Query 032067
Match_columns 148
No_of_seqs 209 out of 1824
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 09:09:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032067.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/032067hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 100.0 4.5E-37 9.8E-42 248.3 8.9 140 4-147 2-157 (371)
2 PRK14288 chaperone protein Dna 100.0 2.9E-30 6.3E-35 211.1 9.9 138 5-146 2-154 (369)
3 PRK14296 chaperone protein Dna 100.0 7.1E-30 1.5E-34 209.0 8.7 138 5-147 3-164 (372)
4 PRK14286 chaperone protein Dna 100.0 1.4E-29 3.1E-34 207.2 9.1 139 5-147 3-165 (372)
5 KOG0712 Molecular chaperone (D 100.0 1.7E-29 3.8E-34 201.9 7.1 135 5-148 3-143 (337)
6 PRK14285 chaperone protein Dna 100.0 4.1E-29 8.8E-34 204.1 8.1 139 5-147 2-161 (365)
7 PRK14287 chaperone protein Dna 100.0 1.1E-28 2.3E-33 202.1 9.0 138 5-147 3-153 (371)
8 PTZ00037 DnaJ_C chaperone prot 100.0 1.1E-28 2.3E-33 204.5 8.9 134 5-146 27-164 (421)
9 PRK14276 chaperone protein Dna 100.0 1E-28 2.2E-33 202.7 8.4 138 5-147 3-161 (380)
10 PRK14279 chaperone protein Dna 100.0 9.4E-29 2E-33 203.6 8.2 139 5-147 8-188 (392)
11 PRK14301 chaperone protein Dna 100.0 2.1E-28 4.5E-33 200.5 10.1 139 5-147 3-159 (373)
12 PRK14298 chaperone protein Dna 100.0 9.3E-29 2E-33 202.8 7.5 138 5-147 4-156 (377)
13 PRK14297 chaperone protein Dna 100.0 1.4E-28 2.9E-33 202.0 8.1 139 5-147 3-163 (380)
14 PRK14294 chaperone protein Dna 100.0 4.4E-28 9.4E-33 198.2 9.8 140 4-147 2-159 (366)
15 PRK14277 chaperone protein Dna 99.9 2.8E-28 6.1E-33 200.5 8.6 139 5-147 4-170 (386)
16 PRK10767 chaperone protein Dna 99.9 3.5E-28 7.5E-33 199.1 9.0 139 5-147 3-157 (371)
17 PRK14295 chaperone protein Dna 99.9 2.2E-28 4.7E-33 201.3 7.5 138 6-147 9-181 (389)
18 PRK14278 chaperone protein Dna 99.9 3.5E-28 7.5E-33 199.5 8.2 137 6-147 3-154 (378)
19 PRK14280 chaperone protein Dna 99.9 4.7E-28 1E-32 198.6 8.1 138 5-147 3-158 (376)
20 PRK14282 chaperone protein Dna 99.9 4.9E-28 1.1E-32 198.1 8.1 140 5-147 3-167 (369)
21 PRK14284 chaperone protein Dna 99.9 6.3E-28 1.4E-32 198.7 6.5 138 6-147 1-173 (391)
22 PRK14281 chaperone protein Dna 99.9 1.7E-27 3.7E-32 196.5 8.8 139 5-147 2-178 (397)
23 PRK14291 chaperone protein Dna 99.9 1.8E-27 3.9E-32 195.5 8.8 138 5-147 2-171 (382)
24 PRK14283 chaperone protein Dna 99.9 2.5E-27 5.3E-32 194.5 7.8 136 5-147 4-161 (378)
25 KOG0713 Molecular chaperone (D 99.9 5.5E-27 1.2E-31 186.1 7.1 75 4-82 14-88 (336)
26 TIGR02349 DnaJ_bact chaperone 99.9 8.6E-27 1.9E-31 189.8 8.2 136 7-147 1-158 (354)
27 PRK14300 chaperone protein Dna 99.9 1E-26 2.2E-31 190.5 8.3 137 6-147 3-160 (372)
28 PRK14289 chaperone protein Dna 99.9 2.1E-26 4.5E-31 189.4 9.4 139 5-147 4-169 (386)
29 PRK14290 chaperone protein Dna 99.9 4.8E-26 1E-30 186.1 9.0 138 6-146 3-163 (365)
30 PRK14293 chaperone protein Dna 99.9 6.2E-26 1.4E-30 185.9 9.2 138 5-147 2-158 (374)
31 PRK14292 chaperone protein Dna 99.9 5.2E-26 1.1E-30 186.2 8.4 137 6-147 2-154 (371)
32 KOG0715 Molecular chaperone (D 99.9 1.3E-24 2.8E-29 172.5 8.7 135 4-148 41-180 (288)
33 PRK14299 chaperone protein Dna 99.9 2.4E-22 5.3E-27 159.9 8.0 68 5-77 3-70 (291)
34 PF00226 DnaJ: DnaJ domain; I 99.9 1.7E-21 3.6E-26 122.0 6.4 64 7-73 1-64 (64)
35 KOG0718 Molecular chaperone (D 99.8 2.5E-21 5.5E-26 158.9 9.0 113 6-119 9-137 (546)
36 PRK10266 curved DNA-binding pr 99.8 2.4E-21 5.3E-26 155.1 7.4 123 5-132 3-144 (306)
37 KOG0719 Molecular chaperone (D 99.8 1.7E-20 3.8E-25 142.5 10.0 93 4-100 12-104 (264)
38 KOG0716 Molecular chaperone (D 99.8 3.7E-21 8E-26 148.9 6.0 69 5-77 30-98 (279)
39 KOG0717 Molecular chaperone (D 99.8 2.8E-20 6E-25 152.6 10.0 72 3-77 5-76 (508)
40 KOG0691 Molecular chaperone (D 99.8 2.2E-20 4.7E-25 148.1 9.1 74 5-82 4-77 (296)
41 PTZ00341 Ring-infected erythro 99.8 1E-18 2.2E-23 154.1 10.0 72 5-81 572-643 (1136)
42 smart00271 DnaJ DnaJ molecular 99.8 7.7E-19 1.7E-23 108.3 6.4 59 6-67 1-59 (60)
43 cd06257 DnaJ DnaJ domain or J- 99.8 3.2E-18 7E-23 103.6 6.6 55 7-65 1-55 (55)
44 TIGR03835 termin_org_DnaJ term 99.7 1.6E-17 3.5E-22 143.7 9.6 71 6-81 2-72 (871)
45 COG2214 CbpA DnaJ-class molecu 99.7 2E-17 4.2E-22 123.9 7.2 70 3-75 3-72 (237)
46 PRK05014 hscB co-chaperone Hsc 99.7 2.6E-17 5.6E-22 121.9 7.5 72 6-77 1-75 (171)
47 KOG0624 dsRNA-activated protei 99.7 3.2E-18 7E-23 137.4 2.1 74 3-77 391-464 (504)
48 PRK01356 hscB co-chaperone Hsc 99.7 4.2E-17 9.2E-22 120.2 7.4 71 6-77 2-74 (166)
49 PRK03578 hscB co-chaperone Hsc 99.7 7.5E-17 1.6E-21 119.9 7.9 76 2-77 2-80 (176)
50 PRK00294 hscB co-chaperone Hsc 99.7 8.4E-17 1.8E-21 119.2 8.1 74 4-77 2-78 (173)
51 KOG0721 Molecular chaperone (D 99.7 7.9E-17 1.7E-21 121.4 7.5 71 5-79 98-168 (230)
52 PHA03102 Small T antigen; Revi 99.7 5.8E-17 1.3E-21 117.6 6.2 66 6-79 5-72 (153)
53 KOG0720 Molecular chaperone (D 99.6 4.8E-15 1E-19 122.0 5.6 69 5-78 234-302 (490)
54 PRK01773 hscB co-chaperone Hsc 99.5 1.9E-14 4.2E-19 106.7 7.3 72 6-77 2-76 (173)
55 PRK09430 djlA Dna-J like membr 99.5 1.1E-14 2.3E-19 114.9 5.8 60 6-65 200-262 (267)
56 KOG0550 Molecular chaperone (D 99.5 9.6E-15 2.1E-19 119.3 4.5 70 5-77 372-441 (486)
57 KOG0722 Molecular chaperone (D 99.5 9.1E-15 2E-19 112.9 3.9 70 3-77 30-99 (329)
58 PHA02624 large T antigen; Prov 99.5 2.5E-14 5.3E-19 122.5 6.6 83 5-95 10-96 (647)
59 PTZ00100 DnaJ chaperone protei 99.5 2.7E-14 5.8E-19 99.0 4.4 52 5-64 64-115 (116)
60 KOG0714 Molecular chaperone (D 99.4 8.9E-14 1.9E-18 108.5 5.1 71 5-78 2-72 (306)
61 COG5407 SEC63 Preprotein trans 99.3 1E-12 2.2E-17 108.4 5.4 73 4-76 96-169 (610)
62 TIGR00714 hscB Fe-S protein as 99.3 3.3E-12 7.3E-17 93.4 7.2 60 18-77 3-63 (157)
63 KOG1150 Predicted molecular ch 99.3 8.1E-12 1.8E-16 93.5 5.9 66 5-73 52-117 (250)
64 COG5269 ZUO1 Ribosome-associat 99.1 7.7E-10 1.7E-14 86.5 8.3 69 6-76 43-114 (379)
65 KOG0723 Molecular chaperone (D 98.7 2.8E-08 6.2E-13 67.4 4.8 51 8-66 58-108 (112)
66 KOG1789 Endocytosis protein RM 98.6 5.1E-08 1.1E-12 87.8 5.6 55 3-64 1278-1336(2235)
67 KOG0568 Molecular chaperone (D 98.5 1E-07 2.2E-12 73.4 4.4 54 7-65 48-102 (342)
68 KOG3192 Mitochondrial J-type c 98.1 6.1E-06 1.3E-10 59.8 4.7 74 4-77 6-82 (168)
69 KOG0431 Auxilin-like protein a 98.0 1.1E-05 2.5E-10 68.0 5.0 53 10-62 392-447 (453)
70 COG1076 DjlA DnaJ-domain-conta 97.6 2.8E-05 6.1E-10 57.7 2.2 58 6-63 113-173 (174)
71 COG1076 DjlA DnaJ-domain-conta 97.6 7.8E-05 1.7E-09 55.3 3.5 74 7-80 2-78 (174)
72 PF03656 Pam16: Pam16; InterP 96.7 0.0036 7.9E-08 44.2 4.8 54 8-69 60-113 (127)
73 PF14687 DUF4460: Domain of un 96.0 0.016 3.6E-07 40.0 4.9 52 17-68 5-56 (112)
74 PF13446 RPT: A repeated domai 93.9 0.2 4.3E-06 30.6 4.9 27 6-32 5-31 (62)
75 PF11833 DUF3353: Protein of u 92.6 0.31 6.8E-06 36.8 5.2 41 15-67 1-41 (194)
76 KOG0724 Zuotin and related mol 88.0 0.5 1.1E-05 38.2 3.0 58 18-75 4-61 (335)
77 COG5552 Uncharacterized conser 79.3 8.3 0.00018 24.7 5.2 29 6-34 3-31 (88)
78 KOG3442 Uncharacterized conser 72.9 6.4 0.00014 27.7 3.7 52 9-68 62-113 (132)
79 PF07092 DUF1356: Protein of u 71.4 2.5 5.5E-05 33.0 1.6 19 127-145 33-51 (238)
80 cd01388 SOX-TCF_HMG-box SOX-TC 69.9 16 0.00034 22.6 4.8 42 24-74 13-54 (72)
81 cd01390 HMGB-UBF_HMG-box HMGB- 66.0 23 0.0005 20.9 4.9 41 25-74 13-53 (66)
82 cd00084 HMG-box High Mobility 65.4 25 0.00054 20.5 5.0 42 24-74 12-53 (66)
83 cd01389 MATA_HMG-box MATA_HMG- 61.5 29 0.00062 21.6 4.9 42 24-74 13-54 (77)
84 PF10041 DUF2277: Uncharacteri 60.8 42 0.00091 21.6 5.8 30 7-36 4-33 (78)
85 PF12434 Malate_DH: Malate deh 59.0 14 0.00029 19.0 2.3 18 19-36 9-26 (28)
86 PF07709 SRR: Seven Residue Re 57.2 7.4 0.00016 16.6 1.1 13 52-64 2-14 (14)
87 PF00505 HMG_box: HMG (high mo 53.2 38 0.00082 20.1 4.3 40 24-73 12-51 (69)
88 PF07739 TipAS: TipAS antibiot 48.9 55 0.0012 21.7 5.0 50 13-75 51-101 (118)
89 TIGR02642 phage_xxxx uncharact 44.7 13 0.00028 28.0 1.3 18 127-144 110-127 (186)
90 PF08447 PAS_3: PAS fold; Int 43.8 6.2 0.00013 24.6 -0.5 30 5-38 5-35 (91)
91 PF15178 TOM_sub5: Mitochondri 42.6 33 0.00072 19.9 2.5 22 9-30 2-23 (51)
92 smart00398 HMG high mobility g 42.1 72 0.0016 18.7 4.8 42 24-74 13-54 (70)
93 PF03206 NifW: Nitrogen fixati 40.6 83 0.0018 21.4 4.7 57 4-63 13-74 (105)
94 COG3755 Uncharacterized protei 39.9 62 0.0014 22.8 4.1 42 20-72 50-92 (127)
95 cd01780 PLC_epsilon_RA Ubiquit 39.1 39 0.00084 22.6 2.8 34 5-38 10-43 (93)
96 COG0089 RplW Ribosomal protein 36.6 32 0.0007 23.0 2.1 21 11-31 25-45 (94)
97 PRK14102 nifW nitrogenase stab 36.4 1E+02 0.0022 21.0 4.6 58 4-63 13-75 (105)
98 KOG0527 HMG-box transcription 32.9 81 0.0017 25.9 4.3 42 24-74 74-115 (331)
99 PRK14607 bifunctional glutamin 32.9 3E+02 0.0064 24.0 8.0 37 106-143 240-276 (534)
100 KOG2344 Exocyst component prot 31.1 3.7E+02 0.008 24.1 8.4 75 46-124 530-615 (623)
101 CHL00030 rpl23 ribosomal prote 31.0 46 0.00099 22.1 2.2 21 11-31 23-43 (93)
102 KOG2320 RAS effector RIN1 (con 29.8 41 0.00088 29.9 2.2 27 12-38 395-421 (651)
103 PF00076 RRM_1: RNA recognitio 27.5 49 0.0011 19.1 1.7 24 11-34 3-26 (70)
104 PRK10613 hypothetical protein; 27.0 25 0.00054 22.3 0.3 11 19-29 64-74 (74)
105 PF04719 TAFII28: hTAFII28-lik 26.9 53 0.0011 21.7 1.9 13 18-30 78-90 (90)
106 TIGR03636 L23_arch archaeal ri 26.4 63 0.0014 20.6 2.2 20 11-30 18-37 (77)
107 PF00684 DnaJ_CXXCXGXG: DnaJ c 25.9 25 0.00054 21.5 0.2 17 128-144 37-53 (66)
108 COG2960 Uncharacterized protei 25.6 2.1E+02 0.0046 19.4 4.6 51 25-75 14-64 (103)
109 PF10769 DUF2594: Protein of u 25.2 28 0.00061 22.1 0.3 11 19-29 64-74 (74)
110 PF04967 HTH_10: HTH DNA bindi 24.3 27 0.00058 20.7 0.1 20 11-30 32-51 (53)
111 COG0178 UvrA Excinuclease ATPa 23.8 77 0.0017 29.5 2.9 33 111-143 702-741 (935)
112 PRK05738 rplW 50S ribosomal pr 23.4 75 0.0016 20.9 2.2 20 11-30 24-43 (92)
113 cd07356 HN_L-whirlin_R1_like F 22.8 2.2E+02 0.0048 18.3 4.2 39 24-74 21-59 (78)
114 PF04949 Transcrip_act: Transc 22.6 1.3E+02 0.0028 21.9 3.3 25 47-71 62-86 (159)
115 PF12725 DUF3810: Protein of u 21.1 1.7E+02 0.0037 23.7 4.2 60 5-65 81-148 (318)
116 TIGR00757 RNaseEG ribonuclease 20.7 46 0.00099 28.1 0.8 13 132-144 390-402 (414)
117 PF12057 DUF3538: Domain of un 20.7 85 0.0018 22.0 2.0 22 44-65 39-60 (120)
118 PRK00810 nifW nitrogenase stab 20.3 1.4E+02 0.003 20.6 3.1 65 4-72 17-88 (113)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.5e-37 Score=248.31 Aligned_cols=140 Identities=34% Similarity=0.462 Sum_probs=115.8
Q ss_pred CCcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCCC
Q 032067 4 TGACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLADD 83 (148)
Q Consensus 4 ~~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~~ 83 (148)
...|||+||||+++||.+|||+|||+||++||||++++++ +|+++|++|++||+|||||++|+.||+.+..++...
T Consensus 2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~----~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~g 77 (371)
T COG0484 2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDK----EAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAG 77 (371)
T ss_pred CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCH----HHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccC
Confidence 4689999999999999999999999999999999976655 899999999999999999999999998765543210
Q ss_pred -------C-cH-HHHHHHHHHHHhhh-----hcCCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCCCCCCC
Q 032067 84 -------D-DE-EFCDFMQEMALMME-----SVSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSARKKGS 147 (148)
Q Consensus 84 -------~-~~-~~~~~~~~~~~~~~-----~~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g~~~g~ 147 (148)
. .. .|.++|.+++.... +..+..|.+ ..++.+.|+|++.|. +.|.+.+...|++|.|+|+++||
T Consensus 78 g~gg~g~~~fgg~~~DIF~~~FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~GsGak~gt 157 (371)
T COG0484 78 GFGGFGFGGFGGDFGDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGT 157 (371)
T ss_pred CcCCCCcCCCCCCHHHHHHHhhcCCCcccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCCCCCCCCC
Confidence 0 01 46777777764221 123446666 578999999999998 78999999999999999999995
No 2
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.96 E-value=2.9e-30 Score=211.15 Aligned_cols=138 Identities=29% Similarity=0.442 Sum_probs=104.3
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCCCC
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLADDD 84 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~~~ 84 (148)
..|||+||||+++||.+|||+|||+||++||||+++.++ +|.++|++|++||+||+||.+|++||+.+..++....
