Query 032072
Match_columns 148
No_of_seqs 122 out of 1358
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 09:14:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032072.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/032072hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 99.9 8.8E-23 1.9E-27 142.9 13.6 115 2-122 17-137 (294)
2 PRK00870 haloalkane dehalogena 99.9 1.8E-22 3.8E-27 141.9 14.4 115 4-122 35-150 (302)
3 PLN02211 methyl indole-3-aceta 99.9 1.8E-22 4E-27 140.1 13.9 113 16-128 16-128 (273)
4 TIGR02240 PHA_depoly_arom poly 99.9 3.4E-22 7.3E-27 138.9 13.3 116 2-122 11-126 (276)
5 PLN02965 Probable pheophorbida 99.9 3.9E-22 8.4E-27 137.2 12.7 104 20-123 5-108 (255)
6 PLN02385 hydrolase; alpha/beta 99.9 5.2E-22 1.1E-26 142.2 13.7 121 2-122 71-197 (349)
7 PRK03592 haloalkane dehalogena 99.9 1.9E-21 4.1E-26 136.2 15.3 113 2-122 16-128 (295)
8 PHA02857 monoglyceride lipase; 99.9 3.5E-21 7.6E-26 133.6 15.3 121 2-123 10-133 (276)
9 PLN02679 hydrolase, alpha/beta 99.9 1.9E-21 4.2E-26 139.8 14.3 117 4-122 73-191 (360)
10 PRK10673 acyl-CoA esterase; Pr 99.9 1.7E-21 3.7E-26 133.5 13.3 113 5-121 3-115 (255)
11 TIGR03611 RutD pyrimidine util 99.9 2.3E-21 4.9E-26 132.3 12.9 114 6-122 2-115 (257)
12 PLN02298 hydrolase, alpha/beta 99.9 3.4E-21 7.3E-26 137.0 13.6 121 2-122 42-169 (330)
13 PLN03087 BODYGUARD 1 domain co 99.9 5.6E-21 1.2E-25 140.7 14.6 119 3-122 186-309 (481)
14 TIGR03056 bchO_mg_che_rel puta 99.9 5E-21 1.1E-25 132.4 13.1 115 3-122 16-130 (278)
15 PRK10749 lysophospholipase L2; 99.9 6.5E-21 1.4E-25 135.6 14.0 119 2-122 40-166 (330)
16 PRK03204 haloalkane dehalogena 99.9 1.4E-20 3E-25 131.5 13.5 104 17-122 33-136 (286)
17 PLN03084 alpha/beta hydrolase 99.9 1.7E-20 3.7E-25 135.3 13.7 116 3-123 115-233 (383)
18 PF12697 Abhydrolase_6: Alpha/ 99.9 1.8E-20 3.9E-25 125.1 12.6 100 21-122 1-101 (228)
19 KOG4178 Soluble epoxide hydrol 99.9 1.7E-20 3.6E-25 129.6 12.3 108 15-123 41-149 (322)
20 PLN02578 hydrolase 99.9 2.1E-20 4.6E-25 134.1 13.5 103 17-122 85-187 (354)
21 PRK11126 2-succinyl-6-hydroxy- 99.8 1.7E-20 3.6E-25 127.8 11.6 100 18-122 2-102 (242)
22 KOG4409 Predicted hydrolase/ac 99.8 1.9E-20 4.2E-25 130.0 11.9 110 14-125 86-198 (365)
23 TIGR03343 biphenyl_bphD 2-hydr 99.8 3.6E-20 7.8E-25 128.7 13.2 104 17-121 29-135 (282)
24 PRK06489 hypothetical protein; 99.8 3.7E-20 8.1E-25 133.1 13.0 119 2-121 49-188 (360)
25 TIGR02427 protocat_pcaD 3-oxoa 99.8 3.9E-20 8.4E-25 125.3 11.9 113 5-122 2-114 (251)
26 PRK10349 carboxylesterase BioH 99.8 5E-20 1.1E-24 126.6 11.2 96 18-121 13-108 (256)
27 COG2267 PldB Lysophospholipase 99.8 1.5E-19 3.3E-24 126.7 12.9 122 2-124 19-144 (298)
28 TIGR03101 hydr2_PEP hydrolase, 99.8 7.9E-19 1.7E-23 120.9 14.2 107 16-123 23-135 (266)
29 TIGR01392 homoserO_Ac_trn homo 99.8 2.2E-19 4.9E-24 128.7 11.5 120 2-122 15-162 (351)
30 TIGR03695 menH_SHCHC 2-succiny 99.8 3E-19 6.4E-24 120.7 11.4 103 18-122 1-105 (251)
31 TIGR01250 pro_imino_pep_2 prol 99.8 8.3E-19 1.8E-23 121.2 13.7 105 17-122 24-131 (288)
32 PRK08775 homoserine O-acetyltr 99.8 2.6E-19 5.7E-24 128.0 11.5 113 2-122 45-173 (343)
33 COG1647 Esterase/lipase [Gener 99.8 3.9E-19 8.5E-24 116.4 10.7 104 17-123 14-119 (243)
34 PLN02652 hydrolase; alpha/beta 99.8 8.7E-19 1.9E-23 127.1 13.6 119 3-122 121-245 (395)
35 PRK07581 hypothetical protein; 99.8 3.6E-19 7.9E-24 127.0 11.2 120 2-122 25-159 (339)
36 TIGR01249 pro_imino_pep_1 prol 99.8 1.2E-18 2.5E-23 122.9 13.0 116 2-122 14-130 (306)
37 TIGR01738 bioH putative pimelo 99.8 9.1E-19 2E-23 118.3 10.8 97 18-122 4-100 (245)
38 PLN02894 hydrolase, alpha/beta 99.8 4.4E-18 9.6E-23 123.9 15.0 105 16-122 103-211 (402)
39 PRK14875 acetoin dehydrogenase 99.8 2.7E-18 5.8E-23 123.7 13.7 103 17-122 130-232 (371)
40 KOG1454 Predicted hydrolase/ac 99.8 2.9E-18 6.3E-23 121.4 11.5 107 16-123 56-167 (326)
41 PRK00175 metX homoserine O-ace 99.8 3.1E-18 6.7E-23 124.0 11.8 120 2-122 32-182 (379)
42 KOG1455 Lysophospholipase [Lip 99.8 9.5E-18 2.1E-22 114.7 13.3 122 2-123 37-165 (313)
43 TIGR01607 PST-A Plasmodium sub 99.7 2.1E-17 4.6E-22 117.7 11.4 119 2-122 7-185 (332)
44 PLN02980 2-oxoglutarate decarb 99.7 7E-17 1.5E-21 133.4 14.6 103 17-121 1370-1479(1655)
45 PRK05077 frsA fermentation/res 99.7 1.3E-16 2.7E-21 116.6 14.3 118 4-122 180-300 (414)
46 PRK05855 short chain dehydroge 99.7 4.5E-17 9.6E-22 123.3 11.9 115 2-120 12-129 (582)
47 PRK13604 luxD acyl transferase 99.7 2E-16 4.3E-21 110.2 13.8 118 2-123 19-142 (307)
48 PLN02511 hydrolase 99.7 1.1E-16 2.4E-21 116.2 13.0 106 16-122 98-210 (388)
49 KOG2564 Predicted acetyltransf 99.7 3.4E-16 7.5E-21 106.0 11.4 114 5-120 62-180 (343)
50 PRK10985 putative hydrolase; P 99.7 1E-15 2.2E-20 108.8 14.2 106 16-122 56-168 (324)
51 TIGR03100 hydr1_PEP hydrolase, 99.7 2E-15 4.3E-20 105.0 14.5 103 17-123 25-135 (274)
52 TIGR03230 lipo_lipase lipoprot 99.7 6.4E-16 1.4E-20 112.5 10.6 108 16-124 39-156 (442)
53 cd00707 Pancreat_lipase_like P 99.7 3.2E-16 6.9E-21 108.9 8.5 108 16-124 34-149 (275)
54 PRK10566 esterase; Provisional 99.7 3.2E-15 7E-20 102.3 12.7 103 16-119 25-139 (249)
55 PF12695 Abhydrolase_5: Alpha/ 99.7 2.5E-15 5.5E-20 94.7 10.8 94 20-121 1-94 (145)
56 TIGR01836 PHA_synth_III_C poly 99.6 2.8E-15 6E-20 107.6 10.9 115 5-123 48-172 (350)
57 TIGR01840 esterase_phb esteras 99.6 1.8E-14 3.9E-19 96.7 12.7 109 15-123 10-131 (212)
58 PRK11071 esterase YqiA; Provis 99.6 7.8E-15 1.7E-19 96.9 10.4 88 19-122 2-93 (190)
59 PLN00021 chlorophyllase 99.6 1.8E-14 3.8E-19 101.7 12.0 110 12-122 46-166 (313)
60 PLN02872 triacylglycerol lipas 99.6 1.1E-14 2.4E-19 105.7 9.7 122 2-124 54-199 (395)
61 PF12146 Hydrolase_4: Putative 99.6 1.4E-14 3E-19 82.2 8.1 79 2-81 1-79 (79)
62 PRK06765 homoserine O-acetyltr 99.6 2.7E-14 5.9E-19 103.5 11.4 119 3-122 41-196 (389)
63 KOG2382 Predicted alpha/beta h 99.6 1.1E-13 2.3E-18 96.1 12.9 106 15-122 49-159 (315)
64 PF07819 PGAP1: PGAP1-like pro 99.6 1.1E-13 2.3E-18 93.6 12.5 111 17-127 3-128 (225)
65 PF00561 Abhydrolase_1: alpha/ 99.6 2E-14 4.4E-19 96.6 8.9 75 46-121 1-78 (230)
66 TIGR02821 fghA_ester_D S-formy 99.6 1.8E-13 4E-18 95.3 13.7 120 3-122 25-173 (275)
67 PF06342 DUF1057: Alpha/beta h 99.6 2.2E-13 4.7E-18 92.9 13.3 106 18-125 35-140 (297)
68 TIGR00976 /NonD putative hydro 99.6 4.5E-14 9.8E-19 106.8 10.8 119 2-122 6-132 (550)
69 PLN02442 S-formylglutathione h 99.5 3.3E-13 7.2E-18 94.3 13.0 121 2-123 29-179 (283)
70 TIGR01838 PHA_synth_I poly(R)- 99.5 3.1E-13 6.7E-18 101.0 13.0 117 5-122 174-302 (532)
71 PF00975 Thioesterase: Thioest 99.5 2.6E-13 5.6E-18 91.9 11.0 103 19-124 1-106 (229)
72 PRK11460 putative hydrolase; P 99.5 2.2E-13 4.8E-18 92.6 10.6 110 13-122 11-138 (232)
73 COG0596 MhpC Predicted hydrola 99.5 7.1E-13 1.5E-17 89.5 12.5 102 18-123 21-124 (282)
74 PF06500 DUF1100: Alpha/beta h 99.5 2.7E-13 5.8E-18 97.5 10.0 108 14-122 186-296 (411)
75 TIGR03502 lipase_Pla1_cef extr 99.5 9.8E-13 2.1E-17 101.5 11.1 92 18-109 449-577 (792)
76 PF10230 DUF2305: Uncharacteri 99.5 3.3E-12 7.1E-17 88.5 12.7 119 18-136 2-136 (266)
77 KOG1552 Predicted alpha/beta h 99.4 3.4E-12 7.4E-17 86.0 11.8 104 17-123 59-164 (258)
78 PRK07868 acyl-CoA synthetase; 99.4 1.6E-12 3.5E-17 104.2 12.1 114 5-122 49-177 (994)
79 KOG2984 Predicted hydrolase [G 99.4 5.2E-13 1.1E-17 87.0 5.9 118 2-124 30-151 (277)
80 PF02230 Abhydrolase_2: Phosph 99.4 1.5E-12 3.3E-17 87.6 8.1 116 9-124 5-142 (216)
81 COG0429 Predicted hydrolase of 99.4 2.7E-11 5.9E-16 84.4 13.1 118 5-122 62-185 (345)
82 KOG1838 Alpha/beta hydrolase [ 99.4 4.4E-11 9.5E-16 85.9 13.7 121 2-122 103-235 (409)
83 COG3319 Thioesterase domains o 99.4 1.9E-11 4.2E-16 83.6 11.2 101 19-123 1-104 (257)
84 COG2021 MET2 Homoserine acetyl 99.3 1.8E-11 4E-16 86.4 10.9 119 3-122 36-182 (368)
85 COG0400 Predicted esterase [Ge 99.3 1.3E-11 2.8E-16 82.1 8.9 117 9-126 9-138 (207)
86 PF12740 Chlorophyllase2: Chlo 99.3 2.5E-11 5.5E-16 82.8 9.9 110 12-122 11-131 (259)
87 KOG2565 Predicted hydrolases o 99.3 2E-11 4.3E-16 86.1 9.5 117 2-119 133-261 (469)
88 PRK10162 acetyl esterase; Prov 99.3 8E-11 1.7E-15 83.7 12.8 113 5-122 69-195 (318)
89 PF06821 Ser_hydrolase: Serine 99.3 2.1E-11 4.5E-16 79.2 8.9 90 21-123 1-92 (171)
90 KOG4391 Predicted alpha/beta h 99.3 1.7E-11 3.8E-16 80.8 7.1 117 4-123 66-185 (300)
91 COG2945 Predicted hydrolase of 99.3 1.1E-10 2.4E-15 75.5 10.3 107 15-122 25-137 (210)
92 KOG4667 Predicted esterase [Li 99.3 1.5E-10 3.3E-15 76.2 10.9 110 16-127 31-144 (269)
93 PF01738 DLH: Dienelactone hyd 99.2 1E-10 2.2E-15 78.8 9.8 105 15-120 11-130 (218)
94 PF10503 Esterase_phd: Esteras 99.2 4.2E-10 9E-15 75.7 11.6 106 17-122 15-132 (220)
95 COG3208 GrsT Predicted thioest 99.2 1.6E-10 3.5E-15 77.5 9.3 106 16-123 5-113 (244)
96 PRK10252 entF enterobactin syn 99.2 2.2E-10 4.7E-15 94.2 11.4 102 17-122 1067-1171(1296)
97 TIGR01839 PHA_synth_II poly(R) 99.2 2.9E-10 6.2E-15 85.0 10.5 114 5-122 201-328 (560)
98 COG1506 DAP2 Dipeptidyl aminop 99.2 4.1E-10 8.9E-15 86.5 11.6 119 2-122 375-507 (620)
99 COG0412 Dienelactone hydrolase 99.2 1.9E-09 4.1E-14 73.5 13.4 117 5-122 14-146 (236)
100 PF02129 Peptidase_S15: X-Pro 99.1 8E-10 1.7E-14 76.9 10.4 120 2-123 2-137 (272)
101 PF01674 Lipase_2: Lipase (cla 99.1 1.1E-10 2.3E-15 78.4 5.3 88 19-108 2-96 (219)
102 COG3458 Acetyl esterase (deace 99.1 2.4E-10 5.1E-15 77.7 6.9 119 2-122 66-210 (321)
103 PF06028 DUF915: Alpha/beta hy 99.1 4.9E-10 1.1E-14 76.9 8.5 108 17-124 10-145 (255)
104 COG3571 Predicted hydrolase of 99.1 2.7E-09 5.8E-14 67.4 11.0 117 12-129 8-131 (213)
105 PF05448 AXE1: Acetyl xylan es 99.1 1.4E-09 3.1E-14 77.2 10.6 117 4-122 68-209 (320)
106 PF00151 Lipase: Lipase; Inte 99.1 6.3E-11 1.4E-15 84.3 3.8 110 15-125 68-190 (331)
107 PF00326 Peptidase_S9: Prolyl 99.1 6.8E-10 1.5E-14 74.5 8.1 93 34-126 3-103 (213)
108 PF03096 Ndr: Ndr family; Int 99.1 4.9E-09 1.1E-13 72.4 12.2 115 5-122 11-134 (283)
109 KOG2624 Triglyceride lipase-ch 99.1 6.9E-10 1.5E-14 80.4 8.3 122 2-125 58-202 (403)
110 PF05728 UPF0227: Uncharacteri 99.1 2.4E-09 5.1E-14 70.4 9.9 86 21-122 2-91 (187)
111 PF07224 Chlorophyllase: Chlor 99.1 1.1E-09 2.4E-14 74.2 8.4 110 12-122 40-157 (307)
112 PF05990 DUF900: Alpha/beta hy 99.1 2.9E-09 6.4E-14 72.5 10.2 107 16-122 16-137 (233)
113 PF07859 Abhydrolase_3: alpha/ 99.1 2.1E-09 4.6E-14 71.9 9.4 98 21-122 1-110 (211)
114 PF12715 Abhydrolase_7: Abhydr 99.0 2.2E-09 4.7E-14 76.7 9.3 105 15-120 112-258 (390)
115 PF05057 DUF676: Putative seri 99.0 1E-09 2.3E-14 73.9 7.4 89 17-107 3-98 (217)
116 KOG2931 Differentiation-relate 99.0 1.4E-08 2.9E-13 70.0 12.4 115 5-122 34-157 (326)
117 COG3509 LpqC Poly(3-hydroxybut 99.0 9.9E-09 2.2E-13 70.8 10.7 120 3-122 45-179 (312)
118 PLN02733 phosphatidylcholine-s 99.0 2.8E-09 6E-14 78.5 8.4 92 30-123 106-202 (440)
119 COG3545 Predicted esterase of 99.0 1.4E-08 3.1E-13 65.0 9.7 93 19-124 3-96 (181)
120 PRK10115 protease 2; Provision 99.0 2.8E-08 6.1E-13 77.2 13.0 123 2-124 426-561 (686)
121 PF03403 PAF-AH_p_II: Platelet 98.9 3.4E-09 7.4E-14 76.9 7.0 108 16-124 98-264 (379)
122 COG4099 Predicted peptidase [G 98.9 1.5E-08 3.2E-13 70.1 9.0 119 2-122 171-304 (387)
123 COG0657 Aes Esterase/lipase [L 98.9 6E-08 1.3E-12 68.8 12.1 114 5-122 64-191 (312)
124 PF06057 VirJ: Bacterial virul 98.9 1.1E-08 2.3E-13 66.8 7.0 98 19-122 3-107 (192)
125 KOG1553 Predicted alpha/beta h 98.9 1.3E-08 2.9E-13 71.7 7.9 103 17-122 242-345 (517)
126 KOG3724 Negative regulator of 98.9 2.8E-08 6.1E-13 76.2 9.7 109 16-128 87-226 (973)
127 TIGR01849 PHB_depoly_PhaZ poly 98.8 9.5E-08 2.1E-12 69.6 11.6 102 18-123 102-209 (406)
128 COG1075 LipA Predicted acetylt 98.8 1.8E-08 4E-13 72.1 7.4 102 18-123 59-165 (336)
129 smart00824 PKS_TE Thioesterase 98.8 7.8E-08 1.7E-12 63.7 9.7 98 23-124 2-104 (212)
130 COG4782 Uncharacterized protei 98.8 9.5E-08 2.1E-12 67.7 9.8 107 16-122 114-234 (377)
131 PF08538 DUF1749: Protein of u 98.8 1.1E-07 2.3E-12 66.5 9.4 108 17-128 32-154 (303)
132 PF00756 Esterase: Putative es 98.8 5.6E-08 1.2E-12 66.7 7.9 121 1-121 4-149 (251)
133 KOG1515 Arylacetamide deacetyl 98.7 7.8E-07 1.7E-11 63.5 13.4 111 16-130 88-215 (336)
134 PRK10439 enterobactin/ferric e 98.7 6.6E-07 1.4E-11 65.8 13.4 108 16-123 207-324 (411)
135 KOG3975 Uncharacterized conser 98.7 5.2E-07 1.1E-11 61.0 11.3 107 16-122 27-147 (301)
136 COG4814 Uncharacterized protei 98.7 3.9E-07 8.4E-12 61.7 10.4 106 18-123 45-177 (288)
137 COG4757 Predicted alpha/beta h 98.7 1.1E-07 2.3E-12 63.7 7.1 87 20-106 32-124 (281)
138 PF05677 DUF818: Chlamydia CHL 98.7 5E-07 1.1E-11 63.8 10.7 101 4-108 123-236 (365)
139 PF02273 Acyl_transf_2: Acyl t 98.7 6.4E-07 1.4E-11 60.5 10.8 117 2-122 12-134 (294)
140 KOG3847 Phospholipase A2 (plat 98.7 8.7E-08 1.9E-12 66.7 6.3 107 16-123 116-276 (399)
141 PF03959 FSH1: Serine hydrolas 98.6 1.2E-07 2.6E-12 63.7 6.8 106 17-124 3-147 (212)
142 PRK04940 hypothetical protein; 98.6 4.8E-07 1E-11 58.8 8.8 88 21-124 2-94 (180)
143 KOG2281 Dipeptidyl aminopeptid 98.6 3E-07 6.5E-12 69.5 8.7 106 16-121 640-761 (867)
144 PF09752 DUF2048: Uncharacteri 98.6 1.3E-06 2.7E-11 62.2 11.0 106 16-122 90-210 (348)
145 COG2272 PnbA Carboxylesterase 98.6 8.7E-07 1.9E-11 65.3 10.0 108 16-123 92-218 (491)
146 PLN02606 palmitoyl-protein thi 98.6 7.6E-07 1.6E-11 62.2 9.2 103 17-123 25-133 (306)
147 KOG4627 Kynurenine formamidase 98.5 6.1E-07 1.3E-11 59.2 7.4 104 16-122 65-172 (270)
148 COG4188 Predicted dienelactone 98.5 7E-07 1.5E-11 63.7 8.2 90 17-106 70-178 (365)
149 PF12048 DUF3530: Protein of u 98.5 9.4E-06 2E-10 57.7 13.8 113 14-126 83-233 (310)
150 cd00312 Esterase_lipase Estera 98.5 1.5E-06 3.4E-11 65.3 10.1 106 16-123 93-214 (493)
151 KOG3967 Uncharacterized conser 98.5 2.8E-06 6E-11 56.4 9.8 104 18-122 101-227 (297)
152 COG2936 Predicted acyl esteras 98.5 1.1E-06 2.4E-11 66.1 8.7 121 2-122 29-159 (563)
153 KOG2112 Lysophospholipase [Lip 98.5 9.4E-07 2E-11 58.2 7.1 106 18-123 3-129 (206)
154 PF02089 Palm_thioest: Palmito 98.4 3.5E-07 7.5E-12 63.3 4.8 106 17-123 4-117 (279)
155 COG3243 PhaC Poly(3-hydroxyalk 98.4 1E-06 2.2E-11 63.8 7.2 102 17-122 106-217 (445)
156 PF05577 Peptidase_S28: Serine 98.4 5E-06 1.1E-10 61.7 10.7 108 17-124 28-150 (434)
157 PTZ00472 serine carboxypeptida 98.4 5.1E-06 1.1E-10 62.1 10.6 120 3-122 61-216 (462)
158 PF10340 DUF2424: Protein of u 98.4 1.4E-05 3.1E-10 57.6 12.3 104 16-122 120-235 (374)
159 KOG3101 Esterase D [General fu 98.4 1.9E-07 4.2E-12 61.7 2.7 108 17-124 43-178 (283)
160 KOG2100 Dipeptidyl aminopeptid 98.4 5.7E-06 1.2E-10 65.2 10.5 123 3-125 508-647 (755)
161 PLN02633 palmitoyl protein thi 98.4 5.9E-06 1.3E-10 57.9 9.4 103 17-123 24-132 (314)
162 PF00135 COesterase: Carboxyle 98.4 7.6E-06 1.7E-10 61.9 10.7 107 17-123 124-246 (535)
163 PF02450 LCAT: Lecithin:choles 98.3 3.5E-06 7.7E-11 61.6 8.1 82 33-123 66-161 (389)
164 PRK05371 x-prolyl-dipeptidyl a 98.3 6.7E-06 1.5E-10 64.9 9.9 86 37-122 271-373 (767)
165 KOG2541 Palmitoyl protein thio 98.3 1.6E-05 3.5E-10 54.5 10.0 101 19-123 24-129 (296)
166 COG3150 Predicted esterase [Ge 98.2 1.6E-05 3.5E-10 50.8 8.2 88 21-122 2-91 (191)
167 KOG4840 Predicted hydrolases o 98.1 3.6E-05 7.9E-10 51.6 7.6 102 18-123 36-145 (299)
168 cd00741 Lipase Lipase. Lipase 98.0 2.6E-05 5.6E-10 49.7 6.3 39 85-123 26-68 (153)
169 KOG3043 Predicted hydrolase re 98.0 4.2E-05 9.2E-10 51.2 7.2 103 19-122 40-154 (242)
170 PF06259 Abhydrolase_8: Alpha/ 98.0 0.00062 1.3E-08 44.5 12.2 114 8-122 10-144 (177)
171 KOG2183 Prolylcarboxypeptidase 97.9 0.00021 4.5E-09 52.1 9.8 107 17-123 79-203 (492)
172 COG2819 Predicted hydrolase of 97.9 0.0005 1.1E-08 47.4 11.3 42 86-127 136-177 (264)
173 PF01764 Lipase_3: Lipase (cla 97.9 9.5E-05 2.1E-09 46.2 6.7 39 71-110 49-87 (140)
174 COG3946 VirJ Type IV secretory 97.8 0.00018 4E-09 52.1 8.4 88 17-110 259-349 (456)
175 COG0627 Predicted esterase [Ge 97.8 0.00012 2.5E-09 52.2 7.2 109 17-125 53-190 (316)
176 PF11144 DUF2920: Protein of u 97.8 0.00047 1E-08 50.3 10.2 35 87-121 184-218 (403)
177 PF11339 DUF3141: Protein of u 97.8 0.00053 1.2E-08 51.4 10.3 81 36-123 92-176 (581)
178 PF03583 LIP: Secretory lipase 97.8 0.00034 7.4E-09 49.4 8.8 82 38-121 19-112 (290)
179 PLN02517 phosphatidylcholine-s 97.7 0.00017 3.7E-09 54.9 7.0 89 33-123 157-264 (642)
180 PF11288 DUF3089: Protein of u 97.7 0.00021 4.6E-09 47.7 6.2 65 44-108 44-116 (207)
181 PF11187 DUF2974: Protein of u 97.6 0.00035 7.7E-09 47.4 7.1 53 73-127 72-128 (224)
182 PF01083 Cutinase: Cutinase; 97.6 0.0004 8.7E-09 45.5 7.2 53 71-124 66-124 (179)
183 PF08840 BAAT_C: BAAT / Acyl-C 97.6 0.00024 5.2E-09 47.9 6.1 51 72-123 5-57 (213)
184 KOG1202 Animal-type fatty acid 97.6 0.00078 1.7E-08 55.2 9.4 97 16-122 2121-2219(2376)
185 PF00450 Peptidase_S10: Serine 97.5 0.0019 4.1E-08 47.6 10.3 119 3-122 24-181 (415)
186 cd00519 Lipase_3 Lipase (class 97.5 0.00035 7.5E-09 47.5 5.9 24 86-109 127-150 (229)
187 KOG1516 Carboxylesterase and r 97.4 0.0014 3.1E-08 50.1 9.1 107 18-124 112-234 (545)
188 KOG2182 Hydrolytic enzymes of 97.4 0.0033 7.1E-08 47.0 10.2 108 16-123 84-208 (514)
189 KOG2551 Phospholipase/carboxyh 97.4 0.0022 4.8E-08 43.0 8.5 105 17-124 4-149 (230)
190 PF05576 Peptidase_S37: PS-10 97.2 0.0013 2.8E-08 48.1 6.3 106 16-123 61-170 (448)
191 PF07082 DUF1350: Protein of u 97.2 0.0009 1.9E-08 45.8 5.2 98 18-121 17-124 (250)
192 PLN02162 triacylglycerol lipas 97.2 0.0011 2.4E-08 49.3 5.9 35 71-106 263-297 (475)
193 KOG2369 Lecithin:cholesterol a 97.2 0.00057 1.2E-08 50.5 4.5 84 33-122 125-225 (473)
194 PLN00413 triacylglycerol lipas 97.2 0.0012 2.7E-08 49.1 6.2 51 71-122 269-327 (479)
195 COG4947 Uncharacterized protei 97.1 0.0016 3.5E-08 42.1 5.3 102 17-122 25-136 (227)
196 PLN02408 phospholipase A1 97.1 0.0018 3.8E-08 47.0 5.7 38 72-109 184-222 (365)
197 PLN02454 triacylglycerol lipas 97.0 0.0025 5.4E-08 46.9 6.1 34 75-108 215-249 (414)
198 PF05277 DUF726: Protein of un 97.0 0.0021 4.6E-08 46.3 5.5 39 85-123 218-261 (345)
199 COG1770 PtrB Protease II [Amin 96.9 0.0065 1.4E-07 46.9 7.9 108 15-122 445-562 (682)
200 COG2382 Fes Enterochelin ester 96.9 0.0052 1.1E-07 43.2 6.8 40 86-125 176-215 (299)
201 PLN02571 triacylglycerol lipas 96.9 0.0021 4.6E-08 47.3 4.9 39 70-108 208-247 (413)
202 PLN02310 triacylglycerol lipas 96.8 0.0042 9.2E-08 45.6 5.7 38 71-108 190-230 (405)
203 PLN02934 triacylglycerol lipas 96.7 0.005 1.1E-07 46.4 5.8 35 71-106 306-340 (515)
204 PF04301 DUF452: Protein of un 96.7 0.012 2.6E-07 39.7 7.1 81 17-123 10-91 (213)
205 PLN02802 triacylglycerol lipas 96.7 0.0049 1.1E-07 46.4 5.6 37 72-108 314-351 (509)
206 PLN03037 lipase class 3 family 96.7 0.0052 1.1E-07 46.4 5.5 38 71-108 299-339 (525)
207 PLN02324 triacylglycerol lipas 96.7 0.0039 8.4E-08 45.9 4.7 37 72-108 199-236 (415)
208 KOG2237 Predicted serine prote 96.6 0.0058 1.3E-07 47.1 5.7 107 16-122 468-584 (712)
209 PLN02209 serine carboxypeptida 96.5 0.055 1.2E-06 40.6 9.8 119 4-122 53-212 (437)
210 KOG4372 Predicted alpha/beta h 96.5 0.0067 1.5E-07 44.3 4.8 88 17-106 79-169 (405)
211 PF08237 PE-PPE: PE-PPE domain 96.5 0.05 1.1E-06 37.1 8.8 79 45-123 2-90 (225)
212 PF05705 DUF829: Eukaryotic pr 96.4 0.047 1E-06 37.3 8.8 99 20-122 2-112 (240)
213 PF04083 Abhydro_lipase: Parti 96.4 0.0075 1.6E-07 32.5 3.7 34 2-35 22-60 (63)
214 PLN03016 sinapoylglucose-malat 96.4 0.043 9.4E-07 41.1 8.7 120 3-122 50-210 (433)
215 COG2939 Carboxypeptidase C (ca 96.3 0.067 1.5E-06 40.3 9.5 112 15-126 98-240 (498)
216 PLN02753 triacylglycerol lipas 96.2 0.0087 1.9E-07 45.3 4.5 36 72-107 293-332 (531)
217 KOG1282 Serine carboxypeptidas 96.2 0.072 1.6E-06 40.0 9.0 120 2-122 56-213 (454)
218 PLN02719 triacylglycerol lipas 96.0 0.014 3.1E-07 44.0 4.6 37 72-108 279-319 (518)
219 PLN02761 lipase class 3 family 95.9 0.016 3.6E-07 43.8 4.5 36 72-107 274-314 (527)
220 PF07519 Tannase: Tannase and 95.5 0.022 4.8E-07 43.1 4.1 85 37-123 52-151 (474)
221 COG1505 Serine proteases of th 95.3 0.027 5.9E-07 43.3 4.0 119 2-122 404-535 (648)
222 KOG4569 Predicted lipase [Lipi 95.2 0.038 8.2E-07 40.0 4.5 37 71-108 156-192 (336)
223 KOG4388 Hormone-sensitive lipa 95.2 0.19 4.1E-06 38.9 8.2 112 7-122 385-508 (880)
224 KOG3253 Predicted alpha/beta h 95.2 0.057 1.2E-06 41.7 5.4 100 17-123 175-287 (784)
225 PLN02847 triacylglycerol lipas 95.2 0.046 1E-06 42.2 5.0 23 86-108 250-272 (633)
226 KOG2385 Uncharacterized conser 95.2 0.047 1E-06 41.3 4.7 44 81-124 441-489 (633)
227 PLN02213 sinapoylglucose-malat 94.8 0.28 6E-06 35.3 7.9 76 47-122 3-96 (319)
228 KOG2029 Uncharacterized conser 94.7 0.11 2.4E-06 40.1 5.7 52 71-122 505-572 (697)
229 TIGR03712 acc_sec_asp2 accesso 93.8 0.35 7.6E-06 36.6 6.7 108 8-120 279-388 (511)
230 PF09994 DUF2235: Uncharacteri 93.8 1.4 3.1E-05 31.0 9.6 90 19-108 2-113 (277)
231 KOG4540 Putative lipase essent 93.8 0.11 2.4E-06 36.7 3.8 36 74-109 263-298 (425)
232 COG5153 CVT17 Putative lipase 93.8 0.11 2.4E-06 36.7 3.8 36 74-109 263-298 (425)
233 PRK12467 peptide synthase; Pro 93.6 1.5 3.2E-05 41.9 11.4 98 19-120 3693-3793(3956)
234 KOG1551 Uncharacterized conser 93.3 0.31 6.8E-06 34.1 5.3 83 38-120 134-228 (371)
235 KOG2521 Uncharacterized conser 92.8 1.8 4E-05 31.6 8.9 104 19-122 40-152 (350)
236 KOG1283 Serine carboxypeptidas 92.5 1 2.2E-05 32.6 7.0 95 16-112 29-147 (414)
237 COG0529 CysC Adenylylsulfate k 92.1 2.3 5E-05 28.1 7.9 74 16-92 20-100 (197)
238 COG4553 DepA Poly-beta-hydroxy 91.7 3 6.4E-05 29.9 8.5 104 17-124 102-211 (415)
239 PF09949 DUF2183: Uncharacteri 90.9 2.1 4.6E-05 25.3 7.5 81 36-117 15-97 (100)
240 PF06441 EHN: Epoxide hydrolas 90.2 0.31 6.7E-06 29.5 2.4 23 15-37 89-111 (112)
241 COG3673 Uncharacterized conser 89.5 6.5 0.00014 28.7 9.3 91 17-107 30-142 (423)
242 PF06309 Torsin: Torsin; Inte 89.5 1.9 4.2E-05 26.7 5.5 31 15-45 49-81 (127)
243 COG2830 Uncharacterized protei 88.9 1.6 3.4E-05 28.4 4.9 80 19-123 12-91 (214)
244 PF00326 Peptidase_S9: Prolyl 88.3 1.8 3.8E-05 28.8 5.3 64 17-83 143-209 (213)
245 PF10081 Abhydrolase_9: Alpha/ 87.8 7.9 0.00017 27.5 8.5 52 71-122 91-147 (289)
246 COG1506 DAP2 Dipeptidyl aminop 84.7 6.3 0.00014 31.2 7.3 64 16-82 549-615 (620)
247 PF06792 UPF0261: Uncharacteri 83.9 16 0.00035 27.4 8.7 97 20-116 3-124 (403)
248 PF01583 APS_kinase: Adenylyls 80.1 9.2 0.0002 24.6 5.6 75 18-92 1-79 (156)
249 COG1073 Hydrolases of the alph 79.4 10 0.00023 26.0 6.2 37 17-53 48-84 (299)
250 COG3933 Transcriptional antite 79.0 18 0.0004 27.5 7.4 72 19-103 110-181 (470)
251 cd01714 ETF_beta The electron 78.2 18 0.00038 24.3 7.4 41 67-109 91-135 (202)
252 COG2240 PdxK Pyridoxal/pyridox 77.6 9.2 0.0002 27.2 5.3 96 24-127 11-118 (281)
253 KOG4389 Acetylcholinesterase/B 77.2 18 0.00038 28.1 6.9 107 15-123 132-256 (601)
254 PF14253 AbiH: Bacteriophage a 75.5 3.6 7.7E-05 28.6 3.0 22 78-99 226-247 (270)
255 PF03283 PAE: Pectinacetyleste 75.1 12 0.00025 27.7 5.6 31 76-106 144-175 (361)
256 TIGR00521 coaBC_dfp phosphopan 73.7 35 0.00077 25.5 8.8 74 19-94 113-193 (390)
257 COG1448 TyrB Aspartate/tyrosin 73.0 37 0.0008 25.4 9.5 86 18-120 171-263 (396)
258 PRK05579 bifunctional phosphop 72.2 39 0.00085 25.4 9.0 75 18-94 116-196 (399)
259 PF03610 EIIA-man: PTS system 72.1 19 0.0004 21.6 8.2 77 20-108 2-79 (116)
260 KOG0781 Signal recognition par 71.3 35 0.00075 26.5 7.2 76 23-108 443-519 (587)
261 PF04084 ORC2: Origin recognit 70.8 37 0.0008 24.8 7.2 79 22-100 57-150 (326)
262 COG1282 PntB NAD/NADP transhyd 68.6 32 0.0007 25.6 6.4 77 17-93 307-391 (463)
263 PRK09444 pntB pyridine nucleot 67.6 27 0.00059 26.7 6.1 75 19-93 307-389 (462)
264 PF08433 KTI12: Chromatin asso 67.1 17 0.00038 25.6 4.9 73 20-92 2-76 (270)
265 cd00006 PTS_IIA_man PTS_IIA, P 66.3 27 0.00058 21.2 7.6 71 20-102 3-73 (122)
266 KOG2170 ATPase of the AAA+ sup 65.0 16 0.00035 26.4 4.3 30 16-45 107-138 (344)
267 KOG0736 Peroxisome assembly fa 64.5 40 0.00087 27.9 6.7 82 37-122 756-844 (953)
268 COG4822 CbiK Cobalamin biosynt 64.2 41 0.00089 23.1 5.8 42 15-56 135-178 (265)
269 COG0218 Predicted GTPase [Gene 63.4 15 0.00032 24.8 3.7 34 48-84 72-105 (200)
270 smart00827 PKS_AT Acyl transfe 62.6 14 0.0003 26.0 3.8 28 78-106 74-101 (298)
271 PF00448 SRP54: SRP54-type pro 62.3 44 0.00095 22.3 8.1 70 39-118 77-148 (196)
272 PF02230 Abhydrolase_2: Phosph 61.9 21 0.00045 23.9 4.4 42 18-59 155-199 (216)
273 TIGR02764 spore_ybaN_pdaB poly 60.7 9.5 0.0002 25.1 2.5 34 19-52 152-188 (191)
274 TIGR03131 malonate_mdcH malona 60.1 17 0.00036 25.7 3.8 28 78-106 68-95 (295)
275 cd07198 Patatin Patatin-like p 60.0 18 0.00038 23.4 3.7 24 86-109 25-48 (172)
276 PRK06490 glutamine amidotransf 58.5 59 0.0013 22.5 8.9 35 70-105 69-103 (239)
277 PF00698 Acyl_transf_1: Acyl t 57.8 9.9 0.00021 27.3 2.4 29 77-106 75-103 (318)
278 TIGR00128 fabD malonyl CoA-acy 57.7 19 0.0004 25.2 3.7 21 86-106 82-102 (290)
279 PF14606 Lipase_GDSL_3: GDSL-l 57.3 54 0.0012 21.7 5.9 58 26-93 40-100 (178)
280 TIGR02873 spore_ylxY probable 57.0 14 0.0003 26.0 2.9 34 19-52 231-264 (268)
281 PRK11460 putative hydrolase; P 56.5 48 0.001 22.6 5.5 43 17-59 147-192 (232)
282 PF12242 Eno-Rase_NADH_b: NAD( 56.4 32 0.00068 19.4 3.6 24 85-108 38-61 (78)
283 PRK10279 hypothetical protein; 55.1 23 0.0005 25.4 3.8 31 77-108 24-54 (300)
284 PF10561 UPF0565: Uncharacteri 54.2 15 0.00032 26.5 2.7 37 87-123 193-245 (303)
285 TIGR02884 spore_pdaA delta-lac 54.1 20 0.00044 24.4 3.3 34 19-52 187-221 (224)
286 cd07225 Pat_PNPLA6_PNPLA7 Pata 53.4 24 0.00053 25.4 3.7 31 76-107 33-63 (306)
287 PRK06731 flhF flagellar biosyn 52.9 80 0.0017 22.4 8.3 65 44-117 153-218 (270)
288 cd07230 Pat_TGL4-5_like Triacy 51.9 16 0.00035 27.6 2.7 26 87-112 101-126 (421)
289 cd07207 Pat_ExoU_VipD_like Exo 51.5 29 0.00063 22.7 3.7 23 86-108 26-48 (194)
290 PF03808 Glyco_tran_WecB: Glyc 51.5 65 0.0014 20.9 5.4 27 71-99 88-114 (172)
291 cd07227 Pat_Fungal_NTE1 Fungal 49.4 34 0.00074 24.2 3.9 31 76-107 28-58 (269)
292 PF14359 DUF4406: Domain of un 49.3 51 0.0011 19.1 6.1 68 32-109 16-86 (92)
293 PHA02114 hypothetical protein 49.2 36 0.00078 20.1 3.3 34 19-52 83-116 (127)
294 PF08484 Methyltransf_14: C-me 49.1 45 0.00098 21.5 4.1 45 70-114 51-96 (160)
295 COG1752 RssA Predicted esteras 49.1 32 0.0007 24.6 3.8 31 77-108 30-60 (306)
296 cd07210 Pat_hypo_W_succinogene 48.8 37 0.00081 23.1 3.9 22 87-108 28-49 (221)
297 PRK02399 hypothetical protein; 48.7 1.2E+02 0.0026 23.1 10.5 96 20-116 5-126 (406)
298 cd07232 Pat_PLPL Patain-like p 48.6 21 0.00045 26.9 2.8 30 86-115 94-123 (407)
299 cd03818 GT1_ExpC_like This fam 48.5 60 0.0013 23.9 5.3 35 21-57 2-36 (396)
300 TIGR03709 PPK2_rel_1 polyphosp 48.2 94 0.002 22.0 5.8 70 17-98 54-125 (264)
301 COG1926 Predicted phosphoribos 48.1 80 0.0017 21.6 5.2 48 69-116 7-55 (220)
302 TIGR02069 cyanophycinase cyano 47.5 65 0.0014 22.5 5.0 39 16-54 26-66 (250)
303 cd07231 Pat_SDP1-like Sugar-De 47.5 23 0.00049 25.8 2.8 24 86-109 95-118 (323)
304 PF13207 AAA_17: AAA domain; P 46.6 60 0.0013 19.1 5.0 31 21-53 1-32 (121)
305 COG3727 Vsr DNA G:T-mismatch r 46.1 75 0.0016 20.0 5.1 14 38-51 101-114 (150)
306 PF10142 PhoPQ_related: PhoPQ- 45.1 51 0.0011 24.6 4.3 47 75-122 158-206 (367)
307 PRK05665 amidotransferase; Pro 44.8 43 0.00093 23.2 3.8 37 68-105 72-108 (240)
308 cd07229 Pat_TGL3_like Triacylg 44.6 27 0.00058 26.2 2.9 30 86-115 110-139 (391)
309 cd01535 4RHOD_Repeat_4 Member 44.3 80 0.0017 19.9 6.4 58 44-105 8-66 (145)
310 PF03853 YjeF_N: YjeF-related 44.2 39 0.00085 21.9 3.4 35 17-51 24-58 (169)
311 cd07209 Pat_hypo_Ecoli_Z1214_l 43.5 45 0.00097 22.5 3.7 30 79-109 19-48 (215)
312 cd07228 Pat_NTE_like_bacteria 43.1 56 0.0012 21.1 4.0 23 87-109 28-50 (175)
313 TIGR01361 DAHP_synth_Bsub phos 43.0 1.2E+02 0.0025 21.4 8.4 75 17-97 131-206 (260)
314 COG0541 Ffh Signal recognition 42.8 1.5E+02 0.0034 22.8 8.0 48 70-118 198-247 (451)
315 PF03681 UPF0150: Uncharacteri 42.1 24 0.00052 17.4 1.7 33 44-82 12-44 (48)
316 KOG2872 Uroporphyrinogen decar 42.0 1.3E+02 0.0029 21.8 5.9 70 19-95 253-336 (359)
317 KOG3062 RNA polymerase II elon 41.9 1.2E+02 0.0026 21.3 7.7 73 20-92 2-79 (281)
318 PRK13938 phosphoheptose isomer 41.6 85 0.0018 21.0 4.7 29 81-109 40-68 (196)
319 TIGR03707 PPK2_P_aer polyphosp 41.4 1.2E+02 0.0026 21.0 6.1 72 17-100 29-102 (230)
320 PF00070 Pyr_redox: Pyridine n 40.9 62 0.0013 17.6 4.1 30 88-120 1-30 (80)
321 PF03490 Varsurf_PPLC: Variant 40.8 36 0.00078 17.3 2.1 26 67-93 6-31 (51)
322 PF03033 Glyco_transf_28: Glyc 40.8 26 0.00056 21.3 2.1 34 21-54 2-35 (139)
323 PF02233 PNTB: NAD(P) transhyd 40.2 19 0.00041 27.6 1.5 41 19-59 308-352 (463)
324 cd07212 Pat_PNPLA9 Patatin-lik 39.9 30 0.00064 25.0 2.5 19 90-108 35-53 (312)
325 TIGR03127 RuMP_HxlB 6-phospho 39.7 73 0.0016 20.6 4.1 33 76-108 20-52 (179)
326 PRK09936 hypothetical protein; 39.5 1.4E+02 0.0031 21.5 5.6 55 23-82 25-83 (296)
327 cd05007 SIS_Etherase N-acetylm 39.4 77 0.0017 22.2 4.4 39 71-109 34-72 (257)
328 COG0331 FabD (acyl-carrier-pro 38.7 46 0.00099 24.1 3.2 22 85-106 83-104 (310)
329 COG1737 RpiR Transcriptional r 38.3 1.1E+02 0.0023 21.8 5.0 35 76-110 120-154 (281)
330 cd07208 Pat_hypo_Ecoli_yjju_li 37.6 36 0.00079 23.7 2.6 22 88-109 28-49 (266)
331 PRK04148 hypothetical protein; 37.4 98 0.0021 19.4 4.2 21 86-106 17-37 (134)
332 PF09370 TIM-br_sig_trns: TIM- 37.0 78 0.0017 22.5 4.0 63 37-101 162-225 (268)
333 cd07205 Pat_PNPLA6_PNPLA7_NTE1 36.6 90 0.002 20.0 4.2 22 87-108 28-49 (175)
334 PRK14194 bifunctional 5,10-met 36.1 69 0.0015 23.2 3.8 34 74-107 144-182 (301)
335 PRK14581 hmsF outer membrane N 36.0 1.7E+02 0.0036 24.0 6.1 79 16-94 46-142 (672)
336 cd05005 SIS_PHI Hexulose-6-pho 35.9 1.2E+02 0.0026 19.6 5.0 33 76-108 23-55 (179)
337 COG0299 PurN Folate-dependent 35.3 1.4E+02 0.0031 20.2 6.7 27 67-94 62-88 (200)
338 PRK07053 glutamine amidotransf 34.9 1.5E+02 0.0033 20.4 8.2 34 71-105 67-100 (234)
339 COG1092 Predicted SAM-dependen 34.7 1.8E+02 0.0039 22.0 5.8 57 37-97 280-339 (393)
340 PRK05441 murQ N-acetylmuramic 34.3 97 0.0021 22.3 4.3 34 74-107 50-83 (299)
341 PF04244 DPRP: Deoxyribodipyri 34.0 1.4E+02 0.0031 20.5 4.9 48 34-92 51-98 (224)
342 TIGR01425 SRP54_euk signal rec 33.7 2.2E+02 0.0048 21.9 7.6 64 44-117 181-246 (429)
343 PF06415 iPGM_N: BPG-independe 33.7 1.6E+02 0.0035 20.3 5.4 64 26-94 40-104 (223)
344 COG3887 Predicted signaling pr 33.4 1E+02 0.0022 24.7 4.5 101 17-121 257-377 (655)
345 COG0813 DeoD Purine-nucleoside 33.3 66 0.0014 22.2 3.1 36 86-121 55-92 (236)
346 PF14488 DUF4434: Domain of un 33.2 1.4E+02 0.003 19.4 5.8 55 30-84 18-78 (166)
347 PRK11889 flhF flagellar biosyn 33.2 2.3E+02 0.0049 21.9 7.8 64 45-117 320-384 (436)
348 cd07206 Pat_TGL3-4-5_SDP1 Tria 33.1 82 0.0018 22.8 3.8 21 87-107 97-117 (298)
349 PRK05282 (alpha)-aspartyl dipe 32.5 1.7E+02 0.0037 20.3 7.0 88 17-105 30-130 (233)
350 TIGR01019 sucCoAalpha succinyl 32.4 1.9E+02 0.0041 20.8 6.5 89 18-120 89-178 (286)
351 COG1598 Predicted nuclease of 32.4 91 0.002 17.1 3.4 33 42-80 12-44 (73)
352 PRK03482 phosphoglycerate muta 32.3 1.6E+02 0.0034 19.7 5.9 36 67-104 120-158 (215)
353 PF01734 Patatin: Patatin-like 32.3 52 0.0011 20.8 2.6 21 87-107 27-47 (204)
354 COG0859 RfaF ADP-heptose:LPS h 32.0 1E+02 0.0022 22.4 4.2 35 18-52 175-215 (334)
355 KOG3086 Predicted dioxygenase 32.0 1.7E+02 0.0037 20.7 4.9 56 67-122 17-79 (296)
356 TIGR03586 PseI pseudaminic aci 31.8 2.1E+02 0.0045 21.0 8.0 79 17-106 133-213 (327)
357 PF07302 AroM: AroM protein; 31.4 1.5E+02 0.0032 20.5 4.6 40 18-57 151-190 (221)
358 PRK12570 N-acetylmuramic acid- 31.3 1.6E+02 0.0034 21.2 4.9 33 76-108 48-80 (296)
359 PF00091 Tubulin: Tubulin/FtsZ 31.2 1.2E+02 0.0027 20.4 4.3 23 76-99 114-136 (216)
360 PF13580 SIS_2: SIS domain; PD 30.9 1.3E+02 0.0029 18.5 4.5 33 78-110 27-59 (138)
361 cd07224 Pat_like Patatin-like 30.8 1E+02 0.0022 21.2 3.8 22 88-109 30-51 (233)
362 PF02882 THF_DHG_CYH_C: Tetrah 30.6 1.4E+02 0.0031 19.3 4.3 34 74-107 21-59 (160)
363 PLN03050 pyridoxine (pyridoxam 30.4 1.5E+02 0.0032 20.7 4.6 34 19-52 61-94 (246)
364 PF01656 CbiA: CobQ/CobB/MinD/ 30.2 1.3E+02 0.0028 19.3 4.2 35 22-56 2-38 (195)
365 TIGR02816 pfaB_fam PfaB family 30.1 84 0.0018 24.8 3.6 23 86-108 264-286 (538)
366 cd03146 GAT1_Peptidase_E Type 30.0 1.8E+02 0.0038 19.6 6.4 87 16-104 29-130 (212)
367 PRK12595 bifunctional 3-deoxy- 29.8 2.4E+02 0.0051 21.0 8.2 75 17-97 224-299 (360)
368 PF04763 DUF562: Protein of un 29.6 1.5E+02 0.0032 18.8 4.0 39 16-54 15-60 (146)
369 COG2201 CheB Chemotaxis respon 29.6 1.1E+02 0.0024 22.7 4.0 36 87-122 157-193 (350)
370 PRK13936 phosphoheptose isomer 29.6 1.5E+02 0.0033 19.7 4.5 30 80-109 37-66 (197)
371 PRK13397 3-deoxy-7-phosphohept 29.3 2.1E+02 0.0045 20.2 8.0 41 16-56 120-160 (250)
372 PLN02752 [acyl-carrier protein 29.3 46 0.001 24.2 2.1 18 89-106 126-143 (343)
373 PF01075 Glyco_transf_9: Glyco 29.2 83 0.0018 21.3 3.3 36 17-52 104-144 (247)
374 PF08496 Peptidase_S49_N: Pept 29.2 1.5E+02 0.0033 19.1 4.2 49 45-100 97-145 (155)
375 PRK02090 phosphoadenosine phos 28.8 1.9E+02 0.0042 19.9 5.0 43 75-121 31-75 (241)
376 PRK11613 folP dihydropteroate 28.6 2.2E+02 0.0049 20.4 7.7 51 38-97 169-221 (282)
377 PLN02735 carbamoyl-phosphate s 28.5 4.1E+02 0.0088 23.3 9.0 70 36-109 599-670 (1102)
378 PRK09754 phenylpropionate diox 28.5 2.4E+02 0.0052 20.9 5.7 38 79-119 137-174 (396)
379 PF13289 SIR2_2: SIR2-like dom 28.5 76 0.0016 19.3 2.8 24 76-99 76-99 (143)
380 TIGR03569 NeuB_NnaB N-acetylne 28.4 2.4E+02 0.0053 20.7 7.4 80 17-106 132-214 (329)
381 PLN02347 GMP synthetase 28.3 2.4E+02 0.0053 22.3 5.8 55 67-122 209-267 (536)
382 cd07211 Pat_PNPLA8 Patatin-lik 28.2 56 0.0012 23.4 2.3 17 90-106 44-60 (308)
383 PF14987 NADHdh_A3: NADH dehyd 27.9 1E+02 0.0022 17.4 2.8 29 73-101 2-30 (84)
384 PRK11557 putative DNA-binding 27.8 1.6E+02 0.0034 20.6 4.5 34 76-109 118-151 (278)
385 cd01520 RHOD_YbbB Member of th 27.7 1.4E+02 0.003 18.1 3.8 34 16-52 85-118 (128)
386 PRK10964 ADP-heptose:LPS hepto 27.5 1.5E+02 0.0032 21.3 4.4 33 18-50 178-215 (322)
387 cd04951 GT1_WbdM_like This fam 27.4 2.3E+02 0.0049 20.0 8.3 36 20-55 2-39 (360)
388 PF01118 Semialdhyde_dh: Semia 27.3 68 0.0015 19.3 2.3 31 88-119 1-32 (121)
389 PRK14046 malate--CoA ligase su 27.2 50 0.0011 24.8 2.0 32 86-117 118-149 (392)
390 PRK04965 NADH:flavorubredoxin 27.1 2.6E+02 0.0056 20.6 6.0 37 81-120 136-172 (377)
391 PRK00414 gmhA phosphoheptose i 27.1 1.9E+02 0.0041 19.2 4.5 25 84-108 42-66 (192)
392 PRK13685 hypothetical protein; 27.1 2.5E+02 0.0054 20.4 5.9 50 48-99 92-141 (326)
393 PRK06193 hypothetical protein; 27.0 1.2E+02 0.0026 20.6 3.6 30 68-97 136-166 (206)
394 PF02540 NAD_synthase: NAD syn 26.9 2.2E+02 0.0048 19.8 5.9 47 70-118 3-53 (242)
395 PRK14974 cell division protein 26.7 2.6E+02 0.0057 20.6 8.1 64 44-117 221-286 (336)
396 cd05009 SIS_GlmS_GlmD_2 SIS (S 26.7 1.1E+02 0.0024 18.8 3.3 33 77-109 4-36 (153)
397 cd01406 SIR2-like Sir2-like: P 26.7 98 0.0021 21.2 3.2 46 76-121 169-219 (242)
398 cd07213 Pat17_PNPLA8_PNPLA9_li 26.5 69 0.0015 22.7 2.5 19 90-108 37-55 (288)
399 COG4075 Uncharacterized conser 26.5 1.5E+02 0.0032 17.6 4.9 53 36-93 18-71 (110)
400 COG3007 Uncharacterized paraqu 26.4 97 0.0021 22.6 3.1 25 85-109 40-64 (398)
401 cd00842 MPP_ASMase acid sphing 26.0 2E+02 0.0043 20.3 4.8 27 68-94 194-221 (296)
402 cd07217 Pat17_PNPLA8_PNPLA9_li 25.8 71 0.0015 23.5 2.5 18 90-107 44-61 (344)
403 PRK13937 phosphoheptose isomer 25.8 2E+02 0.0044 18.9 4.6 33 74-106 26-58 (188)
404 PRK07313 phosphopantothenoylcy 25.7 2E+02 0.0044 18.9 6.6 60 18-80 113-178 (182)
405 PRK13398 3-deoxy-7-phosphohept 25.6 2.5E+02 0.0054 19.9 8.9 102 17-127 133-240 (266)
406 PTZ00445 p36-lilke protein; Pr 25.3 2.3E+02 0.0051 19.5 5.0 89 35-123 32-144 (219)
407 PRK13982 bifunctional SbtC-lik 24.9 3.4E+02 0.0074 21.2 9.7 62 18-81 180-247 (475)
408 cd01080 NAD_bind_m-THF_DH_Cycl 24.8 1.4E+02 0.0029 19.5 3.4 37 70-107 29-66 (168)
409 COG4850 Uncharacterized conser 24.6 3E+02 0.0065 20.5 5.6 48 71-119 263-312 (373)
410 cd03784 GT1_Gtf_like This fami 24.5 1.4E+02 0.0031 21.9 4.0 35 20-54 3-37 (401)
411 PRK13512 coenzyme A disulfide 24.5 1.9E+02 0.0042 21.8 4.7 42 75-120 138-179 (438)
412 cd07204 Pat_PNPLA_like Patatin 24.4 87 0.0019 21.7 2.6 20 90-109 34-53 (243)
413 cd01819 Patatin_and_cPLA2 Pata 24.4 1.6E+02 0.0035 18.6 3.7 19 87-105 28-46 (155)
414 PF13714 PEP_mutase: Phosphoen 24.4 2.5E+02 0.0054 19.5 6.3 73 19-95 71-144 (238)
415 PF05724 TPMT: Thiopurine S-me 24.4 1.6E+02 0.0035 20.0 3.9 31 19-54 38-68 (218)
416 PF04548 AIG1: AIG1 family; I 24.3 1.9E+02 0.0041 19.4 4.2 48 44-97 47-94 (212)
417 PLN02925 4-hydroxy-3-methylbut 24.0 2.7E+02 0.006 23.0 5.4 40 47-93 631-670 (733)
418 cd06533 Glyco_transf_WecG_TagA 23.9 2.1E+02 0.0046 18.5 5.8 42 76-121 91-134 (171)
419 TIGR01285 nifN nitrogenase mol 23.7 3E+02 0.0064 21.0 5.5 68 34-104 323-390 (432)
420 COG0743 Dxr 1-deoxy-D-xylulose 23.7 1.3E+02 0.0029 22.5 3.5 20 87-106 26-45 (385)
421 TIGR00632 vsr DNA mismatch end 23.6 1.9E+02 0.004 17.8 3.7 14 38-51 100-113 (117)
422 cd07222 Pat_PNPLA4 Patatin-lik 23.4 91 0.002 21.6 2.6 17 90-106 34-50 (246)
423 TIGR00824 EIIA-man PTS system, 23.3 1.8E+02 0.0039 17.5 8.1 73 20-104 4-76 (116)
424 PRK10886 DnaA initiator-associ 23.2 2.4E+02 0.0052 18.9 4.7 25 84-108 39-63 (196)
425 cd04962 GT1_like_5 This family 23.1 2E+02 0.0044 20.5 4.5 33 21-53 5-37 (371)
426 PRK02048 4-hydroxy-3-methylbut 22.9 1.7E+02 0.0037 23.5 4.1 39 48-93 516-554 (611)
427 COG4667 Predicted esterase of 22.9 59 0.0013 23.2 1.5 25 90-114 43-67 (292)
428 PF04816 DUF633: Family of unk 22.5 2.6E+02 0.0055 18.9 5.1 24 87-112 68-91 (205)
429 PF13200 DUF4015: Putative gly 22.3 1.8E+02 0.0039 21.3 3.9 34 22-55 2-36 (316)
430 TIGR02193 heptsyl_trn_I lipopo 22.2 2E+02 0.0044 20.4 4.3 35 17-51 178-217 (319)
431 cd03145 GAT1_cyanophycinase Ty 22.2 2.6E+02 0.0056 18.9 4.7 18 87-104 116-133 (217)
432 PF10686 DUF2493: Protein of u 22.1 1.2E+02 0.0027 16.5 2.5 11 18-28 31-41 (71)
433 PF01494 FAD_binding_3: FAD bi 22.0 1E+02 0.0022 21.9 2.7 22 88-109 3-24 (356)
434 COG2876 AroA 3-deoxy-D-arabino 21.9 3.1E+02 0.0067 19.7 5.7 42 15-56 149-190 (286)
435 TIGR03708 poly_P_AMP_trns poly 21.9 4E+02 0.0087 21.0 6.3 71 17-99 38-110 (493)
436 PRK09065 glutamine amidotransf 21.8 1.3E+02 0.0028 20.7 3.1 36 70-106 71-106 (237)
437 cd07218 Pat_iPLA2 Calcium-inde 21.8 97 0.0021 21.6 2.5 19 91-109 34-52 (245)
438 cd00382 beta_CA Carbonic anhyd 21.6 1.7E+02 0.0036 17.7 3.2 30 71-101 44-73 (119)
439 cd01410 SIRT7 SIRT7: Eukaryoti 21.4 2.4E+02 0.0051 19.0 4.2 42 80-121 150-191 (206)
440 PF12112 DUF3579: Protein of u 21.4 60 0.0013 19.0 1.1 34 18-52 4-39 (92)
441 cd05006 SIS_GmhA Phosphoheptos 21.4 2.4E+02 0.0052 18.2 4.7 23 86-108 33-55 (177)
442 TIGR02113 coaC_strep phosphopa 21.4 2.5E+02 0.0055 18.4 6.2 36 18-53 112-150 (177)
443 cd01820 PAF_acetylesterase_lik 21.4 1.7E+02 0.0036 19.4 3.5 28 68-95 13-41 (214)
444 PLN03058 dynein light chain ty 21.3 40 0.00087 21.0 0.4 34 70-103 69-102 (128)
445 KOG2214 Predicted esterase of 21.0 59 0.0013 25.4 1.3 30 86-115 201-230 (543)
446 PRK15416 lipopolysaccharide co 20.6 1.4E+02 0.003 20.2 2.9 23 76-99 142-164 (201)
447 PF03976 PPK2: Polyphosphate k 20.6 81 0.0018 21.7 1.9 69 18-98 30-100 (228)
448 KOG4153 Fructose 1,6-bisphosph 20.5 2.8E+02 0.006 19.9 4.4 18 15-32 254-271 (358)
449 COG3675 Predicted lipase [Lipi 20.5 91 0.002 22.6 2.1 32 75-106 163-194 (332)
450 PF07992 Pyr_redox_2: Pyridine 20.5 95 0.0021 20.0 2.2 28 88-118 1-28 (201)
451 PRK15482 transcriptional regul 20.4 2.5E+02 0.0054 19.8 4.4 34 76-109 125-158 (285)
452 cd03816 GT1_ALG1_like This fam 20.1 3.5E+02 0.0075 20.2 5.3 39 18-56 4-42 (415)
453 PF11713 Peptidase_C80: Peptid 20.1 79 0.0017 20.4 1.6 35 65-99 75-116 (157)
454 cd07199 Pat17_PNPLA8_PNPLA9_li 20.1 94 0.002 21.5 2.1 18 90-107 37-54 (258)
455 PRK00726 murG undecaprenyldiph 20.0 1.5E+02 0.0033 21.3 3.3 35 20-54 4-38 (357)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.90 E-value=8.8e-23 Score=142.90 Aligned_cols=115 Identities=25% Similarity=0.413 Sum_probs=98.9
Q ss_pred CceeeEEEeeCCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCC------CCcchhhhHHH
Q 032072 2 GEEINMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDAN------SIHSFDDYNKP 75 (148)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~------~~~~~~~~~~~ 75 (148)
|.+++|...++ .+++|||+||++++...|..++..|.+ .++|+++|+||+|.|+.... ..+++++++++
T Consensus 17 ~~~i~y~~~G~----~~~~vlllHG~~~~~~~w~~~~~~L~~-~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~ 91 (294)
T PLN02824 17 GYNIRYQRAGT----SGPALVLVHGFGGNADHWRKNTPVLAK-SHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQ 91 (294)
T ss_pred CeEEEEEEcCC----CCCeEEEECCCCCChhHHHHHHHHHHh-CCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHH
Confidence 45566666543 347999999999999999999999984 57999999999999875421 24789999999
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 76 LMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 76 ~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+.++++.+. .++++++||||||.+++.++.++|++|+++|++++..
