICTED: nucleolysin TIAR isoform 18 [Canis lupus familiaris]
gi|390473245|ref|XP_002756491.2| PREDICTED: nucleolysin TIAR isoform 1 [Callithrix jacchus]
gi|395827975|ref|XP_003787163.1| PREDICTED: nucleolysin TIAR isoform 2 [Otolemur garnettii]
gi|397510637|ref|XP_003825699.1| PREDICTED: nucleolysin TIAR isoform 1 [Pan paniscus]
gi|402881650|ref|XP_003904379.1| PREDICTED: nucleolysin TIAR isoform 1 [Papio anubis]
gi|403259379|ref|XP_003922194.1| PREDICTED: nucleolysin TIAR [Saimiri boliviensis boliviensis]
gi|426253184|ref|XP_004020280.1| PREDICTED: nucleolysin TIAR isoform 1 [Ovis aries]
gi|426366372|ref|XP_004050232.1| PREDICTED: nucleolysin TIAR isoform 1 [Gorilla gorilla gorilla]
gi|267131|sp|Q01085.1|TIAR_HUMAN RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|189310|gb|AAA36384.1| nucleolysin TIAR [Homo sapiens]
gi|158254826|dbj|BAF83384.1| unnamed protein product [Homo sapiens]
gi|261858270|dbj|BAI45657.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[synthetic construct]
gi|380783711|gb|AFE63731.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|383408329|gb|AFH27378.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|384942770|gb|AFI34990.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|410218474|gb|JAA06456.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257382|gb|JAA16658.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296996|gb|JAA27098.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 375
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 50 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 108
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 109 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 168
Query: 139 RVSLA 143
R + A
Sbjct: 169 RTNWA 173
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 123 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 182
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 183 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 239
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 240 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 271
>gi|195618802|gb|ACG31231.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195625478|gb|ACG34569.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 4 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 63
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
+A+E +NG EL+GR + V+ AQ
Sbjct: 64 SAIEGMNGKELDGRNITVNEAQ 85
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRET RSRGF FVT ST + + IE ++G+E GR + VN
Sbjct: 39 IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVN 82
>gi|1778374|gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding protein [Pisum sativum]
Length = 146
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 55/81 (67%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLF+G LS+ V +SL AF YG VV ARV+ D ++GRSRG+GFV +++ +AL +
Sbjct: 37 KLFIGGLSYGVDDQSLKDAFASYGEVVEARVITDRDTGRSRGFGFVNFTSDESATSALSA 96
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
++G +L GR +RVS A R S
Sbjct: 97 MDGQDLNGRNIRVSYANDRPS 117
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
V+ DR+TGRSRGF FV ++ E + + +DG++ GR +RV++++ +P P
Sbjct: 67 VITDRDTGRSRGFGFVNFTSDESATSALSAMDGQDLNGRNIRVSYAND-RPSAP 119
>gi|54303906|gb|AAV33303.1| aging-associated gene 7 protein [Homo sapiens]
Length = 374
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 50 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 108
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 109 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 168
Query: 139 RVSLA 143
R + A
Sbjct: 169 RTNWA 173
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 123 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 182
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 183 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 239
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 240 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 271
>gi|327267754|ref|XP_003218664.1| PREDICTED: nucleolysin TIAR-like [Anolis carolinensis]
Length = 342
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 69
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 70 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 129
Query: 139 RVSLA 143
R + A
Sbjct: 130 RTNWA 134
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 84 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKT 143
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E+ K ++ G ++ +T + + Q F +G ++ R
Sbjct: 144 TQESTTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQILETRAF----- 198
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 199 -PGKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 232
>gi|396471623|ref|XP_003838913.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
gi|312215482|emb|CBX95434.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
Length = 164
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 53/79 (67%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLF+G L+W ++L Q F+E+G V A V+ D ++GRSRG+GFV Y+ AE + A+++
Sbjct: 3 KLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYANDAEADAAMQA 62
Query: 128 LNGVELEGRAMRVSLAQGR 146
LN E +GR +RV A R
Sbjct: 63 LNNEEFDGRRIRVDKASDR 81
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 1 MLSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
+ + V+ DR+TGRSRGF FV + + +A ++ L+ E+ GR +RV+
Sbjct: 27 QVEEAVVVKDRDTGRSRGFGFVRYANDAEADAAMQALNNEEFDGRRIRVD 76
>gi|297804934|ref|XP_002870351.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
gi|297316187|gb|EFH46610.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
Length = 154
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
Query: 43 LGRILRVNFSDKPKPKLPLYAE------TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 96
LG +LR N + P +P+ + KLFVG LSW +SL AF +G VV A
Sbjct: 7 LGGLLRQNIT--PIGNVPVTSMLGSLRLMSTKLFVGGLSWGTDDQSLRDAFAHFGEVVDA 64
Query: 97 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 148
+V+ D E+GRSRG+GFV ++ + A+ ++G +L GR +RV++A R S
Sbjct: 65 KVIVDRETGRSRGFGFVNFNDEGAASAAISEMDGKDLNGRNIRVNVANERPS 116
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
V+ DRETGRSRGF FV + +A I +DG++ GR +RVN +++ +P P
Sbjct: 66 VIVDRETGRSRGFGFVNFNDEGAASAAISEMDGKDLNGRNIRVNVANE-RPSAP 118
>gi|351710501|gb|EHB13420.1| Nucleolysin TIAR [Heterocephalus glaber]
Length = 392
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 67 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 125
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 126 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 185
Query: 139 RVSLA 143
R + A
Sbjct: 186 RTNWA 190
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 140 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 199
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 200 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 256
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 257 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 288
>gi|27924240|gb|AAH45086.1| Tia1 protein, partial [Xenopus laevis]
Length = 427
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 104 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQK-KDTSNHFHVFVGDLSPEI 162
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 163 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 222
Query: 139 RVSLA 143
R + A
Sbjct: 223 RTNWA 227
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 177 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 236
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G + ++ + + Q F +G ++ RV +
Sbjct: 237 TQENNTKQLRFEDVVNQSSSKNCTVYCGGIGAGLSEQLMRQTFGVFGQILEIRVFPE--- 293
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY F+ +ST A+ S+NG +EG ++
Sbjct: 294 ---KGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVK 325
>gi|405119959|gb|AFR94730.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cryptococcus neoformans var. grubii H99]
Length = 434
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 76/128 (59%), Gaps = 7/128 (5%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS---DKPKPKLPLYAETDFKLFVGNLS 75
+ FV + + + + L+GR+ +RVN++ ++ K + + +FVG+LS
Sbjct: 66 YGFVEYADMRSADQALTTLNGRKIFDAEIRVNWAYQGNQNKED----TQHHYHVFVGDLS 121
Query: 76 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 135
V + L++AF +G++ ARV++D SG+SRGYGF+ + KA+ E A+ S+NG L
Sbjct: 122 PEVNDDVLSKAFGAFGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGS 181
Query: 136 RAMRVSLA 143
RA+RV+ A
Sbjct: 182 RAIRVNWA 189
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSR-GYGFVCYSTKAEMETALE 126
L+VGNLS VT LT+ F G VV A+++ D YGFV Y+ + AL
Sbjct: 23 HLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFNYGFVEYADMRSADQALT 82
Query: 127 SLNGVELEGRAMRVSLA-QGRRS 148
+LNG ++ +RV+ A QG ++
Sbjct: 83 TLNGRKIFDAEIRVNWAYQGNQN 105
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSDK 54
LS+ V++D +G+SRG+ F++ D I +++G E+LG R +RVN++++
Sbjct: 139 LSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNG-EWLGSRAIRVNWANQ 191
>gi|2281006|dbj|BAA21559.1| T-cluster binding protein [Homo sapiens]
gi|119569770|gb|EAW49385.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Homo sapiens]
Length = 265
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 69
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 70 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 129
Query: 139 RVSLA 143
R + A
Sbjct: 130 RTNWA 134
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 84 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 143
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 144 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 200
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 201 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 232
>gi|399886791|gb|AFP52931.1| RBP1 [Hordeum vulgare]
Length = 162
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 59/85 (69%), Gaps = 3/85 (3%)
Query: 63 AETD---FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
AE+D ++ FVG+LSW+ L AF +G ++ A+++ D E+GRSRG+GFV +S +
Sbjct: 2 AESDGAEYRCFVGSLSWNTDDRGLEAAFSSFGEILDAKIINDRETGRSRGFGFVSFSNEQ 61
Query: 120 EMETALESLNGVELEGRAMRVSLAQ 144
M+ A+E +NG EL+GR++ V+ AQ
Sbjct: 62 AMQDAIEGMNGKELDGRSIVVNEAQ 86
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FV+ S + IE ++G+E GR + VN
Sbjct: 40 IINDRETGRSRGFGFVSFSNEQAMQDAIEGMNGKELDGRSIVVN 83
>gi|395742091|ref|XP_003777693.1| PREDICTED: nucleolysin TIAR [Pongo abelii]
Length = 386
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 73/135 (54%), Gaps = 10/135 (7%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP---KPKLPLYAET-------DFK 68
+ FV D A + ++GR+ LG+ ++VN++ P K LP+ F
Sbjct: 50 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKILPVSTPVPNALISDHFH 109
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+FVG+LS +TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ +
Sbjct: 110 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 169
Query: 129 NGVELEGRAMRVSLA 143
G L GR +R + A
Sbjct: 170 GGQWLGGRQIRTNWA 184
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 134 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 193
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 194 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 250
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 251 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 282
>gi|14714709|gb|AAH10496.1| Tial1 protein [Mus musculus]
gi|148685700|gb|EDL17647.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Mus musculus]
gi|149067624|gb|EDM17176.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_d [Rattus norvegicus]
Length = 375
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 50 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 108
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 109 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 168
Query: 139 RVSLA 143
R + A
Sbjct: 169 RTNWA 173
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 123 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 182
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
ET+ K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 183 TQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 239
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 240 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 271
>gi|431922543|gb|ELK19486.1| Polyadenylate-binding protein 4 [Pteropus alecto]
Length = 720
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ V + K K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKVIFVGRAQK---KVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 14/139 (10%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDG------REYLGRILRVNFSDKPKPKLPLYAET-DF- 67
S+G+AFV T E + IE ++G + ++GR F + + + L A+ +F
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR-----FKSRKEREAELGAKAKEFT 191
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+++ N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 128 LNGVELEGRAMRVSLAQGR 146
+NG E+ G+ + V AQ +
Sbjct: 251 MNGKEINGKVIFVGRAQKK 269
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|406602185|emb|CCH46236.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 652
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 14/144 (9%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL-------------P 60
G+SRGFAFV E IE+L+ ++Y G+ L V + K +L
Sbjct: 278 GKSRGFAFVNYEEHEAAVKSIESLNDQDYKGKKLYVGRAQKKSERLEELKKQYEAARIEK 337
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
L LFV NL S+ E L + FQ +G + +V+ D ESG+S+G+GFV +S+ E
Sbjct: 338 LTKSQGVNLFVKNLDDSIDDEKLKEEFQSFGTISSVKVMID-ESGKSKGFGFVSFSSPEE 396
Query: 121 METALESLNGVELEGRAMRVSLAQ 144
A+ +N L G+ + V+LAQ
Sbjct: 397 ASRAISEMNQHMLAGKPLYVALAQ 420
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S + V D T RS G+A+V V+D I+ L+ G+ +R+ +S + K
Sbjct: 86 VSSIRVCRDALTKRSLGYAYVNYHNVKDGEKAIDELNYSVVKGQPIRIMWSQRDPAK--- 142
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
+ +F+ NL ++ ++L F +G ++ +V D G+S+G+GFV + +
Sbjct: 143 RRNGEGNVFIKNLHPAIDNKALHDTFSAFGRILSCKVATD-NFGQSKGFGFVHFESPEAA 201
Query: 122 ETALESLNGVELEGRAMRVSLAQGRR 147
+ A+E++NG+ L + V RR
Sbjct: 202 QAAIENVNGMLLNNNEVYVGPHVARR 227
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
+ET L+VG L S+ L + F G V RV D + RS GY +V Y + E
Sbjct: 56 SETTASLYVGELEPSINEALLFEIFSPIGQVSSIRVCRDALTKRSLGYAYVNYHNVKDGE 115
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
A++ LN ++G+ +R+ +Q
Sbjct: 116 KAIDELNYSVVKGQPIRIMWSQ 137
>gi|387017380|gb|AFJ50808.1| Nucleolysin TIAR [Crotalus adamanteus]
Length = 388
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 66 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 124
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 125 TTEDIKSAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 184
Query: 139 RVSLA 143
R + A
Sbjct: 185 RTNWA 189
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 139 ISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 198
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G +V R
Sbjct: 199 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIVETRAF----- 253
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 254 -PVKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 287
>gi|397482906|ref|XP_003812655.1| PREDICTED: polyadenylate-binding protein 3-like [Pan paniscus]
Length = 634
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 19/148 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI---------LRVNFSDKPK 56
E+G+S+GF FV+ ED ++ ++G+E Y+GR L+ F +
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQ 285
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL + E L +AF +G + A+V+ +G GRS+G+GFVC+S
Sbjct: 286 DRITRYQVVN--LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVATKPLYVALAQ 369
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV-NFSDKPKPKLPLYAET-DF-KLFVG 72
S+G+ FV T E IE ++G GR + V F + + + L A +F +++
Sbjct: 137 SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N + E L F ++G + +V+ D ESG+S+G+GFV + + + A++ +NG E
Sbjct: 197 NFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
L G+ + V AQ +
Sbjct: 256 LNGKQIYVGRAQKK 269
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T S +A+V +D ++ ++ G+ LR+ +S + P L
Sbjct: 40 IRVCRDLITRGSSNYAYVNFQHPKDAEHALDTMNFDVIKGKPLRIMWSQR-DPSLRKSGM 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +FV NL S+ ++L +GN++ V+ D E+G S+GYGFV + T E A
Sbjct: 99 GN--IFVKNLDKSINNKALYDTVSAFGNILSCNVVCD-ENG-SKGYGFVHFETHEAAERA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L GR + V + R+
Sbjct: 155 IEKMNGMLLNGRKVFVGQFKSRK 177
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P P Y L+VG+L VT L + F G ++ RV D + S Y +V +
Sbjct: 3 PSTPSYPTA--SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E AL+++N ++G+ +R+ +Q
Sbjct: 61 HPKDAEHALDTMNFDVIKGKPLRIMWSQ 88
>gi|255726450|ref|XP_002548151.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134075|gb|EER33630.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 472
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 76/131 (58%), Gaps = 2/131 (1%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLY--AETDFKLFVGNLSW 76
+AF+ + + + + L+GR ++VN++ + E F +FVG+LS
Sbjct: 125 YAFIEYDSNDTADMALNTLNGRVIDESEIKVNWAYQSAAIASTLNSEEPLFNIFVGDLSP 184
Query: 77 SVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGR 136
V E L AF ++G++ A V++D ++ RSRGYGFV +S +A+ E AL+++NG L GR
Sbjct: 185 EVNDEGLRNAFSKFGSLKQAHVMWDMQTSRSRGYGFVTFSEQADAELALQTMNGEWLGGR 244
Query: 137 AMRVSLAQGRR 147
A+R + A ++
Sbjct: 245 AIRCNWASHKQ 255
Score = 42.0 bits (97), Expect = 0.095, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
L + V++D +T RSRG+ FVT S D ++ ++G GR +R N++
Sbjct: 201 LKQAHVMWDMQTSRSRGYGFVTFSEQADAELALQTMNGEWLGGRAIRCNWA 251
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 37/75 (49%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNL S + E + F GN + L + ++ Y F+ Y + + AL +L
Sbjct: 84 LYVGNLPKSASEEMVKDLFSVGGNPIKTIKLLNDKNKAGFNYAFIEYDSNDTADMALNTL 143