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~----~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~ 77 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDK----EAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAG 77 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcc----HHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCC
Confidence 479999999999999999999999999999999975443 6889999999999999999999999996654322100
Q ss_pred --cH-------HHHHHHHHHHHhhh--h--cCCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCCCCCC
Q 032067 85 --DE-------EFCDFMQEMALMME--S--VSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSARKKG 146 (148)
Q Consensus 85 --~~-------~~~~~~~~~~~~~~--~--~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g~~~g 146 (148)
.. .|.++|..++++.+ + ..+..+.+ ...+...|++++.|+ +.|.+.+...|+.|.|+|++++
T Consensus 78 ~~~~~~~~~f~~~~~~F~~~fg~g~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~ 154 (369)
T PRK14288 78 ASQSDFSDFFEDLGSFFEDAFGFGARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDK 154 (369)
T ss_pred CCccccccchhhHHHHHHhhcCCCCcccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCcccCCC
Confidence 01 22234433322100 0 01123334 357899999999998 7799999999999999998865
No 3
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.96 E-value=7.1e-30 Score=209.01 Aligned_cols=138 Identities=29% Similarity=0.413 Sum_probs=105.0
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCCC-
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLADD- 83 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~~- 83 (148)
..|||+||||+++|+.+|||+|||+||++||||+++ ++ .|.++|++|++||++|+||.+|+.||+.+..++...
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~-~~----~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~ 77 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SP----DAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSS 77 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-Cc----hHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCC
Confidence 479999999999999999999999999999999963 22 688999999999999999999999998654322100
Q ss_pred ------C-------------cHHHHHHHHHHHHhhhh--cCCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCC
Q 032067 84 ------D-------------DEEFCDFMQEMALMMES--VSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQ 140 (148)
Q Consensus 84 ------~-------------~~~~~~~~~~~~~~~~~--~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g 140 (148)
. ...|.++|..++....+ ..+..+.+ ...+...|++++.|+ +.|.+...+.|++|.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~g~~~f~d~f~~~fggg~~~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G 157 (372)
T PRK14296 78 GFSSNFGDFEDLFSNMGSSGFSSFTNIFSDFFGSNKSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFG 157 (372)
T ss_pred CcCcCCCccccccccccccccccchhhhhhhcCCCccCCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCC
Confidence 0 01233444443321100 11223444 357899999999998 7799999999999999
Q ss_pred CCCCCCC
Q 032067 141 SARKKGS 147 (148)
Q Consensus 141 ~g~~~g~ 147 (148)
+|+++++
T Consensus 158 ~G~~~~~ 164 (372)
T PRK14296 158 SGAESNS 164 (372)
T ss_pred CccCCCC
Confidence 9998775
No 4
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.96 E-value=1.4e-29 Score=207.24 Aligned_cols=139 Identities=31% Similarity=0.450 Sum_probs=106.5
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCC--
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLAD-- 82 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~-- 82 (148)
..|||+||||+++|+.+|||+|||+|+++||||+++.++ +|.++|++|++||+||+||.+|+.||+.+..++..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~----~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~ 78 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNK----ESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGA 78 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCch----HHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhcccc
Confidence 479999999999999999999999999999999965433 68899999999999999999999999865433210
Q ss_pred -----C--C-----cHHHHHHHHHHHHhhh-h-------cCCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCC
Q 032067 83 -----D--D-----DEEFCDFMQEMALMME-S-------VSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQ 140 (148)
Q Consensus 83 -----~--~-----~~~~~~~~~~~~~~~~-~-------~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g 140 (148)
. . ...|.++|..++.... + ..+..+.+ ...+...|+|++.|+ +.|.+.+.+.|++|.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G 158 (372)
T PRK14286 79 GGFGQGAYTDFSDIFGDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNG 158 (372)
T ss_pred CCCCCCCcccccccccchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeeccccCCCCcC
Confidence 0 0 0124455555543211 0 01223444 356888999999998 7799999999999999
Q ss_pred CCCCCCC
Q 032067 141 SARKKGS 147 (148)
Q Consensus 141 ~g~~~g~ 147 (148)
+|+++++
T Consensus 159 ~G~~~~~ 165 (372)
T PRK14286 159 SGASKGS 165 (372)
T ss_pred CCcCCCC
Confidence 9998775
No 5
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.7e-29 Score=201.91 Aligned_cols=135 Identities=33% Similarity=0.467 Sum_probs=110.0
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCC--
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLAD-- 82 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~-- 82 (148)
...||+||||+++|+.+|||+|||+|+++|||||+ | .+.++|++|++||++||||++|.+||+.+.+++..
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn---~----~~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~ 75 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKN---P----DAGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGG 75 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCC---c----cHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccC
Confidence 45799999999999999999999999999999994 4 37799999999999999999999999987655432
Q ss_pred --CCcHHHHHHHHHHHHhhhhcCCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCCCCCCCC
Q 032067 83 --DDDEEFCDFMQEMALMMESVSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSARKKGSC 148 (148)
Q Consensus 83 --~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g~~~g~~ 148 (148)
.....|.+||+ ++.+.+.....|.+ ..++...+++++.|. ..+.+.....|+.|.|+|.++|+.
T Consensus 76 ~~~g~~~f~~~F~--~g~~~~~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGgksg~~ 143 (337)
T KOG0712|consen 76 GGGGFGGFSQFFG--FGGNGGRGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGGKSGSA 143 (337)
T ss_pred CCCCCccHHHhcc--CCCcCccccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCCCCCCC
Confidence 12234677776 22233333344555 578899999999886 789999999999999999999974
No 6
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.96 E-value=4.1e-29 Score=204.13 Aligned_cols=139 Identities=31% Similarity=0.427 Sum_probs=107.3
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCCC-
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLADD- 83 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~~- 83 (148)
..|||+||||+++|+.+|||+|||+|+++||||+++.++ .|.++|++|++||++|+||.+|..||..+..++...
T Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~----~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~ 77 (365)
T PRK14285 2 KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNK----EAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGG 77 (365)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH----HHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCC
Confidence 479999999999999999999999999999999965443 678999999999999999999999999664332110
Q ss_pred -------C-------cHHHHHHHHHHHHhhhh----cCCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCCC
Q 032067 84 -------D-------DEEFCDFMQEMALMMES----VSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSAR 143 (148)
Q Consensus 84 -------~-------~~~~~~~~~~~~~~~~~----~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g~ 143 (148)
. ...|.++|..++....+ ..+..|.+ ...+...|++++.|+ +.+.+.+...|..|.|+|+
T Consensus 78 ~~~~~~~g~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~ 157 (365)
T PRK14285 78 GFEGFSGGFSGFSDIFEDFGDIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKS 157 (365)
T ss_pred CccccCCCccccccccccHHHHHHHhhcCCcCCCCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCCCCCCccc
Confidence 0 01245556555432111 11223444 357888999999998 7799999999999999999
Q ss_pred CCCC
Q 032067 144 KKGS 147 (148)
Q Consensus 144 ~~g~ 147 (148)
++|+
T Consensus 158 ~~~~ 161 (365)
T PRK14285 158 EKGT 161 (365)
T ss_pred CCCC
Confidence 8775
No 7
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.95 E-value=1.1e-28 Score=202.08 Aligned_cols=138 Identities=28% Similarity=0.423 Sum_probs=106.3
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCCC-
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLADD- 83 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~~- 83 (148)
..|||+||||+++|+.+|||+|||+|+++||||+++ + ..+.++|++|++||++|+||.+|+.||+.+..++...
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~----~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~ 77 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNK-A----PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGF 77 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-C----hhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCccccccc
Confidence 479999999999999999999999999999999953 2 2678999999999999999999999999665432110
Q ss_pred ---C--c-HHHHHHHHHHHHhhhh----cCCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCCCCCCC
Q 032067 84 ---D--D-EEFCDFMQEMALMMES----VSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSARKKGS 147 (148)
Q Consensus 84 ---~--~-~~~~~~~~~~~~~~~~----~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g~~~g~ 147 (148)
. + ..|.++|..+++...+ ..+..|.+ ...+...|++++.|+ +.|.+.+.+.|+.|.|+|+++++
T Consensus 78 ~~~~~~~f~~~~d~f~~~fgg~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~ 153 (371)
T PRK14287 78 GGGGAGDFGGFSDIFDMFFGGGGGRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGT 153 (371)
T ss_pred CCCCCccccchHHHHHhhhccccCCCCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcccCCCC
Confidence 0 0 1245556555432111 11223444 356788999999998 77999999999999999998775
No 8
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.95 E-value=1.1e-28 Score=204.51 Aligned_cols=134 Identities=28% Similarity=0.391 Sum_probs=103.6
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCCC-
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLADD- 83 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~~- 83 (148)
..|||+||||+++||.+|||+|||+||++||||++ +. .++|++|++||++|+||.+|+.||..+..++...
T Consensus 27 ~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~---~~-----~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~~ 98 (421)
T PTZ00037 27 NEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKG---GD-----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGE 98 (421)
T ss_pred chhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCC---ch-----HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccCC
Confidence 46999999999999999999999999999999995 21 3799999999999999999999999765433211
Q ss_pred CcHHHHHHHHHHHHhhh-hcCCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCCCCCC
Q 032067 84 DDEEFCDFMQEMALMME-SVSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSARKKG 146 (148)
Q Consensus 84 ~~~~~~~~~~~~~~~~~-~~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g~~~g 146 (148)
...++.++|..++.... ...+..|.+ ...+...|++++.|+ +.|.+...+.|+.|.|+|++.+
T Consensus 99 ~~~d~~d~f~~~Fggg~~~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~ 164 (421)
T PTZ00037 99 QPADASDLFDLIFGGGRKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKD 164 (421)
T ss_pred CCcchhhhHHHhhccccccccccCCCCEEEEeeeeHHHHhCCCceEEEeeccccccccCCCCCCCC
Confidence 11234455554443211 111233444 467889999999998 7799999999999999998765
No 9
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.95 E-value=1e-28 Score=202.71 Aligned_cols=138 Identities=29% Similarity=0.429 Sum_probs=105.9
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCC--
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLAD-- 82 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~-- 82 (148)
..|||+||||+++|+.+|||+|||+|+++||||+++ ++ .|.++|++|++||++|+||.+|+.||+.+..++..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~----~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~ 77 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINK-EP----GAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGF 77 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-Cc----CHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCC
Confidence 479999999999999999999999999999999964 22 57889999999999999999999999865433210
Q ss_pred -----C--------CcHHHHHHHHHHHHhhhh----cCCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCCC
Q 032067 83 -----D--------DDEEFCDFMQEMALMMES----VSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSAR 143 (148)
Q Consensus 83 -----~--------~~~~~~~~~~~~~~~~~~----~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g~ 143 (148)
. ....|.++|..++...++ ..+..+.+ ...+...|++++.|+ +.|.+.+.+.|+.|.|+|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~ 157 (380)
T PRK14276 78 GGGAGGFGGFDGSGGFGGFEDIFSSFFGGGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGA 157 (380)
T ss_pred CCCCCCCCCccccccccchhhHHHHHhCccccccCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCCCCcCccc
Confidence 0 001244555555432110 11223444 356888999999998 7799999999999999999
Q ss_pred CCCC
Q 032067 144 KKGS 147 (148)
Q Consensus 144 ~~g~ 147 (148)
++|+
T Consensus 158 ~~~~ 161 (380)
T PRK14276 158 KPGT 161 (380)
T ss_pred CCCC
Confidence 8875
No 10
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.95 E-value=9.4e-29 Score=203.60 Aligned_cols=139 Identities=28% Similarity=0.360 Sum_probs=103.2
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhccc----cc
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLS----LL 80 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~----~~ 80 (148)
..|||+||||+++|+.+|||+|||+|+++||||+++.++ .|.++|++|++||++|+||.+|+.||+.+.. ++
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~----~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~ 83 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDP----AAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGF 83 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCh----HHHHHHHHHHHHHHHhcchhhhhHHHHhhhhcccccc
Confidence 479999999999999999999999999999999975443 6889999999999999999999999986431 11
Q ss_pred CC--------CC---------cHHH---------------HHHHHHHHHhhhh----cCCCCCch-HhHHHHHHHHHhcc
Q 032067 81 AD--------DD---------DEEF---------------CDFMQEMALMMES----VSPQEGYT-LEHLQGLLTDMIAN 123 (148)
Q Consensus 81 ~~--------~~---------~~~~---------------~~~~~~~~~~~~~----~~~~~g~~-~~~~~~~f~~~~~g 123 (148)
.. .. ..++ .++|..++....+ ..+..+.+ ...+...|++++.|
T Consensus 84 ~~~~~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~~~~g~di~~~l~ltLee~~~G 163 (392)
T PRK14279 84 GGRRFDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKG 163 (392)
T ss_pred ccccccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhhhhcCCCcccccCCCCCCCCeEEEEEEEHHHHhCC
Confidence 00 00 0112 2233322210000 01223444 35788899999999
Q ss_pred c-CcccccccCCCCCCCCCCCCCCC
Q 032067 124 E-QRIGFGFADGCDSHFQSARKKGS 147 (148)
Q Consensus 124 ~-~~~~~~~~~~c~~c~g~g~~~g~ 147 (148)
+ +.|.+...+.|+.|.|+|+++++
T Consensus 164 ~~~~v~~~~~~~C~~C~G~G~~~~~ 188 (392)
T PRK14279 164 VTMPLRLTSPAPCTTCHGSGARPGT 188 (392)
T ss_pred eEEEEeeeccccCCCCccccccCCC
Confidence 8 77999999999999999998875
No 11
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.95 E-value=2.1e-28 Score=200.48 Aligned_cols=139 Identities=32% Similarity=0.451 Sum_probs=106.9
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCC--
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLAD-- 82 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~-- 82 (148)
..|||+||||+++|+.++||+|||+|+++||||+++.++ +|.++|++|++||++|+||.+|+.||..+..++..
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~----~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~ 78 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNP----EAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNG 78 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCCh----HHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCC
Confidence 579999999999999999999999999999999975433 68899999999999999999999999865543211
Q ss_pred ----CC-----cHHHHHHHHHHHHhhhh-----cCCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCCCCCC
Q 032067 83 ----DD-----DEEFCDFMQEMALMMES-----VSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSARKKG 146 (148)
Q Consensus 83 ----~~-----~~~~~~~~~~~~~~~~~-----~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g~~~g 146 (148)
.. ...|.++|..++..... ..+..|.+ ...+...|++++.|+ +.+.+...+.|..|.|+|++.+
T Consensus 79 ~~~g~~~~~~~~~~f~d~f~~~fg~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~ 158 (373)
T PRK14301 79 GFGGFSSAEDIFSHFSDIFGDLFGFSGGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPG 158 (373)
T ss_pred CCCCcccccccccchHHHHHHHhhccCcccccCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccCCCCCCcccCCC
Confidence 00 12345555554331110 11223444 357889999999998 7799999999999999999876
Q ss_pred C
Q 032067 147 S 147 (148)
Q Consensus 147 ~ 147 (148)
+
T Consensus 159 ~ 159 (373)
T PRK14301 159 T 159 (373)
T ss_pred C
Confidence 5
No 12
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.95 E-value=9.3e-29 Score=202.75 Aligned_cols=138 Identities=33% Similarity=0.474 Sum_probs=106.4
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCCC-
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLADD- 83 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~~- 83 (148)
..|||+||||+++|+.+|||+|||+|+++||||+++ + ..+.++|++|++||++|+||.+|+.||+.+..++...
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~-~----~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~ 78 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNK-E----PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQY 78 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccC-C----hhHHHHHHHHHHHHHHhcchHhhhhhhhcCcccccccc
Confidence 369999999999999999999999999999999963 2 2578999999999999999999999998664432210
Q ss_pred ---------CcHHHHHHHHHHHHhhhh---cCCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCCCCCCC
Q 032067 84 ---------DDEEFCDFMQEMALMMES---VSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSARKKGS 147 (148)
Q Consensus 84 ---------~~~~~~~~~~~~~~~~~~---~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g~~~g~ 147 (148)
....|.++|..+++..++ ..+..+.+ ...+...|++++.|+ +.|.+...+.|+.|.|+|+++|+
T Consensus 79 ~~~~~~~~~~~~~~~d~f~~~Fgg~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~ 156 (377)
T PRK14298 79 SAEDIFRGADFGGFGDIFEMFFGGGGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGT 156 (377)
T ss_pred CcccccccCCcCcchhhhHhhhcCCCccCCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCCCCCCcccCCC
Confidence 001244555555432111 12233444 467888999999998 77999999999999999999876
No 13
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.95 E-value=1.4e-28 Score=202.01 Aligned_cols=139 Identities=32% Similarity=0.464 Sum_probs=106.9
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCC--
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLAD-- 82 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~-- 82 (148)
..|||+||||+++|+.++||+|||+|+++||||+++.++ .|.++|++|++||++|+||.+|+.||+.+..++..
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~----~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~ 78 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNK----EAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAG 78 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcH----HHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccC
Confidence 479999999999999999999999999999999965433 68899999999999999999999999865443210
Q ss_pred ------CC--c----HHHHHHHHHHHHhh-hh-----cCCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCC
Q 032067 83 ------DD--D----EEFCDFMQEMALMM-ES-----VSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSA 142 (148)
Q Consensus 83 ------~~--~----~~~~~~~~~~~~~~-~~-----~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g 142 (148)
.. . ..|.++|..++... .+ ..+..|.+ ...+...|++++.|+ +.|.+...+.|..|.|+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~d~f~~~fgg~~g~~~~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G 158 (380)
T PRK14297 79 GFGSGGFGGFDFSDMGGFGDIFDSFFGGGFGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTG 158 (380)
T ss_pred CCCCCCCCCcCcccccchhHHHHHHhccCccccccccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCCCccccc
Confidence 00 0 12445555554321 01 11223444 356888999999998 779999999999999999
Q ss_pred CCCCC
Q 032067 143 RKKGS 147 (148)
Q Consensus 143 ~~~g~ 147 (148)
.++|+
T Consensus 159 ~~~~~ 163 (380)
T PRK14297 159 AKPGT 163 (380)
T ss_pred ccCCC
Confidence 98875
No 14
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.95 E-value=4.4e-28 Score=198.17 Aligned_cols=140 Identities=31% Similarity=0.453 Sum_probs=106.9
Q ss_pred CCcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCCC
Q 032067 4 TGACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLADD 83 (148)
Q Consensus 4 ~~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~~ 83 (148)
...|||+||||+++|+.+|||+|||+|+++||||+++.++ ++.++|++|++||++|+||.+|+.||+.+.+++...
