BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032072
(148 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3STY|A Chain A, Crystal Structure Of Tomato Methylketone Synthase I T18a
Mutant
pdb|3STY|B Chain B, Crystal Structure Of Tomato Methylketone Synthase I T18a
Mutant
Length = 267
Score = 121 bits (303), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 73/105 (69%)
Query: 18 KPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLM 77
K HFVLVH GAWCWYK+ LM +SG+ V+ ++L SG +P A I +F DY PLM
Sbjct: 12 KKHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLM 71
Query: 78 DFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122
+FM+SL NEK+ILVGH+ GGL+I++A F KI +AV+L+ M
Sbjct: 72 EFMASLPANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLM 116
>pdb|3STX|A Chain A, Crystal Structure Of Tomato Methylketone Synthase I H243a
Variant Complexed With Beta-Ketoheptanoate
pdb|3STX|B Chain B, Crystal Structure Of Tomato Methylketone Synthase I H243a
Variant Complexed With Beta-Ketoheptanoate
Length = 267
Score = 120 bits (301), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 73/105 (69%)
Query: 18 KPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLM 77
K HFVLVH GAWCWYK+ LM +SG+ V+ ++L SG +P A I +F DY PLM
Sbjct: 12 KKHFVLVHTAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLM 71
Query: 78 DFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122
+FM+SL NEK+ILVGH+ GGL+I++A F KI +AV+L+ M
Sbjct: 72 EFMASLPANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLM 116
>pdb|3STT|A Chain A, Crystal Structure Of Tomato Methylketone Synthase I Apo
Form
pdb|3STT|B Chain B, Crystal Structure Of Tomato Methylketone Synthase I Apo
Form
pdb|3STU|A Chain A, Crystal Structure Of Tomato Methylketone Synthase I
Complexed With Methyl-3-Hydroxydodecanoate
pdb|3STU|B Chain B, Crystal Structure Of Tomato Methylketone Synthase I
Complexed With Methyl-3-Hydroxydodecanoate
pdb|3STV|A Chain A, Crystal Structure Of Tomato Methylketone Synthase I
Complexed With 3- Hydroxyoctanoate
pdb|3STV|B Chain B, Crystal Structure Of Tomato Methylketone Synthase I
Complexed With 3- Hydroxyoctanoate
pdb|3STW|A Chain A, Crystal Structure Of Tomato Methylketone Synthase I
Complexed With 2- Tridecanone
pdb|3STW|B Chain B, Crystal Structure Of Tomato Methylketone Synthase I
Complexed With 2- Tridecanone
Length = 267
Score = 120 bits (301), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 73/105 (69%)
Query: 18 KPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLM 77
K HFVLVH GAWCWYK+ LM +SG+ V+ ++L SG +P A I +F DY PLM
Sbjct: 12 KKHFVLVHTAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLM 71
Query: 78 DFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122
+FM+SL NEK+ILVGH+ GGL+I++A F KI +AV+L+ M
Sbjct: 72 EFMASLPANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLM 116
>pdb|2WFL|B Chain B, Crystal Structure Of Polyneuridine Aldehyde Esterase
Length = 264
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 78/106 (73%)
Query: 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPL 76
Q+ HFVLVHG GAW WYK++ L+E++G+KV+ ++L +G +P + IH+F DY++PL
Sbjct: 9 QQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPL 68
Query: 77 MDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122
M+ M+S+ +EKV+L+GHS GG+S+ A + KI +AV+++A M
Sbjct: 69 MEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMM 114
>pdb|3GZJ|A Chain A, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|B Chain B, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|C Chain C, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|D Chain D, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|E Chain E, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
Length = 258
Score = 115 bits (287), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 78/106 (73%)
Query: 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPL 76
Q+ HFVLVHG GAW WYK++ L+E++G+KV+ ++L +G +P + IH+F DY++PL
Sbjct: 3 QQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPL 62
Query: 77 MDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122
M+ M+S+ +EKV+L+GHS GG+S+ A + KI +AV+++A M
Sbjct: 63 MEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMM 108
>pdb|2WFL|A Chain A, Crystal Structure Of Polyneuridine Aldehyde Esterase
Length = 264
Score = 115 bits (287), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 78/106 (73%)
Query: 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPL 76
Q+ HFVLVHG GAW WYK++ L+E++G+KV+ ++L +G +P + IH+F DY++PL
Sbjct: 9 QQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPL 68
Query: 77 MDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122
M+ M+S+ +EKV+L+GHS GG+S+ A + KI +AV+++A M
Sbjct: 69 MEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMM 114
>pdb|2WFM|A Chain A, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|B Chain B, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|C Chain C, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|D Chain D, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|E Chain E, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
Length = 264
Score = 115 bits (287), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 78/106 (73%)
Query: 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPL 76
Q+ HFVLVHG GAW WYK++ L+E++G+KV+ ++L +G +P + IH+F DY++PL
Sbjct: 9 QQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPL 68
Query: 77 MDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122
M+ M+S+ +EKV+L+GHS GG+S+ A + KI +AV+++A M
Sbjct: 69 MEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMM 114
>pdb|3DQZ|A Chain A, Structure Of The Hydroxynitrile Lyase From Arabidopsis
Thaliana
pdb|3DQZ|B Chain B, Structure Of The Hydroxynitrile Lyase From Arabidopsis
Thaliana
pdb|3DQZ|C Chain C, Structure Of The Hydroxynitrile Lyase From Arabidopsis
Thaliana
pdb|3DQZ|D Chain D, Structure Of The Hydroxynitrile Lyase From Arabidopsis
Thaliana
Length = 258
Score = 106 bits (264), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 74/106 (69%)
Query: 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPL 76
+K HFVLVH GAW WYK++ L+E++G++V+ + L SG DP ++ + D+Y+KPL
Sbjct: 3 RKHHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKPL 62
Query: 77 MDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122
++ + SL +NE+VILVG S GG++I A+ F KI++ V+L A +
Sbjct: 63 IETLKSLPENEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFL 108
>pdb|2G4L|A Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
Length = 257
Score = 105 bits (263), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 67/98 (68%)
Query: 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDF 79
HFVL+H I GAW W+K++ L+E G+KV+ ++L SG DP I SFD+Y++PL+ F
Sbjct: 5 HFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTF 64
Query: 80 MSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVY 117
+ +L EKVILVG S GGL+I A+ K+ KI AV+
Sbjct: 65 LEALPPGEKVILVGESCGGLNIAIAADKYXEKIAAAVF 102
>pdb|1YAS|A Chain A, Hydroxynitrile Lyase Complexed With Histidine
pdb|7YAS|A Chain A, Hydroxynitrile Lyase, Low Temperature Native Structure
pdb|2YAS|A Chain A, Hydroxynitrile Lyase From Hevea Brasiliensis Complexed
With Rhodanide
pdb|3YAS|A Chain A, Hydroxynitrile Lyase Complexed With Acetone
pdb|4YAS|A Chain A, Hydroxynitrile Lyase Complexed With Chloralhydrate
pdb|5YAS|A Chain A, Hydroxynitrile Lyase Complexed With Hexafluoroacetone
pdb|6YAS|A Chain A, Hydroxynitrile Lyase From Hevea Brasiliensis, Room
Temperature Structure
pdb|1QJ4|A Chain A, Hydroxynitrile-lyase From Hevea Brasiliensis At Atomic
Resolution
pdb|1SC9|A Chain A, Hydroxynitrile Lyase From Hevea Brasiliensis In Complex
With The Natural Substrate Acetone Cyanohydrin
pdb|3C6X|A Chain A, Hnl From Hevea Brasiliensis To Atomic Resolution
pdb|3C6Y|A Chain A, Hnl From Hevea Brasiliensis To Atomic Resolution