T Consensus 92 l~~~l~~l~-~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 92 LNDFCSDVV-GDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred HHHHHHHhc-CCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCc
Confidence 999999997 6899999999999999999999999999999999754
No 2
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.90 E-value=1.8e-22 Score=141.93 Aligned_cols=115 Identities=16% Similarity=0.221 Sum_probs=98.4
Q ss_pred eeeEEEeeCCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCC-CCcchhhhHHHHHHHHHh
Q 032072 4 EINMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDAN-SIHSFDDYNKPLMDFMSS 82 (148)
Q Consensus 4 ~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~ 82 (148)
+++|...+.+ .+++|||+||++++...|..+++.|.+.+|+|+++|+||||.|+.... ..++.+++++++.++++.
T Consensus 35 ~i~y~~~G~~---~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~ 111 (302)
T PRK00870 35 RMHYVDEGPA---DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQ 111 (302)
T ss_pred EEEEEecCCC---CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHH
Confidence 4555554332 467999999999999999999999987799999999999999875432 346889999999999999
Q ss_pred cCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 83 LTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 83 ~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+. .++++++||||||.++..++.++|+++++++++++..
T Consensus 112 l~-~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 150 (302)
T PRK00870 112 LD-LTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGL 150 (302)
T ss_pred cC-CCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCC
Confidence 87 6799999999999999999999999999999998643
No 3
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.90 E-value=1.8e-22 Score=140.10 Aligned_cols=113 Identities=75% Similarity=1.305 Sum_probs=97.6
Q ss_pred CCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeC
Q 032072 16 VQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHS 95 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S 95 (148)
+++|+|||+||++++...|..+...|.+.||+|+++|+||+|.+........++++.++++.++++.+...++++++|||
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS 95 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVILVGHS 95 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 35789999999999999999999999878999999999999987544433478899999999999988545899999999
Q ss_pred hhHHHHHHHHHhhchhhceeeEecccccCCCCc
Q 032072 96 AGGLSITQASHKFGNKIRLAVYLAATMLKLGFC 128 (148)
Q Consensus 96 ~Gg~~a~~~~~~~~~~i~~~i~~~~~~~~~~~~ 128 (148)
|||.++..++.++|++++++|++++..+..++.
T Consensus 96 ~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~ 128 (273)
T PLN02211 96 AGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQ 128 (273)
T ss_pred chHHHHHHHHHhChhheeEEEEeccccCCCCCC
Confidence 999999999999999999999998866544443
No 4
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.89 E-value=3.4e-22 Score=138.86 Aligned_cols=116 Identities=16% Similarity=0.214 Sum_probs=98.9
Q ss_pred CceeeEEEeeCCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHH
Q 032072 2 GEEINMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMS 81 (148)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~ 81 (148)
|.+++|..... ...+++|||+||++++...|..+.+.|. .+|+|+++|+||+|.|+... ..++++++++++.++++
T Consensus 11 ~~~~~~~~~~~--~~~~~plvllHG~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~~~~~~i~ 86 (276)
T TIGR02240 11 GQSIRTAVRPG--KEGLTPLLIFNGIGANLELVFPFIEALD-PDLEVIAFDVPGVGGSSTPR-HPYRFPGLAKLAARMLD 86 (276)
T ss_pred CcEEEEEEecC--CCCCCcEEEEeCCCcchHHHHHHHHHhc-cCceEEEECCCCCCCCCCCC-CcCcHHHHHHHHHHHHH
Confidence 45666655421 1245799999999999999999999997 57999999999999997543 34688999999999999
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 82 SLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 82 ~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
.+. .++++|+||||||.+++.++.++|++++++++++++.
T Consensus 87 ~l~-~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 87 YLD-YGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAA 126 (276)
T ss_pred HhC-cCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCC
Confidence 986 6899999999999999999999999999999999865
No 5
>PLN02965 Probable pheophorbidase
Probab=99.89 E-value=3.9e-22 Score=137.17 Aligned_cols=104 Identities=51% Similarity=0.998 Sum_probs=92.4
Q ss_pred eEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHH
Q 032072 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGL 99 (148)
Q Consensus 20 ~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~ 99 (148)
.|||+||++++...|..++..|.+.+|+|+++|+||+|.|.......++.+++++++.++++.+...++++++||||||.
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ 84 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGG 84 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchH
Confidence 59999999999999999999997689999999999999987544334778999999999999986336999999999999
Q ss_pred HHHHHHHhhchhhceeeEeccccc
Q 032072 100 SITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 100 ~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
++..++.++|++|++++++++..+
T Consensus 85 ia~~~a~~~p~~v~~lvl~~~~~~ 108 (255)
T PLN02965 85 SVTEALCKFTDKISMAIYVAAAMV 108 (255)
T ss_pred HHHHHHHhCchheeEEEEEccccC
Confidence 999999999999999999998643
No 6
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.89 E-value=5.2e-22 Score=142.17 Aligned_cols=121 Identities=22% Similarity=0.263 Sum_probs=98.4
Q ss_pred CceeeEEEeeCCCCCCCCeEEEEccCCCCccc-hHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHH
Q 032072 2 GEEINMREIKKPAEVQKPHFVLVHGISGGAWC-WYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFM 80 (148)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~-~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~ 80 (148)
|.++++..+.++....+++|||+||++++... |..++..|.+.||+|+++|+||||.|+.......+++++++++.+++
T Consensus 71 g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l 150 (349)
T PLN02385 71 GVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHY 150 (349)
T ss_pred CCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHH
Confidence 45666666665544467899999999987654 57888889878999999999999998764433357888899988888
Q ss_pred HhcC-----CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 81 SSLT-----DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 81 ~~~~-----~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+.+. +..+++|+||||||.+++.++.++|++++++|++++..
T Consensus 151 ~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~ 197 (349)
T PLN02385 151 SKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMC 197 (349)
T ss_pred HHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccc
Confidence 7663 13479999999999999999999999999999999754
No 7
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.88 E-value=1.9e-21 Score=136.22 Aligned_cols=113 Identities=19% Similarity=0.295 Sum_probs=97.8
Q ss_pred CceeeEEEeeCCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHH
Q 032072 2 GEEINMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMS 81 (148)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~ 81 (148)
|.+++|...+ ++++||++||++++...|..+++.|.+. ++|+++|+||+|.|+.+. ..++..++++++.++++
T Consensus 16 g~~i~y~~~G-----~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~-~~~~~~~~a~dl~~ll~ 88 (295)
T PRK03592 16 GSRMAYIETG-----EGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPD-IDYTFADHARYLDAWFD 88 (295)
T ss_pred CEEEEEEEeC-----CCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCC-CCCCHHHHHHHHHHHHH
Confidence 3455555543 4579999999999999999999999865 599999999999997654 34789999999999999
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 82 SLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 82 ~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
.+. .++++++|||+||.+++.++.++|+++++++++++..
T Consensus 89 ~l~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 128 (295)
T PRK03592 89 ALG-LDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIV 128 (295)
T ss_pred HhC-CCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCC
Confidence 987 6899999999999999999999999999999999743
No 8
>PHA02857 monoglyceride lipase; Provisional
Probab=99.88 E-value=3.5e-21 Score=133.64 Aligned_cols=121 Identities=17% Similarity=0.198 Sum_probs=97.0
Q ss_pred CceeeEEEeeCCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHH
Q 032072 2 GEEINMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMS 81 (148)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~ 81 (148)
|.++.++.+.++ ...+++|+++||++++...|..+++.|.+.||.|+++|+||+|.|+.......+..++.+++.+.+.
T Consensus 10 g~~l~~~~~~~~-~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~ 88 (276)
T PHA02857 10 NDYIYCKYWKPI-TYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVV 88 (276)
T ss_pred CCEEEEEeccCC-CCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHH
Confidence 667888777553 3455778888999999999999999998889999999999999987543333455666666666665
Q ss_pred hcC---CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 82 SLT---DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 82 ~~~---~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
.+. +..+++++||||||.+++.++.++|+.++++|++++...
T Consensus 89 ~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~ 133 (276)
T PHA02857 89 TIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVN 133 (276)
T ss_pred HHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccc
Confidence 432 246899999999999999999999999999999998653
No 9
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.88 E-value=1.9e-21 Score=139.75 Aligned_cols=117 Identities=22% Similarity=0.384 Sum_probs=97.7
Q ss_pred eeeEEEeeCC-CCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHh
Q 032072 4 EINMREIKKP-AEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSS 82 (148)
Q Consensus 4 ~~~~~~~~~~-~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~ 82 (148)
+++|...++. ....+++|||+||++++...|..++..|. .+|+|+++|+||+|.|+......++++++++++.++++.
T Consensus 73 ~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~ 151 (360)
T PLN02679 73 SINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLA-KNYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEE 151 (360)
T ss_pred eEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHH
Confidence 5666655432 11135899999999999999999999998 589999999999999876543457889999999999998
Q ss_pred cCCCCcEEEEEeChhHHHHHHHHH-hhchhhceeeEecccc
Q 032072 83 LTDNEKVILVGHSAGGLSITQASH-KFGNKIRLAVYLAATM 122 (148)
Q Consensus 83 ~~~~~~i~lvG~S~Gg~~a~~~~~-~~~~~i~~~i~~~~~~ 122 (148)
+. .++++++||||||.+++.++. .+|++|+++|++++..
T Consensus 152 l~-~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~ 191 (360)
T PLN02679 152 VV-QKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAG 191 (360)
T ss_pred hc-CCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCcc
Confidence 87 689999999999999998887 4799999999998754
No 10
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.88 E-value=1.7e-21 Score=133.52 Aligned_cols=113 Identities=20% Similarity=0.337 Sum_probs=97.0
Q ss_pred eeEEEeeCCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC
Q 032072 5 INMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT 84 (148)
Q Consensus 5 ~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (148)
++++......+.++|+||++||++++...|..++..|. .+|+|+.+|+||+|.|.... ..+.+++++++.++++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~s~~~~--~~~~~~~~~d~~~~l~~l~ 79 (255)
T PRK10673 3 LNIRAQTAQNPHNNSPIVLVHGLFGSLDNLGVLARDLV-NDHDIIQVDMRNHGLSPRDP--VMNYPAMAQDLLDTLDALQ 79 (255)
T ss_pred ceeeeccCCCCCCCCCEEEECCCCCchhHHHHHHHHHh-hCCeEEEECCCCCCCCCCCC--CCCHHHHHHHHHHHHHHcC
Confidence 44555444444577999999999999999999999997 68999999999999887543 3688999999999999986
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEeccc
Q 032072 85 DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAAT 121 (148)
Q Consensus 85 ~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~ 121 (148)
.++++++||||||.+++.++.++|++|++++++++.
T Consensus 80 -~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~ 115 (255)
T PRK10673 80 -IEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIA 115 (255)
T ss_pred -CCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecC
Confidence 678999999999999999999999999999999754
No 11
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.87 E-value=2.3e-21 Score=132.27 Aligned_cols=114 Identities=20% Similarity=0.360 Sum_probs=98.3
Q ss_pred eEEEeeCCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCC
Q 032072 6 NMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTD 85 (148)
Q Consensus 6 ~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (148)
+|..++.+. .++|+||++||++++...|..+++.+. .+|+|+++|+||+|.|.......++.+++++++.++++.+.
T Consensus 2 ~~~~~~~~~-~~~~~iv~lhG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~- 78 (257)
T TIGR03611 2 HYELHGPPD-ADAPVVVLSSGLGGSGSYWAPQLDVLT-QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALN- 78 (257)
T ss_pred EEEEecCCC-CCCCEEEEEcCCCcchhHHHHHHHHHH-hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhC-
Confidence 455555432 357899999999999999998888887 68999999999999987655455789999999999999887
Q ss_pred CCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 86 NEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
.++++++||||||.+++.++.++|++++++|++++..
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~ 115 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWS 115 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCC
Confidence 6889999999999999999999999999999998754
No 12
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.87 E-value=3.4e-21 Score=137.00 Aligned_cols=121 Identities=17% Similarity=0.263 Sum_probs=95.9
Q ss_pred CceeeEEEeeCCCC-CCCCeEEEEccCCCCc-cchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHH
Q 032072 2 GEEINMREIKKPAE-VQKPHFVLVHGISGGA-WCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDF 79 (148)
Q Consensus 2 g~~~~~~~~~~~~~-~~~~~vl~~hG~~~~~-~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~ 79 (148)
|.+++++.+.++.. ..+++||++||++.+. ..|..++..|.+.||+|+++|+||+|.|........+.+++++++.++
T Consensus 42 g~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~ 121 (330)
T PLN02298 42 GLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSF 121 (330)
T ss_pred CCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHH
Confidence 56788877655432 3467899999998654 345667778887899999999999999875433335777888888888
Q ss_pred HHhcCC-----CCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 80 MSSLTD-----NEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 80 ~~~~~~-----~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
++.+.. ..+++++||||||.+++.++.++|++++++|++++..
T Consensus 122 i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~ 169 (330)
T PLN02298 122 FNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMC 169 (330)
T ss_pred HHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccc
Confidence 887631 3479999999999999999999999999999998764
No 13
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.87 E-value=5.6e-21 Score=140.67 Aligned_cols=119 Identities=17% Similarity=0.277 Sum_probs=97.2
Q ss_pred ceeeEEEeeCCCCCCCCeEEEEccCCCCccchHH-HHHHHH---hCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHH-
Q 032072 3 EEINMREIKKPAEVQKPHFVLVHGISGGAWCWYK-VRCLME---NSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLM- 77 (148)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~-~~~~l~---~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~- 77 (148)
.++++...+++....+++|||+||++++...|.. +...+. +.+|+|+++|+||+|.|+.+....++++++++++.
T Consensus 186 ~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~ 265 (481)
T PLN03087 186 ESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIER 265 (481)
T ss_pred eEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHH
Confidence 4566766666544456899999999999988874 344444 36899999999999998765444578888888884
Q ss_pred HHHHhcCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 78 DFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 78 ~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
.+++.+. .++++++||||||.+++.++.++|++++++++++++.
T Consensus 266 ~ll~~lg-~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~ 309 (481)
T PLN03087 266 SVLERYK-VKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPY 309 (481)
T ss_pred HHHHHcC-CCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCc
Confidence 7778776 7899999999999999999999999999999998754
No 14
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.87 E-value=5e-21 Score=132.41 Aligned_cols=115 Identities=16% Similarity=0.231 Sum_probs=97.8
Q ss_pred ceeeEEEeeCCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHh
Q 032072 3 EEINMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSS 82 (148)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~ 82 (148)
.++++...+.+ ++++|||+||++++...|..+.+.|. .+|+|+++|+||+|.|+......++++++++++.++++.
T Consensus 16 ~~~~~~~~g~~---~~~~vv~~hG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~ 91 (278)
T TIGR03056 16 FHWHVQDMGPT---AGPLLLLLHGTGASTHSWRDLMPPLA-RSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAA 91 (278)
T ss_pred EEEEEEecCCC---CCCeEEEEcCCCCCHHHHHHHHHHHh-hCcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHH
Confidence 34555554332 46899999999999999999999997 579999999999999876554457899999999999988
Q ss_pred cCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 83 LTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 83 ~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+. .++++++||||||.+++.++.++|+++++++++++..
T Consensus 92 ~~-~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~ 130 (278)
T TIGR03056 92 EG-LSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAAL 130 (278)
T ss_pred cC-CCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcc
Confidence 76 5789999999999999999999999999999998754
No 15
>PRK10749 lysophospholipase L2; Provisional
Probab=99.87 E-value=6.5e-21 Score=135.61 Aligned_cols=119 Identities=18% Similarity=0.238 Sum_probs=97.8
Q ss_pred CceeeEEEeeCCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCC-----CCcchhhhHHHH
Q 032072 2 GEEINMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDAN-----SIHSFDDYNKPL 76 (148)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~-----~~~~~~~~~~~~ 76 (148)
|.++++...+++ ..+++||++||++++...|..++..+.+.||+|+++|+||+|.|+.... ...+++++++++
T Consensus 40 g~~l~~~~~~~~--~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~ 117 (330)
T PRK10749 40 DIPIRFVRFRAP--HHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDL 117 (330)
T ss_pred CCEEEEEEccCC--CCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHH
Confidence 456777766543 3457999999999988889899988888999999999999999864321 124788889999
Q ss_pred HHHHHhcC---CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 77 MDFMSSLT---DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 77 ~~~~~~~~---~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
.++++.+. +..+++++||||||.++..++.++|+.++++|++++..
T Consensus 118 ~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~ 166 (330)
T PRK10749 118 AAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMF 166 (330)
T ss_pred HHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchh
Confidence 88887752 25789999999999999999999999999999998754
No 16
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.86 E-value=1.4e-20 Score=131.50 Aligned_cols=104 Identities=13% Similarity=0.225 Sum_probs=91.5
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeCh
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSA 96 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~ 96 (148)
++++|||+||++.....|..+...|. .+|+|+++|+||+|.|+......++.++.++++.++++.+. .++++++||||
T Consensus 33 ~~~~iv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lvG~S~ 110 (286)
T PRK03204 33 TGPPILLCHGNPTWSFLYRDIIVALR-DRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLG-LDRYLSMGQDW 110 (286)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHHh-CCcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHhC-CCCEEEEEECc
Confidence 45899999999988888999998998 57999999999999987654334678899999999998886 68899999999
Q ss_pred hHHHHHHHHHhhchhhceeeEecccc
Q 032072 97 GGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 97 Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
||.+++.++..+|++++++|++++..
T Consensus 111 Gg~va~~~a~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 111 GGPISMAVAVERADRVRGVVLGNTWF 136 (286)
T ss_pred cHHHHHHHHHhChhheeEEEEECccc
Confidence 99999999999999999999987754
No 17
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.86 E-value=1.7e-20 Score=135.31 Aligned_cols=116 Identities=19% Similarity=0.266 Sum_probs=99.6
Q ss_pred ceeeEEEeeCCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCC---CCcchhhhHHHHHHH
Q 032072 3 EEINMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDAN---SIHSFDDYNKPLMDF 79 (148)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~---~~~~~~~~~~~~~~~ 79 (148)
.+++|...++ +.+++|||+||++++...|..++..|. .+|+|+++|+||+|.|+.... ..++++++++++.++
T Consensus 115 ~~~~y~~~G~---~~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~ 190 (383)
T PLN03084 115 FRWFCVESGS---NNNPPVLLIHGFPSQAYSYRKVLPVLS-KNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESL 190 (383)
T ss_pred eEEEEEecCC---CCCCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHH
Confidence 4455554433 246899999999999999999999998 589999999999999876543 247899999999999
Q ss_pred HHhcCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 80 MSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 80 ~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
++.+. .+++.++|||+||.+++.++.++|++++++|+++++..
T Consensus 191 i~~l~-~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~ 233 (383)
T PLN03084 191 IDELK-SDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLT 233 (383)
T ss_pred HHHhC-CCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCc
Confidence 99997 68999999999999999999999999999999998753
No 18
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.85 E-value=1.8e-20 Score=125.06 Aligned_cols=100 Identities=29% Similarity=0.562 Sum_probs=90.7
Q ss_pred EEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCC-CCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHH
Q 032072 21 FVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDAN-SIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGL 99 (148)
Q Consensus 21 vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~ 99 (148)
|||+||++++...|..+++.|. .+|+|+++|+||+|.|..... ...+.+++++++.++++.+. .++++++|||+||.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~lvG~S~Gg~ 78 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALG-IKKVILVGHSMGGM 78 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTT-TSSEEEEEETHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccc-cccccccccccccc
Confidence 7999999999999999999996 799999999999999876543 34788999999999999998 58999999999999
Q ss_pred HHHHHHHhhchhhceeeEecccc
Q 032072 100 SITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 100 ~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+++.++.++|++++++++++++.
T Consensus 79 ~a~~~a~~~p~~v~~~vl~~~~~ 101 (228)
T PF12697_consen 79 IALRLAARYPDRVKGLVLLSPPP 101 (228)
T ss_dssp HHHHHHHHSGGGEEEEEEESESS
T ss_pred cccccccccccccccceeecccc
Confidence 99999999999999999999876
No 19
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.85 E-value=1.7e-20 Score=129.57 Aligned_cols=108 Identities=20% Similarity=0.338 Sum_probs=101.5
Q ss_pred CCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCC-CCcchhhhHHHHHHHHHhcCCCCcEEEEE
Q 032072 15 EVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDAN-SIHSFDDYNKPLMDFMSSLTDNEKVILVG 93 (148)
Q Consensus 15 ~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~lvG 93 (148)
.+.+|+|+++||+......|+.....|+..||+|+++|+||+|.|+.++. ..+++...++++..+++.+. .+++.++|
T Consensus 41 ~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg-~~k~~lvg 119 (322)
T KOG4178|consen 41 PGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLG-LKKAFLVG 119 (322)
T ss_pred CCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhc-cceeEEEe
Confidence 44789999999999999999999999998889999999999999988776 66899999999999999998 89999999
Q ss_pred eChhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 94 HSAGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 94 ~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
|++|+++++.++..+|++++++++++.+..
T Consensus 120 HDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 120 HDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred ccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 999999999999999999999999998875
No 20
>PLN02578 hydrolase
Probab=99.85 E-value=2.1e-20 Score=134.13 Aligned_cols=103 Identities=21% Similarity=0.328 Sum_probs=91.8
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeCh
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSA 96 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~ 96 (148)
++++||++||++++...|..+...|. .+|+|+++|++|+|.|+... ..++..++++++.++++.+. .++++++|||+
T Consensus 85 ~g~~vvliHG~~~~~~~w~~~~~~l~-~~~~v~~~D~~G~G~S~~~~-~~~~~~~~a~~l~~~i~~~~-~~~~~lvG~S~ 161 (354)
T PLN02578 85 EGLPIVLIHGFGASAFHWRYNIPELA-KKYKVYALDLLGFGWSDKAL-IEYDAMVWRDQVADFVKEVV-KEPAVLVGNSL 161 (354)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCCcc-cccCHHHHHHHHHHHHHHhc-cCCeEEEEECH
Confidence 45789999999999999999888887 57999999999999987654 34788888999999999987 68999999999
Q ss_pred hHHHHHHHHHhhchhhceeeEecccc
Q 032072 97 GGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 97 Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
||.+++.++.++|+++++++++++..
T Consensus 162 Gg~ia~~~A~~~p~~v~~lvLv~~~~ 187 (354)
T PLN02578 162 GGFTALSTAVGYPELVAGVALLNSAG 187 (354)
T ss_pred HHHHHHHHHHhChHhcceEEEECCCc
Confidence 99999999999999999999998653
No 21
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.85 E-value=1.7e-20 Score=127.77 Aligned_cols=100 Identities=22% Similarity=0.263 Sum_probs=88.3
Q ss_pred CCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChh
Q 032072 18 KPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAG 97 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~G 97 (148)
+|+|||+||++++...|..+++.|. +|+|+++|+||+|.|.... ..+.+++++++.++++.+. .++++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~--~~~vi~~D~~G~G~S~~~~--~~~~~~~~~~l~~~l~~~~-~~~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP--DYPRLYIDLPGHGGSAAIS--VDGFADVSRLLSQTLQSYN-ILPYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC--CCCEEEecCCCCCCCCCcc--ccCHHHHHHHHHHHHHHcC-CCCeEEEEECHH
Confidence 5789999999999999999999883 6999999999999987654 2588999999999999986 789999999999
Q ss_pred HHHHHHHHHhhch-hhceeeEecccc
Q 032072 98 GLSITQASHKFGN-KIRLAVYLAATM 122 (148)
Q Consensus 98 g~~a~~~~~~~~~-~i~~~i~~~~~~ 122 (148)
|.+++.++.++++ ++++++++++..
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCCC
Confidence 9999999999865 499999887653
No 22
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.85 E-value=1.9e-20 Score=129.95 Aligned_cols=110 Identities=22% Similarity=0.319 Sum_probs=91.8
Q ss_pred CCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCC---cchhhhHHHHHHHHHhcCCCCcEE
Q 032072 14 AEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSI---HSFDDYNKPLMDFMSSLTDNEKVI 90 (148)
Q Consensus 14 ~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~ 90 (148)
++.++.++|++||+|+....|..-.+.|+ ...+|+++|++|+|.|+++.... .......+.+++...... .++.+
T Consensus 86 ~~~~~~plVliHGyGAg~g~f~~Nf~~La-~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~-L~Kmi 163 (365)
T KOG4409|consen 86 ESANKTPLVLIHGYGAGLGLFFRNFDDLA-KIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMG-LEKMI 163 (365)
T ss_pred cccCCCcEEEEeccchhHHHHHHhhhhhh-hcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcC-Cccee
Confidence 34678899999999999999998889998 58999999999999998765321 223455666666666666 78999
Q ss_pred EEEeChhHHHHHHHHHhhchhhceeeEecccccCC
Q 032072 91 LVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKL 125 (148)
Q Consensus 91 lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~~~ 125 (148)
|+|||+||+++..||.++|++|+++||++|-..+.
T Consensus 164 lvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 164 LVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPE 198 (365)
T ss_pred EeeccchHHHHHHHHHhChHhhceEEEeccccccc
Confidence 99999999999999999999999999999866544
No 23
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.85 E-value=3.6e-20 Score=128.73 Aligned_cols=104 Identities=19% Similarity=0.264 Sum_probs=84.1
Q ss_pred CCCeEEEEccCCCCccchHHH---HHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEE
Q 032072 17 QKPHFVLVHGISGGAWCWYKV---RCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVG 93 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~---~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG 93 (148)
+.++||++||++++...|..+ ...+.+.+|+|+++|+||+|.|+............++++.++++.+. .++++++|
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~-~~~~~lvG 107 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALD-IEKAHLVG 107 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHcC-CCCeeEEE
Confidence 467899999999887777543 34455578999999999999997653221222245778888888886 78999999
Q ss_pred eChhHHHHHHHHHhhchhhceeeEeccc
Q 032072 94 HSAGGLSITQASHKFGNKIRLAVYLAAT 121 (148)
Q Consensus 94 ~S~Gg~~a~~~~~~~~~~i~~~i~~~~~ 121 (148)
|||||.+++.++.++|+++++++++++.
T Consensus 108 ~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 135 (282)
T TIGR03343 108 NSMGGATALNFALEYPDRIGKLILMGPG 135 (282)
T ss_pred ECchHHHHHHHHHhChHhhceEEEECCC
Confidence 9999999999999999999999999875
No 24
>PRK06489 hypothetical protein; Provisional
Probab=99.85 E-value=3.7e-20 Score=133.15 Aligned_cols=119 Identities=14% Similarity=0.252 Sum_probs=90.2
Q ss_pred CceeeEEEeeCCCC----CCCCeEEEEccCCCCccchH--HHHHHH-------HhCCcEEEEEecCCCCCCCCCCCC---
Q 032072 2 GEEINMREIKKPAE----VQKPHFVLVHGISGGAWCWY--KVRCLM-------ENSGYKVSCINLKGSGTDPSDANS--- 65 (148)
Q Consensus 2 g~~~~~~~~~~~~~----~~~~~vl~~hG~~~~~~~~~--~~~~~l-------~~~~~~v~~~d~~g~g~s~~~~~~--- 65 (148)
|.+++|...+.+.. +.+|+|||+||++++...|. .+.+.+ ...+|+|+++|+||||.|+.....
T Consensus 49 g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~ 128 (360)
T PRK06489 49 ELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRA 128 (360)
T ss_pred CceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCC
Confidence 45666666653210 11689999999999887775 455444 136799999999999998754321
Q ss_pred ---CcchhhhHHHHHHHH-HhcCCCCcEE-EEEeChhHHHHHHHHHhhchhhceeeEeccc
Q 032072 66 ---IHSFDDYNKPLMDFM-SSLTDNEKVI-LVGHSAGGLSITQASHKFGNKIRLAVYLAAT 121 (148)
Q Consensus 66 ---~~~~~~~~~~~~~~~-~~~~~~~~i~-lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~ 121 (148)
.+++++.++++.+.+ +.+. .+++. ++||||||.+++.++.++|++++++|++++.
T Consensus 129 ~~~~~~~~~~a~~~~~~l~~~lg-i~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~ 188 (360)
T PRK06489 129 AFPRYDYDDMVEAQYRLVTEGLG-VKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQ 188 (360)
T ss_pred CCCcccHHHHHHHHHHHHHHhcC-CCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccC
Confidence 367788888877755 5565 56774 8999999999999999999999999999874
No 25
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.84 E-value=3.9e-20 Score=125.33 Aligned_cols=113 Identities=17% Similarity=0.293 Sum_probs=95.6
Q ss_pred eeEEEeeCCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC
Q 032072 5 INMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT 84 (148)
Q Consensus 5 ~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (148)
++|+..++ .+.+|+||++||++++...|..+++.|. .+|+|+++|+||+|.|.... ...+.+++++++.++++.+.
T Consensus 2 ~~~~~~g~--~~~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~i~~~~ 77 (251)
T TIGR02427 2 LHYRLDGA--ADGAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDAPE-GPYSIEDLADDVLALLDHLG 77 (251)
T ss_pred ceEEeecC--CCCCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhC
Confidence 44544432 2256899999999999999999998887 68999999999999986543 34688999999999999886
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 85 DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 85 ~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
.+++.++|||+||.+++.++.++|++++++++++++.
T Consensus 78 -~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 114 (251)
T TIGR02427 78 -IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAA 114 (251)
T ss_pred -CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCcc
Confidence 6789999999999999999999999999999998654
No 26
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.84 E-value=5e-20 Score=126.62 Aligned_cols=96 Identities=24% Similarity=0.387 Sum_probs=81.7
Q ss_pred CCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChh
Q 032072 18 KPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAG 97 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~G 97 (148)
.++|||+||++++...|..+...|. ..|+|+++|+||+|.|.... ..+.++.++++.+ +. .++++++|||||
T Consensus 13 ~~~ivllHG~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~l~~----~~-~~~~~lvGhS~G 84 (256)
T PRK10349 13 NVHLVLLHGWGLNAEVWRCIDEELS-SHFTLHLVDLPGFGRSRGFG--ALSLADMAEAVLQ----QA-PDKAIWLGWSLG 84 (256)
T ss_pred CCeEEEECCCCCChhHHHHHHHHHh-cCCEEEEecCCCCCCCCCCC--CCCHHHHHHHHHh----cC-CCCeEEEEECHH
Confidence 3579999999999999999999998 57999999999999987542 3566666666553 33 578999999999
Q ss_pred HHHHHHHHHhhchhhceeeEeccc
Q 032072 98 GLSITQASHKFGNKIRLAVYLAAT 121 (148)
Q Consensus 98 g~~a~~~~~~~~~~i~~~i~~~~~ 121 (148)
|.+++.++.++|+++++++++++.
T Consensus 85 g~ia~~~a~~~p~~v~~lili~~~ 108 (256)
T PRK10349 85 GLVASQIALTHPERVQALVTVASS 108 (256)
T ss_pred HHHHHHHHHhChHhhheEEEecCc
Confidence 999999999999999999999874
No 27
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.83 E-value=1.5e-19 Score=126.67 Aligned_cols=122 Identities=25% Similarity=0.422 Sum_probs=101.8
Q ss_pred CceeeEEEeeCCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCC-CCCCCCcchhhhHHHHHHHH
Q 032072 2 GEEINMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDP-SDANSIHSFDDYNKPLMDFM 80 (148)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~-~~~~~~~~~~~~~~~~~~~~ 80 (148)
|..+.++.+..+.+ ...+|+++||++.+...|..++..|...||.|+++|+||||.|. .......+++++..++..++
T Consensus 19 ~~~~~~~~~~~~~~-~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~ 97 (298)
T COG2267 19 GTRLRYRTWAAPEP-PKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFV 97 (298)
T ss_pred CceEEEEeecCCCC-CCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHH
Confidence 34556666654433 33799999999999999999999999999999999999999997 44444466888888888888
Q ss_pred HhcC---CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccccC
Q 032072 81 SSLT---DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLK 124 (148)
Q Consensus 81 ~~~~---~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~~ 124 (148)
+... ...+++++||||||.++..++.+++.+++++|+.+|....
T Consensus 98 ~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l 144 (298)
T COG2267 98 ETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGL 144 (298)
T ss_pred HHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccC
Confidence 8774 3589999999999999999999999999999999987643
No 28
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.82 E-value=7.9e-19 Score=120.89 Aligned_cols=107 Identities=16% Similarity=0.155 Sum_probs=84.6
Q ss_pred CCCCeEEEEccCCCCc----cchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC--CCCcE
Q 032072 16 VQKPHFVLVHGISGGA----WCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT--DNEKV 89 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~----~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i 89 (148)
+.+++||++||+++.. ..|..+++.|.+.||.|+.+|+||+|.|..... ..+.+.+.+++.+.++.+. ...++
T Consensus 23 ~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~-~~~~~~~~~Dv~~ai~~L~~~~~~~v 101 (266)
T TIGR03101 23 GPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFA-AARWDVWKEDVAAAYRWLIEQGHPPV 101 (266)
T ss_pred CCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccc-cCCHHHHHHHHHHHHHHHHhcCCCCE
Confidence 3467899999998642 345667888988999999999999999875443 2466677777665544332 25799
Q ss_pred EEEEeChhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 90 ILVGHSAGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 90 ~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
+++||||||.+++.++.++|++++++|+++|...
T Consensus 102 ~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 102 TLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred EEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 9999999999999999999999999999998653
No 29
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.82 E-value=2.2e-19 Score=128.71 Aligned_cols=120 Identities=19% Similarity=0.321 Sum_probs=94.1
Q ss_pred CceeeEEEeeCCCCCCCCeEEEEccCCCCcc-----------chHHHH---HHHHhCCcEEEEEecCC--CCCCCCC---
Q 032072 2 GEEINMREIKKPAEVQKPHFVLVHGISGGAW-----------CWYKVR---CLMENSGYKVSCINLKG--SGTDPSD--- 62 (148)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~-----------~~~~~~---~~l~~~~~~v~~~d~~g--~g~s~~~--- 62 (148)
|.+++|..++.+....+++||++||++++.. .|..++ ..+...+|+|+++|+|| +|.+.+.
T Consensus 15 ~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~ 94 (351)
T TIGR01392 15 DVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSIN 94 (351)
T ss_pred CceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCC
Confidence 5678888887643345679999999999653 255553 24444789999999999 5554321
Q ss_pred C--------CCCcchhhhHHHHHHHHHhcCCCCc-EEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 63 A--------NSIHSFDDYNKPLMDFMSSLTDNEK-VILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 63 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~-i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+ ...++++++++++.++++.+. .++ ++++||||||.+++.++.++|++++++|++++..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 95 PGGRPYGSDFPLITIRDDVKAQKLLLDHLG-IEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSA 162 (351)
T ss_pred CCCCcCCCCCCCCcHHHHHHHHHHHHHHcC-CCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCC
Confidence 0 113678999999999999986 677 9999999999999999999999999999999865
No 30
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.82 E-value=3e-19 Score=120.75 Aligned_cols=103 Identities=22% Similarity=0.391 Sum_probs=88.5
Q ss_pred CCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCC-CCcchhhhHHH-HHHHHHhcCCCCcEEEEEeC
Q 032072 18 KPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDAN-SIHSFDDYNKP-LMDFMSSLTDNEKVILVGHS 95 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~i~lvG~S 95 (148)
+|+||++||++++...|..+.+.|. .+++|+++|+||+|.|+.... ...+.++.+++ +.++++.+. .++++++|||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G~S 78 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLG-IEPFFLVGYS 78 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcC-CCeEEEEEec
Confidence 3789999999999999999999998 799999999999999865432 34677788877 666666665 6899999999
Q ss_pred hhHHHHHHHHHhhchhhceeeEecccc
Q 032072 96 AGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 96 ~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+||.+++.++.++|+.+++++++++..
T Consensus 79 ~Gg~ia~~~a~~~~~~v~~lil~~~~~ 105 (251)
T TIGR03695 79 MGGRIALYYALQYPERVQGLILESGSP 105 (251)
T ss_pred cHHHHHHHHHHhCchheeeeEEecCCC
Confidence 999999999999999999999988753
No 31
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.81 E-value=8.3e-19 Score=121.21 Aligned_cols=105 Identities=23% Similarity=0.350 Sum_probs=86.4
Q ss_pred CCCeEEEEccCCCCccc-hHHHHHHHHhCCcEEEEEecCCCCCCCCCCCC--CcchhhhHHHHHHHHHhcCCCCcEEEEE
Q 032072 17 QKPHFVLVHGISGGAWC-WYKVRCLMENSGYKVSCINLKGSGTDPSDANS--IHSFDDYNKPLMDFMSSLTDNEKVILVG 93 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~-~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~lvG 93 (148)
.+++|||+||++++... |..+...+.+.||+|+++|+||+|.|...... ..+.+++++++.++++.+. .++++++|
T Consensus 24 ~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~liG 102 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLG-LDKFYLLG 102 (288)
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcC-CCcEEEEE
Confidence 36899999998765544 44555666655899999999999998754332 2678999999999998886 67899999
Q ss_pred eChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 94 HSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 94 ~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
|||||.+++.++.++|+++++++++++..
T Consensus 103 ~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 103 HSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred eehHHHHHHHHHHhCccccceeeEecccc
Confidence 99999999999999999999999988654
No 32
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.81 E-value=2.6e-19 Score=127.99 Aligned_cols=113 Identities=14% Similarity=0.179 Sum_probs=86.5
Q ss_pred CceeeEEEeeCCCCCCCCeEEEEccCCCCcc------------chHHHHH---HHHhCCcEEEEEecCCCCCCCCCCCCC
Q 032072 2 GEEINMREIKKPAEVQKPHFVLVHGISGGAW------------CWYKVRC---LMENSGYKVSCINLKGSGTDPSDANSI 66 (148)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~------------~~~~~~~---~l~~~~~~v~~~d~~g~g~s~~~~~~~ 66 (148)
|.+++|...++ .++++|++||+.++.. .|..+.. .|...+|+|+++|+||+|.|... .
T Consensus 45 ~~~l~y~~~G~----~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~---~ 117 (343)
T PRK08775 45 DLRLRYELIGP----AGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV---P 117 (343)
T ss_pred CceEEEEEecc----CCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC---C
Confidence 45666666543 2335666666655444 5666665 46335799999999999877432 3
Q ss_pred cchhhhHHHHHHHHHhcCCCCc-EEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 67 HSFDDYNKPLMDFMSSLTDNEK-VILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~-i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
++..+.++++.++++.+. .++ ++++||||||.+++.++.++|++++++|++++..
T Consensus 118 ~~~~~~a~dl~~ll~~l~-l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~ 173 (343)
T PRK08775 118 IDTADQADAIALLLDALG-IARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAH 173 (343)
T ss_pred CCHHHHHHHHHHHHHHcC-CCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccc
Confidence 677889999999999987 545 5899999999999999999999999999998754
No 33
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.81 E-value=3.9e-19 Score=116.40 Aligned_cols=104 Identities=21% Similarity=0.287 Sum_probs=92.7
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC--CCCcEEEEEe
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT--DNEKVILVGH 94 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~lvG~ 94 (148)
...+|+++||+.|+....+.+.+.|.+.||.|.+|.+||||...... ...+.++|.+++.+..+.+. ..+.|.++|.
T Consensus 14 G~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~f-l~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~Gl 92 (243)
T COG1647 14 GNRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDF-LKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGL 92 (243)
T ss_pred CCEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHH-hcCCHHHHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 44799999999999999999999999999999999999999865443 33788999999988888874 4689999999
Q ss_pred ChhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 95 SAGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 95 S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
||||.+++.++.++| +++++.++++..
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m~a~~~ 119 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPMCAPVN 119 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeeecCCcc
Confidence 999999999999998 899999999874
No 34
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.81 E-value=8.7e-19 Score=127.08 Aligned_cols=119 Identities=17% Similarity=0.301 Sum_probs=93.0
Q ss_pred ceeeEEEeeCCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHh
Q 032072 3 EEINMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSS 82 (148)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~ 82 (148)
..+.++.+.+...+.+++||++||++++...|..+++.|.+.||.|+++|++|||.|+.......+.+.+.+++.++++.
T Consensus 121 ~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~ 200 (395)
T PLN02652 121 NALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEK 200 (395)
T ss_pred CEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 34555555444344567999999999998889999999988899999999999999876543335677777888777777
Q ss_pred cC---CCCcEEEEEeChhHHHHHHHHHhhc---hhhceeeEecccc
Q 032072 83 LT---DNEKVILVGHSAGGLSITQASHKFG---NKIRLAVYLAATM 122 (148)
Q Consensus 83 ~~---~~~~i~lvG~S~Gg~~a~~~~~~~~---~~i~~~i~~~~~~ 122 (148)
+. +..+++++||||||.+++.++. +| ++++++|+.++..
T Consensus 201 l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 201 IRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPAL 245 (395)
T ss_pred HHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECccc
Confidence 63 2357999999999999998775 45 4799999988754
No 35
>PRK07581 hypothetical protein; Validated
Probab=99.81 E-value=3.6e-19 Score=127.04 Aligned_cols=120 Identities=13% Similarity=0.126 Sum_probs=85.0
Q ss_pred CceeeEEEeeCCCCCCCCeEEEEccCCCCccchHHHH---HHHHhCCcEEEEEecCCCCCCCCCCCC--Ccchhh-----
Q 032072 2 GEEINMREIKKPAEVQKPHFVLVHGISGGAWCWYKVR---CLMENSGYKVSCINLKGSGTDPSDANS--IHSFDD----- 71 (148)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~---~~l~~~~~~v~~~d~~g~g~s~~~~~~--~~~~~~----- 71 (148)
|.+++|...+.+..+..++|+++||++++...|..+. ..|...+|+|+++|+||+|.|+.+... .+++++
T Consensus 25 ~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~ 104 (339)
T PRK07581 25 DARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVT 104 (339)
T ss_pred CceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCcee
Confidence 4567777776543334567788788877666564332 355546899999999999998754321 223222
Q ss_pred hHHHHHH----HHHhcCCCCc-EEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 72 YNKPLMD----FMSSLTDNEK-VILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 72 ~~~~~~~----~~~~~~~~~~-i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
.++++.+ +++.+. .++ ++||||||||.+++.++.++|++|+++|++++..
T Consensus 105 ~~~~~~~~~~~l~~~lg-i~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~ 159 (339)
T PRK07581 105 IYDNVRAQHRLLTEKFG-IERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTA 159 (339)
T ss_pred HHHHHHHHHHHHHHHhC-CCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCC
Confidence 3344433 555666 678 5799999999999999999999999999998654
No 36
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.80 E-value=1.2e-18 Score=122.88 Aligned_cols=116 Identities=14% Similarity=0.173 Sum_probs=90.1
Q ss_pred CceeeEEEeeCCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCC-CCcchhhhHHHHHHHH
Q 032072 2 GEEINMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDAN-SIHSFDDYNKPLMDFM 80 (148)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~ 80 (148)
|.+++|...+++ +.++||++||+.++...+ .+...+...+|+|+++|+||+|.|..... ...+.++.++++..++
T Consensus 14 ~~~l~y~~~g~~---~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~ 89 (306)
T TIGR01249 14 NHQLYYEQSGNP---DGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLR 89 (306)
T ss_pred CcEEEEEECcCC---CCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHH
Confidence 456666665432 357899999987765543 33334444689999999999999875432 2356778888998888
Q ss_pred HhcCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 81 SSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 81 ~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+.+. .++++++||||||.+++.++.++|++++++|++++..
T Consensus 90 ~~l~-~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 90 EKLG-IKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHcC-CCCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 8886 6789999999999999999999999999999998754
No 37
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.80 E-value=9.1e-19 Score=118.32 Aligned_cols=97 Identities=21% Similarity=0.304 Sum_probs=82.2
Q ss_pred CCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChh
Q 032072 18 KPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAG 97 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~G 97 (148)
+++|||+||++++...|..+++.|. .+|+|+++|+||+|.|.... ..+.+++++++.+.+ .++++++|||||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~-~~~~vi~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~-----~~~~~lvG~S~G 75 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELS-AHFTLHLVDLPGHGRSRGFG--PLSLADAAEAIAAQA-----PDPAIWLGWSLG 75 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhc-cCeEEEEecCCcCccCCCCC--CcCHHHHHHHHHHhC-----CCCeEEEEEcHH
Confidence 4789999999999999999999997 67999999999999986542 356666666665443 368999999999
Q ss_pred HHHHHHHHHhhchhhceeeEecccc
Q 032072 98 GLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 98 g~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
|.+++.++.++|++++++|++++..
T Consensus 76 g~~a~~~a~~~p~~v~~~il~~~~~ 100 (245)
T TIGR01738 76 GLVALHIAATHPDRVRALVTVASSP 100 (245)
T ss_pred HHHHHHHHHHCHHhhheeeEecCCc
Confidence 9999999999999999999997754
No 38
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.80 E-value=4.4e-18 Score=123.91 Aligned_cols=105 Identities=18% Similarity=0.297 Sum_probs=84.5
Q ss_pred CCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchh----hhHHHHHHHHHhcCCCCcEEE
Q 032072 16 VQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFD----DYNKPLMDFMSSLTDNEKVIL 91 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~l 91 (148)
+++|+||++||++++...|...+..|. .+|+|+++|+||+|.|+.......+.+ ..++++.++++.+. .+++++
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~~~L~-~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~-~~~~~l 180 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNFDALA-SRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKN-LSNFIL 180 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHHHHHH-hCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcC-CCCeEE
Confidence 467899999999998888888888887 479999999999999875432211222 23455666776665 679999
Q ss_pred EEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 92 VGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 92 vG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+||||||.+++.++.++|++++++|++++..
T Consensus 181 vGhS~GG~la~~~a~~~p~~v~~lvl~~p~~ 211 (402)
T PLN02894 181 LGHSFGGYVAAKYALKHPEHVQHLILVGPAG 211 (402)
T ss_pred EEECHHHHHHHHHHHhCchhhcEEEEECCcc
Confidence 9999999999999999999999999998754
No 39
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.80 E-value=2.7e-18 Score=123.65 Aligned_cols=103 Identities=23% Similarity=0.420 Sum_probs=91.1
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeCh
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSA 96 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~ 96 (148)
++++|||+||++++...|..+.+.|. .+|+|+++|+||+|.+.... ...+..++++++.++++.+. ..+++++|||+
T Consensus 130 ~~~~vl~~HG~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~lvG~S~ 206 (371)
T PRK14875 130 DGTPVVLIHGFGGDLNNWLFNHAALA-AGRPVIALDLPGHGASSKAV-GAGSLDELAAAVLAFLDALG-IERAHLVGHSM 206 (371)
T ss_pred CCCeEEEECCCCCccchHHHHHHHHh-cCCEEEEEcCCCCCCCCCCC-CCCCHHHHHHHHHHHHHhcC-CccEEEEeech
Confidence 56899999999999999999999998 46999999999999986443 34688899999999998886 67899999999
Q ss_pred hHHHHHHHHHhhchhhceeeEecccc
Q 032072 97 GGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 97 Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
||.+++.++..+|+++++++++++..
T Consensus 207 Gg~~a~~~a~~~~~~v~~lv~~~~~~ 232 (371)
T PRK14875 207 GGAVALRLAARAPQRVASLTLIAPAG 232 (371)
T ss_pred HHHHHHHHHHhCchheeEEEEECcCC
Confidence 99999999999999999999998763
No 40
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.78 E-value=2.9e-18 Score=121.44 Aligned_cols=107 Identities=26% Similarity=0.512 Sum_probs=93.3
Q ss_pred CCCCeEEEEccCCCCccchHHHHHHHHhC-CcEEEEEecCCCC-CCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEE
Q 032072 16 VQKPHFVLVHGISGGAWCWYKVRCLMENS-GYKVSCINLKGSG-TDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVG 93 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~~-~~~v~~~d~~g~g-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG 93 (148)
+.+++|+++||++++...|+.....|... ++.|+++|++|+| .|..+....++..++++.+.++..+.. .++++++|
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~-~~~~~lvg 134 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVF-VEPVSLVG 134 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhc-CcceEEEE
Confidence 46899999999999999999988888743 4899999999999 555566666899999999999999987 67799999
Q ss_pred eChhHHHHHHHHHhhchhhceee---Eeccccc
Q 032072 94 HSAGGLSITQASHKFGNKIRLAV---YLAATML 123 (148)
Q Consensus 94 ~S~Gg~~a~~~~~~~~~~i~~~i---~~~~~~~ 123 (148)
||+||.++..+|..+|+.+++++ +++++..
T Consensus 135 hS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~ 167 (326)
T KOG1454|consen 135 HSLGGIVALKAAAYYPETVDSLVLLDLLGPPVY 167 (326)
T ss_pred eCcHHHHHHHHHHhCcccccceeeecccccccc
Confidence 99999999999999999999999 5555543
No 41
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.78 E-value=3.1e-18 Score=123.97 Aligned_cols=120 Identities=16% Similarity=0.343 Sum_probs=92.1
Q ss_pred CceeeEEEeeCCCCCCCCeEEEEccCCCCccc-------------hHHHHH---HHHhCCcEEEEEecCCC-CCCCCCC-
Q 032072 2 GEEINMREIKKPAEVQKPHFVLVHGISGGAWC-------------WYKVRC---LMENSGYKVSCINLKGS-GTDPSDA- 63 (148)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~-------------~~~~~~---~l~~~~~~v~~~d~~g~-g~s~~~~- 63 (148)
|.+++|...+.+..+.+|+||++||++++... |..++. .+...+|+|+++|++|+ +.|+.+.
T Consensus 32 ~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~ 111 (379)
T PRK00175 32 PVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSS 111 (379)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCC
Confidence 45677877775433347899999999998875 444431 33236899999999983 3332211
Q ss_pred ---C---------CCcchhhhHHHHHHHHHhcCCCCc-EEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 64 ---N---------SIHSFDDYNKPLMDFMSSLTDNEK-VILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 64 ---~---------~~~~~~~~~~~~~~~~~~~~~~~~-i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
. ..++++++++++.++++.+. .++ ++++||||||.+++.++.++|++++++|++++..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 182 (379)
T PRK00175 112 INPDTGKPYGSDFPVITIRDWVRAQARLLDALG-ITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSA 182 (379)
T ss_pred CCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhC-CCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCc
Confidence 0 14689999999999999987 567 5999999999999999999999999999998765
No 42
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.78 E-value=9.5e-18 Score=114.71 Aligned_cols=122 Identities=20% Similarity=0.265 Sum_probs=101.7
Q ss_pred CceeeEEEeeCCC-CCCCCeEEEEccCCCCc-cchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHH
Q 032072 2 GEEINMREIKKPA-EVQKPHFVLVHGISGGA-WCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDF 79 (148)
Q Consensus 2 g~~~~~~~~~~~~-~~~~~~vl~~hG~~~~~-~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~ 79 (148)
|.++....+.+.. .+.+..|+++||++... ..|..++..|...||.|+++|++|||.|+.......+.+..+.++.++
T Consensus 37 G~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~ 116 (313)
T KOG1455|consen 37 GAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISF 116 (313)
T ss_pred CCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHH
Confidence 4456666554433 24567899999999865 678889999999999999999999999998777778889999999888
Q ss_pred HHhcC-----CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 80 MSSLT-----DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 80 ~~~~~-----~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
.+... ...+..+.||||||.+++.++.+.|+..+++|+++|...
T Consensus 117 ~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~ 165 (313)
T KOG1455|consen 117 FDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCK 165 (313)
T ss_pred HHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccc
Confidence 87642 246899999999999999999999999999999998764
No 43
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.75 E-value=2.1e-17 Score=117.73 Aligned_cols=119 Identities=19% Similarity=0.306 Sum_probs=89.8
Q ss_pred CceeeEEEeeCCCCCCCCeEEEEccCCCCcc-ch-------------------------HHHHHHHHhCCcEEEEEecCC
Q 032072 2 GEEINMREIKKPAEVQKPHFVLVHGISGGAW-CW-------------------------YKVRCLMENSGYKVSCINLKG 55 (148)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~-~~-------------------------~~~~~~l~~~~~~v~~~d~~g 55 (148)
|.++.++.+.++ ..+.+|+++||++.+.. .+ ..+++.|.+.||.|+++|+||
T Consensus 7 g~~l~~~~~~~~--~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rG 84 (332)
T TIGR01607 7 GLLLKTYSWIVK--NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQG 84 (332)
T ss_pred CCeEEEeeeecc--CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccc
Confidence 566777766543 35679999999998764 21 357889988999999999999
Q ss_pred CCCCCCCC---CCCcchhhhHHHHHHHHHhcC----------------------C-CCcEEEEEeChhHHHHHHHHHhhc
Q 032072 56 SGTDPSDA---NSIHSFDDYNKPLMDFMSSLT----------------------D-NEKVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 56 ~g~s~~~~---~~~~~~~~~~~~~~~~~~~~~----------------------~-~~~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
||.|.... ....++++.++++.++++... + ..+++++||||||.++..++.+++
T Consensus 85 HG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~ 164 (332)
T TIGR01607 85 HGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLG 164 (332)
T ss_pred cCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhc
Confidence 99887532 112477888888877776532 1 458999999999999999987654
Q ss_pred h--------hhceeeEecccc
Q 032072 110 N--------KIRLAVYLAATM 122 (148)
Q Consensus 110 ~--------~i~~~i~~~~~~ 122 (148)
+ .++++|++++..