T Consensus 2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~----~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~ 77 (366)
T PRK14294 2 VKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDK----EAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGT 77 (366)
T ss_pred CCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCch----HHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCC
Confidence 3579999999999999999999999999999999975443 678999999999999999999999998665432110
Q ss_pred -----C--c---HHHHHHHHHHHHhhhh------cCCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCCCCC
Q 032067 84 -----D--D---EEFCDFMQEMALMMES------VSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSARKK 145 (148)
Q Consensus 84 -----~--~---~~~~~~~~~~~~~~~~------~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g~~~ 145 (148)
. . ..|.++|..++++... ..+..+.+ ...+...|++++.|+ +.+.+...+.|+.|.|+|.+.
T Consensus 78 ~~~~~~~~~~~~~~~~d~f~~~fg~g~~~~~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~G~G~~~ 157 (366)
T PRK14294 78 GFSGFSGFDDIFSSFGDIFEDFFGFGGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEP 157 (366)
T ss_pred CCCCcCccccchhhhhhhHHHhhccCCCcCCcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeecccCCCCCCccccC
Confidence 0 0 1244555555431000 01223334 356888999999998 779999999999999999987
Q ss_pred CC
Q 032067 146 GS 147 (148)
Q Consensus 146 g~ 147 (148)
++
T Consensus 158 ~~ 159 (366)
T PRK14294 158 GT 159 (366)
T ss_pred CC
Confidence 65
No 15
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.95 E-value=2.8e-28 Score=200.51 Aligned_cols=139 Identities=32% Similarity=0.477 Sum_probs=105.1
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCC--
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLAD-- 82 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~-- 82 (148)
..|||+||||+++|+.++||+|||+|+++||||+++.++ .|.++|++|++||++|+||.+|+.||..+..++..
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~----~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~ 79 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDK----EAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGG 79 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCch----HHHHHHHHHHHHHHHhCCHHHHHHHHhhccccccccc
Confidence 369999999999999999999999999999999975443 68899999999999999999999999865432210
Q ss_pred --------CC------c---HHHHHHHHHHHHh-hhhc------CCCCCch-HhHHHHHHHHHhccc-CcccccccCCCC
Q 032067 83 --------DD------D---EEFCDFMQEMALM-MESV------SPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCD 136 (148)
Q Consensus 83 --------~~------~---~~~~~~~~~~~~~-~~~~------~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~ 136 (148)
.. + ..+.++|..++.. +++. .+..+.+ ...+...|++++.|+ +.+.+.+.+.|+
T Consensus 80 ~~~~~~~~~g~~~~~~~~~~~~~~d~f~~~F~~~fgg~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C~ 159 (386)
T PRK14277 80 FGQGGFGQGGFGGGGFDFDFGGFGDIFEDIFGDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCD 159 (386)
T ss_pred cccCCcCCCCccccCccccccchhHHHHHhhcccccCCCcCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccCC
Confidence 00 0 1233444444331 1111 1223334 357888999999998 779999999999
Q ss_pred CCCCCCCCCCC
Q 032067 137 SHFQSARKKGS 147 (148)
Q Consensus 137 ~c~g~g~~~g~ 147 (148)
+|.|+|++.++
T Consensus 160 ~C~G~G~~~~~ 170 (386)
T PRK14277 160 VCKGSGAKPGS 170 (386)
T ss_pred CCCCCCcCCCC
Confidence 99999998765
No 16
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.95 E-value=3.5e-28 Score=199.05 Aligned_cols=139 Identities=33% Similarity=0.489 Sum_probs=106.4
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCCC-
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLADD- 83 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~~- 83 (148)
..|||+||||+++|+.++||+|||+|+++||||+++.++ .|.++|++|++||++|+||.+|+.||..+..++...
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~----~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~ 78 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK----EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGG 78 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcH----HHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCC
Confidence 579999999999999999999999999999999975443 588999999999999999999999998654332110
Q ss_pred -----C-----cHHHHHHHHHHHHhhhh---cCCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCCCCCCC
Q 032067 84 -----D-----DEEFCDFMQEMALMMES---VSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSARKKGS 147 (148)
Q Consensus 84 -----~-----~~~~~~~~~~~~~~~~~---~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g~~~g~ 147 (148)
. .+.|.++|..++....+ ..+..+.+ ...+...|++++.|+ +.|.+...+.|+.|.|+|+++++
T Consensus 79 ~~~~~~~~~~~~~~f~~~f~~~fgg~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~ 157 (371)
T PRK10767 79 GGGGFGGGGGFGDIFGDIFGDIFGGGRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGT 157 (371)
T ss_pred CCCCCCCccccccchhhhhhhhccCCccccCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCCCCCcccCCCC
Confidence 0 01245555544321000 11223444 356888999999998 77999999999999999998775
No 17
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.95 E-value=2.2e-28 Score=201.30 Aligned_cols=138 Identities=30% Similarity=0.430 Sum_probs=102.5
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHh----hcccccC
Q 032067 6 ACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDA----GLLSLLA 81 (148)
Q Consensus 6 ~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~----~~~~~~~ 81 (148)
.|||+||||+++|+.++||+|||+|+++||||+++.++ .|.++|++|++||++|+||.+|+.||+ .+..++.
T Consensus 9 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~----~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~ 84 (389)
T PRK14295 9 KDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDA----KAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFR 84 (389)
T ss_pred cCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCch----hHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccc
Confidence 59999999999999999999999999999999965443 688999999999999999999999998 4333221
Q ss_pred C----C--C------cH----------------HHHHHHHHHHHhhh-hcCCCCCch-HhHHHHHHHHHhccc-Cccccc
Q 032067 82 D----D--D------DE----------------EFCDFMQEMALMME-SVSPQEGYT-LEHLQGLLTDMIANE-QRIGFG 130 (148)
Q Consensus 82 ~----~--~------~~----------------~~~~~~~~~~~~~~-~~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~ 130 (148)
. . . .+ .|.++|..++.... ...+..+.+ ...+...|++++.|+ +.|.+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~g~di~~~l~lsLee~~~G~~k~i~~~ 164 (389)
T PRK14295 85 PGPGGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLT 164 (389)
T ss_pred cCCCCCCCCCCCcccccccccccccccccccccchhhhhcccccCCCCCCCCCCCCCEEEEEEEEHHHHhCCceEEEEee
Confidence 0 0 0 00 02222322211100 011223334 356788999999998 779999
Q ss_pred ccCCCCCCCCCCCCCCC
Q 032067 131 FADGCDSHFQSARKKGS 147 (148)
Q Consensus 131 ~~~~c~~c~g~g~~~g~ 147 (148)
+.+.|++|.|+|+++|+
T Consensus 165 r~~~C~~C~G~G~~~~~ 181 (389)
T PRK14295 165 SQAPCPACSGTGAKNGT 181 (389)
T ss_pred ccccCCCCcccccCCCC
Confidence 99999999999999875
No 18
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.95 E-value=3.5e-28 Score=199.47 Aligned_cols=137 Identities=30% Similarity=0.381 Sum_probs=105.0
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCC---
Q 032067 6 ACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLAD--- 82 (148)
Q Consensus 6 ~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~--- 82 (148)
.|||+||||+++|+.++||+|||+|+++||||+++ + ..|.++|++|++||++|+||.+|..||..+......
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~-~----~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~~~ 77 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-D----EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGG 77 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCC-c----HHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccccCC
Confidence 69999999999999999999999999999999964 2 268899999999999999999999999865431110
Q ss_pred --C-C-c-HHHHHHHHHHHHhhhhc-----CCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCCCCCCC
Q 032067 83 --D-D-D-EEFCDFMQEMALMMESV-----SPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSARKKGS 147 (148)
Q Consensus 83 --~-~-~-~~~~~~~~~~~~~~~~~-----~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g~~~g~ 147 (148)
. . . ..|.++|..+++..+.. .+..+.+ ...+...|++++.|+ +.+.+.....|++|.|+|+++|+
T Consensus 78 ~~g~~~~f~~~~d~f~~ffgg~g~~~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~ 154 (378)
T PRK14278 78 GGGFGGGFGGLGDVFEAFFGGGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDS 154 (378)
T ss_pred CCCCCcCcCchhHHHHHHhCCCCCCCCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCccCCCCC
Confidence 0 0 0 12445555554321100 1123334 356888999999998 77999999999999999999875
No 19
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.95 E-value=4.7e-28 Score=198.57 Aligned_cols=138 Identities=32% Similarity=0.439 Sum_probs=105.6
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCCC-
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLADD- 83 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~~- 83 (148)
..|||+||||+++|+.++||+|||+|+++||||+++ ++ .|.++|++|++||++|+||.+|+.||+.+..++...
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~-~~----~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~ 77 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINK-EE----GADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGF 77 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-Cc----cHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCc
Confidence 479999999999999999999999999999999964 22 578999999999999999999999999664432110
Q ss_pred --------C-c--HHHHHHHHHHHHhhhh----cCCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCCCCCC
Q 032067 84 --------D-D--EEFCDFMQEMALMMES----VSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSARKKG 146 (148)
Q Consensus 84 --------~-~--~~~~~~~~~~~~~~~~----~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g~~~g 146 (148)
+ . ..|.++|..++....+ ..+..+.+ ...+...|++++.|+ +.|.+.+.+.|+.|.|+|++++
T Consensus 78 ~~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~ 157 (376)
T PRK14280 78 GGGGFGGGDFGGGFGFEDIFSSFFGGGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPG 157 (376)
T ss_pred CCCCCCCCCccccccchhhHHHHhCCccccCcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCCCcccCCC
Confidence 0 0 0244555555431110 11223444 357888999999998 7799999999999999999877
Q ss_pred C
Q 032067 147 S 147 (148)
Q Consensus 147 ~ 147 (148)
+
T Consensus 158 ~ 158 (376)
T PRK14280 158 T 158 (376)
T ss_pred C
Confidence 5
No 20
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.95 E-value=4.9e-28 Score=198.08 Aligned_cols=140 Identities=29% Similarity=0.472 Sum_probs=104.0
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCC--
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLAD-- 82 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~-- 82 (148)
..|||+||||+++|+.+|||+|||+|+++||||+++.+ ...|.++|++|++||++|+||.+|+.||..+..+...
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~---~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~ 79 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPEN---RKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPY 79 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccc---hhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcccccccc
Confidence 47999999999999999999999999999999996432 2368899999999999999999999999865433210
Q ss_pred -----CC---cH---HH-----HHHHHHHHHhhhh-----cCCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCC
Q 032067 83 -----DD---DE---EF-----CDFMQEMALMMES-----VSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHF 139 (148)
Q Consensus 83 -----~~---~~---~~-----~~~~~~~~~~~~~-----~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~ 139 (148)
.. .+ .| .++|..++....+ ..+..+.+ ...+...|++++.|+ +.+.+.+.+.|+.|.
T Consensus 80 ~~~~~~g~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~~C~~C~ 159 (369)
T PRK14282 80 QETESGGGFFEDIFKDFENIFNRDIFDIFFGERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCG 159 (369)
T ss_pred ccCCCCCcccccccccccccccchhhhHhhcccCCcccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecccCCCCC
Confidence 00 00 11 1333333221100 11123334 356788999999998 779999999999999
Q ss_pred CCCCCCCC
Q 032067 140 QSARKKGS 147 (148)
Q Consensus 140 g~g~~~g~ 147 (148)
|+|+++++
T Consensus 160 G~G~~~~~ 167 (369)
T PRK14282 160 GTGVEPGS 167 (369)
T ss_pred ccCCCCCC
Confidence 99998875
No 21
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.94 E-value=6.3e-28 Score=198.72 Aligned_cols=138 Identities=31% Similarity=0.449 Sum_probs=102.9
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCC---
Q 032067 6 ACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLAD--- 82 (148)
Q Consensus 6 ~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~--- 82 (148)
.|||+||||+++|++++||+|||+|+++||||+++.++ .|.++|++|++||++|+||.+|+.||+.+..++..
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~----~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~ 76 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDA----EAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAG 76 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCch----HHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccC
Confidence 38999999999999999999999999999999975433 68899999999999999999999999865432200
Q ss_pred ---CCc-HH---------------H---HHHHHHHHHhhh----h----cCCCCCch-HhHHHHHHHHHhccc-Cccccc
Q 032067 83 ---DDD-EE---------------F---CDFMQEMALMME----S----VSPQEGYT-LEHLQGLLTDMIANE-QRIGFG 130 (148)
Q Consensus 83 ---~~~-~~---------------~---~~~~~~~~~~~~----~----~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~ 130 (148)
... .. | .++|..++..+. + ..+..+.+ ...+...|++++.|+ +.+.+.
T Consensus 77 ~~~~~g~~~~~~~~~~~~~~f~~~~~~~~d~f~~~fgg~g~~~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~ 156 (391)
T PRK14284 77 GFGGAGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVS 156 (391)
T ss_pred CcCCCCcCcccchhhhccccccccccccccchhhhccCccccccccccCCCcCCCCCeEEEEEEEHHHHhCCeeEEEEEe
Confidence 000 00 0 123333322110 0 11123334 356888999999998 779999
Q ss_pred ccCCCCCCCCCCCCCCC
Q 032067 131 FADGCDSHFQSARKKGS 147 (148)
Q Consensus 131 ~~~~c~~c~g~g~~~g~ 147 (148)
+...|++|.|+|+++++
T Consensus 157 r~~~C~~C~G~G~~~~~ 173 (391)
T PRK14284 157 GYKSCDACSGSGANSSQ 173 (391)
T ss_pred eeccCCCCcccccCCCC
Confidence 99999999999998875
No 22
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.94 E-value=1.7e-27 Score=196.48 Aligned_cols=139 Identities=29% Similarity=0.436 Sum_probs=104.5
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCC--
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLAD-- 82 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~-- 82 (148)
..|||+||||+++|+.++||+|||+|+++||||+++.++ .|.++|++|++||++|+||.+|+.||..+..++..
T Consensus 2 ~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~----~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~ 77 (397)
T PRK14281 2 KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNK----EAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSA 77 (397)
T ss_pred CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCch----HHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhcccc
Confidence 369999999999999999999999999999999965433 67899999999999999999999999865433210
Q ss_pred ---C------CcHHHHHHHHHHHHhhhhc-----------------C--------CCCCch-HhHHHHHHHHHhccc-Cc
Q 032067 83 ---D------DDEEFCDFMQEMALMMESV-----------------S--------PQEGYT-LEHLQGLLTDMIANE-QR 126 (148)
Q Consensus 83 ---~------~~~~~~~~~~~~~~~~~~~-----------------~--------~~~g~~-~~~~~~~f~~~~~g~-~~ 126 (148)
. ....|.++|..+..+|++. . +..+.+ ...+...|++++.|+ +.
T Consensus 78 ~~~~~~~~~~~~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~ 157 (397)
T PRK14281 78 ASGGGPGYGGGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKT 157 (397)
T ss_pred ccCCCCCCCcCCCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEE
Confidence 0 0112445544222222210 0 012333 356788999999998 77
Q ss_pred ccccccCCCCCCCCCCCCCCC
Q 032067 127 IGFGFADGCDSHFQSARKKGS 147 (148)
Q Consensus 127 ~~~~~~~~c~~c~g~g~~~g~ 147 (148)
|.+.+.+.|+.|.|+|+++++
T Consensus 158 i~~~r~~~C~~C~G~G~~~~~ 178 (397)
T PRK14281 158 LKIKKQVPCKECNGTGSKTGA 178 (397)
T ss_pred EEEEeeecCCCCCCcccCCCC
Confidence 999999999999999998763
No 23
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.94 E-value=1.8e-27 Score=195.49 Aligned_cols=138 Identities=28% Similarity=0.456 Sum_probs=103.9
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCCC-
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLADD- 83 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~~- 83 (148)
..|||+||||+++|+.++||+|||+|+++||||+++. + .+.++|++|++||++|+||.+|+.||..+..++...
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-~----~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~ 76 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-P----EAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSG 76 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-c----cHHHHHHHHHHHHHHhcCHHHHHHHhhhccccccccc
Confidence 4799999999999999999999999999999999642 2 678999999999999999999999998665432110
Q ss_pred ------------CcHHHHHHHHHHHHh------hhhc-----------CCCCCch-HhHHHHHHHHHhccc-Cccccccc
Q 032067 84 ------------DDEEFCDFMQEMALM------MESV-----------SPQEGYT-LEHLQGLLTDMIANE-QRIGFGFA 132 (148)
Q Consensus 84 ------------~~~~~~~~~~~~~~~------~~~~-----------~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~ 132 (148)
....+.++|..++.. ++.. .+..+.+ ...+...|++++.|+ +.+.+...
T Consensus 77 ~~~~~~~~~~~~~~~~~~d~f~~~f~~fg~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~ 156 (382)
T PRK14291 77 QQQQGQEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRY 156 (382)
T ss_pred CccccccccccccCCCHHHHHHHHHHhccccccccccccccccccccccccCCCCEEEEEEEEHHHhhCCEEEEEEEeee
Confidence 011233444444211 1110 0112333 356788899999998 77999999
Q ss_pred CCCCCCCCCCCCCCC
Q 032067 133 DGCDSHFQSARKKGS 147 (148)
Q Consensus 133 ~~c~~c~g~g~~~g~ 147 (148)
+.|+.|.|+|.++|+
T Consensus 157 ~~C~~C~G~G~~~~~ 171 (382)
T PRK14291 157 VPCEACGGTGYDPGS 171 (382)
T ss_pred ccCCCCccccCCCCC
Confidence 999999999998875
No 24
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.94 E-value=2.5e-27 Score=194.46 Aligned_cols=136 Identities=30% Similarity=0.448 Sum_probs=102.0
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCCC-
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLADD- 83 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~~- 83 (148)
..|||+||||+++|+.+|||+|||+|+++||||+++. ..|.++|++|++||++|+||.+|..||+.+..++...