pdb|3C6Z|A Chain A, Hnl From Hevea Brasiliensis To Atomic Resolution
pdb|3C70|A Chain A, Hnl From Hevea Brasiliensis To Atomic Resolution
Length = 257
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 67/98 (68%)
Query: 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDF 79
HFVL+H I GAW W+K++ L+E G+KV+ ++L SG DP I SFD+Y++PL+ F
Sbjct: 5 HFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTF 64
Query: 80 MSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVY 117
+ +L EKVILVG S GGL+I A+ K+ KI AV+
Sbjct: 65 LEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVF 102
>pdb|1SCI|A Chain A, K236l Mutant Of Hydroxynitrile Lyase From Hevea
Brasiliensis
pdb|1SCK|A Chain A, K236l Mutant Of Hydroxynitrile Lyase From Hevea
Brasiliensis In Complex With Acetone
pdb|1SCQ|A Chain A, K236l Mutant Of Hydroxynitrile Lyase From Hevea
Brasiliensis In Complex With Acetonecyanohydrin
Length = 257
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 67/98 (68%)
Query: 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDF 79
HFVL+H I GAW W+K++ L+E G+KV+ ++L SG DP I SFD+Y++PL+ F
Sbjct: 5 HFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTF 64
Query: 80 MSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVY 117
+ +L EKVILVG S GGL+I A+ K+ KI AV+
Sbjct: 65 LEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVF 102
>pdb|1YB6|A Chain A, Hydroxynitrile Lyase From Hevea Brasiliensis In Complex
With Mandelonitrile
pdb|1YB7|A Chain A, Hydroxynitrile Lyase From Hevea Brasiliensis In Complex
With 2,3- Dimethyl-2-Hydroxy-Butyronitrile
Length = 256
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 67/98 (68%)
Query: 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDF 79
HFVL+H I GAW W+K++ L+E G+KV+ ++L SG DP I SFD+Y++PL+ F
Sbjct: 4 HFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTF 63
Query: 80 MSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVY 117
+ +L EKVILVG S GGL+I A+ K+ KI AV+
Sbjct: 64 LEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVF 101
>pdb|1DWQ|A Chain A, Crystal Structure Of Hydroxynitrile Lyase From Manihot
Esculenta In Complex With Substrates Acetone And
Chloroacetone:implications For The Mechanism Of
Cyanogenesis
pdb|1DWQ|B Chain B, Crystal Structure Of Hydroxynitrile Lyase From Manihot
Esculenta In Complex With Substrates Acetone And
Chloroacetone:implications For The Mechanism Of
Cyanogenesis
Length = 262
Score = 100 bits (248), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 66/98 (67%)
Query: 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDF 79
HFVL+H I GAW W+K++ +E +G+KV+ +++ SG DP I+SFD+Y++PL+ F
Sbjct: 9 HFVLIHTICHGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPLLTF 68
Query: 80 MSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVY 117
+ L EKVI+VG S GL+I A+ ++ +KI V+
Sbjct: 69 LEKLPQGEKVIIVGESXAGLNIAIAADRYVDKIAAGVF 106
>pdb|1EB8|A Chain A, Structure Determinants Of Substrate Specificity Of
Hydroxynitrile Lyase From Manihot Esculenta
pdb|1EB8|B Chain B, Structure Determinants Of Substrate Specificity Of
Hydroxynitrile Lyase From Manihot Esculenta
pdb|1EB9|A Chain A, Structure Determinants Of Substrate Specificity Of
Hydroxynitrile Lyase From Manihot Esculenta
pdb|1EB9|B Chain B, Structure Determinants Of Substrate Specificity Of
Hydroxynitrile Lyase From Manihot Esculenta
Length = 262
Score = 99.8 bits (247), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 66/98 (67%)
Query: 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDF 79
HFVL+H I GAW W+K++ +E +G+KV+ +++ SG DP I+SFD+Y++PL+ F
Sbjct: 9 HFVLIHTICHGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPLLTF 68
Query: 80 MSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVY 117
+ L EKVI+VG S GL+I A+ ++ +KI V+
Sbjct: 69 LEKLPQGEKVIIVGESCAGLNIAIAADRYVDKIAAGVF 106
>pdb|1DWO|A Chain A, Crystal Structure Of Hydroxynitrile Lyase From Manihot
Esculenta In Complex With Substrates Acetone And
Chloroacetone:implications For The Mechanism Of
Cyanogenesis
pdb|1DWO|B Chain B, Crystal Structure Of Hydroxynitrile Lyase From Manihot
Esculenta In Complex With Substrates Acetone And
Chloroacetone:implications For The Mechanism Of
Cyanogenesis
pdb|1DWP|A Chain A, Crystal Structure Of Hydroxynitrile Lyase From Manihot
Esculenta At 2.2 Angstrom Resolution
pdb|1DWP|B Chain B, Crystal Structure Of Hydroxynitrile Lyase From Manihot
Esculenta At 2.2 Angstrom Resolution
Length = 262
Score = 99.8 bits (247), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 66/98 (67%)
Query: 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDF 79
HFVL+H I GAW W+K++ +E +G+KV+ +++ SG DP I+SFD+Y++PL+ F
Sbjct: 9 HFVLIHTICHGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPLLTF 68
Query: 80 MSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVY 117
+ L EKVI+VG S GL+I A+ ++ +KI V+
Sbjct: 69 LEKLPQGEKVIIVGESCAGLNIAIAADRYVDKIAAGVF 106
>pdb|3RKS|A Chain A, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) K176p Mutant
pdb|3RKS|B Chain B, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) K176p Mutant
pdb|3RKS|C Chain C, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) K176p Mutant
pdb|3RKS|D Chain D, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) K176p Mutant
Length = 258
Score = 99.8 bits (247), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 66/98 (67%)
Query: 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDF 79
HFVL+H I GAW W+K++ +E +G+KV+ +++ SG DP I+SFD+Y++PL+ F
Sbjct: 5 HFVLIHTICHGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPLLTF 64
Query: 80 MSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVY 117
+ L EKVI+VG S GL+I A+ ++ +KI V+
Sbjct: 65 LEKLPQGEKVIIVGESCAGLNIAIAADRYVDKIAAGVF 102
>pdb|3RKT|A Chain A, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|B Chain B, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|C Chain C, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|D Chain D, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|E Chain E, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|F Chain F, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|G Chain G, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|H Chain H, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
Length = 258
Score = 99.8 bits (247), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 66/98 (67%)
Query: 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDF 79
HFVL+H I GAW W+K++ +E +G+KV+ +++ SG DP I+SFD+Y++PL+ F
Sbjct: 5 HFVLIHTICHGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPLLTF 64
Query: 80 MSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVY 117
+ L EKVI+VG S GL+I A+ ++ +KI V+
Sbjct: 65 LEKLPQGEKVIIVGESCAGLNIAIAADRYVDKIAAGVF 102
>pdb|1E89|A Chain A, On The Mechanism Of Cyanogenesis Catalyzed By
Hydroxynitrile Lyase From Manihot Esculenta. Crystal
Structure Of Active Site Mutant Ser80ala In Complex With
Acetone Cyanohydrin
pdb|1E89|B Chain B, On The Mechanism Of Cyanogenesis Catalyzed By
Hydroxynitrile Lyase From Manihot Esculenta. Crystal
Structure Of Active Site Mutant Ser80ala In Complex With
Acetone Cyanohydrin
pdb|1E8D|A Chain A, Mechanistic Aspects Of Cyanogenesis From Active Site
Mutant Ser80ala Of Hydroxynitrile Lyase From Manihot
Esculenta In Complex With Acetone Cyanohydrin
pdb|1E8D|B Chain B, Mechanistic Aspects Of Cyanogenesis From Active Site
Mutant Ser80ala Of Hydroxynitrile Lyase From Manihot
Esculenta In Complex With Acetone Cyanohydrin
Length = 262
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 66/98 (67%)
Query: 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDF 79
HFVL+H I GAW W+K++ +E +G+KV+ +++ SG DP I+SFD+Y++PL+ F
Sbjct: 9 HFVLIHTICHGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPLLTF 68
Query: 80 MSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVY 117
+ L EKVI+VG + GL+I A+ ++ +KI V+
Sbjct: 69 LEKLPQGEKVIIVGEACAGLNIAIAADRYVDKIAAGVF 106