T Consensus 165 ~~~~~~~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 165 KSNENNDKLNIKGCISLSGMI 185 (332)
T ss_pred cccccccccccceEEEeccce
Confidence 2 588988888764
No 44
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.74 E-value=7e-17 Score=133.37 Aligned_cols=103 Identities=22% Similarity=0.325 Sum_probs=90.4
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCC-------CCCcchhhhHHHHHHHHHhcCCCCcE
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDA-------NSIHSFDDYNKPLMDFMSSLTDNEKV 89 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i 89 (148)
.+++|||+||++++...|..+...|. .+|+|+++|+||+|.|.... ...++++++++++.++++.+. .+++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~-~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~-~~~v 1447 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAIS-GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHIT-PGKV 1447 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhC-CCCE
Confidence 46899999999999999999999997 57999999999999886432 123578888999999998887 6899
Q ss_pred EEEEeChhHHHHHHHHHhhchhhceeeEeccc
Q 032072 90 ILVGHSAGGLSITQASHKFGNKIRLAVYLAAT 121 (148)
Q Consensus 90 ~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~ 121 (148)
+++||||||.+++.++.++|+++++++++++.
T Consensus 1448 ~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~ 1479 (1655)
T PLN02980 1448 TLVGYSMGARIALYMALRFSDKIEGAVIISGS 1479 (1655)
T ss_pred EEEEECHHHHHHHHHHHhChHhhCEEEEECCC
Confidence 99999999999999999999999999999764
No 45
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.74 E-value=1.3e-16 Score=116.60 Aligned_cols=118 Identities=10% Similarity=0.104 Sum_probs=87.5
Q ss_pred eeeEEEeeCCCCCCCCeEEEEccCCCCc-cchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHh
Q 032072 4 EINMREIKKPAEVQKPHFVLVHGISGGA-WCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSS 82 (148)
Q Consensus 4 ~~~~~~~~~~~~~~~~~vl~~hG~~~~~-~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~ 82 (148)
++..+...+...++.|+||+.||+.+.. ..|..+++.|.+.||.|+++|+||+|.|..... ..+.....+.+.+++..
T Consensus 180 ~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~-~~d~~~~~~avld~l~~ 258 (414)
T PRK05077 180 PITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKL-TQDSSLLHQAVLNALPN 258 (414)
T ss_pred EEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCc-cccHHHHHHHHHHHHHh
Confidence 3443333333334567888878877764 457778888888999999999999998865321 13344444566667766
Q ss_pred cC--CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 83 LT--DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 83 ~~--~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
.. +.+++.++|||+||.+++.++...|++++++|+++++.
T Consensus 259 ~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~ 300 (414)
T PRK05077 259 VPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVV 300 (414)
T ss_pred CcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCcc
Confidence 53 35899999999999999999999899999999998875
No 46
>PRK05855 short chain dehydrogenase; Validated
Probab=99.73 E-value=4.5e-17 Score=123.30 Aligned_cols=115 Identities=18% Similarity=0.361 Sum_probs=90.9
Q ss_pred CceeeEEEeeCCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCC-CCCcchhhhHHHHHHHH
Q 032072 2 GEEINMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDA-NSIHSFDDYNKPLMDFM 80 (148)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~-~~~~~~~~~~~~~~~~~ 80 (148)
|.+++++..+++ .+++|||+||++++...|..+.+.|. .+|+|+++|+||+|.|+... ...++.+++++++.+++
T Consensus 12 g~~l~~~~~g~~---~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i 87 (582)
T PRK05855 12 GVRLAVYEWGDP---DRPTVVLVHGYPDNHEVWDGVAPLLA-DRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVI 87 (582)
T ss_pred CEEEEEEEcCCC---CCCeEEEEcCCCchHHHHHHHHHHhh-cceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHH
Confidence 456777666543 47899999999999999999999995 78999999999999987543 23468999999999999
Q ss_pred HhcCCCCcEEEEEeChhHHHHHHHHHh--hchhhceeeEecc
Q 032072 81 SSLTDNEKVILVGHSAGGLSITQASHK--FGNKIRLAVYLAA 120 (148)
Q Consensus 81 ~~~~~~~~i~lvG~S~Gg~~a~~~~~~--~~~~i~~~i~~~~ 120 (148)
+.+....+++++||||||.+++.++.. .++++..++.+++
T Consensus 88 ~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~ 129 (582)
T PRK05855 88 DAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSG 129 (582)
T ss_pred HHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccC
Confidence 998744569999999999999888775 2344554444443
No 47
>PRK13604 luxD acyl transferase; Provisional
Probab=99.73 E-value=2e-16 Score=110.20 Aligned_cols=118 Identities=8% Similarity=0.145 Sum_probs=85.4
Q ss_pred CceeeEEEeeCC--CCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCC-CCCCCCCCCCcch---hhhHHH
Q 032072 2 GEEINMREIKKP--AEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGS-GTDPSDANSIHSF---DDYNKP 75 (148)
Q Consensus 2 g~~~~~~~~~~~--~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~-g~s~~~~~~~~~~---~~~~~~ 75 (148)
|.++.-+...++ ..++.+.||++||++++...+..+++.|.+.||.|+.+|.+++ |.|+.... ..+. .+.+..
T Consensus 19 G~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~-~~t~s~g~~Dl~a 97 (307)
T PRK13604 19 GQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTID-EFTMSIGKNSLLT 97 (307)
T ss_pred CCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccc-cCcccccHHHHHH
Confidence 556666666553 2345689999999999887788999999999999999999887 88865431 1122 222333
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 76 LMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 76 ~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
+.++++... ..++.|+||||||.++...+... .++++|+.+|...
T Consensus 98 aid~lk~~~-~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~ 142 (307)
T PRK13604 98 VVDWLNTRG-INNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVN 142 (307)
T ss_pred HHHHHHhcC-CCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCccc
Confidence 344555443 57899999999999997777643 4888898888764
No 48
>PLN02511 hydrolase
Probab=99.73 E-value=1.1e-16 Score=116.18 Aligned_cols=106 Identities=17% Similarity=0.303 Sum_probs=78.1
Q ss_pred CCCCeEEEEccCCCCccc-h-HHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC---CCCcEE
Q 032072 16 VQKPHFVLVHGISGGAWC-W-YKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT---DNEKVI 90 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~-~-~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~ 90 (148)
..+|+||++||++++... | ..+...+.+.||+|+++|+||+|.|...... .......+++.++++.+. +..+++
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~-~~~~~~~~Dl~~~i~~l~~~~~~~~~~ 176 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQ-FYSASFTGDLRQVVDHVAGRYPSANLY 176 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcC-EEcCCchHHHHHHHHHHHHHCCCCCEE
Confidence 357899999999876543 4 3466666668999999999999988653221 222344455555555443 246899
Q ss_pred EEEeChhHHHHHHHHHhhchh--hceeeEecccc
Q 032072 91 LVGHSAGGLSITQASHKFGNK--IRLAVYLAATM 122 (148)
Q Consensus 91 lvG~S~Gg~~a~~~~~~~~~~--i~~~i~~~~~~ 122 (148)
++||||||.+++.++.+++++ +.++++++++.
T Consensus 177 lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~ 210 (388)
T PLN02511 177 AAGWSLGANILVNYLGEEGENCPLSGAVSLCNPF 210 (388)
T ss_pred EEEechhHHHHHHHHHhcCCCCCceEEEEECCCc
Confidence 999999999999999999987 88888887654
No 49
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.70 E-value=3.4e-16 Score=105.99 Aligned_cols=114 Identities=18% Similarity=0.287 Sum_probs=91.1
Q ss_pred eeEEEeeCCCCCCCCeEEEEccCCCCccchHHHHHHHHh-CCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhc
Q 032072 5 INMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMEN-SGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSL 83 (148)
Q Consensus 5 ~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~-~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~ 83 (148)
++.+...++ ....|++++.||.+.+...|..++..+.. ...+|+++|+||||.+.-......+.+.+.+++.+.++.+
T Consensus 62 ~n~Y~t~~~-~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~ 140 (343)
T KOG2564|consen 62 FNVYLTLPS-ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKEL 140 (343)
T ss_pred EEEEEecCC-CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHH
Confidence 444444443 34679999999999999999999888763 4567899999999999877666688899999999999888
Q ss_pred C--CCCcEEEEEeChhHHHHHHHHH--hhchhhceeeEecc
Q 032072 84 T--DNEKVILVGHSAGGLSITQASH--KFGNKIRLAVYLAA 120 (148)
Q Consensus 84 ~--~~~~i~lvG~S~Gg~~a~~~~~--~~~~~i~~~i~~~~ 120 (148)
. ...+|++|||||||.+|...+. ..|. +.+++.++-
T Consensus 141 fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDV 180 (343)
T KOG2564|consen 141 FGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDV 180 (343)
T ss_pred hccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEE
Confidence 4 3468999999999999988776 3455 788887764
No 50
>PRK10985 putative hydrolase; Provisional
Probab=99.70 E-value=1e-15 Score=108.85 Aligned_cols=106 Identities=22% Similarity=0.298 Sum_probs=75.1
Q ss_pred CCCCeEEEEccCCCCccc--hHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCc---chhhhHHHHHHHHHhcCCCCcEE
Q 032072 16 VQKPHFVLVHGISGGAWC--WYKVRCLMENSGYKVSCINLKGSGTDPSDANSIH---SFDDYNKPLMDFMSSLTDNEKVI 90 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~--~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~ 90 (148)
..+|+||++||++++... +..+++.|.+.||+|+++|+||+|.+.......+ ..+|....+ +.+++..+..+++
T Consensus 56 ~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i-~~l~~~~~~~~~~ 134 (324)
T PRK10985 56 RHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFL-RWLQREFGHVPTA 134 (324)
T ss_pred CCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHH-HHHHHhCCCCCEE
Confidence 356899999999876443 3467888988999999999999986643221111 223332222 3333322357899
Q ss_pred EEEeChhHHHHHHHHHhhchh--hceeeEecccc
Q 032072 91 LVGHSAGGLSITQASHKFGNK--IRLAVYLAATM 122 (148)
Q Consensus 91 lvG~S~Gg~~a~~~~~~~~~~--i~~~i~~~~~~ 122 (148)
++||||||.++..++.++++. +.++++++++.
T Consensus 135 ~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~ 168 (324)
T PRK10985 135 AVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPL 168 (324)
T ss_pred EEEecchHHHHHHHHHhhCCCCCccEEEEEcCCC
Confidence 999999999988888877654 88999998875
No 51
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.69 E-value=2e-15 Score=105.03 Aligned_cols=103 Identities=10% Similarity=0.167 Sum_probs=78.1
Q ss_pred CCCeEEEEccCCC----CccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC----CCCc
Q 032072 17 QKPHFVLVHGISG----GAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT----DNEK 88 (148)
Q Consensus 17 ~~~~vl~~hG~~~----~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 88 (148)
+++.||++||... +...+..+++.|.+.||.|+.+|++|+|.|.... .+.+++.+++.++++.+. ..++
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---~~~~~~~~d~~~~~~~l~~~~~g~~~ 101 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN---LGFEGIDADIAAAIDAFREAAPHLRR 101 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHhhCCCCCc
Confidence 4567777777553 3334566788998889999999999999986542 455666666666666652 2467
Q ss_pred EEEEEeChhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 89 VILVGHSAGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 89 i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
++++|||+||.+++.++.. +.+++++|++++...
T Consensus 102 i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 102 IVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVR 135 (274)
T ss_pred EEEEEECHHHHHHHHHhhh-CCCccEEEEECCccC
Confidence 9999999999999999765 468999999998754
No 52
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.67 E-value=6.4e-16 Score=112.55 Aligned_cols=108 Identities=14% Similarity=0.149 Sum_probs=80.1
Q ss_pred CCCCeEEEEccCCCCc--cchHH-HHHHHH--hCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC-----C
Q 032072 16 VQKPHFVLVHGISGGA--WCWYK-VRCLME--NSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT-----D 85 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~--~~~~~-~~~~l~--~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 85 (148)
.++|++|++||++++. ..|.. +.+.+. +..++|+++|++++|.+...... .+...+.+.+.++++.+. +
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~-~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA-AYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc-ccHHHHHHHHHHHHHHHHHhhCCC
Confidence 3678999999998753 34654 455443 23699999999999876543222 334555555666665441 3
Q ss_pred CCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccccC
Q 032072 86 NEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLK 124 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~~ 124 (148)
.+++.|+||||||.++..++...|+++.++++++|..|.
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 579999999999999999999999999999999997653
No 53
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.67 E-value=3.2e-16 Score=108.92 Aligned_cols=108 Identities=19% Similarity=0.275 Sum_probs=77.1
Q ss_pred CCCCeEEEEccCCCCc-cchHH-HHHHH-HhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhc-----CCCC
Q 032072 16 VQKPHFVLVHGISGGA-WCWYK-VRCLM-ENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSL-----TDNE 87 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~-~~~~~-~~~~l-~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 87 (148)
+++|++|++||++++. ..|.. +.+.+ ...+++|+++|+++++... ......+...+.+++.++++.+ .+.+
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~-y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~ 112 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPN-YPQAVNNTRVVGAELAKFLDFLVDNTGLSLE 112 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccC-hHHHHHhHHHHHHHHHHHHHHHHHhcCCChH
Confidence 4578999999999877 56654 34444 3357999999999873321 1111123344444555555444 1257
Q ss_pred cEEEEEeChhHHHHHHHHHhhchhhceeeEecccccC
Q 032072 88 KVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLK 124 (148)
Q Consensus 88 ~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~~ 124 (148)
+++++||||||.++..++.+++++++++++++|..+.
T Consensus 113 ~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 113 NVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 8999999999999999999999999999999987653
No 54
>PRK10566 esterase; Provisional
Probab=99.66 E-value=3.2e-15 Score=102.33 Aligned_cols=103 Identities=12% Similarity=0.176 Sum_probs=71.8
Q ss_pred CCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcch-------hhhHHHHHHHHH---hc--
Q 032072 16 VQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSF-------DDYNKPLMDFMS---SL-- 83 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~-------~~~~~~~~~~~~---~~-- 83 (148)
+..|+||++||++++...|..+++.|.+.||.|+++|+||+|.+...... ... .+..+++.+.++ ..
T Consensus 25 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEA-RRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccc-cchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34689999999999988898899999888999999999999875322110 111 111223322222 22
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEec
Q 032072 84 TDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLA 119 (148)
Q Consensus 84 ~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~ 119 (148)
.+.+++.++|||+||.+++.++.++|+....+++++
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 135789999999999999999988876433444443
No 55
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.66 E-value=2.5e-15 Score=94.67 Aligned_cols=94 Identities=21% Similarity=0.416 Sum_probs=74.8
Q ss_pred eEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHH
Q 032072 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGL 99 (148)
Q Consensus 20 ~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~ 99 (148)
+||++||.+++...|..+++.+.+.||.++.+|+|+++.+... ...+++.+++. +...+..+++++|||+||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~~~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA----DAVERVLADIR---AGYPDPDRIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS----HHHHHHHHHHH---HHHCTCCEEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh----HHHHHHHHHHH---hhcCCCCcEEEEEEccCcH
Confidence 5899999999999999999999999999999999999875211 12222222222 2223578999999999999
Q ss_pred HHHHHHHhhchhhceeeEeccc
Q 032072 100 SITQASHKFGNKIRLAVYLAAT 121 (148)
Q Consensus 100 ~a~~~~~~~~~~i~~~i~~~~~ 121 (148)
+++.++.+. .++++++++++.
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~~~ 94 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLSPY 94 (145)
T ss_dssp HHHHHHHHS-TTESEEEEESES
T ss_pred HHHHHhhhc-cceeEEEEecCc
Confidence 999999988 789999999983
No 56
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.64 E-value=2.8e-15 Score=107.61 Aligned_cols=115 Identities=13% Similarity=0.144 Sum_probs=82.1
Q ss_pred eeEEEeeCCC-CCCCCeEEEEccCCCCccc-----hHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHH-HH
Q 032072 5 INMREIKKPA-EVQKPHFVLVHGISGGAWC-----WYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKP-LM 77 (148)
Q Consensus 5 ~~~~~~~~~~-~~~~~~vl~~hG~~~~~~~-----~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~-~~ 77 (148)
+.++.+.+.. ...+++|+++||+..+... +..+++.|.+.||+|+++|++++|.+... .+.+++.++ +.
T Consensus 48 ~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~----~~~~d~~~~~~~ 123 (350)
T TIGR01836 48 VVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY----LTLDDYINGYID 123 (350)
T ss_pred EEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc----CCHHHHHHHHHH
Confidence 3444454332 2345689999998654433 35789999989999999999998876433 344444322 32
Q ss_pred HHHH---hcCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 78 DFMS---SLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 78 ~~~~---~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
+.++ ...+.++++++||||||.+++.++..+|++++++++++++..
T Consensus 124 ~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 124 KCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVD 172 (350)
T ss_pred HHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccc
Confidence 2222 222367999999999999999999999999999999998763
No 57
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.62 E-value=1.8e-14 Score=96.73 Aligned_cols=109 Identities=11% Similarity=0.117 Sum_probs=75.0
Q ss_pred CCCCCeEEEEccCCCCccchH---HHHHHHHhCCcEEEEEecCCCCCCCCCC---------CCCcchhhhHHHHHHHHHh
Q 032072 15 EVQKPHFVLVHGISGGAWCWY---KVRCLMENSGYKVSCINLKGSGTDPSDA---------NSIHSFDDYNKPLMDFMSS 82 (148)
Q Consensus 15 ~~~~~~vl~~hG~~~~~~~~~---~~~~~l~~~~~~v~~~d~~g~g~s~~~~---------~~~~~~~~~~~~~~~~~~~ 82 (148)
.++.|+||++||.+++...+. .+.+.+.+.|+.|+++|.+|++.+.... .......+..+.+..+.+.
T Consensus 10 ~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 89 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKAN 89 (212)
T ss_pred CCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHh
Confidence 456799999999998776654 3555566689999999999976432110 0001122222222322222
Q ss_pred cC-CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 83 LT-DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 83 ~~-~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
.. +.++++++|||+||.+++.++.++|+.+.+++.+++...
T Consensus 90 ~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 90 YSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred cCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 22 246899999999999999999999999999988887653
No 58
>PRK11071 esterase YqiA; Provisional
Probab=99.62 E-value=7.8e-15 Score=96.89 Aligned_cols=88 Identities=18% Similarity=0.190 Sum_probs=71.7
Q ss_pred CeEEEEccCCCCccchHH--HHHHHHh--CCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEe
Q 032072 19 PHFVLVHGISGGAWCWYK--VRCLMEN--SGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGH 94 (148)
Q Consensus 19 ~~vl~~hG~~~~~~~~~~--~~~~l~~--~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~ 94 (148)
|+||++||++++...|.. +.+.+.+ .+++++++|+||++ ++.++.+.++++.+. .++++++||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~~-~~~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEHG-GDPLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHcC-CCCeEEEEE
Confidence 579999999999998874 4456654 37999999999873 357778888888876 679999999
Q ss_pred ChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 95 SAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 95 S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
||||.+++.++.++|. ++++++++.
T Consensus 69 S~Gg~~a~~~a~~~~~---~~vl~~~~~ 93 (190)
T PRK11071 69 SLGGYYATWLSQCFML---PAVVVNPAV 93 (190)
T ss_pred CHHHHHHHHHHHHcCC---CEEEECCCC
Confidence 9999999999999883 467787764
No 59
>PLN00021 chlorophyllase
Probab=99.61 E-value=1.8e-14 Score=101.74 Aligned_cols=110 Identities=16% Similarity=0.141 Sum_probs=78.1
Q ss_pred CCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhc------CC
Q 032072 12 KPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSL------TD 85 (148)
Q Consensus 12 ~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~------~~ 85 (148)
+...+..|+|+++||++.+...|..+++.|.+.||.|+++|+++++.... .....+..+..+.+.+.++.+ .+
T Consensus 46 P~~~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~-~~~i~d~~~~~~~l~~~l~~~l~~~~~~d 124 (313)
T PLN00021 46 PSEAGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDG-TDEIKDAAAVINWLSSGLAAVLPEGVRPD 124 (313)
T ss_pred CCCCCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCc-hhhHHHHHHHHHHHHhhhhhhcccccccC
Confidence 33445679999999999998889999999998899999999998643211 111112223333333322221 12
Q ss_pred CCcEEEEEeChhHHHHHHHHHhhch-----hhceeeEecccc
Q 032072 86 NEKVILVGHSAGGLSITQASHKFGN-----KIRLAVYLAATM 122 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~~~-----~i~~~i~~~~~~ 122 (148)
.++++++|||+||.+++.++..+++ ++.+++++++..
T Consensus 125 ~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 125 LSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred hhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 4689999999999999999998774 578888888753
No 60
>PLN02872 triacylglycerol lipase
Probab=99.59 E-value=1.1e-14 Score=105.66 Aligned_cols=122 Identities=19% Similarity=0.323 Sum_probs=87.4
Q ss_pred CceeeEEEeeCCC----CCCCCeEEEEccCCCCccchH------HHHHHHHhCCcEEEEEecCCCCCCCCCC----C---
Q 032072 2 GEEINMREIKKPA----EVQKPHFVLVHGISGGAWCWY------KVRCLMENSGYKVSCINLKGSGTDPSDA----N--- 64 (148)
Q Consensus 2 g~~~~~~~~~~~~----~~~~~~vl~~hG~~~~~~~~~------~~~~~l~~~~~~v~~~d~~g~g~s~~~~----~--- 64 (148)
|..+.+.++..+. ...+++|+++||+.++...|. .++..|.+.||+|+.+|.||++.+.... .
T Consensus 54 Gy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~ 133 (395)
T PLN02872 54 GYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKE 133 (395)
T ss_pred CcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchh
Confidence 6677777775332 124689999999998887763 3555688889999999999986543211 0
Q ss_pred -CCcchhhhH-HHHHHHHHhcC--CCCcEEEEEeChhHHHHHHHHHhhch---hhceeeEecccccC
Q 032072 65 -SIHSFDDYN-KPLMDFMSSLT--DNEKVILVGHSAGGLSITQASHKFGN---KIRLAVYLAATMLK 124 (148)
Q Consensus 65 -~~~~~~~~~-~~~~~~~~~~~--~~~~i~lvG~S~Gg~~a~~~~~~~~~---~i~~~i~~~~~~~~ 124 (148)
-.+++++.+ .++.++++.+. ..+++.++||||||.+++.++ ..|+ +|+.+++++|....
T Consensus 134 fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~ 199 (395)
T PLN02872 134 FWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYL 199 (395)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhh
Confidence 124666666 57777777652 147999999999999998655 4565 68888888887644
No 61
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.59 E-value=1.4e-14 Score=82.23 Aligned_cols=79 Identities=27% Similarity=0.459 Sum_probs=69.6
Q ss_pred CceeeEEEeeCCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHH
Q 032072 2 GEEINMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMS 81 (148)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~ 81 (148)
|.++.++.+.++.+ .+.+|+++||++.....|..+++.|.+.||.|+++|+||+|.|........+++++.+++..+++
T Consensus 1 G~~L~~~~w~p~~~-~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENP-PKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCC-CCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 67888888877655 68899999999999999999999999999999999999999999777666788999999988763
No 62
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.59 E-value=2.7e-14 Score=103.51 Aligned_cols=119 Identities=9% Similarity=0.099 Sum_probs=89.5
Q ss_pred ceeeEEEeeCCCCCCCCeEEEEccCCCCccch---------HHHHHHH-------HhCCcEEEEEecCCCCCCCCC----
Q 032072 3 EEINMREIKKPAEVQKPHFVLVHGISGGAWCW---------YKVRCLM-------ENSGYKVSCINLKGSGTDPSD---- 62 (148)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~---------~~~~~~l-------~~~~~~v~~~d~~g~g~s~~~---- 62 (148)
.++.|..++.....+..+||++|+++++.... ..|.+.+ --..|.|+++|..|.+.|+.+
T Consensus 41 ~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~ 120 (389)
T PRK06765 41 VQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVIT 120 (389)
T ss_pred ceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCC
Confidence 46788888876555678999999999854221 1122333 224689999999987542110
Q ss_pred -------C---------CCCcchhhhHHHHHHHHHhcCCCCcEE-EEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 63 -------A---------NSIHSFDDYNKPLMDFMSSLTDNEKVI-LVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 63 -------~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~-lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+ ....++.++++++.++++.+. .+++. ++||||||.+++.++.++|++++++|++++..
T Consensus 121 tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lg-i~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~ 196 (389)
T PRK06765 121 TGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLG-IARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNP 196 (389)
T ss_pred CCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcC-CCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCC
Confidence 1 112678999999999999887 67775 99999999999999999999999999998764
No 63
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.57 E-value=1.1e-13 Score=96.11 Aligned_cols=106 Identities=20% Similarity=0.373 Sum_probs=90.6
Q ss_pred CCCCCeEEEEccCCCCccchHHHHHHHHh-CCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC---CCCcEE
Q 032072 15 EVQKPHFVLVHGISGGAWCWYKVRCLMEN-SGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT---DNEKVI 90 (148)
Q Consensus 15 ~~~~~~vl~~hG~~~~~~~~~~~~~~l~~-~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~ 90 (148)
.++.|+++++||+.++...|..+...|.. .+-.++.+|.|.||.|.... ..+..++++++..+++... ...++.
T Consensus 49 ~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~--~h~~~~ma~dv~~Fi~~v~~~~~~~~~~ 126 (315)
T KOG2382|consen 49 LERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT--VHNYEAMAEDVKLFIDGVGGSTRLDPVV 126 (315)
T ss_pred cCCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc--ccCHHHHHHHHHHHHHHcccccccCCce
Confidence 45789999999999999999999998874 46789999999999987553 3678999999999999885 257899
Q ss_pred EEEeChhH-HHHHHHHHhhchhhceeeEecccc
Q 032072 91 LVGHSAGG-LSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 91 lvG~S~Gg-~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
++|||||| .+++..+...|..+.++|.++-+.
T Consensus 127 l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP 159 (315)
T KOG2382|consen 127 LLGHSMGGVKVAMAETLKKPDLIERLIVEDISP 159 (315)
T ss_pred ecccCcchHHHHHHHHHhcCcccceeEEEecCC
Confidence 99999999 777777888899999999987544
No 64
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.57 E-value=1.1e-13 Score=93.58 Aligned_cols=111 Identities=14% Similarity=0.161 Sum_probs=74.4
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHHh--------CCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhc----C
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLMEN--------SGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSL----T 84 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~~--------~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~----~ 84 (148)
++.+|||+||.+++..+++.++..+.+ ..++++..|+......-.......+.+...+.+..+++.. .
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~~ 82 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNRP 82 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhccC
Confidence 578999999999998888887766631 2577888887754222111111112222333344443333 3
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhhc---hhhceeeEecccccCCCC
Q 032072 85 DNEKVILVGHSAGGLSITQASHKFG---NKIRLAVYLAATMLKLGF 127 (148)
Q Consensus 85 ~~~~i~lvG~S~Gg~~a~~~~~~~~---~~i~~~i~~~~~~~~~~~ 127 (148)
+.+++++|||||||.++..++...+ +.++.+|.+++|......
T Consensus 83 ~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~~ 128 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSPL 128 (225)
T ss_pred CCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCccc
Confidence 4689999999999999999987543 479999999998865543
No 65
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.57 E-value=2e-14 Score=96.57 Aligned_cols=75 Identities=23% Similarity=0.370 Sum_probs=68.0
Q ss_pred cEEEEEecCCCCCCCC---CCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEeccc
Q 032072 46 YKVSCINLKGSGTDPS---DANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAAT 121 (148)
Q Consensus 46 ~~v~~~d~~g~g~s~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~ 121 (148)
|+|+++|+||+|.|++ ......+.++.++++..+++.+. .++++++||||||.+++.++.++|++++++++++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALG-IKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHT-TSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhC-CCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 6899999999999986 44456788999999999999988 677999999999999999999999999999999986
No 66
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.57 E-value=1.8e-13 Score=95.25 Aligned_cols=120 Identities=14% Similarity=0.165 Sum_probs=79.4
Q ss_pred ceeeEEEeeCCC--CCCCCeEEEEccCCCCccchHHH--HHHH-HhCCcEEEEEecC--CCCCCCCC-------------
Q 032072 3 EEINMREIKKPA--EVQKPHFVLVHGISGGAWCWYKV--RCLM-ENSGYKVSCINLK--GSGTDPSD------------- 62 (148)
Q Consensus 3 ~~~~~~~~~~~~--~~~~~~vl~~hG~~~~~~~~~~~--~~~l-~~~~~~v~~~d~~--g~g~s~~~------------- 62 (148)
..+.+..+.++. .++.|+|+++||.+++...|... ...+ .+.|+.|+++|.. |++.+...
T Consensus 25 ~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~ 104 (275)
T TIGR02821 25 VPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYV 104 (275)
T ss_pred CceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccc
Confidence 344455554432 33568999999999988877532 2333 4468999999984 44322110
Q ss_pred --C----CCCcchh-hhHHHHHHHHHhc--CCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 63 --A----NSIHSFD-DYNKPLMDFMSSL--TDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 63 --~----~~~~~~~-~~~~~~~~~~~~~--~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
. ....... ...+++..+++.. .+.+++.++||||||.+++.++.++|+.+++++++++..
T Consensus 105 d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 105 DATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred cCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 0 0011222 2345565666652 135789999999999999999999999999999988765
No 67
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.56 E-value=2.2e-13 Score=92.93 Aligned_cols=106 Identities=20% Similarity=0.246 Sum_probs=95.5
Q ss_pred CCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChh
Q 032072 18 KPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAG 97 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~G 97 (148)
..+||-+||.+|+..+|..+...|.+.|.+++.+++||+|.++......++..+...-+.++++.+.-.++++.+|||.|
T Consensus 35 ~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrG 114 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRG 114 (297)
T ss_pred ceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEeccc
Confidence 34899999999999999999999999999999999999999988877778888888889999999987789999999999
Q ss_pred HHHHHHHHHhhchhhceeeEecccccCC
Q 032072 98 GLSITQASHKFGNKIRLAVYLAATMLKL 125 (148)
Q Consensus 98 g~~a~~~~~~~~~~i~~~i~~~~~~~~~ 125 (148)
+-.++.++..+| ..++++++|+-...
T Consensus 115 cenal~la~~~~--~~g~~lin~~G~r~ 140 (297)
T PF06342_consen 115 CENALQLAVTHP--LHGLVLINPPGLRP 140 (297)
T ss_pred hHHHHHHHhcCc--cceEEEecCCcccc
Confidence 999999999885 67999999876433
No 68
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.56 E-value=4.5e-14 Score=106.76 Aligned_cols=119 Identities=13% Similarity=0.083 Sum_probs=86.4
Q ss_pred CceeeEEEeeCCCCCCCCeEEEEccCCCCcc---ch-HHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHH
Q 032072 2 GEEINMREIKKPAEVQKPHFVLVHGISGGAW---CW-YKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLM 77 (148)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~---~~-~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~ 77 (148)
|.+++...+.+...++.|+||++||++.... .+ ......+.+.||.|+.+|.||+|.|+..... .+ .+.++++.
T Consensus 6 G~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~-~~-~~~~~D~~ 83 (550)
T TIGR00976 6 GTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDL-LG-SDEAADGY 83 (550)
T ss_pred CCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEe-cC-cccchHHH
Confidence 5677766565544456799999999987542 12 2344567778999999999999998765322 11 34455555
Q ss_pred HHHHhcC----CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 78 DFMSSLT----DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 78 ~~~~~~~----~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
++++.+. ...+|.++|+|+||.+++.++..+|..+++++..++..
T Consensus 84 ~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 84 DLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred HHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 5555442 23699999999999999999999999999999887764
No 69
>PLN02442 S-formylglutathione hydrolase
Probab=99.54 E-value=3.3e-13 Score=94.31 Aligned_cols=121 Identities=16% Similarity=0.168 Sum_probs=80.5
Q ss_pred CceeeEEEeeCCC--CCCCCeEEEEccCCCCccchHH---HHHHHHhCCcEEEEEecCCCCCCCC---------------
Q 032072 2 GEEINMREIKKPA--EVQKPHFVLVHGISGGAWCWYK---VRCLMENSGYKVSCINLKGSGTDPS--------------- 61 (148)
Q Consensus 2 g~~~~~~~~~~~~--~~~~~~vl~~hG~~~~~~~~~~---~~~~l~~~~~~v~~~d~~g~g~s~~--------------- 61 (148)
|.++.+..+-++. .+..|+|+++||++++...|.. +.+.+...|+.|+.+|..++|....
T Consensus 29 ~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~ 108 (283)
T PLN02442 29 GCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFY 108 (283)
T ss_pred CCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCccee
Confidence 5566665554432 2356899999999988776644 3355566799999999875541100
Q ss_pred ---CCCC-------CcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 62 ---DANS-------IHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 62 ---~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
.... .+-.++..+.+.+..+.+. .++++++||||||.+++.++.++|+++++++.+++...
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~-~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 109 LNATQEKWKNWRMYDYVVKELPKLLSDNFDQLD-TSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred eccccCCCcccchhhhHHHHHHHHHHHHHHhcC-CCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 0000 0112233333344444444 67899999999999999999999999999999988753
No 70
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.53 E-value=3.1e-13 Score=101.02 Aligned_cols=117 Identities=15% Similarity=0.156 Sum_probs=82.5
Q ss_pred eeEEEeeCCCC-CCCCeEEEEccCCCCccchH-----HHHHHHHhCCcEEEEEecCCCCCCCCCCCCC-cchhhhHHHHH
Q 032072 5 INMREIKKPAE-VQKPHFVLVHGISGGAWCWY-----KVRCLMENSGYKVSCINLKGSGTDPSDANSI-HSFDDYNKPLM 77 (148)
Q Consensus 5 ~~~~~~~~~~~-~~~~~vl~~hG~~~~~~~~~-----~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~-~~~~~~~~~~~ 77 (148)
+.++.+.+.++ ..+++||++||+......+. .+.+.|.+.||+|+++|++++|.+....... +..+...+.+.
T Consensus 174 ~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~ 253 (532)
T TIGR01838 174 FQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALE 253 (532)
T ss_pred EEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHH
Confidence 34445544433 35789999999987777664 6899999899999999999999875543211 22223444455
Q ss_pred HHHHhcCCCCcEEEEEeChhHHHHH----HHHHhh-chhhceeeEecccc
Q 032072 78 DFMSSLTDNEKVILVGHSAGGLSIT----QASHKF-GNKIRLAVYLAATM 122 (148)
Q Consensus 78 ~~~~~~~~~~~i~lvG~S~Gg~~a~----~~~~~~-~~~i~~~i~~~~~~ 122 (148)
.+.+.+. .+++.++||||||.++. .++... +++++++++++++.
T Consensus 254 ~v~~~~g-~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~ 302 (532)
T TIGR01838 254 VVEAITG-EKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLL 302 (532)
T ss_pred HHHHhcC-CCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCc
Confidence 5544444 78999999999999852 234444 77899999999875
No 71
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.52 E-value=2.6e-13 Score=91.86 Aligned_cols=103 Identities=13% Similarity=0.196 Sum_probs=85.3
Q ss_pred CeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhH
Q 032072 19 PHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGG 98 (148)
Q Consensus 19 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg 98 (148)
++|+|+|+.+++...|..+++.+....+.|+.++.+|.+.... ...+++++++...+.+....+..++.++|||+||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~---~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEP---PPDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSH---EESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCC---CCCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 3799999999999999999999983238999999999873222 2378899999998888887755699999999999
Q ss_pred HHHHHHHHhhch---hhceeeEecccccC
Q 032072 99 LSITQASHKFGN---KIRLAVYLAATMLK 124 (148)
Q Consensus 99 ~~a~~~~~~~~~---~i~~~i~~~~~~~~ 124 (148)
.+|+.+|.+..+ .+..+++++++.+.
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~p~ 106 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPPPS 106 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSSTT
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCCCC
Confidence 999999996643 58899999976653
No 72
>PRK11460 putative hydrolase; Provisional
Probab=99.52 E-value=2.2e-13 Score=92.63 Aligned_cols=110 Identities=9% Similarity=0.126 Sum_probs=71.7
Q ss_pred CCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCC----------CCCCc---chhhhHHHHHHH
Q 032072 13 PAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSD----------ANSIH---SFDDYNKPLMDF 79 (148)
Q Consensus 13 ~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~----------~~~~~---~~~~~~~~~~~~ 79 (148)
+..+.++.||++||++++...|..+++.|.+.++.+..++.++....... ..... ++.+..+.+.+.
T Consensus 11 ~~~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (232)
T PRK11460 11 PDKPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIET 90 (232)
T ss_pred CCCCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHH
Confidence 34456789999999999999999999999865554445544443211100 00001 122222333333
Q ss_pred HHh----cC-CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 80 MSS----LT-DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 80 ~~~----~~-~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
++. .. +.++++++|||+||.+++.++.++|+.+.+++.+++..
T Consensus 91 i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~ 138 (232)
T PRK11460 91 VRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRY 138 (232)
T ss_pred HHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccc
Confidence 333 22 24689999999999999999998898888888777653
No 73
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.51 E-value=7.1e-13 Score=89.53 Aligned_cols=102 Identities=29% Similarity=0.476 Sum_probs=81.4
Q ss_pred CCeEEEEccCCCCccchHHHHHHHHhC--CcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeC
Q 032072 18 KPHFVLVHGISGGAWCWYKVRCLMENS--GYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHS 95 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~~~~~~~~~l~~~--~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S 95 (148)
.++++++||++++...|......+... .|+++.+|+||+|.|. .. .......++++..+++.+. ..+++++|||
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~~~~~~-~~~~~l~G~S 96 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLAALLDALG-LEKVVLVGHS 96 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHHHHHHHhC-CCceEEEEec
Confidence 559999999999988887733333321 2899999999999987 11 2344444788888888877 5669999999
Q ss_pred hhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 96 AGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 96 ~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
+||.+++.++.++|+++++++++++...
T Consensus 97 ~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 97 MGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred ccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 9999999999999999999999997653
No 74
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.50 E-value=2.7e-13 Score=97.55 Aligned_cols=108 Identities=18% Similarity=0.294 Sum_probs=77.1
Q ss_pred CCCCCCeEEEEccCCCCccchHHHH-HHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC--CCCcEE
Q 032072 14 AEVQKPHFVLVHGISGGAWCWYKVR-CLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT--DNEKVI 90 (148)
Q Consensus 14 ~~~~~~~vl~~hG~~~~~~~~~~~~-~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~ 90 (148)
..+..|+||++.|+-+...++..+. +.+...|+.++++|.||.|.|...... .+.....+.+.+.+...+ +..+|.
T Consensus 186 ~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~D~~~l~~aVLd~L~~~p~VD~~RV~ 264 (411)
T PF06500_consen 186 GEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-QDSSRLHQAVLDYLASRPWVDHTRVG 264 (411)
T ss_dssp SSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S-CCHHHHHHHHHHHHSTTEEEEEEE
T ss_pred CCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-cCHHHHHHHHHHHHhcCCccChhheE
Confidence 4455688999999999888776654 557779999999999999988644322 344566778888888876 356999
Q ss_pred EEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 91 LVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 91 lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
++|.|+||+++.++|...+.+++++|.++++.
T Consensus 265 ~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~v 296 (411)
T PF06500_consen 265 AWGFSFGGYYAVRLAALEDPRLKAVVALGAPV 296 (411)
T ss_dssp EEEETHHHHHHHHHHHHTTTT-SEEEEES---
T ss_pred EEEeccchHHHHHHHHhcccceeeEeeeCchH
Confidence 99999999999999998888999999999875
No 75
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.46 E-value=9.8e-13 Score=101.52 Aligned_cols=92 Identities=23% Similarity=0.249 Sum_probs=72.2
Q ss_pred CCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCC---------CCC-------------CcchhhhHHH
Q 032072 18 KPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSD---------ANS-------------IHSFDDYNKP 75 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~---------~~~-------------~~~~~~~~~~ 75 (148)
.|+|+++||++++...|..+++.|.+.||+|+++|+||||.+... ... ..++++.+.+
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~D 528 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILD 528 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHH
Confidence 469999999999999999999999888999999999999988332 100 1256666666
Q ss_pred HHHHHHhcC---------------CCCcEEEEEeChhHHHHHHHHHhhc
Q 032072 76 LMDFMSSLT---------------DNEKVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 76 ~~~~~~~~~---------------~~~~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
+..+...+. +..+++++||||||+++..++....
T Consensus 529 ll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~an 577 (792)
T TIGR03502 529 LLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYAN 577 (792)
T ss_pred HHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhcC
Confidence 655554443 1468999999999999999998644
No 76
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.45 E-value=3.3e-12 Score=88.49 Aligned_cols=119 Identities=20% Similarity=0.334 Sum_probs=97.2
Q ss_pred CCeEEEEccCCCCccchHHHHHHHHh---CCcEEEEEecCCCCCCCCC-----CCCCcchhhhHHHHHHHHHhcC-----
Q 032072 18 KPHFVLVHGISGGAWCWYKVRCLMEN---SGYKVSCINLKGSGTDPSD-----ANSIHSFDDYNKPLMDFMSSLT----- 84 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~~~~~~~~~l~~---~~~~v~~~d~~g~g~s~~~-----~~~~~~~~~~~~~~~~~~~~~~----- 84 (148)
+..+++++|..|-...|..+.+.|.+ ..+.|+++...||..+... ....++.+++.+...++++++.
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 46799999999999999999888874 4789999999999766544 3355888999988888887763
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhhc---hhhceeeEecccccCCCCcchHHHHHH
Q 032072 85 DNEKVILVGHSAGGLSITQASHKFG---NKIRLAVYLAATMLKLGFCTDEDVKIR 136 (148)
Q Consensus 85 ~~~~i~lvG~S~Gg~~a~~~~~~~~---~~i~~~i~~~~~~~~~~~~~~~~~~~~ 136 (148)
+..+++++|||.|++++++++.+.+ .+|.+++++-|+......+.......+
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~G~~l~~ 136 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPNGRRLTP 136 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCchhHHHHH
Confidence 3578999999999999999999999 689999999999876666655544443
No 77
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.44 E-value=3.4e-12 Score=86.02 Aligned_cols=104 Identities=13% Similarity=0.218 Sum_probs=86.0
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHHh-CCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC-CCCcEEEEEe
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLMEN-SGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT-DNEKVILVGH 94 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~~-~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~lvG~ 94 (148)
..+++++.||...+..+...+...|.. ..++++.+|++|+|.|+..+.. .+..+..+++-+.+++.. ..++++|.|+
T Consensus 59 ~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE-~n~y~Di~avye~Lr~~~g~~~~Iil~G~ 137 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE-RNLYADIKAVYEWLRNRYGSPERIILYGQ 137 (258)
T ss_pred cceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCccc-ccchhhHHHHHHHHHhhcCCCceEEEEEe
Confidence 458999999997777766666666653 4789999999999999887754 467777777777777766 4789999999
Q ss_pred ChhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 95 SAGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 95 S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
|+|...++.+|.+.| +.++|+.+|...
T Consensus 138 SiGt~~tv~Lasr~~--~~alVL~SPf~S 164 (258)
T KOG1552|consen 138 SIGTVPTVDLASRYP--LAAVVLHSPFTS 164 (258)
T ss_pred cCCchhhhhHhhcCC--cceEEEeccchh
Confidence 999999999999998 999999998874
No 78
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.44 E-value=1.6e-12 Score=104.15 Aligned_cols=114 Identities=21% Similarity=0.269 Sum_probs=83.0
Q ss_pred eeEEEeeCCC-----CCCCCeEEEEccCCCCccchHHH-----HHHHHhCCcEEEEEecCCCCCCCCCCC-CCcchhhhH
Q 032072 5 INMREIKKPA-----EVQKPHFVLVHGISGGAWCWYKV-----RCLMENSGYKVSCINLKGSGTDPSDAN-SIHSFDDYN 73 (148)
Q Consensus 5 ~~~~~~~~~~-----~~~~~~vl~~hG~~~~~~~~~~~-----~~~l~~~~~~v~~~d~~g~g~s~~~~~-~~~~~~~~~ 73 (148)
+.++.+.+.. +..+++||++||+..+...|... .+.|.+.||+|+++|+ |.++.... ...++.+.+
T Consensus 49 ~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i 125 (994)
T PRK07868 49 YRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHV 125 (994)
T ss_pred EEEEEeCCCCccccccCCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHH
Confidence 3455554433 23568999999999999988754 7888888999999995 44433221 125666776
Q ss_pred HHHHHHHHhc---CCCCcEEEEEeChhHHHHHHHHHhh-chhhceeeEecccc
Q 032072 74 KPLMDFMSSL---TDNEKVILVGHSAGGLSITQASHKF-GNKIRLAVYLAATM 122 (148)
Q Consensus 74 ~~~~~~~~~~---~~~~~i~lvG~S~Gg~~a~~~~~~~-~~~i~~~i~~~~~~ 122 (148)
..+.+.++.+ . .+++.++||||||.+++.++..+ +++++++++++++.
T Consensus 126 ~~l~~~l~~v~~~~-~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~ 177 (994)
T PRK07868 126 VALSEAIDTVKDVT-GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPV 177 (994)
T ss_pred HHHHHHHHHHHHhh-CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccc
Confidence 6666666542 3 46899999999999999998754 55899999988774
No 79
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.41 E-value=5.2e-13 Score=86.98 Aligned_cols=118 Identities=16% Similarity=0.171 Sum_probs=89.2
Q ss_pred CceeeEEEeeCCCCCCCCeEEEEccCCC-CccchHHHHHHHHh-CCcEEEEEecCCCCCCCCCCCC--CcchhhhHHHHH
Q 032072 2 GEEINMREIKKPAEVQKPHFVLVHGISG-GAWCWYKVRCLMEN-SGYKVSCINLKGSGTDPSDANS--IHSFDDYNKPLM 77 (148)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~vl~~hG~~~-~~~~~~~~~~~l~~-~~~~v~~~d~~g~g~s~~~~~~--~~~~~~~~~~~~ 77 (148)
|.+++|..++. ....|++++|.-+ ....|......+-. ..+.++++|.||+|.|.++... .....+.++...
T Consensus 30 g~ql~y~~~G~----G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~av 105 (277)
T KOG2984|consen 30 GTQLGYCKYGH----GPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAV 105 (277)
T ss_pred CceeeeeecCC----CCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHH
Confidence 34555555543 3447888888765 56678776666654 3489999999999999776532 123345566677
Q ss_pred HHHHhcCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccccC
Q 032072 78 DFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLK 124 (148)
Q Consensus 78 ~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~~ 124 (148)
++++.+. .+++.++|+|-||..++..|.++++.|+++++.++....
T Consensus 106 dLM~aLk-~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayv 151 (277)
T KOG2984|consen 106 DLMEALK-LEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYV 151 (277)
T ss_pred HHHHHhC-CCCeeEeeecCCCeEEEEeeccChhhhhhheeeccccee
Confidence 7888887 799999999999999999999999999999999887643
No 80
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.40 E-value=1.5e-12 Score=87.60 Aligned_cols=116 Identities=15% Similarity=0.177 Sum_probs=67.4
Q ss_pred EeeCCCCCCCCeEEEEccCCCCccchHHHHH-HHHhCCcEEEEEecCC------CCC---CC-----CCCC---CCcchh
Q 032072 9 EIKKPAEVQKPHFVLVHGISGGAWCWYKVRC-LMENSGYKVSCINLKG------SGT---DP-----SDAN---SIHSFD 70 (148)
Q Consensus 9 ~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~-~l~~~~~~v~~~d~~g------~g~---s~-----~~~~---~~~~~~ 70 (148)
.+..+..+..++||++||+|++...+..... .+......++.++-|. .|. +. .... ....+.
T Consensus 5 ~i~~~~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~ 84 (216)
T PF02230_consen 5 RIIEPKGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIE 84 (216)
T ss_dssp EEE--SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHH
T ss_pred EEeCCCCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHH
Confidence 3445566678999999999999976665554 2222456666665431 121 11 0010 112333
Q ss_pred hhHHHHHHHHHhc----CCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccccC
Q 032072 71 DYNKPLMDFMSSL----TDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLK 124 (148)
Q Consensus 71 ~~~~~~~~~~~~~----~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~~ 124 (148)
+..+.+.++++.. -+.+++++.|+|+||.+++.++.++|+.+.+++.+++..+.
T Consensus 85 ~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~ 142 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPP 142 (216)
T ss_dssp HHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TT
T ss_pred HHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccc
Confidence 4444555555543 24579999999999999999999999999999999998754
No 81
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.38 E-value=2.7e-11 Score=84.42 Aligned_cols=118 Identities=19% Similarity=0.325 Sum_probs=78.1
Q ss_pred eeEEEeeCCCCCCCCeEEEEccCCCCcc-ch-HHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCc--chhhhHHHHHHHH
Q 032072 5 INMREIKKPAEVQKPHFVLVHGISGGAW-CW-YKVRCLMENSGYKVSCINLKGSGTDPSDANSIH--SFDDYNKPLMDFM 80 (148)
Q Consensus 5 ~~~~~~~~~~~~~~~~vl~~hG~~~~~~-~~-~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~--~~~~~~~~~~~~~ 80 (148)
+..-+..++....+|.||++||+.|+.. .| ..+.+.+.+.||.++++++||++.+.......+ ...+....+.+.+
T Consensus 62 ~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l 141 (345)
T COG0429 62 IDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWL 141 (345)
T ss_pred EEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHH
Confidence 3344444455666789999999987543 34 457888999999999999999987655332111 2223333334444
Q ss_pred HhcCCCCcEEEEEeChhHHHHHHHHHhhch--hhceeeEecccc
Q 032072 81 SSLTDNEKVILVGHSAGGLSITQASHKFGN--KIRLAVYLAATM 122 (148)
Q Consensus 81 ~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~--~i~~~i~~~~~~ 122 (148)
+......++..+|+|+||.+...+..+..+ .+.+.+.++.|.
T Consensus 142 ~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~ 185 (345)
T COG0429 142 KARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPF 185 (345)
T ss_pred HHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHH
Confidence 444557899999999999777666665433 456666666554
No 82
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.36 E-value=4.4e-11 Score=85.87 Aligned_cols=121 Identities=18% Similarity=0.341 Sum_probs=80.3
Q ss_pred CceeeEEEeeCCCC------CCCCeEEEEccCCCCccc-h-HHHHHHHHhCCcEEEEEecCCCCCCCCCCCCC--cchhh
Q 032072 2 GEEINMREIKKPAE------VQKPHFVLVHGISGGAWC-W-YKVRCLMENSGYKVSCINLKGSGTDPSDANSI--HSFDD 71 (148)
Q Consensus 2 g~~~~~~~~~~~~~------~~~~~vl~~hG~~~~~~~-~-~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~--~~~~~ 71 (148)
|.++.+-++.++.. ...|+||++||+.+++.. | ..+...+++.||+|++++.||.+.+.-..+-. ....+
T Consensus 103 GG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~ 182 (409)
T KOG1838|consen 103 GGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTE 182 (409)
T ss_pred CCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHH
Confidence 34454545544332 456999999999875543 3 35677777899999999999988765433211 22223
Q ss_pred hHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhch--hhceeeEecccc
Q 032072 72 YNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGN--KIRLAVYLAATM 122 (148)
Q Consensus 72 ~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~--~i~~~i~~~~~~ 122 (148)
..+.+.+.++...+..++..+|+||||.+.+.|+.+-.+ .+.+.+.++.+.
T Consensus 183 Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 183 DLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPW 235 (409)
T ss_pred HHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccc
Confidence 333334444444457899999999999999999987654 355556665554
No 83
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.36 E-value=1.9e-11 Score=83.64 Aligned_cols=101 Identities=17% Similarity=0.275 Sum_probs=88.3
Q ss_pred CeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhH
Q 032072 19 PHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGG 98 (148)
Q Consensus 19 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg 98 (148)
++++++|+.+|....|..+...+. ....|+..+.++.+..... ..+++++++...+.+.+..+..++.|+|||+||
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~-~~~~v~~l~a~g~~~~~~~---~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG 76 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALG-PLLPVYGLQAPGYGAGEQP---FASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGG 76 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhc-cCceeeccccCcccccccc---cCCHHHHHHHHHHHHHHhCCCCCEEEEeecccc
Confidence 589999999999999999999998 4589999999998753333 278899999999999999888999999999999
Q ss_pred HHHHHHHHhh---chhhceeeEeccccc
Q 032072 99 LSITQASHKF---GNKIRLAVYLAATML 123 (148)
Q Consensus 99 ~~a~~~~~~~---~~~i~~~i~~~~~~~ 123 (148)
.++..+|.+. .+.|..+++++++.+
T Consensus 77 ~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 77 AVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999866 347999999998876
No 84
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.35 E-value=1.8e-11 Score=86.39 Aligned_cols=119 Identities=14% Similarity=0.247 Sum_probs=88.8
Q ss_pred ceeeEEEeeCCCCCCCCeEEEEccCCCCccchH-------HHHHHHHhC-------CcEEEEEecCCCC--CCCC---CC
Q 032072 3 EEINMREIKKPAEVQKPHFVLVHGISGGAWCWY-------KVRCLMENS-------GYKVSCINLKGSG--TDPS---DA 63 (148)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~-------~~~~~l~~~-------~~~v~~~d~~g~g--~s~~---~~ 63 (148)
..+.|..++........+|+++|+++++..... .|.+.+... .|.|++.|..|.. .+.+ .+
T Consensus 36 ~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p 115 (368)
T COG2021 36 ARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINP 115 (368)
T ss_pred cEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCC
Confidence 456777777665556679999999998665443 266665543 4789999988753 2221 11
Q ss_pred C--------CCcchhhhHHHHHHHHHhcCCCCcEE-EEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 64 N--------SIHSFDDYNKPLMDFMSSLTDNEKVI-LVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 64 ~--------~~~~~~~~~~~~~~~~~~~~~~~~i~-lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
. ...++.|+++.-+.+++.+. .+++. +||-||||+.+++.+..+|+++++++.+++..
T Consensus 116 ~g~~yg~~FP~~ti~D~V~aq~~ll~~LG-I~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~ 182 (368)
T COG2021 116 GGKPYGSDFPVITIRDMVRAQRLLLDALG-IKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAA 182 (368)
T ss_pred CCCccccCCCcccHHHHHHHHHHHHHhcC-cceEeeeeccChHHHHHHHHHHhChHHHhhhheecccc
Confidence 1 22466788877788888887 66665 99999999999999999999999999999865
No 85
>COG0400 Predicted esterase [General function prediction only]
Probab=99.33 E-value=1.3e-11 Score=82.13 Aligned_cols=117 Identities=16% Similarity=0.217 Sum_probs=76.0
Q ss_pred EeeCCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCC--CCC---CCCCCCCcchhhh-------HHHH
Q 032072 9 EIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGS--GTD---PSDANSIHSFDDY-------NKPL 76 (148)
Q Consensus 9 ~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~--g~s---~~~~~~~~~~~~~-------~~~~ 76 (148)
.+..+..+..|+||++||+|++...+.++.+.+. ..+.++.+.-+-- |.. .......++.++. .+.+
T Consensus 9 ~i~~~~~p~~~~iilLHG~Ggde~~~~~~~~~~~-P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l 87 (207)
T COG0400 9 RIEKPGDPAAPLLILLHGLGGDELDLVPLPELIL-PNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFL 87 (207)
T ss_pred cccCCCCCCCcEEEEEecCCCChhhhhhhhhhcC-CCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHH
Confidence 3444555567899999999999998888776665 4566655542211 000 0000011222222 2223
Q ss_pred HHHHHhcC-CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccccCCC
Q 032072 77 MDFMSSLT-DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLG 126 (148)
Q Consensus 77 ~~~~~~~~-~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~~~~ 126 (148)
.+..++.. +.++++++|+|.|+++++.+..++|+.+++++++++..+...
T Consensus 88 ~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~ 138 (207)
T COG0400 88 EELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP 138 (207)
T ss_pred HHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC
Confidence 33333332 357999999999999999999999999999999999776543
No 86
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.32 E-value=2.5e-11 Score=82.78 Aligned_cols=110 Identities=20% Similarity=0.197 Sum_probs=77.8
Q ss_pred CCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHh-c-----CC
Q 032072 12 KPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSS-L-----TD 85 (148)
Q Consensus 12 ~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~-~-----~~ 85 (148)
+...+.-|+|||+||+......|..+.++++..||.|+.+|+....... .........+..+++.+-++. + .+
T Consensus 11 P~~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~-~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D 89 (259)
T PF12740_consen 11 PSSAGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPD-DTDEVASAAEVIDWLAKGLESKLPLGVKPD 89 (259)
T ss_pred cCCCCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCC-cchhHHHHHHHHHHHHhcchhhcccccccc
Confidence 3345567999999999987777889999999999999999966543211 111112222333332221211 1 14
Q ss_pred CCcEEEEEeChhHHHHHHHHHhh-----chhhceeeEecccc
Q 032072 86 NEKVILVGHSAGGLSITQASHKF-----GNKIRLAVYLAATM 122 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~-----~~~i~~~i~~~~~~ 122 (148)
..++.+.|||-||-+++.++..+ ..+++++++++|..
T Consensus 90 ~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 90 FSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred ccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 56999999999999999999887 45899999999876
No 87
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.32 E-value=2e-11 Score=86.10 Aligned_cols=117 Identities=17% Similarity=0.259 Sum_probs=99.6
Q ss_pred CceeeEEEeeCCCCC---CCCeEEEEccCCCCccchHHHHHHHHhC---------CcEEEEEecCCCCCCCCCCCCCcch
Q 032072 2 GEEINMREIKKPAEV---QKPHFVLVHGISGGAWCWYKVRCLMENS---------GYKVSCINLKGSGTDPSDANSIHSF 69 (148)
Q Consensus 2 g~~~~~~~~~~~~~~---~~~~vl~~hG~~~~~~~~~~~~~~l~~~---------~~~v~~~d~~g~g~s~~~~~~~~~~ 69 (148)
|.++|+....++..+ .-.+++++||+.|+-.++..++..|.+. -|.|+++.+||+|+|+.......+.
T Consensus 133 GL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~ 212 (469)
T KOG2565|consen 133 GLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNA 212 (469)
T ss_pred ceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccH
Confidence 678888888776432 2258999999999999999988888753 3679999999999998877667888
Q ss_pred hhhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEec
Q 032072 70 DDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLA 119 (148)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~ 119 (148)
.+.+..++.++-++. ..+..+-|-.+|+.++..++..+|++|.++-+=.
T Consensus 213 ~a~ArvmrkLMlRLg-~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm 261 (469)
T KOG2565|consen 213 AATARVMRKLMLRLG-YNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNM 261 (469)
T ss_pred HHHHHHHHHHHHHhC-cceeEeecCchHHHHHHHHHhhcchhhhHhhhcc
Confidence 888888999999987 8999999999999999999999999998876643
No 88
>PRK10162 acetyl esterase; Provisional
Probab=99.32 E-value=8e-11 Score=83.65 Aligned_cols=113 Identities=13% Similarity=0.124 Sum_probs=75.7
Q ss_pred eeEEEeeCCCCCCCCeEEEEccCC---CCccchHHHHHHHHh-CCcEEEEEecCCCCCCCCCCCCCcchhhh---HHHHH
Q 032072 5 INMREIKKPAEVQKPHFVLVHGIS---GGAWCWYKVRCLMEN-SGYKVSCINLKGSGTDPSDANSIHSFDDY---NKPLM 77 (148)
Q Consensus 5 ~~~~~~~~~~~~~~~~vl~~hG~~---~~~~~~~~~~~~l~~-~~~~v~~~d~~g~g~s~~~~~~~~~~~~~---~~~~~ 77 (148)
+..+.+.+. ....|+||++||.+ ++...+..+.+.|.+ .|+.|+.+|+|...... .....++. .+.+.