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-----~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~~ 78 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-----EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFS 78 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-----ccHHHHHHHHHHHHHHhchhHHHHHHhhhccccccccc
Confidence 5799999999999999999999999999999999542 2688999999999999999999999998654332110
Q ss_pred --------C-cH-------HHHHHHHHHHHhhhh---cCCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCC
Q 032067 84 --------D-DE-------EFCDFMQEMALMMES---VSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSA 142 (148)
Q Consensus 84 --------~-~~-------~~~~~~~~~~~~~~~---~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g 142 (148)
. .+ .+.++|..+. |++ ..+..+.+ ..++...|++++.|+ +.+.+.....|++|.|+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~--fgg~~~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G 156 (378)
T PRK14283 79 QEDIFNNINFEDIFQGFGFGIGNIFDMFG--FGGGSRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSR 156 (378)
T ss_pred ccccccccCccccccccccchhhhccccc--cCCCCCCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCccc
Confidence 0 00 0112111110 111 11223444 357889999999998 679999999999999999
Q ss_pred CCCCC
Q 032067 143 RKKGS 147 (148)
Q Consensus 143 ~~~g~ 147 (148)
+++++
T Consensus 157 ~~~~~ 161 (378)
T PRK14283 157 AEPGS 161 (378)
T ss_pred cCCCC
Confidence 98765
No 25
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=5.5e-27 Score=186.07 Aligned_cols=75 Identities=51% Similarity=0.775 Sum_probs=70.2
Q ss_pred CCcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCC
Q 032067 4 TGACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLAD 82 (148)
Q Consensus 4 ~~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~ 82 (148)
.++|||+||||+++|+..|||+|||+||+++|||||+++| .|.+.|++|+.||+||+||++|+.||+.+.+++..
T Consensus 14 ~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp----~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~ 88 (336)
T KOG0713|consen 14 AGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDP----NANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKD 88 (336)
T ss_pred cCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCH----HHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcc
Confidence 5689999999999999999999999999999999999888 89999999999999999999999999988666553
No 26
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.94 E-value=8.6e-27 Score=189.77 Aligned_cols=136 Identities=33% Similarity=0.488 Sum_probs=103.5
Q ss_pred ccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCC----
Q 032067 7 CYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLAD---- 82 (148)
Q Consensus 7 d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~---- 82 (148)
|||+||||+++|+.++||+|||+|+++||||+++ . ..+.++|++|++||++|+||.+|..||..+..++..
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~----~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~ 75 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-D----KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGG 75 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-C----ccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcC
Confidence 7999999999999999999999999999999964 2 257899999999999999999999999865443211
Q ss_pred -CC---------cHHHHHHHHHHHHhhhh------cCCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCCCC
Q 032067 83 -DD---------DEEFCDFMQEMALMMES------VSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSARK 144 (148)
Q Consensus 83 -~~---------~~~~~~~~~~~~~~~~~------~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g~~ 144 (148)
.. -..+.++|..+++...+ ..+..+.+ ...+...|++++.|+ +.+.+.+.+.|++|.|+|++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~f~~~fg~~~g~~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~ 155 (354)
T TIGR02349 76 GGGGFNGFDIGFFGDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAK 155 (354)
T ss_pred CCCCcCCccccCcCchhhhHHHHhccCcccCccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCCCCCCCCCC
Confidence 00 01234555554432100 11223444 356788999999998 77999999999999999998
Q ss_pred CCC
Q 032067 145 KGS 147 (148)
Q Consensus 145 ~g~ 147 (148)
+++
T Consensus 156 ~~~ 158 (354)
T TIGR02349 156 PGT 158 (354)
T ss_pred CCC
Confidence 765
No 27
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.94 E-value=1e-26 Score=190.51 Aligned_cols=137 Identities=30% Similarity=0.478 Sum_probs=102.7
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCC---
Q 032067 6 ACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLAD--- 82 (148)
Q Consensus 6 ~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~--- 82 (148)
.|||+||||+++|+.+|||+|||+|+++||||+++ ++ .+.++|++|++||++|+||.+|..||..+..++..
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~-~~----~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~ 77 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTD-AK----DAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQS 77 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-Cc----CHHHHHHHHHHHHHHhhhHhHhhHHHhccccccccccc
Confidence 69999999999999999999999999999999964 22 57789999999999999999999999955432210
Q ss_pred ----C--C------cHHHHHHHHHHHHhhhhcCC----CCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCCCC
Q 032067 83 ----D--D------DEEFCDFMQEMALMMESVSP----QEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSARK 144 (148)
Q Consensus 83 ----~--~------~~~~~~~~~~~~~~~~~~~~----~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g~~ 144 (148)
. . .+.|.++|+.++.......+ ..+.+ ...+...|++++.|+ +.|.+...+.|..|.|+|++
T Consensus 78 ~~~~g~~~~~~~~~~~~f~~~f~~~~gg~~~~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~g~~ 157 (372)
T PRK14300 78 RGGGGNHGGFHPDINDIFGDFFSDFMGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSE 157 (372)
T ss_pred cCCCCCCCccccchhhhHHHHHHhhcCCCCCCCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCcccC
Confidence 0 0 12244444433211000111 13334 356788899999998 77999999999999999998
Q ss_pred CCC
Q 032067 145 KGS 147 (148)
Q Consensus 145 ~g~ 147 (148)
.|+
T Consensus 158 ~~~ 160 (372)
T PRK14300 158 KGE 160 (372)
T ss_pred CCC
Confidence 764
No 28
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.93 E-value=2.1e-26 Score=189.43 Aligned_cols=139 Identities=26% Similarity=0.319 Sum_probs=102.7
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCC--
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLAD-- 82 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~-- 82 (148)
..|||+||||+++|+.+|||+|||+|+++||||+++.++ ++.++|++|++||++|+||.+|+.||..+..++..
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~----~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~ 79 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDK----EAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAA 79 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCh----HHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCC
Confidence 579999999999999999999999999999999975443 68899999999999999999999999865433210
Q ss_pred ----CC--cHHHHHHHHHH---HHh-hhh---------c----CCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCC
Q 032067 83 ----DD--DEEFCDFMQEM---ALM-MES---------V----SPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDS 137 (148)
Q Consensus 83 ----~~--~~~~~~~~~~~---~~~-~~~---------~----~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~ 137 (148)
.. ..++.++|..+ +.. +++ . .+..+.+ ...+...|++++.|+ +.+.+...+.|..
T Consensus 80 ~~~~~~~~~~~~~~~f~~f~~~fg~~~gg~~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~ 159 (386)
T PRK14289 80 GGGGFSGEGMSMEDIFSMFGDIFGGHGGGFGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSH 159 (386)
T ss_pred CCCCCCCCCcChhhhhHHhhhhhcccccCcccccccccccccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCC
Confidence 00 11122332222 111 111 0 0112333 356788899999998 7799999999999
Q ss_pred CCCCCCCCCC
Q 032067 138 HFQSARKKGS 147 (148)
Q Consensus 138 c~g~g~~~g~ 147 (148)
|.|+|+.+++
T Consensus 160 C~G~G~~~~~ 169 (386)
T PRK14289 160 CHGTGAEGNN 169 (386)
T ss_pred CCCCCCCCCC
Confidence 9999988654
No 29
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.93 E-value=4.8e-26 Score=186.08 Aligned_cols=138 Identities=29% Similarity=0.430 Sum_probs=103.6
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCCC--
Q 032067 6 ACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLADD-- 83 (148)
Q Consensus 6 ~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~~-- 83 (148)
.|||+||||+++|+.+|||+|||+|++++|||+++. ....|.++|++|++||++|+||.+|..||..+..++...
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~---~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~~~ 79 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPG---NKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGS 79 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---chhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccCCC
Confidence 699999999999999999999999999999999543 233688999999999999999999999998654332100
Q ss_pred --C------cHHHHHHHHHHHHhh-h-----h--cCC-C--CCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCC
Q 032067 84 --D------DEEFCDFMQEMALMM-E-----S--VSP-Q--EGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSA 142 (148)
Q Consensus 84 --~------~~~~~~~~~~~~~~~-~-----~--~~~-~--~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g 142 (148)
. ..++.++|..++... . + ..+ . .+.+ ...+..+|++++.|+ +.+.+.....|+.|.|+|
T Consensus 80 ~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G~g 159 (365)
T PRK14290 80 NFNWDNFTHFSDINDIFNQIFGGNFGSDFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTG 159 (365)
T ss_pred CccccccccccchhHHHHHHhcCccccccccccccccCCCCCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCcccc
Confidence 0 012345555443321 0 0 001 0 1333 356888999999998 779999999999999999
Q ss_pred CCCC
Q 032067 143 RKKG 146 (148)
Q Consensus 143 ~~~g 146 (148)
.+++
T Consensus 160 ~~~~ 163 (365)
T PRK14290 160 AKNG 163 (365)
T ss_pred CCCC
Confidence 8765
No 30
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.93 E-value=6.2e-26 Score=185.95 Aligned_cols=138 Identities=30% Similarity=0.458 Sum_probs=104.0
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCCC-
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLADD- 83 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~~- 83 (148)
..|||+||||+++|+.++||+|||+|+++||||+++. + .+.++|++|++||++|+||.+|+.||..+..++...
T Consensus 2 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~-~----~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~~ 76 (374)
T PRK14293 2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE-P----GAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAA 76 (374)
T ss_pred CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-c----CHHHHHHHHHHHHHHHhchHHHHHHhhccccccccCC
Confidence 4699999999999999999999999999999999542 2 577899999999999999999999998665432110
Q ss_pred -----C-cHHHHHHHHHHHHhhhh-c---------CCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCCCCC
Q 032067 84 -----D-DEEFCDFMQEMALMMES-V---------SPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSARKK 145 (148)
Q Consensus 84 -----~-~~~~~~~~~~~~~~~~~-~---------~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g~~~ 145 (148)
. ...|.++|..++..+++ . .+..+.+ ...+...|++++.|+ +.+.+.+.+.|.+|.|+|.++
T Consensus 77 ~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~ 156 (374)
T PRK14293 77 GFPDMGDMGGFADIFETFFSGFGGAGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKP 156 (374)
T ss_pred CcCCcccccchHHHHHHHhcccCCCCCCCccccccCccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCCC
Confidence 0 11244555544432111 0 1112333 246788999999998 779999999999999999987
Q ss_pred CC
Q 032067 146 GS 147 (148)
Q Consensus 146 g~ 147 (148)
++
T Consensus 157 ~~ 158 (374)
T PRK14293 157 GT 158 (374)
T ss_pred CC
Confidence 65
No 31
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.93 E-value=5.2e-26 Score=186.22 Aligned_cols=137 Identities=34% Similarity=0.440 Sum_probs=103.3
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCC---
Q 032067 6 ACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLAD--- 82 (148)
Q Consensus 6 ~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~--- 82 (148)
.|||+||||+++|+.++||+|||+|++++|||+++ + ..+.++|++|++||++|+||.+|+.||..+..+...
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~-~----~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~ 76 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-E----KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPG 76 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-C----hhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccC
Confidence 58999999999999999999999999999999963 2 268899999999999999999999999966443100
Q ss_pred C---Cc--HHHHHHHHHHHHhhh--h----cCCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCCCCCCC
Q 032067 83 D---DD--EEFCDFMQEMALMME--S----VSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSARKKGS 147 (148)
Q Consensus 83 ~---~~--~~~~~~~~~~~~~~~--~----~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g~~~g~ 147 (148)
. .. .++.++|..++.... . ..+..+.+ ...+...|++++.|+ ..+.+.+.+.|+.|.|+|.+.++
T Consensus 77 ~~~~~~~~~d~~d~f~~~fg~~~~~~~~~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~ 154 (371)
T PRK14292 77 GDPFGGMGFDPMDIFEQLFGGAGFGGGRGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGG 154 (371)
T ss_pred CcccCccCCChHHHHHHhhCCCCcCCCCCcccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccCCCC
Confidence 0 00 112344544433210 0 11223334 356788999999998 77999999999999999998764
No 32
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=1.3e-24 Score=172.47 Aligned_cols=135 Identities=33% Similarity=0.530 Sum_probs=103.8
Q ss_pred CCcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCC-
Q 032067 4 TGACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLAD- 82 (148)
Q Consensus 4 ~~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~- 82 (148)
...|||+||||+++|+..|||+||++|++++|||.+... +|.++|++|.+||++|+|+++|..||..+......
T Consensus 41 ~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~-----~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~~~~ 115 (288)
T KOG0715|consen 41 SKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDK-----EASKKFKEISEAYEILSDEEKRQEYDVYGLEQHGEF 115 (288)
T ss_pred CCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCc-----chhhHHHHHHHHHHHhcCHHHHHHHHHhhhhccccc
Confidence 345999999999999999999999999999999985322 78999999999999999999999999977664111
Q ss_pred --CCcHHHHHHHHHHHHhhhhcCCCCCch-HhHHHHHHHHHhccc-CcccccccCCCCCCCCCCCCCCCC
Q 032067 83 --DDDEEFCDFMQEMALMMESVSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFADGCDSHFQSARKKGSC 148 (148)
Q Consensus 83 --~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~~~c~~c~g~g~~~g~~ 148 (148)
...+.+..++.. . +.... .+.+ ..++...|+++..|+ +.+.+.....|.+|+|+|...|.+
T Consensus 116 ~g~~~~~~~~~~~~--~-~~~~~--~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~~~~~~~ 180 (288)
T KOG0715|consen 116 GGNPFDVFLEFFGG--K-MNKRV--PDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGSGAEEGAK 180 (288)
T ss_pred cCCccchHHHhhcc--c-ccccc--cCcccccccccCHHHHhhccccceEEEeecccccccCcCcccccc
Confidence 112233333322 0 11111 1112 235788899999999 789999999999999999988864
No 33
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.87 E-value=2.4e-22 Score=159.88 Aligned_cols=68 Identities=47% Similarity=0.745 Sum_probs=62.1
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcc
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLL 77 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~ 77 (148)
..|||+||||+++|+.+|||+|||+|+++||||+++ ++ .+.++|++|++||++|+||.+|..||..+.
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~----~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~ 70 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SP----GAEEKFKEINEAYTVLSDPEKRRIYDTYGT 70 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-Ch----hHHHHHHHHHHHHHHhcCHHHHHHHHhcCC
Confidence 479999999999999999999999999999999963 22 678999999999999999999999998554
No 34
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.85 E-value=1.7e-21 Score=121.99 Aligned_cols=64 Identities=45% Similarity=0.782 Sum_probs=59.9
Q ss_pred ccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHH
Q 032067 7 CYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYD 73 (148)
Q Consensus 7 d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD 73 (148)
|||+||||+++++.++||++|+++++++|||+++.+. ..+.+.|..|++||++|++|.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~---~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDE---AEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTH---HHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhh---hhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 6899999999999999999999999999999975544 578999999999999999999999998
No 35
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.85 E-value=2.5e-21 Score=158.92 Aligned_cols=113 Identities=34% Similarity=0.479 Sum_probs=90.3
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCCCCc
Q 032067 6 ACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLADDDD 85 (148)
Q Consensus 6 ~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~~~~ 85 (148)
.+||.+|+|+++||.+|||+|||++++.+||||+. +|+.++.|++.|+.|.+||+||+||.+|++||..+..++...+.
T Consensus 9 ~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~-dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~t~gw 87 (546)
T KOG0718|consen 9 IELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHT-DPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLKTEGW 87 (546)
T ss_pred hhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccC-ChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhccccccCc
Confidence 48999999999999999999999999999999974 56677799999999999999999999999999987776663221
Q ss_pred -------------HHHHH--HHHHHHHhhhhcCCCCCch-HhHHHHHHHH
Q 032067 86 -------------EEFCD--FMQEMALMMESVSPQEGYT-LEHLQGLLTD 119 (148)
Q Consensus 86 -------------~~~~~--~~~~~~~~~~~~~~~~g~~-~~~~~~~f~~ 119 (148)
+.++. ...+...+++.+.|.+.+. ..++..+|..
T Consensus 88 El~~r~~tpeEIreE~Erl~r~~de~~l~qr~~P~g~i~i~v~~t~lF~~ 137 (546)
T KOG0718|consen 88 ELGFRGKTPEEIREEYERLQRERDERRLQQRVQPTGEITINVNATPLFAR 137 (546)
T ss_pred eeecCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEecchhhhcc
Confidence 12222 2334456788888887777 3566666654
No 36
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.84 E-value=2.4e-21 Score=155.12 Aligned_cols=123 Identities=26% Similarity=0.450 Sum_probs=87.4
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhccc----cc
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLS----LL 80 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~----~~ 80 (148)
..|||+||||+++|+.++||+|||+|++++|||+++ + ..+.++|++|++||++|+||.+|+.||..+.. .+
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~-~----~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~ 77 (306)
T PRK10266 3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-E----PDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQF 77 (306)
T ss_pred cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-C----ccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCccc
Confidence 369999999999999999999999999999999953 2 26889999999999999999999999985321 11
Q ss_pred C------C---CCcHHHHHHHHHHHHhhhh----cCCCCCch-HhHHHHHHHHHhccc-Cccccccc
Q 032067 81 A------D---DDDEEFCDFMQEMALMMES----VSPQEGYT-LEHLQGLLTDMIANE-QRIGFGFA 132 (148)
Q Consensus 81 ~------~---~~~~~~~~~~~~~~~~~~~----~~~~~g~~-~~~~~~~f~~~~~g~-~~~~~~~~ 132 (148)
. . ....+|.++|..++....+ ..+..+.+ ...+...|++++.|+ +.+.+...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~f~~~~g~~~~~~~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~ 144 (306)
T PRK10266 78 NRQFQHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLP 144 (306)
T ss_pred ccccccCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCCCCCceEEEEEEEHHHhcCCceEEEEEecc
Confidence 1 0 0112355555555432111 01112333 356788999999997 55665443
No 37
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.84 E-value=1.7e-20 Score=142.47 Aligned_cols=93 Identities=38% Similarity=0.546 Sum_probs=73.7
Q ss_pred CCcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCCC
Q 032067 4 TGACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLADD 83 (148)
Q Consensus 4 ~~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~~ 83 (148)
...|+|+||||.++|+..+|++|||+|++++|||+++ .....+++..|++|+.||+||+|.++|+.||..+... +.