Query: 129 NGVELEGRAMRVSLA 143
NG ++ ++V+ A
Sbjct: 144 NGRVIDESEIKVNWA 158
>gi|219130188|ref|XP_002185253.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403432|gb|EEC43385.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 605
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 25/158 (15%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREY--------------LGRI---------LR 48
+T ++ GF F+ + E A +E L+G+EY +GR LR
Sbjct: 251 DTNQTLGFGFINFAEHESAVAAVEALNGKEYTTTLDGEEITQQIYVGRAQKKSERERELR 310
Query: 49 VNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSR 108
F + ++ + + L+V NL SVT + L F G + ARV+ D + GRSR
Sbjct: 311 AKFEAEKMDRISKFQGVN--LYVKNLDDSVTDDMLRDEFAVMGTITSARVMKDAKDGRSR 368
Query: 109 GYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
G+GFVCYST E A+ +NG + + + V+LAQ R
Sbjct: 369 GFGFVCYSTPEESTRAVNEMNGKLIANKPIFVALAQRR 406
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ + V D T RS G+++V + D ++ ++ G+ R+ +S + P L
Sbjct: 65 VASIRVCRDAVTRRSLGYSYVNFHQMADAERAMDTMNFSMIKGKPCRIMWSQR-DPSLRR 123
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
+ +FV NL+ ++ + L F +GN++ +V+ D E G S GYG+V Y T
Sbjct: 124 SGVGN--IFVKNLNEAIDNKQLYDTFSLFGNILSCKVVTDREGGVSMGYGYVHYETAEAA 181
Query: 122 ETALESLNGVELEGRAMRV 140
A+E L+G+ ++G+ ++V
Sbjct: 182 NAAIEKLDGMLIDGQEVQV 200
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L+ V L + F G V RV D + RS GY +V + A+ E A++++
Sbjct: 41 LYVGDLAPDVNESLLFEIFSAVGPVASIRVCRDAVTRRSLGYSYVNFHQMADAERAMDTM 100
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ R+ +Q
Sbjct: 101 NFSMIKGKPCRIMWSQ 116
>gi|240279923|gb|EER43428.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H143]
Length = 548
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYL-GRILRVNFSDKPKPKLP 60
+ + TV+ D TGRSRGF F+T + N V+ YL G+I+ PK +P
Sbjct: 180 VQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK---EHYLDGKII------DPKRAIP 230
Query: 61 L-YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
E K+FVG +S T + Q F ++G VV A ++ D +SGR RG+GFV + ++A
Sbjct: 231 RDEQERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEA 290
Query: 120 EMETALESLNGVELEGRAMRVSLAQGR 146
+E L +E+ G+ + V AQ R
Sbjct: 291 AVEATLSG--PLEILGKPIEVKKAQPR 315
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
K+F+G L+W T +SL F ++G V V+ DG +GRSRG+GF+ + + T +
Sbjct: 155 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVM 212
>gi|224082053|ref|XP_002306558.1| predicted protein [Populus trichocarpa]
gi|222856007|gb|EEE93554.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 15 RSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD----FKLF 70
R+RG AFVTM + E+ A + NL+ E+ GR L++N++ K K F LF
Sbjct: 142 RNRGLAFVTMGSPEEAVAALNNLESYEFEGRTLKMNYAKAKKKKPSPPPPPKPGPTFNLF 201
Query: 71 VGNLSWSVTTESLTQAF-QEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 129
V NL + ++ L + F E NVV A +++ R GYGFV + TK E + A+ + +
Sbjct: 202 VANLPFEAKSKDLKEFFIAEGANVVSAEIIFHDNPRRPSGYGFVAFKTKKEADYAISTFS 261
Query: 130 GVELEGRAMRVS 141
E GR +RV+
Sbjct: 262 DKEFMGRQLRVA 273
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARV-LYDGESGRSRGYGFVCYSTKAEMETALE 126
+LF N+ W+ T E + FQ++G VV + +Y R+RG FV + E AL
Sbjct: 105 RLFASNVPWNCTAEDIRALFQKFGTVVDVELSMYS--KIRNRGLAFVTMGSPEEAVAALN 162
Query: 127 SLNGVELEGRAMRVSLA 143
+L E EGR ++++ A
Sbjct: 163 NLESYEFEGRTLKMNYA 179
>gi|20257687|gb|AAM16009.1| glycine-rich RNA binding protein [Zea mays]
gi|20257713|gb|AAM16022.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 7 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 66
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
+A+E +NG EL+GR + V+ AQ
Sbjct: 67 SAIEGMNGKELDGRNITVNEAQ 88
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRET RSRGF FVT ST + + IE ++G+E GR + VN
Sbjct: 42 IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVN 85
>gi|20257715|gb|AAM16023.1| glycine-rich RNA binding protein [Zea mays]
gi|20257721|gb|AAM16026.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 7 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 66
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
+A+E +NG EL+GR + V+ AQ
Sbjct: 67 SAIEGMNGKELDGRNITVNEAQ 88
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRET RSRGF FVT ST + + IE ++G+E GR + VN
Sbjct: 42 IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVN 85
>gi|82802757|gb|ABB92429.1| PABP3 [Hylobates lar]
Length = 635
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 19/148 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI---------LRVNFSDKPK 56
++G+S+GF FV+ ED ++ ++G+E Y+GR L+ F +
Sbjct: 226 QSGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQ 285
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL ++ E L +AF +G + A+V+ +G GRS+G+GFVC+S
Sbjct: 286 DRITRYQVVN--LYVKNLDDAIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVATEPLYVALAQ 369
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 71/139 (51%), Gaps = 14/139 (10%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDG------REYLGRILRVNFSDKPKPKLPLYAET-DF- 67
S+G+ FV T E IE ++G + ++GR F + + + L A +F
Sbjct: 137 SKGYGFVHFGTREAAERAIEKMNGIPLNDCKVFVGR-----FKSRKEREAELGARAKEFP 191
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+++ N + E L F ++G + +V+ D +SG+S+G+GFV + + + A++
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTD-QSGKSKGFGFVSFEKHEDAQKAVDE 250
Query: 128 LNGVELEGRAMRVSLAQGR 146
+NG EL G+ + V AQ +
Sbjct: 251 MNGKELNGKQIYVGRAQKK 269
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 5/129 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS +A+V +D ++ ++ G+ LR+ +S + P L
Sbjct: 40 IRVCRDVITRRSSNYAYVNFQHPKDAEHALDTMNFDVIKGKPLRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +FV NL S+ ++L +GNV+ +V+ D E+G S+GYGFV + T+ E A
Sbjct: 99 GN--IFVKNLDKSINNKALYDTVSAFGNVLSCKVVCD-ENG-SKGYGFVHFGTREAAERA 154
Query: 125 LESLNGVEL 133
+E +NG+ L
Sbjct: 155 IEKMNGIPL 163
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P P Y L+VG+L VT L + F G ++ RV D + RS Y +V +
Sbjct: 3 PSTPSYPTA--SLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSNYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E AL+++N ++G+ +R+ +Q
Sbjct: 61 HPKDAEHALDTMNFDVIKGKPLRIMWSQ 88
>gi|47219550|emb|CAG09904.1| unnamed protein product [Tetraodon nigroviridis]
Length = 623
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
TG+SRGF F++ ED N +E+++G E G+ + F + + K+ AE K
Sbjct: 227 TGKSRGFGFISYEKHEDANKAVEDMNGTELNGKTV---FVGRAQKKMERQAELKRKFEML 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EEGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T + + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N + E L + F +YG + +V+ D +G+SRG+GF+ Y + A+E +NG E
Sbjct: 197 NFGDDMNDERLKELFDKYGKTLSVKVMTD-PTGKSRGFGFISYEKHEDANKAVEDMNGTE 255
Query: 133 LEGRAMRVSLAQGR 146
L G+ + V AQ +
Sbjct: 256 LNGKTVFVGRAQKK 269
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V S D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFSQPADAERALDTMNFDVVKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQDAADRA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L +T L + F G V+ RV D + RS GY +V +S A+ E AL+++
Sbjct: 13 LYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVVKGKPIRIMWSQ 88
>gi|20257695|gb|AAM16013.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 8 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 67
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
+A+E +NG EL+GR + V+ AQ
Sbjct: 68 SAIEGMNGKELDGRNITVNEAQ 89
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRET RSRGF FVT ST + + IE ++G+E GR + VN
Sbjct: 43 IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVN 86
>gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens]
Length = 631
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 21/147 (14%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK----- 68
G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQLK 284
Query: 69 -----------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S+
Sbjct: 285 QERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSS 342
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQ 144
E A+ +NG + + + V+LAQ
Sbjct: 343 PEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D +G+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ + L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKVLYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|403292060|ref|XP_003937075.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 643
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 21/147 (14%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK----- 68
G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQLK 284
Query: 69 -----------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S+
Sbjct: 285 QERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSS 342
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQ 144
E A+ +NG + + + V+LAQ
Sbjct: 343 PEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D +G+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|390465724|ref|XP_002750686.2| PREDICTED: polyadenylate-binding protein 4 [Callithrix jacchus]
Length = 656
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 21/147 (14%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK----- 68
G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQLK 284
Query: 69 -----------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S+
Sbjct: 285 QERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSS 342
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQ 144
E A+ +NG + + + V+LAQ
Sbjct: 343 PEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D +G+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFIQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|208431836|ref|NP_001129126.1| polyadenylate-binding protein 4 isoform 3 [Homo sapiens]
gi|332808512|ref|XP_003308043.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730718|ref|XP_003775778.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pongo abelii]
gi|426329064|ref|XP_004025564.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Gorilla
gorilla gorilla]
gi|119627671|gb|EAX07266.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_f [Homo sapiens]
gi|410227602|gb|JAA11020.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 21/147 (14%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK----- 68
G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQLK 284
Query: 69 -----------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S+
Sbjct: 285 QERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSS 342
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQ 144
E A+ +NG + + + V+LAQ
Sbjct: 343 PEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D +G+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|119627667|gb|EAX07262.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_b [Homo sapiens]
Length = 645
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 21/147 (14%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK----- 68
G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQLK 284
Query: 69 -----------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S+
Sbjct: 285 QERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSS 342
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQ 144
E A+ +NG + + + V+LAQ
Sbjct: 343 PEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D +G+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|4504715|ref|NP_003810.1| polyadenylate-binding protein 4 isoform 2 [Homo sapiens]
gi|332808510|ref|XP_003308042.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730716|ref|XP_003775777.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pongo abelii]
gi|397488844|ref|XP_003815453.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pan paniscus]
gi|426329066|ref|XP_004025565.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Gorilla
gorilla gorilla]
gi|12229875|sp|Q13310.1|PABP4_HUMAN RecName: Full=Polyadenylate-binding protein 4; Short=PABP-4;
Short=Poly(A)-binding protein 4; AltName:
Full=Activated-platelet protein 1; Short=APP-1; AltName:
Full=Inducible poly(A)-binding protein; Short=iPABP
gi|1163177|gb|AAC50350.1| inducible poly(A)-binding protein [Homo sapiens]
gi|2801403|gb|AAB97309.1| polyadenylate binding protein [Homo sapiens]
gi|119627669|gb|EAX07264.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_d [Homo sapiens]
gi|410227600|gb|JAA11019.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|1585757|prf||2201474A inducible poly(A)-binding protein
Length = 644
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 21/147 (14%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK----- 68
G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQLK 284
Query: 69 -----------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S+
Sbjct: 285 QERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSS 342
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQ 144
E A+ +NG + + + V+LAQ
Sbjct: 343 PEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D +G+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|392578419|gb|EIW71547.1| hypothetical protein TREMEDRAFT_56482 [Tremella mesenterica DSM
1558]
Length = 223
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 57/79 (72%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K++VGNLSW+ T ++L AF ++G V+ + V+ D E+GRSRG+GFV +ST E E +++
Sbjct: 5 KVYVGNLSWNTTDDTLRDAFMQFGQVLDSIVMKDRETGRSRGFGFVTFSTAEEAEISIQQ 64
Query: 128 LNGVELEGRAMRVSLAQGR 146
+N L+GR +RV++A +
Sbjct: 65 MNEQPLDGRNIRVNMANAK 83
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KP 55
V+ DRETGRSRGF FVT ST E+ I+ ++ + GR +RVN ++ KP
Sbjct: 35 VMKDRETGRSRGFGFVTFSTAEEAEISIQQMNEQPLDGRNIRVNMANAKP 84
>gi|357144334|ref|XP_003573255.1| PREDICTED: uncharacterized protein LOC100824407 [Brachypodium
distachyon]
Length = 226
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
++ FVG+LSWS T L AF ++G V +V+ D SGRSRG+GFV + K ME A+E
Sbjct: 7 YRCFVGSLSWSTTDVDLKDAFGKFGRVTETKVVLDKYSGRSRGFGFVTFDDKKAMEEAVE 66
Query: 127 SLNGVELEGRAMRVSLAQ 144
++NG++L+GR + V AQ
Sbjct: 67 AMNGIDLDGRNITVERAQ 84
>gi|348522243|ref|XP_003448635.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Oreochromis niloticus]
Length = 387
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+T + + FV A + ++GR+ +G+ ++VN++ P + F +FV
Sbjct: 42 DTAGNDPYCFVEFYDHRHAAASLAAMNGRKIMGKEVKVNWATTPTSQK-KDTSNHFHVFV 100
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS +TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A++ + G
Sbjct: 101 GDLSPEITTEDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQ 160
Query: 132 ELEGRAMRVSLA 143
L GR +R + A
Sbjct: 161 WLGGRQIRTNWA 172
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I+++ G+ GR +R N++ + P
Sbjct: 122 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKT 181
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G +S +T + + Q F +G ++ RV D
Sbjct: 182 THENNSKHLSFDEVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEVRVFPD--- 238
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +++ A+ S+NG +EG ++
Sbjct: 239 ---KGYSFVRFNSHESAAHAIVSVNGSSIEGHIVK 270
>gi|119627670|gb|EAX07265.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_e [Homo sapiens]
Length = 615
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 21/147 (14%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK----- 68
G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQLK 284
Query: 69 -----------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S+
Sbjct: 285 QERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSS 342
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQ 144
E A+ +NG + + + V+LAQ
Sbjct: 343 PEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D +G+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|344304396|gb|EGW34628.1| hypothetical protein SPAPADRAFT_57674 [Spathaspora passalidarum
NRRL Y-27907]
Length = 414
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS------DKPKPKLP 60
V+ +R TG+SRG+ +V + + + G+E GR + ++ S K +
Sbjct: 206 VIMERSTGKSRGYGYVDFDNKDSAEKALVEMQGKEIDGRPINLDMSTGKPHASKSNDRAK 265
Query: 61 LYAETDFK----LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
+ +T LF+GNLS++ ++L + F ++G V+ R+ ++ + +G+G+V +S
Sbjct: 266 QFGDTPSAPSDTLFIGNLSFNAQRDNLFEIFGQHGTVISCRIPTHPDTQQPKGFGYVQFS 325
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGR 146
+ E + ALE+LNG +EGRA R+ + R
Sbjct: 326 SVDEAKAALEALNGEYIEGRACRLDFSAPR 355
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
LFVG LSW++ E L + F+ G V+GARV+ + +G+SRGYG+V + K E AL +
Sbjct: 177 LFVGRLSWNIDDEWLKREFEHIGGVIGARVIMERSTGKSRGYGYVDFDNKDSAEKALVEM 236
Query: 129 NGVELEGRAMRVSLAQGR 146
G E++GR + + ++ G+
Sbjct: 237 QGKEIDGRPINLDMSTGK 254
>gi|335291035|ref|XP_003127861.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Sus scrofa]
Length = 644
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|320581683|gb|EFW95902.1| Poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 629
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 14/146 (9%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP----------- 60
E+G+SRGF FV ED +E L+ ++ G+ L V + K ++
Sbjct: 263 ESGKSRGFGFVNFEKHEDAVKAVEELNNKDIDGQKLYVGRAQKKSERMESLKHQYEAARQ 322
Query: 61 --LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 118
L + LFV NL S+ L + F+ YG + A+V+ D ++G+S+G+GFVCYS+
Sbjct: 323 EQLNKYQGYNLFVKNLDDSIDDAKLEEEFKPYGTITSAKVMLD-DAGKSKGFGFVCYSSP 381
Query: 119 AEMETALESLNGVELEGRAMRVSLAQ 144
E A+ ++ + G+ + V+LAQ
Sbjct: 382 EEATKAITEMHQRMVAGKPLYVALAQ 407
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S + V D + +S G+A+V + D +E L+ G+ R+ +S + P L
Sbjct: 73 VSTIRVCRDAVSKQSLGYAYVNFQSHADGEKALEELNYTPIKGKACRIMWSQR-DPSLRR 131
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
+ +F+ NL ++ ++L F +G ++ ++ D E+G S+G+GFV Y
Sbjct: 132 NGSGN--IFIKNLHPAIDNKTLHDTFSAFGKILSCKIATD-ENGNSKGFGFVHYEESESA 188
Query: 122 ETALESLNGVELEGRAMRV 140
+ A+E++NG+ L + V
Sbjct: 189 KAAIENVNGMLLNDHEVYV 207