T Consensus 69 i~~~~y~P~-~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~----~p~~~~D~~~a~~~l~ 143 (318)
T PRK10162 69 VETRLYYPQ-PDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEAR----FPQAIEEIVAVCCYFH 143 (318)
T ss_pred eEEEEECCC-CCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCC----CCCcHHHHHHHHHHHH
Confidence 444444432 33468999999977 556667777777765 59999999999643221 11233333 33344
Q ss_pred HHHHhcC-CCCcEEEEEeChhHHHHHHHHHhhc------hhhceeeEecccc
Q 032072 78 DFMSSLT-DNEKVILVGHSAGGLSITQASHKFG------NKIRLAVYLAATM 122 (148)
Q Consensus 78 ~~~~~~~-~~~~i~lvG~S~Gg~~a~~~~~~~~------~~i~~~i~~~~~~ 122 (148)
+..+.+. +.++++++|+|+||.+++.++.... .++.+++++.+..
T Consensus 144 ~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 195 (318)
T PRK10162 144 QHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLY 195 (318)
T ss_pred HhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCcc
Confidence 4444443 3579999999999999999987542 4688888887754
No 89
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.31 E-value=2.1e-11 Score=79.17 Aligned_cols=90 Identities=21% Similarity=0.250 Sum_probs=64.2
Q ss_pred EEEEccCCCC-ccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHH
Q 032072 21 FVLVHGISGG-AWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGL 99 (148)
Q Consensus 21 vl~~hG~~~~-~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~ 99 (148)
|+++||++++ ...|..+.+.-.+..++|..+++ ...+.++|.+.+.+.+.... +++++||||+|+.
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~-----------~~P~~~~W~~~l~~~i~~~~--~~~ilVaHSLGc~ 67 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW-----------DNPDLDEWVQALDQAIDAID--EPTILVAHSLGCL 67 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC-------------TS--HHHHHHHHHHCCHC-T--TTEEEEEETHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc-----------CCCCHHHHHHHHHHHHhhcC--CCeEEEEeCHHHH
Confidence 6899999975 56788765544334466666554 12577899999998888765 5799999999999
Q ss_pred HHHHHH-HhhchhhceeeEeccccc
Q 032072 100 SITQAS-HKFGNKIRLAVYLAATML 123 (148)
Q Consensus 100 ~a~~~~-~~~~~~i~~~i~~~~~~~ 123 (148)
.++.++ .....+|+++++++++.+
T Consensus 68 ~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 68 TALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHHTCCSSEEEEEEES--SC
T ss_pred HHHHHHhhcccccccEEEEEcCCCc
Confidence 999999 677889999999999875
No 90
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.28 E-value=1.7e-11 Score=80.79 Aligned_cols=117 Identities=15% Similarity=0.289 Sum_probs=89.9
Q ss_pred eeeEEEeeCCCCCCCCeEEEEccCCCCccchHHHHHHH-HhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHh
Q 032072 4 EINMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLM-ENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSS 82 (148)
Q Consensus 4 ~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l-~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~ 82 (148)
+++.+...+ +.+.|+++++|+..|+-......++.+ ...+.+|+.+++||+|.|+..+.. ....-.++.+.+.+..
T Consensus 66 tL~a~~~~~--E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE-~GL~lDs~avldyl~t 142 (300)
T KOG4391|consen 66 TLDAYLMLS--ESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSE-EGLKLDSEAVLDYLMT 142 (300)
T ss_pred eEeeeeecc--cCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccc-cceeccHHHHHHHHhc
Confidence 344444442 337899999999998877666655544 346889999999999999877643 5555556666666666
Q ss_pred cC--CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 83 LT--DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 83 ~~--~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
.. +..++++.|.|+||.++..++.++.+++.++++-+++..
T Consensus 143 ~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~S 185 (300)
T KOG4391|consen 143 RPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLS 185 (300)
T ss_pred CccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhcc
Confidence 54 357899999999999999999999999999999888654
No 91
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.27 E-value=1.1e-10 Score=75.53 Aligned_cols=107 Identities=12% Similarity=0.147 Sum_probs=78.6
Q ss_pred CCCCCeEEEEccCC-----CCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCc-
Q 032072 15 EVQKPHFVLVHGIS-----GGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEK- 88 (148)
Q Consensus 15 ~~~~~~vl~~hG~~-----~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 88 (148)
.+..|+.|++|.-. .+..-...++..|.+.|+.++-+|+||.|.|....+......+.++.+.++++...+..+
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~ 104 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSAS 104 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchh
Confidence 35678899998543 233445567888999999999999999999987766555555666666777777654444
Q ss_pred EEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 89 VILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 89 i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+.+.|+|+|+.+++.++.+.|+ +...+.+.++.
T Consensus 105 ~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~ 137 (210)
T COG2945 105 CWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPI 137 (210)
T ss_pred hhhcccchHHHHHHHHHHhccc-ccceeeccCCC
Confidence 4789999999999999998876 33344444443
No 92
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.27 E-value=1.5e-10 Score=76.23 Aligned_cols=110 Identities=17% Similarity=0.260 Sum_probs=86.5
Q ss_pred CCCCeEEEEccCCCCccc--hHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcE--EE
Q 032072 16 VQKPHFVLVHGISGGAWC--WYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKV--IL 91 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~--~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~l 91 (148)
++..+++++||+-++... ...++..+.+.|+.++-+|++|.|.|+.... .-+....++++...++.+.+..++ ++
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~-~Gn~~~eadDL~sV~q~~s~~nr~v~vi 109 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFY-YGNYNTEADDLHSVIQYFSNSNRVVPVI 109 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccc-cCcccchHHHHHHHHHHhccCceEEEEE
Confidence 456799999999987654 4568889999999999999999999876542 234455568888888888754443 58
Q ss_pred EEeChhHHHHHHHHHhhchhhceeeEecccccCCCC
Q 032072 92 VGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLGF 127 (148)
Q Consensus 92 vG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~~~~~ 127 (148)
+|||-||.+++.++.++.+ +..+|.+++.....+.
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~ 144 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNG 144 (269)
T ss_pred EeecCccHHHHHHHHhhcC-chheEEcccccchhcc
Confidence 8999999999999999987 7788888876644443
No 93
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.24 E-value=1e-10 Score=78.77 Aligned_cols=105 Identities=22% Similarity=0.227 Sum_probs=70.0
Q ss_pred CCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCC-CCCCCCCC-c--------chhhhHHHHHHHHHhc-
Q 032072 15 EVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGT-DPSDANSI-H--------SFDDYNKPLMDFMSSL- 83 (148)
Q Consensus 15 ~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~-s~~~~~~~-~--------~~~~~~~~~~~~~~~~- 83 (148)
.++.|.||++|+..|-......+++.|.+.||.|+++|+.+-.. ........ . ..+...+++.+.++.+
T Consensus 11 ~~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~ 90 (218)
T PF01738_consen 11 GGPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLR 90 (218)
T ss_dssp SSSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 35678999999999877777789999999999999999865433 11111000 0 0123344454444444
Q ss_pred --C--CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecc
Q 032072 84 --T--DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAA 120 (148)
Q Consensus 84 --~--~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~ 120 (148)
. +.++|.++|+|+||.+++.++.+. ..+++++..-+
T Consensus 91 ~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 91 AQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp CTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred hccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 2 246999999999999999999877 57888888776
No 94
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.22 E-value=4.2e-10 Score=75.66 Aligned_cols=106 Identities=13% Similarity=0.126 Sum_probs=68.7
Q ss_pred CCCeEEEEccCCCCccchHH---HHHHHHhCCcEEEEEecCCCC-------CCCC-CCCCCcchhhhHHHHHHHHHhcC-
Q 032072 17 QKPHFVLVHGISGGAWCWYK---VRCLMENSGYKVSCINLKGSG-------TDPS-DANSIHSFDDYNKPLMDFMSSLT- 84 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~---~~~~l~~~~~~v~~~d~~g~g-------~s~~-~~~~~~~~~~~~~~~~~~~~~~~- 84 (148)
+.|.||++||.+++...+.. +.+...+.||.|+.++..... +... ......+.....+.+.++..+..
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~i 94 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNI 94 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhccc
Confidence 45899999999998877653 333344578888888754211 0010 00011122222222333333332
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 85 DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 85 ~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+..+|++.|+|.||.++..++..+|+.|.++...++..
T Consensus 95 D~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred CCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 46899999999999999999999999999988887765
No 95
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.22 E-value=1.6e-10 Score=77.54 Aligned_cols=106 Identities=11% Similarity=0.140 Sum_probs=84.1
Q ss_pred CCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeC
Q 032072 16 VQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHS 95 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S 95 (148)
..+..++++|=.|+++..|+.|...|. ..+.++.+++||.+..-..+ ...++++++..+...+.......++.+.|||
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~W~~~lp-~~iel~avqlPGR~~r~~ep-~~~di~~Lad~la~el~~~~~d~P~alfGHS 82 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRSWSRRLP-ADIELLAVQLPGRGDRFGEP-LLTDIESLADELANELLPPLLDAPFALFGHS 82 (244)
T ss_pred CCCceEEEecCCCCCHHHHHHHHhhCC-chhheeeecCCCcccccCCc-ccccHHHHHHHHHHHhccccCCCCeeecccc
Confidence 356789999999999999999999887 47899999999998654433 3478899999988888742225789999999
Q ss_pred hhHHHHHHHHHhhch---hhceeeEeccccc
Q 032072 96 AGGLSITQASHKFGN---KIRLAVYLAATML 123 (148)
Q Consensus 96 ~Gg~~a~~~~~~~~~---~i~~~i~~~~~~~ 123 (148)
|||.+|.+++.+..+ .+..+++.+...|
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~aP 113 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCRAP 113 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCCCC
Confidence 999999999997753 3555666655554
No 96
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.20 E-value=2.2e-10 Score=94.22 Aligned_cols=102 Identities=16% Similarity=0.227 Sum_probs=85.7
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeCh
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSA 96 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~ 96 (148)
.+++++++||.+++...|..+.+.|. .++.|+.++.+|++.... ...+++++++++.+.++.+....++.++|||+
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l~-~~~~v~~~~~~g~~~~~~---~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~ 1142 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYLD-PQWSIYGIQSPRPDGPMQ---TATSLDEVCEAHLATLLEQQPHGPYHLLGYSL 1142 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhcC-CCCcEEEEECCCCCCCCC---CCCCHHHHHHHHHHHHHhhCCCCCEEEEEech
Confidence 45789999999999999999999887 679999999999975432 23788999999988888876456899999999
Q ss_pred hHHHHHHHHHhh---chhhceeeEecccc
Q 032072 97 GGLSITQASHKF---GNKIRLAVYLAATM 122 (148)
Q Consensus 97 Gg~~a~~~~~~~---~~~i~~~i~~~~~~ 122 (148)
||.++..++.+. ++++..++++++..
T Consensus 1143 Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1143 GGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred hhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 999999999864 56788888887643
No 97
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.19 E-value=2.9e-10 Score=85.02 Aligned_cols=114 Identities=14% Similarity=0.202 Sum_probs=84.3
Q ss_pred eeEEEeeCCC-CCCCCeEEEEccCCCCccch-----HHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHH
Q 032072 5 INMREIKKPA-EVQKPHFVLVHGISGGAWCW-----YKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMD 78 (148)
Q Consensus 5 ~~~~~~~~~~-~~~~~~vl~~hG~~~~~~~~-----~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~ 78 (148)
+.++.+.+.+ ...+.+||+++.+......+ +.+.+.|.+.|+.|+.+|++.-+..... .+++++++.+.+
T Consensus 201 ~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~----~~ldDYv~~i~~ 276 (560)
T TIGR01839 201 LELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHRE----WGLSTYVDALKE 276 (560)
T ss_pred eEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcC----CCHHHHHHHHHH
Confidence 3444454433 24568999999887655444 4688999999999999999986554322 566777766665
Q ss_pred HHHhc---CCCCcEEEEEeChhHHHHHH----HHHhhch-hhceeeEecccc
Q 032072 79 FMSSL---TDNEKVILVGHSAGGLSITQ----ASHKFGN-KIRLAVYLAATM 122 (148)
Q Consensus 79 ~~~~~---~~~~~i~lvG~S~Gg~~a~~----~~~~~~~-~i~~~i~~~~~~ 122 (148)
.++.. .+.+++.++|||+||.++.. ++.++++ +|+.++++.++.
T Consensus 277 Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatpl 328 (560)
T TIGR01839 277 AVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLL 328 (560)
T ss_pred HHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeeccc
Confidence 55554 34689999999999999886 7778775 799999998866
No 98
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.19 E-value=4.1e-10 Score=86.50 Aligned_cols=119 Identities=24% Similarity=0.260 Sum_probs=83.5
Q ss_pred CceeeEEEeeCCCCC---CCCeEEEEccCCCCccc--hHHHHHHHHhCCcEEEEEecCCCCCCC-------CCCCCCcch
Q 032072 2 GEEINMREIKKPAEV---QKPHFVLVHGISGGAWC--WYKVRCLMENSGYKVSCINLKGSGTDP-------SDANSIHSF 69 (148)
Q Consensus 2 g~~~~~~~~~~~~~~---~~~~vl~~hG~~~~~~~--~~~~~~~l~~~~~~v~~~d~~g~g~s~-------~~~~~~~~~ 69 (148)
|.+++.+.+.++... +-|+|+++||....... +....+.+...||.|+.++.||.+.-. .........
T Consensus 375 G~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~ 454 (620)
T COG1506 375 GETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDL 454 (620)
T ss_pred CCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccH
Confidence 567777777654322 23899999999754433 556677888899999999999753211 111122455
Q ss_pred hhhHHHHHHHHHhcC--CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 70 DDYNKPLMDFMSSLT--DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 70 ~~~~~~~~~~~~~~~--~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+|+.+.+. ++.... +.+++.+.|+|+||++++..+.+.+ .+++.+...+..
T Consensus 455 ~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~ 507 (620)
T COG1506 455 EDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGV 507 (620)
T ss_pred HHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcc
Confidence 66666666 555554 3469999999999999999999988 677777776644
No 99
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.18 E-value=1.9e-09 Score=73.54 Aligned_cols=117 Identities=17% Similarity=0.177 Sum_probs=81.0
Q ss_pred eeEEEeeCCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCC-CCCCCCCC------C----CcchhhhH
Q 032072 5 INMREIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGS-GTDPSDAN------S----IHSFDDYN 73 (148)
Q Consensus 5 ~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~-g~s~~~~~------~----~~~~~~~~ 73 (148)
+.-+...+...+..|.||++|+..+-.......++.|...||.++++|+.+. +.+..... . .....+..
T Consensus 14 ~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (236)
T COG0412 14 LPAYLARPAGAGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVL 93 (236)
T ss_pred EeEEEecCCcCCCCCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHH
Confidence 3333443433444499999999999888999999999999999999998763 22221110 0 01123444
Q ss_pred HHHHHHHHhcC-----CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 74 KPLMDFMSSLT-----DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 74 ~~~~~~~~~~~-----~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+++...++.+. +.++|.++|+|+||.+++.++.+.| .+++.+..-+..
T Consensus 94 ~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~ 146 (236)
T COG0412 94 ADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGL 146 (236)
T ss_pred HHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCC
Confidence 55555555542 3578999999999999999999877 678777766544
No 100
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.14 E-value=8e-10 Score=76.93 Aligned_cols=120 Identities=14% Similarity=0.165 Sum_probs=77.4
Q ss_pred CceeeEEEeeC--CCCCCCCeEEEEccCCCCccchHH----HH------HHHHhCCcEEEEEecCCCCCCCCCCCCCcch
Q 032072 2 GEEINMREIKK--PAEVQKPHFVLVHGISGGAWCWYK----VR------CLMENSGYKVSCINLKGSGTDPSDANSIHSF 69 (148)
Q Consensus 2 g~~~~~~~~~~--~~~~~~~~vl~~hG~~~~~~~~~~----~~------~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~ 69 (148)
|.+|....+.+ ...+..|+|+..++++........ .. ..+.+.||.++..|.||.|.|+...... .
T Consensus 2 Gv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~--~ 79 (272)
T PF02129_consen 2 GVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM--S 79 (272)
T ss_dssp S-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--S
T ss_pred CCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--C
Confidence 66777666655 555667899999999964311111 11 1277799999999999999998765331 2
Q ss_pred hhhHHH---HHHHHHhcC-CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 70 DDYNKP---LMDFMSSLT-DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 70 ~~~~~~---~~~~~~~~~-~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
....++ +.+.+...+ ...+|.++|.|++|...+.+|...|..+++++...+...
T Consensus 80 ~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 80 PNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSD 137 (272)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SB
T ss_pred hhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCc
Confidence 223333 333443332 236899999999999999999988888999988877553
No 101
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.13 E-value=1.1e-10 Score=78.41 Aligned_cols=88 Identities=27% Similarity=0.365 Sum_probs=52.6
Q ss_pred CeEEEEccCCC-CccchHHHHHHHHhCCcE---EEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC---CCCcEEE
Q 032072 19 PHFVLVHGISG-GAWCWYKVRCLMENSGYK---VSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT---DNEKVIL 91 (148)
Q Consensus 19 ~~vl~~hG~~~-~~~~~~~~~~~l~~~~~~---v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~l 91 (148)
.||||+||.++ ....|..+++.|.+.||. ++.+++-......... ......+.++++.++++... .. +|-+
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~-~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDI 79 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQ-NAHMSCESAKQLRAFIDAVLAYTGA-KVDI 79 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHH-HHHB-HHHHHHHHHHHHHHHHHHT---EEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCccc-ccccchhhHHHHHHHHHHHHHhhCC-EEEE
Confidence 58999999998 678899999999999998 7888875432211100 00111233355555555542 35 9999
Q ss_pred EEeChhHHHHHHHHHhh
Q 032072 92 VGHSAGGLSITQASHKF 108 (148)
Q Consensus 92 vG~S~Gg~~a~~~~~~~ 108 (148)
||||||+.++..+++..
T Consensus 80 VgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 80 VGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEETCHHHHHHHHHHHC
T ss_pred EEcCCcCHHHHHHHHHc
Confidence 99999999999998743
No 102
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.13 E-value=2.4e-10 Score=77.72 Aligned_cols=119 Identities=22% Similarity=0.299 Sum_probs=83.1
Q ss_pred CceeeEEEeeCCCC-CCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCC----C-----------
Q 032072 2 GEEINMREIKKPAE-VQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDAN----S----------- 65 (148)
Q Consensus 2 g~~~~~~~~~~~~~-~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~----~----------- 65 (148)
|.+|.-+.+-+... +..|.|+-.||++++...|..+..... .||.++..|.||.|.++.+.. .
T Consensus 66 g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~-~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGi 144 (321)
T COG3458 66 GARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAV-AGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGI 144 (321)
T ss_pred CceEEEEEEeecccCCccceEEEEeeccCCCCCccccccccc-cceeEEEEecccCCCccccCCCCCCCCcCCceeEeec
Confidence 45666665544443 567999999999999988877776666 899999999999987743111 0
Q ss_pred -----CcchhhhHHH---HHHHHHhcC--CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 66 -----IHSFDDYNKP---LMDFMSSLT--DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 66 -----~~~~~~~~~~---~~~~~~~~~--~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
.+-......+ ..+.+.++. +.++|.+.|.|+||.+++.++...| ++++++..-|+.
T Consensus 145 lD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl 210 (321)
T COG3458 145 LDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFL 210 (321)
T ss_pred ccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccccccc
Confidence 0001111122 233444443 3689999999999999999988765 688888887765
No 103
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.12 E-value=4.9e-10 Score=76.91 Aligned_cols=108 Identities=26% Similarity=0.362 Sum_probs=68.5
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHH-hCCcE--EE--EEecCCC----CCCC---CCC-------CCC-cchhhhHHHH
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLME-NSGYK--VS--CINLKGS----GTDP---SDA-------NSI-HSFDDYNKPL 76 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~-~~~~~--v~--~~d~~g~----g~s~---~~~-------~~~-~~~~~~~~~~ 76 (148)
+..|.||+||++++...+..+++.+. +.+.. ++ .++.-|. |.-. ..+ ... .+....++.+
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 45799999999999999999999997 55543 33 3333332 2111 111 011 2455666666
Q ss_pred HHHHHhc---CCCCcEEEEEeChhHHHHHHHHHhhch-----hhceeeEecccccC
Q 032072 77 MDFMSSL---TDNEKVILVGHSAGGLSITQASHKFGN-----KIRLAVYLAATMLK 124 (148)
Q Consensus 77 ~~~~~~~---~~~~~i~lvG~S~Gg~~a~~~~~~~~~-----~i~~~i~~~~~~~~ 124 (148)
...+..| ...+++.+|||||||..++.|+..+.. ++.++|.|++++..
T Consensus 90 ~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng 145 (255)
T PF06028_consen 90 KKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNG 145 (255)
T ss_dssp HHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTT
T ss_pred HHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCc
Confidence 6666555 346899999999999999999887532 58999999998853
No 104
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.12 E-value=2.7e-09 Score=67.42 Aligned_cols=117 Identities=17% Similarity=0.194 Sum_probs=84.3
Q ss_pred CCCCCCCCeEEEEccCCCC--ccchHHHHHHHHhCCcEEEEEecCCCCCC-----CCCCCCCcchhhhHHHHHHHHHhcC
Q 032072 12 KPAEVQKPHFVLVHGISGG--AWCWYKVRCLMENSGYKVSCINLKGSGTD-----PSDANSIHSFDDYNKPLMDFMSSLT 84 (148)
Q Consensus 12 ~~~~~~~~~vl~~hG~~~~--~~~~~~~~~~l~~~~~~v~~~d~~g~g~s-----~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (148)
.+.....-+||+.||.+++ +..+...+..+...|+.|.-++++.+... .+++....-..++...+.++...+.
T Consensus 8 ~pag~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~ 87 (213)
T COG3571 8 DPAGPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLA 87 (213)
T ss_pred CCCCCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhccc
Confidence 4433345578888999874 45567788888889999999998865322 1222222233455666666666665
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccccCCCCcc
Q 032072 85 DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLGFCT 129 (148)
Q Consensus 85 ~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~~~~~~~ 129 (148)
..++++-|+||||.++-.++-.....|.++++++=++.+++...
T Consensus 88 -~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe 131 (213)
T COG3571 88 -EGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPE 131 (213)
T ss_pred -CCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCcc
Confidence 67999999999999999998877777999999998887766644
No 105
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.11 E-value=1.4e-09 Score=77.19 Aligned_cols=117 Identities=21% Similarity=0.256 Sum_probs=69.9
Q ss_pred eeeEEEeeCC-CCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCC-------------CCcc-
Q 032072 4 EINMREIKKP-AEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDAN-------------SIHS- 68 (148)
Q Consensus 4 ~~~~~~~~~~-~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~-------------~~~~- 68 (148)
.+.-+.+.+. ..++.|.||.+||+++....+....... ..|+.++.+|.+|.|..+.... ...+
T Consensus 68 ~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a-~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~ 146 (320)
T PF05448_consen 68 RVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWA-AAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDN 146 (320)
T ss_dssp EEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHH-HTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-
T ss_pred EEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccc-cCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCc
Confidence 4444444343 3456689999999999877776655544 4899999999999983221110 0011
Q ss_pred h-----hhhHHHH---HHHHHhcC--CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 69 F-----DDYNKPL---MDFMSSLT--DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 69 ~-----~~~~~~~---~~~~~~~~--~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
. .....+. .+++.+++ +.++|.+.|.|+||.+++.++...+ +|++++...|..
T Consensus 147 ~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l 209 (320)
T PF05448_consen 147 PEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFL 209 (320)
T ss_dssp TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESS
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCc
Confidence 1 1122222 34444554 3579999999999999999998775 699988887755
No 106
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=99.11 E-value=6.3e-11 Score=84.31 Aligned_cols=110 Identities=20% Similarity=0.314 Sum_probs=66.8
Q ss_pred CCCCCeEEEEccCCCCc--cchH-HHHHHHHh---CCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC----
Q 032072 15 EVQKPHFVLVHGISGGA--WCWY-KVRCLMEN---SGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT---- 84 (148)
Q Consensus 15 ~~~~~~vl~~hG~~~~~--~~~~-~~~~~l~~---~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~---- 84 (148)
..++|++|++||+.++. ..|. .+.+.+.+ ..++|+++|+...... .......+.....+.+..+++.+.
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~-~Y~~a~~n~~~vg~~la~~l~~L~~~~g 146 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN-NYPQAVANTRLVGRQLAKFLSFLINNFG 146 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc-cccchhhhHHHHHHHHHHHHHHHHhhcC
Confidence 34679999999999876 3454 34554433 4789999998743221 100011123334444444444442
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhhch--hhceeeEecccccCC
Q 032072 85 -DNEKVILVGHSAGGLSITQASHKFGN--KIRLAVYLAATMLKL 125 (148)
Q Consensus 85 -~~~~i~lvG~S~Gg~~a~~~~~~~~~--~i~~~i~~~~~~~~~ 125 (148)
+.+++.+||||+||++|-.+...... ++.+|..++|..|..
T Consensus 147 ~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 147 VPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLF 190 (331)
T ss_dssp --GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTT
T ss_pred CChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccc
Confidence 46899999999999999999998877 899999999987643
No 107
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.09 E-value=6.8e-10 Score=74.50 Aligned_cols=93 Identities=22% Similarity=0.263 Sum_probs=61.7
Q ss_pred hHHHHHHHHhCCcEEEEEecCCCCCCCC-------CCCCCcchhhhHHHHHHHHHhc-CCCCcEEEEEeChhHHHHHHHH
Q 032072 34 WYKVRCLMENSGYKVSCINLKGSGTDPS-------DANSIHSFDDYNKPLMDFMSSL-TDNEKVILVGHSAGGLSITQAS 105 (148)
Q Consensus 34 ~~~~~~~l~~~~~~v~~~d~~g~g~s~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~lvG~S~Gg~~a~~~~ 105 (148)
|......|.+.||.|+.+|.||.+.... ........+|..+.+..+++.- -+.++|.++|+|+||+++..++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 3345667878999999999998763211 1111123344444444444442 1358999999999999999999
Q ss_pred HhhchhhceeeEecccccCCC
Q 032072 106 HKFGNKIRLAVYLAATMLKLG 126 (148)
Q Consensus 106 ~~~~~~i~~~i~~~~~~~~~~ 126 (148)
.++|+++++++..++......
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~ 103 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFS 103 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTC
T ss_pred cccceeeeeeeccceecchhc
Confidence 999999999999988764433
No 108
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.09 E-value=4.9e-09 Score=72.37 Aligned_cols=115 Identities=14% Similarity=0.178 Sum_probs=76.7
Q ss_pred eeEEEeeCCCCCCCCeEEEEccCCCCccc-hHHH-----HHHHHhCCcEEEEEecCCCCCCCCCCC---CCcchhhhHHH
Q 032072 5 INMREIKKPAEVQKPHFVLVHGISGGAWC-WYKV-----RCLMENSGYKVSCINLKGSGTDPSDAN---SIHSFDDYNKP 75 (148)
Q Consensus 5 ~~~~~~~~~~~~~~~~vl~~hG~~~~~~~-~~~~-----~~~l~~~~~~v~~~d~~g~g~s~~~~~---~~~~~~~~~~~ 75 (148)
+++...+.+.. ++|++|=.|-.|.+... |..+ .+.+. ..+.++-+|.||+.......+ ...++++.++.
T Consensus 11 v~V~v~G~~~~-~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~ 88 (283)
T PF03096_consen 11 VHVTVQGDPKG-NKPAILTYHDVGLNHKSCFQGFFNFEDMQEIL-QNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEM 88 (283)
T ss_dssp EEEEEESS--T-TS-EEEEE--TT--HHHHCHHHHCSHHHHHHH-TTSEEEEEE-TTTSTT-----TT-----HHHHHCT
T ss_pred EEEEEEecCCC-CCceEEEeccccccchHHHHHHhcchhHHHHh-hceEEEEEeCCCCCCCcccccccccccCHHHHHHH
Confidence 44444444432 68999999999976554 5544 33444 689999999999865543332 23688999999
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 76 LMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 76 ~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+.+.++.+. .+.++.+|...|+++..++|.++|+++.++|++++..
T Consensus 89 l~~Vl~~f~-lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~ 134 (283)
T PF03096_consen 89 LPEVLDHFG-LKSVIGFGVGAGANILARFALKHPERVLGLILVNPTC 134 (283)
T ss_dssp HHHHHHHHT----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---
T ss_pred HHHHHHhCC-ccEEEEEeeccchhhhhhccccCccceeEEEEEecCC
Confidence 999999998 7899999999999999999999999999999999876
No 109
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.08 E-value=6.9e-10 Score=80.43 Aligned_cols=122 Identities=20% Similarity=0.301 Sum_probs=86.9
Q ss_pred CceeeEEEeeCCCCCCCCeEEEEccCCCCccchHH------HHHHHHhCCcEEEEEecCCCCCCCCCCCC---------C
Q 032072 2 GEEINMREIKKPAEVQKPHFVLVHGISGGAWCWYK------VRCLMENSGYKVSCINLKGSGTDPSDANS---------I 66 (148)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~~~------~~~~l~~~~~~v~~~d~~g~g~s~~~~~~---------~ 66 (148)
|+-+.+.+++... +++|+|++.||+.+++..|.. ++=.|.+.||.|+.-+.||...|.+.... .
T Consensus 58 gYiL~lhRIp~~~-~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~ 136 (403)
T KOG2624|consen 58 GYILTLHRIPRGK-KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWD 136 (403)
T ss_pred CeEEEEeeecCCC-CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceee
Confidence 4445555665444 678999999999998888743 55568889999999999997665432210 1
Q ss_pred cchhhhH-----HHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhch---hhceeeEecccccCC
Q 032072 67 HSFDDYN-----KPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGN---KIRLAVYLAATMLKL 125 (148)
Q Consensus 67 ~~~~~~~-----~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~---~i~~~i~~~~~~~~~ 125 (148)
++++++. +.+..+++... .+++..+|||+|+.....++...|+ +|+..++++|.....
T Consensus 137 FS~~Em~~yDLPA~IdyIL~~T~-~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k 202 (403)
T KOG2624|consen 137 FSWHEMGTYDLPAMIDYILEKTG-QEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPK 202 (403)
T ss_pred cchhhhhhcCHHHHHHHHHHhcc-ccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhc
Confidence 2344432 23333333333 6899999999999999988887654 799999999987443
No 110
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.08 E-value=2.4e-09 Score=70.43 Aligned_cols=86 Identities=20% Similarity=0.427 Sum_probs=64.1
Q ss_pred EEEEccCCCCccchHH--HHHHHHhCC--cEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeCh
Q 032072 21 FVLVHGISGGAWCWYK--VRCLMENSG--YKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSA 96 (148)
Q Consensus 21 vl~~hG~~~~~~~~~~--~~~~l~~~~--~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~ 96 (148)
|+++||+.+++..... +.+.+.+.+ ..+.+++++ ....+..+.+.+.+++.. .+.+.++|.||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~~-~~~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEELK-PENVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhCC-CCCeEEEEECh
Confidence 7899999998876653 455565544 344555543 456777788888888886 45599999999
Q ss_pred hHHHHHHHHHhhchhhceeeEecccc
Q 032072 97 GGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 97 Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
||+.|..++.+++ ++. |+++|..
T Consensus 69 GG~~A~~La~~~~--~~a-vLiNPav 91 (187)
T PF05728_consen 69 GGFYATYLAERYG--LPA-VLINPAV 91 (187)
T ss_pred HHHHHHHHHHHhC--CCE-EEEcCCC
Confidence 9999999998886 344 8888876
No 111
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.07 E-value=1.1e-09 Score=74.21 Aligned_cols=110 Identities=16% Similarity=0.182 Sum_probs=76.3
Q ss_pred CCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC------C
Q 032072 12 KPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT------D 85 (148)
Q Consensus 12 ~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~------~ 85 (148)
+...+.-|+|+|+||+......|..+..+++..||-++++++-..-. ...........+..+++..-++.+. +
T Consensus 40 P~~~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~-p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~n 118 (307)
T PF07224_consen 40 PSEAGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFP-PDGQDEIKSAASVINWLPEGLQHVLPENVEAN 118 (307)
T ss_pred CCcCCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccC-CCchHHHHHHHHHHHHHHhhhhhhCCCCcccc
Confidence 33455679999999999998889999999999999999999875321 1111111222233333333333331 3
Q ss_pred CCcEEEEEeChhHHHHHHHHHhhc--hhhceeeEecccc
Q 032072 86 NEKVILVGHSAGGLSITQASHKFG--NKIRLAVYLAATM 122 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~~--~~i~~~i~~~~~~ 122 (148)
..++.++|||.||-.+..+|..+. -++.++|.++|..
T Consensus 119 l~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 119 LSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred cceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 579999999999999999988663 2588888888765
No 112
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=99.06 E-value=2.9e-09 Score=72.46 Aligned_cols=107 Identities=17% Similarity=0.199 Sum_probs=71.1
Q ss_pred CCCCeEEEEccCCCCccch-HHHHHHHHhCCc--EEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC---CCCcE
Q 032072 16 VQKPHFVLVHGISGGAWCW-YKVRCLMENSGY--KVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT---DNEKV 89 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~~-~~~~~~l~~~~~--~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i 89 (148)
..+.++||+||+..+...- ...++.....++ .++.+.||+.|..........+...-...+.++++.+. +.++|
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 3678999999999876543 333333333333 68999999887643322222333344445566666553 36899
Q ss_pred EEEEeChhHHHHHHHHHhhc---------hhhceeeEecccc
Q 032072 90 ILVGHSAGGLSITQASHKFG---------NKIRLAVYLAATM 122 (148)
Q Consensus 90 ~lvG~S~Gg~~a~~~~~~~~---------~~i~~~i~~~~~~ 122 (148)
.+++||||+.+.+.++.... .++..+++++|-.
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 99999999999998876431 2577888888755
No 113
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.06 E-value=2.1e-09 Score=71.85 Aligned_cols=98 Identities=17% Similarity=0.250 Sum_probs=64.0
Q ss_pred EEEEccCCC---CccchHHHHHHHH-hCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhc----CCCCcEEEE
Q 032072 21 FVLVHGISG---GAWCWYKVRCLME-NSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSL----TDNEKVILV 92 (148)
Q Consensus 21 vl~~hG~~~---~~~~~~~~~~~l~-~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~lv 92 (148)
||++||.+- +......+...+. +.|+.|+.+|+|-... ......++|..+.+..+.+.. .+.++|+++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~----~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~ 76 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPE----APFPAALEDVKAAYRWLLKNADKLGIDPERIVLI 76 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTT----SSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccc----ccccccccccccceeeeccccccccccccceEEe
Confidence 789999873 4444445555555 4899999999995321 122244455555555555551 236799999
Q ss_pred EeChhHHHHHHHHHhhch----hhceeeEecccc
Q 032072 93 GHSAGGLSITQASHKFGN----KIRLAVYLAATM 122 (148)
Q Consensus 93 G~S~Gg~~a~~~~~~~~~----~i~~~i~~~~~~ 122 (148)
|+|.||.+++.++.+..+ .++++++++|..
T Consensus 77 G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 77 GDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp EETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred ecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 999999999999986655 389999998854
No 114
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.05 E-value=2.2e-09 Score=76.71 Aligned_cols=105 Identities=20% Similarity=0.261 Sum_probs=60.2
Q ss_pred CCCCCeEEEEccCCCCccc--------------h----HHHHHHHHhCCcEEEEEecCCCCCCCCCCCCC----cchhhh
Q 032072 15 EVQKPHFVLVHGISGGAWC--------------W----YKVRCLMENSGYKVSCINLKGSGTDPSDANSI----HSFDDY 72 (148)
Q Consensus 15 ~~~~~~vl~~hG~~~~~~~--------------~----~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~----~~~~~~ 72 (148)
++..|+||++||-++..+. + ..++..|.+.||.|+++|.+++|+........ .+.+.+
T Consensus 112 ~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~l 191 (390)
T PF12715_consen 112 KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQAL 191 (390)
T ss_dssp -S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHH
T ss_pred CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHH
Confidence 4566899999987754322 1 12467788899999999999999765432111 111111
Q ss_pred HH------------------HHHHHHHhcC--CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecc
Q 032072 73 NK------------------PLMDFMSSLT--DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAA 120 (148)
Q Consensus 73 ~~------------------~~~~~~~~~~--~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~ 120 (148)
+. ...+++.+++ +.++|.++|+||||..++.++... ++|+..+..+.
T Consensus 192 a~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~ 258 (390)
T PF12715_consen 192 ARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGY 258 (390)
T ss_dssp HHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhh
Confidence 11 2345555554 357999999999999999998875 47877665544
No 115
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=99.04 E-value=1e-09 Score=73.94 Aligned_cols=89 Identities=19% Similarity=0.274 Sum_probs=52.5
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHHhC--CcEEEEEecCCCCCCCCCCCCCcchhhhHHH----HHHHHHhcCCC-CcE
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLMENS--GYKVSCINLKGSGTDPSDANSIHSFDDYNKP----LMDFMSSLTDN-EKV 89 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~--~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~i 89 (148)
+...||++||+.|+...|..+.+.+... .+.-..+...++..... ....+++...+. +.+.++..... .++
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~--~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~I 80 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEF--KTFDGIDVCGERLAEEILEHIKDYESKIRKI 80 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhccccccc--ccchhhHHHHHHHHHHHHHhccccccccccc
Confidence 4568999999999999998877776641 22111111111111111 112344444444 44444444422 589
Q ss_pred EEEEeChhHHHHHHHHHh
Q 032072 90 ILVGHSAGGLSITQASHK 107 (148)
Q Consensus 90 ~lvG~S~Gg~~a~~~~~~ 107 (148)
++|||||||.++..++..
T Consensus 81 sfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALGL 98 (217)
T ss_pred eEEEecccHHHHHHHHHH
Confidence 999999999999877663
No 116
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.03 E-value=1.4e-08 Score=69.97 Aligned_cols=115 Identities=14% Similarity=0.193 Sum_probs=90.6
Q ss_pred eeEEEeeCCCCCCCCeEEEEccCCCCccc-hHHH-----HHHHHhCCcEEEEEecCCCCCCCCCCC---CCcchhhhHHH
Q 032072 5 INMREIKKPAEVQKPHFVLVHGISGGAWC-WYKV-----RCLMENSGYKVSCINLKGSGTDPSDAN---SIHSFDDYNKP 75 (148)
Q Consensus 5 ~~~~~~~~~~~~~~~~vl~~hG~~~~~~~-~~~~-----~~~l~~~~~~v~~~d~~g~g~s~~~~~---~~~~~~~~~~~ 75 (148)
++....+.+.. ++|++|=.|.++.+... |..+ +..+.+ .+.++.+|.||+....+..+ ...++++.+++
T Consensus 34 v~V~V~Gd~~~-~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~-~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~ 111 (326)
T KOG2931|consen 34 VHVTVYGDPKG-NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE-HFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADM 111 (326)
T ss_pred EEEEEecCCCC-CCceEEEecccccchHhHhHHhhcCHhHHHHHh-heEEEecCCCccccCCccCCCCCCCCCHHHHHHH
Confidence 45555566544 67888889999986554 5543 334443 49999999999865543332 23688999999
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 76 LMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 76 ~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+...++.+. .+.++-+|.-.|+++..++|..||++|.++|+++...
T Consensus 112 l~~VL~~f~-lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~ 157 (326)
T KOG2931|consen 112 LPEVLDHFG-LKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDP 157 (326)
T ss_pred HHHHHHhcC-cceEEEecccccHHHHHHHHhcChhheeEEEEEecCC
Confidence 999999998 8899999999999999999999999999999999865
No 117
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.00 E-value=9.9e-09 Score=70.75 Aligned_cols=120 Identities=13% Similarity=0.149 Sum_probs=78.6
Q ss_pred ceeeEEEeeCCC-CCCCCeEEEEccCCCCccchHHHH--HHH-HhCCcEEEEEecCCCCC-------CCCC---CCCCcc
Q 032072 3 EEINMREIKKPA-EVQKPHFVLVHGISGGAWCWYKVR--CLM-ENSGYKVSCINLKGSGT-------DPSD---ANSIHS 68 (148)
Q Consensus 3 ~~~~~~~~~~~~-~~~~~~vl~~hG~~~~~~~~~~~~--~~l-~~~~~~v~~~d~~g~g~-------s~~~---~~~~~~ 68 (148)
....|+.+.++. +++.|.||++||..++...+.... +.+ .+.||-|+.+|-....+ +..+ +....+
T Consensus 45 ~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~dd 124 (312)
T COG3509 45 LKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDD 124 (312)
T ss_pred CccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCccH
Confidence 345566555554 345589999999998877655432 333 34789998885322111 1001 112233
Q ss_pred hhhhHHHHHHHHHhcC-CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 69 FDDYNKPLMDFMSSLT-DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 69 ~~~~~~~~~~~~~~~~-~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
...+++.+..++.+.. +..+|++.|.|.||.|+..++-.+|+.+.++.++++..
T Consensus 125 Vgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 125 VGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred HHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 3344444455554443 35799999999999999999999999999999988876
No 118
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.99 E-value=2.8e-09 Score=78.49 Aligned_cols=92 Identities=22% Similarity=0.253 Sum_probs=65.6
Q ss_pred CccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCC-CcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhh
Q 032072 30 GAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANS-IHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 30 ~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
....|..+++.|.+.||.. ..|++|++.+.+.... ....++..+.+.++.+... ..+++++||||||.++..++..+
T Consensus 106 ~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g-~~kV~LVGHSMGGlva~~fl~~~ 183 (440)
T PLN02733 106 EVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASG-GKKVNIISHSMGGLLVKCFMSLH 183 (440)
T ss_pred hHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcC-CCCEEEEEECHhHHHHHHHHHHC
Confidence 3456778899999888755 7899999877654311 1123333344444444444 67999999999999999999887
Q ss_pred ch----hhceeeEeccccc
Q 032072 109 GN----KIRLAVYLAATML 123 (148)
Q Consensus 109 ~~----~i~~~i~~~~~~~ 123 (148)
|+ .|+++|+++++..
T Consensus 184 p~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 184 SDVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred CHhHHhHhccEEEECCCCC
Confidence 75 4789999988764
No 119
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.96 E-value=1.4e-08 Score=64.98 Aligned_cols=93 Identities=16% Similarity=0.206 Sum_probs=68.4
Q ss_pred CeEEEEccCCCC-ccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChh
Q 032072 19 PHFVLVHGISGG-AWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAG 97 (148)
Q Consensus 19 ~~vl~~hG~~~~-~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~G 97 (148)
+.+|++||+.++ ...|..+.+.-. ..+-.+++.. ......++|.+.+.+.+.... +++++|+||+|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l---~~a~rveq~~--------w~~P~~~dWi~~l~~~v~a~~--~~~vlVAHSLG 69 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESAL---PNARRVEQDD--------WEAPVLDDWIARLEKEVNAAE--GPVVLVAHSLG 69 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhC---ccchhcccCC--------CCCCCHHHHHHHHHHHHhccC--CCeEEEEeccc
Confidence 578999999875 455665433221 1222222221 122678999999999998874 66999999999
Q ss_pred HHHHHHHHHhhchhhceeeEecccccC
Q 032072 98 GLSITQASHKFGNKIRLAVYLAATMLK 124 (148)
Q Consensus 98 g~~a~~~~~~~~~~i~~~i~~~~~~~~ 124 (148)
+..+..++.+...+|.|+++++++...
T Consensus 70 c~~v~h~~~~~~~~V~GalLVAppd~~ 96 (181)
T COG3545 70 CATVAHWAEHIQRQVAGALLVAPPDVS 96 (181)
T ss_pred HHHHHHHHHhhhhccceEEEecCCCcc
Confidence 999999999988899999999998743
No 120
>PRK10115 protease 2; Provisional
Probab=98.95 E-value=2.8e-08 Score=77.25 Aligned_cols=123 Identities=15% Similarity=0.162 Sum_probs=85.6
Q ss_pred CceeeEEEeeCC---CCCCCCeEEEEccCCCCc--cchHHHHHHHHhCCcEEEEEecCCCCCCCC-------CCCCCcch
Q 032072 2 GEEINMREIKKP---AEVQKPHFVLVHGISGGA--WCWYKVRCLMENSGYKVSCINLKGSGTDPS-------DANSIHSF 69 (148)
Q Consensus 2 g~~~~~~~~~~~---~~~~~~~vl~~hG~~~~~--~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~-------~~~~~~~~ 69 (148)
|.++.+..+..+ ..++.|.||++||..+.. ..|......+.+.|+.|+.++.||-|.-.. ......++
T Consensus 426 G~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~ 505 (686)
T PRK10115 426 GVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTF 505 (686)
T ss_pred CCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcH
Confidence 556665433322 234569999999977644 335555566777999999999998643221 11122455
Q ss_pred hhhHHHHHHHHHhc-CCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccccC
Q 032072 70 DDYNKPLMDFMSSL-TDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLK 124 (148)
Q Consensus 70 ~~~~~~~~~~~~~~-~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~~ 124 (148)
+|....+..++++= .+.+++.+.|.|.||+++..++.++|+.++++|...|....
T Consensus 506 ~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~ 561 (686)
T PRK10115 506 NDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDV 561 (686)
T ss_pred HHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhH
Confidence 66665555555442 24689999999999999999999999999999998887753
No 121
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.93 E-value=3.4e-09 Score=76.88 Aligned_cols=108 Identities=19% Similarity=0.327 Sum_probs=59.8
Q ss_pred CCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCC------C-----C------CC-------CC--cch
Q 032072 16 VQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDP------S-----D------AN-------SI--HSF 69 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~------~-----~------~~-------~~--~~~ 69 (148)
++-|+|||-||++++...|..+...|+..||.|+++|.|...... . . .. .. ...
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 456899999999999999999999999999999999999642110 0 0 00 00 000
Q ss_pred h-----hh---HHHH---HHHHHhcC----------------------CCCcEEEEEeChhHHHHHHHHHhhchhhceee
Q 032072 70 D-----DY---NKPL---MDFMSSLT----------------------DNEKVILVGHSAGGLSITQASHKFGNKIRLAV 116 (148)
Q Consensus 70 ~-----~~---~~~~---~~~~~~~~----------------------~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i 116 (148)
. +. ++++ .+.++.+. +..++.++|||+||..++..+.+. .+++..|
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I 256 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGI 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEE
Confidence 0 00 0111 12222110 135799999999999999888765 6799999
Q ss_pred EecccccC
Q 032072 117 YLAATMLK 124 (148)
Q Consensus 117 ~~~~~~~~ 124 (148)
++++-..+
T Consensus 257 ~LD~W~~P 264 (379)
T PF03403_consen 257 LLDPWMFP 264 (379)
T ss_dssp EES---TT
T ss_pred EeCCcccC
Confidence 99986643
No 122
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.91 E-value=1.5e-08 Score=70.05 Aligned_cols=119 Identities=16% Similarity=0.192 Sum_probs=69.4
Q ss_pred CceeeEEEeeCCC---CCCC-CeEEEEccCCCCccchH-HHH-------HHHHhCCcEEEEEecCC-CCCCCCCCCCCcc
Q 032072 2 GEEINMREIKKPA---EVQK-PHFVLVHGISGGAWCWY-KVR-------CLMENSGYKVSCINLKG-SGTDPSDANSIHS 68 (148)
Q Consensus 2 g~~~~~~~~~~~~---~~~~-~~vl~~hG~~~~~~~~~-~~~-------~~l~~~~~~v~~~d~~g-~g~s~~~~~~~~~ 68 (148)
|.++.|+-+.+.. .++. |.|+|+||.+.....-. .+. ....+.++-|++|.+.- +..++..+ ..-
T Consensus 171 gneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t--~~~ 248 (387)
T COG4099 171 GNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKT--LLY 248 (387)
T ss_pred CceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccccc--chh
Confidence 4567777665421 2233 99999999987554322 221 11222333444554221 11122211 111
Q ss_pred hhhhHHHHHHHHHhcC--CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 69 FDDYNKPLMDFMSSLT--DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 69 ~~~~~~~~~~~~~~~~--~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
.....+.+.+.+.+.. +..||+++|.|+||..++.++.++|+.+.+.+++++..
T Consensus 249 l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 249 LIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred HHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 2222333332333322 35799999999999999999999999999999998764
No 123
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.90 E-value=6e-08 Score=68.78 Aligned_cols=114 Identities=17% Similarity=0.193 Sum_probs=74.8
Q ss_pred eeEEEeeC--CCCCCCCeEEEEccCC---CCccch-HHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHH
Q 032072 5 INMREIKK--PAEVQKPHFVLVHGIS---GGAWCW-YKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMD 78 (148)
Q Consensus 5 ~~~~~~~~--~~~~~~~~vl~~hG~~---~~~~~~-~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~ 78 (148)
+.++.+.+ ......|+||++||.+ ++.... ..+...+...|+.|+.+|+|-.-+- ......++..+.+..
T Consensus 64 ~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~----~~p~~~~d~~~a~~~ 139 (312)
T COG0657 64 VPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH----PFPAALEDAYAAYRW 139 (312)
T ss_pred eeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC----CCCchHHHHHHHHHH
Confidence 33444544 2233579999999987 334434 4556666678999999999964332 122444554444443
Q ss_pred HHHh---cC-CCCcEEEEEeChhHHHHHHHHHhhch----hhceeeEecccc
Q 032072 79 FMSS---LT-DNEKVILVGHSAGGLSITQASHKFGN----KIRLAVYLAATM 122 (148)
Q Consensus 79 ~~~~---~~-~~~~i~lvG~S~Gg~~a~~~~~~~~~----~i~~~i~~~~~~ 122 (148)
+.+. +. +.++|.++|+|.||.++..++....+ .....+++.+..
T Consensus 140 l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~ 191 (312)
T COG0657 140 LRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLL 191 (312)
T ss_pred HHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEeccc
Confidence 3333 32 36899999999999999999886654 467777777754
No 124
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.88 E-value=1.1e-08 Score=66.77 Aligned_cols=98 Identities=13% Similarity=0.120 Sum_probs=75.4
Q ss_pred CeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC---CCCcEEEEEeC
Q 032072 19 PHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT---DNEKVILVGHS 95 (148)
Q Consensus 19 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~lvG~S 95 (148)
..+||+.|=+|-...-..+++.|++.|+.|+.+|-+-+-++. .+.++.+.++.++++... ...+++|+|+|
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~------rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSE------RTPEQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhh------CCHHHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 357888888887766678999999999999999987665543 344555555555555542 26899999999
Q ss_pred hhHHHHHHHHHhhch----hhceeeEecccc
Q 032072 96 AGGLSITQASHKFGN----KIRLAVYLAATM 122 (148)
Q Consensus 96 ~Gg~~a~~~~~~~~~----~i~~~i~~~~~~ 122 (148)
+|+-+.-....+.|. +|..++++++..
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 999888888887774 689999998765
No 125
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.87 E-value=1.3e-08 Score=71.66 Aligned_cols=103 Identities=17% Similarity=0.200 Sum_probs=72.8
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC-CCCcEEEEEeC
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT-DNEKVILVGHS 95 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~lvG~S 95 (148)
.+..|||+-|..+..+-- -....++ .||.|+.++.||++.|+..+-...+.+..-..+.-.++.+. ..+.|++.|+|
T Consensus 242 gq~LvIC~EGNAGFYEvG-~m~tP~~-lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWS 319 (517)
T KOG1553|consen 242 GQDLVICFEGNAGFYEVG-VMNTPAQ-LGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWS 319 (517)
T ss_pred CceEEEEecCCccceEee-eecChHH-hCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEee
Confidence 456888888877654321 1223344 79999999999999988766433333333333444555553 36899999999
Q ss_pred hhHHHHHHHHHhhchhhceeeEecccc
Q 032072 96 AGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 96 ~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
.||.-+..+|..+|+ ++++|+-+++.
T Consensus 320 IGGF~~~waAs~YPd-VkavvLDAtFD 345 (517)
T KOG1553|consen 320 IGGFPVAWAASNYPD-VKAVVLDATFD 345 (517)
T ss_pred cCCchHHHHhhcCCC-ceEEEeecchh
Confidence 999999999999996 88887776653
No 126
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.86 E-value=2.8e-08 Score=76.23 Aligned_cols=109 Identities=17% Similarity=0.177 Sum_probs=72.1
Q ss_pred CCCCeEEEEccCCCCccchHHHHHHHHh----------------CCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHH
Q 032072 16 VQKPHFVLVHGISGGAWCWYKVRCLMEN----------------SGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDF 79 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~----------------~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~ 79 (148)
.++.||+|++|..|+..+.+.++..... ..++.+++|+-+--. .-......+++|-+.++
T Consensus 87 lsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~t----Am~G~~l~dQtEYV~dA 162 (973)
T KOG3724|consen 87 LSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFT----AMHGHILLDQTEYVNDA 162 (973)
T ss_pred CCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhh----hhccHhHHHHHHHHHHH
Confidence 3567999999999999988877665541 134556666543111 11224555666655555
Q ss_pred HHhc----C--------CCCcEEEEEeChhHHHHHHHHHh---hchhhceeeEecccccCCCCc
Q 032072 80 MSSL----T--------DNEKVILVGHSAGGLSITQASHK---FGNKIRLAVYLAATMLKLGFC 128 (148)
Q Consensus 80 ~~~~----~--------~~~~i~lvG~S~Gg~~a~~~~~~---~~~~i~~~i~~~~~~~~~~~~ 128 (148)
++.. + .+..|+++||||||.+|...+.. .++.|.-++.+++|.....+.
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a~Pl~ 226 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAAPPLP 226 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccCCCCC
Confidence 5432 1 13469999999999999988763 245788899999888655554
No 127
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.84 E-value=9.5e-08 Score=69.61 Aligned_cols=102 Identities=13% Similarity=0.150 Sum_probs=78.8
Q ss_pred CCeEEEEccCCCCccc-hHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeCh
Q 032072 18 KPHFVLVHGISGGAWC-WYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSA 96 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~~-~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~ 96 (148)
.++||++..+.+.... .+.+.+.|.+ |+.|+..|+..-+..... ....+++++.+.+.++++.+. .+ +.++|+|+
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~-~~~f~ldDYi~~l~~~i~~~G-~~-v~l~GvCq 177 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLS-AGKFDLEDYIDYLIEFIRFLG-PD-IHVIAVCQ 177 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchh-cCCCCHHHHHHHHHHHHHHhC-CC-CcEEEEch
Confidence 3789999888765443 3567888886 999999999876533211 234788999999999998885 44 99999999
Q ss_pred hHHHHHHHHHhh-----chhhceeeEeccccc
Q 032072 97 GGLSITQASHKF-----GNKIRLAVYLAATML 123 (148)
Q Consensus 97 Gg~~a~~~~~~~-----~~~i~~~i~~~~~~~ 123 (148)
||..++.++... |.+++.+++++++.-
T Consensus 178 gG~~~laa~Al~a~~~~p~~~~sltlm~~PID 209 (406)
T TIGR01849 178 PAVPVLAAVALMAENEPPAQPRSMTLMGGPID 209 (406)
T ss_pred hhHHHHHHHHHHHhcCCCCCcceEEEEecCcc
Confidence 999988777655 557999999998874
No 128
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.82 E-value=1.8e-08 Score=72.13 Aligned_cols=102 Identities=25% Similarity=0.323 Sum_probs=75.3
Q ss_pred CCeEEEEccCCCCccchHHHHHHHHhCCcE---EEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEe
Q 032072 18 KPHFVLVHGISGGAWCWYKVRCLMENSGYK---VSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGH 94 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~---v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~ 94 (148)
.-+++++||+......|..+...+...++. ++.++.++.. .........++....+.+.+.... .+++.++||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~ql~~~V~~~l~~~g-a~~v~LigH 134 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGD---GTYSLAVRGEQLFAYVDEVLAKTG-AKKVNLIGH 134 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccC---CCccccccHHHHHHHHHHHHhhcC-CCceEEEee
Confidence 459999999988888888877767766666 7777777551 111122344455555555555554 689999999
Q ss_pred ChhHHHHHHHHHhhc--hhhceeeEeccccc
Q 032072 95 SAGGLSITQASHKFG--NKIRLAVYLAATML 123 (148)
Q Consensus 95 S~Gg~~a~~~~~~~~--~~i~~~i~~~~~~~ 123 (148)
||||.++..++...+ .+++.++.++++..
T Consensus 135 S~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 135 SMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred cccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 999999999998888 78999999998874
No 129
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.81 E-value=7.8e-08 Score=63.70 Aligned_cols=98 Identities=19% Similarity=0.242 Sum_probs=71.0
Q ss_pred EEccCC--CCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHHH
Q 032072 23 LVHGIS--GGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLS 100 (148)
Q Consensus 23 ~~hG~~--~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~ 100 (148)
++|..+ ++...|..+...+. ..+.++.++.+|++.+.... .+.++.++...+.+....+..++.++|||+||.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~ 77 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALR-GRRDVSALPLPGFGPGEPLP---ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLL 77 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcC-CCccEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHH
Confidence 455544 56677888888887 57899999999997654332 4566666665555555444678999999999999
Q ss_pred HHHHHHhh---chhhceeeEecccccC
Q 032072 101 ITQASHKF---GNKIRLAVYLAATMLK 124 (148)
Q Consensus 101 a~~~~~~~---~~~i~~~i~~~~~~~~ 124 (148)
+...+.+. +..+.+++++++..+.
T Consensus 78 a~~~a~~l~~~~~~~~~l~~~~~~~~~ 104 (212)
T smart00824 78 AHAVAARLEARGIPPAAVVLLDTYPPG 104 (212)
T ss_pred HHHHHHHHHhCCCCCcEEEEEccCCCC
Confidence 99888864 3468888888775543
No 130
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.78 E-value=9.5e-08 Score=67.70 Aligned_cols=107 Identities=19% Similarity=0.241 Sum_probs=69.1
Q ss_pred CCCCeEEEEccCCCCcc-chHHHHHHHHhCCc--EEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhc---CCCCcE
Q 032072 16 VQKPHFVLVHGISGGAW-CWYKVRCLMENSGY--KVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSL---TDNEKV 89 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~-~~~~~~~~l~~~~~--~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i 89 (148)
..+.+++|+||+..+.. .-.+.++.+.+.|+ .++.+.||+.|.-....-+..+.+.-..+++.+++.+ .+.++|
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 46779999999987544 34566666666554 5788899987754332212122222233344444433 346899
Q ss_pred EEEEeChhHHHHHHHHHhh--------chhhceeeEecccc
Q 032072 90 ILVGHSAGGLSITQASHKF--------GNKIRLAVYLAATM 122 (148)
Q Consensus 90 ~lvG~S~Gg~~a~~~~~~~--------~~~i~~~i~~~~~~ 122 (148)
.+++||||..+++..+.+. +.+|+-+|+-++-.