T Consensus 12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~--eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~id--d~ 87 (264)
T KOG0719|consen 12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNH--EEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSID--DE 87 (264)
T ss_pred cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcch--hhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCC--Cc
Confidence 4569999999999999999999999999999999963 4445689999999999999999999999999866433 22
Q ss_pred CcHHHHHHHHHHHHhhh
Q 032067 84 DDEEFCDFMQEMALMME 100 (148)
Q Consensus 84 ~~~~~~~~~~~~~~~~~ 100 (148)
..+-+.+|..-|..++.
T Consensus 88 ~~d~~~~~~e~~~~iyk 104 (264)
T KOG0719|consen 88 SGDIDEDWLEFWRAIYK 104 (264)
T ss_pred cchhhhHHHHHHHHHHh
Confidence 33444444444444444
No 38
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=3.7e-21 Score=148.90 Aligned_cols=69 Identities=51% Similarity=0.777 Sum_probs=64.8
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcc
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLL 77 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~ 77 (148)
..|+|+||||+++|+.++|||+||+|++++|||+++.+| ++..+|++||.||+||+||.+|..||..+.
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P----~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~ 98 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNP----EATDKFKEINTAYAILSDPTKRNVYDEYGE 98 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCc----hhHHHHHHHHHHHHHhcChhhhhhHHHhhh
Confidence 357999999999999999999999999999999998887 889999999999999999999999999753
No 39
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=2.8e-20 Score=152.63 Aligned_cols=72 Identities=47% Similarity=0.810 Sum_probs=66.1
Q ss_pred CCCcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcc
Q 032067 3 DTGACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLL 77 (148)
Q Consensus 3 ~~~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~ 77 (148)
...++||+||||.++|+..+||++||+||++||||+ ||...++|+++|+.|+.||+|||||..|+-||....
T Consensus 5 ~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDk---npd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hre 76 (508)
T KOG0717|consen 5 FKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDK---NPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHRE 76 (508)
T ss_pred hhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCC---CCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHH
Confidence 345789999999999999999999999999999999 556667999999999999999999999999998654
No 40
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=2.2e-20 Score=148.06 Aligned_cols=74 Identities=43% Similarity=0.700 Sum_probs=68.9
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccCC
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLAD 82 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~~ 82 (148)
..|||.||||+.+|+..+|++|||+.+++||||||++|| .|.+.|+.|.+||+||+|+..|..||..+......
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP----~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~ 77 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDP----QAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSA 77 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh----HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccc
Confidence 569999999999999999999999999999999999888 69999999999999999999999999988766543
No 41
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.77 E-value=1e-18 Score=154.06 Aligned_cols=72 Identities=29% Similarity=0.508 Sum_probs=64.6
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccC
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLA 81 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~ 81 (148)
..+||+||||+++|+..+||+|||+||++||||+++.+ .|..+|+.|++||++|+||.+|+.||..+..+..
T Consensus 572 d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~-----~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~ 643 (1136)
T PTZ00341 572 DTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-----EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIK 643 (1136)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-----hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccC
Confidence 46999999999999999999999999999999996432 4778999999999999999999999997766544
No 42
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.77 E-value=7.7e-19 Score=108.27 Aligned_cols=59 Identities=53% Similarity=0.862 Sum_probs=53.6
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchH
Q 032067 6 ACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAA 67 (148)
Q Consensus 6 ~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~ 67 (148)
+|||+||||+++++.++||++|+++++++|||+++.. ...+.+.|++|++||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~---~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGD---KEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc---hHHHHHHHHHHHHHHHHHcCCC
Confidence 4899999999999999999999999999999996542 3478899999999999999985
No 43
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.75 E-value=3.2e-18 Score=103.63 Aligned_cols=55 Identities=56% Similarity=0.912 Sum_probs=50.5
Q ss_pred ccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccc
Q 032067 7 CYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSD 65 (148)
Q Consensus 7 d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd 65 (148)
|||+||||+++++.++||++||+|++++|||+++.. ..+.+.|.+|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~----~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD----PEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc----HHHHHHHHHHHHHHHHhcC
Confidence 699999999999999999999999999999996432 4789999999999999986
No 44
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.73 E-value=1.6e-17 Score=143.73 Aligned_cols=71 Identities=42% Similarity=0.600 Sum_probs=63.7
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccccC
Q 032067 6 ACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLLA 81 (148)
Q Consensus 6 ~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~~ 81 (148)
.|||+||||+++|+.++||+|||+|++++|||+++. ..+..+|++|++||++|+||.+|..||..+..+..
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-----~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~d 72 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-----PDAASIFAEINEANDVLSNPKKRANYDKYGHDGVD 72 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-----hhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccccc
Confidence 689999999999999999999999999999999643 26778999999999999999999999997665443
No 45
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.71 E-value=2e-17 Score=123.92 Aligned_cols=70 Identities=49% Similarity=0.771 Sum_probs=64.0
Q ss_pred CCCcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhh
Q 032067 3 DTGACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAG 75 (148)
Q Consensus 3 ~~~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~ 75 (148)
....+||+||||+++|+..+|++|||++++++|||+++.++. .+.+.|+.|++||++|+|+.+|..||..
T Consensus 3 ~~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~---~a~~~f~~i~~Ay~vLsd~~~r~~yd~~ 72 (237)
T COG2214 3 SDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPK---VAEEKFKEINEAYEILSDPERRAEYDKI 72 (237)
T ss_pred hhhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchh---HHHHHHHHHHHHHHHhhCHHHHHHhhhh
Confidence 445789999999999999999999999999999999766652 5899999999999999999999999974
No 46
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.71 E-value=2.6e-17 Score=121.92 Aligned_cols=72 Identities=24% Similarity=0.430 Sum_probs=62.6
Q ss_pred cccccccCcCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCc-hhhHHHHHHHHHHHHHHHccchHHHHHHHhhcc
Q 032067 6 ACYYSVLGLHKQ--ASASEIRDAYRKLALKWHPDRWMKDPT-AAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLL 77 (148)
Q Consensus 6 ~d~Y~iLgv~~~--a~~~eIk~ayr~l~~~~HPDk~~~~~~-~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~ 77 (148)
.|||+||||++. ++..+|+++||++++++|||++...+. .+..+.+.+..||+||++|+||.+|+.|+-.+.
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~l~ 75 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLSLH 75 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHHhc
Confidence 489999999996 688999999999999999999866443 334578899999999999999999999997554
No 47
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.70 E-value=3.2e-18 Score=137.44 Aligned_cols=74 Identities=43% Similarity=0.705 Sum_probs=67.5
Q ss_pred CCCcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcc
Q 032067 3 DTGACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLL 77 (148)
Q Consensus 3 ~~~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~ 77 (148)
...+|||+||||.++|+..||-||||+++.+||||.+. +..++..|+.+|..|..|-+||+||++|..||.+.+
T Consensus 391 s~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFq-dEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnGeD 464 (504)
T KOG0624|consen 391 SGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQ-DEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNGED 464 (504)
T ss_pred hccchHHHHhhhcccccHHHHHHHHHHHHHhcCCcccc-CHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCCCC
Confidence 35789999999999999999999999999999999874 555667899999999999999999999999998754
No 48
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.70 E-value=4.2e-17 Score=120.20 Aligned_cols=71 Identities=27% Similarity=0.403 Sum_probs=61.5
Q ss_pred cccccccCcCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcc
Q 032067 6 ACYYSVLGLHKQ--ASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLL 77 (148)
Q Consensus 6 ~d~Y~iLgv~~~--a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~ 77 (148)
.|||+||||++. ++..+|+++||++++++|||++.. +..+..+.+.+..||+||++|+||.+|+.|+-.+.
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~-~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l~ 74 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKT-LQEKEQNLIIASELNNAYSTLKDALKRAEYMLLLQ 74 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHcc
Confidence 589999999997 789999999999999999999753 33344566789999999999999999999987654
No 49
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.69 E-value=7.5e-17 Score=119.88 Aligned_cols=76 Identities=26% Similarity=0.355 Sum_probs=64.4
Q ss_pred CCCCcccccccCcCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCc-hhhHHHHHHHHHHHHHHHccchHHHHHHHhhcc
Q 032067 2 SDTGACYYSVLGLHKQ--ASASEIRDAYRKLALKWHPDRWMKDPT-AAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLL 77 (148)
Q Consensus 2 ~~~~~d~Y~iLgv~~~--a~~~eIk~ayr~l~~~~HPDk~~~~~~-~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~ 77 (148)
.+...|||+||||++. ++..+|+++||+|++++|||+++..+. ++..+.+.+..||+||++|+||.+|+.|.-.+.
T Consensus 2 ~~~~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l~ 80 (176)
T PRK03578 2 VSLKDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHLR 80 (176)
T ss_pred CCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHhc
Confidence 4566899999999996 689999999999999999999875443 233467778999999999999999999997543
No 50
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.69 E-value=8.4e-17 Score=119.24 Aligned_cols=74 Identities=27% Similarity=0.477 Sum_probs=64.9
Q ss_pred CCcccccccCcCCC--CCHHHHHHHHHHHHHHhCCCCCCCCCc-hhhHHHHHHHHHHHHHHHccchHHHHHHHhhcc
Q 032067 4 TGACYYSVLGLHKQ--ASASEIRDAYRKLALKWHPDRWMKDPT-AAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLL 77 (148)
Q Consensus 4 ~~~d~Y~iLgv~~~--a~~~eIk~ayr~l~~~~HPDk~~~~~~-~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~ 77 (148)
...|||++|||++. .+..+|+++||+|++++|||++...+. ++..+.+.+..||+||++|+||.+|+.|+-.+.
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l~ 78 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLALS 78 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 56899999999997 678999999999999999999876543 344578899999999999999999999997554
No 51
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.68 E-value=7.9e-17 Score=121.44 Aligned_cols=71 Identities=32% Similarity=0.492 Sum_probs=62.9
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccc
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSL 79 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~ 79 (148)
.-||||||||+++++..|||+|||+|++++||||++.. +..++.|..|++||+.|+|+..|+.|...+...
T Consensus 98 ~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~----~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PD 168 (230)
T KOG0721|consen 98 KFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPE----EGDEEFFEAIAKAYQALTDKKSRENWEKYGNPD 168 (230)
T ss_pred cCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCc----chhHHHHHHHHHHHHHhcchhhHHHHHHhCCCC
Confidence 46899999999999999999999999999999996432 367789999999999999999999999866443
No 52
>PHA03102 Small T antigen; Reviewed
Probab=99.68 E-value=5.8e-17 Score=117.58 Aligned_cols=66 Identities=23% Similarity=0.372 Sum_probs=58.9
Q ss_pred cccccccCcCCCC--CHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcccc
Q 032067 6 ACYYSVLGLHKQA--SASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSL 79 (148)
Q Consensus 6 ~d~Y~iLgv~~~a--~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~ 79 (148)
..+|+||||+++| |.++||+|||++++++|||+++ + .++|++|++||++|+++.+|..||..+...
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg-~-------~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~ 72 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGG-D-------EEKMKELNTLYKKFRESVKSLRDLDGEEDS 72 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCc-h-------hHHHHHHHHHHHHHhhHHHhccccccCCcc
Confidence 4589999999999 9999999999999999999942 2 368999999999999999999999876544
No 53
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.55 E-value=4.8e-15 Score=121.98 Aligned_cols=69 Identities=38% Similarity=0.585 Sum_probs=63.6
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhccc
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLS 78 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~ 78 (148)
.+|+|.+|||+++++.++||+.||++|...|||||. .| .|.+.|+.|+.||++|+|+.+|..||..+..
T Consensus 234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~-~~----~A~Eafk~Lq~Afevig~~~kR~eYd~e~~k 302 (490)
T KOG0720|consen 234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNM-IP----RAEEAFKKLQVAFEVIGDSVKRKEYDLELKK 302 (490)
T ss_pred CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccC-Ch----hHHHHHHHHHHHHHHhcchhhhhHHHHHHHH
Confidence 579999999999999999999999999999999974 33 8999999999999999999999999986543
No 54
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.54 E-value=1.9e-14 Score=106.66 Aligned_cols=72 Identities=17% Similarity=0.252 Sum_probs=64.0
Q ss_pred cccccccCcCCC--CCHHHHHHHHHHHHHHhCCCCCCCCC-chhhHHHHHHHHHHHHHHHccchHHHHHHHhhcc
Q 032067 6 ACYYSVLGLHKQ--ASASEIRDAYRKLALKWHPDRWMKDP-TAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLL 77 (148)
Q Consensus 6 ~d~Y~iLgv~~~--a~~~eIk~ayr~l~~~~HPDk~~~~~-~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~ 77 (148)
.|||++||||+. .+...++++||+|.+++|||++...+ .++..+.+....||+||.+|.||.+|+.|=-.+.
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L~ 76 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIALN 76 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHhc
Confidence 589999999997 89999999999999999999987643 3445688899999999999999999999987655
No 55
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.53 E-value=1.1e-14 Score=114.85 Aligned_cols=60 Identities=35% Similarity=0.579 Sum_probs=53.3
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCC---CCchhhHHHHHHHHHHHHHHHccc
Q 032067 6 ACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMK---DPTAAGEANRRFQQIQEAYSVLSD 65 (148)
Q Consensus 6 ~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~---~~~~~~~a~~~f~~i~~Ay~~Lsd 65 (148)
.++|+||||++++|.++||+|||+|++++|||++.. ++...+.++++|++|++||++|+.
T Consensus 200 ~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred HhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999753 233346799999999999999975
No 56
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.52 E-value=9.6e-15 Score=119.33 Aligned_cols=70 Identities=43% Similarity=0.722 Sum_probs=64.5
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcc
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLL 77 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~ 77 (148)
..|||.||||.+.++..+||+|||++++.+|||++..+ +.+++.+|++|-+||.+|+||.+|..||.+.+
T Consensus 372 Rkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~ags---q~eaE~kFkevgeAy~il~d~~kr~r~dsg~d 441 (486)
T KOG0550|consen 372 RKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGS---QKEAEAKFKEVGEAYTILSDPMKRVRFDSGQD 441 (486)
T ss_pred hhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcch---hHHHHHHHHHHHHHHHHhcCHHHHhhcccccc
Confidence 46899999999999999999999999999999996555 56899999999999999999999999998654
No 57
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=9.1e-15 Score=112.87 Aligned_cols=70 Identities=41% Similarity=0.617 Sum_probs=62.6
Q ss_pred CCCcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcc
Q 032067 3 DTGACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLL 77 (148)
Q Consensus 3 ~~~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~ 77 (148)
.+..|.|+||||+++++..+|.+|||+|++++|||++.+. ++.+.|..|..||++|.|...|..||-.+.
T Consensus 30 CG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~-----e~k~~F~~iAtayeilkd~e~rt~ydyald 99 (329)
T KOG0722|consen 30 CGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDP-----ESKKLFVKIATAYEILKDNETRTQYDYALD 99 (329)
T ss_pred ccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCc-----hhhhhhhhhhcccccccchhhHHhHHHHhc
Confidence 4668999999999999999999999999999999997433 455999999999999999999999997553
No 58
>PHA02624 large T antigen; Provisional
Probab=99.51 E-value=2.5e-14 Score=122.47 Aligned_cols=83 Identities=19% Similarity=0.317 Sum_probs=64.6
Q ss_pred CcccccccCcCCCC--CHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHH--Hhhccccc
Q 032067 5 GACYYSVLGLHKQA--SASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVY--DAGLLSLL 80 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a--~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~Y--D~~~~~~~ 80 (148)
..++|+||||+++| +.++||+|||++++++|||+. + +.++|++|+.||++|+++.+|..| |.+...+.
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKg-G-------deekfk~Ln~AYevL~d~~k~~r~~fd~~~~~~v 81 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKG-G-------DEEKMKRLNSLYKKLQEGVKSARQSFGTQDSSEI 81 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC-C-------cHHHHHHHHHHHHHHhcHHHhhhcccccccccCC
Confidence 35799999999999 999999999999999999994 1 247899999999999999999999 54311122
Q ss_pred CCCCcHHHHHHHHHH
Q 032067 81 ADDDDEEFCDFMQEM 95 (148)
Q Consensus 81 ~~~~~~~~~~~~~~~ 95 (148)
...+...|.+|+..+
T Consensus 82 ~~~~~~~w~~ww~~f 96 (647)
T PHA02624 82 PTYGTPEWEQWWEEF 96 (647)
T ss_pred CCCccccHHHHHHHh
Confidence 223445666655444
No 59
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.49 E-value=2.7e-14 Score=99.00 Aligned_cols=52 Identities=29% Similarity=0.391 Sum_probs=46.1
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHcc
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLS 64 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Ls 64 (148)
..++|+||||+++++.++||++||+|++++|||+. ++ ...+++|++||++|.
T Consensus 64 ~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkg-Gs-------~~~~~kIneAyevL~ 115 (116)
T PTZ00100 64 KSEAYKILNISPTASKERIREAHKQLMLRNHPDNG-GS-------TYIASKVNEAKDLLL 115 (116)
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCC-CC-------HHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999983 22 357889999999985
No 60
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.45 E-value=8.9e-14 Score=108.53 Aligned_cols=71 Identities=46% Similarity=0.747 Sum_probs=62.1
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhccc
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLS 78 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~ 78 (148)
..|||+||+|++.|+..+|++|||++++++|||+++.+ ...+..+|.+|.+||++|+|+.+|..||....+
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~---~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~ 72 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSP---KEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEE 72 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCc---hhhHHHHHhhhhccccccCCHHHhhhccccCcc
Confidence 46899999999999999999999999999999995333 334555899999999999999999999997653
No 61
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.35 E-value=1e-12 Score=108.40 Aligned_cols=73 Identities=29% Similarity=0.508 Sum_probs=65.6
Q ss_pred CCcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCC-CCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhc
Q 032067 4 TGACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMK-DPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGL 76 (148)
Q Consensus 4 ~~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~-~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~ 76 (148)
..-|+||||||+.+++..+||++||+|+.++||||.+. -+....+-++.+.+|++||..|+|...|+.|-..+
T Consensus 96 ~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yG 169 (610)
T COG5407 96 RGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYG 169 (610)
T ss_pred cCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcC
Confidence 45699999999999999999999999999999999765 33566788999999999999999999999998754
No 62
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=99.34 E-value=3.3e-12 Score=93.40 Aligned_cols=60 Identities=22% Similarity=0.373 Sum_probs=51.8
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCC-chhhHHHHHHHHHHHHHHHccchHHHHHHHhhcc
Q 032067 18 ASASEIRDAYRKLALKWHPDRWMKDP-TAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLL 77 (148)
Q Consensus 18 a~~~eIk~ayr~l~~~~HPDk~~~~~-~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~ 77 (148)
.+..+|+++||++++++|||+++..+ ..+..+.+.+..||+||++|+||.+|+.|+-.+.