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 45/82 (54%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
+ET L+VG L SVT L + F G V RV D S +S GY +V + + A+ E
Sbjct: 43 SETLASLYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYAYVNFQSHADGE 102
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
ALE LN ++G+A R+ +Q
Sbjct: 103 KALEELNYTPIKGKACRIMWSQ 124
>gi|301790633|ref|XP_002930398.1| PREDICTED: polyadenylate-binding protein 4-like [Ailuropoda
melanoleuca]
Length = 644
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKVIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
V D T RS G+A+V D ++ ++ G+ +R+ +S + P L +
Sbjct: 42 VCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGVGN 100
Query: 67 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 126
+F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A+E
Sbjct: 101 --VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIE 156
Query: 127 SLNGVELEGRAMRVSLAQGRR 147
+NG+ L R + V + R+
Sbjct: 157 KMNGMLLNDRKVFVGRFKSRK 177
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ V D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|73909065|gb|AAH45608.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
Length = 631
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 83/155 (53%), Gaps = 20/155 (12%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI---------LRV 49
+ V+ D E+G+S+GF FV+ ED ++ ++G+E Y+GR L+
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKR 278
Query: 50 NFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
F + ++ Y + L+V NL + E L +AF +G + A+V+ +G GRS+G
Sbjct: 279 TFEQMKQDRITRYQVVN--LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG--GRSKG 334
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+GFVC+S+ E A+ +NG + + + V+LAQ
Sbjct: 335 FGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV-NFSDKPKPKLPLYAET-DFK-LFVG 72
S+G+ FV T E I+ ++G GR + V F + + + L A +F +++
Sbjct: 137 SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N + E L F ++G + +V+ D ESG+S+G+GFV + + + A++ +NG E
Sbjct: 197 NFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
L G+ + V AQ +
Sbjct: 256 LNGKQIYVGRAQKK 269
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ + D T S +A+V +D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKPVRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +FV NL S+ ++L +GN++ V+ D E+G S+GYGFV + T E A
Sbjct: 99 GN--IFVKNLDKSINNKALYDTVSAFGNILSCNVVCD-ENG-SKGYGFVHFETHEAAERA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
++ +NG+ L GR + V + R+
Sbjct: 155 IKKMNGMLLNGRKVFVGQFKSRK 177
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P P Y L+VG+L VT L + F G ++ R+ D + S Y +V +
Sbjct: 3 PSTPSYPTAS--LYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E AL+++N ++G+ +R+ +Q
Sbjct: 61 HTKDAEHALDTMNFDVIKGKPVRIMWSQ 88
>gi|6678349|ref|NP_033409.1| nucleolysin TIAR [Mus musculus]
gi|61557246|ref|NP_001013211.1| nucleolysin TIAR [Rattus norvegicus]
gi|2500589|sp|P70318.1|TIAR_MOUSE RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|1592563|gb|AAC52870.1| RNA binding protein TIAR [Mus musculus]
gi|12848609|dbj|BAB28019.1| unnamed protein product [Mus musculus]
gi|60552455|gb|AAH91409.1| Tia1 cytotoxic granule-associated RNA binding protein-like 1
[Rattus norvegicus]
gi|148685702|gb|EDL17649.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Mus musculus]
gi|149067621|gb|EDM17173.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_a [Rattus norvegicus]
Length = 392
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 67 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 125
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 126 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 185
Query: 139 RVSLA 143
R + A
Sbjct: 186 RTNWA 190
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 140 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 199
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
ET+ K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 200 TQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 256
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 257 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 288
>gi|325089595|gb|EGC42905.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces capsulatus H88]
Length = 492
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 68/128 (53%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV + L+GR +RVN++ + F +FVG+LS V
Sbjct: 134 YGFVEYDDPGAAERAMSTLNGRRVHQSEIRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEV 193
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
E L QAF +G+V ARV++D ++GRSRGYGFV + + + E AL S++G L RA+
Sbjct: 194 NDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAI 253
Query: 139 RVSLAQGR 146
R + A +
Sbjct: 254 RCNWANQK 261
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 266
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 267 SQQQAMAAMGMTPSTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIP 326
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ FV T A+ L+G + GR ++ S +
Sbjct: 327 LFQNFGYVVETRFQTD------RGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGRD 380
Query: 146 R 146
R
Sbjct: 381 R 381
Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L++G L VT + L Q F+ G+V +++ D S + YGFV Y E A+ +L
Sbjct: 94 LYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNS-KGLNYGFVEYDDPGAAERAMSTL 152
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 153 NGRRVHQSEIRVNWA 167
>gi|410263252|gb|JAA19592.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 21/147 (14%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK----- 68
G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQLK 284
Query: 69 -----------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S+
Sbjct: 285 QERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSS 342
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQ 144
E A+ +NG + + + V+LAQ
Sbjct: 343 PEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D +G+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|410263250|gb|JAA19591.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 644
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 21/147 (14%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK----- 68
G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQLK 284
Query: 69 -----------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S+
Sbjct: 285 QERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSS 342
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQ 144
E A+ +NG + + + V+LAQ
Sbjct: 343 PEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D +G+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|403292062|ref|XP_003937076.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 630
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 21/147 (14%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK----- 68
G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQLK 284
Query: 69 -----------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S+
Sbjct: 285 QERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSS 342
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQ 144
E A+ +NG + + + V+LAQ
Sbjct: 343 PEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D +G+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|385305500|gb|EIF49466.1| pub1p [Dekkera bruxellensis AWRI1499]
Length = 489
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 82/147 (55%), Gaps = 4/147 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+ + +LYD+ R +AF+ ++ L+G L++ ++ + +
Sbjct: 184 IQSIKILYDKNK-RGFNYAFIEYEDHXKAENALQALNGTVLANYPLKITWAYRTQQS--- 239
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
+ +F LFVG+LS + +SL F ++ + V A V++D ++GRSRGYGFV + +
Sbjct: 240 RSGENFTLFVGDLSPEIDDDSLAATFSKFPSFVQANVMWDMKTGRSRGYGFVSFQNNQDA 299
Query: 122 ETALESLNGVELEGRAMRVSLAQGRRS 148
ET L+++NG+ L GR++R++ A R++
Sbjct: 300 ETVLQTMNGMSLGGRSIRLNWAVRRQN 326
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYG-NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
L+VGN+ SV+ + L F G + ++LYD ++ R Y F+ Y + E AL++
Sbjct: 159 LYVGNIDNSVSEDMLRDLFGSLGAQIQSIKILYD-KNKRGFNYAFIEYEDHXKAENALQA 217
Query: 128 LNGVELEGRAMRVSLA 143
LNG L ++++ A
Sbjct: 218 LNGTVLANYPLKITWA 233
>gi|340522219|gb|EGR52452.1| predicted protein [Trichoderma reesei QM6a]
Length = 477
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 71/135 (52%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+ + + FV ++ L+GR +RVN++ + F +FV
Sbjct: 110 KNAKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTTSKEDTSNHFHIFV 169
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS V + L QAF +G+V ARV++D ++GRSRGYGFV + + + E AL S++G
Sbjct: 170 GDLSNEVNDDILMQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGE 229
Query: 132 ELEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 230 WLGSRAIRCNWANQK 244
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKP-- 57
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P
Sbjct: 191 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSM 249
Query: 58 --------------------KLPLYAETDFKL------------FVGNLSWSVTTESLTQ 85
+ P + +++ +VGNL+ T +
Sbjct: 250 AQQQAMQAMGMTPTTPFGHHQFPAHGVASYEMILAQTPNWQTTCYVGNLTPYTTPNDVVP 309
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G V+ +R D RG+ F+ + A+ +NG + GR ++ S +
Sbjct: 310 LFQNFGFVMESRFQAD------RGFAFIKMDSHENAAMAICQMNGYNVNGRPLKCSWGKD 363
Query: 146 R 146
+
Sbjct: 364 K 364
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+++L
Sbjct: 77 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGYNYGFVEYDDPGAAERAMQTL 135
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 136 NGRRVHQSEIRVNWA 150
>gi|431895395|gb|ELK04911.1| Nucleolysin TIAR [Pteropus alecto]
Length = 428
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 103 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 161
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 162 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 221
Query: 139 RVSLA 143
R + A
Sbjct: 222 RTNWA 226
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 176 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 235
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 236 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 292
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 293 ---KGYSFVRFSTHESAAHAIVSVNGTAIEGHVVK 324
>gi|410966844|ref|XP_003989937.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Felis catus]
Length = 631
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKVIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|89272470|emb|CAJ83096.1| OTTXETP00000006403 [Xenopus (Silurana) tropicalis]
Length = 389
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 66 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 124
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 125 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 184
Query: 139 RVSLA 143
R + A
Sbjct: 185 RTNWA 189
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 139 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 198
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G + +T + + Q F +G ++ RV +
Sbjct: 199 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIGSGLTEQLMRQTFGVFGQILEIRVFPE--- 255
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY F+ +ST A+ S+NG +EG ++
Sbjct: 256 ---KGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVK 287
>gi|410966842|ref|XP_003989936.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Felis catus]
Length = 644
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKVIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|395853070|ref|XP_003799043.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Otolemur
garnettii]
Length = 646
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKVIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|20257689|gb|AAM16010.1| glycine-rich RNA binding protein [Zea mays]
Length = 147
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 6 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 65
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
+A+E +NG EL+GR + V+ AQ
Sbjct: 66 SAIEGMNGKELDGRNITVNEAQ 87
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRET RSRGF FVT ST + + IE ++G+E GR + VN
Sbjct: 41 IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVN 84
>gi|30681492|ref|NP_850017.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|330252116|gb|AEC07210.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 159
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 58/81 (71%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ +++ FVG L+W+ +L AF +YG+V+ ++++ D E+GRSRG+GFV + + M+
Sbjct: 5 DVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKD 64
Query: 124 ALESLNGVELEGRAMRVSLAQ 144
A+E +NG +L+GR++ V+ AQ
Sbjct: 65 AIEGMNGQDLDGRSITVNEAQ 85
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + IE ++G++ GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVN 82
>gi|21553354|gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
Length = 175
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 58/81 (71%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ +++ FVG L+W+ +L AF +YG+V+ ++++ D E+GRSRG+GFV + + M+
Sbjct: 5 DVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKD 64
Query: 124 ALESLNGVELEGRAMRVSLAQ 144
A+E +NG +L+GR++ V+ AQ
Sbjct: 65 AIEGMNGQDLDGRSITVNEAQ 85
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + IE ++G++ GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVN 82
>gi|227204227|dbj|BAH56965.1| AT2G21660 [Arabidopsis thaliana]
Length = 153
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 58/81 (71%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ +++ FVG L+W+ +L AF +YG+V+ ++++ D E+GRSRG+GFV + + M+
Sbjct: 5 DVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKD 64
Query: 124 ALESLNGVELEGRAMRVSLAQ 144
A+E +NG +L+GR++ V+ AQ
Sbjct: 65 AIEGMNGQDLDGRSITVNEAQ 85
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + IE ++G++ GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVN 82
>gi|11610605|gb|AAG38953.1|AF132026_1 testis-specific poly(A)-binding protein [Homo sapiens]
Length = 631
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 83/155 (53%), Gaps = 20/155 (12%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI---------LRV 49
+ V+ D E+G+S+GF FV+ ED ++ ++G+E Y+GR L+
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKR 278
Query: 50 NFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
F + ++ Y + L+V NL + E L +AF +G + A+V+ +G GRS+G
Sbjct: 279 TFEQMKQDRITRYQVVN--LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG--GRSKG 334
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+GFVC+S+ E A+ +NG + + + V+LAQ
Sbjct: 335 FGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV-NFSDKPKPKLPLYAET-DFK-LFVG 72
S+G+ FV T E I+ ++G GR + V F + + + L A +F +++
Sbjct: 137 SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N + E L F ++G + +V+ D ESG+S+G+GFV + + + A++ +NG E
Sbjct: 197 NFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
L G+ + V AQ +
Sbjct: 256 LNGKQIYVGRAQKK 269
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ + D T S +A+V +D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKPVRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +FV NL S+ ++L +GN++ V+ D E+G S+GYGFV + T E A
Sbjct: 99 GN--IFVKNLDKSINNKALYDTVSAFGNILSCNVVCD-ENG-SKGYGFVHFETHEAAERA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
++ +NG+ L GR + V + R+
Sbjct: 155 IKKMNGMLLNGRKVFVGQFKSRK 177
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P P Y L+VG+L VT L + F G ++ R+ D + S Y +V +
Sbjct: 3 PSTPSYPTAS--LYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E AL+++N ++G+ +R+ +Q
Sbjct: 61 HTKDAEHALDTMNFDVIKGKPVRIMWSQ 88
>gi|15226605|ref|NP_179760.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|544424|sp|Q03250.1|GRP7_ARATH RecName: Full=Glycine-rich RNA-binding protein 7
gi|16226372|gb|AAL16149.1|AF428381_1 At2g22292/F2G1.7_ [Arabidopsis thaliana]
gi|16301|emb|CAA78711.1| glycine rich protein [Arabidopsis thaliana]
gi|166837|gb|AAA32853.1| RNA-binding protein [Arabidopsis thaliana]
gi|4567224|gb|AAD23639.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
gi|15810032|gb|AAL06943.1| At2g21660/F2G1.7 [Arabidopsis thaliana]
gi|330252115|gb|AEC07209.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 176
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 58/81 (71%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ +++ FVG L+W+ +L AF +YG+V+ ++++ D E+GRSRG+GFV + + M+
Sbjct: 5 DVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKD 64
Query: 124 ALESLNGVELEGRAMRVSLAQ 144
A+E +NG +L+GR++ V+ AQ
Sbjct: 65 AIEGMNGQDLDGRSITVNEAQ 85
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + IE ++G++ GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVN 82
>gi|208431833|ref|NP_001129125.1| polyadenylate-binding protein 4 isoform 1 [Homo sapiens]
gi|332808508|ref|XP_513344.3| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pan
troglodytes]
gi|395730714|ref|XP_002811047.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pongo abelii]
gi|397488842|ref|XP_003815452.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pan paniscus]
gi|426329062|ref|XP_004025563.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Gorilla
gorilla gorilla]
gi|66267552|gb|AAH94755.1| PABPC4 protein [Homo sapiens]
gi|119627668|gb|EAX07263.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_c [Homo sapiens]
gi|410227598|gb|JAA11018.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410227604|gb|JAA11021.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 21/147 (14%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK----- 68
G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQLK 284
Query: 69 -----------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S+
Sbjct: 285 QERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSS 342
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQ 144