>pdb|1Y7H|A Chain A, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|B Chain B, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|C Chain C, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|D Chain D, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|E Chain E, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|F Chain F, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|G Chain G, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|H Chain H, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7I|A Chain A, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7I|B Chain B, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
Length = 268
Score = 95.9 bits (237), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 4/133 (3%)
Query: 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDF 79
HFVLVHG G W WYK++ L+E +G+KV+ ++L SGTD + + DY PL +
Sbjct: 6 HFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLXEL 65
Query: 80 MSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAA----TMLKLGFCTDEDVKI 135
SL+ +EKVILVGHS GG ++ A K+ KI AV+LAA ++ F ++ +
Sbjct: 66 XESLSADEKVILVGHSLGGXNLGLAXEKYPQKIYAAVFLAAFXPDSVHNSSFVLEQYNER 125
Query: 136 RWRRNWHDCQLSP 148
NW D Q P
Sbjct: 126 TPAENWLDTQFLP 138
>pdb|1XKL|A Chain A, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
pdb|1XKL|B Chain B, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
pdb|1XKL|C Chain C, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
pdb|1XKL|D Chain D, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
Length = 273
Score = 95.5 bits (236), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 4/133 (3%)
Query: 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDF 79
HFVLVHG G W WYK++ L+E +G+KV+ ++L SGTD + + DY PL +
Sbjct: 6 HFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLXEL 65
Query: 80 MSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAA----TMLKLGFCTDEDVKI 135
SL+ +EKVILVGHS GG ++ A K+ KI AV+LAA ++ F ++ +
Sbjct: 66 XESLSADEKVILVGHSLGGXNLGLAXEKYPQKIYAAVFLAAFXPDSVHNSSFVLEQYNER 125
Query: 136 RWRRNWHDCQLSP 148
NW D Q P
Sbjct: 126 TPAENWLDTQFLP 138
>pdb|1R3D|A Chain A, Crystal Structure Of Protein Vc1974 From Vibrio Cholerae,
Pfam Abhydrolase
Length = 264
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 57/148 (38%), Gaps = 21/148 (14%)
Query: 6 NMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSD--- 62
N KP + P VLVHG+ G W V + + ++L G GT+P
Sbjct: 5 NQLHFAKPT-ARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCD 63
Query: 63 --ANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAA 120
A ++ + + +T VILVG+S GG I H + L
Sbjct: 64 NFAEAVEXIEQ------TVQAHVTSEVPVILVGYSLGGRLIX---HGLAQGAFSRLNLRG 114
Query: 121 TMLK---LGFCTDEDVKIRWRRNWHDCQ 145
+++ G +E+ RW+ HD Q
Sbjct: 115 AIIEGGHFGLQENEEKAARWQ---HDQQ 139
>pdb|1BRT|A Chain A, Bromoperoxidase A2 Mutant M99t
Length = 277
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Query: 22 VLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMS 81
VL+HG W + + ++GY+V + +G G S + + +D + L +
Sbjct: 27 VLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQS-SQPTTGYDYDTFAADLNTVLE 85
Query: 82 SLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLGFCTDED 132
+L D + +LVG S G + + +G V A++ TD++
Sbjct: 86 TL-DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDN 135
>pdb|1BRO|A Chain A, Bromoperoxidase A2
pdb|1BRO|B Chain B, Bromoperoxidase A2
Length = 277
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Query: 22 VLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMS 81
VL+HG W + + ++GY+V + +G G S + + +D + L +
Sbjct: 27 VLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQS-SQPTTGYDYDTFAADLNTVLE 85
Query: 82 SLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLGFCTDED 132
+L D + +LVG S G + + +G V A++ TD++
Sbjct: 86 TL-DLQDAVLVGFSMGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDN 135
>pdb|1A7U|A Chain A, Chloroperoxidase T
pdb|1A7U|B Chain B, Chloroperoxidase T
pdb|1A8U|A Chain A, Chloroperoxidase TBENZOATE COMPLEX
pdb|1A8U|B Chain B, Chloroperoxidase TBENZOATE COMPLEX
Length = 277
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Query: 22 VLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMS 81
VL+HG W + + ++GY+V + +G G S + + +D + L +
Sbjct: 27 VLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQS-SQPTTGYDYDTFAADLNTVLE 85
Query: 82 SLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLGFCTDED 132
+L D + +LVG S G + + +G V A++ TD++
Sbjct: 86 TL-DLQDAVLVGFSMGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDN 135
>pdb|1QGE|D Chain D, New Crystal Form Of Pseudomonas Glumae (Formerly
Chromobacterium Viscosum Atcc 6918) Lipase
Length = 222
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 22 VLVHGISGG------AWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKP 75
+LVHG++G WY ++ +++ G KV NL G +D Y K
Sbjct: 12 ILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLAYVKQ 71
Query: 76 LMDFMSSLTDNEKVILVGHSAGGLS 100
++ + T KV L+GHS GGL+
Sbjct: 72 VL----AATGATKVNLIGHSQGGLT 92
>pdb|1TAH|B Chain B, The Crystal Structure Of Triacylglycerol Lipase From
Pseudomonas Glumae Reveals A Partially Redundant
Catalytic Aspartate
pdb|1TAH|A Chain A, The Crystal Structure Of Triacylglycerol Lipase From
Pseudomonas Glumae Reveals A Partially Redundant
Catalytic Aspartate
pdb|1TAH|C Chain C, The Crystal Structure Of Triacylglycerol Lipase From
Pseudomonas Glumae Reveals A Partially Redundant
Catalytic Aspartate
pdb|1TAH|D Chain D, The Crystal Structure Of Triacylglycerol Lipase From
Pseudomonas Glumae Reveals A Partially Redundant
Catalytic Aspartate
Length = 318
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 22 VLVHGISGG------AWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKP 75
+LVHG++G WY ++ +++ G KV NL G +D Y K
Sbjct: 11 ILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLAYVKQ 70
Query: 76 LMDFMSSLTDNEKVILVGHSAGGLS 100
++ + T KV L+GHS GGL+
Sbjct: 71 VL----AATGATKVNLIGHSQGGLT 91
>pdb|2ES4|A Chain A, Crystal Structure Of The Burkholderia Glumae Lipase-
Specific Foldase In Complex With Its Cognate Lipase
pdb|2ES4|B Chain B, Crystal Structure Of The Burkholderia Glumae Lipase-
Specific Foldase In Complex With Its Cognate Lipase
pdb|1CVL|A Chain A, Crystal Structure Of Bacterial Lipase From Chromobacterium
Viscosum Atcc 6918
Length = 319
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 22 VLVHGISGG------AWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKP 75
+LVHG++G WY ++ +++ G KV NL G +D Y K
Sbjct: 12 ILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLAYVKQ 71
Query: 76 LMDFMSSLTDNEKVILVGHSAGGLS 100
++ + T KV L+GHS GGL+
Sbjct: 72 VL----AATGATKVNLIGHSQGGLT 92
>pdb|3VDX|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|3VDX|B Chain B, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|3VDX|C Chain C, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|B Chain B, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|C Chain C, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|D Chain D, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|E Chain E, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|F Chain F, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|G Chain G, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|H Chain H, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|I Chain I, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|J Chain J, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|K Chain K, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|L Chain L, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
Length = 456
Score = 35.8 bits (81), Expect = 0.008, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Query: 22 VLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMS 81
VL+HG W + + ++GY+V + +G G S + + +D + L +
Sbjct: 28 VLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQS-SQPTTGYDYDTFAADLNTVLE 86