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~ 63 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH 63 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 57889999999999999999976543 2344588899999999999999999999998764
No 63
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.27 E-value=8.1e-12 Score=93.53 Aligned_cols=66 Identities=26% Similarity=0.444 Sum_probs=58.4
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHH
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYD 73 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD 73 (148)
.-|+|+||.|.|..+.++||+.||+|++..|||+|+ ...+.|...|..|.+||.+|-|+..|..-+
T Consensus 52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~---Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~ 117 (250)
T KOG1150|consen 52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNP---DDAERAQKAFDIVKKAYKLLENDKIRKRCL 117 (250)
T ss_pred ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCc---ccHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 468999999999999999999999999999999954 445689999999999999999998666533
No 64
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=7.7e-10 Score=86.55 Aligned_cols=69 Identities=33% Similarity=0.460 Sum_probs=59.1
Q ss_pred cccccccCcCC---CCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhhc
Q 032067 6 ACYYSVLGLHK---QASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGL 76 (148)
Q Consensus 6 ~d~Y~iLgv~~---~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~ 76 (148)
.|+|.+|||+. .+++.+|.++.++.+.+||||+.... -.......|..|+.||++|+|+.+|..||.--
T Consensus 43 ~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~--g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~d 114 (379)
T COG5269 43 VDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAG--GNKGCDEFFKLIQKAREVLGDRKLRLQYDSND 114 (379)
T ss_pred hhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhcc--CCCCcHHHHHHHHHHHHHhccHHHHhhccccc
Confidence 58999999997 58999999999999999999996321 11156789999999999999999999999854
No 65
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.69 E-value=2.8e-08 Score=67.36 Aligned_cols=51 Identities=29% Similarity=0.430 Sum_probs=43.5
Q ss_pred cccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccch
Q 032067 8 YYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDA 66 (148)
Q Consensus 8 ~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~ 66 (148)
.-.||||+++++.+.||+|+|+++..+|||+ ++.| -.-.+||+|+++|...
T Consensus 58 A~lIL~v~~s~~k~KikeaHrriM~~NHPD~-GGSP-------YlAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 58 AALILGVTPSLDKDKIKEAHRRIMLANHPDR-GGSP-------YLASKINEAKDLLEGT 108 (112)
T ss_pred HHHHhCCCccccHHHHHHHHHHHHHcCCCcC-CCCH-------HHHHHHHHHHHHHhcc
Confidence 3469999999999999999999999999999 3455 4566899999999754
No 66
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.62 E-value=5.1e-08 Score=87.79 Aligned_cols=55 Identities=33% Similarity=0.588 Sum_probs=47.3
Q ss_pred CCCcccccccCcCCC----CCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHcc
Q 032067 3 DTGACYYSVLGLHKQ----ASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLS 64 (148)
Q Consensus 3 ~~~~d~Y~iLgv~~~----a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Ls 64 (148)
.+..+.|+||.|+-+ -.+++||++|++|+.+||||| || +-.++|.+||+||+.|+
T Consensus 1278 mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDK---NP----EGRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1278 MSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDK---NP----EGREMFERVNKAYELLS 1336 (2235)
T ss_pred cchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCC---Cc----hHHHHHHHHHHHHHHHH
Confidence 344578999999874 356899999999999999999 55 66799999999999998
No 67
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.53 E-value=1e-07 Score=73.37 Aligned_cols=54 Identities=37% Similarity=0.608 Sum_probs=46.3
Q ss_pred ccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHH-Hccc
Q 032067 7 CYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYS-VLSD 65 (148)
Q Consensus 7 d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~-~Lsd 65 (148)
.+|.||||..+|+.++++.||..|++++|||.-. .+...+.|.+|.+||. ||+.
T Consensus 48 e~fril~v~e~~~adevr~af~~lakq~hpdsgs-----~~adaa~f~qideafrkvlq~ 102 (342)
T KOG0568|consen 48 ECFRILGVEEGADADEVREAFHDLAKQVHPDSGS-----EEADAARFIQIDEAFRKVLQE 102 (342)
T ss_pred HHHHHhcccccCchhHHHHHHHHHHHHcCCCCCC-----ccccHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999731 1245688999999998 6654
No 68
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=98.07 E-value=6.1e-06 Score=59.77 Aligned_cols=74 Identities=20% Similarity=0.422 Sum_probs=58.3
Q ss_pred CCcccccccCcCC--CCCHHHHHHHHHHHHHHhCCCCCCCC-CchhhHHHHHHHHHHHHHHHccchHHHHHHHhhcc
Q 032067 4 TGACYYSVLGLHK--QASASEIRDAYRKLALKWHPDRWMKD-PTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAGLL 77 (148)
Q Consensus 4 ~~~d~Y~iLgv~~--~a~~~eIk~ayr~l~~~~HPDk~~~~-~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~ 77 (148)
...+||.++|... ...+..++.-|.-.++++|||+.... ......|.+...+|++||.+|.||-.|+.|=..+.
T Consensus 6 ~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilkl~ 82 (168)
T KOG3192|consen 6 SPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLKLK 82 (168)
T ss_pred hHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 3468999997766 45777788899999999999984321 11223688889999999999999999999987554
No 69
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=97.96 E-value=1.1e-05 Score=68.02 Aligned_cols=53 Identities=25% Similarity=0.424 Sum_probs=37.3
Q ss_pred cccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchh---hHHHHHHHHHHHHHHH
Q 032067 10 SVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAA---GEANRRFQQIQEAYSV 62 (148)
Q Consensus 10 ~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~---~~a~~~f~~i~~Ay~~ 62 (148)
+-+.+..-.++++||++||+.++.+||||.++.+... -.+++.|..+++||..
T Consensus 392 qpVsltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~ 447 (453)
T KOG0431|consen 392 QPVSLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNK 447 (453)
T ss_pred ccCchhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHh
Confidence 3445666689999999999999999999998765332 1344445555555543
No 70
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=97.65 E-value=2.8e-05 Score=57.67 Aligned_cols=58 Identities=33% Similarity=0.457 Sum_probs=49.3
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCC---CchhhHHHHHHHHHHHHHHHc
Q 032067 6 ACYYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKD---PTAAGEANRRFQQIQEAYSVL 63 (148)
Q Consensus 6 ~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~---~~~~~~a~~~f~~i~~Ay~~L 63 (148)
.+.|++|++...+...+|+++|+++....|||+.... +...+.+.+.+++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999999986542 223357899999999999754
No 71
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=97.56 E-value=7.8e-05 Score=55.32 Aligned_cols=74 Identities=27% Similarity=0.403 Sum_probs=59.1
Q ss_pred ccccccCcCCCC--CHHHHHHHHHHHHHHhCCCCCCCCCch-hhHHHHHHHHHHHHHHHccchHHHHHHHhhccccc
Q 032067 7 CYYSVLGLHKQA--SASEIRDAYRKLALKWHPDRWMKDPTA-AGEANRRFQQIQEAYSVLSDAAKRTVYDAGLLSLL 80 (148)
Q Consensus 7 d~Y~iLgv~~~a--~~~eIk~ayr~l~~~~HPDk~~~~~~~-~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~~~~~~ 80 (148)
+++.+++.++.+ ..+.++..|+.+.+.+|||+....+.. ...+.+.+..++.||.+|.+|..|..|=.....+.
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~~g~ 78 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALADGL 78 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhcccc
Confidence 566777777764 455699999999999999998664432 33577899999999999999999999988765443
No 72
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=96.70 E-value=0.0036 Score=44.22 Aligned_cols=54 Identities=19% Similarity=0.198 Sum_probs=38.6
Q ss_pred cccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHH
Q 032067 8 YYSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKR 69 (148)
Q Consensus 8 ~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R 69 (148)
-..||+|++..+.++|.+.|.+|-..++|++. ...-.-.+|..|.+.|....+.
T Consensus 60 A~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kG--------GSfYLQSKV~rAKErl~~El~~ 113 (127)
T PF03656_consen 60 ARQILNVKEELSREEIQKRYKHLFKANDPSKG--------GSFYLQSKVFRAKERLEQELKE 113 (127)
T ss_dssp HHHHHT--G--SHHHHHHHHHHHHHHT-CCCT--------S-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCccCHHHHHHHHHHHHhccCCCcC--------CCHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999973 2335556788888888755533
No 73
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=96.03 E-value=0.016 Score=40.04 Aligned_cols=52 Identities=17% Similarity=0.315 Sum_probs=43.6
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHH
Q 032067 17 QASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAK 68 (148)
Q Consensus 17 ~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~ 68 (148)
..+..+++.|.|.+-++.|||.+...|..+...++-++.|+.-.+.|..+..
T Consensus 5 ~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~~~ 56 (112)
T PF14687_consen 5 NLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKRKS 56 (112)
T ss_pred hhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhccCC
Confidence 4567789999999999999999999998877788888888888777776543
No 74
>PF13446 RPT: A repeated domain in UCH-protein
Probab=93.87 E-value=0.2 Score=30.59 Aligned_cols=27 Identities=19% Similarity=0.315 Sum_probs=24.7
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHH
Q 032067 6 ACYYSVLGLHKQASASEIRDAYRKLAL 32 (148)
Q Consensus 6 ~d~Y~iLgv~~~a~~~eIk~ayr~l~~ 32 (148)
.+.|++|||+++.+.+.|-.+|+....
T Consensus 5 ~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 5 EEAYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 467999999999999999999998887
No 75
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=92.56 E-value=0.31 Score=36.84 Aligned_cols=41 Identities=24% Similarity=0.336 Sum_probs=32.3
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchH
Q 032067 15 HKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAA 67 (148)
Q Consensus 15 ~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~ 67 (148)
+++|+.+||.+|+.++..+|--|. +...+|..||+.|.=..
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd~------------~~~~~IEaAYD~ILM~r 41 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGDE------------KSREAIEAAYDAILMER 41 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCH------------HHHHHHHHHHHHHHHHH
Confidence 478999999999999999995442 45667899998865443
No 76
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=88.02 E-value=0.5 Score=38.22 Aligned_cols=58 Identities=33% Similarity=0.424 Sum_probs=43.2
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhh
Q 032067 18 ASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAG 75 (148)
Q Consensus 18 a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~ 75 (148)
++..+|+.+|+..++..||++............+.+++|.+||.+|.+...|..+|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~ 61 (335)
T KOG0724|consen 4 ASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSW 61 (335)
T ss_pred ccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhh
Confidence 5778899999999999999984210011125677899999999999986666666654
No 77
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=79.35 E-value=8.3 Score=24.75 Aligned_cols=29 Identities=21% Similarity=0.255 Sum_probs=25.0
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHHh
Q 032067 6 ACYYSVLGLHKQASASEIRDAYRKLALKW 34 (148)
Q Consensus 6 ~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~ 34 (148)
+|.-+++++.|-|++.||+.|-++.++++
T Consensus 3 RNIk~LfnfdPPAT~~EvrdAAlQfVRKl 31 (88)
T COG5552 3 RNIKELFNFDPPATPVEVRDAALQFVRKL 31 (88)
T ss_pred cchHHHhCCCCCCCcHHHHHHHHHHHHHh
Confidence 35567899999999999999998888876
No 78
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=72.94 E-value=6.4 Score=27.74 Aligned_cols=52 Identities=15% Similarity=0.121 Sum_probs=37.6
Q ss_pred ccccCcCCCCCHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHH
Q 032067 9 YSVLGLHKQASASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAK 68 (148)
Q Consensus 9 Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~ 68 (148)
-.||+|.+..+.++|.+.|..|-..+.+.+- + ..-.-.+|-.|-+.|....+
T Consensus 62 ~qILnV~~~ln~eei~k~yehLFevNdkskG-G-------SFYLQSKVfRAkErld~El~ 113 (132)
T KOG3442|consen 62 QQILNVKEPLNREEIEKRYEHLFEVNDKSKG-G-------SFYLQSKVFRAKERLDEELK 113 (132)
T ss_pred hhHhCCCCCCCHHHHHHHHHHHHhccCcccC-c-------ceeehHHHHHHHHHHHHHHH
Confidence 4699999999999999999999999988763 1 12233456666666644333
No 79
>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length. The function of this family is unknown.
Probab=71.41 E-value=2.5 Score=32.98 Aligned_cols=19 Identities=11% Similarity=-0.038 Sum_probs=14.7
Q ss_pred ccccccCCCCCCCCCCCCC
Q 032067 127 IGFGFADGCDSHFQSARKK 145 (148)
Q Consensus 127 ~~~~~~~~c~~c~g~g~~~ 145 (148)
+.....+.|++|.|+|..+
T Consensus 33 ~~g~~~vtCPTCqGtGrIP 51 (238)
T PF07092_consen 33 FTGRDSVTCPTCQGTGRIP 51 (238)
T ss_pred ccCCCCCcCCCCcCCccCC
Confidence 3334567999999999876
No 80
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=69.92 E-value=16 Score=22.55 Aligned_cols=42 Identities=19% Similarity=0.290 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHh
Q 032067 24 RDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDA 74 (148)
Q Consensus 24 k~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~ 74 (148)
.+..|...+.-||+. ...+..+.|.+.|..|++.++...++.
T Consensus 13 ~~~~r~~~~~~~p~~---------~~~eisk~l~~~Wk~ls~~eK~~y~~~ 54 (72)
T cd01388 13 SKRHRRKVLQEYPLK---------ENRAISKILGDRWKALSNEEKQPYYEE 54 (72)
T ss_pred HHHHHHHHHHHCCCC---------CHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 345667777889985 345778899999999998776655554
No 81
>cd01390 HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III members include nucleolar and mitochondrial transcription factors, UBF and mtTF1, which bind four-way DNA junctions.
Probab=65.95 E-value=23 Score=20.87 Aligned_cols=41 Identities=20% Similarity=0.221 Sum_probs=29.1
Q ss_pred HHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHh
Q 032067 25 DAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDA 74 (148)
Q Consensus 25 ~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~ 74 (148)
+..|...+.-||+. ...+..+.|.+.|..|++..+....+.
T Consensus 13 ~~~r~~~~~~~p~~---------~~~~i~~~~~~~W~~ls~~eK~~y~~~ 53 (66)
T cd01390 13 QEQRPKLKKENPDA---------SVTEVTKILGEKWKELSEEEKKKYEEK 53 (66)
T ss_pred HHHHHHHHHHCcCC---------CHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 34566667778875 356888999999999986655554443
No 82
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=65.37 E-value=25 Score=20.54 Aligned_cols=42 Identities=14% Similarity=0.136 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHh
Q 032067 24 RDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDA 74 (148)
Q Consensus 24 k~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~ 74 (148)
.+.++...+.-||+. ...+....|...|..|++..+....+.
T Consensus 12 ~~~~~~~~~~~~~~~---------~~~~i~~~~~~~W~~l~~~~k~~y~~~ 53 (66)
T cd00084 12 SQEHRAEVKAENPGL---------SVGEISKILGEMWKSLSEEEKKKYEEK 53 (66)
T ss_pred HHHHHHHHHHHCcCC---------CHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 566777788889984 345788999999999987555544443
No 83
>cd01389 MATA_HMG-box MATA_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include the fungal mating type gene products MC, MATA1 and Ste11.
Probab=61.51 E-value=29 Score=21.60 Aligned_cols=42 Identities=14% Similarity=0.023 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHh
Q 032067 24 RDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDA 74 (148)
Q Consensus 24 k~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~ 74 (148)
.+.+|..++.-||+. ...+..+.|.+.|..|++.++....+.
T Consensus 13 ~~~~r~~~~~~~p~~---------~~~eisk~~g~~Wk~ls~eeK~~y~~~ 54 (77)
T cd01389 13 RQDKHAQLKTENPGL---------TNNEISRIIGRMWRSESPEVKAYYKEL 54 (77)
T ss_pred HHHHHHHHHHHCCCC---------CHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 567788888889986 345788899999999986665544443
No 84
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=60.80 E-value=42 Score=21.57 Aligned_cols=30 Identities=20% Similarity=0.119 Sum_probs=24.9
Q ss_pred ccccccCcCCCCCHHHHHHHHHHHHHHhCC
Q 032067 7 CYYSVLGLHKQASASEIRDAYRKLALKWHP 36 (148)
Q Consensus 7 d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HP 36 (148)
|--.+.|+.|-|+.+||+.|-.+.+++..=
T Consensus 4 nI~~L~~fePpaT~~EI~aAAlQyVRKvSG 33 (78)
T PF10041_consen 4 NIKTLRNFEPPATDEEIRAAALQYVRKVSG 33 (78)
T ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHHcc
Confidence 344567889999999999999999999853
No 85
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=58.97 E-value=14 Score=18.98 Aligned_cols=18 Identities=28% Similarity=0.514 Sum_probs=15.1
Q ss_pred CHHHHHHHHHHHHHHhCC
Q 032067 19 SASEIRDAYRKLALKWHP 36 (148)
Q Consensus 19 ~~~eIk~ayr~l~~~~HP 36 (148)
..++.|.+-|+.++.||-
T Consensus 9 ~~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 9 NKEDKRAQLRQAALEYHE 26 (28)
T ss_pred chHHHHHHHHHHHHHhcc
Confidence 347789999999999993
No 86
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=57.22 E-value=7.4 Score=16.59 Aligned_cols=13 Identities=38% Similarity=0.859 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHcc
Q 032067 52 RFQQIQEAYSVLS 64 (148)
Q Consensus 52 ~f~~i~~Ay~~Ls 64 (148)
.|..|..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 3566777777663
No 87
>PF00505 HMG_box: HMG (high mobility group) box; InterPro: IPR000910 High mobility group (HMG or HMGB) proteins are a family of relatively low molecular weight non-histone components in chromatin. HMG1 (also called HMG-T in fish) and HMG2 are two highly related proteins that bind single-stranded DNA preferentially and unwind double-stranded DNA. Although they have no sequence specificity, they have a high affinity for bent or distorted DNA, and bend linear DNA. HMG1 and HMG2 contain two DNA-binding HMG-box domains (A and B) that show structural and functional differences, and have a long acidic C-terminal domain rich in aspartic and glutamic acid residues. The acidic tail modulates the affinity of the tandem HMG boxes in HMG1 and 2 for a variety of DNA targets. HMG1 and 2 appear to play important architectural roles in the assembly of nucleoprotein complexes in a variety of biological processes, for example V(D)J recombination, the initiation of transcription, and DNA repair []. The profile in this entry describing the HMG-domains is much more general than the signature. In addition to the HMG1 and HMG2 proteins, HMG-domains occur in single or multiple copies in the following protein classes; the SOX family of transcription factors; SRY sex determining region Y protein and related proteins []; LEF1 lymphoid enhancer binding factor 1 []; SSRP recombination signal recognition protein; MTF1 mitochondrial transcription factor 1; UBF1/2 nucleolar transcription factors; Abf2 yeast ARS-binding factor []; and Saccharomyces cerevisiae transcription factors Ixr1, Rox1, Nhp6a, Nhp6b and Spp41.; GO: 0003677 DNA binding; PDB: 1I11_A 1J3C_A 1J3D_A 1WZ6_A 1WGF_A 2D7L_A 1GT0_D 3U2B_C 2CRJ_A 2CS1_A ....