E A+ +NG + + + V+LAQ
Sbjct: 343 PEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D +G+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|67900918|ref|XP_680715.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
gi|40742836|gb|EAA62026.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
Length = 448
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 79/147 (53%), Gaps = 13/147 (8%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYL-GRILRVNFSDKPKPKLP 60
+ + TV+ D TGRSRGF F+T + N V+ YL G+I+ PK +P
Sbjct: 25 VQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK---EHYLDGKII------DPKRAIP 75
Query: 61 L-YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
E K+FVG +S T + Q F ++G V+ A ++ D ++GR RG+GFV + ++A
Sbjct: 76 RDEQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTFDSEA 135
Query: 120 EMETALESLNGVELEGRAMRVSLAQGR 146
+E AL +E+ G+ + V AQ R
Sbjct: 136 AVEAALS--RPLEILGKTIEVKKAQPR 160
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+F+G L+W T +SL + F ++G V V+ D +GRSRG+GF+ + + T +
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVM 57
>gi|41152034|ref|NP_958453.1| polyadenylate-binding protein 4 [Danio rerio]
gi|31419252|gb|AAH53126.1| Poly(A) binding protein, cytoplasmic 4 (inducible form) [Danio
rerio]
Length = 637
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
TG+SRGF FV+ ED N +E ++G E G+ + F + + K+ AE K
Sbjct: 228 TGKSRGFGFVSYEKHEDANKAVEEMNGTELNGKTV---FVGRAQKKMERQAELKRKFEQL 284
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 285 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EEGRSKGFGFVCFS 342
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 343 SPEEATKAVTEMNGRIVGSKPLYVALAQ 370
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T + + IE ++G R + R + + ++ A+ +++
Sbjct: 138 SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEMGAKAKEFTNVYIK 197
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N + + L + F +YG + +V+ D +G+SRG+GFV Y + A+E +NG E
Sbjct: 198 NFGDDMDDQRLKELFDKYGKTLSVKVMTD-PTGKSRGFGFVSYEKHEDANKAVEEMNGTE 256
Query: 133 LEGRAMRVSLAQGR 146
L G+ + V AQ +
Sbjct: 257 LNGKTVFVGRAQKK 270
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 41 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVVKGKPIRIMWSQR-DPSLRKSGV 99
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 100 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQDAADRA 155
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 156 IEKMNGMLLNDRKVFVGRFKSRK 178
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L +T L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 14 LYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 73
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 74 NFDVVKGKPIRIMWSQ 89
>gi|190402270|gb|ACE77680.1| RNA binding motif protein 39 isoform a (predicted) [Sorex araneus]
Length = 435
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 184 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 242
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 243 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 302
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 303 CAKKALEQLNGFELAGRPMKV 323
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 276 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|48734702|gb|AAH71591.1| PABPC4 protein [Homo sapiens]
Length = 660
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 21/147 (14%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK----- 68
G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQLK 284
Query: 69 -----------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S+
Sbjct: 285 QERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSS 342
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQ 144
E A+ +NG + + + V+LAQ
Sbjct: 343 PEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D +G+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|73976763|ref|XP_857000.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Canis lupus
familiaris]
Length = 644
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKVIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|395853072|ref|XP_003799044.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Otolemur
garnettii]
Length = 633
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKVIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|350585908|ref|XP_003482078.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Sus scrofa]
Length = 660
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|344287655|ref|XP_003415568.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Loxodonta
africana]
Length = 631
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKVIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|338721952|ref|XP_003364452.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Equus
caballus]
Length = 631
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKVIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|281344898|gb|EFB20482.1| hypothetical protein PANDA_020836 [Ailuropoda melanoleuca]
Length = 674
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 240 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI---FVGRAQKKVERQAELKRKFEQL 296
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 297 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 354
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 355 SPEEATKAVTEMNGRIVGSKPLYVALAQ 382
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 150 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 209
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 210 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 268
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 269 ISGKVIFVGRAQKK 282
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRIL-RVNFS-DKPKPKLPLYAE 64
V D T RS G+A+V D + R L +NF K KP ++++
Sbjct: 42 VCRDMITRRSLGYAYVNFQQPADVMPTSTSSSPLTVTERALDTMNFDVIKGKPIRIMWSQ 101
Query: 65 TDFKL--------FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
D L F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV +
Sbjct: 102 RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFE 159
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQGRR 147
T+ + A+E +NG+ L R + V + R+
Sbjct: 160 TQEAADKAIEKMNGMLLNDRKVFVGRFKSRK 190
Score = 35.4 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM------- 121
L+VG+L VT L + F G V+ V D + RS GY +V + A++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQPADVMPTSTSS 72
Query: 122 ------ETALESLNGVELEGRAMRVSLAQ 144
E AL+++N ++G+ +R+ +Q
Sbjct: 73 SPLTVTERALDTMNFDVIKGKPIRIMWSQ 101
>gi|149693775|ref|XP_001503500.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Equus
caballus]
Length = 644
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKVIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|119223939|gb|AAI26843.1| TIAL1 protein [Bos taurus]
Length = 279
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 18 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEI 76
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 77 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 136
Query: 139 RVSLA 143
R + A
Sbjct: 137 RTNWA 141
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 91 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 150
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 151 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 207
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 208 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 239
>gi|355715684|gb|AES05403.1| RNA binding motif protein 39 [Mustela putorius furo]
Length = 271
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 64 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 122
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 123 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 182
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 183 CAKKALEQLNGFELAGRPMKV 203
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 156 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 203
>gi|82802749|gb|ABB92425.1| PABP3 [Homo sapiens]
Length = 630
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 19/148 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI---------LRVNFSDKPK 56
E+G+S+GF FV+ ED ++ ++G+E Y+GR L+ F +
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQ 285
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL + E L +AF +G + A+V+ +G GRS+G+GFVC+S
Sbjct: 286 DRITRYQVVN--LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVATKPLYVALAQ 369
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV-NFSDKPKPKLPLYAET-DF-KLFVG 72
S+G+ FV T E I+ ++G GR + V F + + + L A +F +++
Sbjct: 137 SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N + E L F ++G + +V+ D ESG+S+G+GFV + + + A++ +NG E
Sbjct: 197 NFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
L G+ + V AQ +
Sbjct: 256 LNGKQIYVGRAQKK 269
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 5/138 (3%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKL 69
D T S +A+V +D ++ ++ G+ +R+ +S + P L + +
Sbjct: 45 DLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKPVRIMWSQR-DPSLRKSGVGN--I 101
Query: 70 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 129
FV NL S+ ++L +GN++ V+ D E+G S+GYGFV + T E A++ +N
Sbjct: 102 FVKNLDKSINNKALYDTVSAFGNILSCNVVCD-ENG-SKGYGFVHFETHEAAERAIKKMN 159
Query: 130 GVELEGRAMRVSLAQGRR 147
G+ L GR + V + R+
Sbjct: 160 GMLLNGRKVFVGQFKSRK 177
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P P Y L+VG+L VT L + F G ++ R+ D + S Y +V +
Sbjct: 3 PSTPSYPTA--SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E AL+++N ++G+ +R+ +Q
Sbjct: 61 HTKDAEHALDTMNFDVIKGKPVRIMWSQ 88
>gi|45238849|ref|NP_112241.2| polyadenylate-binding protein 3 [Homo sapiens]
gi|28201852|sp|Q9H361.2|PABP3_HUMAN RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3; AltName:
Full=Testis-specific poly(A)-binding protein
gi|20379668|gb|AAH27617.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|119628765|gb|EAX08360.1| poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|123982576|gb|ABM83029.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|123997243|gb|ABM86223.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|189055351|dbj|BAG36140.1| unnamed protein product [Homo sapiens]
Length = 631
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 19/148 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI---------LRVNFSDKPK 56
E+G+S+GF FV+ ED ++ ++G+E Y+GR L+ F +
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQ 285
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL + E L +AF +G + A+V+ +G GRS+G+GFVC+S
Sbjct: 286 DRITRYQVVN--LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVATKPLYVALAQ 369
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV-NFSDKPKPKLPLYAET-DF-KLFVG 72
S+G+ FV T E I+ ++G GR + V F + + + L A +F +++
Sbjct: 137 SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N + E L F ++G + +V+ D ESG+S+G+GFV + + + A++ +NG E
Sbjct: 197 NFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
L G+ + V AQ +
Sbjct: 256 LNGKQIYVGRAQKK 269
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 5/138 (3%)
Query: 10 DRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKL 69
D T S +A+V +D ++ ++ G+ +R+ +S + P L + +
Sbjct: 45 DLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKPVRIMWSQR-DPSLRKSGVGN--I 101
Query: 70 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 129
FV NL S+ ++L +GN++ V+ D E+G S+GYGFV + T E A++ +N
Sbjct: 102 FVKNLDKSINNKALYDTVSAFGNILSCNVVCD-ENG-SKGYGFVHFETHEAAERAIKKMN 159
Query: 130 GVELEGRAMRVSLAQGRR 147
G+ L GR + V + R+
Sbjct: 160 GMLLNGRKVFVGQFKSRK 177
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P P Y L+VG+L VT L + F G ++ R+ D + S Y +V +
Sbjct: 3 PSTPSYPTA--SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E AL+++N ++G+ +R+ +Q
Sbjct: 61 HTKDAEHALDTMNFDVIKGKPVRIMWSQ 88
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 75/133 (56%), Gaps = 1/133 (0%)
Query: 11 RETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLF 70
RE G +AFV + + + + ++ R +L + ++VN++ P + +F
Sbjct: 41 REPGNDP-YAFVEFTNHQSASTALAAMNKRLFLDKEMKVNWATSPGNQPKQDTSNHHHIF 99
Query: 71 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 130
VG+LS + TE+L +AF +G + R++ D ++ +S+GY FV + KAE E A++++NG
Sbjct: 100 VGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNG 159
Query: 131 VELEGRAMRVSLA 143
L R++R + +
Sbjct: 160 QWLGSRSIRTNWS 172
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 76/157 (48%), Gaps = 24/157 (15%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD-KPKP--- 57
+S ++ D +T +S+G+AFV+ + I+ ++G+ R +R N+S KP P
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPKT 181
Query: 58 -------KLPLYAE-------TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE 103
K P + E T+ ++ G + +T + + + F ++G + RV D
Sbjct: 182 EKAAQRAKQPTFDEVYNQSSPTNCTVYCGGFTTGLTEDLMQKTFSQFGVIQDIRVFKD-- 239
Query: 104 SGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 140
+GY F+ ++TK A+E+++ E+ G+ ++
Sbjct: 240 ----KGYAFIKFATKESATHAIETIHNTEINGQMVKC 272
>gi|20257711|gb|AAM16021.1| glycine-rich RNA binding protein [Zea mays]
Length = 150
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 9 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 68
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
+A+E +NG EL+GR + V+ AQ
Sbjct: 69 SAIEGMNGKELDGRNITVNEAQ 90
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRET RSRGF FVT ST + + IE ++G+E GR + VN
Sbjct: 44 IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVN 87
>gi|258578315|ref|XP_002543339.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
gi|237903605|gb|EEP78006.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
Length = 582
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 76/146 (52%), Gaps = 12/146 (8%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD 66
++ DR +GRS+G +V E I+ L G++ LG + F++ K K AE
Sbjct: 226 IVKDRVSGRSKGVGYVEFKNEESVPVAIQ-LTGQKLLGIPIIAQFTEAEKNKAARNAEGH 284
Query: 67 ----------FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
+L+VGN+ +S+T L F+ +G + ++ D E+GRSRGYGFV +
Sbjct: 285 VSGNQNSIPFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQKD-ENGRSRGYGFVQFR 343
Query: 117 TKAEMETALESLNGVELEGRAMRVSL 142
+ ALE +NG +L GR +RV L
Sbjct: 344 DPNQAREALEKMNGFDLAGRPIRVGL 369
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 52 SDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 111
S P+P+L +FV L+ + T+ L F++ G V A+++ D SGRS+G G
Sbjct: 180 SKTPEPQLTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSKGVG 239
Query: 112 FVCYSTKAEMETALESLNGVELEG 135
+V + + + A++ L G +L G
Sbjct: 240 YVEFKNEESVPVAIQ-LTGQKLLG 262
>gi|449486948|ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 173
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 56/81 (69%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K+FVG LS+ + LT+AF +YG VV ARV+ D ++GRSRG+GFV + + +A+++
Sbjct: 41 KVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGFVTFGASEDASSAIQA 100
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
L+G +L+GR +R S A R S
Sbjct: 101 LDGQDLDGRRIRCSYATDRAS 121
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
V+ DR+TGRSRGF FVT ED ++ I+ LDG++ GR +R +++
Sbjct: 71 VIMDRDTGRSRGFGFVTFGASEDASSAIQALDGQDLDGRRIRCSYA 116
>gi|449439323|ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 171
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 56/81 (69%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
K+FVG LS+ + LT+AF +YG VV ARV+ D ++GRSRG+GFV + + +A+++
Sbjct: 41 KVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGFVTFGASEDASSAIQA 100
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
L+G +L+GR +R S A R S
Sbjct: 101 LDGQDLDGRRIRCSYATDRAS 121
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
V+ DR+TGRSRGF FVT ED ++ I+ LDG++ GR +R +++
Sbjct: 71 VIMDRDTGRSRGFGFVTFGASEDASSAIQALDGQDLDGRRIRCSYA 116
>gi|358383610|gb|EHK21274.1| hypothetical protein TRIVIDRAFT_116557, partial [Trichoderma virens
Gv29-8]
Length = 466
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 71/135 (52%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+ + + FV ++ L+GR +RVN++ + F +FV
Sbjct: 112 KNAKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTTSKEDTSNHFHIFV 171
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS V + L QAF +G+V ARV++D ++GRSRGYGFV + + + E AL S++G
Sbjct: 172 GDLSNEVNDDILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGE 231
Query: 132 ELEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 232 WLGSRAIRCNWANQK 246
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKP-- 57
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P
Sbjct: 193 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSM 251
Query: 58 --------------------KLPLYAETDFKL------------FVGNLSWSVTTESLTQ 85
+ P + +++ +VGNL+ T +
Sbjct: 252 AQQQAMQAMGMTPTTPFGHHQFPAHGIASYEMILAQTPNWQTTCYVGNLTPYTTPNDVVP 311
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ T A+ +NG + GR ++ S +
Sbjct: 312 LFQNFGFVVESRFQAD------RGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKD 365
Query: 146 R 146
+
Sbjct: 366 K 366
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+++L
Sbjct: 79 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGYNYGFVEYDDPGAAERAMQTL 137
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 138 NGRRVHQSEIRVNWA 152
>gi|354545437|emb|CCE42165.1| hypothetical protein CPAR2_807140 [Candida parapsilosis]
Length = 420
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 76/136 (55%), Gaps = 12/136 (8%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPKPKLPLYAETDFKLFV 71
+AF+ ++ + + L+G+ +RVN++ P+ P Y LFV
Sbjct: 96 YAFIEFDDNQEADMALSTLNGKLLNNCEIRVNWAYQSATIASSSTPEDPTY-----NLFV 150
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS V E+L +AF ++ + A V++D ++ RSRGYGFV +S + + E AL+++NG
Sbjct: 151 GDLSSEVNDEALKKAFNKFDSFKEAHVMWDMQTSRSRGYGFVTFSKQEDAELALQTMNGA 210
Query: 132 ELEGRAMRVSLAQGRR 147
L GRA+R + A ++
Sbjct: 211 WLGGRAIRCNWAAHKQ 226