Query: 82 SLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLGFCTDED 132
+L D + +LVG S G + + +G AV A++ TD++
Sbjct: 87 TL-DLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDN 136
>pdb|3V48|A Chain A, Crystal Structure Of The Putative AlphaBETA HYDROLASE RUTD
FROM E.Coli
pdb|3V48|B Chain B, Crystal Structure Of The Putative AlphaBETA HYDROLASE RUTD
FROM E.Coli
Length = 268
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 2/107 (1%)
Query: 10 IKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSF 69
+ P P VL+ G+ G W ++E Y+V C + +G+G +P +S
Sbjct: 7 LSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQE-YQVVCYDQRGTGNNPDTLAEDYSI 65
Query: 70 DDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAV 116
L + + E +VGH+ G L Q + + + + +
Sbjct: 66 AQXAAELHQALVA-AGIEHYAVVGHALGALVGXQLALDYPASVTVLI 111
>pdb|3D59|A Chain A, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase
pdb|3D59|B Chain B, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase
pdb|3D5E|A Chain A, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By Paraoxon
pdb|3D5E|B Chain B, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By Paraoxon
pdb|3F97|A Chain A, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By Soman
pdb|3F97|B Chain B, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By Soman
pdb|3F98|A Chain A, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By Tabun
pdb|3F98|B Chain B, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By Tabun
pdb|3F98|C Chain C, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By Tabun
pdb|3F9C|A Chain A, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By
Diisopropylfluorophosphate
pdb|3F9C|B Chain B, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By
Diisopropylfluorophosphate
Length = 383
Score = 34.3 bits (77), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 10/106 (9%)
Query: 30 GAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPL---------MDFM 80
G W +R L + + ++ + S A S+ D+ KP+ M+ +
Sbjct: 153 GDKSWLYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQL 212
Query: 81 SSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLG 126
D EK+ ++GHS GG ++ Q + + R + L A M LG
Sbjct: 213 KDSIDREKIAVIGHSFGGATVIQTLSE-DQRFRCGIALDAWMFPLG 257
>pdb|2CJP|A Chain A, Structure Of Potato (Solanum Tuberosum) Epoxide Hydrolase
I (Steh1)
pdb|2CJP|B Chain B, Structure Of Potato (Solanum Tuberosum) Epoxide Hydrolase
I (Steh1)
Length = 328
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 12/91 (13%)
Query: 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSG-------TDPSDANSIHSF 69
+ P + +HG + W + GY+ +L+G G DPS + +H
Sbjct: 30 EGPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHLV 89
Query: 70 DDYNKPLMDFMSSLTDN-EKVILVGHSAGGL 99
D ++ + ++ N EKV +V H G L
Sbjct: 90 GD----VVALLEAIAPNEEKVFVVAHDWGAL 116
>pdb|3CXU|A Chain A, Structure Of A Y149f Mutant Of Epoxide Hydrolase From
Solanum Tuberosum
pdb|3CXU|B Chain B, Structure Of A Y149f Mutant Of Epoxide Hydrolase From
Solanum Tuberosum
Length = 328
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 12/91 (13%)
Query: 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSG-------TDPSDANSIHSF 69
+ P + +HG + W + GY+ +L+G G DPS + +H
Sbjct: 30 EGPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHLV 89
Query: 70 DDYNKPLMDFMSSLTDN-EKVILVGHSAGGL 99
D ++ + ++ N EKV +V H G L
Sbjct: 90 GD----VVALLEAIAPNEEKVFVVAHDWGAL 116
>pdb|1OIL|A Chain A, Structure Of Lipase
pdb|1OIL|B Chain B, Structure Of Lipase
pdb|4LIP|D Chain D, Pseudomonas Lipase Complexed With Rc-(rp, Sp)-
Dibutylcarbamoylglycero-3-o-butylphosphonate
pdb|4LIP|E Chain E, Pseudomonas Lipase Complexed With Rc-(rp, Sp)-
Dibutylcarbamoylglycero-3-o-butylphosphonate
pdb|1HQD|A Chain A, Pseudomonas Cepacia Lipase Complexed With Transition State
Analogue Of 1-Phenoxy-2-Acetoxy Butane
pdb|2LIP|A Chain A, Pseudomonas Lipase Open Conformation
pdb|3LIP|A Chain A, Open Conformation Of Pseudomonas Cepacia Lipase
pdb|5LIP|A Chain A, Pseudomonas Lipase Complexed With Rc-(Rp, Sp)-1,2-
Dioctylcarbamoylglycero-3-O-Octylphosphonate
pdb|2NW6|A Chain A, Burkholderia Cepacia Lipase Complexed With S-Inhibitor
Length = 320
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 21 FVLVHGISG-----GAW-CWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNK 74
+LVHG++G G WY ++ ++ G V NL G +D Y K
Sbjct: 11 IILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPNGRGEQLLAYVK 70
Query: 75 PLMDFMSSLTDNEKVILVGHSAGGLS 100
++ + T KV LVGHS GGL+
Sbjct: 71 TVL----AATGATKVNLVGHSQGGLT 92
>pdb|1CQZ|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase.
pdb|1CQZ|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase.
pdb|1CR6|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cpu Inhibitor
pdb|1CR6|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cpu Inhibitor
pdb|1EK1|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Ciu Inhibitor
pdb|1EK1|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Ciu Inhibitor
pdb|1EK2|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cdu Inhibitor
pdb|1EK2|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cdu Inhibitor
Length = 554
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Query: 19 PHFVLVHGISGGAWCW-YKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYN---- 73
P L HG + W Y++ L + +G++V I++KG G D++S ++Y
Sbjct: 257 PALCLCHGFPESWFSWRYQIPALAQ-AGFRVLAIDMKGYG----DSSSPPEIEEYAMELL 311
Query: 74 -KPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYL 118
K ++ F+ L + V +GH G+ + + + ++R L
Sbjct: 312 CKEMVTFLDKLGIPQAV-FIGHDWAGVMVWNMALFYPERVRAVASL 356
>pdb|1YS1|X Chain X, Burkholderia Cepacia Lipase Complexed With Hexylphosphonic
Acid (R)-2-Methyl-3-Phenylpropyl Ester
pdb|1YS2|X Chain X, Burkholderia Cepacia Lipase Complexed With Hexylphosphonic
Acid (s) 2-methyl-3-phenylpropyl Ester
Length = 320
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 21 FVLVHGISG-----GAW-CWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNK 74
+LVHG++G G WY ++ ++ G V NL G +D Y K
Sbjct: 11 IILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPNGRGEQLLAYVK 70
Query: 75 PLMDFMSSLTDNEKVILVGHSAGGLS 100
++ + T KV LVGHS GGL+
Sbjct: 71 TVL----AATGATKVNLVGHSQGGLT 92
>pdb|3QIT|A Chain A, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|B Chain B, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|C Chain C, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|D Chain D, Thioesterase Domain From Curacin Biosynthetic Pathway
Length = 286
Score = 33.5 bits (75), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYN-KP 75
+ P + +HGI W +V + GY+V +L G G S + S+
Sbjct: 25 EHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRS-SHLEMVTSYSSLTFLA 83
Query: 76 LMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIR 113
+D + ++ ++LVGHS G + T + KI+
Sbjct: 84 QIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIK 121
>pdb|3ANS|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANS|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
Length = 336
Score = 33.1 bits (74), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 19 PHFVLVHGISGGAWCW-YKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSF--DDYNKP 75
P L HG + W Y++ L + +GY+V +++KG G + S I + + K
Sbjct: 40 PAVCLCHGFPESWYSWRYQIPALAQ-AGYRVLAMDMKGYG-ESSAPPEIEEYCMEVLCKE 97
Query: 76 LMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATML 123
++ F+ L ++ V +GH GG+ + + + ++R L +
Sbjct: 98 MVTFLDKLGLSQAV-FIGHDWGGMLVWYMALFYPERVRAVASLNTPFI 144
>pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase
pdb|1VJ5|A Chain A, Human Soluble Epoxide Hydrolase- N-Cyclohexyl-N'-(4-
Iodophenyl)urea Complex
pdb|1ZD2|P Chain P, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Ethanoic Acid Complex
pdb|1ZD3|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Butyric Acid Complex