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 9999999999999887743 44688877776643
No 131
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.76 E-value=1.1e-07 Score=66.45 Aligned_cols=108 Identities=17% Similarity=0.227 Sum_probs=63.2
Q ss_pred CCCeEEEEccCCCCc---cchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhc---C----CC
Q 032072 17 QKPHFVLVHGISGGA---WCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSL---T----DN 86 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~---~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~---~----~~ 86 (148)
.+..|||+.|++... .....+++.|.+.+|.++-+.+++..... ...+.++.++++.++++.+ . ..
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~----G~~SL~~D~~eI~~~v~ylr~~~~g~~~~ 107 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGW----GTSSLDRDVEEIAQLVEYLRSEKGGHFGR 107 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-----S--HHHHHHHHHHHHHHHHHHS------
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCc----CcchhhhHHHHHHHHHHHHHHhhccccCC
Confidence 456899999998643 33456888887789999999877421111 1134455555554444433 1 25
Q ss_pred CcEEEEEeChhHHHHHHHHHhhc-----hhhceeeEecccccCCCCc
Q 032072 87 EKVILVGHSAGGLSITQASHKFG-----NKIRLAVYLAATMLKLGFC 128 (148)
Q Consensus 87 ~~i~lvG~S~Gg~~a~~~~~~~~-----~~i~~~i~~~~~~~~~~~~ 128 (148)
++|+|+|||-|+.-++.|+.... ..|+++|+-+|..-.+...
T Consensus 108 ~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~ 154 (303)
T PF08538_consen 108 EKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAIL 154 (303)
T ss_dssp S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTT
T ss_pred ccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhh
Confidence 79999999999999999998653 4699999999877555443
No 132
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.76 E-value=5.6e-08 Score=66.69 Aligned_cols=121 Identities=13% Similarity=0.163 Sum_probs=67.7
Q ss_pred CCceeeEEEeeCCC---CCCCCeEEEEccCCCCccch--HHHHHHHHhCC----cEEEEEecCCCCCCC----------C
Q 032072 1 MGEEINMREIKKPA---EVQKPHFVLVHGISGGAWCW--YKVRCLMENSG----YKVSCINLKGSGTDP----------S 61 (148)
Q Consensus 1 ~g~~~~~~~~~~~~---~~~~~~vl~~hG~~~~~~~~--~~~~~~l~~~~----~~v~~~d~~g~g~s~----------~ 61 (148)
+|....+..+-++. .+.-|+|+++||.......+ ......+.+.+ ..+++++..+..... .
T Consensus 4 Lg~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~ 83 (251)
T PF00756_consen 4 LGRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSR 83 (251)
T ss_dssp TTEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTC
T ss_pred cCCeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEeccccccccccccccccccc
Confidence 35556565554443 33448999999972222222 22333333322 334555554443110 0
Q ss_pred CCCCCc---ch-hhhHHHHHHHHHhcCC--CCcEEEEEeChhHHHHHHHHHhhchhhceeeEeccc
Q 032072 62 DANSIH---SF-DDYNKPLMDFMSSLTD--NEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAAT 121 (148)
Q Consensus 62 ~~~~~~---~~-~~~~~~~~~~~~~~~~--~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~ 121 (148)
...... .. .-..+++...++.... ..+..++|+||||..|+.++.++|+.+.+++.+++.
T Consensus 84 ~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 84 RADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp BCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred ccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 000001 11 1223345555554421 123899999999999999999999999999999965
No 133
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.74 E-value=7.8e-07 Score=63.49 Aligned_cols=111 Identities=16% Similarity=0.142 Sum_probs=78.1
Q ss_pred CCCCeEEEEccCCC-----CccchHHHHHHH-HhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHh-----cC
Q 032072 16 VQKPHFVLVHGISG-----GAWCWYKVRCLM-ENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSS-----LT 84 (148)
Q Consensus 16 ~~~~~vl~~hG~~~-----~~~~~~~~~~~l-~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~-----~~ 84 (148)
...|.||++||.|- ....+..+...+ .+.+..++.+|+|-.-+ ...+...+|..+.+..+.+. -.
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPE----h~~Pa~y~D~~~Al~w~~~~~~~~~~~ 163 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPE----HPFPAAYDDGWAALKWVLKNSWLKLGA 163 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCC----CCCCccchHHHHHHHHHHHhHHHHhCC
Confidence 35689999999873 244455666655 45788899999884322 22335556666666555553 23
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhhc------hhhceeeEecccccCCCCcch
Q 032072 85 DNEKVILVGHSAGGLSITQASHKFG------NKIRLAVYLAATMLKLGFCTD 130 (148)
Q Consensus 85 ~~~~i~lvG~S~Gg~~a~~~~~~~~------~~i~~~i~~~~~~~~~~~~~~ 130 (148)
+.++|+++|-|.||.++..++.+.- -++++.|++-|..........
T Consensus 164 D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~ 215 (336)
T KOG1515|consen 164 DPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTES 215 (336)
T ss_pred CcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCH
Confidence 5688999999999999999988553 479999999998876655444
No 134
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.74 E-value=6.6e-07 Score=65.79 Aligned_cols=108 Identities=12% Similarity=0.180 Sum_probs=65.8
Q ss_pred CCCCeEEEEccCCCC-ccchHHHHHHHHhCCc----EEEEEecCCCCCCCCCCCCCc-chhhhHHHHHHHHHhc----CC
Q 032072 16 VQKPHFVLVHGISGG-AWCWYKVRCLMENSGY----KVSCINLKGSGTDPSDANSIH-SFDDYNKPLMDFMSSL----TD 85 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~-~~~~~~~~~~l~~~~~----~v~~~d~~g~g~s~~~~~~~~-~~~~~~~~~~~~~~~~----~~ 85 (148)
++.|+|+++||-.-. ..........|.+.|. .++.+|............... ..+.+.+++.-++++. .+
T Consensus 207 ~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d 286 (411)
T PRK10439 207 EERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSDD 286 (411)
T ss_pred CCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 456899999995421 1122334455554552 346666432111111111111 1223345555555543 23
Q ss_pred CCcEEEEEeChhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 86 NEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
.++.++.|+||||..++.++.++|+.|.+++.+++..+
T Consensus 287 ~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~w 324 (411)
T PRK10439 287 ADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFW 324 (411)
T ss_pred ccceEEEEEChHHHHHHHHHHhCcccccEEEEecccee
Confidence 56789999999999999999999999999999998764
No 135
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.72 E-value=5.2e-07 Score=61.03 Aligned_cols=107 Identities=21% Similarity=0.272 Sum_probs=80.6
Q ss_pred CCCCeEEEEccCCCCccchHHHHHHHHhCC---cEEEEEecCCCCCCC---C---C--CCCCcchhhhHHHHHHHHHhcC
Q 032072 16 VQKPHFVLVHGISGGAWCWYKVRCLMENSG---YKVSCINLKGSGTDP---S---D--ANSIHSFDDYNKPLMDFMSSLT 84 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~---~~v~~~d~~g~g~s~---~---~--~~~~~~~~~~~~~~~~~~~~~~ 84 (148)
..++.+++++|..|....|..+++.|...- ..+|.+..-||..-+ . . ....++.+++.+.-.+++++..
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~ 106 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYV 106 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhC
Confidence 457899999999999999999998887532 348888777764222 1 0 1134688888998889998874
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhh--chhhceeeEecccc
Q 032072 85 -DNEKVILVGHSAGGLSITQASHKF--GNKIRLAVYLAATM 122 (148)
Q Consensus 85 -~~~~i~lvG~S~Gg~~a~~~~~~~--~~~i~~~i~~~~~~ 122 (148)
...+++++|||-|+++.+.++... .-.+.+++++-|+.
T Consensus 107 Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 107 PKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred CCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 357899999999999999988732 22578888887765
No 136
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.71 E-value=3.9e-07 Score=61.73 Aligned_cols=106 Identities=27% Similarity=0.264 Sum_probs=71.8
Q ss_pred CCeEEEEccCCCCccchHHHHHHHHhCC-----cEEEEEecCCC----CCCCCCC----------CCCcchhhhHHHHHH
Q 032072 18 KPHFVLVHGISGGAWCWYKVRCLMENSG-----YKVSCINLKGS----GTDPSDA----------NSIHSFDDYNKPLMD 78 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~~~~~~~~~l~~~~-----~~v~~~d~~g~----g~s~~~~----------~~~~~~~~~~~~~~~ 78 (148)
.-|.||+||++|+......+.++|...+ .-+..+|..|. |.-+.+. ....+..++...+..
T Consensus 45 ~iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 45 AIPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred ccceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 3589999999999999999998887433 12455565552 1111111 012233344444444
Q ss_pred HHHhc---CCCCcEEEEEeChhHHHHHHHHHhhch-----hhceeeEeccccc
Q 032072 79 FMSSL---TDNEKVILVGHSAGGLSITQASHKFGN-----KIRLAVYLAATML 123 (148)
Q Consensus 79 ~~~~~---~~~~~i~lvG~S~Gg~~a~~~~~~~~~-----~i~~~i~~~~~~~ 123 (148)
.+..| ...+++.+|||||||.-...|+..+.. .+++++.+++++.
T Consensus 125 ~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 125 AMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 44444 457899999999999999999887643 5999999999886
No 137
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.68 E-value=1.1e-07 Score=63.71 Aligned_cols=87 Identities=17% Similarity=0.363 Sum_probs=61.6
Q ss_pred eEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCC--CCcchhhhHH-HHHHHHHhc---CCCCcEEEEE
Q 032072 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDAN--SIHSFDDYNK-PLMDFMSSL---TDNEKVILVG 93 (148)
Q Consensus 20 ~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~--~~~~~~~~~~-~~~~~~~~~---~~~~~i~lvG 93 (148)
-+++-.+.+.....|++++..+...||.|++.|+||.|.|.+... ......||+. ++-..+..+ .+..+.+.||
T Consensus 32 ~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vg 111 (281)
T COG4757 32 RLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVG 111 (281)
T ss_pred cEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEee
Confidence 455555556677778889999999999999999999998876432 2345555543 333333332 2468999999
Q ss_pred eChhHHHHHHHHH
Q 032072 94 HSAGGLSITQASH 106 (148)
Q Consensus 94 ~S~Gg~~a~~~~~ 106 (148)
||+||.+...+.+
T Consensus 112 HS~GGqa~gL~~~ 124 (281)
T COG4757 112 HSFGGQALGLLGQ 124 (281)
T ss_pred ccccceeeccccc
Confidence 9999998776654
No 138
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.68 E-value=5e-07 Score=63.82 Aligned_cols=101 Identities=22% Similarity=0.250 Sum_probs=70.2
Q ss_pred eeeEEEeeCCCCCCCCeEEEEccCCCCccch-------HHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHH
Q 032072 4 EINMREIKKPAEVQKPHFVLVHGISGGAWCW-------YKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPL 76 (148)
Q Consensus 4 ~~~~~~~~~~~~~~~~~vl~~hG~~~~~~~~-------~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~ 76 (148)
.+....+..+..+...-++++-|.++.-+.. ..+.+...+.+.+|+++++||.|.|+... +.++++++-
T Consensus 123 ~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~----s~~dLv~~~ 198 (365)
T PF05677_consen 123 KIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP----SRKDLVKDY 198 (365)
T ss_pred EEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC----CHHHHHHHH
Confidence 4444445444444566889998888755441 23445555678999999999999997764 346666665
Q ss_pred HHHHHhcC------CCCcEEEEEeChhHHHHHHHHHhh
Q 032072 77 MDFMSSLT------DNEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 77 ~~~~~~~~------~~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
.+.++.+. ..+.|++-|||+||.++..++.++
T Consensus 199 ~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 199 QACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 55555542 247899999999999998877755
No 139
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.68 E-value=6.4e-07 Score=60.54 Aligned_cols=117 Identities=9% Similarity=0.183 Sum_probs=67.7
Q ss_pred CceeeEEEeeCCCC--CCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCC-CCCCCCCCCCcchhhhHHH---
Q 032072 2 GEEINMREIKKPAE--VQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGS-GTDPSDANSIHSFDDYNKP--- 75 (148)
Q Consensus 2 g~~~~~~~~~~~~~--~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~-g~s~~~~~~~~~~~~~~~~--- 75 (148)
|+++.+++..+... +..++|++.+|++-.-..+..++..|...||.|+-+|.-.| |.|+... ..+++....+.
T Consensus 12 ~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I-~eftms~g~~sL~~ 90 (294)
T PF02273_consen 12 GRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDI-NEFTMSIGKASLLT 90 (294)
T ss_dssp TEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B--------------HHHHHHHHHH
T ss_pred CCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCCh-hhcchHHhHHHHHH
Confidence 67888888766543 35589999999999999999999999999999999997755 6666554 23556555444
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 76 LMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 76 ~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+.++++... ..++.++.-|+-|.+|+..+.+- .+..+|+..+..
T Consensus 91 V~dwl~~~g-~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVV 134 (294)
T PF02273_consen 91 VIDWLATRG-IRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVV 134 (294)
T ss_dssp HHHHHHHTT----EEEEEETTHHHHHHHHTTTS----SEEEEES--S
T ss_pred HHHHHHhcC-CCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeee
Confidence 445555444 78899999999999999999854 366666666554
No 140
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.66 E-value=8.7e-08 Score=66.72 Aligned_cols=107 Identities=19% Similarity=0.321 Sum_probs=70.6
Q ss_pred CCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCC-----CC-C---------------CCc----chh
Q 032072 16 VQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPS-----DA-N---------------SIH----SFD 70 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~-----~~-~---------------~~~----~~~ 70 (148)
.+-|+|||-||++++...|..+.-.|+..||.|.+++.|....... .+ . ... .-+
T Consensus 116 ~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNe 195 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNE 195 (399)
T ss_pred CCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCH
Confidence 3459999999999999999999889998999999999987643311 00 0 000 001
Q ss_pred hhHHHH------HHHHHhcC-----------------------CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEeccc
Q 032072 71 DYNKPL------MDFMSSLT-----------------------DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAAT 121 (148)
Q Consensus 71 ~~~~~~------~~~~~~~~-----------------------~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~ 121 (148)
+..++. ..+++++. +-.++.++|||+||..+...+..+. .++..|++++=
T Consensus 196 qv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~W 274 (399)
T KOG3847|consen 196 QVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAW 274 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeeee
Confidence 111111 12222221 1247899999999999988877654 47777877764
Q ss_pred cc
Q 032072 122 ML 123 (148)
Q Consensus 122 ~~ 123 (148)
+.
T Consensus 275 M~ 276 (399)
T KOG3847|consen 275 MF 276 (399)
T ss_pred ec
Confidence 43
No 141
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.65 E-value=1.2e-07 Score=63.74 Aligned_cols=106 Identities=14% Similarity=0.191 Sum_probs=53.7
Q ss_pred CCCeEEEEccCCCCccchHHH----HHHHHhCCcEEEEEecCCCC-----CCC-----------CCC-----------CC
Q 032072 17 QKPHFVLVHGISGGAWCWYKV----RCLMENSGYKVSCINLKGSG-----TDP-----------SDA-----------NS 65 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~----~~~l~~~~~~v~~~d~~g~g-----~s~-----------~~~-----------~~ 65 (148)
+++-|||+||++++...+... .+.|.+.++.++.+|-|--- -.. ..+ ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 578899999999999887654 44444337888888865321 000 000 01
Q ss_pred CcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhc--------hhhceeeEecccccC
Q 032072 66 IHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFG--------NKIRLAVYLAATMLK 124 (148)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~--------~~i~~~i~~~~~~~~ 124 (148)
...+++..+.+.+.+++.. .-..++|+|+||.++..++.... ..++-+|++++..+.
T Consensus 83 ~~~~~~sl~~l~~~i~~~G--PfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~ 147 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENG--PFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPP 147 (212)
T ss_dssp G---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----E
T ss_pred ccCHHHHHHHHHHHHHhcC--CeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCC
Confidence 1234455556666666644 24679999999999998886432 247888999887653
No 142
>PRK04940 hypothetical protein; Provisional
Probab=98.63 E-value=4.8e-07 Score=58.81 Aligned_cols=88 Identities=11% Similarity=0.143 Sum_probs=53.8
Q ss_pred EEEEccCCCCccc--hHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCC---CCcEEEEEeC
Q 032072 21 FVLVHGISGGAWC--WYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTD---NEKVILVGHS 95 (148)
Q Consensus 21 vl~~hG~~~~~~~--~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~lvG~S 95 (148)
||++||+.+++.. ... +.+. .+.+|.+-...+ .....+.++.+.+.+..+.. .+++.+||.|
T Consensus 2 IlYlHGF~SS~~S~~~Ka--~~l~-----~~~p~~~~~~l~------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSS 68 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKV--LQLQ-----FIDPDVRLISYS------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGVG 68 (180)
T ss_pred EEEeCCCCCCCCccHHHH--Hhhe-----eeCCCCeEEECC------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEeC
Confidence 7899999998776 322 1111 112222211010 13344455555555554221 2579999999
Q ss_pred hhHHHHHHHHHhhchhhceeeEecccccC
Q 032072 96 AGGLSITQASHKFGNKIRLAVYLAATMLK 124 (148)
Q Consensus 96 ~Gg~~a~~~~~~~~~~i~~~i~~~~~~~~ 124 (148)
+||+.|..++.++. + +.|+++|...+
T Consensus 69 LGGyyA~~La~~~g--~-~aVLiNPAv~P 94 (180)
T PRK04940 69 LGGYWAERIGFLCG--I-RQVIFNPNLFP 94 (180)
T ss_pred hHHHHHHHHHHHHC--C-CEEEECCCCCh
Confidence 99999999999886 3 56899987643
No 143
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.62 E-value=3e-07 Score=69.48 Aligned_cols=106 Identities=22% Similarity=0.206 Sum_probs=76.0
Q ss_pred CCCCeEEEEccCCCCcc-----chHH--HHHHHHhCCcEEEEEecCCCCCCCC-------CCCCCcchhhhHHHHHHHHH
Q 032072 16 VQKPHFVLVHGISGGAW-----CWYK--VRCLMENSGYKVSCINLKGSGTDPS-------DANSIHSFDDYNKPLMDFMS 81 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~-----~~~~--~~~~l~~~~~~v~~~d~~g~g~s~~-------~~~~~~~~~~~~~~~~~~~~ 81 (148)
++.|+++++-|..+-.. .+.. -...|+..||.|+++|-||..+... ..-....++|+++.+.-+.+
T Consensus 640 kkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Lae 719 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAE 719 (867)
T ss_pred CCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHH
Confidence 34689999998876322 1221 2346777999999999998644321 11234577888888887777
Q ss_pred hcC--CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEeccc
Q 032072 82 SLT--DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAAT 121 (148)
Q Consensus 82 ~~~--~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~ 121 (148)
+.. +.++|.+-|+|+||++++..+.++|+-++.+|.=+|.
T Consensus 720 q~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapV 761 (867)
T KOG2281|consen 720 QTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPV 761 (867)
T ss_pred hcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcc
Confidence 763 4689999999999999999999999866654444443
No 144
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.60 E-value=1.3e-06 Score=62.16 Aligned_cols=106 Identities=13% Similarity=0.198 Sum_probs=72.8
Q ss_pred CCCCeEEEEccCCCCccchH-HH-HHHHHhCCcEEEEEecCCCCCCCCCCCC---Ccchhhh----------HHHHHHHH
Q 032072 16 VQKPHFVLVHGISGGAWCWY-KV-RCLMENSGYKVSCINLKGSGTDPSDANS---IHSFDDY----------NKPLMDFM 80 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~~~-~~-~~~l~~~~~~v~~~d~~g~g~s~~~~~~---~~~~~~~----------~~~~~~~~ 80 (148)
+.+|++|.++|.|......+ .+ +..|.+.|+..+.+..|.||...+.... ..+..|. ...+...+
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 46788888888776443322 23 6777778999999999999876654321 1222222 12233444
Q ss_pred HhcCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 81 SSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 81 ~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
++- +..++.+.|.||||.+|...+...|..+..+-.+++..
T Consensus 170 ~~~-G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~s 210 (348)
T PF09752_consen 170 ERE-GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSS 210 (348)
T ss_pred Hhc-CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccC
Confidence 444 47899999999999999999999998777665565544
No 145
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.58 E-value=8.7e-07 Score=65.27 Aligned_cols=108 Identities=21% Similarity=0.138 Sum_probs=68.3
Q ss_pred CCCCeEEEEccCC---CCccchHHHHHHHHhCC-cEEEEEecCC----CC-CCC----CCCCCCcchhhh---HHHHHHH
Q 032072 16 VQKPHFVLVHGIS---GGAWCWYKVRCLMENSG-YKVSCINLKG----SG-TDP----SDANSIHSFDDY---NKPLMDF 79 (148)
Q Consensus 16 ~~~~~vl~~hG~~---~~~~~~~~~~~~l~~~~-~~v~~~d~~g----~g-~s~----~~~~~~~~~~~~---~~~~~~~ 79 (148)
.+.|++|+|||.+ |+......--..|++.| +.++.+++|= +- .+. ..........|+ .+++++.
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~N 171 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDN 171 (491)
T ss_pred CCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHH
Confidence 4569999999986 33333222234566666 8888888872 10 111 011111334443 4566777
Q ss_pred HHhcC-CCCcEEEEEeChhHHHHHHHHHh--hchhhceeeEeccccc
Q 032072 80 MSSLT-DNEKVILVGHSAGGLSITQASHK--FGNKIRLAVYLAATML 123 (148)
Q Consensus 80 ~~~~~-~~~~i~lvG~S~Gg~~a~~~~~~--~~~~i~~~i~~~~~~~ 123 (148)
|.... +..+|.|+|+|.|++.++.++.. ....++++|+.++...
T Consensus 172 Ie~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 172 IEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 77774 56899999999999877776652 2346999999988764
No 146
>PLN02606 palmitoyl-protein thioesterase
Probab=98.58 E-value=7.6e-07 Score=62.20 Aligned_cols=103 Identities=19% Similarity=0.243 Sum_probs=70.0
Q ss_pred CCCeEEEEccCC--CCccchHHHHHHHHh-CCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCC-CCcEEEE
Q 032072 17 QKPHFVLVHGIS--GGAWCWYKVRCLMEN-SGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTD-NEKVILV 92 (148)
Q Consensus 17 ~~~~vl~~hG~~--~~~~~~~~~~~~l~~-~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~lv 92 (148)
...|||+.||++ +....+..+.+.+.+ .+..+.++. -|.+. ......++.++++.+.+.+...+. ..-+.++
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~~~L~~G~naI 100 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQMKELSEGYNIV 100 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcchhhcCceEEE
Confidence 457999999999 566677778777752 355544444 22221 111113455666665555555321 2469999
Q ss_pred EeChhHHHHHHHHHhhch--hhceeeEeccccc
Q 032072 93 GHSAGGLSITQASHKFGN--KIRLAVYLAATML 123 (148)
Q Consensus 93 G~S~Gg~~a~~~~~~~~~--~i~~~i~~~~~~~ 123 (148)
|+|+||.++..++.+.|+ .|+.+|.++++..
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 999999999999999876 5999999998874
No 147
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.54 E-value=6.1e-07 Score=59.16 Aligned_cols=104 Identities=17% Similarity=0.235 Sum_probs=70.7
Q ss_pred CCCCeEEEEccCC---CCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEE
Q 032072 16 VQKPHFVLVHGIS---GGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILV 92 (148)
Q Consensus 16 ~~~~~vl~~hG~~---~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lv 92 (148)
.+.+..||+||.- ++...--.....+.+.||+|..+++- .+........++.+...-+.-+++.....+.+.+-
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~---l~~q~htL~qt~~~~~~gv~filk~~~n~k~l~~g 141 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYN---LCPQVHTLEQTMTQFTHGVNFILKYTENTKVLTFG 141 (270)
T ss_pred CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccC---cCcccccHHHHHHHHHHHHHHHHHhcccceeEEEc
Confidence 3678999999853 34433334555566689999888743 33333222245555555566566666656778899
Q ss_pred EeChhHHHHHHHHHhh-chhhceeeEecccc
Q 032072 93 GHSAGGLSITQASHKF-GNKIRLAVYLAATM 122 (148)
Q Consensus 93 G~S~Gg~~a~~~~~~~-~~~i~~~i~~~~~~ 122 (148)
|||.|+++++.+..+. ..+|.+++++++..
T Consensus 142 GHSaGAHLa~qav~R~r~prI~gl~l~~GvY 172 (270)
T KOG4627|consen 142 GHSAGAHLAAQAVMRQRSPRIWGLILLCGVY 172 (270)
T ss_pred ccchHHHHHHHHHHHhcCchHHHHHHHhhHh
Confidence 9999999999887743 44799999888765
No 148
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.53 E-value=7e-07 Score=63.70 Aligned_cols=90 Identities=22% Similarity=0.255 Sum_probs=60.9
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCC--CCCCCCCCC--cch---hhhHHH---HHHHHHhc---
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSG--TDPSDANSI--HSF---DDYNKP---LMDFMSSL--- 83 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g--~s~~~~~~~--~~~---~~~~~~---~~~~~~~~--- 83 (148)
..|+|++-||.++....+.-.++.+.+.||.|..++.+|-. ......... +.. .+..++ +.+.+.++
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~s 149 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTAS 149 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcC
Confidence 45899999999999999999999999999999999999842 221111110 111 111112 22222222
Q ss_pred C------CCCcEEEEEeChhHHHHHHHHH
Q 032072 84 T------DNEKVILVGHSAGGLSITQASH 106 (148)
Q Consensus 84 ~------~~~~i~lvG~S~Gg~~a~~~~~ 106 (148)
+ +..+|.++|||+||..++..+.
T Consensus 150 P~l~~~ld~~~Vgv~GhS~GG~T~m~laG 178 (365)
T COG4188 150 PALAGRLDPQRVGVLGHSFGGYTAMELAG 178 (365)
T ss_pred cccccccCccceEEEecccccHHHHHhcc
Confidence 1 3468999999999999998865
No 149
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.52 E-value=9.4e-06 Score=57.67 Aligned_cols=113 Identities=11% Similarity=0.080 Sum_probs=73.3
Q ss_pred CCCCCCeEEEEccCCCCcc---chHHHHHHHHhCCcEEEEEecCCCCCC--C----------C----CCCCC--------
Q 032072 14 AEVQKPHFVLVHGISGGAW---CWYKVRCLMENSGYKVSCINLKGSGTD--P----------S----DANSI-------- 66 (148)
Q Consensus 14 ~~~~~~~vl~~hG~~~~~~---~~~~~~~~l~~~~~~v~~~d~~g~g~s--~----------~----~~~~~-------- 66 (148)
..+....||++|+.+.+.. ....+-+.|.+.|+..+.+.+|.--.. . . .....
T Consensus 83 ~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 162 (310)
T PF12048_consen 83 SAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPAS 162 (310)
T ss_pred CCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCcccc
Confidence 3445679999999998764 344566778889999999888862100 0 0 00000
Q ss_pred --------cchhhhHHHHHHHHHhcC--CCCcEEEEEeChhHHHHHHHHHhhch-hhceeeEecccccCCC
Q 032072 67 --------HSFDDYNKPLMDFMSSLT--DNEKVILVGHSAGGLSITQASHKFGN-KIRLAVYLAATMLKLG 126 (148)
Q Consensus 67 --------~~~~~~~~~~~~~~~~~~--~~~~i~lvG~S~Gg~~a~~~~~~~~~-~i~~~i~~~~~~~~~~ 126 (148)
.....+.+.+.+.+..+. +..+++|+||+.|+.++..++...+. .++++|++++..+...
T Consensus 163 ~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~ 233 (310)
T PF12048_consen 163 AQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPD 233 (310)
T ss_pred ccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcch
Confidence 001122233333333332 24669999999999999999997764 5899999999876443
No 150
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.51 E-value=1.5e-06 Score=65.29 Aligned_cols=106 Identities=21% Similarity=0.223 Sum_probs=65.1
Q ss_pred CCCCeEEEEccCC---CCccchHHHHHHHHh-CC-cEEEEEecC-C---CCCCCC-CCCCCcchhhh---HHHHHHHHHh
Q 032072 16 VQKPHFVLVHGIS---GGAWCWYKVRCLMEN-SG-YKVSCINLK-G---SGTDPS-DANSIHSFDDY---NKPLMDFMSS 82 (148)
Q Consensus 16 ~~~~~vl~~hG~~---~~~~~~~~~~~~l~~-~~-~~v~~~d~~-g---~g~s~~-~~~~~~~~~~~---~~~~~~~~~~ 82 (148)
++.|++|++||.+ ++...+ ....+.. .+ +.|+.+++| | +..... .........|+ .+.+.+.+..
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 4569999999965 222222 1223332 33 889999988 3 222211 11122233343 4445555555
Q ss_pred cC-CCCcEEEEEeChhHHHHHHHHHh--hchhhceeeEeccccc
Q 032072 83 LT-DNEKVILVGHSAGGLSITQASHK--FGNKIRLAVYLAATML 123 (148)
Q Consensus 83 ~~-~~~~i~lvG~S~Gg~~a~~~~~~--~~~~i~~~i~~~~~~~ 123 (148)
.. +.++|.++|+|.||.++..++.. .+..++++|+.++...
T Consensus 171 fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 171 FGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred hCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 53 46899999999999988887765 3456999999887654
No 151
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.50 E-value=2.8e-06 Score=56.42 Aligned_cols=104 Identities=20% Similarity=0.221 Sum_probs=66.7
Q ss_pred CCeEEEEccCCC-CccchHH---------------HHHHHHhCCcEEEEEecCC---CCCCCC-CCCCCcchhhhHHHH-
Q 032072 18 KPHFVLVHGISG-GAWCWYK---------------VRCLMENSGYKVSCINLKG---SGTDPS-DANSIHSFDDYNKPL- 76 (148)
Q Consensus 18 ~~~vl~~hG~~~-~~~~~~~---------------~~~~l~~~~~~v~~~d~~g---~g~s~~-~~~~~~~~~~~~~~~- 76 (148)
...++++||.|- ...+|.+ ++++..+.||.|++.+.-. +..+.+ +.-...+..+.++-+
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 458999999984 4555643 3555566899999887541 111111 111112333333333
Q ss_pred HHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhch--hhceeeEecccc
Q 032072 77 MDFMSSLTDNEKVILVGHSAGGLSITQASHKFGN--KIRLAVYLAATM 122 (148)
Q Consensus 77 ~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~--~i~~~i~~~~~~ 122 (148)
..++.... .+.+.++.||+||..++.+..++|+ +|.++.+.++++
T Consensus 181 ~~~v~pa~-~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 181 KNIVLPAK-AESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHhcccC-cceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 33333333 6899999999999999999999985 677777777765
No 152
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.49 E-value=1.1e-06 Score=66.11 Aligned_cols=121 Identities=12% Similarity=0.080 Sum_probs=83.6
Q ss_pred CceeeEEEeeCCCCCCCCeEEEEc--cCCCCc---cchHHHHH---HHHhCCcEEEEEecCCCCCCCCCCCCCcc-hhhh
Q 032072 2 GEEINMREIKKPAEVQKPHFVLVH--GISGGA---WCWYKVRC---LMENSGYKVSCINLKGSGTDPSDANSIHS-FDDY 72 (148)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~vl~~h--G~~~~~---~~~~~~~~---~l~~~~~~v~~~d~~g~g~s~~~~~~~~~-~~~~ 72 (148)
|.++....+.+...++.|+++..+ .+.-.. ........ .+...||.|+..|.||.+.|+........ ..+.
T Consensus 29 GvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~~E~~D 108 (563)
T COG2936 29 GVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESSREAED 108 (563)
T ss_pred CeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceeccccccc
Confidence 778888777776666778888888 443221 11112222 35558999999999999999876543333 1122
Q ss_pred HHHHHHHHHhcC-CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 73 NKPLMDFMSSLT-DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 73 ~~~~~~~~~~~~-~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
.-++.+.+...+ ...+|..+|.|++|...+.+|...|...+.++.+.+..
T Consensus 109 g~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~ 159 (563)
T COG2936 109 GYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLV 159 (563)
T ss_pred hhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccc
Confidence 223444444432 35799999999999999999998888899888887765
No 153
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.47 E-value=9.4e-07 Score=58.24 Aligned_cols=106 Identities=9% Similarity=0.182 Sum_probs=73.7
Q ss_pred CCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCC-----------------CCCCCCCcchhhhHHHHHHHH
Q 032072 18 KPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTD-----------------PSDANSIHSFDDYNKPLMDFM 80 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s-----------------~~~~~~~~~~~~~~~~~~~~~ 80 (148)
...||++||.+.+...|..+.+.+.-...+.+++..|-.--+ .............++.+..++
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLI 82 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHH
Confidence 458999999999999998887777656667777754422110 000112234445555566666
Q ss_pred HhcC----CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 81 SSLT----DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 81 ~~~~----~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
++.. +..+|.+-|+||||.+++..+..++..+.+++...+..+
T Consensus 83 ~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p 129 (206)
T KOG2112|consen 83 DNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLP 129 (206)
T ss_pred HHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccc
Confidence 5542 357899999999999999999999888888887777654
No 154
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.45 E-value=3.5e-07 Score=63.30 Aligned_cols=106 Identities=14% Similarity=0.245 Sum_probs=57.7
Q ss_pred CCCeEEEEccCCCC---ccchHHHHHHHHh--CCcEEEEEecCCCCCCC-CCCCCCcchhhhHHHHHHHHHhcCC-CCcE
Q 032072 17 QKPHFVLVHGISGG---AWCWYKVRCLMEN--SGYKVSCINLKGSGTDP-SDANSIHSFDDYNKPLMDFMSSLTD-NEKV 89 (148)
Q Consensus 17 ~~~~vl~~hG~~~~---~~~~~~~~~~l~~--~~~~v~~~d~~g~g~s~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i 89 (148)
+..|||+.||++.+ +..+..+.+.+.+ .|..|.+++.-. +.++ ......-++++.++.+.+.++..+. ..-+
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~-~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~ 82 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGN-DPSEDVENSFFGNVNDQVEQVCEQLANDPELANGF 82 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSS-SHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-E
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECC-CcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcce
Confidence 45689999999964 3355555554443 466666666432 1110 0000113445666666666655431 2579
Q ss_pred EEEEeChhHHHHHHHHHhhch-hhceeeEeccccc
Q 032072 90 ILVGHSAGGLSITQASHKFGN-KIRLAVYLAATML 123 (148)
Q Consensus 90 ~lvG~S~Gg~~a~~~~~~~~~-~i~~~i~~~~~~~ 123 (148)
.++|+|+||.++..++.+.++ .|+.+|.++++..
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 999999999999999999865 6999999998773
No 155
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.44 E-value=1e-06 Score=63.81 Aligned_cols=102 Identities=17% Similarity=0.267 Sum_probs=75.2
Q ss_pred CCCeEEEEccCCCCccch-----HHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhH-HHHHHHHHhc---CCCC
Q 032072 17 QKPHFVLVHGISGGAWCW-----YKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYN-KPLMDFMSSL---TDNE 87 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~-----~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~ 87 (148)
-+.+++++|..-.....+ ..+...|.+.|..|+.+++++-..+.. ..+.+++. +.+.+.++.. ...+
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~----~~~~edYi~e~l~~aid~v~~itg~~ 181 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA----AKNLEDYILEGLSEAIDTVKDITGQK 181 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh----hccHHHHHHHHHHHHHHHHHHHhCcc
Confidence 457899999887654443 357788888999999999987554433 24555555 4444444333 3368
Q ss_pred cEEEEEeChhHHHHHHHHHhhchh-hceeeEecccc
Q 032072 88 KVILVGHSAGGLSITQASHKFGNK-IRLAVYLAATM 122 (148)
Q Consensus 88 ~i~lvG~S~Gg~~a~~~~~~~~~~-i~~~i~~~~~~ 122 (148)
+|.++|+|.||.++..++..++.+ |+.+.++.++.
T Consensus 182 ~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~ 217 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPV 217 (445)
T ss_pred ccceeeEecchHHHHHHHHhhhhcccccceeeecch
Confidence 999999999999999999988877 99998888765
No 156
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.42 E-value=5e-06 Score=61.70 Aligned_cols=108 Identities=18% Similarity=0.135 Sum_probs=66.1
Q ss_pred CCCeEEEEccCCCCccch--HHH-HHHHHhCCcEEEEEecCCCCCCCCCCC------CCcchhhhHHHHHHHHHhcC---
Q 032072 17 QKPHFVLVHGISGGAWCW--YKV-RCLMENSGYKVSCINLKGSGTDPSDAN------SIHSFDDYNKPLMDFMSSLT--- 84 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~--~~~-~~~l~~~~~~v~~~d~~g~g~s~~~~~------~~~~~~~~~~~~~~~~~~~~--- 84 (148)
.+|++|++-|=+.-...+ ..+ .+...+.+-.++++++|.+|.|.+... ..-+.++.++|+..+++.+.
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 456666664433221111 122 233334577899999999999975332 12466778888877776653
Q ss_pred ---CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccccC
Q 032072 85 ---DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLK 124 (148)
Q Consensus 85 ---~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~~ 124 (148)
+..+++++|-|+||.++..+-.++|+.|.+.+.-+++...
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 2458999999999999999999999999998888887743
No 157
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.41 E-value=5.1e-06 Score=62.06 Aligned_cols=120 Identities=13% Similarity=0.147 Sum_probs=74.5
Q ss_pred ceeeEEEeeCCC-CCCCCeEEEEccCCCCccchHHHHH-----------HHHh------CCcEEEEEecC-CCCCCCCCC
Q 032072 3 EEINMREIKKPA-EVQKPHFVLVHGISGGAWCWYKVRC-----------LMEN------SGYKVSCINLK-GSGTDPSDA 63 (148)
Q Consensus 3 ~~~~~~~~~~~~-~~~~~~vl~~hG~~~~~~~~~~~~~-----------~l~~------~~~~v~~~d~~-g~g~s~~~~ 63 (148)
..+.++.+.... +.+.|+|++++|..|.+..+-.+.+ .+.. ....++.+|.| |+|.|....
T Consensus 61 ~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~ 140 (462)
T PTZ00472 61 KHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADK 140 (462)
T ss_pred ceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCC
Confidence 456667665433 3467999999999876654422110 1110 23568889975 777665432
Q ss_pred C-CCcchhhhHHHHHHHHHhc----C--CCCcEEEEEeChhHHHHHHHHHhhc----------hhhceeeEecccc
Q 032072 64 N-SIHSFDDYNKPLMDFMSSL----T--DNEKVILVGHSAGGLSITQASHKFG----------NKIRLAVYLAATM 122 (148)
Q Consensus 64 ~-~~~~~~~~~~~~~~~~~~~----~--~~~~i~lvG~S~Gg~~a~~~~~~~~----------~~i~~~i~~~~~~ 122 (148)
. ...+.++.++++.++++.. + ...+++++|+|+||..+..++.+.- -.++++++-++..
T Consensus 141 ~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 141 ADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred CCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 2 1234456666666666543 2 2478999999999998877776431 1477877777654
No 158
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.41 E-value=1.4e-05 Score=57.65 Aligned_cols=104 Identities=14% Similarity=0.137 Sum_probs=68.5
Q ss_pred CCCCeEEEEccCCCC----ccchH---HHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCc
Q 032072 16 VQKPHFVLVHGISGG----AWCWY---KVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEK 88 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~----~~~~~---~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (148)
++.|+||++||.|-. +.+.. .+...+. ...+++.|+.-..........+.+..+..+....+++... .++
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G-~~n 196 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEG-NKN 196 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccC-CCe
Confidence 356999999998742 22222 2233333 4588888877543111222233666777777777776655 689
Q ss_pred EEEEEeChhHHHHHHHHHhhch-----hhceeeEecccc
Q 032072 89 VILVGHSAGGLSITQASHKFGN-----KIRLAVYLAATM 122 (148)
Q Consensus 89 i~lvG~S~Gg~~a~~~~~~~~~-----~i~~~i~~~~~~ 122 (148)
|+|+|-|.||.+++.+++...+ ..+++|+++|=.
T Consensus 197 I~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv 235 (374)
T PF10340_consen 197 IILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWV 235 (374)
T ss_pred EEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCc
Confidence 9999999999999988774321 367889988733
No 159
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.41 E-value=1.9e-07 Score=61.70 Aligned_cols=108 Identities=18% Similarity=0.189 Sum_probs=69.4
Q ss_pred CCCeEEEEccCCCCccchHH---HHHHHHhCCcEEEEEecCCCCCCCCCC--C----------CCcchhhhHH-------
Q 032072 17 QKPHFVLVHGISGGAWCWYK---VRCLMENSGYKVSCINLKGSGTDPSDA--N----------SIHSFDDYNK------- 74 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~---~~~~l~~~~~~v~~~d~~g~g~s~~~~--~----------~~~~~~~~~~------- 74 (148)
.-|++.++.|+.++.+.+.. +-+...+.|..|+.+|..-.|..-... . -..+.+.|++
T Consensus 43 ~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdY 122 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDY 122 (283)
T ss_pred cCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHH
Confidence 35899999999998887753 555666789999999854332111000 0 0011222222
Q ss_pred ---HHHHHHHhc---CCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccccC
Q 032072 75 ---PLMDFMSSL---TDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLK 124 (148)
Q Consensus 75 ---~~~~~~~~~---~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~~ 124 (148)
.+-+.+..- .+..++.+.||||||+-++..+.+++.+.+.+-..+|..++
T Consensus 123 v~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 123 VVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred HHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 222333211 12467999999999999999999999988887777776543
No 160
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.37 E-value=5.7e-06 Score=65.15 Aligned_cols=123 Identities=20% Similarity=0.141 Sum_probs=81.5
Q ss_pred ceeeEEEeeCCC---CCCCCeEEEEccCCCCccch----HHHHH-HHHhCCcEEEEEecCCCCCCCCC-------CCCCc
Q 032072 3 EEINMREIKKPA---EVQKPHFVLVHGISGGAWCW----YKVRC-LMENSGYKVSCINLKGSGTDPSD-------ANSIH 67 (148)
Q Consensus 3 ~~~~~~~~~~~~---~~~~~~vl~~hG~~~~~~~~----~~~~~-~l~~~~~~v~~~d~~g~g~s~~~-------~~~~~ 67 (148)
.+..+....++. .++-|.++..||..++.... ..+.. .+...|+.|+.+|.||-|..... .-...
T Consensus 508 ~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ 587 (755)
T KOG2100|consen 508 ITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDV 587 (755)
T ss_pred EEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCc
Confidence 344455444432 23447788888888633211 12233 34557999999999987644322 11335
Q ss_pred chhhhHHHHHHHHHhcC-CCCcEEEEEeChhHHHHHHHHHhhchhhcee-eEecccccCC
Q 032072 68 SFDDYNKPLMDFMSSLT-DNEKVILVGHSAGGLSITQASHKFGNKIRLA-VYLAATMLKL 125 (148)
Q Consensus 68 ~~~~~~~~~~~~~~~~~-~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~-i~~~~~~~~~ 125 (148)
..+|+...++.+++... +.+++.+.|+|+||+++..++...++.+.++ +.++|.....
T Consensus 588 ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~ 647 (755)
T KOG2100|consen 588 EVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL 647 (755)
T ss_pred chHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee
Confidence 66777777777776653 4679999999999999999999998555555 8888876443
No 161
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.37 E-value=5.9e-06 Score=57.94 Aligned_cols=103 Identities=17% Similarity=0.246 Sum_probs=69.0
Q ss_pred CCCeEEEEccCCCCc--cchHHHHHHHHh-CCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCC-CCcEEEE
Q 032072 17 QKPHFVLVHGISGGA--WCWYKVRCLMEN-SGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTD-NEKVILV 92 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~--~~~~~~~~~l~~-~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~lv 92 (148)
...|+|+.||+|.+- .....+.+.+.+ .|..+.++.. |.+ .......++.++++.+.+.+...+. ..-+.++
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~---~~~s~~~~~~~Qve~vce~l~~~~~l~~G~naI 99 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNG---VGDSWLMPLTQQAEIACEKVKQMKELSQGYNIV 99 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCC---ccccceeCHHHHHHHHHHHHhhchhhhCcEEEE
Confidence 456899999998643 345556665643 4566666553 222 1111224556666666555555321 2469999
Q ss_pred EeChhHHHHHHHHHhhch--hhceeeEeccccc
Q 032072 93 GHSAGGLSITQASHKFGN--KIRLAVYLAATML 123 (148)
Q Consensus 93 G~S~Gg~~a~~~~~~~~~--~i~~~i~~~~~~~ 123 (148)
|||+||.++..++.+.|+ .|+.+|.++++..
T Consensus 100 GfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 100 GRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 999999999999999986 5999999998874
No 162
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.36 E-value=7.6e-06 Score=61.90 Aligned_cols=107 Identities=23% Similarity=0.229 Sum_probs=61.5
Q ss_pred CCCeEEEEccCCC---Cc-cchHHHHHHHHhCCcEEEEEecC----CCCCCCC-CC-CCCcchhhhH---HHHHHHHHhc
Q 032072 17 QKPHFVLVHGISG---GA-WCWYKVRCLMENSGYKVSCINLK----GSGTDPS-DA-NSIHSFDDYN---KPLMDFMSSL 83 (148)
Q Consensus 17 ~~~~vl~~hG~~~---~~-~~~~~~~~~l~~~~~~v~~~d~~----g~g~s~~-~~-~~~~~~~~~~---~~~~~~~~~~ 83 (148)
+.|++|++||.+. +. .....-...+.+.+.-++.+++| |+-.+.. .. .....+.|+. +.+.+-|...
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 203 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAF 203 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGG
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhc
Confidence 3599999999763 33 12222233445578999999988 2221111 11 1334555554 4456666666
Q ss_pred C-CCCcEEEEEeChhHHHHHHHHHhh--chhhceeeEeccccc
Q 032072 84 T-DNEKVILVGHSAGGLSITQASHKF--GNKIRLAVYLAATML 123 (148)
Q Consensus 84 ~-~~~~i~lvG~S~Gg~~a~~~~~~~--~~~i~~~i~~~~~~~ 123 (148)
. +.++|.|.|+|.||..+...+... ...++++|+.++...
T Consensus 204 GGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 204 GGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred ccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 4 467999999999998776665542 246999999998554
No 163
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.33 E-value=3.5e-06 Score=61.64 Aligned_cols=82 Identities=21% Similarity=0.268 Sum_probs=55.7
Q ss_pred chHHHHHHHHhCCcEE----E-E-EecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC--CCCcEEEEEeChhHHHHHHH
Q 032072 33 CWYKVRCLMENSGYKV----S-C-INLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT--DNEKVILVGHSAGGLSITQA 104 (148)
Q Consensus 33 ~~~~~~~~l~~~~~~v----~-~-~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~lvG~S~Gg~~a~~~ 104 (148)
.|..+++.|.+.||.. . + +|+|-- . ...++....+.+.++... ...+++|+||||||.++..+
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~-----~----~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLS-----P----AERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhc-----h----hhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHH
Confidence 4677888998877652 2 2 566621 1 123344444444444431 16899999999999999999
Q ss_pred HHhhc------hhhceeeEeccccc
Q 032072 105 SHKFG------NKIRLAVYLAATML 123 (148)
Q Consensus 105 ~~~~~------~~i~~~i~~~~~~~ 123 (148)
+...+ +.|+++|.++++..
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCCC
Confidence 88763 35999999999874
No 164
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.32 E-value=6.7e-06 Score=64.89 Aligned_cols=86 Identities=15% Similarity=0.098 Sum_probs=61.0
Q ss_pred HHHHHHhCCcEEEEEecCCCCCCCCCCCCC-cchhhhHHHHHHHHHhcC----------------CCCcEEEEEeChhHH
Q 032072 37 VRCLMENSGYKVSCINLKGSGTDPSDANSI-HSFDDYNKPLMDFMSSLT----------------DNEKVILVGHSAGGL 99 (148)
Q Consensus 37 ~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~-~~~~~~~~~~~~~~~~~~----------------~~~~i~lvG~S~Gg~ 99 (148)
+.+.+.+.||.|+..|.||.+.|+...... ....+...++.+++.... ...+|.++|.|+||.
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~ 350 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGT 350 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHH
Confidence 456677789999999999999988754221 111122223333443210 146999999999999
Q ss_pred HHHHHHHhhchhhceeeEecccc
Q 032072 100 SITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 100 ~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+++.+|...|..++++|..++..
T Consensus 351 ~~~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 351 LPNAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred HHHHHHhhCCCcceEEEeeCCCC
Confidence 99999998888899999887654
No 165
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.30 E-value=1.6e-05 Score=54.48 Aligned_cols=101 Identities=18% Similarity=0.275 Sum_probs=71.0
Q ss_pred CeEEEEccCCCCccc--hHHHHHHHHh-CCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCC-CCcEEEEEe
Q 032072 19 PHFVLVHGISGGAWC--WYKVRCLMEN-SGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTD-NEKVILVGH 94 (148)
Q Consensus 19 ~~vl~~hG~~~~~~~--~~~~~~~l~~-~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~lvG~ 94 (148)
.++|+.||++..... +..+.+.+.+ .|..+++.+.- .|- .........++++.+.+.+...+. ..-+.++|+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig-~g~---~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~ 99 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIG-DGI---KDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGY 99 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEec-CCc---chhhhccHHHHHHHHHHHHhcchhccCceEEEEE
Confidence 689999999976554 6666666665 57778888843 331 111224556667666666665542 356999999
Q ss_pred ChhHHHHHHHHHhhch-hhceeeEeccccc
Q 032072 95 SAGGLSITQASHKFGN-KIRLAVYLAATML 123 (148)
Q Consensus 95 S~Gg~~a~~~~~~~~~-~i~~~i~~~~~~~ 123 (148)
|+||.++..+++.-++ .++..|.++++.-
T Consensus 100 SQGglv~Raliq~cd~ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDNPPVKNFISLGGPHA 129 (296)
T ss_pred ccccHHHHHHHHhCCCCCcceeEeccCCcC
Confidence 9999999999986543 6888898888763
No 166
>COG3150 Predicted esterase [General function prediction only]
Probab=98.23 E-value=1.6e-05 Score=50.83 Aligned_cols=88 Identities=20% Similarity=0.273 Sum_probs=61.5
Q ss_pred EEEEccCCCCccchHHH--HHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhH
Q 032072 21 FVLVHGISGGAWCWYKV--RCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGG 98 (148)
Q Consensus 21 vl~~hG~~~~~~~~~~~--~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg 98 (148)
||++||+.+++...... .+.+. .. .|-.+-+.+.+ ...+...++.++.++.+.. .+...++|.|+||
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~-~~-------~~~i~y~~p~l--~h~p~~a~~ele~~i~~~~-~~~p~ivGssLGG 70 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFID-ED-------VRDIEYSTPHL--PHDPQQALKELEKAVQELG-DESPLIVGSSLGG 70 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHh-cc-------ccceeeecCCC--CCCHHHHHHHHHHHHHHcC-CCCceEEeecchH
Confidence 79999999988766542 23333 22 22222233322 2678899999999999987 5669999999999
Q ss_pred HHHHHHHHhhchhhceeeEecccc
Q 032072 99 LSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 99 ~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+.+..++.++. ++. ++++|..
T Consensus 71 Y~At~l~~~~G--ira-v~~NPav 91 (191)
T COG3150 71 YYATWLGFLCG--IRA-VVFNPAV 91 (191)
T ss_pred HHHHHHHHHhC--Chh-hhcCCCc
Confidence 99999998875 343 5556544
No 167
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.06 E-value=3.6e-05 Score=51.58 Aligned_cols=102 Identities=21% Similarity=0.242 Sum_probs=73.0
Q ss_pred CCeEEEEccCCCCccc---hHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCC---CCcEEE
Q 032072 18 KPHFVLVHGISGGAWC---WYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTD---NEKVIL 91 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~~---~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~l 91 (148)
+..|||+-|++..-.. ...+.+.|.+.+|.++.+.++++-.. -...+.++.++++..+++.+.. .+.|++
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G----~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNG----YGTFSLKDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccc----cccccccccHHHHHHHHHHhhccCcccceEE
Confidence 3578889888864332 23567788888999999988753211 1225667778888888876643 348999
Q ss_pred EEeChhHHHHHHHHH--hhchhhceeeEeccccc
Q 032072 92 VGHSAGGLSITQASH--KFGNKIRLAVYLAATML 123 (148)
Q Consensus 92 vG~S~Gg~~a~~~~~--~~~~~i~~~i~~~~~~~ 123 (148)
+|||-|..-.+.|+. ..++.+...|+.+|..-
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred EecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 999999998888874 33567888888887653
No 168
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.02 E-value=2.6e-05 Score=49.72 Aligned_cols=39 Identities=18% Similarity=0.249 Sum_probs=31.8
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhhch----hhceeeEeccccc
Q 032072 85 DNEKVILVGHSAGGLSITQASHKFGN----KIRLAVYLAATML 123 (148)
Q Consensus 85 ~~~~i~lvG~S~Gg~~a~~~~~~~~~----~i~~~i~~~~~~~ 123 (148)
+..+++++|||+||.+|..++..... +...++.++++..
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 36899999999999999999887765 5667777777653
No 169
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.01 E-value=4.2e-05 Score=51.19 Aligned_cols=103 Identities=15% Similarity=0.138 Sum_probs=66.0
Q ss_pred CeEEEEccCCCCccc-hHHHHHHHHhCCcEEEEEecCCCCCCCCCCC--------CCcchhhhHHHH---HHHHHhcCCC
Q 032072 19 PHFVLVHGISGGAWC-WYKVRCLMENSGYKVSCINLKGSGTDPSDAN--------SIHSFDDYNKPL---MDFMSSLTDN 86 (148)
Q Consensus 19 ~~vl~~hG~~~~~~~-~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~--------~~~~~~~~~~~~---~~~~~~~~~~ 86 (148)
..||++.-..|.... -+..+..++..||.|++||+..-..-++... ...+.+...+++ .+.++.-.+.
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~ 119 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDS 119 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCc
Confidence 577777766665444 6778888988999999999764311111100 011222222333 3344433346
Q ss_pred CcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 87 EKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 87 ~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
.+|.++|+++||-++..+....+ .+.+++.+-|..
T Consensus 120 kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~ 154 (242)
T KOG3043|consen 120 KKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSF 154 (242)
T ss_pred ceeeEEEEeecceEEEEeeccch-hheeeeEecCCc
Confidence 79999999999999999988877 577777766554
No 170
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.98 E-value=0.00062 Score=44.50 Aligned_cols=114 Identities=20% Similarity=0.238 Sum_probs=72.6
Q ss_pred EEeeCCCCCCCCeEEEEccCCCCccchH----H----HHHH----HH--hCCcEEEEEecCCCCCCCC---CCCCCcchh
Q 032072 8 REIKKPAEVQKPHFVLVHGISGGAWCWY----K----VRCL----ME--NSGYKVSCINLKGSGTDPS---DANSIHSFD 70 (148)
Q Consensus 8 ~~~~~~~~~~~~~vl~~hG~~~~~~~~~----~----~~~~----l~--~~~~~v~~~d~~g~g~s~~---~~~~~~~~~ 70 (148)
.-++++.. ...+.++++|.+.+..... . +.+. +. ..+-.+-++-+.|+..... ........+
T Consensus 10 va~GD~d~-A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~ 88 (177)
T PF06259_consen 10 VAVGDPDT-ADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYAR 88 (177)
T ss_pred EEECCcCC-cCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHH
Confidence 34555544 4558889999987544321 1 1111 11 1233566666666543211 111223456
Q ss_pred hhHHHHHHHHHhcC----CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 71 DYNKPLMDFMSSLT----DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 71 ~~~~~~~~~~~~~~----~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+.+.++.+|++.+. +..++.++|||+|+.++-..+...+..+..++++++|-
T Consensus 89 ~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 89 AGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 66777888887774 34589999999999999999988677899999998864
No 171
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.91 E-value=0.00021 Score=52.06 Aligned_cols=107 Identities=14% Similarity=0.103 Sum_probs=75.6
Q ss_pred CCCeEEEEccCCCCccchHH---H-HHHHHhCCcEEEEEecCCCCCCCCCCC---------CCcchhhhHHHHHHHHHhc
Q 032072 17 QKPHFVLVHGISGGAWCWYK---V-RCLMENSGYKVSCINLKGSGTDPSDAN---------SIHSFDDYNKPLMDFMSSL 83 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~---~-~~~l~~~~~~v~~~d~~g~g~s~~~~~---------~~~~~~~~~~~~~~~~~~~ 83 (148)
.+.+|+|--|.-|+-+.+.. + .+...+.+--++.++.|.+|+|.+--. ..-+.++..++..+++..+
T Consensus 79 g~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~l 158 (492)
T KOG2183|consen 79 GEGPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFL 158 (492)
T ss_pred CCCceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHH
Confidence 33688888888776665543 2 223333456789999999998864221 2235566666666666665
Q ss_pred C-----CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 84 T-----DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 84 ~-----~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
+ ...+|+.+|-|+||+++.-+=.++|+-+.|.+.-++|..
T Consensus 159 K~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 159 KRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred hhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 3 246899999999999999999999999999887777664
No 172
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.91 E-value=0.0005 Score=47.41 Aligned_cols=42 Identities=19% Similarity=0.257 Sum_probs=37.3
Q ss_pred CCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccccCCCC
Q 032072 86 NEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKLGF 127 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~~~~~ 127 (148)
.++-.++|||+||.+++..+..+|+.+....+++|..+..+.
T Consensus 136 ~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~n~ 177 (264)
T COG2819 136 SERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWHNE 177 (264)
T ss_pred cccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhCCH
Confidence 467999999999999999999999999999999998875443
No 173
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.86 E-value=9.5e-05 Score=46.18 Aligned_cols=39 Identities=18% Similarity=0.387 Sum_probs=28.1
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhch
Q 032072 71 DYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGN 110 (148)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~ 110 (148)
+..+.+.+..+... ..++++.|||+||.+|..++....+
T Consensus 49 ~~~~~l~~~~~~~~-~~~i~itGHSLGGalA~l~a~~l~~ 87 (140)
T PF01764_consen 49 QILDALKELVEKYP-DYSIVITGHSLGGALASLAAADLAS 87 (140)
T ss_dssp HHHHHHHHHHHHST-TSEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccc-CccchhhccchHHHHHHHHHHhhhh
Confidence 33444555444444 5789999999999999999886543
No 174
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.83 E-value=0.00018 Score=52.14 Aligned_cols=88 Identities=15% Similarity=0.092 Sum_probs=62.4
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC---CCCcEEEEE
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT---DNEKVILVG 93 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~lvG 93 (148)
+...-||..|=|+-...-....+.|++.|+.|+.+|-.-+-++. .+.++.+.++..+++... ...++.|+|
T Consensus 259 sd~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~------rtPe~~a~Dl~r~i~~y~~~w~~~~~~liG 332 (456)
T COG3946 259 SDTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSE------RTPEQIAADLSRLIRFYARRWGAKRVLLIG 332 (456)
T ss_pred cceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhcc------CCHHHHHHHHHHHHHHHHHhhCcceEEEEe
Confidence 33456666776666666677899999999999999966555554 344566666665555543 268999999
Q ss_pred eChhHHHHHHHHHhhch
Q 032072 94 HSAGGLSITQASHKFGN 110 (148)
Q Consensus 94 ~S~Gg~~a~~~~~~~~~ 110 (148)
+|+|+-+.-...++.|.