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
V++D +T RSRG+ FVT S ED ++ ++G GR +R N++
Sbjct: 177 VMWDMQTSRSRGYGFVTFSKQEDAELALQTMNGAWLGGRAIRCNWA 222
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFVG LS+ T ESL +AF +YGN+ V+ D E+GRSRG+GFV Y + + AL+
Sbjct: 6 KLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDG 65
Query: 128 LNGVELEGRAMRVSLA 143
+NG ++GR +RV A
Sbjct: 66 MNGKSVDGRTIRVDEA 81
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++K+ V+ D+ETGRSRGF FV ED ++ ++G+ GR +RV+
Sbjct: 31 IAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDGMNGKSVDGRTIRVD 79
>gi|41055734|ref|NP_956476.1| TIA1 cytotoxic granule-associated RNA binding protein 1 [Danio
rerio]
gi|28277744|gb|AAH45485.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
gi|44890544|gb|AAH66734.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
Query: 37 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 96
++GR+ LG+ ++VN++ P + F +FVG+LS ++T+ + AF +G + A
Sbjct: 68 MNGRKILGKDMKVNWASTPSSQKKD-TSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDA 126
Query: 97 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
RV+ D +G+S+GYGF+ + K + E+A++ +NG L GR +R + A
Sbjct: 127 RVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWA 173
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 26/158 (16%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ F++ D + I+ ++G+ GR +R N++ + KP P
Sbjct: 123 ISDARVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATR-KPSAPK 181
Query: 62 ------------YAE-------TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDG 102
Y E ++ ++ G ++ ++ + + Q F +G ++ RV +
Sbjct: 182 SNNEGASSKHLSYEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPE- 240
Query: 103 ESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 140
+GY FV + + A+ S+NG +EG ++
Sbjct: 241 -----KGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKC 273
>gi|410263248|gb|JAA19590.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410263254|gb|JAA19593.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 21/147 (14%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK----- 68
G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQLK 284
Query: 69 -----------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S+
Sbjct: 285 QERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSS 342
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQ 144
E A+ +NG + + + V+LAQ
Sbjct: 343 PEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D +G+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|339626955|ref|YP_004718598.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus TPY]
gi|379008663|ref|YP_005258114.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus DSM
10332]
gi|339284744|gb|AEJ38855.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus TPY]
gi|361054925|gb|AEW06442.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus DSM
10332]
Length = 85
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNL+WS T E L QAF ++ V+ AR++ D E+GRSRG+GFV + + + E A+E++
Sbjct: 5 LYVGNLAWSTTEEELAQAFAQHAQVISARIITDRETGRSRGFGFVEVADQ-DAEQAVEAM 63
Query: 129 NGVELEGRAMRVSLAQGRRS 148
NG +L GR + V+ A+ R+S
Sbjct: 64 NGTQLGGRDIIVNEARPRQS 83
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLY 62
++ DRETGRSRGF FV ++ +D +E ++G + GR + VN + +P+ Y
Sbjct: 34 IITDRETGRSRGFGFVEVAD-QDAEQAVEAMNGTQLGGRDIIVN---EARPRQSRY 85
>gi|432095458|gb|ELK26654.1| Polyadenylate-binding protein 4 [Myotis davidii]
Length = 657
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
TG+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 223 TGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI---FVGRAQKKVERQAELKRKFEQL 279
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A V+ E GRS+G+GFVC+S
Sbjct: 280 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITRAEVML--EDGRSKGFGFVCFS 337
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 338 SPEEATKAVTEMNGRIVGSKPLYVALAQ 365
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 133 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 192
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D +G+S+G+GFV Y + A+E +NG E
Sbjct: 193 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PTGKSKGFGFVSYEKHEDANKAVEEMNGKE 251
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 252 ISGKVIFVGRAQKK 265
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
+F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A+E +
Sbjct: 97 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEKM 154
Query: 129 NGVELEGRAMRVSLAQGRR 147
NG+ L R + V + R+
Sbjct: 155 NGMLLNDRKVFVGRFKSRK 173
>gi|431894424|gb|ELK04224.1| Polyadenylate-binding protein 1-like protein [Pteropus alecto]
Length = 512
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 19/159 (11%)
Query: 1 MLSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV----------- 49
MLS + V+ D ++G SRGF FV E+ + +++G+E GR+L V
Sbjct: 222 MLS-VKVMRD-DSGHSRGFGFVNFEKHEEAQKAVMDMNGKEVRGRLLYVGRAQKRMERQN 279
Query: 50 ----NFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG 105
F + +L Y L+V NL S+ E L + F YG + A+V+ +G G
Sbjct: 280 ELKRKFEQMKQDRLNRYHVRGVNLYVKNLDDSINDEKLRKEFSPYGMITSAKVMTEG--G 337
Query: 106 RSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
S+G+GFVC+S+ E A+ +NG + + + V+LAQ
Sbjct: 338 HSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 376
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A++ D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEVIKGQPIRIMWSQR-DPGLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D SRG+GFV + T + A
Sbjct: 99 GN--IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHG--SRGFGFVHFETHEAAQLA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+ ++NG+ L R + V + R+
Sbjct: 155 ISTMNGMLLNDRKVFVGHFKSRQ 177
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV-NFSDKPKPKLPLYAET-DF-KLFVG 72
SRGF FV T E I ++G R + V +F + + + L A +F ++V
Sbjct: 137 SRGFGFVHFETHEAAQLAISTMNGMLLNDRKVFVGHFKSRQEREAELGARAMEFTNIYVK 196
Query: 73 NLSWSVTTESLTQAFQEY-----GNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
NL + L + F ++ G ++ +V+ D +SG SRG+GFV + E + A+
Sbjct: 197 NLQVDMDEWGLQELFSQFDWSSPGKMLSVKVMRD-DSGHSRGFGFVNFEKHEEAQKAVMD 255
Query: 128 LNGVELEGRAMRVSLAQGR 146
+NG E+ GR + V AQ R
Sbjct: 256 MNGKEVRGRLLYVGRAQKR 274
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P PL + L+VG+L VT L + F G ++ RV D + RS GY ++ +
Sbjct: 6 PIFPLAS-----LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
A+ E AL+++N ++G+ +R+ +Q
Sbjct: 61 QPADAERALDTMNFEVIKGQPIRIMWSQ 88
>gi|403292058|ref|XP_003937074.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 659
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 21/147 (14%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK----- 68
G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQLK 284
Query: 69 -----------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S+
Sbjct: 285 QERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSS 342
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQ 144
E A+ +NG + + + V+LAQ
Sbjct: 343 PEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D +G+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|193785136|dbj|BAG54289.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 160 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 218
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 219 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 278
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 279 CAKKALEQLNGFELAGRPMKV 299
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 252 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 299
>gi|119627673|gb|EAX07268.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_h [Homo sapiens]
Length = 661
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 21/147 (14%)
Query: 14 GRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK----- 68
G+S+GF FV+ ED N +E ++G+E G+I+ F + + K+ AE K
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII---FVGRAQKKVERQAELKRKFEQLK 284
Query: 69 -----------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 117
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S+
Sbjct: 285 QERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSS 342
Query: 118 KAEMETALESLNGVELEGRAMRVSLAQ 144
E A+ +NG + + + V+LAQ
Sbjct: 343 PEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D +G+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKIIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|108710322|gb|ABF98117.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 153
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 56/81 (69%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ +++ FVG L+W+ SL AF YG ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRD 64
Query: 124 ALESLNGVELEGRAMRVSLAQ 144
A+E +NG EL+GR + V+ AQ
Sbjct: 65 AIEGMNGKELDGRNITVNEAQ 85
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT S+ + IE ++G+E GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVN 82
>gi|50881454|gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza sativa Japonica
Group]
gi|108710320|gb|ABF98115.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|154550663|gb|ABS83497.1| receptor-like serine threonine kinase [Oryza sativa Japonica Group]
gi|169244423|gb|ACA50485.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|215697732|dbj|BAG91726.1| unnamed protein product [Oryza sativa Japonica Group]
gi|306415943|gb|ADM86846.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
Length = 162
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 56/81 (69%)
Query: 64 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 123
+ +++ FVG L+W+ SL AF YG ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRD 64
Query: 124 ALESLNGVELEGRAMRVSLAQ 144
A+E +NG EL+GR + V+ AQ
Sbjct: 65 AIEGMNGKELDGRNITVNEAQ 85
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT S+ + IE ++G+E GR + VN
Sbjct: 39 IINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVN 82
>gi|349604477|gb|AEQ00017.1| RNA-binding protein 39-like protein, partial [Equus caballus]
Length = 374
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 167 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 225
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 226 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 285
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 286 CAKKALEQLNGFELAGRPMKV 306
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 259 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 306
>gi|410966840|ref|XP_003989935.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Felis catus]
Length = 660
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKVIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|395853068|ref|XP_003799042.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Otolemur
garnettii]
Length = 662
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKVIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|344287653|ref|XP_003415567.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Loxodonta
africana]
Length = 660
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKVIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|338721949|ref|XP_003364451.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Equus
caballus]
Length = 660
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKVIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|57997079|emb|CAB66834.2| hypothetical protein [Homo sapiens]
Length = 631
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 8 LYDRETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI---------LRVNFS 52
L E+G+S+GF FV+ ED ++ ++G+E Y+GR L+ F
Sbjct: 222 LMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFE 281
Query: 53 DKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 112
+ ++ Y + L+V NL + E L +AF +G + A+V+ +G GRS+G+GF
Sbjct: 282 QMKQDRITRYQVVN--LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGF 337
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
VC+S+ E A+ +NG + + + V+LAQ
Sbjct: 338 VCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ + D T S +A+V +D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKPVRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +FV NL S+ ++L +GN++ V+ D E+G S+GYGFV + T E A
Sbjct: 99 GN--IFVKNLDKSINNKALYDTVSAFGNILSCNVVCD-ENG-SKGYGFVHFETHEAAERA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
++ +NG+ L GR + V + R+
Sbjct: 155 IKKMNGMLLNGRKVFVGQFKSRK 177
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV-NFSDKPKPKLPLYAET-DFK-LFVG 72
S+G+ FV T E I+ ++G GR + V F + + + L A +F +++
Sbjct: 137 SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N + E L F ++G + ++ D ESG+S+G+GFV + + + A++ +NG E
Sbjct: 197 NFGEDMDDERLKDLFGKFGPALSVELMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
L G+ + V AQ +
Sbjct: 256 LNGKQIYVGRAQKK 269
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P P Y L+VG+L VT L + F G ++ R+ D + S Y +V +
Sbjct: 3 PSTPSYPTAS--LYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E AL+++N ++G+ +R+ +Q
Sbjct: 61 HTKDAEHALDTMNFDVIKGKPVRIMWSQ 88
>gi|410898224|ref|XP_003962598.1| PREDICTED: polyadenylate-binding protein 4-like [Takifugu rubripes]
Length = 653
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 15/145 (10%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP-------KPKLPLYAET 65
TG+SRGF FV+ ED N +E+++G E G+ + V + K K K + +
Sbjct: 227 TGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQE 286
Query: 66 DF------KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S+
Sbjct: 287 RISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EEGRSKGFGFVCFSSPE 344
Query: 120 EMETALESLNGVELEGRAMRVSLAQ 144
E A+ +NG + + + V+LAQ
Sbjct: 345 EATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T + + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N + E L + F +YG + +V+ D +G+SRG+GFV Y + A+E +NG E
Sbjct: 197 NFGDDMDDERLKELFDKYGKTLSVKVMMD-PTGKSRGFGFVSYEKHEDANKAVEDMNGTE 255
Query: 133 LEGRAMRVSLAQGR 146
L G+ + V AQ +
Sbjct: 256 LNGKTVFVGRAQKK 269
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V S D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFSQPADAERALDTMNFDVVKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQDAADRA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L +T L + F G V+ RV D + RS GY +V +S A+ E AL+++
Sbjct: 13 LYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVVKGKPIRIMWSQ 88
>gi|351713677|gb|EHB16596.1| Polyadenylate-binding protein 4 [Heterocephalus glaber]
Length = 661
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKVIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|344287651|ref|XP_003415566.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Loxodonta
africana]
Length = 644
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL + F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 ISGKVIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|281346065|gb|EFB21649.1| hypothetical protein PANDA_004543 [Ailuropoda melanoleuca]
Length = 497
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 151 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 209
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 210 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 269
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 270 CAKKALEQLNGFELAGRPMKV 290
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 243 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 290
>gi|449488383|ref|XP_002188190.2| PREDICTED: nucleolysin TIA-1-like, partial [Taeniopygia guttata]
Length = 537
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+T + + FV S A + ++GR+ +G+ ++VN++ P + F +FV
Sbjct: 41 DTAGNDPYCFVEFSEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKK-DTSNHFHVFV 99
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS +TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A++ + G
Sbjct: 100 GDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQ 159
Query: 132 ELEGRAMRVSLA 143
L GR +R + A
Sbjct: 160 WLGGRQIRTNWA 171
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 21/149 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I+ + G+ GR +R N++ + KP P
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR-KPPAP- 178
Query: 62 YAETDFKLFVGNLSWSVTTES-----------LTQAFQEYGNVVGARVLYDGESGRSRGY 110
++ F+ G LS V E+ + Q F +G ++ RV D +GY
Sbjct: 179 --KSTFESRSGPLSPRVPDEAVQSVLPAPEQLMRQTFSPFGQIMEIRVFPD------KGY 230
Query: 111 GFVCYSTKAEMETALESLNGVELEGRAMR 139
FV +S+ A+ S+NG +EG ++
Sbjct: 231 SFVRFSSHESAAHAIVSVNGTTIEGHVVK 259
>gi|358397912|gb|EHK47280.1| hypothetical protein TRIATDRAFT_165657, partial [Trichoderma
atroviride IMI 206040]
Length = 465
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 71/135 (52%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFV 71
+ + + FV + + L+GR +RVN++ + F +FV
Sbjct: 111 KNAKGYNYGFVEYDDPGAADRAMATLNGRRVHQSEIRVNWAYQSNTTTKEDTSNHFHIFV 170
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
G+LS V + L QAF +G+V ARV++D ++GRSRGYGFV + + + E AL S++G
Sbjct: 171 GDLSNEVNDDILHQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGE 230
Query: 132 ELEGRAMRVSLAQGR 146
L RA+R + A +
Sbjct: 231 WLGSRAIRCNWANQK 245
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKP-- 57
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P
Sbjct: 192 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSM 250
Query: 58 --------------------KLPLYAETDFKL------------FVGNLSWSVTTESLTQ 85
+ P + +++ +VGNL+ T +
Sbjct: 251 AQQQAMQAMGMTPTTPFGHHQFPAHGIASYEMILAQTPNWQTTCYVGNLTPYTTHTDVVP 310
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV +R D RG+ F+ T A+ +NG + GR ++ S +
Sbjct: 311 LFQNFGFVVESRFQAD------RGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKD 364
Query: 146 R 146
+
Sbjct: 365 K 365
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y + A+ +L
Sbjct: 78 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGYNYGFVEYDDPGAADRAMATL 136
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 137 NGRRVHQSEIRVNWA 151