pdb|1ZD4|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Hexanoic Acid Complex
pdb|1ZD5|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Heptanoic Acid Complex
pdb|3I1Y|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3I28|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3KOO|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3OTQ|A Chain A, Soluble Epoxide Hydrolase In Complex With Pyrazole
Antagonist
pdb|4HAI|A Chain A, Crystal Structure Of Human Soluble Epoxide Hydrolase
Complexed With N-
Cycloheptyl-1-(mesitylsulfonyl)piperidine-4-carboxamide
Length = 555
Score = 33.1 bits (74), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 19 PHFVLVHGISGGAWCW-YKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSF--DDYNKP 75
P L HG + W Y++ L + +GY+V +++KG G + S I + + K
Sbjct: 259 PAVCLCHGFPESWYSWRYQIPALAQ-AGYRVLAMDMKGYG-ESSAPPEIEEYCMEVLCKE 316
Query: 76 LMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYL 118
++ F+ L ++ V +GH GG+ + + + ++R L
Sbjct: 317 MVTFLDKLGLSQAV-FIGHDWGGMLVWYMALFYPERVRAVASL 358
>pdb|3PDC|A Chain A, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
pdb|3PDC|B Chain B, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
Length = 344
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 19 PHFVLVHGISGGAWCW-YKVRCLMENSGYKVSCINLKGSG--TDPSDANSIHSFDDYNKP 75
P L HG + W Y++ L + +GY+V +++KG G + P + + + K
Sbjct: 55 PAVCLCHGFPESWYSWRYQIPALAQ-AGYRVLAMDMKGYGESSAPPEIEE-YCMEVLCKE 112
Query: 76 LMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATML 123
++ F+ L ++ V +GH GG+ + + + ++R L +
Sbjct: 113 MVTFLDKLGLSQAV-FIGHDWGGMLVWYMALFYPERVRAVASLNTPFI 159
>pdb|1U2E|A Chain A, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|B Chain B, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|C Chain C, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|D Chain D, Crystal Structure Of The C-C Bond Hydrolase Mhpc
Length = 289
Score = 32.7 bits (73), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 22 VLVHGISGGAWCW----YKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLM 77
VL+HG GA W + L+E +GY+V ++ G G S NS S D N ++
Sbjct: 40 VLLHGSGPGATGWANFSRNIDPLVE-AGYRVILLDCPGWGKSDSVVNS-GSRSDLNARIL 97
Query: 78 DFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKI 112
+ D K+ L+G+S GG S + K+ ++
Sbjct: 98 KSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERV 132
>pdb|3F96|A Chain A, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By Sarin
pdb|3F96|B Chain B, Crystal Structure Of Human Plasma Platelet Activating
Factor Acetylhydrolase Covalently Inhibited By Sarin
Length = 383
Score = 32.7 bits (73), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 10/106 (9%)
Query: 30 GAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPL---------MDFM 80
G W +R L + + ++ + S A S+ D+ KP+ M+ +
Sbjct: 153 GDKSWLYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQL 212
Query: 81 SSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLG 126
D EK+ ++GH GG ++ Q + + R + L A M LG
Sbjct: 213 KDSIDREKIAVIGHXFGGATVIQTLSE-DQRFRCGIALDAWMFPLG 257
>pdb|2PSF|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSF|B Chain B, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 310
Score = 32.7 bits (73), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Query: 22 VLVHGISGGAWCWYKVRCLMENSGYKVSCI--NLKGSGTDPSDANSIHSFDDYNKPLMDF 79
+ +HG + ++ W V +E CI +L G G N + D+ K L +
Sbjct: 47 IFLHGNATSSYLWRHVVPHIEPVA---RCIIPDLIGMGKSGKSGNGSYRLLDHYKYLTAW 103
Query: 80 MSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122
L +K+I VGH G +++ ++I+ V++ + +
Sbjct: 104 FELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVV 146
>pdb|2PSD|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSE|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 318
Score = 32.3 bits (72), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Query: 22 VLVHGISGGAWCWYKVRCLMENSGYKVSCI--NLKGSGTDPSDANSIHSFDDYNKPLMDF 79
+ +HG + ++ W V +E CI +L G G N + D+ K L +
Sbjct: 47 IFLHGNATSSYLWRHVVPHIEPVA---RCIIPDLIGMGKSGKSGNGSYRLLDHYKYLTAW 103
Query: 80 MSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122
L +K+I VGH G +++ ++I+ V++ + +
Sbjct: 104 FELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVV 146
>pdb|2PSJ|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSJ|B Chain B, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 319
Score = 32.3 bits (72), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Query: 22 VLVHGISGGAWCWYKVRCLMENSGYKVSCI--NLKGSGTDPSDANSIHSFDDYNKPLMDF 79
+ +HG + ++ W V +E CI +L G G N + D+ K L +
Sbjct: 48 IFLHGNATSSYLWRHVVPHIEPVA---RCIIPDLIGMGKSGKSGNGSYRLLDHYKYLTAW 104
Query: 80 MSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122
L +K+I VGH G +++ ++I+ V++ + +
Sbjct: 105 FELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVV 147
>pdb|2PSH|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSH|B Chain B, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 319
Score = 32.3 bits (72), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Query: 22 VLVHGISGGAWCWYKVRCLMENSGYKVSCI--NLKGSGTDPSDANSIHSFDDYNKPLMDF 79
+ +HG + ++ W V +E CI +L G G N + D+ K L +
Sbjct: 48 IFLHGNATSSYLWRHVVPHIEPVA---RCIIPDLIGMGKSGKSGNGSYRLLDHYKYLTAW 104
Query: 80 MSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122
L +K+I VGH G +++ ++I+ V++ + +
Sbjct: 105 FELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVV 147
>pdb|2XMZ|A Chain A, Structure Of Menh From S. Aureus
Length = 269
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 21 FVLVHGISGGAWCWYK-VRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDF 79
V +HG + ++ + +N Y V I+L G G D S + +F DY L+D
Sbjct: 19 LVFLHGFLSDSRTYHNHIEKFTDN--YHVITIDLPGHGEDQSSMDETWNF-DYITTLLDR 75
Query: 80 MSSLTDNEKVILVGHSAGG 98
+ ++ + L G+S GG
Sbjct: 76 ILDKYKDKSITLFGYSMGG 94
>pdb|1EHY|A Chain A, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|B Chain B, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|C Chain C, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|D Chain D, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
Length = 294
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 19 PHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSG-TDPSDANSI--HSFD---DY 72
P +L+HG G W W KV + Y V +L+G G ++ D N + +S D D
Sbjct: 30 PTLLLLHGWPGFWWEWSKVIGPLAEH-YDVIVPDLRGFGDSEKPDLNDLSKYSLDKAADD 88
Query: 73 NKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNK-IRLAVY 117
L+D + EK +VGH + + + K+ ++ I+ A++
Sbjct: 89 QAALLDALGI----EKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIF 130
>pdb|2ZJF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Epoxide
Hydrolase B Complexed With An Inhibitor
Length = 362
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 13 PAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSG 57
P + Q P VL+HG + W + +GY+V I+ +G G
Sbjct: 28 PPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYG 72
>pdb|2E3J|A Chain A, The Crystal Structure Of Epoxide Hydrolase B (Rv1938)
From Mycobacterium Tuberculosis At 2.1 Angstrom
Length = 356
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 13 PAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSG 57
P + Q P VL+HG + W + +GY+V I+ +G G
Sbjct: 22 PPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYG 66
>pdb|4FE3|A Chain A, Structure Of Murine Cytosolic 5'-Nucleotidase Iii
Complexed With Uridinine Monophosphate
Length = 297
Score = 29.6 bits (65), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 13/67 (19%)
Query: 66 IHSFDDYNKPL--MDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATML 123
IH F+ ++ L D+ S L DN +IL+G S G L + V +L
Sbjct: 208 IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMAD-----------GVANVEHIL 256
Query: 124 KLGFCTD 130
K+G+ D
Sbjct: 257 KIGYLND 263
>pdb|2G07|A Chain A, X-Ray Structure Of Mouse Pyrimidine 5'-Nucleotidase Type
1, Phospho- Enzyme Intermediate Analog With Beryllium
Fluoride