T Consensus 333 ySfGADvlP~~~n~L~~ 349 (456)
T COG3946 333 YSFGADVLPFAYNRLPP 349 (456)
T ss_pred ecccchhhHHHHHhCCH
Confidence 99999877666665553
No 175
>COG0627 Predicted esterase [General function prediction only]
Probab=97.81 E-value=0.00012 Score=52.16 Aligned_cols=109 Identities=18% Similarity=0.294 Sum_probs=66.1
Q ss_pred CCCeEEEEccCCCCccchH---HHHHHHHhCCcEEEEEecC--------------CCCCCC------CCCCC-Ccchhhh
Q 032072 17 QKPHFVLVHGISGGAWCWY---KVRCLMENSGYKVSCINLK--------------GSGTDP------SDANS-IHSFDDY 72 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~---~~~~~l~~~~~~v~~~d~~--------------g~g~s~------~~~~~-~~~~~~~ 72 (148)
.-|+++++||..++...+. .+-+...+.++.++++|-. |.+.+- +.... .+.++..
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tf 132 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETF 132 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHH
Confidence 4578999999998764432 3445555677888877433 111110 00001 1233322
Q ss_pred H-HHHHHHHHh-cC-CC--CcEEEEEeChhHHHHHHHHHhhchhhceeeEecccccCC
Q 032072 73 N-KPLMDFMSS-LT-DN--EKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKL 125 (148)
Q Consensus 73 ~-~~~~~~~~~-~~-~~--~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~~~ 125 (148)
. +.+-..+.+ .. .. .+..++||||||.-|+.+|.++|++++.+..+++...+.
T Consensus 133 l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 133 LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 2 222222222 22 11 278999999999999999999999999998888876544
No 176
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.80 E-value=0.00047 Score=50.27 Aligned_cols=35 Identities=14% Similarity=0.028 Sum_probs=29.6
Q ss_pred CcEEEEEeChhHHHHHHHHHhhchhhceeeEeccc
Q 032072 87 EKVILVGHSAGGLSITQASHKFGNKIRLAVYLAAT 121 (148)
Q Consensus 87 ~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~ 121 (148)
-+++++|+|.||+++..++.-.|..+.+++=-++.
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~ 218 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSY 218 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCcc
Confidence 48999999999999999999999988875544443
No 177
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.78 E-value=0.00053 Score=51.42 Aligned_cols=81 Identities=16% Similarity=0.221 Sum_probs=60.8
Q ss_pred HHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhc----CCCCcEEEEEeChhHHHHHHHHHhhchh
Q 032072 36 KVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSL----TDNEKVILVGHSAGGLSITQASHKFGNK 111 (148)
Q Consensus 36 ~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~lvG~S~Gg~~a~~~~~~~~~~ 111 (148)
.+...|. .|+.|+.+.+.-. +....++.+......++++.+ ++..+..++|-|+||-.++.++..+|+.
T Consensus 92 evG~AL~-~GHPvYFV~F~p~------P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~ 164 (581)
T PF11339_consen 92 EVGVALR-AGHPVYFVGFFPE------PEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDL 164 (581)
T ss_pred HHHHHHH-cCCCeEEEEecCC------CCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCc
Confidence 4555666 7999998886632 112257777777666666554 3334999999999999999999999999
Q ss_pred hceeeEeccccc
Q 032072 112 IRLAVYLAATML 123 (148)
Q Consensus 112 i~~~i~~~~~~~ 123 (148)
+.-+++-++|..
T Consensus 165 ~gplvlaGaPls 176 (581)
T PF11339_consen 165 VGPLVLAGAPLS 176 (581)
T ss_pred cCceeecCCCcc
Confidence 999888887763
No 178
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.75 E-value=0.00034 Score=49.38 Aligned_cols=82 Identities=20% Similarity=0.116 Sum_probs=47.1
Q ss_pred HHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHh-----cCCCCcEEEEEeChhHHHHHHHHHhh----
Q 032072 38 RCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSS-----LTDNEKVILVGHSAGGLSITQASHKF---- 108 (148)
Q Consensus 38 ~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~lvG~S~Gg~~a~~~~~~~---- 108 (148)
+..+.+.||.|+++|+.|.|. +..............+++..+. +....++.+.|||.||.-++..+...
T Consensus 19 l~~~L~~GyaVv~pDY~Glg~--~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YA 96 (290)
T PF03583_consen 19 LAAWLARGYAVVAPDYEGLGT--PYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYA 96 (290)
T ss_pred HHHHHHCCCEEEecCCCCCCC--cccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhC
Confidence 344445899999999999876 2111112222222223322221 11246899999999999887766533
Q ss_pred ch-h--hceeeEeccc
Q 032072 109 GN-K--IRLAVYLAAT 121 (148)
Q Consensus 109 ~~-~--i~~~i~~~~~ 121 (148)
|+ . +.+.+..+++
T Consensus 97 peL~~~l~Gaa~gg~~ 112 (290)
T PF03583_consen 97 PELNRDLVGAAAGGPP 112 (290)
T ss_pred cccccceeEEeccCCc
Confidence 33 2 5565555544
No 179
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.71 E-value=0.00017 Score=54.90 Aligned_cols=89 Identities=18% Similarity=0.215 Sum_probs=54.4
Q ss_pred chHHHHHHHHhCCcEEEEEecCCCCCCCCCC-CCCcchhhhHHHHHHHHHhc---CCCCcEEEEEeChhHHHHHHHHHhh
Q 032072 33 CWYKVRCLMENSGYKVSCINLKGSGTDPSDA-NSIHSFDDYNKPLMDFMSSL---TDNEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 33 ~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
.|..+++.|.+.||. -.++.+...-.+.. ......+++...+...++.. ...++++|+|||||+.+++.++...
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv 234 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWV 234 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhc
Confidence 457888999988886 23333321111111 01122234444444444433 3358999999999999999987632
Q ss_pred ---------------chhhceeeEeccccc
Q 032072 109 ---------------GNKIRLAVYLAATML 123 (148)
Q Consensus 109 ---------------~~~i~~~i~~~~~~~ 123 (148)
.+.|+..|.++++..
T Consensus 235 ~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 235 EAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred cccccccCCcchHHHHHHHHHheecccccC
Confidence 135899999998773
No 180
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=97.66 E-value=0.00021 Score=47.67 Aligned_cols=65 Identities=12% Similarity=0.158 Sum_probs=45.1
Q ss_pred CCcEEEEEecCCCCCCCCC----CC----CCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhh
Q 032072 44 SGYKVSCINLKGSGTDPSD----AN----SIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 44 ~~~~v~~~d~~g~g~s~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
...+|++|-+|-....... .. ......|..+....+++.....++++|+|||+|+.+..+++.+.
T Consensus 44 ~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 44 GVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred cCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 3457888887754221111 00 11234566677788888887778999999999999999999865
No 181
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.63 E-value=0.00035 Score=47.42 Aligned_cols=53 Identities=19% Similarity=0.212 Sum_probs=38.0
Q ss_pred HHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhh----chhhceeeEecccccCCCC
Q 032072 73 NKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKF----GNKIRLAVYLAATMLKLGF 127 (148)
Q Consensus 73 ~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~----~~~i~~~i~~~~~~~~~~~ 127 (148)
++-+...++... .++++.|||.||.+|..++... .++|.++...++|.....+
T Consensus 72 ~~yl~~~~~~~~--~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~~~~ 128 (224)
T PF11187_consen 72 LAYLKKIAKKYP--GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFSEEF 128 (224)
T ss_pred HHHHHHHHHhCC--CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCChhh
Confidence 334444444444 4699999999999999998864 4578898988887644433
No 182
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.63 E-value=0.0004 Score=45.55 Aligned_cols=53 Identities=17% Similarity=0.320 Sum_probs=38.8
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHh------hchhhceeeEecccccC
Q 032072 71 DYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHK------FGNKIRLAVYLAATMLK 124 (148)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~------~~~~i~~~i~~~~~~~~ 124 (148)
+..+.+.+....-+ ..+++|+|+|+|+.++..++.. ..++|.++++++-|...
T Consensus 66 ~~~~~i~~~~~~CP-~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 66 NLVRLIEEYAARCP-NTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRG 124 (179)
T ss_dssp HHHHHHHHHHHHST-TSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTB
T ss_pred HHHHHHHHHHHhCC-CCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCccc
Confidence 33444444444444 6799999999999999999877 34689999999887654
No 183
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.60 E-value=0.00024 Score=47.88 Aligned_cols=51 Identities=20% Similarity=0.358 Sum_probs=38.9
Q ss_pred hHHHHHHHHHhcCC--CCcEEEEEeChhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 72 YNKPLMDFMSSLTD--NEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 72 ~~~~~~~~~~~~~~--~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
..+...+++++.+. .++|.++|.|.||-+|+.++..+| .|+.+|.++++..
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 34455556666542 479999999999999999999998 7999999988664
No 184
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.59 E-value=0.00078 Score=55.24 Aligned_cols=97 Identities=14% Similarity=0.185 Sum_probs=71.1
Q ss_pred CCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeC
Q 032072 16 VQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHS 95 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S 95 (148)
...|+++|+|..-+....+..++..|. .|.+|.--.......++++.++-..+.++.+.+..+..++|+|
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle----------~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GYS 2190 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLE----------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGYS 2190 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcC----------CcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeeccc
Confidence 356899999998887776666665553 2333322112223378899999999999999888999999999
Q ss_pred hhHHHHHHHHHhhch--hhceeeEecccc
Q 032072 96 AGGLSITQASHKFGN--KIRLAVYLAATM 122 (148)
Q Consensus 96 ~Gg~~a~~~~~~~~~--~i~~~i~~~~~~ 122 (148)
+|+.++..++....+ ....+|++++..
T Consensus 2191 yG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2191 YGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred hhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 999999999886643 355688887753
No 185
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.52 E-value=0.0019 Score=47.60 Aligned_cols=119 Identities=13% Similarity=0.161 Sum_probs=70.2
Q ss_pred ceeeEEEeeCCC-CCCCCeEEEEccCCCCccchHHHHH-------------------HHHhCCcEEEEEecC-CCCCCCC
Q 032072 3 EEINMREIKKPA-EVQKPHFVLVHGISGGAWCWYKVRC-------------------LMENSGYKVSCINLK-GSGTDPS 61 (148)
Q Consensus 3 ~~~~~~~~~~~~-~~~~~~vl~~hG~~~~~~~~~~~~~-------------------~l~~~~~~v~~~d~~-g~g~s~~ 61 (148)
.++.++.+.... .++.|+||.+.|..|.+..+-.+.+ ... ....++.+|.| |.|.|-.
T Consensus 24 ~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~-~~an~l~iD~PvGtGfS~~ 102 (415)
T PF00450_consen 24 AHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWN-KFANLLFIDQPVGTGFSYG 102 (415)
T ss_dssp EEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GG-GTSEEEEE--STTSTT-EE
T ss_pred cEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccc-cccceEEEeecCceEEeec
Confidence 466777665543 3567999999999887776533211 011 24578999955 7887754
Q ss_pred CCCC--CcchhhhHHHHHHHHHhc----C--CCCcEEEEEeChhHHHHHHHHHhh----------chhhceeeEecccc
Q 032072 62 DANS--IHSFDDYNKPLMDFMSSL----T--DNEKVILVGHSAGGLSITQASHKF----------GNKIRLAVYLAATM 122 (148)
Q Consensus 62 ~~~~--~~~~~~~~~~~~~~~~~~----~--~~~~i~lvG~S~Gg~~a~~~~~~~----------~~~i~~~i~~~~~~ 122 (148)
.... ..+.++.++++.++++.. + ...++++.|.|+||..+-.++... +-.++++++-++..
T Consensus 103 ~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 103 NDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp SSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-S
T ss_pred cccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccc
Confidence 3322 235666677766666554 2 245899999999998766665522 12477877777655
No 186
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.51 E-value=0.00035 Score=47.51 Aligned_cols=24 Identities=29% Similarity=0.469 Sum_probs=20.9
Q ss_pred CCcEEEEEeChhHHHHHHHHHhhc
Q 032072 86 NEKVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
..++++.|||+||.+|..++....
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHH
Confidence 578999999999999999888654
No 187
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.45 E-value=0.0014 Score=50.09 Aligned_cols=107 Identities=23% Similarity=0.208 Sum_probs=63.6
Q ss_pred CCeEEEEccCCC---Cccch--HHHHHHHHhCCcEEEEEecC----CCCCCC-CCCCCCcchhhhHH---HHHHHHHhcC
Q 032072 18 KPHFVLVHGISG---GAWCW--YKVRCLMENSGYKVSCINLK----GSGTDP-SDANSIHSFDDYNK---PLMDFMSSLT 84 (148)
Q Consensus 18 ~~~vl~~hG~~~---~~~~~--~~~~~~l~~~~~~v~~~d~~----g~g~s~-~~~~~~~~~~~~~~---~~~~~~~~~~ 84 (148)
-|+++++||.+- +...+ ......+.....-++.+.+| |+.... ..........|+.. .+.+.+....
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 699999999863 32222 11222233345667777776 221111 11123344445544 4555555554
Q ss_pred -CCCcEEEEEeChhHHHHHHHHH--hhchhhceeeEecccccC
Q 032072 85 -DNEKVILVGHSAGGLSITQASH--KFGNKIRLAVYLAATMLK 124 (148)
Q Consensus 85 -~~~~i~lvG~S~Gg~~a~~~~~--~~~~~i~~~i~~~~~~~~ 124 (148)
+..+|.++|||.||..+..+.. .....++++|..++....
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~~ 234 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNALS 234 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccccc
Confidence 5689999999999988776655 223568888888877643
No 188
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.42 E-value=0.0033 Score=46.97 Aligned_cols=108 Identities=19% Similarity=0.145 Sum_probs=80.5
Q ss_pred CCCCeEEEEccCCCCccchH-----HHHHHHHhCCcEEEEEecCCCCCCCCCCCC------CcchhhhHHHHHHHHHhcC
Q 032072 16 VQKPHFVLVHGISGGAWCWY-----KVRCLMENSGYKVSCINLKGSGTDPSDANS------IHSFDDYNKPLMDFMSSLT 84 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~~~-----~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~------~~~~~~~~~~~~~~~~~~~ 84 (148)
...|+.|+|-|=+.-...|. .+.....+.|-.|+..++|.+|.|.+.... .-+..+..+++.++++.+.
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 36778888877665444442 345555667889999999999987654321 1355677888888888773
Q ss_pred ------CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 85 ------DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 85 ------~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
+..+++..|-|+-|.++..+=.++|+.+.+.+.-+++..
T Consensus 164 ~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 164 AKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred hhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 224899999999999999999999999999888777764
No 189
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.41 E-value=0.0022 Score=43.05 Aligned_cols=105 Identities=13% Similarity=0.145 Sum_probs=64.3
Q ss_pred CCCeEEEEccCCCCccchHH----HHHHHHhCCcEEEEEecCCC----CCC--CC-------C----------------C
Q 032072 17 QKPHFVLVHGISGGAWCWYK----VRCLMENSGYKVSCINLKGS----GTD--PS-------D----------------A 63 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~----~~~~l~~~~~~v~~~d~~g~----g~s--~~-------~----------------~ 63 (148)
.++-|||+||+-.+...+.. +-..|.+ -+.++.+|-|-- +.+ .+ . .
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k-~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKK-LAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHh-hheEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 46789999999988887764 4444553 377787776620 000 00 0 0
Q ss_pred CCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhc--------hhhceeeEecccccC
Q 032072 64 NSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFG--------NKIRLAVYLAATMLK 124 (148)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~--------~~i~~~i~~~~~~~~ 124 (148)
......++-.+-+.+.+.+..+- =.++|+|+|+.++..++..-+ -.++-+|++++....
T Consensus 83 ~~~~~~eesl~yl~~~i~enGPF--DGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~ 149 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENGPF--DGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFP 149 (230)
T ss_pred ccccChHHHHHHHHHHHHHhCCC--ccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCC
Confidence 01123334455566666665432 357899999999988877211 136888888887654
No 190
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=97.24 E-value=0.0013 Score=48.11 Aligned_cols=106 Identities=10% Similarity=0.060 Sum_probs=77.7
Q ss_pred CCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCC--CcchhhhHHHHHHHHHhcCC--CCcEEE
Q 032072 16 VQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANS--IHSFDDYNKPLMDFMSSLTD--NEKVIL 91 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~i~l 91 (148)
..+|.|+..-|++........-...|. +-+-+.+++|.++.|.+.+.+ .-++.+.+.+.+++++.++. ..+.+-
T Consensus 61 ~drPtV~~T~GY~~~~~p~r~Ept~Ll--d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWIS 138 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSPRRSEPTQLL--DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWIS 138 (448)
T ss_pred CCCCeEEEecCcccccCccccchhHhh--ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCcee
Confidence 367889999999875443333233343 347789999999999876642 23667777776666555531 578999
Q ss_pred EEeChhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 92 VGHSAGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 92 vG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
.|-|-||+.++.+=.-+|+.+.+.|...++..
T Consensus 139 TG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 139 TGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred cCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 99999999999888888999999999887763
No 191
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.23 E-value=0.0009 Score=45.76 Aligned_cols=98 Identities=13% Similarity=0.048 Sum_probs=57.2
Q ss_pred CCeEEEEccCC--CCc-cchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC-------CCC
Q 032072 18 KPHFVLVHGIS--GGA-WCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT-------DNE 87 (148)
Q Consensus 18 ~~~vl~~hG~~--~~~-~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 87 (148)
+.+|-|+-|.. ..+ -.|+.+.+.|.+.||.|++.-+.- + -.+ ..-..+..+.....++.+. ..-
T Consensus 17 ~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t--fDH---~~~A~~~~~~f~~~~~~L~~~~~~~~~~l 90 (250)
T PF07082_consen 17 KGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T--FDH---QAIAREVWERFERCLRALQKRGGLDPAYL 90 (250)
T ss_pred CEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C--CcH---HHHHHHHHHHHHHHHHHHHHhcCCCcccC
Confidence 34566666653 223 346778999999999998877542 1 011 0122222233333332221 124
Q ss_pred cEEEEEeChhHHHHHHHHHhhchhhceeeEeccc
Q 032072 88 KVILVGHSAGGLSITQASHKFGNKIRLAVYLAAT 121 (148)
Q Consensus 88 ~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~ 121 (148)
+++-+|||+|+-+-+.+...++..-++-++++..
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~~r~gniliSFN 124 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDVERAGNILISFN 124 (250)
T ss_pred CeeeeecccchHHHHHHhhhccCcccceEEEecC
Confidence 7889999999988887776665444666666643
No 192
>PLN02162 triacylglycerol lipase
Probab=97.22 E-value=0.0011 Score=49.30 Aligned_cols=35 Identities=31% Similarity=0.319 Sum_probs=25.8
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHH
Q 032072 71 DYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASH 106 (148)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~ 106 (148)
+..+.+.+.+...+ ..++++.|||+||.+|..++.
T Consensus 263 ~I~~~L~~lL~k~p-~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNK-NLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCC-CceEEEEecChHHHHHHHHHH
Confidence 34445555555544 578999999999999998755
No 193
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.22 E-value=0.00057 Score=50.52 Aligned_cols=84 Identities=23% Similarity=0.298 Sum_probs=51.9
Q ss_pred chHHHHHHHHhCCcE----E--EEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHh---cCCCCcEEEEEeChhHHHHHH
Q 032072 33 CWYKVRCLMENSGYK----V--SCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSS---LTDNEKVILVGHSAGGLSITQ 103 (148)
Q Consensus 33 ~~~~~~~~l~~~~~~----v--~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~lvG~S~Gg~~a~~ 103 (148)
.|..+.+.|..-||. + ..+|+|-.-.. ....++....+...++. +.+.++++|++||||+.+...
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~------~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~ly 198 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRLSYHN------SEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLY 198 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhhccCC------hhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHH
Confidence 456677777765654 3 34566631111 12233334444433333 344689999999999999999
Q ss_pred HHHhhch--------hhceeeEecccc
Q 032072 104 ASHKFGN--------KIRLAVYLAATM 122 (148)
Q Consensus 104 ~~~~~~~--------~i~~~i~~~~~~ 122 (148)
+...++. .|++.+.++++.
T Consensus 199 Fl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 199 FLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred HHhcccccchhHHHHHHHHHHccCchh
Confidence 9887765 377777777655
No 194
>PLN00413 triacylglycerol lipase
Probab=97.22 E-value=0.0012 Score=49.09 Aligned_cols=51 Identities=18% Similarity=0.195 Sum_probs=35.5
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhh--------chhhceeeEecccc
Q 032072 71 DYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKF--------GNKIRLAVYLAATM 122 (148)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~--------~~~i~~~i~~~~~~ 122 (148)
+..+.+.++++..+ ..++++.|||+||.+|..++... ..++.++...++|-
T Consensus 269 ~i~~~Lk~ll~~~p-~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PR 327 (479)
T PLN00413 269 TILRHLKEIFDQNP-TSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPR 327 (479)
T ss_pred HHHHHHHHHHHHCC-CCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCC
Confidence 45566777776655 67899999999999999887521 12344566666554
No 195
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.13 E-value=0.0016 Score=42.12 Aligned_cols=102 Identities=10% Similarity=0.044 Sum_probs=58.6
Q ss_pred CCCeEEEEccCCCCccchHH------HHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHH---HH-HHHHHhcCCC
Q 032072 17 QKPHFVLVHGISGGAWCWYK------VRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNK---PL-MDFMSSLTDN 86 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~------~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~---~~-~~~~~~~~~~ 86 (148)
.+.+|++++-.++.-.+|.. +++.+.+-....++++-. .. +.-.....+..+.++ +. +..+++.. +
T Consensus 25 aG~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~gl--ds-ESf~a~h~~~adr~~rH~AyerYv~eEal-p 100 (227)
T COG4947 25 AGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLSGL--DS-ESFLATHKNAADRAERHRAYERYVIEEAL-P 100 (227)
T ss_pred CCCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEeccc--ch-HhHhhhcCCHHHHHHHHHHHHHHHHHhhc-C
Confidence 34566667766665555433 444454323345555422 11 110111122222222 22 23333333 3
Q ss_pred CcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 87 EKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 87 ~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
.+-++-|-||||..+..+..++|+.+.++|.+++..
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred CCccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 567788999999999999999999999999999865
No 196
>PLN02408 phospholipase A1
Probab=97.07 E-value=0.0018 Score=46.98 Aligned_cols=38 Identities=18% Similarity=0.283 Sum_probs=27.3
Q ss_pred hHHHHHHHHHhcCCC-CcEEEEEeChhHHHHHHHHHhhc
Q 032072 72 YNKPLMDFMSSLTDN-EKVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 72 ~~~~~~~~~~~~~~~-~~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
..+.+.++++...+. .+|++.|||+||.+|..++....
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~ 222 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIK 222 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHH
Confidence 345555666555432 36999999999999999887543
No 197
>PLN02454 triacylglycerol lipase
Probab=97.02 E-value=0.0025 Score=46.91 Aligned_cols=34 Identities=24% Similarity=0.423 Sum_probs=23.3
Q ss_pred HHHHHHHhcCCC-CcEEEEEeChhHHHHHHHHHhh
Q 032072 75 PLMDFMSSLTDN-EKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 75 ~~~~~~~~~~~~-~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
.+.++++..++. .+|++.|||+||.+|..++...
T Consensus 215 ~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 215 KIKELLERYKDEKLSIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred HHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHH
Confidence 344444444322 2499999999999999998644
No 198
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.99 E-value=0.0021 Score=46.33 Aligned_cols=39 Identities=26% Similarity=0.359 Sum_probs=33.2
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhhchh-----hceeeEeccccc
Q 032072 85 DNEKVILVGHSAGGLSITQASHKFGNK-----IRLAVYLAATML 123 (148)
Q Consensus 85 ~~~~i~lvG~S~Gg~~a~~~~~~~~~~-----i~~~i~~~~~~~ 123 (148)
..+++.|+|||+|+.+...++....++ |+.++++++|.+
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 456899999999999999998877664 888999998874
No 199
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.95 E-value=0.0065 Score=46.93 Aligned_cols=108 Identities=14% Similarity=0.211 Sum_probs=71.5
Q ss_pred CCCCCeEEEEccCCCCc--cchHHHHHHHHhCCcEEEEEecCCCCCCC-------CCCCCCcchhhhHHHHHHHHHhcC-
Q 032072 15 EVQKPHFVLVHGISGGA--WCWYKVRCLMENSGYKVSCINLKGSGTDP-------SDANSIHSFDDYNKPLMDFMSSLT- 84 (148)
Q Consensus 15 ~~~~~~vl~~hG~~~~~--~~~~~~~~~l~~~~~~v~~~d~~g~g~s~-------~~~~~~~~~~~~~~~~~~~~~~~~- 84 (148)
.++.|.++.--|.-+.. ..|....-.|.+.|+...+.-.||-|.=. .......++.|..+..+.++++-.
T Consensus 445 ~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~ 524 (682)
T COG1770 445 DGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYT 524 (682)
T ss_pred CCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcC
Confidence 44567777666554422 22332222345678766666667654211 111233567777776666665542
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 85 DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 85 ~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
..++++.+|-|.||+++...+...|+.++++|+-.|++
T Consensus 525 ~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFV 562 (682)
T COG1770 525 SPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFV 562 (682)
T ss_pred CccceEEeccCchhHHHHHHHhhChhhhhheeecCCcc
Confidence 35689999999999999999999999999999988876
No 200
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.94 E-value=0.0052 Score=43.18 Aligned_cols=40 Identities=18% Similarity=0.228 Sum_probs=35.3
Q ss_pred CCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccccCC
Q 032072 86 NEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATMLKL 125 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~~~~ 125 (148)
...-+|.|.|+||.+++..+.++|+.|..++..++..+..
T Consensus 176 a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~ 215 (299)
T COG2382 176 ADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWT 215 (299)
T ss_pred CCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccC
Confidence 4568899999999999999999999999999998877543
No 201
>PLN02571 triacylglycerol lipase
Probab=96.90 E-value=0.0021 Score=47.29 Aligned_cols=39 Identities=18% Similarity=0.257 Sum_probs=28.0
Q ss_pred hhhHHHHHHHHHhcCCC-CcEEEEEeChhHHHHHHHHHhh
Q 032072 70 DDYNKPLMDFMSSLTDN-EKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 70 ~~~~~~~~~~~~~~~~~-~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
++..+.+.++++...+. .+|++.|||+||.+|...|...
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDI 247 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHH
Confidence 34455566666655532 3799999999999999988753
No 202
>PLN02310 triacylglycerol lipase
Probab=96.78 E-value=0.0042 Score=45.62 Aligned_cols=38 Identities=13% Similarity=0.197 Sum_probs=26.5
Q ss_pred hhHHHHHHHHHhcC---CCCcEEEEEeChhHHHHHHHHHhh
Q 032072 71 DYNKPLMDFMSSLT---DNEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 71 ~~~~~~~~~~~~~~---~~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
+..+.+.++++... +..+|.+.|||+||.+|..++...
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl 230 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEA 230 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHH
Confidence 34445555555442 234799999999999999988643
No 203
>PLN02934 triacylglycerol lipase
Probab=96.73 E-value=0.005 Score=46.36 Aligned_cols=35 Identities=23% Similarity=0.336 Sum_probs=26.8
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHH
Q 032072 71 DYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASH 106 (148)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~ 106 (148)
+..+.+.++++..+ ..++++.|||+||.+|..++.
T Consensus 306 ~v~~~lk~ll~~~p-~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHK-NAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCC-CCeEEEeccccHHHHHHHHHH
Confidence 34555666666654 578999999999999999875
No 204
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=96.73 E-value=0.012 Score=39.65 Aligned_cols=81 Identities=15% Similarity=0.249 Sum_probs=54.8
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHHhCCcE-EEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeC
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYK-VSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHS 95 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~-v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S 95 (148)
++..|||+.|++++...+..+. +. .++. +++.|++.-.. +. .+...+.|.|||+|
T Consensus 10 ~~~LilfF~GWg~d~~~f~hL~--~~-~~~D~l~~yDYr~l~~---------d~------------~~~~y~~i~lvAWS 65 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPFSHLI--LP-ENYDVLICYDYRDLDF---------DF------------DLSGYREIYLVAWS 65 (213)
T ss_pred CCeEEEEEecCCCChHHhhhcc--CC-CCccEEEEecCccccc---------cc------------ccccCceEEEEEEe
Confidence 3579999999999988776543 12 3455 45677774321 00 12236799999999
Q ss_pred hhHHHHHHHHHhhchhhceeeEeccccc
Q 032072 96 AGGLSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 96 ~Gg~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
||-.+|-.+.... .++..+.++++..
T Consensus 66 mGVw~A~~~l~~~--~~~~aiAINGT~~ 91 (213)
T PF04301_consen 66 MGVWAANRVLQGI--PFKRAIAINGTPY 91 (213)
T ss_pred HHHHHHHHHhccC--CcceeEEEECCCC
Confidence 9999988876654 3677777776553
No 205
>PLN02802 triacylglycerol lipase
Probab=96.71 E-value=0.0049 Score=46.40 Aligned_cols=37 Identities=14% Similarity=0.206 Sum_probs=26.4
Q ss_pred hHHHHHHHHHhcCCC-CcEEEEEeChhHHHHHHHHHhh
Q 032072 72 YNKPLMDFMSSLTDN-EKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 72 ~~~~~~~~~~~~~~~-~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
..+.+.++++...+. .+|++.|||+||.+|..++...
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 344455555555422 3799999999999999888754
No 206
>PLN03037 lipase class 3 family protein; Provisional
Probab=96.66 E-value=0.0052 Score=46.37 Aligned_cols=38 Identities=13% Similarity=0.224 Sum_probs=26.9
Q ss_pred hhHHHHHHHHHhcC---CCCcEEEEEeChhHHHHHHHHHhh
Q 032072 71 DYNKPLMDFMSSLT---DNEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 71 ~~~~~~~~~~~~~~---~~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
+..+.+.++++... +..++.+.|||+||.+|...|...
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DI 339 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEA 339 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHH
Confidence 34455566665553 234799999999999999888643
No 207
>PLN02324 triacylglycerol lipase
Probab=96.65 E-value=0.0039 Score=45.91 Aligned_cols=37 Identities=14% Similarity=0.271 Sum_probs=26.2
Q ss_pred hHHHHHHHHHhcCCC-CcEEEEEeChhHHHHHHHHHhh
Q 032072 72 YNKPLMDFMSSLTDN-EKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 72 ~~~~~~~~~~~~~~~-~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
..+.+.++++..++. .+|.+.|||+||.+|...|...
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHH
Confidence 344455566555432 3799999999999999988643
No 208
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=96.64 E-value=0.0058 Score=47.06 Aligned_cols=107 Identities=21% Similarity=0.250 Sum_probs=68.0
Q ss_pred CCCCeEEEEccCCCCc--cchHHHHHHHHhCCcEEEEEecCCCCCCCC-------CCCCCcchhhhHHHHHHHHHhc-CC
Q 032072 16 VQKPHFVLVHGISGGA--WCWYKVRCLMENSGYKVSCINLKGSGTDPS-------DANSIHSFDDYNKPLMDFMSSL-TD 85 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~--~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~-------~~~~~~~~~~~~~~~~~~~~~~-~~ 85 (148)
+++|.+|..+|.-+-. ..|..--..|.+.|+.....+.||-|.-.. .......++|...-.+.+++.= -.
T Consensus 468 g~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~ 547 (712)
T KOG2237|consen 468 GSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQ 547 (712)
T ss_pred CCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCC
Confidence 4567776666554322 123222223445788888999998764321 1112234445444444444332 13
Q ss_pred CCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 86 NEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
.++..+.|.|.||.++..+..+.|+.+..+++-.|..
T Consensus 548 ~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 548 PSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred ccceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 5789999999999999999999999999888877765
No 209
>PLN02209 serine carboxypeptidase
Probab=96.46 E-value=0.055 Score=40.57 Aligned_cols=119 Identities=14% Similarity=0.112 Sum_probs=65.5
Q ss_pred eeeEEEeeCCC-CCCCCeEEEEccCCCCccchHHHHH----------------HHHh------CCcEEEEEecC-CCCCC
Q 032072 4 EINMREIKKPA-EVQKPHFVLVHGISGGAWCWYKVRC----------------LMEN------SGYKVSCINLK-GSGTD 59 (148)
Q Consensus 4 ~~~~~~~~~~~-~~~~~~vl~~hG~~~~~~~~~~~~~----------------~l~~------~~~~v~~~d~~-g~g~s 59 (148)
.+.++.+.... ..+.|+++.+-|..|.+..+-.+.+ .+.. ....++.+|.| |.|.|
T Consensus 53 ~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS 132 (437)
T PLN02209 53 QFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFS 132 (437)
T ss_pred EEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCcc
Confidence 45565554433 2356999999999876654422211 1111 23467888854 67766
Q ss_pred CCCCC-CCcchhhhHHHH----HHHHHhcCC--CCcEEEEEeChhHHHHHHHHHhhc----------hhhceeeEecccc
Q 032072 60 PSDAN-SIHSFDDYNKPL----MDFMSSLTD--NEKVILVGHSAGGLSITQASHKFG----------NKIRLAVYLAATM 122 (148)
Q Consensus 60 ~~~~~-~~~~~~~~~~~~----~~~~~~~~~--~~~i~lvG~S~Gg~~a~~~~~~~~----------~~i~~~i~~~~~~ 122 (148)
-.... ...+-++.++++ ..+++..+. ..++++.|.|+||..+-.++...- -.++++++.++..
T Consensus 133 y~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~t 212 (437)
T PLN02209 133 YSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPIT 212 (437)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCccc
Confidence 32211 111222233444 444444432 358999999999975555554221 1467877777644
No 210
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.46 E-value=0.0067 Score=44.28 Aligned_cols=88 Identities=22% Similarity=0.215 Sum_probs=46.1
Q ss_pred CCCeEEEEccCCC-CccchHHHHHHHHhC--CcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEE
Q 032072 17 QKPHFVLVHGISG-GAWCWYKVRCLMENS--GYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVG 93 (148)
Q Consensus 17 ~~~~vl~~hG~~~-~~~~~~~~~~~l~~~--~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG 93 (148)
....|++.||+.+ +-..|...+...... +..++.-...+.-..+.+- ...--+..++.+.+.+.... .+++.++|
T Consensus 79 ~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~G-v~~lG~Rla~~~~e~~~~~s-i~kISfvg 156 (405)
T KOG4372|consen 79 PKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDG-VDVLGERLAEEVKETLYDYS-IEKISFVG 156 (405)
T ss_pred CceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhcccc-ceeeecccHHHHhhhhhccc-cceeeeee
Confidence 4458999999988 445565555555432 2222222222221111100 00111233344444444443 58999999
Q ss_pred eChhHHHHHHHHH
Q 032072 94 HSAGGLSITQASH 106 (148)
Q Consensus 94 ~S~Gg~~a~~~~~ 106 (148)
||+||.++..+..
T Consensus 157 hSLGGLvar~AIg 169 (405)
T KOG4372|consen 157 HSLGGLVARYAIG 169 (405)
T ss_pred eecCCeeeeEEEE
Confidence 9999987765533
No 211
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=96.45 E-value=0.05 Score=37.10 Aligned_cols=79 Identities=14% Similarity=0.123 Sum_probs=49.5
Q ss_pred CcEEEEEecCCC-CCC--CCCCCCCcchhhhHHHHHHHHHhcC-CCCcEEEEEeChhHHHHHHHHHhhch------hhce
Q 032072 45 GYKVSCINLKGS-GTD--PSDANSIHSFDDYNKPLMDFMSSLT-DNEKVILVGHSAGGLSITQASHKFGN------KIRL 114 (148)
Q Consensus 45 ~~~v~~~d~~g~-g~s--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~lvG~S~Gg~~a~~~~~~~~~------~i~~ 114 (148)
|+.+..+++|.. +.- ........+..+-++.+.+.++... ..++++++|+|+|+.++...+.++.+ ..-.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 566667777652 111 1112233566677777777777632 45789999999999999988876633 1234
Q ss_pred eeEeccccc
Q 032072 115 AVYLAATML 123 (148)
Q Consensus 115 ~i~~~~~~~ 123 (148)
.++++-+..
T Consensus 82 fVl~gnP~r 90 (225)
T PF08237_consen 82 FVLIGNPRR 90 (225)
T ss_pred EEEecCCCC
Confidence 566665543
No 212
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=96.42 E-value=0.047 Score=37.34 Aligned_cols=99 Identities=12% Similarity=0.170 Sum_probs=58.8
Q ss_pred eEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCC--CcEEEEEeChh
Q 032072 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDN--EKVILVGHSAG 97 (148)
Q Consensus 20 ~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~lvG~S~G 97 (148)
.||++--+++.........+.-.+.|+.++.+-.+......+. ......++.+.+.+...... .++++-.+|.|
T Consensus 2 lvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~----~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnG 77 (240)
T PF05705_consen 2 LVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS----KRLAPAADKLLELLSDSQSASPPPILFHSFSNG 77 (240)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec----cchHHHHHHHHHHhhhhccCCCCCEEEEEEECc
Confidence 4444444444555555555555558999988876643221111 34455555566666555423 38999999998
Q ss_pred HHHHHHHHHh-h------c---hhhceeeEecccc
Q 032072 98 GLSITQASHK-F------G---NKIRLAVYLAATM 122 (148)
Q Consensus 98 g~~a~~~~~~-~------~---~~i~~~i~~~~~~ 122 (148)
|......... . . .+++++|+-++|.
T Consensus 78 G~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~ 112 (240)
T PF05705_consen 78 GSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPG 112 (240)
T ss_pred hHHHHHHHHHHHHhcccccccccccceeEEeCCCC
Confidence 8766665441 1 1 1388888877775
No 213
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=96.39 E-value=0.0075 Score=32.49 Aligned_cols=34 Identities=24% Similarity=0.417 Sum_probs=19.0
Q ss_pred CceeeEEEeeCCC-----CCCCCeEEEEccCCCCccchH
Q 032072 2 GEEINMREIKKPA-----EVQKPHFVLVHGISGGAWCWY 35 (148)
Q Consensus 2 g~~~~~~~~~~~~-----~~~~~~vl~~hG~~~~~~~~~ 35 (148)
|+-+.+.++..+. .+.+++|++.||+.+++..|.
T Consensus 22 GYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 22 GYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp SEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred CcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 5566666665543 346789999999999988773
No 214
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.35 E-value=0.043 Score=41.08 Aligned_cols=120 Identities=13% Similarity=0.091 Sum_probs=67.5
Q ss_pred ceeeEEEeeCCC-CCCCCeEEEEccCCCCccchHHHHH----------------HHHh------CCcEEEEEecC-CCCC
Q 032072 3 EEINMREIKKPA-EVQKPHFVLVHGISGGAWCWYKVRC----------------LMEN------SGYKVSCINLK-GSGT 58 (148)
Q Consensus 3 ~~~~~~~~~~~~-~~~~~~vl~~hG~~~~~~~~~~~~~----------------~l~~------~~~~v~~~d~~-g~g~ 58 (148)
..+.++.+.... ..+.|.|+.+-|..|.+..+-.+.+ .+.. ....++.+|.| |.|.
T Consensus 50 ~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGf 129 (433)
T PLN03016 50 VQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGF 129 (433)
T ss_pred eEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCc
Confidence 346666665433 3456999999998776553211110 1110 23568899954 7777
Q ss_pred CCCCCCCC--cc---hhhhHHHHHHHHHhcCC--CCcEEEEEeChhHHHHHHHHHhh----------chhhceeeEeccc
Q 032072 59 DPSDANSI--HS---FDDYNKPLMDFMSSLTD--NEKVILVGHSAGGLSITQASHKF----------GNKIRLAVYLAAT 121 (148)
Q Consensus 59 s~~~~~~~--~~---~~~~~~~~~~~~~~~~~--~~~i~lvG~S~Gg~~a~~~~~~~----------~~~i~~~i~~~~~ 121 (148)
|-...... .+ .++..+.+..+++..+. ..++++.|.|+||..+-.++... +-.++++++-++.
T Consensus 130 Sy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 209 (433)
T PLN03016 130 SYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPV 209 (433)
T ss_pred cCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCC
Confidence 64322111 11 12333444555544432 46899999999997665555532 1257787777764
Q ss_pred c
Q 032072 122 M 122 (148)
Q Consensus 122 ~ 122 (148)
.
T Consensus 210 t 210 (433)
T PLN03016 210 T 210 (433)
T ss_pred c
Confidence 4
No 215
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.35 E-value=0.067 Score=40.35 Aligned_cols=112 Identities=17% Similarity=0.218 Sum_probs=66.1
Q ss_pred CCCCCeEEEEccCCCCccchHHHHH----HHH---h-----------CCcEEEEEe-cCCCCCCCC-CCCCCcchhhhHH
Q 032072 15 EVQKPHFVLVHGISGGAWCWYKVRC----LME---N-----------SGYKVSCIN-LKGSGTDPS-DANSIHSFDDYNK 74 (148)
Q Consensus 15 ~~~~~~vl~~hG~~~~~~~~~~~~~----~l~---~-----------~~~~v~~~d-~~g~g~s~~-~~~~~~~~~~~~~ 74 (148)
+.++|+++.+-|..|.+..+-.+.+ .+. . ..-.++.+| .-|.|.|-. ......+.....+
T Consensus 98 p~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~ 177 (498)
T COG2939 98 PANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGK 177 (498)
T ss_pred CCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccch
Confidence 3468999999999887766544321 000 0 123578888 446666543 1112223333333
Q ss_pred HHHHH-------HHhcC-CCCcEEEEEeChhHHHHHHHHHhhch---hhceeeEecccccCCC
Q 032072 75 PLMDF-------MSSLT-DNEKVILVGHSAGGLSITQASHKFGN---KIRLAVYLAATMLKLG 126 (148)
Q Consensus 75 ~~~~~-------~~~~~-~~~~i~lvG~S~Gg~~a~~~~~~~~~---~i~~~i~~~~~~~~~~ 126 (148)
++..+ +.+.. ...+.+|+|.|+||+-+-.+|....+ ..++++++.+.....+
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 33322 22222 23589999999999988888776655 3777787777665555
No 216
>PLN02753 triacylglycerol lipase
Probab=96.24 E-value=0.0087 Score=45.28 Aligned_cols=36 Identities=17% Similarity=0.247 Sum_probs=25.7
Q ss_pred hHHHHHHHHHhcCC----CCcEEEEEeChhHHHHHHHHHh
Q 032072 72 YNKPLMDFMSSLTD----NEKVILVGHSAGGLSITQASHK 107 (148)
Q Consensus 72 ~~~~~~~~~~~~~~----~~~i~lvG~S~Gg~~a~~~~~~ 107 (148)
..+.+.++++...+ .-+|.+.|||+||.+|...|..
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 34445555554432 3589999999999999999863
No 217
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=96.18 E-value=0.072 Score=40.05 Aligned_cols=120 Identities=9% Similarity=0.072 Sum_probs=70.2
Q ss_pred CceeeEEEeeCCCC-CCCCeEEEEccCCCCccchHHHHHH------------HHh------CCcEEEEEecC-CCCCCC-
Q 032072 2 GEEINMREIKKPAE-VQKPHFVLVHGISGGAWCWYKVRCL------------MEN------SGYKVSCINLK-GSGTDP- 60 (148)
Q Consensus 2 g~~~~~~~~~~~~~-~~~~~vl~~hG~~~~~~~~~~~~~~------------l~~------~~~~v~~~d~~-g~g~s~- 60 (148)
+.++.|+.+..... ..+|.||.+-|..|.+..- .+... |.. +-.+++.+|.| |.|.|=
T Consensus 56 ~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs 134 (454)
T KOG1282|consen 56 GRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYS 134 (454)
T ss_pred CceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCcccc
Confidence 56888888877554 4579999999998755433 21111 111 12357888877 455442
Q ss_pred -CC----CCCCcchhhhHHHHHHHHHhcCC--CCcEEEEEeChhHHHHHHHHH----hhc------hhhceeeEecccc
Q 032072 61 -SD----ANSIHSFDDYNKPLMDFMSSLTD--NEKVILVGHSAGGLSITQASH----KFG------NKIRLAVYLAATM 122 (148)
Q Consensus 61 -~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~i~lvG~S~Gg~~a~~~~~----~~~------~~i~~~i~~~~~~ 122 (148)
.. ..+....++..+.+..++++.+. .+.+++.|.|++|...-.+|. .+. -.++|+++=++..
T Consensus 135 ~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 135 NTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLT 213 (454)
T ss_pred CCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCccc
Confidence 11 11222334445555666665542 478999999999966555554 221 2467766555544
No 218
>PLN02719 triacylglycerol lipase
Probab=95.98 E-value=0.014 Score=44.03 Aligned_cols=37 Identities=16% Similarity=0.245 Sum_probs=25.6
Q ss_pred hHHHHHHHHHhcCC----CCcEEEEEeChhHHHHHHHHHhh
Q 032072 72 YNKPLMDFMSSLTD----NEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 72 ~~~~~~~~~~~~~~----~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
..+.+.++++..++ ..+|.+.|||+||.+|..+|...
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHH
Confidence 34444555554432 24799999999999999988643
No 219
>PLN02761 lipase class 3 family protein
Probab=95.87 E-value=0.016 Score=43.82 Aligned_cols=36 Identities=11% Similarity=0.116 Sum_probs=24.9
Q ss_pred hHHHHHHHHHhcC-----CCCcEEEEEeChhHHHHHHHHHh
Q 032072 72 YNKPLMDFMSSLT-----DNEKVILVGHSAGGLSITQASHK 107 (148)
Q Consensus 72 ~~~~~~~~~~~~~-----~~~~i~lvG~S~Gg~~a~~~~~~ 107 (148)
..+.+..+++... +.-+|.+.|||+||.+|...+..
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 3444555555442 12479999999999999988863
No 220
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.50 E-value=0.022 Score=43.08 Aligned_cols=85 Identities=14% Similarity=0.203 Sum_probs=53.9
Q ss_pred HHHHHHhCCcEEEEEecCCCCCCCC--CCCCCcchh---hh--------HHHHHHHHHhcC--CCCcEEEEEeChhHHHH
Q 032072 37 VRCLMENSGYKVSCINLKGSGTDPS--DANSIHSFD---DY--------NKPLMDFMSSLT--DNEKVILVGHSAGGLSI 101 (148)
Q Consensus 37 ~~~~l~~~~~~v~~~d~~g~g~s~~--~~~~~~~~~---~~--------~~~~~~~~~~~~--~~~~i~lvG~S~Gg~~a 101 (148)
....+. .||.+..-| -||..+.. ......+.+ ++ ...-+++++... ..+.-+..|-|.||.-+
T Consensus 52 ~~~~~~-~G~A~~~TD-~Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqg 129 (474)
T PF07519_consen 52 MATALA-RGYATASTD-SGHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQG 129 (474)
T ss_pred cchhhh-cCeEEEEec-CCCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchH
Confidence 344555 799999988 34433321 111111221 11 111233333332 35789999999999999
Q ss_pred HHHHHhhchhhceeeEeccccc
Q 032072 102 TQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 102 ~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
+..++++|+.+++|+.-+|...
T Consensus 130 l~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 130 LMAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HHHHHhChhhcCeEEeCCchHH
Confidence 9999999999999888777664
No 221
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=95.33 E-value=0.027 Score=43.27 Aligned_cols=119 Identities=23% Similarity=0.240 Sum_probs=73.8
Q ss_pred CceeeEEEeeCC-CCCCCCeEEEEccCCCCc----cchHHHHHHHHhCCcEEEEEecCCCCCCCCC-------CCCCcch
Q 032072 2 GEEINMREIKKP-AEVQKPHFVLVHGISGGA----WCWYKVRCLMENSGYKVSCINLKGSGTDPSD-------ANSIHSF 69 (148)
Q Consensus 2 g~~~~~~~~~~~-~~~~~~~vl~~hG~~~~~----~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~-------~~~~~~~ 69 (148)
|.++.|..+... ...+.|++| ||+||.. ..|........+.|...+..+.||-|+-.+. ......+
T Consensus 404 GT~IPYFiv~K~~~~d~~pTll--~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vf 481 (648)
T COG1505 404 GTRIPYFIVRKGAKKDENPTLL--YAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVF 481 (648)
T ss_pred CccccEEEEecCCcCCCCceEE--EeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhh
Confidence 667777777522 122455554 4555421 1233333333347888889999997654321 0112344
Q ss_pred hhhHHHHHHHHHhc-CCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 70 DDYNKPLMDFMSSL-TDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 70 ~~~~~~~~~~~~~~-~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
+|......+++++= ..++++.+-|-|.||.++-.++.+.|+.+.++++-.|..
T Consensus 482 dDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPll 535 (648)
T COG1505 482 DDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLL 535 (648)
T ss_pred HHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchh
Confidence 55555555555442 235789999999999999988899999888877666654
No 222
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=95.25 E-value=0.038 Score=39.98 Aligned_cols=37 Identities=22% Similarity=0.336 Sum_probs=27.7
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhh
Q 032072 71 DYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
.+.+.+..+++..+ .-++.+.|||+||.+|..++...
T Consensus 156 ~~~~~~~~L~~~~~-~~~i~vTGHSLGgAlA~laa~~i 192 (336)
T KOG4569|consen 156 GLDAELRRLIELYP-NYSIWVTGHSLGGALASLAALDL 192 (336)
T ss_pred HHHHHHHHHHHhcC-CcEEEEecCChHHHHHHHHHHHH
Confidence 44445555555555 77999999999999999888743
No 223
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=95.24 E-value=0.19 Score=38.95 Aligned_cols=112 Identities=13% Similarity=0.072 Sum_probs=63.1
Q ss_pred EEEeeCCCCCCCCeEEEEccCCC----CccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHh
Q 032072 7 MREIKKPAEVQKPHFVLVHGISG----GAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSS 82 (148)
Q Consensus 7 ~~~~~~~~~~~~~~vl~~hG~~~----~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~ 82 (148)
++-+.+|.+.++-.|+=+||.|. +..+-..+-++..+.+..++.+|+.-.-+ .+.+...++..=+.-.+++.
T Consensus 385 ~~~wh~P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPE----aPFPRaleEv~fAYcW~inn 460 (880)
T KOG4388|consen 385 LELWHRPAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPE----APFPRALEEVFFAYCWAINN 460 (880)
T ss_pred cccCCCCCCCCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCC----CCCCcHHHHHHHHHHHHhcC
Confidence 33444555556778888999873 22221122333444678999999653221 11223333333333333322
Q ss_pred c---C-CCCcEEEEEeChhHHHHHHHHHhh----chhhceeeEecccc
Q 032072 83 L---T-DNEKVILVGHSAGGLSITQASHKF----GNKIRLAVYLAATM 122 (148)
Q Consensus 83 ~---~-~~~~i~lvG~S~Gg~~a~~~~~~~----~~~i~~~i~~~~~~ 122 (148)
. . -.++|+++|-|.||.+++..+.+. -+..+++++.-++.
T Consensus 461 ~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 461 CALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred HHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 2 1 148999999999998766655533 23467888776654
No 224
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.22 E-value=0.057 Score=41.74 Aligned_cols=100 Identities=14% Similarity=0.101 Sum_probs=63.7
Q ss_pred CCCeEEEEccCCC---CccchHHHHHHHHhCCcE--EEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhc-------C
Q 032072 17 QKPHFVLVHGISG---GAWCWYKVRCLMENSGYK--VSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSL-------T 84 (148)
Q Consensus 17 ~~~~vl~~hG~~~---~~~~~~~~~~~l~~~~~~--v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~-------~ 84 (148)
..|.++++||... ..+.+..|.+.|.-.+.. +-++|++. .....++...++.+..+.+.. .
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n-------~igG~nI~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNN-------PIGGANIKHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccC-------CCCCcchHHHHHHHHHHhhhhhhhhhccC
Confidence 3578999999872 333444666666644433 34445442 112256667777766666532 1
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhhc-hhhceeeEeccccc
Q 032072 85 DNEKVILVGHSAGGLSITQASHKFG-NKIRLAVYLAATML 123 (148)
Q Consensus 85 ~~~~i~lvG~S~Gg~~a~~~~~~~~-~~i~~~i~~~~~~~ 123 (148)
+..+|+|+|+|||+.++.+..-... ..|.++|.++-+..
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~ 287 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLD 287 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCceEEEEEEeccccc
Confidence 3578999999999988888766432 34888888876654
No 225
>PLN02847 triacylglycerol lipase
Probab=95.21 E-value=0.046 Score=42.17 Aligned_cols=23 Identities=30% Similarity=0.418 Sum_probs=19.5
Q ss_pred CCcEEEEEeChhHHHHHHHHHhh
Q 032072 86 NEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
.-+++++|||+||.+|..++...
T Consensus 250 dYkLVITGHSLGGGVAALLAilL 272 (633)
T PLN02847 250 DFKIKIVGHSLGGGTAALLTYIL 272 (633)
T ss_pred CCeEEEeccChHHHHHHHHHHHH
Confidence 46899999999999998887643
No 226
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.15 E-value=0.047 Score=41.31 Aligned_cols=44 Identities=23% Similarity=0.263 Sum_probs=34.7
Q ss_pred HhcCCCCcEEEEEeChhHHHHHHHHHhhch-----hhceeeEecccccC
Q 032072 81 SSLTDNEKVILVGHSAGGLSITQASHKFGN-----KIRLAVYLAATMLK 124 (148)
Q Consensus 81 ~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~-----~i~~~i~~~~~~~~ 124 (148)
....+.++|.+||+|+|+.+...++.+..+ -|..++++++|.+.
T Consensus 441 ~r~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 441 KRSQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred HhccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 333457899999999999999988775433 58899999998753
No 227
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.82 E-value=0.28 Score=35.27 Aligned_cols=76 Identities=13% Similarity=0.173 Sum_probs=45.4
Q ss_pred EEEEEecC-CCCCCCCCCCCC-----cchhhhHHHHHHHHHhcCC--CCcEEEEEeChhHHHHHHHHHhhc---------
Q 032072 47 KVSCINLK-GSGTDPSDANSI-----HSFDDYNKPLMDFMSSLTD--NEKVILVGHSAGGLSITQASHKFG--------- 109 (148)
Q Consensus 47 ~v~~~d~~-g~g~s~~~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~i~lvG~S~Gg~~a~~~~~~~~--------- 109 (148)
+++.+|.| |.|.|-...... ...++..+.+..+++..+. ..++++.|.|+||...-.++...-
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 57889988 677664322111 1223444445555555442 478999999999986666655321
Q ss_pred -hhhceeeEecccc
Q 032072 110 -NKIRLAVYLAATM 122 (148)
Q Consensus 110 -~~i~~~i~~~~~~ 122 (148)
-.++++++-++..
T Consensus 83 ~inLkGi~IGNg~t 96 (319)
T PLN02213 83 PINLQGYMLGNPVT 96 (319)
T ss_pred ceeeeEEEeCCCCC
Confidence 1467766666544
No 228
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.72 E-value=0.11 Score=40.14 Aligned_cols=52 Identities=19% Similarity=0.353 Sum_probs=35.0
Q ss_pred hhHHHHHHHHHhc-----CCCCcEEEEEeChhHHHHHHHHHhh-----c------hhhceeeEecccc
Q 032072 71 DYNKPLMDFMSSL-----TDNEKVILVGHSAGGLSITQASHKF-----G------NKIRLAVYLAATM 122 (148)
Q Consensus 71 ~~~~~~~~~~~~~-----~~~~~i~lvG~S~Gg~~a~~~~~~~-----~------~~i~~~i~~~~~~ 122 (148)
..+.+..++++++ .+.++|+.+||||||.++-.++... | ...+|+|+++.|.
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 3344444444444 2367899999999998887775532 2 3578888888776
No 229
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=93.83 E-value=0.35 Score=36.62 Aligned_cols=108 Identities=16% Similarity=0.086 Sum_probs=64.3
Q ss_pred EEeeCCCCCCCCeEEEEccCCCCccchHHHHHHHHhCCcE-EEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC-C
Q 032072 8 REIKKPAEVQKPHFVLVHGISGGAWCWYKVRCLMENSGYK-VSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT-D 85 (148)
Q Consensus 8 ~~~~~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~-v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~ 85 (148)
..+.+|..-+.|..|.+.|+-. .+.+..+ -.+.+.|.. .+.-|.|-.|.+--.- ...--+...+.+.+.++.|. .
T Consensus 279 ~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy-~MMk~Lg~PfLL~~DpRleGGaFYlG-s~eyE~~I~~~I~~~L~~LgF~ 355 (511)
T TIGR03712 279 IYYFNPGDFKPPLNVYFSGYRP-AEGFEGY-FMMKRLGAPFLLIGDPRLEGGAFYLG-SDEYEQGIINVIQEKLDYLGFD 355 (511)
T ss_pred EEecCCcCCCCCeEEeeccCcc-cCcchhH-HHHHhcCCCeEEeeccccccceeeeC-cHHHHHHHHHHHHHHHHHhCCC
Confidence 3444666667788889988765 3333222 234444544 5566877655432111 10112344555666777764 3
Q ss_pred CCcEEEEEeChhHHHHHHHHHhhchhhceeeEecc
Q 032072 86 NEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAA 120 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~ 120 (148)
...++|-|-|||..-|+.|++... .+++|+--|
T Consensus 356 ~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKP 388 (511)
T TIGR03712 356 HDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKP 388 (511)
T ss_pred HHHeeeccccccchhhhhhcccCC--CceEEEcCc
Confidence 568999999999999999988663 344444333
No 230
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=93.82 E-value=1.4 Score=31.02 Aligned_cols=90 Identities=11% Similarity=0.130 Sum_probs=51.7
Q ss_pred CeEEEEccCCCCccc------hHHHHHHH-HhCCcEEEEEecCCCCCC--------CCCC------CCCcchhhh-HHHH
Q 032072 19 PHFVLVHGISGGAWC------WYKVRCLM-ENSGYKVSCINLKGSGTD--------PSDA------NSIHSFDDY-NKPL 76 (148)
Q Consensus 19 ~~vl~~hG~~~~~~~------~~~~~~~l-~~~~~~v~~~d~~g~g~s--------~~~~------~~~~~~~~~-~~~~ 76 (148)
..|||+=|.+.+... ...+.+.+ ...+-....+-.+|.|.. .... .....+++. .+..
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 467777777653322 23455555 222334555566777761 1100 011233333 3334
Q ss_pred HHHHHhcCCCCcEEEEEeChhHHHHHHHHHhh
Q 032072 77 MDFMSSLTDNEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 77 ~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
..+.+...+.++|.++|+|=|+..+..++...