>gi|221041852|dbj|BAH12603.1| unnamed protein product [Homo sapiens]
Length = 337
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 27 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 85
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 86 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 145
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 146 CAKKALEQLNGFELAGRPMKV 166
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 119 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 166
>gi|410055060|ref|XP_003953766.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391517|ref|XP_004062119.1| PREDICTED: RNA-binding protein 39 isoform 6 [Gorilla gorilla
gorilla]
gi|20988961|gb|AAH30493.1| Rbm39 protein [Mus musculus]
gi|34364789|emb|CAE45833.1| hypothetical protein [Homo sapiens]
gi|111598490|gb|AAH82607.1| Rbm39 protein [Mus musculus]
gi|119596570|gb|EAW76164.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_d [Homo
sapiens]
gi|149030835|gb|EDL85862.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_g [Rattus
norvegicus]
Length = 367
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 27 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 85
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 86 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 145
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 146 CAKKALEQLNGFELAGRPMKV 166
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 119 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 166
>gi|116191711|ref|XP_001221668.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
gi|88181486|gb|EAQ88954.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
Length = 413
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 68/125 (54%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV ++ L+GR +RVN++ + F +FVG+LS V
Sbjct: 71 YGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEV 130
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
E L QAF +G+V ARV++D ++GRSRGYGFV + + + E AL S++G L RA+
Sbjct: 131 NDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAI 190
Query: 139 RVSLA 143
R + A
Sbjct: 191 RCNWA 195
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 45/182 (24%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSDK---PK- 56
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N++++ P
Sbjct: 145 VSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSM 203
Query: 57 ------------PKLPLYAETDFK--------------------LFVGNLSWSVTTESLT 84
P P Y F +VGNL+ T + +
Sbjct: 204 AQQQAMQQMGMTPTTP-YGHHHFPTHGVHSYDMIVNQTPAWQTTCYVGNLTPYTTQQDIV 262
Query: 85 QAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
FQ +G VV +R D RG+ FV T A+ LNG + GR ++ S +
Sbjct: 263 PLFQNFGFVVESRFQAD------RGFSFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 316
Query: 145 GR 146
+
Sbjct: 317 DK 318
>gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 27 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIVVQASQAEKNRAAAMANNL 85
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 86 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 145
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 146 CAKKALEQLNGFELAGRPMKV 166
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 119 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 166
>gi|20257675|gb|AAM16003.1| glycine-rich RNA binding protein [Zea mays]
Length = 156
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 14 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 73
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
+A+E +NG EL+GR + V+ AQ
Sbjct: 74 SAIEGMNGKELDGRNITVNEAQ 95
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRET RSRGF FVT ST + + IE ++G+E GR + VN
Sbjct: 49 IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVN 92
>gi|20257669|gb|AAM16000.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 14 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 73
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
+A+E +NG EL+GR + V+ AQ
Sbjct: 74 SAIEGMNGKELDGRNITVNEAQ 95
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRET RSRGF FVT ST + + IE ++G+E GR + VN
Sbjct: 49 IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVN 92
>gi|395859409|ref|XP_003802032.1| PREDICTED: probable RNA-binding protein 23 [Otolemur garnettii]
Length = 449
Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 75/147 (51%), Gaps = 8/147 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V ++ I L G++ LG + V S K +L A
Sbjct: 202 IISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQQLLGVPIIVQASQAEKNRLAAMANNL 260
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
LFVG+L +++T + L F+ +G + ++ D ++GRS+GYGF+ +S
Sbjct: 261 QKGSSGPMHLFVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 320
Query: 120 EMETALESLNGVELEGRAMRVSLAQGR 146
ALE LNG EL GR M+V R
Sbjct: 321 CARRALEQLNGFELAGRPMKVGQVTER 347
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D +TGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 294 IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMKV 341
>gi|327357360|gb|EGE86217.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces dermatitidis ATCC 18188]
Length = 492
Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 68/128 (53%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV + L+GR +RVN++ + F +FVG+LS V
Sbjct: 134 YGFVEYDDPGAAERAMATLNGRRVHQSEIRVNWAYQSNNSNKEDTSNHFHIFVGDLSNEV 193
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
E L QAF +G+V ARV++D ++GRSRGYGFV + + + E AL S++G L RA+
Sbjct: 194 NDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAI 253
Query: 139 RVSLAQGR 146
R + A +
Sbjct: 254 RCNWANQK 261
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 43/181 (23%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLG-RILRVNFSD-KPKPKL 59
+S+ V++D +TGRSRG+ FV D + ++DG E+LG R +R N+++ K +P +
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDG-EWLGSRAIRCNWANQKGQPSI 266
Query: 60 ----------------------PLYAETDFKL------------FVGNLSWSVTTESLTQ 85
P + + + +VGNL+ T L
Sbjct: 267 SQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIP 326
Query: 86 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQG 145
FQ +G VV R D RG+ FV T A+ L+G + GR ++ S +
Sbjct: 327 LFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKD 380
Query: 146 R 146
R
Sbjct: 381 R 381
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L++G L VT + L Q F+ G+V +++ D S + YGFV Y E A+ +L
Sbjct: 94 LYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNS-KGLNYGFVEYDDPGAAERAMATL 152
Query: 129 NGVELEGRAMRVSLA 143
NG + +RV+ A
Sbjct: 153 NGRRVHQSEIRVNWA 167
>gi|310790913|gb|EFQ26446.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 474
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 11/121 (9%)
Query: 23 TMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTES 82
T + E+ + + LD G+ R + SDK LFVG+L+W+V S
Sbjct: 194 TEAKTEEPSKKRKALDDPVIPGKKARTDVSDKSS-----------TLFVGSLAWAVDDNS 242
Query: 83 LTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSL 142
L +AFQE+ ++ GARV+ D +GRSRG+G+V ++T ALE G EL GRAM +
Sbjct: 243 LYEAFQEFADLTGARVVTDKATGRSRGFGYVDFATPEAAAAALEGSQGRELAGRAMNIDF 302
Query: 143 A 143
+
Sbjct: 303 S 303
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 23/163 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK--- 58
L+ V+ D+ TGRSRGF +V +T E A +E GRE GR + ++FS + KP
Sbjct: 253 LTGARVVTDKATGRSRGFGYVDFATPEAAAAALEGSQGRELAGRAMNIDFSGQ-KPAGDG 311
Query: 59 --------------LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
+ E+D LFVGNL + V +++ F V R+ D E+
Sbjct: 312 NHQARASDRAQRHGDTVSPESD-TLFVGNLPFDVDQDTVNAFFSTAAEVTSVRLPTDPET 370
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVEL----EGRAMRVSLA 143
G +G+G+V +++ + +TA LNG + GRA+R+ A
Sbjct: 371 GNLKGFGYVSFNSIDDAKTAFAQLNGQYVGEGRSGRAVRLDFA 413
>gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA binding protein [Danio rerio]
gi|160773363|gb|AAI55270.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
Query: 37 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 96
++GR+ LG+ ++VN++ P + F +FVG+LS ++T+ + AF +G + A
Sbjct: 68 MNGRKILGKDMKVNWASTPSSQKKD-TSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDA 126
Query: 97 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 143
RV+ D +G+S+GYGF+ + K + E+A++ +NG L GR +R + A
Sbjct: 127 RVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWA 173
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 26/158 (16%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ F++ D + I+ ++G+ GR +R N++ + KP P
Sbjct: 123 ISDARVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATR-KPSAPK 181
Query: 62 ------------YAE-------TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDG 102
Y E ++ ++ G ++ ++ + + Q F +G ++ RV +
Sbjct: 182 SNNEGASSKHLSYEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPE- 240
Query: 103 ESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 140
+GY FV + + A+ S+NG +EG ++
Sbjct: 241 -----KGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKC 273
>gi|409049501|gb|EKM58978.1| hypothetical protein PHACADRAFT_249120 [Phanerochaete carnosa
HHB-10118-sp]
Length = 338
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 82/144 (56%), Gaps = 16/144 (11%)
Query: 6 TVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYL--GRILRVNFSDKPKPKLPLY- 62
T++ D GRSR FAF+T NAV+ RE+ G+I+ PK +P
Sbjct: 29 TIMRD-AAGRSRCFAFLTFEDPASVNAVMV----REHFLDGKII------DPKRAIPRQE 77
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
+ KLF+G L+ SVT+ES+ + F ++G VV A V+ D E+GRS+G+GFV + A +E
Sbjct: 78 HQRATKLFIGGLAGSVTSESMREFFSQFGKVVDATVMLDRETGRSKGFGFVSFEN-ANVE 136
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
L +E++G+ + V LAQ R
Sbjct: 137 PLL-GFGNLEIDGKIIDVKLAQPR 159
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
+F+G L+W T ESL + F ++G V ++ D +GRSR + F+ + A + +
Sbjct: 1 MFIGGLNWDTTDESLRKYFSQFGKVEACTIMRDA-AGRSRCFAFLTFEDPASVNAVM 56
>gi|297834512|ref|XP_002885138.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330978|gb|EFH61397.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 542
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 88/155 (56%), Gaps = 14/155 (9%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRILRVNFSD-- 53
+S + V+ D GRSRGF FV E+ +++L GR+ ++G+ L+ +
Sbjct: 226 VSSVVVMRD-GMGRSRGFGFVNFCHPENAKKAVDSLHGRQVGSKTLFVGKALKRDERREM 284
Query: 54 -KPKPKLPLYAETDFK---LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 109
K K + A+++ + L+V NLS S+ +L + F YG +V A+V+ E+GRS+G
Sbjct: 285 LKHKYRDNFIAKSNMRWSNLYVKNLSESMNDTTLREIFGRYGQIVSAKVMRH-ENGRSKG 343
Query: 110 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+GFVC+S + E + A LNG ++G+ + V +A+
Sbjct: 344 FGFVCFSNREESKQAKRYLNGFSVDGKLLVVRVAE 378
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDF-KLF 70
E G+S+GF FV T + L G G+ L V ++ + F ++
Sbjct: 144 ENGQSKGFGFVQFETEQSAVTARSALHGSMVDGKKLFVAKFINKNERVAMAGNKGFTNVY 203
Query: 71 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 130
V NL ++T + L + F +YG V V+ DG GRSRG+GFV + + A++SL+G
Sbjct: 204 VKNLIENITEDILHRLFSQYGTVSSVVVMRDG-MGRSRGFGFVNFCHPENAKKAVDSLHG 262
Query: 131 VELEGRAMRVSLAQGR 146
++ + + V A R
Sbjct: 263 RQVGSKTLFVGKALKR 278
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 71/130 (54%), Gaps = 6/130 (4%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDF-KLFV 71
TG+S +A++ + + + L+ + G+ +R+ +S + L T F L+V
Sbjct: 58 TGKSLCYAYINFDSPFSASNAMARLNHTDLKGKAMRIMWSQR---DLSYRRRTGFGNLYV 114
Query: 72 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 131
NL S+T+ L + F +G ++ +V+ E+G+S+G+GFV + T+ TA +L+G
Sbjct: 115 KNLDISITSSGLERMFNPFGVILSCKVV--EENGQSKGFGFVQFETEQSAVTARSALHGS 172
Query: 132 ELEGRAMRVS 141
++G+ + V+
Sbjct: 173 MVDGKKLFVA 182
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+LS VT + L F V+ + + +G+S Y ++ + + A+ L
Sbjct: 23 LYVGDLSPDVTEQDLIHRFSLTVPVLSVHLCRNSVTGKSLCYAYINFDSPFSASNAMARL 82
Query: 129 NGVELEGRAMRVSLAQ 144
N +L+G+AMR+ +Q
Sbjct: 83 NHTDLKGKAMRIMWSQ 98
>gi|255568699|ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 126
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFV LSWSV +SL AF +G V R++YD +SGRSRG+GFV +S + E A ++
Sbjct: 26 KLFVAGLSWSVDEKSLKDAFSSFGEVSEVRIMYDKDSGRSRGFGFVNFSKENEAVCAKDA 85
Query: 128 LNGVELEGRAMRVSLA 143
++G L GR +R+S A
Sbjct: 86 MDGKALLGRPLRISFA 101
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
+S++ ++YD+++GRSRGF FV S + + +DG+ LGR LR++F+
Sbjct: 51 VSEVRIMYDKDSGRSRGFGFVNFSKENEAVCAKDAMDGKALLGRPLRISFA 101
>gi|213514260|ref|NP_001133879.1| Nucleolysin TIAR [Salmo salar]
gi|209155676|gb|ACI34070.1| Nucleolysin TIAR [Salmo salar]
Length = 408
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 66 YCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQK-KDTSNHFHVFVGDLSPEI 124
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 125 TTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 184
Query: 139 RVSLA 143
R + A
Sbjct: 185 RTNWA 189
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 68/156 (43%), Gaps = 25/156 (16%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + KP P
Sbjct: 139 ISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPK 197
Query: 62 YAE------------------TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE 103
+ + ++ G + ++ + Q F +G ++ RV +
Sbjct: 198 NVQDNGSKQLRFEDVVNQSSPQNCTVYCGGIQSGLSEHLMRQTFSPFGQIMEIRVFPE-- 255
Query: 104 SGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY F+ +S+ A+ S+NG +E ++
Sbjct: 256 ----KGYSFIRFSSHESAAHAIVSVNGTSIECHIVK 287
>gi|30682622|ref|NP_849377.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657934|gb|AEE83334.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 153
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLF+G LSW SL AF +G+VV A+V+ D E+GRSRG+GFV ++ + A+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
++G EL GR +RV+ A R S
Sbjct: 96 MDGKELNGRHIRVNPANDRPS 116
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
V+ DRETGRSRGF FV + A I +DG+E GR +RVN ++ +P P
Sbjct: 66 VIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAND-RPSAP 118
>gi|15236359|ref|NP_193121.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|25090505|sp|Q9SVM8.1|GRP2_ARATH RecName: Full=Glycine-rich RNA-binding protein 2, mitochondrial;
Short=AtGRP2; Flags: Precursor
gi|4455314|emb|CAB36849.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|7268089|emb|CAB78427.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|18252853|gb|AAL62353.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|21553749|gb|AAM62842.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|25084267|gb|AAN72208.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|332657933|gb|AEE83333.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 158
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLF+G LSW SL AF +G+VV A+V+ D E+GRSRG+GFV ++ + A+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
++G EL GR +RV+ A R S
Sbjct: 96 MDGKELNGRHIRVNPANDRPS 116
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
V+ DRETGRSRGF FV + A I +DG+E GR +RVN ++ +P P
Sbjct: 66 VIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAND-RPSAP 118
>gi|145333039|ref|NP_001078385.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657935|gb|AEE83335.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 144
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLF+G LSW SL AF +G+VV A+V+ D E+GRSRG+GFV ++ + A+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
++G EL GR +RV+ A R S
Sbjct: 96 MDGKELNGRHIRVNPANDRPS 116
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
V+ DRETGRSRGF FV + A I +DG+E GR +RVN ++ +P P
Sbjct: 66 VIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAND-RPSAP 118
>gi|281212216|gb|EFA86376.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 562
Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 80/149 (53%), Gaps = 7/149 (4%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP---KPK 58
++ L ++ D E G+S+GF F + +EN +G+ + G+++ V + K + +
Sbjct: 212 ITNLCIMTD-EKGKSKGFGFANFEHADAAKGAVENENGKMFSGKVIYVGRAQKKLEREAE 270
Query: 59 LPLYAETDFK---LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 115
L ET ++ L++ NL S+ ++ L F YG + ++V+ D + S+G+GFVCY
Sbjct: 271 LKHKFETKYQGVNLYIKNLDDSIDSDKLRATFSAYGTITSSKVMRDDKGSSSKGFGFVCY 330
Query: 116 STKAEMETALESLNGVELEGRAMRVSLAQ 144
ST E A+ ++G + + + V+ AQ
Sbjct: 331 STPDEASKAVAEMHGRMVGSKPLYVAFAQ 359
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
++ L + D T RS +A++ D ++ L+ G+ R+ +S + P L
Sbjct: 34 VANLRICRDNTTRRSLSYAYINYHNSTDAERALDTLNNTPIKGKACRIMWSQR-DPSLRK 92
Query: 62 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 121
+ +F+ NL +V ++L F +GN++ +V+ D E+ S+G+GFV Y ++
Sbjct: 93 SGIGN--IFIKNLDKTVDHKALYDTFSAFGNILSCKVVTD-ETNTSKGFGFVHYESQESA 149
Query: 122 ETALESLNGVELEGRAMRV 140
E A+ +NG+ + + + V
Sbjct: 150 EKAIAKVNGMMINNQKVFV 168
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L V+ L + F + G V R+ D + RS Y ++ Y + E AL++L
Sbjct: 10 LYVGDLHPDVSESHLFEVFNQVGPVANLRICRDNTTRRSLSYAYINYHNSTDAERALDTL 69
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+A R+ +Q
Sbjct: 70 NNTPIKGKACRIMWSQ 85
>gi|119596573|gb|EAW76167.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Homo
sapiens]
Length = 423
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 184 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 242
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 243 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 302
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 303 CAKKALEQLNGFELAGRPMKV 323
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 276 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|799015|emb|CAA89058.1| putative glycine rich RNA binding protein [Solanum tuberosum]
Length = 175
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 58/84 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
A+ +++ FVG L+W+ T ++L+ AF +Y VV ++++ D E+GRSRG+GFV + + M
Sbjct: 2 ADVEYRCFVGGLAWATTDQTLSDAFSQYAEVVESKIINDRETGRSRGFGFVTFKDEQAMR 61
Query: 123 TALESLNGVELEGRAMRVSLAQGR 146