pdb|2G07|B Chain B, X-Ray Structure Of Mouse Pyrimidine 5'-Nucleotidase Type
1, Phospho- Enzyme Intermediate Analog With Beryllium
Fluoride
Length = 297
Score = 29.6 bits (65), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 66 IHSFDDYNKPL--MDFMSSLTDNEKVILVGHSAGGL 99
IH F+ ++ L D+ S L DN +IL+G S G L
Sbjct: 208 IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDL 243
>pdb|2BDU|A Chain A, X-Ray Structure Of A Cytosolic 5'-Nucleotidase Iii From
Mus Musculus Mm.158936
pdb|2BDU|B Chain B, X-Ray Structure Of A Cytosolic 5'-Nucleotidase Iii From
Mus Musculus Mm.158936
pdb|2G06|A Chain A, X-ray Structure Of Mouse Pyrimidine 5'-nucleotidase Type
1, With Bound Magnesium(ii)
pdb|2G06|B Chain B, X-ray Structure Of Mouse Pyrimidine 5'-nucleotidase Type
1, With Bound Magnesium(ii)
pdb|2G08|A Chain A, X-Ray Structure Of Mouse Pyrimidine 5'-Nucleotidase Type
1, Product- Transition Complex Analog With Aluminum
Fluoride
pdb|2G08|B Chain B, X-Ray Structure Of Mouse Pyrimidine 5'-Nucleotidase Type
1, Product- Transition Complex Analog With Aluminum
Fluoride
pdb|2G09|A Chain A, X-ray Structure Of Mouse Pyrimidine 5'-nucleotidase Type
1, Product Complex
pdb|2G09|B Chain B, X-ray Structure Of Mouse Pyrimidine 5'-nucleotidase Type
1, Product Complex
pdb|2G0A|A Chain A, X-Ray Structure Of Mouse Pyrimidine 5'-Nucleotidase Type 1
With Lead(Ii) Bound In Active Site
pdb|2G0A|B Chain B, X-Ray Structure Of Mouse Pyrimidine 5'-Nucleotidase Type 1
With Lead(Ii) Bound In Active Site
pdb|2Q4T|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of A
Cytosolic 5'-Nucleotidase Iii From Mus Musculus
Mm.158936
pdb|2Q4T|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of A
Cytosolic 5'-Nucleotidase Iii From Mus Musculus
Mm.158936
Length = 297
Score = 29.6 bits (65), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 66 IHSFDDYNKPL--MDFMSSLTDNEKVILVGHSAGGL 99
IH F+ ++ L D+ S L DN +IL+G S G L
Sbjct: 208 IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDL 243
>pdb|2HIH|A Chain A, Crystal Structure Of Staphylococcus Hyicus Lipase
pdb|2HIH|B Chain B, Crystal Structure Of Staphylococcus Hyicus Lipase
Length = 431
Score = 29.3 bits (64), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 52/142 (36%), Gaps = 39/142 (27%)
Query: 13 PAEVQKPH-------FVLVHGISG--------GAWCWYKVRCLMEN----SGYK-----V 48
P VQ P FV VHG +G G W + + N +GY+ V
Sbjct: 40 PEAVQNPENPKNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASV 99
Query: 49 SCIN------------LKGSGTDPSDANS-IHSFDDYNKPLMDFMSSLTDNEKVILVGHS 95
S + LKG D A+S + + Y K + V +GHS
Sbjct: 100 SALASNHERAVELYYYLKGGRVDYGAAHSEKYGHERYGKTYEGVLKDWKPGHPVHFIGHS 159
Query: 96 AGGLSITQASH--KFGNKIRLA 115
GG +I H +FG+K +A
Sbjct: 160 MGGQTIRLLEHYLRFGDKAEIA 181
>pdb|3L6X|A Chain A, Crystal Structure Of P120 Catenin In Complex With
E-Cadherin
pdb|3L6Y|A Chain A, Crystal Structure Of P120 Catenin In Complex With
E-cadherin
pdb|3L6Y|C Chain C, Crystal Structure Of P120 Catenin In Complex With
E-cadherin
pdb|3L6Y|E Chain E, Crystal Structure Of P120 Catenin In Complex With
E-cadherin
Length = 584
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 32 WCWYKVRCLMENSGYKVS--CINLKGSGTDPSDANSIHSFDDYNKPLMD 78
W + ++R +E G+K S +NL + S + S HS+DD PL+D
Sbjct: 475 WGYKELRKPLEKEGWKKSDFQVNLNNA----SRSQSSHSYDDSTLPLID 519
>pdb|1PD6|A Chain A, The Nmr Structure Of Domain C2 Of Human Cardiac Myosin
Binding Protein C
Length = 104
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 10/39 (25%)
Query: 109 GNKIRLAVYLAATMLKLGFCTDEDVKIRWRRNWHDCQLS 147
G+KIRL V LA D D +++W +N + Q+S
Sbjct: 31 GHKIRLTVELA----------DHDAEVKWLKNGQEIQMS 59
>pdb|4F0J|A Chain A, Crystal Structure Of A Probable Hydrolytic Enzyme (Pa3053)
From Pseudomonas Aeruginosa Pao1 At 1.50 A Resolution
Length = 315
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 21 FVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFM 80
+L HG + A W + ++ ++GY+V ++ G A+ +SF +
Sbjct: 49 ILLXHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYSFQQLAANTHALL 108
Query: 81 SSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAV 116
L + ++GHS GG T+ + + ++ V
Sbjct: 109 ERL-GVARASVIGHSXGGXLATRYALLYPRQVERLV 143
>pdb|2XVI|A Chain A, Crystal Structure Of The Mutant Bacterial Flavin
Containing Monooxygenase (Y207s)
pdb|2XVI|B Chain B, Crystal Structure Of The Mutant Bacterial Flavin
Containing Monooxygenase (Y207s)
pdb|2XVI|C Chain C, Crystal Structure Of The Mutant Bacterial Flavin
Containing Monooxygenase (Y207s)
pdb|2XVJ|A Chain A, Crystal Structure Of The Mutant Bacterial Flavin
Containing Monooxygenase In Complex With Indole
pdb|2XVJ|B Chain B, Crystal Structure Of The Mutant Bacterial Flavin
Containing Monooxygenase In Complex With Indole
pdb|2XVJ|C Chain C, Crystal Structure Of The Mutant Bacterial Flavin
Containing Monooxygenase In Complex With Indole
Length = 464
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 12/67 (17%)
Query: 78 DFMSSLTDNEK-VILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLGFCTDEDVKIR 136
DF +L +K V+LVG S+ I +K+G K ++ Y A M G+ +
Sbjct: 188 DFRDALEFKDKTVLLVGSSSSAEDIGSQCYKYGAKKLISCYRTAPM---GY--------K 236
Query: 137 WRRNWHD 143
W NW +
Sbjct: 237 WPENWDE 243
>pdb|3FNB|A Chain A, Crystal Structure Of Acylaminoacyl Peptidase Smu_737 From
Streptococcus Mutans Ua159
pdb|3FNB|B Chain B, Crystal Structure Of Acylaminoacyl Peptidase Smu_737 From
Streptococcus Mutans Ua159
Length = 405
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 21/96 (21%)
Query: 46 YKVSCINLKGSGTDPS-------DANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGG 98
Y V ++L G G +P+ DA + S ++D+ + T EK+ + G S GG
Sbjct: 188 YNVLXVDLPGQGKNPNQGLHFEVDARAAIS------AILDWYQAPT--EKIAIAGFSGGG 239
Query: 99 LSITQASHKFGNKIR-----LAVYLAATMLKLGFCT 129
QA K +I+ +Y A + ++ F T
Sbjct: 240 YFTAQAVEK-DKRIKAWIASTPIYDVAEVFRISFST 274
>pdb|2D7U|A Chain A, Crystal Structure Of Hypothetical Adenylosuccinate
Synthetase, Ph0438 From Pyrococcus Horikoshii Ot3
Length = 339
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 35/91 (38%)
Query: 31 AWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVI 90
A K + L +GY I GSG P++A+ + K + + LTD + I
Sbjct: 104 AIIEEKHKQLDRTNGYLHGKIGTTGSGCGPANADRVMRKAKQAKDVKELEPYLTDVAQEI 163
Query: 91 LVGHSAGGLSITQASHKFGNKIRLAVYLAAT 121
G L + + + FG + Y T
Sbjct: 164 NDALDEGSLVLVEGTQGFGLSLYYGTYPYVT 194
>pdb|4F21|A Chain A, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|B Chain B, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|C Chain C, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|D Chain D, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|E Chain E, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|F Chain F, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|G Chain G, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|H Chain H, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
Length = 246
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 15/92 (16%)
Query: 33 CWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILV 92
WY ++ L NS +V D NS S NK + ++ +E +IL
Sbjct: 89 AWYDIKSLDANSLNRV---------VDVEGINS--SIAKVNKLIDSQVNQGIASENIILA 137
Query: 93 GHSAGGLSIT----QASHKFGNKIRLAVYLAA 120
G S GG+ T + K G + L+ YL A
Sbjct: 138 GFSQGGIIATYTAITSQRKLGGIMALSTYLPA 169
>pdb|3D0K|A Chain A, Crystal Structure Of The Lpqc, Poly(3-Hydroxybutyrate)
Depolymerase From Bordetella Parapertussis
pdb|3D0K|B Chain B, Crystal Structure Of The Lpqc, Poly(3-Hydroxybutyrate)
Depolymerase From Bordetella Parapertussis
Length = 304
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 81 SSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLGFCT 129
+ + D E+V L GHSAGG Q H+ + A + A T G+ T
Sbjct: 134 AEIADCEQVYLFGHSAGG----QFVHRLXSSQPHAPFHAVTAANPGWYT 178
>pdb|3K2Q|A Chain A, Crystal Structure Of Pyrophosphate-Dependent
Phosphofructokinase From Marinobacter Aquaeolei,
Northeast Structural Genomics Consortium Target Mqr88