Probab=53.19 E-value=38 Score=20.13 Aligned_cols=40 Identities=18% Similarity=0.199 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHH
Q 032067 24 RDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYD 73 (148)
Q Consensus 24 k~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD 73 (148)
.+.++...+.-||+. ...+..+.|.+.|.-|++.++ ..|-
T Consensus 12 ~~~~~~~~k~~~p~~---------~~~~i~~~~~~~W~~l~~~eK-~~y~ 51 (69)
T PF00505_consen 12 CKEKRAKLKEENPDL---------SNKEISKILAQMWKNLSEEEK-APYK 51 (69)
T ss_dssp HHHHHHHHHHHSTTS---------THHHHHHHHHHHHHCSHHHHH-HHHH
T ss_pred HHHHHHHHHHHhccc---------ccccchhhHHHHHhcCCHHHH-HHHH
Confidence 455666777789987 356788999999999975544 4444
No 88
>PF07739 TipAS: TipAS antibiotic-recognition domain; InterPro: IPR012925 TipAL is a bacterial transcriptional regulator of the MerR family. The tipA gene can be expressed as a long form, TipAL, and a short form, TipAS, which constitutes the C-terminal part of TipAL. TipAS forms the antibiotic-recognition domain []. This domain, which has an alpha-helical globin-like fold, is also found at the C terminus of other MerR family transcription factors, including Mta, a central regulator of multidrug resistance in Bacillus subtilis [], and SkgA from Caulobacter crescentus []. ; GO: 0003677 DNA binding, 0045892 negative regulation of transcription, DNA-dependent; PDB: 1NY9_A 3HH0_A 3QAO_A.
Probab=48.93 E-value=55 Score=21.67 Aligned_cols=50 Identities=16% Similarity=0.383 Sum_probs=27.1
Q ss_pred CcCCCC-CHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhh
Q 032067 13 GLHKQA-SASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAG 75 (148)
Q Consensus 13 gv~~~a-~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~ 75 (148)
|++|+. ...+|-+.++.++..+++. + .+.+..|.+.| +.||.-+..||..
T Consensus 51 g~~p~s~evq~l~~~~~~~~~~~~~~----~-------~~~~~~l~~~y--~~~~~~~~~~~~~ 101 (118)
T PF07739_consen 51 GVDPDSPEVQELAERWMELINQFTGG----D-------PELLRGLAQMY--VEDPRFAAMYDKK 101 (118)
T ss_dssp T--TT-HHHHHHHHHHHHHHHHSS--------------HHHHHHHHHHT--TSTHHHHHHHG-G
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHhCC----C-------HHHHHHHHHHH--HcCHHHHhhcccc
Confidence 445543 3334666667777666662 1 24666677766 6777777777743
No 89
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=44.72 E-value=13 Score=28.00 Aligned_cols=18 Identities=17% Similarity=0.126 Sum_probs=12.1
Q ss_pred ccccccCCCCCCCCCCCC
Q 032067 127 IGFGFADGCDSHFQSARK 144 (148)
Q Consensus 127 ~~~~~~~~c~~c~g~g~~ 144 (148)
..+.....|+.|.|+|..
T Consensus 110 ~~i~~~~~C~~C~G~G~v 127 (186)
T TIGR02642 110 LIQRRQRECDTCAGTGRF 127 (186)
T ss_pred EEecCCCCCCCCCCccEE
Confidence 333334779999998854
No 90
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=43.78 E-value=6.2 Score=24.56 Aligned_cols=30 Identities=23% Similarity=0.586 Sum_probs=20.8
Q ss_pred CcccccccCcCCCCCHHHH-HHHHHHHHHHhCCCC
Q 032067 5 GACYYSVLGLHKQASASEI-RDAYRKLALKWHPDR 38 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eI-k~ayr~l~~~~HPDk 38 (148)
.++++++||+++ +++ ......+....|||-
T Consensus 5 s~~~~~i~G~~~----~~~~~~~~~~~~~~ihpdD 35 (91)
T PF08447_consen 5 SDNFYEIFGYSP----EEIGKPDFEEWLERIHPDD 35 (91)
T ss_dssp -THHHHHHTS-H----HHHTCBEHHHHHHHB-TTT
T ss_pred eHHHHHHhCCCH----HHhccCCHHHHHhhcCHHH
Confidence 457899999855 566 666777888999983
No 91
>PF15178 TOM_sub5: Mitochondrial import receptor subunit TOM5 homolog
Probab=42.58 E-value=33 Score=19.95 Aligned_cols=22 Identities=18% Similarity=0.386 Sum_probs=18.1
Q ss_pred ccccCcCCCCCHHHHHHHHHHH
Q 032067 9 YSVLGLHKQASASEIRDAYRKL 30 (148)
Q Consensus 9 Y~iLgv~~~a~~~eIk~ayr~l 30 (148)
|.+=|+.|..+++|.|+.-|+-
T Consensus 2 ~~~egl~pk~DPeE~k~kmR~d 23 (51)
T PF15178_consen 2 FRIEGLGPKMDPEEMKRKMRED 23 (51)
T ss_pred cccccCCCCCCHHHHHHHHHHH
Confidence 5677899999999999887753
No 92
>smart00398 HMG high mobility group.
Probab=42.08 E-value=72 Score=18.69 Aligned_cols=42 Identities=17% Similarity=0.192 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHh
Q 032067 24 RDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDA 74 (148)
Q Consensus 24 k~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~ 74 (148)
....|...+.-||+. ...+..+.|...|..|++.++....+.
T Consensus 13 ~~~~r~~~~~~~~~~---------~~~~i~~~~~~~W~~l~~~ek~~y~~~ 54 (70)
T smart00398 13 SQENRAKIKAENPDL---------SNAEISKKLGERWKLLSEEEKAPYEEK 54 (70)
T ss_pred HHHHHHHHHHHCcCC---------CHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 344566666778875 245778889999999986555544443
No 93
>PF03206 NifW: Nitrogen fixation protein NifW; InterPro: IPR004893 Nitrogenase is a complex metalloenzyme composed of two proteins designated the Fe-protein and the MoFe-protein. Apart from these two proteins, a number of accessory proteins are essential for the maturation and assembly of nitrogenase. Even though experimental evidence suggests that these accessory proteins are required for nitrogenase activity, the exact roles played by many of these proteins in the functions of nitrogenase are unclear []. Using yeast two-hybrid screening it has been shown that NifW can interact with itself as well as NifZ. ; GO: 0009399 nitrogen fixation
Probab=40.64 E-value=83 Score=21.41 Aligned_cols=57 Identities=7% Similarity=0.115 Sum_probs=37.3
Q ss_pred CCcccccccCcCCCC-----CHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHc
Q 032067 4 TGACYYSVLGLHKQA-----SASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVL 63 (148)
Q Consensus 4 ~~~d~Y~iLgv~~~a-----~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~L 63 (148)
+..+|++.|||+-+. ..=-|-+.|.......++.. ...+.+.....-..+.+||+..
T Consensus 13 sAEdFf~fF~V~YDp~vv~V~RLHILkrF~~yL~~~~~~~---~~~e~~~~~~~R~~L~~AY~dF 74 (105)
T PF03206_consen 13 SAEDFFDFFGVPYDPKVVNVNRLHILKRFGQYLRAADFAP---GLSEEEDWAAYRRALERAYQDF 74 (105)
T ss_pred CHHHHHHHhCCCcchhHHHHhhHHHHHHHHHHHHhccCCC---CCCHHHHHHHHHHHHHHHHHHH
Confidence 456899999999864 44458888888888887641 1222234445555677777754
No 94
>COG3755 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=39.89 E-value=62 Score=22.85 Aligned_cols=42 Identities=24% Similarity=0.395 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHH
Q 032067 20 ASEIRDAYRKLALKWH-PDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVY 72 (148)
Q Consensus 20 ~~eIk~ayr~l~~~~H-PDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~Y 72 (148)
..++.+||+.+.+..| |++ ....++-+.||=...|-.--..+
T Consensus 50 Da~LN~AY~~ll~~l~~~~~-----------~~aL~kaQRAWi~fRDadC~~~~ 92 (127)
T COG3755 50 DAELNKAYKALLKRLQDSPR-----------TKALQKAQRAWIAFRDADCALIK 92 (127)
T ss_pred HHHHHHHHHHHHHHhccChH-----------HHHHHHHHHHHHHHhhHhHHHHh
Confidence 4579999999999998 654 12578888999888776555444
No 95
>cd01780 PLC_epsilon_RA Ubiquitin-like domain of Phosphatidylinositide-specific phospholipase. PLC_epsilon_RA Phosphatidylinositide-specific phospholipase C (PLC) is a signaling enzyme that hydrolyzes membrane phospholipids to generate inositol triphosphate. PLC-epsilon represents a novel forth class of PLC that has a PLC catalytic core domain, a CDC25 guanine nucleotide exchange factor domain and two RA (Ras-association) domains of which the second is critical for Ras activation of the enzyme.
Probab=39.08 E-value=39 Score=22.56 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=27.0
Q ss_pred CcccccccCcCCCCCHHHHHHHHHHHHHHhCCCC
Q 032067 5 GACYYSVLGLHKQASASEIRDAYRKLALKWHPDR 38 (148)
Q Consensus 5 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPDk 38 (148)
...+|.||-++...|..+|-+.--..|++.+||-
T Consensus 10 ~dqP~~il~a~~~STa~Dvi~Qal~KA~rs~~~~ 43 (93)
T cd01780 10 PDQPYAILRAPRVSTAQDVIQQTLCKARRSNPNP 43 (93)
T ss_pred CCCCeeEEEccccccHHHHHHHHHHHhccCCCCc
Confidence 4579999999999999887666666677778875
No 96
>COG0089 RplW Ribosomal protein L23 [Translation, ribosomal structure and biogenesis]
Probab=36.59 E-value=32 Score=23.00 Aligned_cols=21 Identities=29% Similarity=0.349 Sum_probs=17.5
Q ss_pred ccCcCCCCCHHHHHHHHHHHH
Q 032067 11 VLGLHKQASASEIRDAYRKLA 31 (148)
Q Consensus 11 iLgv~~~a~~~eIk~ayr~l~ 31 (148)
+|-|++.|+..+||+|...+-
T Consensus 25 vF~V~~~AtK~~IK~AvE~lF 45 (94)
T COG0089 25 VFIVDPDATKPEIKAAVEELF 45 (94)
T ss_pred EEEECCCCCHHHHHHHHHHHh
Confidence 567889999999999988763
No 97
>PRK14102 nifW nitrogenase stabilizing/protective protein; Provisional
Probab=36.40 E-value=1e+02 Score=21.00 Aligned_cols=58 Identities=16% Similarity=0.254 Sum_probs=34.4
Q ss_pred CCcccccccCcCCCC-----CHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHc
Q 032067 4 TGACYYSVLGLHKQA-----SASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVL 63 (148)
Q Consensus 4 ~~~d~Y~iLgv~~~a-----~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~L 63 (148)
+..+|++.|||+-+. +.=-|-|.|.....+.+.+. + ...+.+.....-..+.+||+..
T Consensus 13 sAEdFf~ff~v~YDp~vvnV~RLHILkrf~qyl~~~~~~~-~-~~~e~~~~~~yr~~L~~AY~dF 75 (105)
T PRK14102 13 DAEDYFQFFELPYDPTVVNVNRLHILKQFSQLIAEIDANF-P-DLSEEEKLEKYQLALEEAYQVF 75 (105)
T ss_pred cHHHHHHHhCCCCCcchhhHHHHHHHHHHHHHHHHhcccc-C-CCCHHHHHHHHHHHHHHHHHHH
Confidence 346899999999764 33347777777777655432 1 1122233444455667777653
No 98
>KOG0527 consensus HMG-box transcription factor [Transcription]
Probab=32.94 E-value=81 Score=25.93 Aligned_cols=42 Identities=19% Similarity=0.314 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHh
Q 032067 24 RDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDA 74 (148)
Q Consensus 24 k~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~ 74 (148)
.+..|+...+--||.+ | .++.+.|-+-|..|++.+||--+|.
T Consensus 74 Sq~~RRkma~qnP~mH--N-------SEISK~LG~~WK~Lse~EKrPFi~E 115 (331)
T KOG0527|consen 74 SQGQRRKLAKQNPKMH--N-------SEISKRLGAEWKLLSEEEKRPFVDE 115 (331)
T ss_pred hHHHHHHHHHhCcchh--h-------HHHHHHHHHHHhhcCHhhhccHHHH
Confidence 4567777777778873 3 4889999999999999999998886
No 99
>PRK14607 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional
Probab=32.88 E-value=3e+02 Score=23.99 Aligned_cols=37 Identities=19% Similarity=0.216 Sum_probs=17.7
Q ss_pred CCchHhHHHHHHHHHhcccCcccccccCCCCCCCCCCC
Q 032067 106 EGYTLEHLQGLLTDMIANEQRIGFGFADGCDSHFQSAR 143 (148)
Q Consensus 106 ~g~~~~~~~~~f~~~~~g~~~~~~~~~~~c~~c~g~g~ 143 (148)
.|.+.+++.....-+..-...+........|.| |+|+
T Consensus 240 kget~~El~g~~~a~~~~~~~~~~~~~~~~D~~-gtgg 276 (534)
T PRK14607 240 KGETADELAGFASVMREKSRHIPAPSPRTVDTC-GTGG 276 (534)
T ss_pred hCCCHHHHHHHHHHHHHhCCcCCCCCCCceEEc-cCCC
Confidence 455555665555444432233433222346666 5554
No 100
>KOG2344 consensus Exocyst component protein and related proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.14 E-value=3.7e+02 Score=24.13 Aligned_cols=75 Identities=17% Similarity=0.298 Sum_probs=43.7
Q ss_pred hhHHHHHHHHHHHHHHH---------ccchHHHHHHHhhcccccCCCCcHHHHHHHHHHHHhhhhcCCCCC--chHhHHH
Q 032067 46 AGEANRRFQQIQEAYSV---------LSDAAKRTVYDAGLLSLLADDDDEEFCDFMQEMALMMESVSPQEG--YTLEHLQ 114 (148)
Q Consensus 46 ~~~a~~~f~~i~~Ay~~---------Lsd~~~R~~YD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~ 114 (148)
.+.++++|+..|++++- +.||..|..-=....... -..+..|++.+.....+..+..- ++.++|+
T Consensus 530 ~~~~Kerfk~FN~~FeEv~k~Qs~wvV~D~~Lr~eLk~si~~~v----~P~Yr~F~~r~~~~~~~k~~~kyikYtpedlE 605 (623)
T KOG2344|consen 530 KEVLKERFKLFNEQFEEVYKKQSQWVVPDPKLREELKISISEKV----VPAYRSFYGRYRNSVSGKNPEKYIKYTPEDLE 605 (623)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCceecccHHHHHHHHHHHHHHH----HHHHHHHHHHhccccCCCCCCcccccCHHHHH
Confidence 45789999998888774 455555544333221111 23445555444332112223222 5689999
Q ss_pred HHHHHHhccc
Q 032067 115 GLLTDMIANE 124 (148)
Q Consensus 115 ~~f~~~~~g~ 124 (148)
..+.++|.|.
T Consensus 606 ~~L~dLF~g~ 615 (623)
T KOG2344|consen 606 NYLSDLFEGS 615 (623)
T ss_pred HHHHHHhCCC
Confidence 9999999994
No 101
>CHL00030 rpl23 ribosomal protein L23
Probab=30.98 E-value=46 Score=22.13 Aligned_cols=21 Identities=10% Similarity=0.184 Sum_probs=17.6
Q ss_pred ccCcCCCCCHHHHHHHHHHHH
Q 032067 11 VLGLHKQASASEIRDAYRKLA 31 (148)
Q Consensus 11 iLgv~~~a~~~eIk~ayr~l~ 31 (148)
++-|++.|+..|||+|..++-
T Consensus 23 ~F~V~~~anK~eIK~avE~lf 43 (93)
T CHL00030 23 TFDVDSGSTKTEIKHWIELFF 43 (93)
T ss_pred EEEECCCCCHHHHHHHHHHHh
Confidence 467899999999999997763
No 102
>KOG2320 consensus RAS effector RIN1 (contains VPS domain) [Intracellular trafficking, secretion, and vesicular transport]
Probab=29.84 E-value=41 Score=29.88 Aligned_cols=27 Identities=7% Similarity=0.382 Sum_probs=22.4
Q ss_pred cCcCCCCCHHHHHHHHHHHHHHhCCCC
Q 032067 12 LGLHKQASASEIRDAYRKLALKWHPDR 38 (148)
Q Consensus 12 Lgv~~~a~~~eIk~ayr~l~~~~HPDk 38 (148)
|-++..+.-++||.+++++.+.|||.+
T Consensus 395 ~~~Ps~~~mEqvk~k~~~m~r~YSP~k 421 (651)
T KOG2320|consen 395 LSTPSDVLMEQVKQKFTAMQRRYSPSK 421 (651)
T ss_pred ccCCcHHHHHHHHHHHHHHHHhhChHH
Confidence 445556778889999999999999976
No 103
>PF00076 RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); InterPro: IPR000504 Many eukaryotic proteins containing one or more copies of a putative RNA-binding domain of about 90 amino acids are known to bind single-stranded RNAs [, , ]. The largest group of single strand RNA-binding proteins is the eukaryotic RNA recognition motif (RRM) family that contains an eight amino acid RNP-1 consensus sequence [, ]. RRM proteins have a variety of RNA binding preferences and functions, and include heterogeneous nuclear ribonucleoproteins (hnRNPs), proteins implicated in regulation of alternative splicing (SR, U2AF, Sxl), protein components of small nuclear ribonucleoproteins (U1 and U2 snRNPs), and proteins that regulate RNA stability and translation (PABP, La, Hu) [, , ]. The RRM in heterodimeric splicing factor U2 snRNP auxiliary factor (U2AF) appears to have two RRM-like domains with specialised features for protein recognition []. The motif also appears in a few single stranded DNA binding proteins. The typical RRM consists of four anti-parallel beta-strands and two alpha-helices arranged in a beta-alpha-beta-beta-alpha-beta fold with side chains that stack with RNA bases. Specificity of RNA binding is determined by multiple contacts with surrounding amino acids. A third helix is present during RNA binding in some cases []. The RRM is reviewed in a number of publications [, , ].; GO: 0003676 nucleic acid binding; PDB: 2RNE_A 2DGO_A 2DO4_A 1YTY_B 2VOO_B 2VOP_A 2VON_B 1ZH5_B 2VOD_A 1S79_A ....