A+E +N +L+GR + V+ AQ R
Sbjct: 62 DAIEGMNRQDLDGRNITVNEAQSR 85
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF FVT + IE ++ ++ GR + VN
Sbjct: 37 IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNRQDLDGRNITVN 80
>gi|2826811|emb|CAA05727.1| AtGRP2 [Arabidopsis thaliana]
Length = 150
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLF+G LSW SL AF +G+VV A+V+ D E+GRSRG+GFV ++ + A+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 128 LNGVELEGRAMRVSLAQGRRS 148
++G EL GR +RV+ A R S
Sbjct: 96 MDGKELNGRHIRVNPANDRPS 116
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP 60
V+ DRETGRSRGF FV + A I +DG+E GR +RVN ++ +P P
Sbjct: 66 VIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAND-RPSAP 118
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 74/133 (55%), Gaps = 1/133 (0%)
Query: 11 RETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLF 70
RE G +AFV + + + ++ R +L + ++VN++ P + L +F
Sbjct: 41 REPGNDP-YAFVEFTNHQSAATALAAMNKRSFLDKEMKVNWATSPGNQPKLDTSNHHHIF 99
Query: 71 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 130
VG+LS + T++L +AF +G + R++ D ++ +S+GY FV + K+E E A+ ++NG
Sbjct: 100 VGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNG 159
Query: 131 VELEGRAMRVSLA 143
L R++R + +
Sbjct: 160 QWLGSRSIRTNWS 172
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 25/158 (15%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF---------- 51
+S ++ D +T +S+G+AFV+ + A I ++G+ R +R N+
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRS 181
Query: 52 -----SDKPKPKL-PLY---AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDG 102
S+ KP +Y + T+ ++ G + +T E + + F +G + RV D
Sbjct: 182 ERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNGITDELIKKTFSPFGTIQDIRVFKD- 240
Query: 103 ESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 140
+GY F+ ++TK A+ES + E+ G ++
Sbjct: 241 -----KGYAFIKFTTKEAATHAIESTHNTEINGSIVKC 273
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNL SV+ + L F + G V G +++ E G Y FV ++ TAL ++
Sbjct: 10 LYVGNLDASVSEDLLCALFSQIGAVKGCKIIR--EPGNDP-YAFVEFTNHQSAATALAAM 66
Query: 129 NGVELEGRAMRVSLA 143
N + M+V+ A
Sbjct: 67 NKRSFLDKEMKVNWA 81
>gi|296199709|ref|XP_002747282.1| PREDICTED: RNA-binding protein 39 isoform 5 [Callithrix jacchus]
Length = 504
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 158 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 216
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 217 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 276
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 277 CAKKALEQLNGFELAGRPMKV 297
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 250 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 297
>gi|194386036|dbj|BAG59582.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 157 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 215
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 216 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 275
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 276 CAKKALEQLNGFELAGRPMKV 296
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 249 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 296
>gi|125591465|gb|EAZ31815.1| hypothetical protein OsJ_15973 [Oryza sativa Japonica Group]
Length = 234
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 74/130 (56%), Gaps = 5/130 (3%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDF----KLFVGNL 74
FAFVTM+T E+ A +E L+ + +GR +RV FS + P KL+V NL
Sbjct: 65 FAFVTMATAEEAAAAVEKLNSLDVMGRTIRVEFSKSFRKPAPPPPPGTILERHKLYVSNL 124
Query: 75 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 134
W ++ + F ++ N + A+V++D SG+S GYGFV + TK E E AL L+G EL
Sbjct: 125 PWKARAPNMKEFFSKF-NPLSAKVVFDSPSGKSAGYGFVSFGTKEEAEAALTELDGKELM 183
Query: 135 GRAMRVSLAQ 144
GR +R+ Q
Sbjct: 184 GRPVRLRWRQ 193
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF 51
V++D +G+S G+ FV+ T E+ A + LDG+E +GR +R+ +
Sbjct: 147 VVFDSPSGKSAGYGFVSFGTKEEAEAALTELDGKELMGRPVRLRW 191
>gi|426241414|ref|XP_004014586.1| PREDICTED: RNA-binding protein 39 isoform 7 [Ovis aries]
Length = 367
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 27 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 85
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 86 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 145
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 146 CAKKALEQLNGFELTGRPMKV 166
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 119 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKV 166
>gi|13278367|gb|AAH04000.1| Rbm39 protein [Mus musculus]
Length = 429
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 83 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 141
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 142 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 201
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 202 CAKKALEQLNGFELAGRPMKV 222
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 175 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 222
>gi|384490131|gb|EIE81353.1| hypothetical protein RO3G_06058 [Rhizopus delemar RA 99-880]
Length = 423
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 85/151 (56%), Gaps = 10/151 (6%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD----KPKP 57
+ + + D TG++RGF V +T E A + + G E++GR +R++ +D +
Sbjct: 226 IKDVRIRMDDATGKNRGFCHVDFATQEGKEAALA-MSGNEFMGRKIRLDGADGSTRQRVK 284
Query: 58 KLPLYAETDFKLFVGNLSWSVTTES----LTQAFQEYGNVVGA-RVLYDGESGRSRGYGF 112
K Y+ K+F+ NL+ +S LT+AF ++G +VG R+ Y+ E+G +G G+
Sbjct: 285 KEESYSSATSKVFIANLNHDHDEQSHRAALTEAFSQFGTIVGDIRLPYNRETGGLKGIGY 344
Query: 113 VCYSTKAEMETALESLNGVELEGRAMRVSLA 143
+ + TK + E A++ ++GVE+ GR +R +
Sbjct: 345 IEFETKEQAEAAVKGMSGVEINGRPLRTDFS 375
>gi|224077247|ref|XP_002192236.1| PREDICTED: RNA-binding protein 39 [Taeniopygia guttata]
Length = 522
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 184 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 242
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 243 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 302
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 303 CAKKALEQLNGFELAGRPMKV 323
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 276 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|195626882|gb|ACG35271.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 203
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 61 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 120
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
+A+E +NG EL+GR + V+ AQ
Sbjct: 121 SAIEGMNGKELDGRNITVNEAQ 142
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRET RSRGF FVT ST + + IE ++G+E GR + VN
Sbjct: 96 IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVN 139
>gi|320586919|gb|EFW99582.1| glycine-rich RNA-binding protein [Grosmannia clavigera kw1407]
Length = 462
Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 53/76 (69%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLF+G L+W +L Q F+E+G V A V+ D ++GRSRG+GFV Y+ +A+ ETA+ S
Sbjct: 284 KLFIGGLAWHTEEGTLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYANEADAETAIAS 343
Query: 128 LNGVELEGRAMRVSLA 143
+N +E +GR +RV A
Sbjct: 344 MNNIEFDGRTIRVDRA 359
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
V+ DR+TGRSRGF FV + D I +++ E+ GR +RV+
Sbjct: 314 VVKDRDTGRSRGFGFVRYANEADAETAIASMNNIEFDGRTIRVD 357
>gi|242082447|ref|XP_002445992.1| hypothetical protein SORBIDRAFT_07g029220 [Sorghum bicolor]
gi|241942342|gb|EES15487.1| hypothetical protein SORBIDRAFT_07g029220 [Sorghum bicolor]
Length = 266
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 6/134 (4%)
Query: 15 RSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD--KPKPKLPLYAETDFK---L 69
++RG AFVTM + ED A + +L+ R ++V+F+ K +PK P+ + +
Sbjct: 110 KNRGLAFVTMGSEEDALAALTHLNSTILNDRKIKVDFARPRKKQPKQPVVVSNPMEKYIV 169
Query: 70 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR-SRGYGFVCYSTKAEMETALESL 128
FVGNL+W V L + F V+ A V++ + R S GY FV +S+K E A+ +
Sbjct: 170 FVGNLTWRVRNRHLRELFASAPGVISAEVIFHTTTPRRSAGYAFVSFSSKETAEAAISAF 229
Query: 129 NGVELEGRAMRVSL 142
NG L GR + V L
Sbjct: 230 NGKILMGRPINVML 243
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARV-LYDGESGRSRGYGFVCYSTKAEMETALE 126
+L N+ W T + + FQ +G+VVG + +Y + ++RG FV ++ + AL
Sbjct: 73 RLVAQNIPWDSTADEMRALFQTHGSVVGVELSMYS--ASKNRGLAFVTMGSEEDALAALT 130
Query: 127 SLNGVELEGRAMRVSLAQGRR 147
LN L R ++V A+ R+
Sbjct: 131 HLNSTILNDRKIKVDFARPRK 151
>gi|410055058|ref|XP_003316934.2| PREDICTED: uncharacterized protein LOC458443 isoform 4 [Pan
troglodytes]
gi|410055062|ref|XP_003953767.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391515|ref|XP_004062118.1| PREDICTED: RNA-binding protein 39 isoform 5 [Gorilla gorilla
gorilla]
gi|426391519|ref|XP_004062120.1| PREDICTED: RNA-binding protein 39 isoform 7 [Gorilla gorilla
gorilla]
gi|119596566|gb|EAW76160.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
gi|119596571|gb|EAW76165.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
Length = 373
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 27 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 85
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 86 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 145
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 146 CAKKALEQLNGFELAGRPMKV 166
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 119 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 166
>gi|449265754|gb|EMC76900.1| RNA-binding protein 39, partial [Columba livia]
Length = 423
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 85 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 143
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 144 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 203
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 204 CAKKALEQLNGFELAGRPMKV 224
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 177 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 224
>gi|417411155|gb|JAA52027.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 491
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 151 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 209
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 210 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 269
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 270 CAKKALEQLNGFELAGRPMKV 290
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 243 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 290
>gi|88682991|gb|AAI05542.1| RBM39 protein [Bos taurus]
Length = 528
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 188 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 246
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 247 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 306
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 307 CAKKALEQLNGFELAGRPMKV 327
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 280 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 327
>gi|35493811|ref|NP_909122.1| RNA-binding protein 39 isoform a [Homo sapiens]
gi|281182530|ref|NP_001162566.1| RNA-binding protein 39 [Papio anubis]
gi|284004921|ref|NP_001164806.1| RNA-binding protein 39 [Oryctolagus cuniculus]
gi|149733225|ref|XP_001501869.1| PREDICTED: RNA-binding protein 39 isoform 1 [Equus caballus]
gi|296199703|ref|XP_002747279.1| PREDICTED: RNA-binding protein 39 isoform 2 [Callithrix jacchus]
gi|332858224|ref|XP_003316931.1| PREDICTED: uncharacterized protein LOC458443 isoform 1 [Pan
troglodytes]
gi|335304742|ref|XP_003360012.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|344279919|ref|XP_003411733.1| PREDICTED: RNA-binding protein 39 isoform 1 [Loxodonta africana]
gi|345789986|ref|XP_864959.2| PREDICTED: RNA-binding protein 39 isoform 3 [Canis lupus
familiaris]
gi|354477982|ref|XP_003501196.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Cricetulus
griseus]
gi|397523808|ref|XP_003831910.1| PREDICTED: RNA-binding protein 39 [Pan paniscus]
gi|426391507|ref|XP_004062114.1| PREDICTED: RNA-binding protein 39 isoform 1 [Gorilla gorilla
gorilla]
gi|28201880|sp|Q14498.2|RBM39_HUMAN RecName: Full=RNA-binding protein 39; AltName: Full=Hepatocellular
carcinoma protein 1; AltName: Full=RNA-binding motif
protein 39; AltName: Full=RNA-binding region-containing
protein 2; AltName: Full=Splicing factor HCC1
gi|405194|gb|AAA16347.1| splicing factor [Homo sapiens]
gi|119596565|gb|EAW76159.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|119596567|gb|EAW76161.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|146327034|gb|AAI41836.1| RNA binding motif protein 39 [Homo sapiens]
gi|164623752|gb|ABY64678.1| RNA binding motif protein 39, isoform 1 (predicted) [Papio anubis]
gi|165971473|gb|AAI58173.1| RNA binding motif protein 39 [Homo sapiens]
gi|166831598|gb|ABY90123.1| RNA binding motif protein 39 isoform a (predicted) [Callithrix
jacchus]
gi|169731519|gb|ACA64891.1| RNA binding motif protein 39 isoform a (predicted) [Callicebus
moloch]
gi|197215647|gb|ACH53039.1| RNA binding motif protein 39 isoform a (predicted) [Otolemur
garnettii]
gi|217038339|gb|ACJ76632.1| RNA binding motif protein 39 isoform a (predicted) [Oryctolagus
cuniculus]
gi|229368730|gb|ACQ63013.1| RNA binding motif protein 39 isoform a (predicted) [Dasypus
novemcinctus]
gi|351702535|gb|EHB05454.1| RNA-binding protein 39 [Heterocephalus glaber]
gi|380783277|gb|AFE63514.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|383408125|gb|AFH27276.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|384939254|gb|AFI33232.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|410218746|gb|JAA06592.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255434|gb|JAA15684.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292900|gb|JAA25050.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292904|gb|JAA25052.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350859|gb|JAA42033.1| RNA binding motif protein 39 [Pan troglodytes]
gi|440902514|gb|ELR53299.1| RNA-binding protein 39 [Bos grunniens mutus]
Length = 530
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 184 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 242
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 243 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 302
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 303 CAKKALEQLNGFELAGRPMKV 323
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 276 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|119596572|gb|EAW76166.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_e [Homo
sapiens]
Length = 445
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 184 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 242
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 243 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 302
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 303 CAKKALEQLNGFELAGRPMKV 323
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 276 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|37681851|gb|AAQ97803.1| poly(A)-binding protein, cytoplasmic 1 [Danio rerio]
Length = 620
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 19/148 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV---------------NFSDKPK 56
E GRSRGF FV D + ++G+E GR+L V F +
Sbjct: 226 ERGRSRGFGFVNFVNHGDARRAVTEMNGKELNGRVLYVGRAQKRLERQGELKRKFEQIKQ 285
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL S+ E L + F YG + A+V+ DG G SRG+GFVC+S
Sbjct: 286 ERIQRYQGVN--LYVKNLDDSIDDEKLRKEFAPYGTITSAKVMTDG--GHSRGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVSTKPLYVALAQ 369
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV-NFSDKPKPKLPLYAET-DF-KLFVG 72
S+G+ FV T E N IE ++G R + V +F + + + + A+ +F +++
Sbjct: 137 SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKEREAEMGAKAVEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N + +E L F E+G + V+ D E GRSRG+GFV + + A+ +NG E
Sbjct: 197 NFGEDIDSEKLKNIFTEFGKTLSVCVMTD-ERGRSRGFGFVNFVNHGDARRAVTEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
L GR + V AQ R
Sbjct: 256 LNGRVLYVGRAQKR 269
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A++ D ++ ++ GR +R+ +S + P L
Sbjct: 40 IRVCRDVITRRSLGYAYINFQQPADAECALDTMNYEVIKGRPIRIMWSQR-DPGLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ N+ S+ ++L F +GN++ +V+ D E+G S+GYGFV + T+ A
Sbjct: 99 GN--IFIKNMDESIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAANRA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E++NG+ L R + V + R+
Sbjct: 155 IETMNGMLLNDRKVFVGHFKSRK 177
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P PL + L+VG+L VT L Q F G ++ RV D + RS GY ++ +
Sbjct: 6 PAYPLAS-----LYVGDLHADVTEAMLYQKFSPAGQIMSIRVCRDVITRRSLGYAYINFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
A+ E AL+++N ++GR +R+ +Q
Sbjct: 61 QPADAECALDTMNYEVIKGRPIRIMWSQ 88
>gi|19526272|gb|AAL89666.1|AF411956_7 polyA-binding protein [Takifugu rubripes]
Length = 623
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 15/145 (10%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP-------KPKLPLYAET 65
TG+SRGF FV+ ED N +E+++G E G+ + V + K K K + +
Sbjct: 227 TGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQE 286
Query: 66 DF------KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S+
Sbjct: 287 RISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EEGRSKGFGFVCFSSPE 344
Query: 120 EMETALESLNGVELEGRAMRVSLAQ 144
E A+ +NG + + + V+LAQ
Sbjct: 345 EATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T + + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N + E L + F +YG + +V+ D +G+SRG+GFV Y + A+E +NG E
Sbjct: 197 NFGDDMDDERLKELFDKYGKTLSVKVMMD-PTGKSRGFGFVSYEKHEDANKAVEDMNGTE 255
Query: 133 LEGRAMRVSLAQGR 146
L G+ + V AQ +
Sbjct: 256 LNGKTVFVGRAQKK 269
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V S D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFSQPADAERALDTMNFDVVKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQDAADRA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L +T L + F G V+ RV D + RS GY +V +S A+ E AL+++