pdb|3K2Q|B Chain B, Crystal Structure Of Pyrophosphate-Dependent
Phosphofructokinase From Marinobacter Aquaeolei,
Northeast Structural Genomics Consortium Target Mqr88
pdb|3K2Q|C Chain C, Crystal Structure Of Pyrophosphate-Dependent
Phosphofructokinase From Marinobacter Aquaeolei,
Northeast Structural Genomics Consortium Target Mqr88
Length = 420
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 6 NMREIKKPAEVQKPH---FVLVHGISGGAWCWYKVRCLMENSGYKVSCINL 53
N RE ++ EV + H + +G YKV L + GY ++CI +
Sbjct: 89 NQREYERLIEVFRAHDIGYFFYNGGGDSQDTAYKVSQLADRMGYPITCIGV 139
>pdb|2XVE|A Chain A, Crystal Structure Of Bacterial Flavin-Containing
Monooxygenase
pdb|2XVE|B Chain B, Crystal Structure Of Bacterial Flavin-Containing
Monooxygenase
pdb|2XVE|C Chain C, Crystal Structure Of Bacterial Flavin-Containing
Monooxygenase
pdb|2XVH|A Chain A, Crystal Structure Of Bacterial Flavin Containing
Monooxygenase In Complex With Nadp
pdb|2XVH|B Chain B, Crystal Structure Of Bacterial Flavin Containing
Monooxygenase In Complex With Nadp
pdb|2XVH|C Chain C, Crystal Structure Of Bacterial Flavin Containing
Monooxygenase In Complex With Nadp
Length = 464
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 12/67 (17%)
Query: 78 DFMSSLTDNEK-VILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLGFCTDEDVKIR 136
DF +L +K V+LVG S I +K+G K ++ Y A M G+ +
Sbjct: 188 DFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPM---GY--------K 236
Query: 137 WRRNWHD 143
W NW +
Sbjct: 237 WPENWDE 243
>pdb|2OCG|A Chain A, Crystal Structure Of Human Valacyclovir Hydrolase
pdb|2OCI|A Chain A, Crystal Structure Of Valacyclovir Hydrolase Complexed With
A Product Analogue
Length = 254
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 46 YKVSCINLKGSG-TDPSDANSIHSFDDYN-KPLMDFMSSLTDNEKVILVGHSAGGLSITQ 103
+ V + +G G + P D + F + + K +D M +L +KV L+G S GG++
Sbjct: 52 FTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMKALK-FKKVSLLGWSDGGITALI 110
Query: 104 ASHKFGNKIRLAVYLAATMLKLGFCTDEDVKI 135
A+ K+ + I V A + TDED I
Sbjct: 111 AAAKYPSYIHKMVIWGAN----AYVTDEDSMI 138
>pdb|2XLS|A Chain A, Joint-Functions Of Protein Residues And Nadp(H) In
Oxygen-Activation By Flavin-Containing Monooxygenase:
Asn78lys Mutant
pdb|2XLS|B Chain B, Joint-Functions Of Protein Residues And Nadp(H) In
Oxygen-Activation By Flavin-Containing Monooxygenase:
Asn78lys Mutant
pdb|2XLS|C Chain C, Joint-Functions Of Protein Residues And Nadp(H) In
Oxygen-Activation By Flavin-Containing Monooxygenase:
Asn78lys Mutant
pdb|2XLS|D Chain D, Joint-Functions Of Protein Residues And Nadp(H) In
Oxygen-Activation By Flavin-Containing Monooxygenase:
Asn78lys Mutant
Length = 461
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 12/67 (17%)
Query: 78 DFMSSLTDNEK-VILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLGFCTDEDVKIR 136
DF +L +K V+LVG S I +K+G K ++ Y A M G+ +
Sbjct: 193 DFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPM---GY--------K 241
Query: 137 WRRNWHD 143
W NW +
Sbjct: 242 WPENWDE 248
>pdb|2OCK|A Chain A, Crystal Structure Of Valacyclovir Hydrolase D123n Mutant
Length = 254
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 46 YKVSCINLKGSG-TDPSDANSIHSFDDYN-KPLMDFMSSLTDNEKVILVGHSAGGLSITQ 103
+ V + +G G + P D + F + + K +D M +L +KV L+G S GG++
Sbjct: 52 FTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMKALK-FKKVSLLGWSNGGITALI 110
Query: 104 ASHKFGNKIRLAVYLAATMLKLGFCTDEDVKI 135
A+ K+ + I V A + TDED I
Sbjct: 111 AAAKYPSYIHKMVIWGAN----AYVTDEDSMI 138
>pdb|2XLR|A Chain A, Joint-Functions Of Protein Residues And Nadp(H) In
Oxygen-Activation By Flavin-Containing Monooxygenase:
Asn78asp Mutant
pdb|2XLR|B Chain B, Joint-Functions Of Protein Residues And Nadp(H) In
Oxygen-Activation By Flavin-Containing Monooxygenase:
Asn78asp Mutant
pdb|2XLR|C Chain C, Joint-Functions Of Protein Residues And Nadp(H) In
Oxygen-Activation By Flavin-Containing Monooxygenase:
Asn78asp Mutant
pdb|2XLR|D Chain D, Joint-Functions Of Protein Residues And Nadp(H) In
Oxygen-Activation By Flavin-Containing Monooxygenase:
Asn78asp Mutant
Length = 461
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 12/67 (17%)
Query: 78 DFMSSLTDNEK-VILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLGFCTDEDVKIR 136
DF +L +K V+LVG S I +K+G K ++ Y A M G+ +
Sbjct: 193 DFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPM---GY--------K 241
Query: 137 WRRNWHD 143
W NW +
Sbjct: 242 WPENWDE 248
>pdb|2XLP|A Chain A, Joint-Functions Of Protein Residues And Nadp(H) In Oxygen-
Activation By Flavin-Containing Monooxygenase: Asn78ser
Mutant
pdb|2XLP|B Chain B, Joint-Functions Of Protein Residues And Nadp(H) In Oxygen-
Activation By Flavin-Containing Monooxygenase: Asn78ser
Mutant
pdb|2XLP|C Chain C, Joint-Functions Of Protein Residues And Nadp(H) In Oxygen-
Activation By Flavin-Containing Monooxygenase: Asn78ser
Mutant
pdb|2XLP|D Chain D, Joint-Functions Of Protein Residues And Nadp(H) In Oxygen-
Activation By Flavin-Containing Monooxygenase: Asn78ser
Mutant
Length = 461
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 12/67 (17%)
Query: 78 DFMSSLTDNEK-VILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLGFCTDEDVKIR 136
DF +L +K V+LVG S I +K+G K ++ Y A M G+ +
Sbjct: 193 DFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPM---GY--------K 241
Query: 137 WRRNWHD 143
W NW +
Sbjct: 242 WPENWDE 248
>pdb|2VQ7|A Chain A, Bacterial Flavin-Containing Monooxygenase In Complex With
Nadp: Native Data
pdb|2VQ7|B Chain B, Bacterial Flavin-Containing Monooxygenase In Complex With
Nadp: Native Data
pdb|2VQ7|C Chain C, Bacterial Flavin-Containing Monooxygenase In Complex With
Nadp: Native Data
pdb|2VQ7|D Chain D, Bacterial Flavin-Containing Monooxygenase In Complex With
Nadp: Native Data
pdb|2VQB|A Chain A, Bacterial Flavin-Containing Monooxygenase In Complex With
Nadp: Soaking In Aerated Solution
pdb|2VQB|B Chain B, Bacterial Flavin-Containing Monooxygenase In Complex With
Nadp: Soaking In Aerated Solution
pdb|2VQB|C Chain C, Bacterial Flavin-Containing Monooxygenase In Complex With
Nadp: Soaking In Aerated Solution
pdb|2VQB|D Chain D, Bacterial Flavin-Containing Monooxygenase In Complex With
Nadp: Soaking In Aerated Solution
pdb|2XLT|A Chain A, Joint-Functions Of Protein Residues And Nadp(H) In
Oxygen-Activation By Flavin-Containing Monooxygenase:
Complex With 3-Acetylpyridine Adenine Dinucleotide
Phosphate (Apadp)
pdb|2XLT|B Chain B, Joint-Functions Of Protein Residues And Nadp(H) In
Oxygen-Activation By Flavin-Containing Monooxygenase:
Complex With 3-Acetylpyridine Adenine Dinucleotide
Phosphate (Apadp)
pdb|2XLT|C Chain C, Joint-Functions Of Protein Residues And Nadp(H) In
Oxygen-Activation By Flavin-Containing Monooxygenase:
Complex With 3-Acetylpyridine Adenine Dinucleotide
Phosphate (Apadp)
pdb|2XLT|D Chain D, Joint-Functions Of Protein Residues And Nadp(H) In
Oxygen-Activation By Flavin-Containing Monooxygenase:
Complex With 3-Acetylpyridine Adenine Dinucleotide
Phosphate (Apadp)
pdb|2XLU|A Chain A, Joint-Functions Of Protein Residues And Nadp(H) In
Oxygen-Activation By Flavin-Containing Monooxygenase:
Complex With Thionadp
pdb|2XLU|B Chain B, Joint-Functions Of Protein Residues And Nadp(H) In
Oxygen-Activation By Flavin-Containing Monooxygenase:
Complex With Thionadp
pdb|2XLU|C Chain C, Joint-Functions Of Protein Residues And Nadp(H) In
Oxygen-Activation By Flavin-Containing Monooxygenase:
Complex With Thionadp
pdb|2XLU|D Chain D, Joint-Functions Of Protein Residues And Nadp(H) In
Oxygen-Activation By Flavin-Containing Monooxygenase:
Complex With Thionadp
Length = 461
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 12/67 (17%)
Query: 78 DFMSSLTDNEK-VILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLGFCTDEDVKIR 136
DF +L +K V+LVG S I +K+G K ++ Y A M G+ +
Sbjct: 193 DFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPM---GY--------K 241