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 44446666678999999999999999998654
No 231
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=93.79 E-value=0.11 Score=36.69 Aligned_cols=36 Identities=22% Similarity=0.449 Sum_probs=27.2
Q ss_pred HHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhc
Q 032072 74 KPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 74 ~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
-++...++++.+..++.+.|||+||.+|..+..++.
T Consensus 263 ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 263 LDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 344445555555789999999999999998877664
No 232
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=93.79 E-value=0.11 Score=36.69 Aligned_cols=36 Identities=22% Similarity=0.449 Sum_probs=27.2
Q ss_pred HHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhc
Q 032072 74 KPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 74 ~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
-++...++++.+..++.+.|||+||.+|..+..++.
T Consensus 263 ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 263 LDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 344445555555789999999999999998877664
No 233
>PRK12467 peptide synthase; Provisional
Probab=93.58 E-value=1.5 Score=41.89 Aligned_cols=98 Identities=14% Similarity=0.129 Sum_probs=68.3
Q ss_pred CeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhH
Q 032072 19 PHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGG 98 (148)
Q Consensus 19 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg 98 (148)
+.+++.|...++...+..+...+. .+..++.+..++.-.... ...++.+.+....+.+....+..+..+.|+|+||
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~-~~~~~~~l~~~~~~~d~~---~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~ 3768 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILE-GDRHVLGLTCRHLLDDGW---QDTSLQAMAVQYADYILWQQAKGPYGLLGWSLGG 3768 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhC-CCCcEEEEeccccccccC---CccchHHHHHHHHHHHHHhccCCCeeeeeeecch
Confidence 569999998887777777777775 456777777665422111 1245667777777788777767789999999999
Q ss_pred HHHHHHHHhh---chhhceeeEecc
Q 032072 99 LSITQASHKF---GNKIRLAVYLAA 120 (148)
Q Consensus 99 ~~a~~~~~~~---~~~i~~~i~~~~ 120 (148)
.++..++... .+.+..+.+++.
T Consensus 3769 ~~a~~~~~~l~~~g~~~~~~~~~~~ 3793 (3956)
T PRK12467 3769 TLARLVAELLEREGESEAFLGLFDN 3793 (3956)
T ss_pred HHHHHHHHHHHHcCCceeEEEEEec
Confidence 9999887744 334555555543
No 234
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.30 E-value=0.31 Score=34.15 Aligned_cols=83 Identities=16% Similarity=0.177 Sum_probs=50.1
Q ss_pred HHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhh-------HHHHHHHHHhc-----CCCCcEEEEEeChhHHHHHHHH
Q 032072 38 RCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDY-------NKPLMDFMSSL-----TDNEKVILVGHSAGGLSITQAS 105 (148)
Q Consensus 38 ~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~-------~~~~~~~~~~~-----~~~~~i~lvG~S~Gg~~a~~~~ 105 (148)
...+...+...+.++-|.+|...+........+.. +..+.++.+.. ....+..++|.||||.++-...
T Consensus 134 ~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vg 213 (371)
T KOG1551|consen 134 SKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVG 213 (371)
T ss_pred cCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhc
Confidence 34444467788888888888765443211111111 11122222222 2357999999999999999999
Q ss_pred HhhchhhceeeEecc
Q 032072 106 HKFGNKIRLAVYLAA 120 (148)
Q Consensus 106 ~~~~~~i~~~i~~~~ 120 (148)
..++..|.-+=++++
T Consensus 214 S~~q~Pva~~p~l~~ 228 (371)
T KOG1551|consen 214 SLHQKPVATAPCLNS 228 (371)
T ss_pred ccCCCCccccccccc
Confidence 988876655444444
No 235
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.84 E-value=1.8 Score=31.61 Aligned_cols=104 Identities=18% Similarity=0.139 Sum_probs=58.6
Q ss_pred CeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC-CCCcEEEEEeChh
Q 032072 19 PHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT-DNEKVILVGHSAG 97 (148)
Q Consensus 19 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~lvG~S~G 97 (148)
++|+++.+.+..............+.|+.++-+-.|...................+.+.++++... +..++++--+|+|
T Consensus 40 ~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~FS~n 119 (350)
T KOG2521|consen 40 PIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVFSGN 119 (350)
T ss_pred cEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEEecCC
Confidence 555555554544444445555566678888777666543222111112344455566666666654 4678888899999
Q ss_pred HHHHHHHH---H-hh-c---hhhceeeEecccc
Q 032072 98 GLSITQAS---H-KF-G---NKIRLAVYLAATM 122 (148)
Q Consensus 98 g~~a~~~~---~-~~-~---~~i~~~i~~~~~~ 122 (148)
|...+... . ++ | +...+++..+.+.
T Consensus 120 g~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~ 152 (350)
T KOG2521|consen 120 GVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPA 152 (350)
T ss_pred ceeehHHHHHHHhhcCchhHhhcCCceEecccc
Confidence 97555443 1 22 2 2455566666554
No 236
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=92.49 E-value=1 Score=32.60 Aligned_cols=95 Identities=11% Similarity=0.191 Sum_probs=60.2
Q ss_pred CCCCeEEEEccCCCCc-cchHHHH--------------HHHHhCCcEEEEEecC-CCCCCC--CCCCCCcchhhhHHHHH
Q 032072 16 VQKPHFVLVHGISGGA-WCWYKVR--------------CLMENSGYKVSCINLK-GSGTDP--SDANSIHSFDDYNKPLM 77 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~-~~~~~~~--------------~~l~~~~~~v~~~d~~-g~g~s~--~~~~~~~~~~~~~~~~~ 77 (148)
..+|..+.+.|..+.+ ..+-.+. ..|. ...++.+|.| |.|.|- .......+.++.+.++.
T Consensus 29 s~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk--~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~ 106 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLK--DADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLV 106 (414)
T ss_pred cCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhh--hccEEEecCCCcCceeeecCcccccccHHHHHHHHH
Confidence 4568889999886533 3332221 2232 3467788876 444442 11112246677788888
Q ss_pred HHHHhcC------CCCcEEEEEeChhHHHHHHHHHhhchhh
Q 032072 78 DFMSSLT------DNEKVILVGHSAGGLSITQASHKFGNKI 112 (148)
Q Consensus 78 ~~~~~~~------~~~~i~lvG~S~Gg~~a~~~~~~~~~~i 112 (148)
++++.+. ...+++++..|+||-++..++...-..|
T Consensus 107 ~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aI 147 (414)
T KOG1283|consen 107 ELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAI 147 (414)
T ss_pred HHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHH
Confidence 7777762 2468999999999999999988665433
No 237
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=92.15 E-value=2.3 Score=28.11 Aligned_cols=74 Identities=19% Similarity=0.213 Sum_probs=44.3
Q ss_pred CCCCeEEEEccCCCCccch--HHHHHHHHhCCcEEEEEecCC--CCCCCCCCCCCcchhhhH---HHHHHHHHhcCCCCc
Q 032072 16 VQKPHFVLVHGISGGAWCW--YKVRCLMENSGYKVSCINLKG--SGTDPSDANSIHSFDDYN---KPLMDFMSSLTDNEK 88 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~~--~~~~~~l~~~~~~v~~~d~~g--~g~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 88 (148)
+.++.+|.+-|+.++...- ..+.+.|.+.|+.++..|=.. +|.+... .++.++-. ..+.+..+.+.+..-
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~dL---gFs~edR~eniRRvaevAkll~daG~ 96 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRDL---GFSREDRIENIRRVAEVAKLLADAGL 96 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCCC---CCChHHHHHHHHHHHHHHHHHHHCCe
Confidence 4567999999999876543 356778888999999998432 3333222 13333333 334444444443444
Q ss_pred EEEE
Q 032072 89 VILV 92 (148)
Q Consensus 89 i~lv 92 (148)
++++
T Consensus 97 iviv 100 (197)
T COG0529 97 IVIV 100 (197)
T ss_pred EEEE
Confidence 5554
No 238
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=91.75 E-value=3 Score=29.95 Aligned_cols=104 Identities=10% Similarity=0.004 Sum_probs=68.8
Q ss_pred CCCeEEEEccCCCCc-cchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeC
Q 032072 17 QKPHFVLVHGISGGA-WCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHS 95 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~-~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S 95 (148)
..|.|+++-.+.|.. ...+.-.+.|. ....|++.|+-....- +.....++.+++...+.+++..+.+ .+.+++.|
T Consensus 102 pdPkvLivapmsGH~aTLLR~TV~alL-p~~~vyitDW~dAr~V-p~~~G~FdldDYIdyvie~~~~~Gp--~~hv~aVC 177 (415)
T COG4553 102 PDPKVLIVAPMSGHYATLLRGTVEALL-PYHDVYITDWVDARMV-PLEAGHFDLDDYIDYVIEMINFLGP--DAHVMAVC 177 (415)
T ss_pred CCCeEEEEecccccHHHHHHHHHHHhc-cccceeEeecccccee-ecccCCccHHHHHHHHHHHHHHhCC--CCcEEEEe
Confidence 346777777766643 34455566666 5678999998653221 1223458899999999999999973 36666767
Q ss_pred hhH-----HHHHHHHHhhchhhceeeEecccccC
Q 032072 96 AGG-----LSITQASHKFGNKIRLAVYLAATMLK 124 (148)
Q Consensus 96 ~Gg-----~~a~~~~~~~~~~i~~~i~~~~~~~~ 124 (148)
+=+ .+++..+...|.......++++++-.
T Consensus 178 QP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 178 QPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred cCCchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 664 34444444556678888999988743
No 239
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=90.95 E-value=2.1 Score=25.30 Aligned_cols=81 Identities=15% Similarity=0.225 Sum_probs=47.3
Q ss_pred HHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhH--HHHHHHHHhhchhhc
Q 032072 36 KVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGG--LSITQASHKFGNKIR 113 (148)
Q Consensus 36 ~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg--~~a~~~~~~~~~~i~ 113 (148)
.+.+.+...++..=.+.++..|.+..........+.=...+.++++..+ ..++++||=|--. -+-..++.++|++|.
T Consensus 15 ~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP-~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ 93 (100)
T PF09949_consen 15 FLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFP-ERKFILIGDSGQHDPEIYAEIARRFPGRIL 93 (100)
T ss_pred HHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCC-CCcEEEEeeCCCcCHHHHHHHHHHCCCCEE
Confidence 3455565556654445555554332221111111233445667777766 7899999988664 444556779999998
Q ss_pred eeeE
Q 032072 114 LAVY 117 (148)
Q Consensus 114 ~~i~ 117 (148)
++.+
T Consensus 94 ai~I 97 (100)
T PF09949_consen 94 AIYI 97 (100)
T ss_pred EEEE
Confidence 8654
No 240
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=90.23 E-value=0.31 Score=29.48 Aligned_cols=23 Identities=26% Similarity=0.395 Sum_probs=13.3
Q ss_pred CCCCCeEEEEccCCCCccchHHH
Q 032072 15 EVQKPHFVLVHGISGGAWCWYKV 37 (148)
Q Consensus 15 ~~~~~~vl~~hG~~~~~~~~~~~ 37 (148)
.++..+||++||+.|+-..|..+
T Consensus 89 ~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 89 RPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp -TT-EEEEEE--SS--GGGGHHH
T ss_pred CCCCeEEEEECCCCccHHhHHhh
Confidence 34557999999999998877654
No 241
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=89.53 E-value=6.5 Score=28.65 Aligned_cols=91 Identities=13% Similarity=0.093 Sum_probs=55.0
Q ss_pred CCCeEEEEccCCCC-----ccchHHHHHHHHh-CCcEEEEEecCCCCCCCCCCC-----------C----Ccch-hhhHH
Q 032072 17 QKPHFVLVHGISGG-----AWCWYKVRCLMEN-SGYKVSCINLKGSGTDPSDAN-----------S----IHSF-DDYNK 74 (148)
Q Consensus 17 ~~~~vl~~hG~~~~-----~~~~~~~~~~l~~-~~~~v~~~d~~g~g~s~~~~~-----------~----~~~~-~~~~~ 74 (148)
.+..|+|+-|.... ......++..|.+ .+-.++++-.+|.|.-.-+.. . .... +...+
T Consensus 30 ~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~ 109 (423)
T COG3673 30 MKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIRE 109 (423)
T ss_pred cceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHH
Confidence 34578888876431 1333446667765 566777777788876521110 0 0111 12223
Q ss_pred HHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHh
Q 032072 75 PLMDFMSSLTDNEKVILVGHSAGGLSITQASHK 107 (148)
Q Consensus 75 ~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~ 107 (148)
+.+-++....+.++|++.|+|-|++.+..+|..
T Consensus 110 AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 110 AYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 334445555678999999999999998888763
No 242
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=89.52 E-value=1.9 Score=26.68 Aligned_cols=31 Identities=23% Similarity=0.349 Sum_probs=22.7
Q ss_pred CCCCCeEEEEccCCCCccchHH--HHHHHHhCC
Q 032072 15 EVQKPHFVLVHGISGGAWCWYK--VRCLMENSG 45 (148)
Q Consensus 15 ~~~~~~vl~~hG~~~~~~~~~~--~~~~l~~~~ 45 (148)
..++|.|+-+||..|+...+.. +++.|-..|
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSG 81 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcc
Confidence 3478999999999998887753 455655444
No 243
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=88.89 E-value=1.6 Score=28.39 Aligned_cols=80 Identities=15% Similarity=0.156 Sum_probs=53.0
Q ss_pred CeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhH
Q 032072 19 PHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGG 98 (148)
Q Consensus 19 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg 98 (148)
..|+++-|+++.++.+..++ +.+..--++++|++..... .+.. ..+.+.+|++|||-
T Consensus 12 ~LIvyFaGwgtpps~v~HLi--lpeN~dl~lcYDY~dl~ld-------fDfs--------------Ay~hirlvAwSMGV 68 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI--LPENHDLLLCYDYQDLNLD-------FDFS--------------AYRHIRLVAWSMGV 68 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc--CCCCCcEEEEeehhhcCcc-------cchh--------------hhhhhhhhhhhHHH
Confidence 38888899999888776544 3333335778887754211 1111 13467789999999
Q ss_pred HHHHHHHHhhchhhceeeEeccccc
Q 032072 99 LSITQASHKFGNKIRLAVYLAATML 123 (148)
Q Consensus 99 ~~a~~~~~~~~~~i~~~i~~~~~~~ 123 (148)
-+|-++++..+ ++..+.+++...
T Consensus 69 wvAeR~lqg~~--lksatAiNGTgL 91 (214)
T COG2830 69 WVAERVLQGIR--LKSATAINGTGL 91 (214)
T ss_pred HHHHHHHhhcc--ccceeeecCCCC
Confidence 99999888654 666677776553
No 244
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=88.31 E-value=1.8 Score=28.85 Aligned_cols=64 Identities=17% Similarity=0.324 Sum_probs=42.3
Q ss_pred CCCeEEEEccCCCCc---cchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhc
Q 032072 17 QKPHFVLVHGISGGA---WCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSL 83 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~---~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~ 83 (148)
.+++++++||..... .+-..+.+.|.+.|..+...-.++.|+.... .....++.+.+.+++++.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~---~~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGN---PENRRDWYERILDFFDKY 209 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTS---HHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCC---chhHHHHHHHHHHHHHHH
Confidence 568999999987543 3344577888888888877777776653221 134446666777777654
No 245
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=87.84 E-value=7.9 Score=27.53 Aligned_cols=52 Identities=17% Similarity=0.275 Sum_probs=35.5
Q ss_pred hhHHHHHHHHHhcCCC--CcEEEEEeChhHHHHHHHHH---hhchhhceeeEecccc
Q 032072 71 DYNKPLMDFMSSLTDN--EKVILVGHSAGGLSITQASH---KFGNKIRLAVYLAATM 122 (148)
Q Consensus 71 ~~~~~~~~~~~~~~~~--~~i~lvG~S~Gg~~a~~~~~---~~~~~i~~~i~~~~~~ 122 (148)
.+.+.+.+..+.++.. .+++|.|.|+|++-+..... ..-+++.+++..+++.
T Consensus 91 aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 91 ALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred HHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 3344455556666532 57999999999876665533 3345799999888876
No 246
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=84.68 E-value=6.3 Score=31.21 Aligned_cols=64 Identities=16% Similarity=0.159 Sum_probs=42.3
Q ss_pred CCCCeEEEEccCCCCc---cchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHh
Q 032072 16 VQKPHFVLVHGISGGA---WCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSS 82 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~---~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~ 82 (148)
+-+.+++++||..... .+-..+.+.|.+.|..+-.+-+|+.+++-..+ .+..+..+.+.+++++
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~---~~~~~~~~~~~~~~~~ 615 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRP---ENRVKVLKEILDWFKR 615 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCc---hhHHHHHHHHHHHHHH
Confidence 3567999999998643 34456778888889998888888766554332 3444455555555544
No 247
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=83.85 E-value=16 Score=27.42 Aligned_cols=97 Identities=18% Similarity=0.172 Sum_probs=58.5
Q ss_pred eEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCC---------CC-------------cchhhhHHHHH
Q 032072 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDAN---------SI-------------HSFDDYNKPLM 77 (148)
Q Consensus 20 ~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~---------~~-------------~~~~~~~~~~~ 77 (148)
.|+++--+-.-...+..+.+.+.+.|..++.+|.--.+....... .. ..++.+.+...
T Consensus 3 tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 82 (403)
T PF06792_consen 3 TIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAA 82 (403)
T ss_pred EEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHH
Confidence 344443333334556677788888999999999654433222111 00 11122233344
Q ss_pred HHHHhcCC---CCcEEEEEeChhHHHHHHHHHhhchhhceee
Q 032072 78 DFMSSLTD---NEKVILVGHSAGGLSITQASHKFGNKIRLAV 116 (148)
Q Consensus 78 ~~~~~~~~---~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i 116 (148)
.++..+.. ..-|+-+|-|.|..++.......|=-+-+++
T Consensus 83 ~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlm 124 (403)
T PF06792_consen 83 RFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLM 124 (403)
T ss_pred HHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEE
Confidence 55555542 3568899999999999999998886666643
No 248
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=80.13 E-value=9.2 Score=24.63 Aligned_cols=75 Identities=16% Similarity=0.205 Sum_probs=39.8
Q ss_pred CCeEEEEccCCCCccch--HHHHHHHHhCCcEEEEEecCC--CCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEE
Q 032072 18 KPHFVLVHGISGGAWCW--YKVRCLMENSGYKVSCINLKG--SGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILV 92 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~~~--~~~~~~l~~~~~~v~~~d~~g--~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lv 92 (148)
++.||++-|+.++...- ..+.+.|.+.|..++.+|-.. ++.+........+-.+.++.+.++.+.+.+...++++
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD~lR~~l~~dl~fs~~dR~e~~rr~~~~A~ll~~~G~ivIv 79 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGDNLRHGLNADLGFSKEDREENIRRIAEVAKLLADQGIIVIV 79 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHHHHCTTTTTT--SSHHHHHHHHHHHHHHHHHHHHTTSEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCcchhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 46799999998876542 346677878899999998432 2222211111122234444444445445433444444
No 249
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=79.36 E-value=10 Score=25.99 Aligned_cols=37 Identities=22% Similarity=0.346 Sum_probs=28.1
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEec
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINL 53 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~ 53 (148)
.-|.+++.||+++........+..+.+.++.+...+.
T Consensus 48 ~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 84 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDA 84 (299)
T ss_pred cCceEEeccCccccccCcchHHHHhhhceeEEeeecc
Confidence 4688999999999887766566777767777666654
No 250
>COG3933 Transcriptional antiterminator [Transcription]
Probab=78.96 E-value=18 Score=27.50 Aligned_cols=72 Identities=15% Similarity=0.115 Sum_probs=50.6
Q ss_pred CeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhH
Q 032072 19 PHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGG 98 (148)
Q Consensus 19 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg 98 (148)
.+|++.||+....+ ....++.|.+. --+.++|+| ...++.+..+.+.+.+++.+ ..+=.++=..||.
T Consensus 110 ~vIiiAHG~sTASS-maevanrLL~~-~~~~aiDMP----------Ldvsp~~vle~l~e~~k~~~-~~~GlllLVDMGS 176 (470)
T COG3933 110 KVIIIAHGYSTASS-MAEVANRLLGE-EIFIAIDMP----------LDVSPSDVLEKLKEYLKERD-YRSGLLLLVDMGS 176 (470)
T ss_pred eEEEEecCcchHHH-HHHHHHHHhhc-cceeeecCC----------CcCCHHHHHHHHHHHHHhcC-ccCceEEEEecch
Confidence 58889999876544 45677777643 367888988 33788899999999999987 4443333348997
Q ss_pred HHHHH
Q 032072 99 LSITQ 103 (148)
Q Consensus 99 ~~a~~ 103 (148)
..+..
T Consensus 177 L~~f~ 181 (470)
T COG3933 177 LTSFG 181 (470)
T ss_pred HHHHH
Confidence 65543
No 251
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=78.18 E-value=18 Score=24.27 Aligned_cols=41 Identities=17% Similarity=0.166 Sum_probs=33.3
Q ss_pred cchhhhHHHHHHHHHhcCCCCcEEEEEeCh----hHHHHHHHHHhhc
Q 032072 67 HSFDDYNKPLMDFMSSLTDNEKVILVGHSA----GGLSITQASHKFG 109 (148)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~----Gg~~a~~~~~~~~ 109 (148)
++.+.+++.+.+++++.. ..++++|+|. |..++-+++.+..
T Consensus 91 ~~~e~~a~al~~~i~~~~--p~lVL~~~t~~~~~grdlaprlAarLg 135 (202)
T cd01714 91 ADTLATAKALAAAIKKIG--VDLILTGKQSIDGDTGQVGPLLAELLG 135 (202)
T ss_pred CChHHHHHHHHHHHHHhC--CCEEEEcCCcccCCcCcHHHHHHHHhC
Confidence 677888888888887765 5799999998 7788888888764
No 252
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=77.56 E-value=9.2 Score=27.16 Aligned_cols=96 Identities=14% Similarity=0.005 Sum_probs=47.2
Q ss_pred EccCCCCccchHHHHHHHHhCCcEEE------EEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhc--CCCCcEEEEEeC
Q 032072 24 VHGISGGAWCWYKVRCLMENSGYKVS------CINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSL--TDNEKVILVGHS 95 (148)
Q Consensus 24 ~hG~~~~~~~~~~~~~~l~~~~~~v~------~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~lvG~S 95 (148)
.||.-|+...- -.|+..|++|+ ..+.+|+|...... ...++.+++.+-++.. ...-..++.|+=
T Consensus 11 v~G~vGn~AA~----f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v----~~~e~l~~~l~~l~~~~~~~~~davltGYl 82 (281)
T COG2240 11 VYGSVGNSAAI----FPLQRLGLDVWAVPTVQFSNHTGYGKWTGIV----MPPEQLADLLNGLEAIDKLGECDAVLTGYL 82 (281)
T ss_pred eecccccHhHH----HHHHHcCCceeeeceEEecCCCCCCCCCCcC----CCHHHHHHHHHHHHhcccccccCEEEEccC
Confidence 34555554322 23555677665 44577888755433 2233333333333331 113456677762
Q ss_pred ----hhHHHHHHHHHhhchhhceeeEecccccCCCC
Q 032072 96 ----AGGLSITQASHKFGNKIRLAVYLAATMLKLGF 127 (148)
Q Consensus 96 ----~Gg~~a~~~~~~~~~~i~~~i~~~~~~~~~~~ 127 (148)
.+-.++-.+.....+..+.+++++|.+-..+.
T Consensus 83 gs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~gg 118 (281)
T COG2240 83 GSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPGG 118 (281)
T ss_pred CCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCCc
Confidence 22223333322222345677889998765553
No 253
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=77.19 E-value=18 Score=28.12 Aligned_cols=107 Identities=13% Similarity=0.097 Sum_probs=55.5
Q ss_pred CCCCCeEEEEccCCC---Ccc--chHHHHHHHHhCC-cEEEEEecCC--CC----CCCCCCCCCcchhhh---HHHHHHH
Q 032072 15 EVQKPHFVLVHGISG---GAW--CWYKVRCLMENSG-YKVSCINLKG--SG----TDPSDANSIHSFDDY---NKPLMDF 79 (148)
Q Consensus 15 ~~~~~~vl~~hG~~~---~~~--~~~~~~~~l~~~~-~~v~~~d~~g--~g----~s~~~~~~~~~~~~~---~~~~~~~ 79 (148)
..+..++|.+-|.|. ++. .|.. +.|+..+ .-|+.+++|- +| ...++.+....+-|+ .+.+++-
T Consensus 132 p~n~tVlVWiyGGGF~sGt~SLdvYdG--k~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~N 209 (601)
T KOG4389|consen 132 PYNLTVLVWIYGGGFYSGTPSLDVYDG--KFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWVQEN 209 (601)
T ss_pred CCCceEEEEEEcCccccCCcceeeecc--ceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHHHHHHHh
Confidence 334457888887662 222 2332 3344222 2344445541 11 011222233444333 3445666
Q ss_pred HHhcC-CCCcEEEEEeChhHH-HHHHHHHhh-chhhceeeEeccccc
Q 032072 80 MSSLT-DNEKVILVGHSAGGL-SITQASHKF-GNKIRLAVYLAATML 123 (148)
Q Consensus 80 ~~~~~-~~~~i~lvG~S~Gg~-~a~~~~~~~-~~~i~~~i~~~~~~~ 123 (148)
+.... +.++|.|.|.|.|+. +..++.+-. -..++++|+-++...
T Consensus 210 i~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 210 IAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLN 256 (601)
T ss_pred HHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCC
Confidence 66664 468999999999974 555554421 125778787776553
No 254
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=75.49 E-value=3.6 Score=28.62 Aligned_cols=22 Identities=41% Similarity=0.800 Sum_probs=16.6
Q ss_pred HHHHhcCCCCcEEEEEeChhHH
Q 032072 78 DFMSSLTDNEKVILVGHSAGGL 99 (148)
Q Consensus 78 ~~~~~~~~~~~i~lvG~S~Gg~ 99 (148)
.+++.+.....|++.|||+|..
T Consensus 226 ~~~~~l~~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 226 SFFESLSDIDEIIIYGHSLGEV 247 (270)
T ss_pred HHHhhhcCCCEEEEEeCCCchh
Confidence 4445555568999999999975
No 255
>PF03283 PAE: Pectinacetylesterase
Probab=75.07 E-value=12 Score=27.70 Aligned_cols=31 Identities=39% Similarity=0.621 Sum_probs=22.5
Q ss_pred HHHHHHh-cCCCCcEEEEEeChhHHHHHHHHH
Q 032072 76 LMDFMSS-LTDNEKVILVGHSAGGLSITQASH 106 (148)
Q Consensus 76 ~~~~~~~-~~~~~~i~lvG~S~Gg~~a~~~~~ 106 (148)
+.+++.. +...++++|.|.|.||.-++..+-
T Consensus 144 l~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 144 LDDLLSNGLPNAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred HHHHHHhcCcccceEEEeccChHHHHHHHHHH
Confidence 3444444 555789999999999987776544
No 256
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=73.73 E-value=35 Score=25.55 Aligned_cols=74 Identities=11% Similarity=0.091 Sum_probs=38.4
Q ss_pred CeEEEEccCCCCc---cchHHHHHHHHhCCcEEEEEecCCCC-CCCCCCCCCcchhhhHHHHHHHHHh---cCCCCcEEE
Q 032072 19 PHFVLVHGISGGA---WCWYKVRCLMENSGYKVSCINLKGSG-TDPSDANSIHSFDDYNKPLMDFMSS---LTDNEKVIL 91 (148)
Q Consensus 19 ~~vl~~hG~~~~~---~~~~~~~~~l~~~~~~v~~~d~~g~g-~s~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~l 91 (148)
.++++++-+.... .....-...|.+.|+.++-+. +|+- ..+.......+.++....+.+.+.. +. ..++.+
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~-~g~~ac~~~g~g~~~~~~~i~~~v~~~~~~~~~~~-~~~vli 190 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPD-SGLLACGDEGKGRLAEPETIVKAAEREFSPKEDLE-GKRVLI 190 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCC-CcccccccccCCCCCCHHHHHHHHHHHHhhccccC-CceEEE
Confidence 3556665543221 123344566776777765554 3321 1111122336777787777777644 33 456666
Q ss_pred EEe
Q 032072 92 VGH 94 (148)
Q Consensus 92 vG~ 94 (148)
.|-
T Consensus 191 t~g 193 (390)
T TIGR00521 191 TAG 193 (390)
T ss_pred ecC
Confidence 665
No 257
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=73.02 E-value=37 Score=25.41 Aligned_cols=86 Identities=19% Similarity=0.254 Sum_probs=57.1
Q ss_pred CCeEEEEccCCC-------CccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEE
Q 032072 18 KPHFVLVHGISG-------GAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVI 90 (148)
Q Consensus 18 ~~~vl~~hG~~~-------~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 90 (148)
...||++||... +.++|..+++.+.+.+ -+-.+|.-..|.. ...++.+..++.++.... + .
T Consensus 171 ~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~-lip~~D~AYQGF~-------~GleeDa~~lR~~a~~~~--~--~ 238 (396)
T COG1448 171 EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERG-LIPFFDIAYQGFA-------DGLEEDAYALRLFAEVGP--E--L 238 (396)
T ss_pred CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC-Ceeeeehhhhhhc-------cchHHHHHHHHHHHHhCC--c--E
Confidence 347999998764 4457888888888665 4556676655542 346777778887876654 1 7
Q ss_pred EEEeChhHHHHHHHHHhhchhhceeeEecc
Q 032072 91 LVGHSAGGLSITQASHKFGNKIRLAVYLAA 120 (148)
Q Consensus 91 lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~ 120 (148)
+|..|+--.++ .+.+|+-++.+++.
T Consensus 239 lva~S~SKnfg-----LYgERVGa~~vva~ 263 (396)
T COG1448 239 LVASSFSKNFG-----LYGERVGALSVVAE 263 (396)
T ss_pred EEEehhhhhhh-----hhhhccceeEEEeC
Confidence 77777765544 34677777666654
No 258
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=72.21 E-value=39 Score=25.40 Aligned_cols=75 Identities=7% Similarity=0.073 Sum_probs=39.5
Q ss_pred CCeEEEEccCCCC---ccchHHHHHHHHhCCcEEEEEecCCCC-CCCCCCCCCcchhhhHHHHHHHHHh--cCCCCcEEE
Q 032072 18 KPHFVLVHGISGG---AWCWYKVRCLMENSGYKVSCINLKGSG-TDPSDANSIHSFDDYNKPLMDFMSS--LTDNEKVIL 91 (148)
Q Consensus 18 ~~~vl~~hG~~~~---~~~~~~~~~~l~~~~~~v~~~d~~g~g-~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l 91 (148)
+.++++++..... ......-...|.+.|+.++-+. +|+- ..+.......+.++....+...+.. +. ..++.+
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~gr~~~~~~I~~~~~~~~~~~~l~-gk~vlI 193 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVGPGRMAEPEEIVAAAERALSPKDLA-GKRVLI 193 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcCCCCCCCHHHHHHHHHHHhhhcccC-CCEEEE
Confidence 3456666644321 1123345567777888877554 3331 1111122235677777777766643 33 456777
Q ss_pred EEe
Q 032072 92 VGH 94 (148)
Q Consensus 92 vG~ 94 (148)
.|-
T Consensus 194 TgG 196 (399)
T PRK05579 194 TAG 196 (399)
T ss_pred eCC
Confidence 776
No 259
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=72.12 E-value=19 Score=21.61 Aligned_cols=77 Identities=16% Similarity=0.282 Sum_probs=52.6
Q ss_pred eEEEEccCCCCccchHHHHHHHHhC-CcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhH
Q 032072 20 HFVLVHGISGGAWCWYKVRCLMENS-GYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGG 98 (148)
Q Consensus 20 ~vl~~hG~~~~~~~~~~~~~~l~~~-~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg 98 (148)
.||.-|| .....+...++.+... ...+.++++.- ..+.++..+.+.+.++.....+.++++.==.||
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~~----------~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~gg 69 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLYP----------DESIEDFEEKLEEAIEELDEGDGVLILTDLGGG 69 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEETT----------TSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTS
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECcC----------CCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCC
Confidence 5788898 5555566666777645 34677777552 257788889999999888756778888766666
Q ss_pred HHHHHHHHhh
Q 032072 99 LSITQASHKF 108 (148)
Q Consensus 99 ~~a~~~~~~~ 108 (148)
...-.++...
T Consensus 70 sp~n~a~~~~ 79 (116)
T PF03610_consen 70 SPFNEAARLL 79 (116)
T ss_dssp HHHHHHHHHH
T ss_pred ccchHHHHHh
Confidence 6555554433
No 260
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=71.26 E-value=35 Score=26.54 Aligned_cols=76 Identities=17% Similarity=0.199 Sum_probs=46.7
Q ss_pred EEccCCCCccchH-HHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHHHH
Q 032072 23 LVHGISGGAWCWY-KVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSI 101 (148)
Q Consensus 23 ~~hG~~~~~~~~~-~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a 101 (148)
|=-||+.+..... ..++..++.||.|+.+|--|.-+.. ......+..+++.-. ++.|+.||.-+=|.-+
T Consensus 443 fekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~~---------~~lm~~l~k~~~~~~-pd~i~~vgealvg~ds 512 (587)
T KOG0781|consen 443 FEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHNN---------APLMTSLAKLIKVNK-PDLILFVGEALVGNDS 512 (587)
T ss_pred HhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccCC---------hhHHHHHHHHHhcCC-CceEEEehhhhhCcHH
Confidence 3346666544332 3455666789999999988754322 233445555555554 5777778777777666
Q ss_pred HHHHHhh
Q 032072 102 TQASHKF 108 (148)
Q Consensus 102 ~~~~~~~ 108 (148)
+.=+.++
T Consensus 513 v~q~~~f 519 (587)
T KOG0781|consen 513 VDQLKKF 519 (587)
T ss_pred HHHHHHH
Confidence 6655544
No 261
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=70.83 E-value=37 Score=24.77 Aligned_cols=79 Identities=15% Similarity=0.110 Sum_probs=48.1
Q ss_pred EEEccCCCCccchHHHHHHHHhCC--cEEEEEe--cCCCCCC-----------CCCCCCCcchhhhHHHHHHHHHhcCCC
Q 032072 22 VLVHGISGGAWCWYKVRCLMENSG--YKVSCIN--LKGSGTD-----------PSDANSIHSFDDYNKPLMDFMSSLTDN 86 (148)
Q Consensus 22 l~~hG~~~~~~~~~~~~~~l~~~~--~~v~~~d--~~g~g~s-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (148)
|+++|+|+-......+++.+.... ..|++++ .|+..-. ...........+..+.+.+.++.....
T Consensus 57 lL~YG~GSKr~lL~~Fa~~~l~~~~~~~~vvvnGy~p~~~~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 136 (326)
T PF04084_consen 57 LLFYGYGSKRKLLNDFAEKYLSDWGDGPVVVVNGYFPSLSIKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESRPSP 136 (326)
T ss_pred EEEEecChHHHHHHHHHHHHhhccCCCcEEEEEccCCCCcHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhccCCC
Confidence 678888887777777777665442 5666666 2221000 000111235556666666666666446
Q ss_pred CcEEEEEeChhHHH
Q 032072 87 EKVILVGHSAGGLS 100 (148)
Q Consensus 87 ~~i~lvG~S~Gg~~ 100 (148)
.+++++=|+.-|..
T Consensus 137 ~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 137 PPLYLVIHNIDGPS 150 (326)
T ss_pred CceEEEEECCCChh
Confidence 79999999999876
No 262
>COG1282 PntB NAD/NADP transhydrogenase beta subunit [Energy production and conversion]
Probab=68.64 E-value=32 Score=25.65 Aligned_cols=77 Identities=14% Similarity=0.178 Sum_probs=44.6
Q ss_pred CCCeEEEEccCCCC----ccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCC----CCcchhhhHHHHHHHHHhcCCCCc
Q 032072 17 QKPHFVLVHGISGG----AWCWYKVRCLMENSGYKVSCINLKGSGTDPSDAN----SIHSFDDYNKPLMDFMSSLTDNEK 88 (148)
Q Consensus 17 ~~~~vl~~hG~~~~----~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 88 (148)
+..-||+.+|++.. ....+++.+.|++.|..|-.--.|-.|+=..+.. ...-..|..-++++.-++....+-
T Consensus 307 nA~sVIIvPGYGmAVAQAQh~v~E~~~~L~~~Gv~VrfaIHPVAGRmPGHMNVLLAEA~VpYd~v~emddIN~dF~~tDV 386 (463)
T COG1282 307 NASSVIIVPGYGMAVAQAQHPVAEITEKLRARGVNVRFAIHPVAGRMPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDV 386 (463)
T ss_pred CCCeEEEecCchHHHHhhhhHHHHHHHHHHhcCCeeeEeecccccCCCcchhhhhhhccCCHHHHhhHHhhcchhccccE
Confidence 44679999999963 3345678888998998886655554444322211 112223444455555555553445
Q ss_pred EEEEE
Q 032072 89 VILVG 93 (148)
Q Consensus 89 i~lvG 93 (148)
+.++|
T Consensus 387 vlVIG 391 (463)
T COG1282 387 VLVIG 391 (463)
T ss_pred EEEEc
Confidence 55554
No 263
>PRK09444 pntB pyridine nucleotide transhydrogenase; Provisional
Probab=67.57 E-value=27 Score=26.67 Aligned_cols=75 Identities=13% Similarity=0.170 Sum_probs=43.8
Q ss_pred CeEEEEccCCCC----ccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCC----CCcchhhhHHHHHHHHHhcCCCCcEE
Q 032072 19 PHFVLVHGISGG----AWCWYKVRCLMENSGYKVSCINLKGSGTDPSDAN----SIHSFDDYNKPLMDFMSSLTDNEKVI 90 (148)
Q Consensus 19 ~~vl~~hG~~~~----~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~ 90 (148)
.-|++++||+.- ....+++++.|.+.|.+|-.--+|=-|+=..+.. .-.-..|...+..+.-.+..+.+=+.
T Consensus 307 ~~ViIVPGYGmAVAqAQh~v~el~~~L~~~Gv~V~faIHPVAGRMPGHMNVLLAEA~VPYd~v~eMdeIN~~F~~tDval 386 (462)
T PRK09444 307 HSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVL 386 (462)
T ss_pred CcEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccccccCCCcceeEEeecCCCHHHHHhHHhhccccccCCEEE
Confidence 579999999953 3345678889998999887666665444322211 11222344555555555555344455
Q ss_pred EEE
Q 032072 91 LVG 93 (148)
Q Consensus 91 lvG 93 (148)
++|
T Consensus 387 VIG 389 (462)
T PRK09444 387 VIG 389 (462)
T ss_pred Eec
Confidence 554
No 264
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=67.15 E-value=17 Score=25.61 Aligned_cols=73 Identities=12% Similarity=0.217 Sum_probs=35.3
Q ss_pred eEEEEccCCCCccch--HHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEE
Q 032072 20 HFVLVHGISGGAWCW--YKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILV 92 (148)
Q Consensus 20 ~vl~~hG~~~~~~~~--~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lv 92 (148)
++|++-|++++.... ..+.+.+.+.+..+..++-...+..................+...++.....+.++++
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~~~~~~y~~~~~Ek~~R~~l~s~v~r~ls~~~iVI~ 76 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLGIDRNDYADSKKEKEARGSLKSAVERALSKDTIVIL 76 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH-TTSSS--GGGHHHHHHHHHHHHHHHHTT-SEEEE
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccccchhhhhchhhhHHHHHHHHHHHHHhhccCeEEEE
Confidence 688899998876543 3466677778888888874433311111112233444555566666555323455544
No 265
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=66.33 E-value=27 Score=21.18 Aligned_cols=71 Identities=20% Similarity=0.209 Sum_probs=45.5
Q ss_pred eEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHH
Q 032072 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGL 99 (148)
Q Consensus 20 ~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~ 99 (148)
.||.-|| ..........+.+......+.+++..- ..+.++..+.+.+.++.....+.++++-==+||.
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~~----------~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GGS 70 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFPP----------GESPDDLLEKIKAALAELDSGEGVLILTDLFGGS 70 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeCC----------CCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCCC
Confidence 5788898 444445555566653334666776552 2567788888888888886456677666555775
Q ss_pred HHH
Q 032072 100 SIT 102 (148)
Q Consensus 100 ~a~ 102 (148)
..-
T Consensus 71 p~n 73 (122)
T cd00006 71 PNN 73 (122)
T ss_pred HHH
Confidence 543
No 266
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=65.04 E-value=16 Score=26.44 Aligned_cols=30 Identities=20% Similarity=0.313 Sum_probs=22.2
Q ss_pred CCCCeEEEEccCCCCccchHH--HHHHHHhCC
Q 032072 16 VQKPHFVLVHGISGGAWCWYK--VRCLMENSG 45 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~~~~--~~~~l~~~~ 45 (148)
.++|.++-+||+.|+...|.. +++.+...|
T Consensus 107 p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNYVAEIIAENLYRGG 138 (344)
T ss_pred CCCCeEEEecCCCCCchhHHHHHHHHHHHhcc
Confidence 478999999999999887753 455555444
No 267
>KOG0736 consensus Peroxisome assembly factor 2 containing the AAA+-type ATPase domain [Posttranslational modification, protein turnover, chaperones]
Probab=64.47 E-value=40 Score=27.91 Aligned_cols=82 Identities=13% Similarity=0.110 Sum_probs=51.2
Q ss_pred HHHHHHhCCcEEEEEec-----CCCCCCCCCCCCCcchhhhHHHHHHHHHhcC--CCCcEEEEEeChhHHHHHHHHHhhc
Q 032072 37 VRCLMENSGYKVSCINL-----KGSGTDPSDANSIHSFDDYNKPLMDFMSSLT--DNEKVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 37 ~~~~l~~~~~~v~~~d~-----~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
+.+..++.-..|+++|= |..|.+.. ..--++..+.++.+-++.+. ....+.++|-..=--+.=. +...|
T Consensus 756 VFerAR~A~PCVIFFDELDSlAP~RG~sGD---SGGVMDRVVSQLLAELDgls~~~s~~VFViGATNRPDLLDp-ALLRP 831 (953)
T KOG0736|consen 756 VFERARSAAPCVIFFDELDSLAPNRGRSGD---SGGVMDRVVSQLLAELDGLSDSSSQDVFVIGATNRPDLLDP-ALLRP 831 (953)
T ss_pred HHHHhhccCCeEEEeccccccCccCCCCCC---ccccHHHHHHHHHHHhhcccCCCCCceEEEecCCCccccCh-hhcCC
Confidence 34455556677888873 22333221 22466788888888888886 3568999985543322222 23447
Q ss_pred hhhceeeEecccc
Q 032072 110 NKIRLAVYLAATM 122 (148)
Q Consensus 110 ~~i~~~i~~~~~~ 122 (148)
.|+++++.+++.-
T Consensus 832 GRFDKLvyvG~~~ 844 (953)
T KOG0736|consen 832 GRFDKLVYVGPNE 844 (953)
T ss_pred CccceeEEecCCc
Confidence 7999999999764
No 268
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=64.23 E-value=41 Score=23.14 Aligned_cols=42 Identities=14% Similarity=0.287 Sum_probs=27.6
Q ss_pred CCCCCeEEEEccCCCCccchHH-HHHHHHhCCc-EEEEEecCCC
Q 032072 15 EVQKPHFVLVHGISGGAWCWYK-VRCLMENSGY-KVSCINLKGS 56 (148)
Q Consensus 15 ~~~~~~vl~~hG~~~~~~~~~~-~~~~l~~~~~-~v~~~d~~g~ 56 (148)
.+...+|++.||....+..... +-..+.+.|| .|++...-|+
T Consensus 135 ~k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~y 178 (265)
T COG4822 135 NKDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGY 178 (265)
T ss_pred CcCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCC
Confidence 3456789999998876655444 4445666788 5666665554
No 269
>COG0218 Predicted GTPase [General function prediction only]
Probab=63.44 E-value=15 Score=24.76 Aligned_cols=34 Identities=12% Similarity=0.300 Sum_probs=20.9
Q ss_pred EEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcC
Q 032072 48 VSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLT 84 (148)
Q Consensus 48 v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (148)
+..+|+||+|...-+. .-.+.|.+.+.++++...
T Consensus 72 ~~lVDlPGYGyAkv~k---~~~e~w~~~i~~YL~~R~ 105 (200)
T COG0218 72 LRLVDLPGYGYAKVPK---EVKEKWKKLIEEYLEKRA 105 (200)
T ss_pred EEEEeCCCcccccCCH---HHHHHHHHHHHHHHhhch
Confidence 5788999999765432 233455555566665543
No 270
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=62.60 E-value=14 Score=26.04 Aligned_cols=28 Identities=21% Similarity=0.254 Sum_probs=20.0
Q ss_pred HHHHhcCCCCcEEEEEeChhHHHHHHHHH
Q 032072 78 DFMSSLTDNEKVILVGHSAGGLSITQASH 106 (148)
Q Consensus 78 ~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~ 106 (148)
+.++... .++-.++|||+|-+.+..++.
T Consensus 74 ~~l~~~G-i~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 74 RLWRSWG-VRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHcC-CcccEEEecCHHHHHHHHHhC
Confidence 3444444 567899999999887776654
No 271
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=62.26 E-value=44 Score=22.28 Aligned_cols=70 Identities=14% Similarity=0.213 Sum_probs=39.7
Q ss_pred HHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhch--hhceee
Q 032072 39 CLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGN--KIRLAV 116 (148)
Q Consensus 39 ~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~--~i~~~i 116 (148)
+.+.+.++.++.+|-+|... .-.+..+.+.++++...+.+.+.++.-++|.. .+..+..+-+ .+.++|
T Consensus 77 ~~~~~~~~D~vlIDT~Gr~~---------~d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~-~~~~~~~~~~~~~~~~lI 146 (196)
T PF00448_consen 77 EKFRKKGYDLVLIDTAGRSP---------RDEELLEELKKLLEALNPDEVHLVLSATMGQE-DLEQALAFYEAFGIDGLI 146 (196)
T ss_dssp HHHHHTTSSEEEEEE-SSSS---------THHHHHHHHHHHHHHHSSSEEEEEEEGGGGGH-HHHHHHHHHHHSSTCEEE
T ss_pred HHHhhcCCCEEEEecCCcch---------hhHHHHHHHHHHhhhcCCccceEEEecccChH-HHHHHHHHhhcccCceEE
Confidence 34445789999999988632 22455566666666666444555555555544 4434333322 367777
Q ss_pred Ee
Q 032072 117 YL 118 (148)
Q Consensus 117 ~~ 118 (148)
+.
T Consensus 147 lT 148 (196)
T PF00448_consen 147 LT 148 (196)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 272
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=61.89 E-value=21 Score=23.88 Aligned_cols=42 Identities=19% Similarity=0.279 Sum_probs=27.5
Q ss_pred CCeEEEEccCCCCccc---hHHHHHHHHhCCcEEEEEecCCCCCC
Q 032072 18 KPHFVLVHGISGGAWC---WYKVRCLMENSGYKVSCINLKGSGTD 59 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~~---~~~~~~~l~~~~~~v~~~d~~g~g~s 59 (148)
+.+|+++||-....-. .....+.|.+.+.++-...++|.|++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~ 199 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHE 199 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCC
Confidence 5689999998765433 33566778878888888888876664
No 273
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=60.71 E-value=9.5 Score=25.07 Aligned_cols=34 Identities=15% Similarity=0.244 Sum_probs=21.8
Q ss_pred CeEEEEccC---CCCccchHHHHHHHHhCCcEEEEEe
Q 032072 19 PHFVLVHGI---SGGAWCWYKVRCLMENSGYKVSCIN 52 (148)
Q Consensus 19 ~~vl~~hG~---~~~~~~~~~~~~~l~~~~~~v~~~d 52 (148)
..||++|.. ..+......++..|.+.||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 358888842 1233445567777888888887664
No 274
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=60.14 E-value=17 Score=25.71 Aligned_cols=28 Identities=14% Similarity=0.152 Sum_probs=19.9
Q ss_pred HHHHhcCCCCcEEEEEeChhHHHHHHHHH
Q 032072 78 DFMSSLTDNEKVILVGHSAGGLSITQASH 106 (148)
Q Consensus 78 ~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~ 106 (148)
+.++... .++..++|||+|=+.+..++.
T Consensus 68 ~~l~~~g-~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 68 RALLALL-PRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHhcC-CCCcEEeecCHHHHHHHHHhC
Confidence 3444444 578899999999877776653
No 275
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=60.04 E-value=18 Score=23.36 Aligned_cols=24 Identities=21% Similarity=0.165 Sum_probs=19.6
Q ss_pred CCcEEEEEeChhHHHHHHHHHhhc
Q 032072 86 NEKVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
...-.+.|-|.|+.++..++...+
T Consensus 25 i~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 25 PLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred CCCCEEEEECHHHHHHHHHHcCCC
Confidence 346778899999999999988543
No 276
>PRK06490 glutamine amidotransferase; Provisional
Probab=58.47 E-value=59 Score=22.48 Aligned_cols=35 Identities=20% Similarity=0.341 Sum_probs=23.8
Q ss_pred hhhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHH
Q 032072 70 DDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQAS 105 (148)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~ 105 (148)
..|...+.++++... ..++=++|.|+|..+...++
T Consensus 69 ~~wi~~~~~~i~~~~-~~~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 69 DDFIRREIDWISVPL-KENKPFLGICLGAQMLARHL 103 (239)
T ss_pred chHHHHHHHHHHHHH-HCCCCEEEECHhHHHHHHHc
Confidence 345666666776543 23456889999998877774
No 277
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=57.76 E-value=9.9 Score=27.25 Aligned_cols=29 Identities=21% Similarity=0.255 Sum_probs=20.5
Q ss_pred HHHHHhcCCCCcEEEEEeChhHHHHHHHHH
Q 032072 77 MDFMSSLTDNEKVILVGHSAGGLSITQASH 106 (148)
Q Consensus 77 ~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~ 106 (148)
.+.++... ..+-.++|||+|=+.|+.++.
T Consensus 75 ~~~l~~~G-i~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 75 ARLLRSWG-IKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHTT-HCESEEEESTTHHHHHHHHTT
T ss_pred hhhhcccc-cccceeeccchhhHHHHHHCC
Confidence 34445544 678899999999877776643
No 278
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=57.68 E-value=19 Score=25.25 Aligned_cols=21 Identities=29% Similarity=0.235 Sum_probs=16.9
Q ss_pred CCcEEEEEeChhHHHHHHHHH
Q 032072 86 NEKVILVGHSAGGLSITQASH 106 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~ 106 (148)
..+-.++|||+|=+.+..++.
T Consensus 82 i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred CCCCEEeecCHHHHHHHHHhC
Confidence 567899999999887776654
No 279
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=57.29 E-value=54 Score=21.70 Aligned_cols=58 Identities=17% Similarity=0.277 Sum_probs=26.2
Q ss_pred cCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhc---CCCCcEEEEE
Q 032072 26 GISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSL---TDNEKVILVG 93 (148)
Q Consensus 26 G~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~lvG 93 (148)
|++|+...=..+++.+++..-.++++|+-.+ .+.++..+.+..+++.+ .+..+|+++-
T Consensus 40 GfsG~~~le~~~a~~ia~~~a~~~~ld~~~N----------~~~~~~~~~~~~fv~~iR~~hP~tPIllv~ 100 (178)
T PF14606_consen 40 GFSGNGKLEPEVADLIAEIDADLIVLDCGPN----------MSPEEFRERLDGFVKTIREAHPDTPILLVS 100 (178)
T ss_dssp E-TCCCS--HHHHHHHHHS--SEEEEEESHH----------CCTTTHHHHHHHHHHHHHTT-SSS-EEEEE
T ss_pred eecCccccCHHHHHHHhcCCCCEEEEEeecC----------CCHHHHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 4444443333444555444445555554322 34445555666565555 3456777775
No 280
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=56.97 E-value=14 Score=26.03 Aligned_cols=34 Identities=21% Similarity=0.367 Sum_probs=24.1
Q ss_pred CeEEEEccCCCCccchHHHHHHHHhCCcEEEEEe
Q 032072 19 PHFVLVHGISGGAWCWYKVRCLMENSGYKVSCIN 52 (148)
Q Consensus 19 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d 52 (148)
..||++|-...+......++..|.+.||.++.++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 3677888655555556667788888888887664
No 281
>PRK11460 putative hydrolase; Provisional
Probab=56.53 E-value=48 Score=22.55 Aligned_cols=43 Identities=14% Similarity=0.045 Sum_probs=27.9
Q ss_pred CCCeEEEEccCCCCccc---hHHHHHHHHhCCcEEEEEecCCCCCC
Q 032072 17 QKPHFVLVHGISGGAWC---WYKVRCLMENSGYKVSCINLKGSGTD 59 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~---~~~~~~~l~~~~~~v~~~d~~g~g~s 59 (148)
..++|+++||-....-. -....+.|.+.+..+....+++.|+.
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~ 192 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHA 192 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCC
Confidence 45789999998765333 33456677767776666666665543
No 282
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=56.42 E-value=32 Score=19.38 Aligned_cols=24 Identities=25% Similarity=0.386 Sum_probs=17.3
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhh
Q 032072 85 DNEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 85 ~~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
..+++.++|-|.|=.++.+.+.-+
T Consensus 38 GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 38 GPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp S-SEEEEES-SSHHHHHHHHHHHH
T ss_pred CCceEEEEecCCcccHHHHHHHHh
Confidence 357899999999977777666655
No 283
>PRK10279 hypothetical protein; Provisional
Probab=55.09 E-value=23 Score=25.44 Aligned_cols=31 Identities=19% Similarity=0.167 Sum_probs=22.6
Q ss_pred HHHHHhcCCCCcEEEEEeChhHHHHHHHHHhh
Q 032072 77 MDFMSSLTDNEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 77 ~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
.+.+++.. ...-.++|-|+|+.++..|+...
T Consensus 24 L~aL~E~g-i~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 24 INALKKVG-IEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHcC-CCcCEEEEEcHHHHHHHHHHcCC
Confidence 34444444 45677899999999999998744
No 284
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=54.22 E-value=15 Score=26.48 Aligned_cols=37 Identities=19% Similarity=0.251 Sum_probs=28.3
Q ss_pred CcEEEEEeChhHHHHHHHHHhhc----------------hhhceeeEeccccc
Q 032072 87 EKVILVGHSAGGLSITQASHKFG----------------NKIRLAVYLAATML 123 (148)
Q Consensus 87 ~~i~lvG~S~Gg~~a~~~~~~~~----------------~~i~~~i~~~~~~~ 123 (148)
.++.|+|+|-|+.+.-.++.+.. .+|+.+-.+++...
T Consensus 193 ~~~~LiGFSKGcvVLNqll~El~~~~~~~~~~~~~~~~l~~I~~~~wLD~Gh~ 245 (303)
T PF10561_consen 193 PPLTLIGFSKGCVVLNQLLYELHYLEELARVDKEIERFLSRISDMYWLDGGHN 245 (303)
T ss_pred CceEEEEecCcchHHHHHHHHHHhhhcccCCchHHHHHHHhhheEEEeccCCC
Confidence 47999999999998887776554 25777777777654
No 285
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=54.07 E-value=20 Score=24.37 Aligned_cols=34 Identities=18% Similarity=0.330 Sum_probs=23.8
Q ss_pred CeEEEEccC-CCCccchHHHHHHHHhCCcEEEEEe
Q 032072 19 PHFVLVHGI-SGGAWCWYKVRCLMENSGYKVSCIN 52 (148)
Q Consensus 19 ~~vl~~hG~-~~~~~~~~~~~~~l~~~~~~v~~~d 52 (148)
..||++|.. ..+......++..|.+.||.++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 468888864 3344556677888888899887764
No 286
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=53.43 E-value=24 Score=25.38 Aligned_cols=31 Identities=10% Similarity=0.072 Sum_probs=22.5
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHh
Q 032072 76 LMDFMSSLTDNEKVILVGHSAGGLSITQASHK 107 (148)
Q Consensus 76 ~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~ 107 (148)
+.+.+++.. ...=.++|-|+|+.++..|+..
T Consensus 33 vL~aLee~g-i~~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 33 VIKALEEAG-IPVDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHHcC-CCCCEEEEECHHHHHHHHHHcC
Confidence 344444444 4556788999999999999875
No 287
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=52.95 E-value=80 Score=22.38 Aligned_cols=65 Identities=11% Similarity=0.171 Sum_probs=37.7
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhch-hhceeeE
Q 032072 44 SGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGN-KIRLAVY 117 (148)
Q Consensus 44 ~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~-~i~~~i~ 117 (148)
.++.++.+|.+|..... .+..+.+.++++...+...+.++.-++++.-+...+.++.. .+.++|+
T Consensus 153 ~~~D~ViIDt~Gr~~~~---------~~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~ 218 (270)
T PRK06731 153 ARVDYILIDTAGKNYRA---------SETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVF 218 (270)
T ss_pred CCCCEEEEECCCCCcCC---------HHHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEE
Confidence 36889999988763311 23344444555544433445555556777777777666543 4666665
No 288
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=51.86 E-value=16 Score=27.57 Aligned_cols=26 Identities=23% Similarity=0.275 Sum_probs=20.5
Q ss_pred CcEEEEEeChhHHHHHHHHHhhchhh
Q 032072 87 EKVILVGHSAGGLSITQASHKFGNKI 112 (148)
Q Consensus 87 ~~i~lvG~S~Gg~~a~~~~~~~~~~i 112 (148)
.+=++.|-|.|+.++..++...++.+
T Consensus 101 ~p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 101 LPRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred CCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 34479999999999999988665543
No 289
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=51.47 E-value=29 Score=22.66 Aligned_cols=23 Identities=22% Similarity=0.261 Sum_probs=18.6
Q ss_pred CCcEEEEEeChhHHHHHHHHHhh
Q 032072 86 NEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
...=.++|-|.|+.++..++...
T Consensus 26 ~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 26 ILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred CCcceEEEECHHHHHHHHHHcCC
Confidence 34467889999999999998744
No 290
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=51.47 E-value=65 Score=20.90 Aligned_cols=27 Identities=11% Similarity=0.283 Sum_probs=15.9
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEEeChhHH
Q 032072 71 DYNKPLMDFMSSLTDNEKVILVGHSAGGL 99 (148)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~ 99 (148)
+..+.+.+.++... ..++++|-..-..
T Consensus 88 ~~~~~i~~~I~~~~--pdiv~vglG~PkQ 114 (172)
T PF03808_consen 88 EEEEAIINRINASG--PDIVFVGLGAPKQ 114 (172)
T ss_pred hhHHHHHHHHHHcC--CCEEEEECCCCHH
Confidence 33445555665554 5788887555544
No 291
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=49.40 E-value=34 Score=24.18 Aligned_cols=31 Identities=10% Similarity=0.053 Sum_probs=22.2
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHh
Q 032072 76 LMDFMSSLTDNEKVILVGHSAGGLSITQASHK 107 (148)
Q Consensus 76 ~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~ 107 (148)
+.+.+++.. ..-=.+.|-|+|+.++..|+..