Probab=27.49 E-value=49 Score=19.13 Aligned_cols=24 Identities=21% Similarity=0.256 Sum_probs=19.3
Q ss_pred ccCcCCCCCHHHHHHHHHHHHHHh
Q 032067 11 VLGLHKQASASEIRDAYRKLALKW 34 (148)
Q Consensus 11 iLgv~~~a~~~eIk~ayr~l~~~~ 34 (148)
|=+||++++.++|++.+.+.....
T Consensus 3 v~nlp~~~t~~~l~~~f~~~g~i~ 26 (70)
T PF00076_consen 3 VGNLPPDVTEEELRDFFSQFGKIE 26 (70)
T ss_dssp EESETTTSSHHHHHHHHHTTSTEE
T ss_pred EcCCCCcCCHHHHHHHHHHhhhcc
Confidence 458899999999999998765543
No 104
>PRK10613 hypothetical protein; Provisional
Probab=26.97 E-value=25 Score=22.31 Aligned_cols=11 Identities=36% Similarity=0.830 Sum_probs=8.9
Q ss_pred CHHHHHHHHHH
Q 032067 19 SASEIRDAYRK 29 (148)
Q Consensus 19 ~~~eIk~ayr~ 29 (148)
+.++||.+||+
T Consensus 64 Tv~QIK~aYRq 74 (74)
T PRK10613 64 TVKQIKQAYRQ 74 (74)
T ss_pred HHHHHHHHhcC
Confidence 56789999984
No 105
>PF04719 TAFII28: hTAFII28-like protein conserved region; InterPro: IPR006809 The general transcription factor, TFIID, consists of the TATA-binding protein (TBP) associated with a series of TBP-associated factors (TAFs) that together participate in the assembly of the transcription preinitiation complex. The conserved region is found at the C terminus of most member proteins. The crystal structure of hTAFII28 with hTAFII18 shows that this region is involved in the binding of these two subunits. The conserved region contains four alpha helices and three loops arranged as in histone H3 [, ].; GO: 0006367 transcription initiation from RNA polymerase II promoter, 0005634 nucleus; PDB: 1BH9_B 1BH8_B.
Probab=26.94 E-value=53 Score=21.74 Aligned_cols=13 Identities=38% Similarity=0.820 Sum_probs=9.9
Q ss_pred CCHHHHHHHHHHH
Q 032067 18 ASASEIRDAYRKL 30 (148)
Q Consensus 18 a~~~eIk~ayr~l 30 (148)
..+..|++|||+|
T Consensus 78 l~P~hlreA~rrL 90 (90)
T PF04719_consen 78 LQPDHLREAYRRL 90 (90)
T ss_dssp --HHHHHHHHHHH
T ss_pred CCcHHHHHHHHhC
Confidence 4688899999987
No 106
>TIGR03636 L23_arch archaeal ribosomal protein L23. This model describes the archaeal ribosomal protein L23P and rigorously excludes the bacterial counterpart L23. In order to capture every known instance of archaeal L23P, the trusted cutoff is set lower than a few of the highest scoring eukaryotic cytosolic ribosomal counterparts.
Probab=26.40 E-value=63 Score=20.65 Aligned_cols=20 Identities=25% Similarity=0.431 Sum_probs=17.3
Q ss_pred ccCcCCCCCHHHHHHHHHHH
Q 032067 11 VLGLHKQASASEIRDAYRKL 30 (148)
Q Consensus 11 iLgv~~~a~~~eIk~ayr~l 30 (148)
++-|++.|+..|||+|..++
T Consensus 18 ~F~V~~~anK~eIK~avE~l 37 (77)
T TIGR03636 18 TFIVDRKATKGDIKRAVEKL 37 (77)
T ss_pred EEEECCCCCHHHHHHHHHHH
Confidence 45689999999999998876
No 107
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation. DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.
Probab=25.92 E-value=25 Score=21.47 Aligned_cols=17 Identities=12% Similarity=0.196 Sum_probs=9.5
Q ss_pred cccccCCCCCCCCCCCC
Q 032067 128 GFGFADGCDSHFQSARK 144 (148)
Q Consensus 128 ~~~~~~~c~~c~g~g~~ 144 (148)
.+.....|+.|.|+|-.
T Consensus 37 ~~~~~~~C~~C~G~G~~ 53 (66)
T PF00684_consen 37 VFQMQQTCPKCGGTGKI 53 (66)
T ss_dssp TEEEEEE-TTTSSSSEE
T ss_pred EEEEEEECCCCcceeeE
Confidence 34455567777777643
No 108
>COG2960 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.64 E-value=2.1e+02 Score=19.41 Aligned_cols=51 Identities=14% Similarity=0.168 Sum_probs=35.3
Q ss_pred HHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHhh
Q 032067 25 DAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDAG 75 (148)
Q Consensus 25 ~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~~ 75 (148)
+.+-.++.+.|-+.-+..+....+.+..|+.+-+++-.=.|-.+|+.||..
T Consensus 14 ~~~e~~~~ql~e~~a~~~~~~~~evE~~~r~~~q~~lnkLDlVsREEFdvq 64 (103)
T COG2960 14 NRFEDIAAQLSEDAAGAAQEVRAEVEKAFRAQLQRQLNKLDLVSREEFDVQ 64 (103)
T ss_pred HHHHHHHHHHHHHccccchhhHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 344555666666654334445567888888887777666789999999974
No 109
>PF10769 DUF2594: Protein of unknown function (DUF2594); InterPro: IPR019705 This entry represents proteins with unknown function and appear to be restricted to Enterobacteriaceae.
Probab=25.16 E-value=28 Score=22.07 Aligned_cols=11 Identities=36% Similarity=0.776 Sum_probs=8.9
Q ss_pred CHHHHHHHHHH
Q 032067 19 SASEIRDAYRK 29 (148)
Q Consensus 19 ~~~eIk~ayr~ 29 (148)
+..+||.+||+
T Consensus 64 Ti~QIK~aYRq 74 (74)
T PF10769_consen 64 TIKQIKTAYRQ 74 (74)
T ss_pred HHHHHHHHhcC
Confidence 66789999984
No 110
>PF04967 HTH_10: HTH DNA binding domain; InterPro: IPR007050 Numerous bacterial transcription regulatory proteins bind DNA via a helix-turn-helix (HTH) motif. This entry represents the HTH DNA binding domain found in Halobacterium salinarium (Halobacterium halobium) and described as a putative bacterio-opsin activator.
Probab=24.26 E-value=27 Score=20.73 Aligned_cols=20 Identities=40% Similarity=0.581 Sum_probs=10.4
Q ss_pred ccCcCCCCCHHHHHHHHHHH
Q 032067 11 VLGLHKQASASEIRDAYRKL 30 (148)
Q Consensus 11 iLgv~~~a~~~eIk~ayr~l 30 (148)
.|||++.+-.+-|++|-+++
T Consensus 32 ~lgis~st~~~~LRrae~kl 51 (53)
T PF04967_consen 32 ELGISKSTVSEHLRRAERKL 51 (53)
T ss_pred HhCCCHHHHHHHHHHHHHHH
Confidence 35555554444555555554
No 111
>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]
Probab=23.77 E-value=77 Score=29.51 Aligned_cols=33 Identities=12% Similarity=0.294 Sum_probs=20.8
Q ss_pred hHHHHHHHH----Hhccc--Cccccccc-CCCCCCCCCCC
Q 032067 111 EHLQGLLTD----MIANE--QRIGFGFA-DGCDSHFQSAR 143 (148)
Q Consensus 111 ~~~~~~f~~----~~~g~--~~~~~~~~-~~c~~c~g~g~ 143 (148)
.+|..+|.. -..|- ..|+|+.. ..|..|.|.|.
T Consensus 702 d~IR~lFA~tpeAK~rGyk~grFSFNvkGGRCe~C~GdG~ 741 (935)
T COG0178 702 DDIRELFAGTPEAKARGYKPGRFSFNVKGGRCEACQGDGV 741 (935)
T ss_pred HHHHHHHhcChHHHHcCCCcccccccCCCcCCccccCCce
Confidence 356666662 12233 45777777 66999988874
No 112
>PRK05738 rplW 50S ribosomal protein L23; Reviewed
Probab=23.43 E-value=75 Score=20.90 Aligned_cols=20 Identities=35% Similarity=0.479 Sum_probs=16.8
Q ss_pred ccCcCCCCCHHHHHHHHHHH
Q 032067 11 VLGLHKQASASEIRDAYRKL 30 (148)
Q Consensus 11 iLgv~~~a~~~eIk~ayr~l 30 (148)
++-|++.|+..|||+|..++
T Consensus 24 ~F~V~~~a~K~eIK~aie~l 43 (92)
T PRK05738 24 VFEVAPDATKPEIKAAVEKL 43 (92)
T ss_pred EEEECCCCCHHHHHHHHHHH
Confidence 45688999999999988876
No 113
>cd07356 HN_L-whirlin_R1_like First harmonin_N_like domain (repeat 1) of the long isoform of whirlin, and related domains. This subgroup contains the first of two harmonin_N_like domains of the long isoform of whirlin, and related domains. Whirlin is a postsynaptic density-95/discs-large/ZO-1 (PDZ) domain-containing scaffold protein which binds various components of the Usher protein network of the inner ear and the retina: erythrocyte protein p55, usherin, VlGR1, and myosin XVa. The long isoform of whirlin contains two harmonin_N_like domains, and three PDZ protein-binding domains, PDZ1-3. This first harmonin_N_like domain precedes PDZ1, and is a putative protein-binding module based on its sequence similarity to the N-terminal domain of harmonin. This first harmonin_N_like domain has been assayed for interaction with the cytoplasmic domain of cadherin 23 (a component of the Usher network and an interacting partner of the harmonin N-domain), however no interaction could be detected. Th
Probab=22.83 E-value=2.2e+02 Score=18.30 Aligned_cols=39 Identities=21% Similarity=0.323 Sum_probs=26.3
Q ss_pred HHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHccchHHHHHHHh
Q 032067 24 RDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVLSDAAKRTVYDA 74 (148)
Q Consensus 24 k~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd~~~R~~YD~ 74 (148)
++-|....-.||-+++ .+..+..---+|-+|++|.++--
T Consensus 21 r~~f~h~Ln~Y~~~Rn------------V~~Lv~sL~~vLd~P~Krqllpl 59 (78)
T cd07356 21 REEFIHCLNDYHAKRN------------VYDLVQSLKVVLDTPEKRQLLPL 59 (78)
T ss_pred HHHHHHHHHHHHhccc------------HHHHHHHHHHHhCCHhHhHHHHH
Confidence 4445555566777762 45556666678889999998763
No 114
>PF04949 Transcrip_act: Transcriptional activator; InterPro: IPR007033 Golgins are a family of coiled-coil proteins associated with the Golgi apparatus necessary for tethering events in membrane fusion and as structural supports for Golgi cisternae []. This entry represents proteins annotated as RAB6-interacting golgins.
Probab=22.56 E-value=1.3e+02 Score=21.95 Aligned_cols=25 Identities=32% Similarity=0.601 Sum_probs=21.4
Q ss_pred hHHHHHHHHHHHHHHHccchHHHHH
Q 032067 47 GEANRRFQQIQEAYSVLSDAAKRTV 71 (148)
Q Consensus 47 ~~a~~~f~~i~~Ay~~Lsd~~~R~~ 71 (148)
++.+..+..|.++.++|.||.++..
T Consensus 62 eEetkrLa~ireeLE~l~dP~RkEv 86 (159)
T PF04949_consen 62 EEETKRLAEIREELEVLADPMRKEV 86 (159)
T ss_pred HHHHHHHHHHHHHHHhhccchHHHH
Confidence 4677889999999999999988765
No 115
>PF12725 DUF3810: Protein of unknown function (DUF3810); InterPro: IPR024294 This family of bacterial proteins is functionally uncharacterised. Proteins in this family are typically between 333 and 377 amino acids in length and contain a conserved HEXXH sequence motif that is characteristic of metallopeptidases. This family may therefore belong to an as yet uncharacterised family of peptidase enzymes.
Probab=21.09 E-value=1.7e+02 Score=23.71 Aligned_cols=60 Identities=20% Similarity=0.200 Sum_probs=37.6
Q ss_pred CcccccccCcCC-CCCHHHHHHHHHHHHHHh-------CCCCCCCCCchhhHHHHHHHHHHHHHHHccc
Q 032067 5 GACYYSVLGLHK-QASASEIRDAYRKLALKW-------HPDRWMKDPTAAGEANRRFQQIQEAYSVLSD 65 (148)
Q Consensus 5 ~~d~Y~iLgv~~-~a~~~eIk~ayr~l~~~~-------HPDk~~~~~~~~~~a~~~f~~i~~Ay~~Lsd 65 (148)
...+++-||+.. ..+.+|+++-.+.++.+. ++|.... ......-.+.++++.+||+.|.+
T Consensus 81 R~pl~~~l~l~~~~~~~~eL~~l~~~li~~~N~l~~~i~~~~~~~-~~~~~~~~~i~~~~~~~y~~l~~ 148 (318)
T PF12725_consen 81 RPPLSERLGLETEEYSTEELKELTEYLIEKANELREQITEDDNGV-VDIPYDKEEIFEEAREGYENLAE 148 (318)
T ss_pred CcCHHHHcCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcccc-ccCCCCHHHHHHHHHHHHHHHHH
Confidence 455678899998 789999887777666544 3332111 00001235778888888888764
No 116
>TIGR00757 RNaseEG ribonuclease, Rne/Rng family. The C-terminal half of RNase E (excluded from the seed alignment for this model) lacks ribonuclease activity but participates in mRNA degradation by organizing the degradosome.
Probab=20.73 E-value=46 Score=28.13 Aligned_cols=13 Identities=8% Similarity=0.018 Sum_probs=10.3
Q ss_pred cCCCCCCCCCCCC
Q 032067 132 ADGCDSHFQSARK 144 (148)
Q Consensus 132 ~~~c~~c~g~g~~ 144 (148)
...|+.|.|+|.-
T Consensus 390 ~~~Cp~C~G~G~v 402 (414)
T TIGR00757 390 GTVCPHCSGTGIV 402 (414)
T ss_pred cCCCCCCcCeeEE
Confidence 3569999999953
No 117
>PF12057 DUF3538: Domain of unknown function (DUF3538); InterPro: IPR021925 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 120 amino acids in length. This domain is found associated with PF00240 from PFAM. This domain has a conserved SDL sequence motif.
Probab=20.68 E-value=85 Score=21.97 Aligned_cols=22 Identities=32% Similarity=0.392 Sum_probs=16.2
Q ss_pred chhhHHHHHHHHHHHHHHHccc
Q 032067 44 TAAGEANRRFQQIQEAYSVLSD 65 (148)
Q Consensus 44 ~~~~~a~~~f~~i~~Ay~~Lsd 65 (148)
.+.+++...+..|.+|+..|++
T Consensus 39 ~~re~~QRi~d~VsEalh~lsH 60 (120)
T PF12057_consen 39 QEREEDQRIFDLVSEALHYLSH 60 (120)
T ss_pred cchhhHhHHHHHHHHHHHHHHH
Confidence 4455777888888888887774
No 118
>PRK00810 nifW nitrogenase stabilizing/protective protein; Provisional
Probab=20.35 E-value=1.4e+02 Score=20.62 Aligned_cols=65 Identities=14% Similarity=0.175 Sum_probs=38.2
Q ss_pred CCcccccccCcCCCC-----CHHHHHHHHHHHHHHhCCCCCCCCCchhhHHHHHHHHHHHHHHHc--cchHHHHHH
Q 032067 4 TGACYYSVLGLHKQA-----SASEIRDAYRKLALKWHPDRWMKDPTAAGEANRRFQQIQEAYSVL--SDAAKRTVY 72 (148)
Q Consensus 4 ~~~d~Y~iLgv~~~a-----~~~eIk~ayr~l~~~~HPDk~~~~~~~~~~a~~~f~~i~~Ay~~L--sd~~~R~~Y 72 (148)
+..+|++.|||+-+. ..-.|-|.|......... .+. .+.......-..+.+||+.. |+|..-..+
T Consensus 17 sAEdff~ff~V~YDp~vvnV~RLHILKrF~~yL~~~~~---~~~-~e~~~~~~yr~aL~~AY~dF~~Stp~~ekvF 88 (113)
T PRK00810 17 SAEEFFQLLGVPYDPKVVNVARLHILKRMGQYLAQEDF---AGL-PEAEARARCRAVLERAYADFVASSPLDQRVF 88 (113)
T ss_pred cHHHHHHHhCCCCCHHHHHHhHHHHHHHHHHHHHhccc---CCC-CHHHHHHHHHHHHHHHHHHHccCCHhHHHHH
Confidence 346789999998753 444577777777665441 112 22223455566778888864 444444444
Done!