Query: 137 WRRNWHD 143
W NW +
Sbjct: 242 WPENWDE 248
>pdb|2JGA|A Chain A, Crystal Structure Of Human Cytosolic 5'-Nucleotidase Iii
In Complex With Phosphate And Magnesium
Length = 292
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 66 IHSFDDYNKPL--MDFMSSLTDNEKVILVGHSAGGLSIT 102
IH F+ ++ L ++ + L DN +IL+G S G L +
Sbjct: 203 IHVFNKHDGALRNTEYFNQLKDNSNIILLGDSQGDLRMA 241
>pdb|2CN1|A Chain A, Crystal Structure Of Human Cytosolic 5'-Nucleotidase Iii (
Nt5c3)(Casp Target)
pdb|2VKQ|A Chain A, Crystal Structure Of Human Cytosolic 5'-Nucleotidase Iii (
Cn-Iii, Nt5c3) In Complex With Beryllium Trifluoride
Length = 292
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 66 IHSFDDYNKPL--MDFMSSLTDNEKVILVGHSAGGLSIT 102
IH F+ ++ L ++ + L DN +IL+G S G L +
Sbjct: 203 IHVFNKHDGALRNTEYFNQLKDNSNIILLGDSQGDLRMA 241
>pdb|3OOS|A Chain A, The Structure Of An AlphaBETA FOLD FAMILY HYDROLASE FROM
BACILLUS Anthracis Str. Sterne
Length = 278
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 46 YKVSCINLKGSG-TDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGG 98
Y V +NLKG G +D + +S +S + K L +L N K GHSAGG
Sbjct: 50 YSVYLVNLKGCGNSDSAKNDSEYSXTETIKDLEAIREALYIN-KWGFAGHSAGG 102
>pdb|2WBA|A Chain A, Properties Of Trypanothione Reductase From T. Brucei
pdb|2WBA|B Chain B, Properties Of Trypanothione Reductase From T. Brucei
Length = 492
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 3 EEINMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSD 62
EE+ +E +K A L+H ISG + + + + +S V ++L G G P
Sbjct: 379 EEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGA-PEI 437
Query: 63 ANSIHSFDDYNKPLMDFMSSL 83
++ N + DF +++
Sbjct: 438 IQAVGVCLRLNAKISDFYNTI 458
>pdb|2WOI|A Chain A, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|B Chain B, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|C Chain C, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|D Chain D, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOV|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOW|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WP5|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP6|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WPC|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPE|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPF|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
Length = 495
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 3 EEINMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSD 62
EE+ +E +K A L+H ISG + + + + +S V ++L G G P
Sbjct: 382 EEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGA-PEI 440
Query: 63 ANSIHSFDDYNKPLMDFMSSL 83
++ N + DF +++
Sbjct: 441 IQAVGVCLRLNAKISDFYNTI 461
>pdb|2R9Z|A Chain A, Glutathione Amide Reductase From Chromatium Gracile
pdb|2R9Z|B Chain B, Glutathione Amide Reductase From Chromatium Gracile
pdb|2RAB|A Chain A, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
pdb|2RAB|B Chain B, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
Length = 463
Score = 25.8 bits (55), Expect = 8.6, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 83 LTDNEKVILVGHSAGGLSITQASHKFGNKIRL--AVYLAATMLKLGFCTDEDVKIRW 137
+T + +I +G +GGL++ + + FG ++ L + L T + +G C + K+ W
Sbjct: 1 MTQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKALGGTCVNVG-CVPK--KVMW 54
>pdb|2UVA|G Chain G, Crystal Structure Of Fatty Acid Synthase From Thermomyces
Lanuginosus At 3.1 Angstrom Resolution. This File
Contains The Beta Subunits Of The Fatty Acid Synthase.
The Entire Crystal Structure Consists Of One
Heterododecameric Fatty Acid Synthase And Is Described
In Remark 400
pdb|2UVA|H Chain H, Crystal Structure Of Fatty Acid Synthase From Thermomyces
Lanuginosus At 3.1 Angstrom Resolution. This File
Contains The Beta Subunits Of The Fatty Acid Synthase.
The Entire Crystal Structure Consists Of One
Heterododecameric Fatty Acid Synthase And Is Described
In Remark 400
pdb|2UVA|I Chain I, Crystal Structure Of Fatty Acid Synthase From Thermomyces
Lanuginosus At 3.1 Angstrom Resolution. This File
Contains The Beta Subunits Of The Fatty Acid Synthase.
The Entire Crystal Structure Consists Of One
Heterododecameric Fatty Acid Synthase And Is Described
In Remark 400
pdb|2UVA|J Chain J, Crystal Structure Of Fatty Acid Synthase From Thermomyces
Lanuginosus At 3.1 Angstrom Resolution. This File
Contains The Beta Subunits Of The Fatty Acid Synthase.
The Entire Crystal Structure Consists Of One
Heterododecameric Fatty Acid Synthase And Is Described
In Remark 400
pdb|2UVA|K Chain K, Crystal Structure Of Fatty Acid Synthase From Thermomyces
Lanuginosus At 3.1 Angstrom Resolution. This File
Contains The Beta Subunits Of The Fatty Acid Synthase.
The Entire Crystal Structure Consists Of One
Heterododecameric Fatty Acid Synthase And Is Described
In Remark 400
pdb|2UVA|L Chain L, Crystal Structure Of Fatty Acid Synthase From Thermomyces
Lanuginosus At 3.1 Angstrom Resolution. This File
Contains The Beta Subunits Of The Fatty Acid Synthase.
The Entire Crystal Structure Consists Of One
Heterododecameric Fatty Acid Synthase And Is Described
In Remark 400
pdb|2UVC|G Chain G, Crystal Structure Of Fatty Acid Synthase Complexed With
Nadp+ From Thermomyces Lanuginosus At 3.1 Angstrom
Resolution. This File Contains The Beta Subunits Of The
Fatty Acid Synthase. The Entire Crystal Structure
Consists Of One Heterododecameric Fatty Acid Synthase
And Is Described In Remark 400
pdb|2UVC|H Chain H, Crystal Structure Of Fatty Acid Synthase Complexed With
Nadp+ From Thermomyces Lanuginosus At 3.1 Angstrom
Resolution. This File Contains The Beta Subunits Of The
Fatty Acid Synthase. The Entire Crystal Structure
Consists Of One Heterododecameric Fatty Acid Synthase
And Is Described In Remark 400
pdb|2UVC|I Chain I, Crystal Structure Of Fatty Acid Synthase Complexed With
Nadp+ From Thermomyces Lanuginosus At 3.1 Angstrom
Resolution. This File Contains The Beta Subunits Of The
Fatty Acid Synthase. The Entire Crystal Structure
Consists Of One Heterododecameric Fatty Acid Synthase
And Is Described In Remark 400
pdb|2UVC|J Chain J, Crystal Structure Of Fatty Acid Synthase Complexed With
Nadp+ From Thermomyces Lanuginosus At 3.1 Angstrom
Resolution. This File Contains The Beta Subunits Of The
Fatty Acid Synthase. The Entire Crystal Structure
Consists Of One Heterododecameric Fatty Acid Synthase
And Is Described In Remark 400
pdb|2UVC|K Chain K, Crystal Structure Of Fatty Acid Synthase Complexed With
Nadp+ From Thermomyces Lanuginosus At 3.1 Angstrom
Resolution. This File Contains The Beta Subunits Of The
Fatty Acid Synthase. The Entire Crystal Structure
Consists Of One Heterododecameric Fatty Acid Synthase
And Is Described In Remark 400
pdb|2UVC|L Chain L, Crystal Structure Of Fatty Acid Synthase Complexed With
Nadp+ From Thermomyces Lanuginosus At 3.1 Angstrom
Resolution. This File Contains The Beta Subunits Of The
Fatty Acid Synthase. The Entire Crystal Structure
Consists Of One Heterododecameric Fatty Acid Synthase
And Is Described In Remark 400
Length = 2060
Score = 25.8 bits (55), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 67 HSFDDYNKPLMDFMSSLTDNEKVILVGHSAGG 98
HSF+D+++P++ S + ++LV S G
Sbjct: 734 HSFEDFHQPILLMYSRIRKCSNIVLVAGSGFG 765
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,760,390
Number of Sequences: 62578
Number of extensions: 187731
Number of successful extensions: 550
Number of sequences better than 100.0: 85
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 504
Number of HSP's gapped (non-prelim): 87
length of query: 148
length of database: 14,973,337
effective HSP length: 90
effective length of query: 58
effective length of database: 9,341,317
effective search space: 541796386
effective search space used: 541796386
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)