Sbjct: 13 LYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVVKGKPIRIMWSQ 88
>gi|20257683|gb|AAM16007.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 13 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 72
Query: 123 TALESLNGVELEGRAMRVSLAQ 144
+A+E +NG EL+GR + V+ AQ
Sbjct: 73 SAIEGMNGKELDGRNITVNEAQ 94
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRET RSRGF FVT ST + + IE ++G+E GR + VN
Sbjct: 48 IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVN 91
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF-SDKPKPKLPLYAET--DFKLFVG 72
S + FV D ++ I ++ R LGR LRVN+ S + + P +T +FVG
Sbjct: 50 SDPYCFVEFVNHSDASSAITAMNARMCLGRELRVNWASSAIQQQTPHRPDTSKHHHIFVG 109
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
+LS + T L +AF +G + RV+ D + +S+GYGFV ++ K + E A+ +++G
Sbjct: 110 DLSPQIETSDLREAFSPFGEISDCRVVKDATTQKSKGYGFVSFTNKQDAENAIHTMDGSW 169
Query: 133 LEGRAMRVSLA 143
L RA+R + A
Sbjct: 170 LGSRAIRTNWA 180
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 26/163 (15%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNF-SDKPKPK-- 58
+S V+ D T +S+G+ FV+ + +D I +DG R +R N+ S KP K
Sbjct: 130 ISDCRVVKDATTQKSKGYGFVSFTNKQDAENAIHTMDGSWLGSRAIRTNWASRKPNHKET 189
Query: 59 ----------------LPLYAETDFKLFVGNLSWSVTTES-LTQAFQEYGNVVGARVLYD 101
+ ++ ++ G L+ ++E L QAF E+G +V R+ D
Sbjct: 190 GSYIGGHHRALNYDEVFAQSSPSNCTVYCGGLNQMASSEDFLRQAFDEFGEIVDIRLFKD 249
Query: 102 GESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 144
+GY F+ +++K A+ + + ++ G+A++ S +
Sbjct: 250 ------KGYAFIKFNSKESACRAIVARHNSDIGGQAVKCSWGK 286
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VGNL VT + + F + G + G ++++ E G S Y FV + ++ +A+ ++
Sbjct: 15 LYVGNLDSGVTEDLVCALFSQMGQIKGCKIIH--EPG-SDPYCFVEFVNHSDASSAITAM 71
Query: 129 NGVELEGRAMRVSLA 143
N GR +RV+ A
Sbjct: 72 NARMCLGRELRVNWA 86
>gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 27 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 85
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 86 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 145
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 146 CAKKALEQLNGFELAGRPMKV 166
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 119 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 166
>gi|41054151|ref|NP_956133.1| polyadenylate-binding protein 1-like [Danio rerio]
gi|27881953|gb|AAH44513.1| Zgc:55855 [Danio rerio]
gi|182890236|gb|AAI65470.1| Zgc:55855 protein [Danio rerio]
Length = 620
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 19/148 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV---------------NFSDKPK 56
E GRSRGF FV D + ++G+E GR+L V F +
Sbjct: 226 ERGRSRGFGFVNFVNHGDARRAVTEMNGKELNGRVLYVGRAQKRLERQGELKRKFEQIKQ 285
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL S+ E L + F YG + A+V+ DG G SRG+GFVC+S
Sbjct: 286 ERIQRYQGVN--LYVKNLDDSIDDEKLRKEFAPYGTITSAKVMTDG--GHSRGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVSTKPLYVALAQ 369
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV-NFSDKPKPKLPLYAET-DF-KLFVG 72
S+G+ FV T E N IE ++G R + V +F + + + + A+ +F +++
Sbjct: 137 SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKEREAEMGAKAVEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N + +E L F E+G + V+ D E GRSRG+GFV + + A+ +NG E
Sbjct: 197 NFGEDIDSEKLKNIFTEFGKTLSVCVMTD-ERGRSRGFGFVNFVNHGDARRAVTEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
L GR + V AQ R
Sbjct: 256 LNGRVLYVGRAQKR 269
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A++ D ++ ++ GR +R+ +S + P L
Sbjct: 40 IRVCRDVITRRSLGYAYINFQQPADAECALDTMNYEVIKGRPIRIMWSQR-DPGLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ N+ S+ ++L F +GN++ +V+ D E+G S+GYGFV + T+ A
Sbjct: 99 GN--IFIKNMDESIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAANRA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E++NG+ L R + V + R+
Sbjct: 155 IETMNGMLLNDRKVFVGHFKSRK 177
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P PL + L+VG+L VT L Q F G ++ RV D + RS GY ++ +
Sbjct: 6 PAYPLAS-----LYVGDLHADVTEAMLYQKFSPAGQIMSIRVCRDVITRRSLGYAYINFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
A+ E AL+++N ++GR +R+ +Q
Sbjct: 61 QPADAECALDTMNYEVIKGRPIRIMWSQ 88
>gi|452821825|gb|EME28851.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 149
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 58/86 (67%)
Query: 61 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 120
+ A D ++FVG L WSV + L + F +YG VV ARV+ + E+GRSRG+GFV Y+ +
Sbjct: 1 MAAVEDNRVFVGGLPWSVGEDDLRETFSKYGEVVDARVVVERETGRSRGFGFVSYAEGSS 60
Query: 121 METALESLNGVELEGRAMRVSLAQGR 146
+E + +L+G +++GR +RV+ A R
Sbjct: 61 VEECIAALDGQDMQGRTIRVNKAMSR 86
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 6/47 (12%)
Query: 7 VLYDRETGRSRGFAFVTM---STVEDCNAVIENLDGREYLGRILRVN 50
V+ +RETGRSRGF FV+ S+VE+C I LDG++ GR +RVN
Sbjct: 38 VVVERETGRSRGFGFVSYAEGSSVEEC---IAALDGQDMQGRTIRVN 81
>gi|452003351|gb|EMD95808.1| hypothetical protein COCHEDRAFT_1190998 [Cochliobolus
heterostrophus C5]
Length = 756
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 19/158 (12%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSD---------KPKP 57
V+ D+ET S+G+ FVT + VED E L+ + G+ ++V+F++ +P+
Sbjct: 73 VVLDKETRESKGYGFVTFADVEDAQRAKEELNNTQIKGKKIKVDFAEARQREGEEKRPRA 132
Query: 58 KLPLYAETD--------FKLFVGNLSWSV-TTESLTQAFQEYGNVVGARVLYDGESGRSR 108
+ AE + K+ V NL W++ T E L + F+ YG V A L +G R
Sbjct: 133 ADRIKAEREQQVKEAQVPKIIVRNLPWTIKTPEDLEKLFRSYGKVNFAN-LPKKPNGELR 191
Query: 109 GYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
G+GFV K E A++ LNG E+ GR + V A R
Sbjct: 192 GFGFVSLRGKKNAEKAMQELNGKEISGRPIAVDWAVDR 229
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+LFV +L+ VT+E LT+ F E + A V+ D E+ S+GYGFV ++ + + A E
Sbjct: 43 QLFVRSLAPDVTSEDLTEYFSESYPIKNALVVLDKETRESKGYGFVTFADVEDAQRAKEE 102
Query: 128 LNGVELEGRAMRVSLAQGRR 147
LN +++G+ ++V A+ R+
Sbjct: 103 LNNTQIKGKKIKVDFAEARQ 122
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 66 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 125
D+ +FV N+ ++V E L + FQ++G + ARV+ D ++ R +G FV + T+ +M L
Sbjct: 316 DYTVFVRNVPFTVDDERLKEHFQQFGGIRYARVVVDRDTERPKGTAFVAFFTEEDMVNCL 375
Query: 126 ESLNGVELEGRAMRVS 141
+ + V+L+ + + S
Sbjct: 376 KGVPRVKLQKKDLNKS 391
>gi|125536731|gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indica Group]
Length = 257
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%)
Query: 43 LGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDG 102
+G +L+ S P + + KLFVG LS+ +SL F YG V+ A+++ D
Sbjct: 7 IGNLLKRATSSSPALYQSIRCMSSSKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDR 66
Query: 103 ESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 146
E+GRSRG+GF+ Y++ E A+ +L+G +L+GR +RV+ A R
Sbjct: 67 ETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNTANER 110
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVN 50
++ DRETGRSRGF F+T ++ E+ +A I LDG++ GR +RVN
Sbjct: 62 IINDRETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVN 105
>gi|52545994|emb|CAH18281.2| hypothetical protein [Homo sapiens]
Length = 513
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 167 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 225
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 226 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 285
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 286 CAKKALEQLNGFELAGRPMKV 306
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 259 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 306
>gi|426241412|ref|XP_004014585.1| PREDICTED: RNA-binding protein 39 isoform 6 [Ovis aries]
gi|426241416|ref|XP_004014587.1| PREDICTED: RNA-binding protein 39 isoform 8 [Ovis aries]
Length = 373
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 27 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 85
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 86 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 145
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 146 CAKKALEQLNGFELTGRPMKV 166
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 119 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKV 166
>gi|417411216|gb|JAA52053.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 499
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 153 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 211
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 212 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 271
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 272 CAKKALEQLNGFELAGRPMKV 292
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 245 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 292
>gi|330688445|ref|NP_001193433.1| RNA-binding protein 39 [Bos taurus]
Length = 530
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 190 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 248
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 249 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 308
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 309 CAKKALEQLNGFELAGRPMKV 329
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 282 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 329
>gi|449506038|ref|XP_002188262.2| PREDICTED: nucleolysin TIAR [Taeniopygia guttata]
Length = 453
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 19 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSV 78
+ FV D A + ++GR+ LG+ ++VN++ P + F +FVG+LS +
Sbjct: 131 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEI 189
Query: 79 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 138
TTE + AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +
Sbjct: 190 TTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 249
Query: 139 RVSLA 143
R + A
Sbjct: 250 RTNWA 254
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL 61
+S V+ D TG+S+G+ FV+ D I ++ G+ GR +R N++ + P
Sbjct: 204 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 263
Query: 62 YAETDFK-----------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGES 104
E + K ++ G ++ +T + + Q F +G ++ RV +
Sbjct: 264 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--- 320
Query: 105 GRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 139
+GY FV +ST A+ S+NG +EG ++
Sbjct: 321 ---KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 352
>gi|336176066|ref|NP_001229529.1| RNA-binding protein 39 isoform d [Homo sapiens]
gi|73991836|ref|XP_865202.1| PREDICTED: RNA-binding protein 39 isoform 16 [Canis lupus
familiaris]
gi|296199705|ref|XP_002747280.1| PREDICTED: RNA-binding protein 39 isoform 3 [Callithrix jacchus]
gi|332858230|ref|XP_003316933.1| PREDICTED: uncharacterized protein LOC458443 isoform 3 [Pan
troglodytes]
gi|335304749|ref|XP_003360015.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719245|ref|XP_003363967.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|426391513|ref|XP_004062117.1| PREDICTED: RNA-binding protein 39 isoform 4 [Gorilla gorilla
gorilla]
Length = 502
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 7 VLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET- 65
++ DR + RS+G A+V V I L G+ LG + V S K + A
Sbjct: 162 MISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNL 220
Query: 66 ------DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 119
+L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+ +S
Sbjct: 221 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 280
Query: 120 EMETALESLNGVELEGRAMRV 140
+ ALE LNG EL GR M+V
Sbjct: 281 CAKKALEQLNGFELAGRPMKV 301
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV 49
+ + ++ D ETGRS+G+ F+T S E +E L+G E GR ++V
Sbjct: 254 IESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 301
>gi|348666125|gb|EGZ05953.1| hypothetical protein PHYSODRAFT_348578 [Phytophthora sojae]
Length = 356
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVG 72
GRS+G VT T E I L+ E GR + V + +P + + F+++VG
Sbjct: 124 NGRSKGCGIVTYETEEAAQNAIATLNDTELGGRKIFVREDREAQPVSAVKPKRGFRVYVG 183
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
NLSW+V + L ++ G VV A VL + +GRS+G G V Y+T+ E A+ LN E
Sbjct: 184 NLSWNVKWQELKDHMKKAGTVVHADVLEE-PNGRSKGCGLVEYATQEEAAKAIAELNNTE 242
Query: 133 LEGR 136
LEGR
Sbjct: 243 LEGR 246
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKP----------KPKLPLY 62
GRS+G V +T E+ I L+ E GR++ V +P + P
Sbjct: 214 NGRSKGCGLVEYATQEEAAKAIAELNNTELEGRLIFVREDREPEGGSISKFAKRAAAPRG 273
Query: 63 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 122
+ +L+VGNL W + L F+ G+V A + + GRSRG+G + Y+ A+
Sbjct: 274 SGEGRQLYVGNLPWETNWQQLKDLFRTVGDVERADIA-EYPDGRSRGFGIIRYTNAADAW 332
Query: 123 TALESLNGVELEGRAMRVSL 142
A+E LNG+E+EGR + V L
Sbjct: 333 QAIERLNGLEIEGRLIEVRL 352
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
+++VGNLSWS+ + L Q G V A VL +GRS+G G V Y T+ + A+ +
Sbjct: 90 RVYVGNLSWSIKWQDLKDHMQAAGPVELATVLES--NGRSKGCGIVTYETEEAAQNAIAT 147
Query: 128 LNGVELEGRAM 138
LN EL GR +
Sbjct: 148 LNDTELGGRKI 158
>gi|291399204|ref|XP_002715240.1| PREDICTED: poly A binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 644
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 13 TGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK---- 68
+G+S+GF FV+ ED N +E ++G+E G+++ F + + K+ AE K
Sbjct: 227 SGKSKGFGFVSYEKHEDANKAVEEMNGKEIGGKVI---FVGRAQKKVERQAELKRKFEQL 283
Query: 69 ------------LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
L++ NL ++ E L + F +G++ A+V+ E GRS+G+GFVC+S
Sbjct: 284 KQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGR---ILRVNFSDKPKPKLPLYAETDFKLFVG 72
S+G+AFV T E + IE ++G R + R + + +L A+ +++
Sbjct: 137 SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N V ESL F ++G + +V+ D SG+S+G+GFV Y + A+E +NG E
Sbjct: 197 NFGEEVDDESLKDLFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
+ G+ + V AQ +
Sbjct: 256 IGGKVIFVGRAQKK 269
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T RS G+A+V D ++ ++ G+ +R+ +S + P L
Sbjct: 40 IRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQR-DPSLRKSGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +F+ NL S+ ++L F +GN++ +V+ D E+G S+GY FV + T+ + A
Sbjct: 99 GN--VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGRFKSRK 177
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 69 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 128
L+VG+L VT L + F G V+ RV D + RS GY +V + A+ E AL+++
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 129 NGVELEGRAMRVSLAQ 144
N ++G+ +R+ +Q
Sbjct: 73 NFDVIKGKPIRIMWSQ 88
>gi|225447115|ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
vinifera]
gi|297739201|emb|CBI28852.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 52/76 (68%)
Query: 68 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 127
KLFV LSWSV +SL AF +G+V R++YD +SGRSRG+GFV +S + + +A ++
Sbjct: 39 KLFVAGLSWSVDEKSLKDAFSSFGDVTEVRIMYDKDSGRSRGFGFVYFSKEVDARSAKDA 98
Query: 128 LNGVELEGRAMRVSLA 143
++G GR +RVS A
Sbjct: 99 MDGKAFLGRPLRVSYA 114
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 37/51 (72%)
Query: 2 LSKLTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFS 52
++++ ++YD+++GRSRGF FV S D + + +DG+ +LGR LRV+++
Sbjct: 64 VTEVRIMYDKDSGRSRGFGFVYFSKEVDARSAKDAMDGKAFLGRPLRVSYA 114
>gi|82802753|gb|ABB92427.1| PABP3 [Gorilla gorilla]
Length = 630
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 19/148 (12%)
Query: 12 ETGRSRGFAFVTMSTVEDCNAVIENLDGRE------YLGRI---------LRVNFSDKPK 56
E+G+S+GF FV+ ED ++ ++G+E Y+GR L+ F +
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQ 285
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
++ Y + L+V NL + E L +AF +G + A+V+ +G GRS+G+GFVC+S
Sbjct: 286 DRITRYQVVN--LYVKNLDDGIDDERLWKAFSPFGTITSAKVMMEG--GRSKGFGFVCFS 341
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E A+ +NG + + + V+LAQ
Sbjct: 342 SPEEATKAVTEMNGRIVATKPLYVALAQ 369
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 16 SRGFAFVTMSTVEDCNAVIENLDGREYLGRILRV-NFSDKPKPKLPLYAET-DF-KLFVG 72
S+G+ FV T E IE ++G R + V F + + + L A +F +++
Sbjct: 137 SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGQFKSRKEREAELGARAKEFPNVYIK 196
Query: 73 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 132
N + E L F ++G + +V+ D ESG+S+G+GFV + + + A++ +NG E
Sbjct: 197 NFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKE 255
Query: 133 LEGRAMRVSLAQGR 146
L G+ + V AQ +
Sbjct: 256 LNGKQIYVGRAQKK 269
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Query: 5 LTVLYDRETGRSRGFAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE 64
+ V D T S +A+V +D + ++ G+ LR+ +S + P L
Sbjct: 40 IRVCRDLITRGSSNYAYVNFQHPKDAEHALHTMNFDVIKGKPLRIMWSQR-DPSLRKRGV 98
Query: 65 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 124
+ +FV NL S+ ++L +GN++ +V+ D E+G S+GYGFV + T E A
Sbjct: 99 GN--IFVKNLDKSINNKALYDTVSAFGNILSCKVVCD-ENG-SKGYGFVHFETHEAAERA 154
Query: 125 LESLNGVELEGRAMRVSLAQGRR 147
+E +NG+ L R + V + R+
Sbjct: 155 IEKMNGMLLNDRKVFVGQFKSRK 177
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 57 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 116
P P Y L+VG+L VT L + F G ++ RV D + S Y +V +
Sbjct: 3 PSTPSYPTA--SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQ 60
Query: 117 TKAEMETALESLNGVELEGRAMRVSLAQ 144
+ E AL ++N ++G+ +R+ +Q
Sbjct: 61 HPKDAEHALHTMNFDVIKGKPLRIMWSQ 88
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,125,015,804
Number of Sequences: 23463169
Number of extensions: 82459178
Number of successful extensions: 277385
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 18759
Number of HSP's successfully gapped in prelim test: 7321
Number of HSP's that attempted gapping in prelim test: 206393
Number of HSP's gapped (non-prelim): 61625
length of query: 148
length of database: 8,064,228,071
effective HSP length: 111
effective length of query: 37
effective length of database: 9,754,783,608
effective search space: 360926993496
effective search space used: 360926993496
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)