T Consensus 28 VL~aLeE~g-i~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 28 ILQALEEAG-IPIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHcC-CCccEEEEECHHHHHHHHHHcC
Confidence 334444444 4455788999999999999875
No 292
>PF14359 DUF4406: Domain of unknown function (DUF4406)
Probab=49.32 E-value=51 Score=19.08 Aligned_cols=68 Identities=18% Similarity=0.285 Sum_probs=43.4
Q ss_pred cchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEE-E--eChhHHHHHHHHHhh
Q 032072 32 WCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILV-G--HSAGGLSITQASHKF 108 (148)
Q Consensus 32 ~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lv-G--~S~Gg~~a~~~~~~~ 108 (148)
..|...++.|.+.|+.|+.+-..+. + ...+.++..+.....+.. -+.++++ | .|-|+.+=..+|...
T Consensus 16 ~~f~~~a~~L~~~G~~vvnPa~~~~------~-~~~~~~~ym~~~l~~L~~---cD~i~~l~gWe~S~GA~~E~~~A~~l 85 (92)
T PF14359_consen 16 PAFNAAAKRLRAKGYEVVNPAELGI------P-EGLSWEEYMRICLAMLSD---CDAIYMLPGWENSRGARLEHELAKKL 85 (92)
T ss_pred HHHHHHHHHHHHCCCEEeCchhhCC------C-CCCCHHHHHHHHHHHHHh---CCEEEEcCCcccCcchHHHHHHHHHC
Confidence 3455677888889999887654411 1 113455666555555553 3466655 3 799999888888765
Q ss_pred c
Q 032072 109 G 109 (148)
Q Consensus 109 ~ 109 (148)
.
T Consensus 86 G 86 (92)
T PF14359_consen 86 G 86 (92)
T ss_pred C
Confidence 4
No 293
>PHA02114 hypothetical protein
Probab=49.23 E-value=36 Score=20.15 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=26.5
Q ss_pred CeEEEEccCCCCccchHHHHHHHHhCCcEEEEEe
Q 032072 19 PHFVLVHGISGGAWCWYKVRCLMENSGYKVSCIN 52 (148)
Q Consensus 19 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d 52 (148)
.+|++--.+..+...|..+...|.+.||.|++-.
T Consensus 83 gtivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 83 GTIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred CeEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 4667767777788888888888888899887654
No 294
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=49.09 E-value=45 Score=21.52 Aligned_cols=45 Identities=16% Similarity=0.228 Sum_probs=23.6
Q ss_pred hhhHHHHHHHHHhcC-CCCcEEEEEeChhHHHHHHHHHhhchhhce
Q 032072 70 DDYNKPLMDFMSSLT-DNEKVILVGHSAGGLSITQASHKFGNKIRL 114 (148)
Q Consensus 70 ~~~~~~~~~~~~~~~-~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~ 114 (148)
++..+.+.++++.+. ...+|.+.|-|..|.+.+.++...++.+..
T Consensus 51 ~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~ 96 (160)
T PF08484_consen 51 EQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDY 96 (160)
T ss_dssp HHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEE
Confidence 344445555655553 357899999999999888887765544444
No 295
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=49.08 E-value=32 Score=24.60 Aligned_cols=31 Identities=13% Similarity=0.176 Sum_probs=23.1
Q ss_pred HHHHHhcCCCCcEEEEEeChhHHHHHHHHHhh
Q 032072 77 MDFMSSLTDNEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 77 ~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
.+.+.+.. ...-.+.|-|+|+.++..++...
T Consensus 30 l~aL~e~g-i~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 30 LKALEEAG-IPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHcC-CCccEEEecCHHHHHHHHHHcCC
Confidence 34444444 56778899999999999998843
No 296
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=48.84 E-value=37 Score=23.08 Aligned_cols=22 Identities=27% Similarity=0.234 Sum_probs=18.1
Q ss_pred CcEEEEEeChhHHHHHHHHHhh
Q 032072 87 EKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 87 ~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
+.-.++|-|.|+.++..++...
T Consensus 28 ~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 28 EPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred CceEEEEeCHHHHHHHHHHcCC
Confidence 4457999999999999998743
No 297
>PRK02399 hypothetical protein; Provisional
Probab=48.72 E-value=1.2e+02 Score=23.07 Aligned_cols=96 Identities=20% Similarity=0.238 Sum_probs=55.6
Q ss_pred eEEEEccCCCC-ccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCC------------------C--Cc--chhhhHHHH
Q 032072 20 HFVLVHGISGG-AWCWYKVRCLMENSGYKVSCINLKGSGTDPSDAN------------------S--IH--SFDDYNKPL 76 (148)
Q Consensus 20 ~vl~~hG~~~~-~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~------------------~--~~--~~~~~~~~~ 76 (148)
.|+++ |...+ ...+..+.+.+.+.|..++.+|.-..+......+ . .. -++.+.+..
T Consensus 5 ~I~ii-gT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga 83 (406)
T PRK02399 5 RIYIA-GTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGA 83 (406)
T ss_pred EEEEE-eccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHH
Confidence 34444 44444 3455566677777799999999743331111100 0 00 112223334
Q ss_pred HHHHHhcC---CCCcEEEEEeChhHHHHHHHHHhhchhhceee
Q 032072 77 MDFMSSLT---DNEKVILVGHSAGGLSITQASHKFGNKIRLAV 116 (148)
Q Consensus 77 ~~~~~~~~---~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i 116 (148)
..+++++. ...-++-+|-|.|..++....+..|--+-+++
T Consensus 84 ~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlm 126 (406)
T PRK02399 84 AAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLM 126 (406)
T ss_pred HHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEE
Confidence 44555442 24568899999999999999988886665533
No 298
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=48.56 E-value=21 Score=26.91 Aligned_cols=30 Identities=13% Similarity=0.196 Sum_probs=22.8
Q ss_pred CCcEEEEEeChhHHHHHHHHHhhchhhcee
Q 032072 86 NEKVILVGHSAGGLSITQASHKFGNKIRLA 115 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~ 115 (148)
..+=++.|-|.|+.++..++...++.+..+
T Consensus 94 llp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 94 LLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred CCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 345568999999999999998666555443
No 299
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=48.50 E-value=60 Score=23.86 Aligned_cols=35 Identities=11% Similarity=0.099 Sum_probs=25.8
Q ss_pred EEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCC
Q 032072 21 FVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSG 57 (148)
Q Consensus 21 vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g 57 (148)
|+|+|.. -+.+|..+++.|.+.|+.|.++-..+..
T Consensus 2 il~~~~~--~p~~~~~la~~L~~~G~~v~~~~~~~~~ 36 (396)
T cd03818 2 ILFVHQN--FPGQFRHLAPALAAQGHEVVFLTEPNAA 36 (396)
T ss_pred EEEECCC--CchhHHHHHHHHHHCCCEEEEEecCCCC
Confidence 6788753 3345788999999899998877665543
No 300
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=48.20 E-value=94 Score=22.02 Aligned_cols=70 Identities=9% Similarity=0.110 Sum_probs=43.0
Q ss_pred CCCeEEEEccCCCCcc--chHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEe
Q 032072 17 QKPHFVLVHGISGGAW--CWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGH 94 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~--~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~ 94 (148)
..++||++.|+-++.. ..+.+.+.|...|++|..+..|.- .+....-+-.+-..++....+.+.=.
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt~------------eE~~~p~lWRfw~~lP~~G~i~IF~R 121 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPSA------------EELDHDFLWRIHKALPERGEIGIFNR 121 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCCH------------HHHcCchHHHHHHhCCCCCeEEEEcC
Confidence 4589999999976544 345677777767888888764421 11112234456666665666666655
Q ss_pred ChhH
Q 032072 95 SAGG 98 (148)
Q Consensus 95 S~Gg 98 (148)
|+=+
T Consensus 122 SWY~ 125 (264)
T TIGR03709 122 SHYE 125 (264)
T ss_pred cccc
Confidence 5433
No 301
>COG1926 Predicted phosphoribosyltransferases [General function prediction only]
Probab=48.10 E-value=80 Score=21.64 Aligned_cols=48 Identities=19% Similarity=0.336 Sum_probs=33.7
Q ss_pred hhhhHHHHHHHHHhcCCCCcEEEEEeChhH-HHHHHHHHhhchhhceee
Q 032072 69 FDDYNKPLMDFMSSLTDNEKVILVGHSAGG-LSITQASHKFGNKIRLAV 116 (148)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg-~~a~~~~~~~~~~i~~~i 116 (148)
-.+.-+.+...+..+.+.++++++|-+-|| .+++..+..+.....-++
T Consensus 7 R~dAGr~La~~l~~~~~~~~~iVlaLpRGGvpva~evA~~lga~ldvli 55 (220)
T COG1926 7 RTDAGRKLAQELAALRDLKDVIVLALPRGGVPVAFEVAQALGAPLDVLI 55 (220)
T ss_pred HHHHHHHHHHHHHhhccCCCcEEEEecCCCchHHHHHHHHhCCCeeEEE
Confidence 345555666666666656889999999999 588888887765444333
No 302
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=47.51 E-value=65 Score=22.48 Aligned_cols=39 Identities=13% Similarity=0.158 Sum_probs=24.2
Q ss_pred CCCCeEEEEccCCCCccc-hHHHHHHHHhCCcE-EEEEecC
Q 032072 16 VQKPHFVLVHGISGGAWC-WYKVRCLMENSGYK-VSCINLK 54 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~-~~~~~~~l~~~~~~-v~~~d~~ 54 (148)
+..+.|++++-.++.... ...+.+.+.+.|+. +-.++.+
T Consensus 26 ~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 26 GEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 455778888866554443 33456667777874 5556654
No 303
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=47.48 E-value=23 Score=25.82 Aligned_cols=24 Identities=13% Similarity=0.187 Sum_probs=18.5
Q ss_pred CCcEEEEEeChhHHHHHHHHHhhc
Q 032072 86 NEKVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
..+-++.|-|.|+.++..++...+
T Consensus 95 l~p~~i~GsSaGAivaa~~~~~t~ 118 (323)
T cd07231 95 LLPRVIAGSSVGSIVCAIIATRTD 118 (323)
T ss_pred CCCCEEEEECHHHHHHHHHHcCCH
Confidence 344569999999999998877543
No 304
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=46.65 E-value=60 Score=19.10 Aligned_cols=31 Identities=13% Similarity=0.325 Sum_probs=21.7
Q ss_pred EEEEccCCCCccchHHHHHHHHhC-CcEEEEEec
Q 032072 21 FVLVHGISGGAWCWYKVRCLMENS-GYKVSCINL 53 (148)
Q Consensus 21 vl~~hG~~~~~~~~~~~~~~l~~~-~~~v~~~d~ 53 (148)
||++.|..++... .+++.|++. |+.++..|-
T Consensus 1 vI~I~G~~gsGKS--T~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKS--TLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHH--HHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCHH--HHHHHHHHHHCCeEEEecc
Confidence 5788888876653 455566653 888888886
No 305
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=46.10 E-value=75 Score=20.04 Aligned_cols=14 Identities=14% Similarity=0.323 Sum_probs=10.0
Q ss_pred HHHHHhCCcEEEEE
Q 032072 38 RCLMENSGYKVSCI 51 (148)
Q Consensus 38 ~~~l~~~~~~v~~~ 51 (148)
+..|.+.|++|+++
T Consensus 101 ~~~L~~~GwrvlvV 114 (150)
T COG3727 101 IKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHcCCeEEEE
Confidence 45677789998655
No 306
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=45.11 E-value=51 Score=24.56 Aligned_cols=47 Identities=15% Similarity=0.283 Sum_probs=34.5
Q ss_pred HHHHHHHhcC--CCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecccc
Q 032072 75 PLMDFMSSLT--DNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 75 ~~~~~~~~~~--~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
.+.+++++.. ..++++|.|.|-=|-.++..+. ...||++++-+.-..
T Consensus 158 ~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~ 206 (367)
T PF10142_consen 158 AVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDV 206 (367)
T ss_pred HHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEcc
Confidence 3445554441 3689999999999999999998 456788887776544
No 307
>PRK05665 amidotransferase; Provisional
Probab=44.78 E-value=43 Score=23.18 Aligned_cols=37 Identities=16% Similarity=0.174 Sum_probs=26.6
Q ss_pred chhhhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHH
Q 032072 68 SFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQAS 105 (148)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~ 105 (148)
....|.+.+.++++... ...+=++|.|+|..+...++
T Consensus 72 ~~~pwi~~l~~~i~~~~-~~~~PilGIC~GhQlla~Al 108 (240)
T PRK05665 72 GTDPWIQTLKTYLLKLY-ERGDKLLGVCFGHQLLALLL 108 (240)
T ss_pred ccchHHHHHHHHHHHHH-hcCCCEEEEeHHHHHHHHHh
Confidence 34567777888887764 23445889999998777665
No 308
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=44.56 E-value=27 Score=26.20 Aligned_cols=30 Identities=13% Similarity=0.103 Sum_probs=22.5
Q ss_pred CCcEEEEEeChhHHHHHHHHHhhchhhcee
Q 032072 86 NEKVILVGHSAGGLSITQASHKFGNKIRLA 115 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~ 115 (148)
..+=++.|-|.|+.++..++...++.+..+
T Consensus 110 l~p~~i~GtS~Gaivaa~~a~~~~~e~~~~ 139 (391)
T cd07229 110 LLPRIITGTATGALIAALVGVHTDEELLRF 139 (391)
T ss_pred CCCceEEEecHHHHHHHHHHcCCHHHHHHH
Confidence 345568999999999999998655544443
No 309
>cd01535 4RHOD_Repeat_4 Member of the Rhodanese Homology Domain superfamily, repeat 4. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative catalytic Cys residue.
Probab=44.34 E-value=80 Score=19.86 Aligned_cols=58 Identities=16% Similarity=0.169 Sum_probs=28.9
Q ss_pred CCcEEEEEecCCCCCCCC-CCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHH
Q 032072 44 SGYKVSCINLKGSGTDPS-DANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQAS 105 (148)
Q Consensus 44 ~~~~v~~~d~~g~g~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~ 105 (148)
.+..+.++|.|....-.. +.+. ...-....+.+.+..+....++++++.| | ..+..++
T Consensus 8 ~~~~~~ivDvR~~~e~~~gHIpg--Ai~~~~~~l~~~l~~l~~~~~vVv~c~~-g-~~a~~aa 66 (145)
T cd01535 8 EGGQTAVVDVTASANYVKRHIPG--AWWVLRAQLAQALEKLPAAERYVLTCGS-S-LLARFAA 66 (145)
T ss_pred CCCCeEEEECCCHHHHHcCCCCC--ceeCCHHHHHHHHHhcCCCCCEEEEeCC-C-hHHHHHH
Confidence 555788899876321111 1101 1111223445555556545778888877 4 3444443
No 310
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=44.21 E-value=39 Score=21.85 Aligned_cols=35 Identities=17% Similarity=0.266 Sum_probs=26.4
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEE
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCI 51 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~ 51 (148)
..+.|+++-|-+.+...=...++.|.+.|+.|.++
T Consensus 24 ~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~ 58 (169)
T PF03853_consen 24 KGPRVLILCGPGNNGGDGLVAARHLANRGYNVTVY 58 (169)
T ss_dssp TT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEE
Confidence 56788888888877766667889998899998773
No 311
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=43.52 E-value=45 Score=22.48 Aligned_cols=30 Identities=17% Similarity=0.083 Sum_probs=21.9
Q ss_pred HHHhcCCCCcEEEEEeChhHHHHHHHHHhhc
Q 032072 79 FMSSLTDNEKVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 79 ~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
.+.+.. ...=.+.|-|.|+.++..++...+
T Consensus 19 aL~e~g-~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 19 ALAEAG-IEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHcC-CCCCEEEEECHHHHHHHHHHcCCc
Confidence 333333 345578899999999999998664
No 312
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=43.14 E-value=56 Score=21.12 Aligned_cols=23 Identities=26% Similarity=0.153 Sum_probs=18.5
Q ss_pred CcEEEEEeChhHHHHHHHHHhhc
Q 032072 87 EKVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 87 ~~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
..=.++|-|.|+.++..++....
T Consensus 28 ~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 28 EIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred CeeEEEEeCHHHHHHHHHHcCCC
Confidence 45678899999999998887543
No 313
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=43.01 E-value=1.2e+02 Score=21.40 Aligned_cols=75 Identities=17% Similarity=0.199 Sum_probs=43.5
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEE-EEeC
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVIL-VGHS 95 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l-vG~S 95 (148)
.+.+|++--|..++...|...++.+.+.|-.=+++-.+|...-.+.+....++ ..+. .+++.. .-+|.+ -.||
T Consensus 131 ~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl----~~i~-~lk~~~-~~pV~~ds~Hs 204 (260)
T TIGR01361 131 QGKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDL----SAVP-VLKKET-HLPIIVDPSHA 204 (260)
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcCH----HHHH-HHHHhh-CCCEEEcCCCC
Confidence 45689999999999999999999988777633333334431110111111111 1222 333332 357888 7999
Q ss_pred hh
Q 032072 96 AG 97 (148)
Q Consensus 96 ~G 97 (148)
.|
T Consensus 205 ~G 206 (260)
T TIGR01361 205 AG 206 (260)
T ss_pred CC
Confidence 88
No 314
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=42.84 E-value=1.5e+02 Score=22.77 Aligned_cols=48 Identities=13% Similarity=0.233 Sum_probs=32.5
Q ss_pred hhhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhchh--hceeeEe
Q 032072 70 DDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNK--IRLAVYL 118 (148)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~--i~~~i~~ 118 (148)
++..+.+.++-+.+. +..+.+|--+|=|.-+...|..+.+. +.++|+.
T Consensus 198 e~Lm~El~~Ik~~~~-P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 198 EELMDELKEIKEVIN-PDETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred HHHHHHHHHHHhhcC-CCeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 344445555555555 56777777888888888888877663 6676663
No 315
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=42.08 E-value=24 Score=17.36 Aligned_cols=33 Identities=15% Similarity=0.167 Sum_probs=22.1
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHh
Q 032072 44 SGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSS 82 (148)
Q Consensus 44 ~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~ 82 (148)
.+|.+.++|++|.-. ...+.++..+.+.+.+..
T Consensus 12 ~~y~~~~pdlpg~~t------~G~t~eea~~~~~eal~~ 44 (48)
T PF03681_consen 12 GGYVAYFPDLPGCFT------QGDTLEEALENAKEALEL 44 (48)
T ss_dssp SSEEEEETTCCTCEE------EESSHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCccChhh------cCCCHHHHHHHHHHHHHH
Confidence 578888999987631 225667777777666654
No 316
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=41.97 E-value=1.3e+02 Score=21.81 Aligned_cols=70 Identities=16% Similarity=0.310 Sum_probs=41.7
Q ss_pred CeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCC--------CCCC-----CCCC-CCcchhhhHHHHHHHHHhcC
Q 032072 19 PHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGS--------GTDP-----SDAN-SIHSFDDYNKPLMDFMSSLT 84 (148)
Q Consensus 19 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~--------g~s~-----~~~~-~~~~~~~~~~~~~~~~~~~~ 84 (148)
|.|+|.-|.++ ..+.|.+.||.|+..|+.-- |..- -++. ...+.+...+.+.+.++...
T Consensus 253 Pmi~fakG~g~-------~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~fG 325 (359)
T KOG2872|consen 253 PMILFAKGSGG-------ALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDFG 325 (359)
T ss_pred ceEEEEcCcch-------HHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHhC
Confidence 67788777543 44567779999999997521 1110 0111 11344566677788888877
Q ss_pred CCCcEEEEEeC
Q 032072 85 DNEKVILVGHS 95 (148)
Q Consensus 85 ~~~~i~lvG~S 95 (148)
..+-|.=.||.
T Consensus 326 ~~ryI~NLGHG 336 (359)
T KOG2872|consen 326 KSRYIANLGHG 336 (359)
T ss_pred ccceEEecCCC
Confidence 44445556664
No 317
>KOG3062 consensus RNA polymerase II elongator associated protein [General function prediction only]
Probab=41.88 E-value=1.2e+02 Score=21.28 Aligned_cols=73 Identities=12% Similarity=0.201 Sum_probs=39.6
Q ss_pred eEEEEccCCCCccch--HHHHHHHHhCC--cEEEEEecCCCCCCCCCC-CCCcchhhhHHHHHHHHHhcCCCCcEEEE
Q 032072 20 HFVLVHGISGGAWCW--YKVRCLMENSG--YKVSCINLKGSGTDPSDA-NSIHSFDDYNKPLMDFMSSLTDNEKVILV 92 (148)
Q Consensus 20 ~vl~~hG~~~~~~~~--~~~~~~l~~~~--~~v~~~d~~g~g~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~lv 92 (148)
++|++.|+.++...- ..+.+.|.+.+ +.|..+|--..|...+.. .....-+.....+...+++-.....++++
T Consensus 2 pLVvi~G~P~SGKstrA~~L~~~l~~~~~K~~v~ii~deslg~~~ns~y~~s~~EK~lRg~L~S~v~R~Lsk~~iVI~ 79 (281)
T KOG3062|consen 2 PLVVICGLPCSGKSTRAVELREALKERGTKQSVRIIDDESLGIEKNSNYGDSQAEKALRGKLRSAVDRSLSKGDIVIV 79 (281)
T ss_pred CeEEEeCCCCCCchhHHHHHHHHHHhhcccceEEEechhhcCCCCcccccccHHHHHHHHHHHHHHHhhcccCcEEEE
Confidence 678888998776543 34667777655 467777766554433211 11122233444555555554324455444
No 318
>PRK13938 phosphoheptose isomerase; Provisional
Probab=41.63 E-value=85 Score=21.01 Aligned_cols=29 Identities=7% Similarity=0.240 Sum_probs=23.7
Q ss_pred HhcCCCCcEEEEEeChhHHHHHHHHHhhc
Q 032072 81 SSLTDNEKVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 81 ~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
+.+....+++++|.+-.+.++..++.+..
T Consensus 40 ~~l~~g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 40 AGYRAGARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred HHHHCCCEEEEEeCcHHHHHHHHHHHHcC
Confidence 33445789999999999999999998764
No 319
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=41.40 E-value=1.2e+02 Score=21.01 Aligned_cols=72 Identities=8% Similarity=0.097 Sum_probs=45.4
Q ss_pred CCCeEEEEccCCCCcc--chHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEe
Q 032072 17 QKPHFVLVHGISGGAW--CWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGH 94 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~--~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~ 94 (148)
+.|+||++.|+-++.. ..+.+...|...|+.|..+..|.. .+...--+-.+-+.++....+.+.=-
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt~------------eE~~~p~lwRfw~~lP~~G~i~IF~r 96 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPSD------------RERTQWYFQRYVQHLPAAGEIVLFDR 96 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCCH------------HHHcChHHHHHHHhCCCCCeEEEEeC
Confidence 4689999999976544 345667777767888887765421 11112234556666776677777766
Q ss_pred ChhHHH
Q 032072 95 SAGGLS 100 (148)
Q Consensus 95 S~Gg~~ 100 (148)
|.=+-+
T Consensus 97 SwY~~~ 102 (230)
T TIGR03707 97 SWYNRA 102 (230)
T ss_pred chhhhH
Confidence 654443
No 320
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=40.93 E-value=62 Score=17.64 Aligned_cols=30 Identities=13% Similarity=0.330 Sum_probs=16.9
Q ss_pred cEEEEEeChhHHHHHHHHHhhchhhceeeEecc
Q 032072 88 KVILVGHSAGGLSITQASHKFGNKIRLAVYLAA 120 (148)
Q Consensus 88 ~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~ 120 (148)
+++++| ||.+++.+|....+.-..+.++..
T Consensus 1 ~vvViG---gG~ig~E~A~~l~~~g~~vtli~~ 30 (80)
T PF00070_consen 1 RVVVIG---GGFIGIELAEALAELGKEVTLIER 30 (80)
T ss_dssp EEEEES---SSHHHHHHHHHHHHTTSEEEEEES
T ss_pred CEEEEC---cCHHHHHHHHHHHHhCcEEEEEec
Confidence 466776 556666666655444445555544
No 321
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=40.76 E-value=36 Score=17.31 Aligned_cols=26 Identities=8% Similarity=0.174 Sum_probs=21.4
Q ss_pred cchhhhHHHHHHHHHhcCCCCcEEEEE
Q 032072 67 HSFDDYNKPLMDFMSSLTDNEKVILVG 93 (148)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~i~lvG 93 (148)
...+.|..++...+..+. ...+.++|
T Consensus 6 w~PqSWM~DLrS~I~~~~-I~ql~ipG 31 (51)
T PF03490_consen 6 WHPQSWMSDLRSSIGEMA-ITQLFIPG 31 (51)
T ss_pred cCcHHHHHHHHHHHhcce-eeeEEecc
Confidence 677899999999998887 66777776
No 322
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=40.76 E-value=26 Score=21.31 Aligned_cols=34 Identities=12% Similarity=0.227 Sum_probs=24.3
Q ss_pred EEEEccCCCCccchHHHHHHHHhCCcEEEEEecC
Q 032072 21 FVLVHGISGGAWCWYKVRCLMENSGYKVSCINLK 54 (148)
Q Consensus 21 vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~ 54 (148)
++...|..|+-.-+..+++.|.+.|+.|...-.+
T Consensus 2 li~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 2 LIATGGTRGHVYPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETG
T ss_pred EEEEcCChhHHHHHHHHHHHHhccCCeEEEeecc
Confidence 4555666677777778899999999998755544
No 323
>PF02233 PNTB: NAD(P) transhydrogenase beta subunit; InterPro: IPR012136 NAD(P) transhydrogenase catalyses the transfer of reducing equivalents between NAD(H) and NADP(H), coupled to the translocation of protons across a membrane []. It is an integral membrane protein found in most organisms except for yeasts, plants and some bacterial species. In bacterial species it is located in the cytoplasmic membrane, while in mitochondria it is located in the inner membrane. Under most physiological conditions this enzyme synthesises NADPH, driven by consumption of the proton electrochemical gradient. The resulting NADPH is subsequently used for biosynthetic reactions or the reduction of glutathione. The global structure of this enzyme is similar in all organisms, consisting of three distinct domains, though the polypeptide composition can vary. Domain I binds NAD(+)/NADH, domain II is a hydrophobic membrane-spanning domain, and domain III binds NADP(+)/NADPH. Domain I is composed of two subdomains, both of which form a Rossman fold, while domain III consists of a single Rossman fold where the NADP(+) is flipped relative to the normal orientation of bound nucleotides within the Rossman fold [, , ]. Several residues within these domains are thought to make functionally important interdomain contacts for hydride transfer between these domains []. Proton translocation occurs through domain II and is thought to induce conformational changes which are transmitted across domain III to the site of hydride transfer between domains I and III. This entry represents the beta subunit found in bacterial two-subunit NADP(H) transhydrogenases. This subunit forms domain III and part of the transmembrane domain II. ; GO: 0008750 NAD(P)+ transhydrogenase (AB-specific) activity, 0050661 NADP binding, 0055114 oxidation-reduction process, 0016021 integral to membrane; PDB: 1PT9_A 1DJL_A 1U31_B 2BRU_C 1PTJ_C 1HZZ_C 2FRD_C 2FSV_C 1XLT_C 1U2G_C ....
Probab=40.19 E-value=19 Score=27.61 Aligned_cols=41 Identities=20% Similarity=0.176 Sum_probs=29.5
Q ss_pred CeEEEEccCCC----CccchHHHHHHHHhCCcEEEEEecCCCCCC
Q 032072 19 PHFVLVHGISG----GAWCWYKVRCLMENSGYKVSCINLKGSGTD 59 (148)
Q Consensus 19 ~~vl~~hG~~~----~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s 59 (148)
.-|++++|+|. ......++.+.|++.|..|-.--+|--|+=
T Consensus 308 ~~VvIVPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPVAGRM 352 (463)
T PF02233_consen 308 KKVVIVPGYGMAVAQAQHAVAELADLLEERGVEVKFAIHPVAGRM 352 (463)
T ss_dssp SEEEEEESHHHHHCTTHHHHHHHHHHHHHTT-EEEEEE-TTSSSS
T ss_pred CceEEecCchHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCC
Confidence 47999999985 333456788999999999987777766653
No 324
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=39.86 E-value=30 Score=25.01 Aligned_cols=19 Identities=26% Similarity=0.354 Sum_probs=16.2
Q ss_pred EEEEeChhHHHHHHHHHhh
Q 032072 90 ILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 90 ~lvG~S~Gg~~a~~~~~~~ 108 (148)
.+.|-|.||.++..++...
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 5889999999999998743
No 325
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=39.73 E-value=73 Score=20.58 Aligned_cols=33 Identities=12% Similarity=0.293 Sum_probs=22.7
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhh
Q 032072 76 LMDFMSSLTDNEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 76 ~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
+.++++.+...++|+++|...-+.++..+..+.
T Consensus 20 ~~~~~~~l~~a~~I~i~G~G~S~~~A~~~~~~l 52 (179)
T TIGR03127 20 LDKLADKIIKAKRIFVAGAGRSGLVGKAFAMRL 52 (179)
T ss_pred HHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHH
Confidence 444444444467999999887777777776655
No 326
>PRK09936 hypothetical protein; Provisional
Probab=39.54 E-value=1.4e+02 Score=21.54 Aligned_cols=55 Identities=5% Similarity=0.056 Sum_probs=36.9
Q ss_pred EEccCCC----CccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHh
Q 032072 23 LVHGISG----GAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSS 82 (148)
Q Consensus 23 ~~hG~~~----~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~ 82 (148)
|...... +..+|..+.+.+...|++.+++.+.++|.++- ...+-+..+..+...+
T Consensus 25 F~Qp~n~d~~~~~~qWq~~~~~~~~~G~~tLivQWt~yG~~~f-----g~~~g~La~~l~~A~~ 83 (296)
T PRK09936 25 FYQPQNRDSQVTDTQWQGLWSQLRLQGFDTLVVQWTRYGDADF-----GGQRGWLAKRLAAAQQ 83 (296)
T ss_pred eeccccccCCCCHHHHHHHHHHHHHcCCcEEEEEeeeccCCCc-----ccchHHHHHHHHHHHH
Confidence 4544443 45678889999999999999999999987632 1224445554444444
No 327
>cd05007 SIS_Etherase N-acetylmuramic acid 6-phosphate etherase. Members of this family contain the SIS (Sugar ISomerase) domain. The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. The bacterial cell wall sugar N-acetylmuramic acid carries a unique D-lactyl ether substituent at the C3 position. The etherase catalyzes the cleavage of the lactyl ether bond of N-acetylmuramic acid 6-phosphate.
Probab=39.36 E-value=77 Score=22.17 Aligned_cols=39 Identities=13% Similarity=0.164 Sum_probs=26.0
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhc
Q 032072 71 DYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
...+.+....+.+....+++++|..--|.++..-+...+
T Consensus 34 ~I~~av~~~~~~l~~ggrl~~~GaGtSg~la~~da~e~~ 72 (257)
T cd05007 34 QIARAVDAAAERLRAGGRLIYVGAGTSGRLGVLDASELP 72 (257)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEcCcHHHHHHHHHHHhcc
Confidence 334444455555555789999999888888866555443
No 328
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=38.72 E-value=46 Score=24.13 Aligned_cols=22 Identities=27% Similarity=0.303 Sum_probs=17.7
Q ss_pred CCCcEEEEEeChhHHHHHHHHH
Q 032072 85 DNEKVILVGHSAGGLSITQASH 106 (148)
Q Consensus 85 ~~~~i~lvG~S~Gg~~a~~~~~ 106 (148)
...+.++.|||+|=+.++.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 3677899999999887777654
No 329
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=38.28 E-value=1.1e+02 Score=21.75 Aligned_cols=35 Identities=17% Similarity=0.278 Sum_probs=25.5
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhch
Q 032072 76 LMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGN 110 (148)
Q Consensus 76 ~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~ 110 (148)
+.+.++.+...++|+++|...-+.++..+..++..
T Consensus 120 l~~av~~L~~A~rI~~~G~g~S~~vA~~~~~~l~~ 154 (281)
T COG1737 120 LERAVELLAKARRIYFFGLGSSGLVASDLAYKLMR 154 (281)
T ss_pred HHHHHHHHHcCCeEEEEEechhHHHHHHHHHHHHH
Confidence 34444445556789999988888888888887754
No 330
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=37.60 E-value=36 Score=23.65 Aligned_cols=22 Identities=23% Similarity=0.206 Sum_probs=18.0
Q ss_pred cEEEEEeChhHHHHHHHHHhhc
Q 032072 88 KVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 88 ~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
-=.++|-|.|+.++..++....
T Consensus 28 fd~i~GtSaGAi~a~~~~~g~~ 49 (266)
T cd07208 28 FDLVIGVSAGALNAASYLSGQR 49 (266)
T ss_pred CCEEEEECHHHHhHHHHHhCCc
Confidence 3378899999999999887554
No 331
>PRK04148 hypothetical protein; Provisional
Probab=37.43 E-value=98 Score=19.44 Aligned_cols=21 Identities=14% Similarity=0.061 Sum_probs=17.1
Q ss_pred CCcEEEEEeChhHHHHHHHHH
Q 032072 86 NEKVILVGHSAGGLSITQASH 106 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~ 106 (148)
..++..+|-..|..++..++.
T Consensus 17 ~~kileIG~GfG~~vA~~L~~ 37 (134)
T PRK04148 17 NKKIVELGIGFYFKVAKKLKE 37 (134)
T ss_pred CCEEEEEEecCCHHHHHHHHH
Confidence 467999999988888887774
No 332
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=37.00 E-value=78 Score=22.47 Aligned_cols=63 Identities=14% Similarity=0.245 Sum_probs=28.5
Q ss_pred HHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCC-CCcEEEEEeChhHHHH
Q 032072 37 VRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTD-NEKVILVGHSAGGLSI 101 (148)
Q Consensus 37 ~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~lvG~S~Gg~~a 101 (148)
.++.+.+.|..++++.+--....+.......+.++.++.+.++.+.... .+.++++.| ||.++
T Consensus 162 ~A~~M~~AGaDiiv~H~GlT~gG~~Ga~~~~sl~~a~~~~~~i~~aa~~v~~dii~l~h--GGPI~ 225 (268)
T PF09370_consen 162 QARAMAEAGADIIVAHMGLTTGGSIGAKTALSLEEAAERIQEIFDAARAVNPDIIVLCH--GGPIA 225 (268)
T ss_dssp HHHHHHHHT-SEEEEE-SS----------S--HHHHHHHHHHHHHHHHCC-TT-EEEEE--CTTB-
T ss_pred HHHHHHHcCCCEEEecCCccCCCCcCccccCCHHHHHHHHHHHHHHHHHhCCCeEEEEe--CCCCC
Confidence 3555666788888887543211111111235677777666666654421 245677766 77654
No 333
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=36.55 E-value=90 Score=20.02 Aligned_cols=22 Identities=23% Similarity=0.240 Sum_probs=17.9
Q ss_pred CcEEEEEeChhHHHHHHHHHhh
Q 032072 87 EKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 87 ~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
..=.++|-|.|+.++..++...
T Consensus 28 ~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 28 PIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred CeeEEEEECHHHHHHHHHHcCC
Confidence 3457899999999999998643
No 334
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.08 E-value=69 Score=23.16 Aligned_cols=34 Identities=9% Similarity=0.203 Sum_probs=24.4
Q ss_pred HHHHHHHHhcC---CCCcEEEEEeC--hhHHHHHHHHHh
Q 032072 74 KPLMDFMSSLT---DNEKVILVGHS--AGGLSITQASHK 107 (148)
Q Consensus 74 ~~~~~~~~~~~---~~~~i~lvG~S--~Gg~~a~~~~~~ 107 (148)
..+.++++... ...++.++|.| ||..++..+...
T Consensus 144 ~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 144 SGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 34555555542 25789999997 999999988753
No 335
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=35.99 E-value=1.7e+02 Score=24.00 Aligned_cols=79 Identities=10% Similarity=0.196 Sum_probs=47.9
Q ss_pred CCCCeEEEEccCCCC----------ccchHHHHHHHHhCCcEEEEEecC----CCCCCCCCCC----CCcchhhhHHHHH
Q 032072 16 VQKPHFVLVHGISGG----------AWCWYKVRCLMENSGYKVSCINLK----GSGTDPSDAN----SIHSFDDYNKPLM 77 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~----------~~~~~~~~~~l~~~~~~v~~~d~~----g~g~s~~~~~----~~~~~~~~~~~~~ 77 (148)
+++.+||+.|..... ...+....+.|.++||+++..+-- ..+...+... .+....+..+.+.
T Consensus 46 ~~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny~~Al 125 (672)
T PRK14581 46 KNTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFYRRVY 125 (672)
T ss_pred CCceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchHHHHH
Confidence 356788999988532 234666788888899999988622 1111111111 2234445666777
Q ss_pred HHHHhcCCCCcEEEEEe
Q 032072 78 DFMSSLTDNEKVILVGH 94 (148)
Q Consensus 78 ~~~~~~~~~~~i~lvG~ 94 (148)
.++++..-.-.+.++|.
T Consensus 126 PILKkyg~pATfFvVg~ 142 (672)
T PRK14581 126 PLLKAYKWSAVLAPVGT 142 (672)
T ss_pred HHHHHcCCCEEEEEech
Confidence 78888763445666664
No 336
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=35.89 E-value=1.2e+02 Score=19.57 Aligned_cols=33 Identities=15% Similarity=0.388 Sum_probs=22.2
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhh
Q 032072 76 LMDFMSSLTDNEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 76 ~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
+.++++.+...++|+++|....+.++..+..+.
T Consensus 23 l~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l 55 (179)
T cd05005 23 LDKLISAILNAKRIFVYGAGRSGLVAKAFAMRL 55 (179)
T ss_pred HHHHHHHHHhCCeEEEEecChhHHHHHHHHHHH
Confidence 444444444457999999877777777776655
No 337
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=35.30 E-value=1.4e+02 Score=20.18 Aligned_cols=27 Identities=19% Similarity=0.417 Sum_probs=17.9
Q ss_pred cchhhhHHHHHHHHHhcCCCCcEEEEEe
Q 032072 67 HSFDDYNKPLMDFMSSLTDNEKVILVGH 94 (148)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~i~lvG~ 94 (148)
.+-+++-+++.+.++... .+=+++-|+
T Consensus 62 ~~r~~~d~~l~~~l~~~~-~dlvvLAGy 88 (200)
T COG0299 62 PSREAFDRALVEALDEYG-PDLVVLAGY 88 (200)
T ss_pred CCHHHHHHHHHHHHHhcC-CCEEEEcch
Confidence 345667777888887776 556666653
No 338
>PRK07053 glutamine amidotransferase; Provisional
Probab=34.91 E-value=1.5e+02 Score=20.38 Aligned_cols=34 Identities=15% Similarity=0.205 Sum_probs=22.9
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHH
Q 032072 71 DYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQAS 105 (148)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~ 105 (148)
.+...+.++++... ...+-++|.|+|..+...++
T Consensus 67 p~~~~~~~~i~~~~-~~~~PvlGIC~G~Qlla~al 100 (234)
T PRK07053 67 PFLAPEIALLRQRL-AAGLPTLGICLGAQLIARAL 100 (234)
T ss_pred CcHHHHHHHHHHHH-HCCCCEEEECccHHHHHHHc
Confidence 35556666666553 23455889999998887775
No 339
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=34.75 E-value=1.8e+02 Score=22.03 Aligned_cols=57 Identities=9% Similarity=0.036 Sum_probs=32.0
Q ss_pred HHHHHHh--CCcEEEEEecCCCCCCCCCCCCCcchh-hhHHHHHHHHHhcCCCCcEEEEEeChh
Q 032072 37 VRCLMEN--SGYKVSCINLKGSGTDPSDANSIHSFD-DYNKPLMDFMSSLTDNEKVILVGHSAG 97 (148)
Q Consensus 37 ~~~~l~~--~~~~v~~~d~~g~g~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~lvG~S~G 97 (148)
+.+.+.+ ..|.++++|.|.++.+.... .+.. ++.+.+...++-+. ..-+.++.-+..
T Consensus 280 ~l~~~~~~g~~fDlIilDPPsF~r~k~~~---~~~~rdy~~l~~~~~~iL~-pgG~l~~~s~~~ 339 (393)
T COG1092 280 WLRKAERRGEKFDLIILDPPSFARSKKQE---FSAQRDYKDLNDLALRLLA-PGGTLVTSSCSR 339 (393)
T ss_pred HHHHHHhcCCcccEEEECCcccccCcccc---hhHHHHHHHHHHHHHHHcC-CCCEEEEEecCC
Confidence 3444443 36999999999998876543 3433 33333444444444 344444444444
No 340
>PRK05441 murQ N-acetylmuramic acid-6-phosphate etherase; Reviewed
Probab=34.26 E-value=97 Score=22.27 Aligned_cols=34 Identities=12% Similarity=0.185 Sum_probs=23.2
Q ss_pred HHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHh
Q 032072 74 KPLMDFMSSLTDNEKVILVGHSAGGLSITQASHK 107 (148)
Q Consensus 74 ~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~ 107 (148)
+.+..+.+.+....+++++|...-|.++...+..
T Consensus 50 ~av~~~~~~l~~ggrI~~~GaGtSg~la~~da~e 83 (299)
T PRK05441 50 AAVDAAAAALRQGGRLIYIGAGTSGRLGVLDASE 83 (299)
T ss_pred HHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHh
Confidence 3344444555557899999999889888555553
No 341
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=34.04 E-value=1.4e+02 Score=20.47 Aligned_cols=48 Identities=10% Similarity=0.245 Sum_probs=23.3
Q ss_pred hHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEE
Q 032072 34 WYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILV 92 (148)
Q Consensus 34 ~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lv 92 (148)
++.+++.|.+.|+.|..+..... .+.....+.+...++... .+.+.++
T Consensus 51 MRhfa~~L~~~G~~V~Y~~~~~~----------~~~~s~~~~L~~~~~~~~-~~~~~~~ 98 (224)
T PF04244_consen 51 MRHFADELRAKGFRVHYIELDDP----------ENTQSFEDALARALKQHG-IDRLHVM 98 (224)
T ss_dssp HHHHHHHHHHTT--EEEE-TT-T----------T--SSHHHHHHHHHHHH-----EEEE
T ss_pred HHHHHHHHHhCCCEEEEEeCCCc----------cccccHHHHHHHHHHHcC-CCEEEEE
Confidence 45578889899999998886521 122234445555555544 4444444
No 342
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=33.69 E-value=2.2e+02 Score=21.86 Aligned_cols=64 Identities=9% Similarity=0.267 Sum_probs=35.0
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhch--hhceeeE
Q 032072 44 SGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGN--KIRLAVY 117 (148)
Q Consensus 44 ~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~--~i~~~i~ 117 (148)
.++.++.+|.+|... .-....+.+..+.+... ...+++|--++-|.-+...+..+.+ .+.++|+
T Consensus 181 ~~~DvViIDTaGr~~---------~d~~lm~El~~i~~~~~-p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~Il 246 (429)
T TIGR01425 181 ENFDIIIVDTSGRHK---------QEDSLFEEMLQVAEAIQ-PDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVII 246 (429)
T ss_pred CCCCEEEEECCCCCc---------chHHHHHHHHHHhhhcC-CcEEEEEeccccChhHHHHHHHHHhccCCcEEEE
Confidence 467788888776422 12334455555554444 3455555556656555655555533 3555555
No 343
>PF06415 iPGM_N: BPG-independent PGAM N-terminus (iPGM_N); InterPro: IPR011258 This family represents the N-terminal region of the 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (or phosphoglyceromutase or BPG-independent PGAM) protein (5.4.2.1 from EC). The family is found in conjunction with Metalloenzyme (located in the C-terminal region of the protein). ; GO: 0004619 phosphoglycerate mutase activity, 0030145 manganese ion binding, 0006007 glucose catabolic process, 0005737 cytoplasm; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3IGZ_B 3IGY_B 3NVL_A 2IFY_A.
Probab=33.68 E-value=1.6e+02 Score=20.31 Aligned_cols=64 Identities=17% Similarity=0.197 Sum_probs=34.8
Q ss_pred cCCCCccchHHHHHHHHhCCcE-EEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEe
Q 032072 26 GISGGAWCWYKVRCLMENSGYK-VSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGH 94 (148)
Q Consensus 26 G~~~~~~~~~~~~~~l~~~~~~-v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~ 94 (148)
|..++..++..+++.+.+.|.. |++.-.- -|+-+ .+.+.....+.+.+.+.+....+-..+.|.
T Consensus 40 GVHSh~~Hl~al~~~a~~~gv~~V~vH~f~-DGRDt----~P~S~~~yl~~l~~~l~~~~~g~IAsv~GR 104 (223)
T PF06415_consen 40 GVHSHIDHLFALIKLAKKQGVKKVYVHAFT-DGRDT----PPKSALKYLEELEEKLAEIGIGRIASVSGR 104 (223)
T ss_dssp SSS--HHHHHHHHHHHHHTT-SEEEEEEEE--SSSS-----TTTHHHHHHHHHHHHHHHTCTEEEEEEEC
T ss_pred CccccHHHHHHHHHHHHHcCCCEEEEEEec-CCCCC----CcchHHHHHHHHHHHHHhhCCceEEEEece
Confidence 3345556677788888888854 5333211 12222 225777888888888888752333445553
No 344
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=33.37 E-value=1e+02 Score=24.71 Aligned_cols=101 Identities=16% Similarity=0.164 Sum_probs=52.3
Q ss_pred CCCeEEEEccCCCCccchHHHHHH--------HHhCCcEEEEEecC----CCCCCCCCCC--CCcchhhhHHHHHHHHHh
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCL--------MENSGYKVSCINLK----GSGTDPSDAN--SIHSFDDYNKPLMDFMSS 82 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~--------l~~~~~~v~~~d~~----g~g~s~~~~~--~~~~~~~~~~~~~~~~~~ 82 (148)
..-++-+--|.+-.......+.+. +.+-|=.|+.-..- .+|..+.... ...........+.+.+.+
T Consensus 257 ~~ipLTLSiGvg~g~~~~~elg~vA~~~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~~ekrTRvRaRvis~al~d~i~e 336 (655)
T COG3887 257 KNIPLTLSIGVGYGENNLIELGEVAQSNLDLALGRGGDQVVIKENNGKVRFYGGKSNPMEKRTRVRARVISTALSDIIKE 336 (655)
T ss_pred cCcceEEEEEeccCcccHHHHHHHHHHhHHHHhccCCceEEEEcCCCceeeeCCCcchhHHhHHHHHHHHHHHHHHHHhh
Confidence 345666666766554444443221 22234445544322 2343332221 112333444445555544
Q ss_pred cCCCCcEEEEEe------ChhHHHHHHHHHhhchhhceeeEeccc
Q 032072 83 LTDNEKVILVGH------SAGGLSITQASHKFGNKIRLAVYLAAT 121 (148)
Q Consensus 83 ~~~~~~i~lvG~------S~Gg~~a~~~~~~~~~~i~~~i~~~~~ 121 (148)
.++|+++|| +.|+.+++........+ .+-+.+++.
T Consensus 337 ---~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 337 ---SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred ---cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 579999999 67888887766544443 555666653
No 345
>COG0813 DeoD Purine-nucleoside phosphorylase [Nucleotide transport and metabolism]
Probab=33.34 E-value=66 Score=22.21 Aligned_cols=36 Identities=19% Similarity=0.304 Sum_probs=22.7
Q ss_pred CCcEEEEEeChhHHHHHHHHHhhch--hhceeeEeccc
Q 032072 86 NEKVILVGHSAGGLSITQASHKFGN--KIRLAVYLAAT 121 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~~~--~i~~~i~~~~~ 121 (148)
.+++.++||.||-.-...|+...-. .++.+|-+++.
T Consensus 55 Gk~iSvmg~GmGipS~sIY~~ELi~~y~Vk~iIRvGt~ 92 (236)
T COG0813 55 GKKISVMGHGMGIPSISIYSRELITDYGVKKIIRVGTC 92 (236)
T ss_pred CcEEEEEEecCCCccHHHHHHHHHHHhCcceEEEEEcc
Confidence 6889999999995544444443211 36666666553
No 346
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=33.23 E-value=1.4e+02 Score=19.40 Aligned_cols=55 Identities=13% Similarity=0.036 Sum_probs=37.0
Q ss_pred CccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCC------CCcchhhhHHHHHHHHHhcC
Q 032072 30 GAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDAN------SIHSFDDYNKPLMDFMSSLT 84 (148)
Q Consensus 30 ~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~------~~~~~~~~~~~~~~~~~~~~ 84 (148)
+..+|....+.+.+.|++.+++..-+++.....+. ......+.++.+.+..++..
T Consensus 18 ~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~G 78 (166)
T PF14488_consen 18 TPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYG 78 (166)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcC
Confidence 45678888999999999988888777654332211 11244567777777777764
No 347
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=33.22 E-value=2.3e+02 Score=21.85 Aligned_cols=64 Identities=11% Similarity=0.155 Sum_probs=36.4
Q ss_pred CcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhch-hhceeeE
Q 032072 45 GYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGN-KIRLAVY 117 (148)
Q Consensus 45 ~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~-~i~~~i~ 117 (148)
++.++.+|.+|... .-.+..+.+.++++...+...+.++.-+.++.-+...+..+.. .+.++|+
T Consensus 320 ~~DvVLIDTaGRs~---------kd~~lm~EL~~~lk~~~PdevlLVLsATtk~~d~~~i~~~F~~~~idglI~ 384 (436)
T PRK11889 320 RVDYILIDTAGKNY---------RASETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVF 384 (436)
T ss_pred CCCEEEEeCccccC---------cCHHHHHHHHHHHhhcCCCeEEEEECCccChHHHHHHHHHhcCCCCCEEEE
Confidence 68899999887632 1123344455566554433334444444566666666665543 4666666
No 348
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=33.10 E-value=82 Score=22.75 Aligned_cols=21 Identities=19% Similarity=0.273 Sum_probs=17.1
Q ss_pred CcEEEEEeChhHHHHHHHHHh
Q 032072 87 EKVILVGHSAGGLSITQASHK 107 (148)
Q Consensus 87 ~~i~lvG~S~Gg~~a~~~~~~ 107 (148)
..-++.|-|.|+.++..++..
T Consensus 97 ~~~~i~GtSaGAi~aa~~~~~ 117 (298)
T cd07206 97 LPRVISGSSAGAIVAALLGTH 117 (298)
T ss_pred CCCEEEEEcHHHHHHHHHHcC
Confidence 344689999999999998863
No 349
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=32.51 E-value=1.7e+02 Score=20.25 Aligned_cols=88 Identities=14% Similarity=0.025 Sum_probs=44.3
Q ss_pred CCCeEEEEccCCC--CccchH-HHHHHHHhCCcEEEEEecCCCCCC-CCCCC-----CC--cchhhhHH--HHHHHHHhc
Q 032072 17 QKPHFVLVHGISG--GAWCWY-KVRCLMENSGYKVSCINLKGSGTD-PSDAN-----SI--HSFDDYNK--PLMDFMSSL 83 (148)
Q Consensus 17 ~~~~vl~~hG~~~--~~~~~~-~~~~~l~~~~~~v~~~d~~g~g~s-~~~~~-----~~--~~~~~~~~--~~~~~~~~~ 83 (148)
.++.|+|++-... ....|. .+.+.+.+.|+.+..++....-.. -...+ .. ..+-+..+ .+.+.+++.
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~ 109 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREA 109 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHH
Confidence 4577899987663 334443 355667778988877765421000 00000 00 11111111 122333332
Q ss_pred CCCCcEEEEEeChhHHHHHHHH
Q 032072 84 TDNEKVILVGHSAGGLSITQAS 105 (148)
Q Consensus 84 ~~~~~i~lvG~S~Gg~~a~~~~ 105 (148)
- ..-..++|.|.|+.++..-.
T Consensus 110 ~-~~G~~~~G~SAGAii~~~~i 130 (233)
T PRK05282 110 V-KNGTPYIGWSAGANVAGPTI 130 (233)
T ss_pred H-HCCCEEEEECHHHHhhhccc
Confidence 2 23477999999998866543
No 350
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=32.43 E-value=1.9e+02 Score=20.75 Aligned_cols=89 Identities=19% Similarity=0.092 Sum_probs=45.6
Q ss_pred CCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChh
Q 032072 18 KPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAG 97 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~G 97 (148)
+-.|++-.|+... .-..+.+...+.|.+++.|+..|.-....... .++. ..+....++.++.+|-+
T Consensus 89 k~avIis~Gf~e~--~~~~l~~~a~~~girilGPNc~Giin~~~~~~--~~~~----------~~~~~~G~ValiSQSG~ 154 (286)
T TIGR01019 89 ELIVCITEGIPVH--DMLKVKRYMEESGTRLIGPNCPGIITPGECKI--GIMP----------GHIHKPGNVGIVSRSGT 154 (286)
T ss_pred CEEEEECCCCCHH--HHHHHHHHHHHcCCEEECCCCceEEcccccce--eecc----------ccCCCCCcEEEEeccHH
Confidence 3456666676433 12345566667899999999887632211110 0110 00122467888876655
Q ss_pred H-HHHHHHHHhhchhhceeeEecc
Q 032072 98 G-LSITQASHKFGNKIRLAVYLAA 120 (148)
Q Consensus 98 g-~~a~~~~~~~~~~i~~~i~~~~ 120 (148)
- ...+..+....-.+..++.++.
T Consensus 155 l~~~~~~~a~~~giG~S~~Vs~Gn 178 (286)
T TIGR01019 155 LTYEAVHQLTKAGFGQSTCVGIGG 178 (286)
T ss_pred HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 2 2223334444434566665553
No 351
>COG1598 Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=32.38 E-value=91 Score=17.05 Aligned_cols=33 Identities=18% Similarity=0.329 Sum_probs=20.1
Q ss_pred HhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHH
Q 032072 42 ENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFM 80 (148)
Q Consensus 42 ~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~ 80 (148)
.+.+|.+.++|++|+-.- ..+.++..+.+.+.+
T Consensus 12 ~dg~y~~~~Pdlpgc~s~------G~T~eea~~n~~eai 44 (73)
T COG1598 12 EDGGYVASVPDLPGCHSQ------GETLEEALQNAKEAI 44 (73)
T ss_pred CCCCEEEEeCCCCCcccc------CCCHHHHHHHHHHHH
Confidence 346788999999987431 144555555444443
No 352
>PRK03482 phosphoglycerate mutase; Provisional
Probab=32.30 E-value=1.6e+02 Score=19.70 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=22.6
Q ss_pred cchhhhHHHHHHHHHhcC---CCCcEEEEEeChhHHHHHHH
Q 032072 67 HSFDDYNKPLMDFMSSLT---DNEKVILVGHSAGGLSITQA 104 (148)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~---~~~~i~lvG~S~Gg~~a~~~ 104 (148)
.+..+..+++..+++.+. ..+++.+|+| |+.+...+
T Consensus 120 Es~~~~~~Rv~~~l~~~~~~~~~~~vliVsH--g~~i~~l~ 158 (215)
T PRK03482 120 ESMQELSDRMHAALESCLELPQGSRPLLVSH--GIALGCLV 158 (215)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCeEEEEeC--cHHHHHHH
Confidence 566777777777776652 2356888887 45444433
No 353
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=32.29 E-value=52 Score=20.83 Aligned_cols=21 Identities=24% Similarity=0.273 Sum_probs=16.4
Q ss_pred CcEEEEEeChhHHHHHHHHHh
Q 032072 87 EKVILVGHSAGGLSITQASHK 107 (148)
Q Consensus 87 ~~i~lvG~S~Gg~~a~~~~~~ 107 (148)
.--.+.|-|.||.++..++..
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC
T ss_pred CccEEEEcChhhhhHHHHHhC
Confidence 445688999999999877764
No 354
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=32.03 E-value=1e+02 Score=22.39 Aligned_cols=35 Identities=23% Similarity=0.384 Sum_probs=24.6
Q ss_pred CCeEEEEcc-CCCC-----ccchHHHHHHHHhCCcEEEEEe
Q 032072 18 KPHFVLVHG-ISGG-----AWCWYKVRCLMENSGYKVSCIN 52 (148)
Q Consensus 18 ~~~vl~~hG-~~~~-----~~~~~~~~~~l~~~~~~v~~~d 52 (148)
++.|++.|| ..+. .+.|..+++.+.+.++.|+.+-
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g 215 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFG 215 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 578888898 4433 3356778889988887776653
No 355
>KOG3086 consensus Predicted dioxygenase [General function prediction only]
Probab=32.02 E-value=1.7e+02 Score=20.73 Aligned_cols=56 Identities=14% Similarity=0.122 Sum_probs=39.3
Q ss_pred cchhhhHHHHHHHHHhcCC---CCcEEEE---EeChhHH-HHHHHHHhhchhhceeeEecccc
Q 032072 67 HSFDDYNKPLMDFMSSLTD---NEKVILV---GHSAGGL-SITQASHKFGNKIRLAVYLAATM 122 (148)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~---~~~i~lv---G~S~Gg~-~a~~~~~~~~~~i~~~i~~~~~~ 122 (148)
.+..+..++++.++..... .-|.++. |+++-|- .+..+.+..|..++++++++|..
T Consensus 17 ~~~~~Ls~QL~~wL~~~~~~~~paRaiIaPHAGY~YcG~~Aa~ay~qvdps~v~RIFILGPSH 79 (296)
T KOG3086|consen 17 ASGPQLSAQLEGWLSQVTLTKGPARAIIAPHAGYTYCGSCAAYAYKQVDPSNVQRIFILGPSH 79 (296)
T ss_pred CCHHHHHHHHHHHHhccCCCCCCceEEEcCCCCcccchHHHHHHHhhcChhHeeEEEEecCcc
Confidence 4567778888888887642 2244443 7887664 55556667788999999999866
No 356
>TIGR03586 PseI pseudaminic acid synthase.
Probab=31.83 E-value=2.1e+02 Score=21.03 Aligned_cols=79 Identities=15% Similarity=0.095 Sum_probs=45.5
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHHhCCc-EEEEEec-CCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEe
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGY-KVSCINL-KGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGH 94 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~-~v~~~d~-~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~ 94 (148)
.+.+|++--|. ++...|....+.+.+.|. .++.... ..+ . ...++.--.....+++.. .-+|.+..|
T Consensus 133 ~gkPvilstG~-~t~~Ei~~Av~~i~~~g~~~i~LlhC~s~Y-P--------~~~~~~nL~~i~~lk~~f-~~pVG~SDH 201 (327)
T TIGR03586 133 TGKPIIMSTGI-ATLEEIQEAVEACREAGCKDLVLLKCTSSY-P--------APLEDANLRTIPDLAERF-NVPVGLSDH 201 (327)
T ss_pred cCCcEEEECCC-CCHHHHHHHHHHHHHCCCCcEEEEecCCCC-C--------CCcccCCHHHHHHHHHHh-CCCEEeeCC
Confidence 45688888888 578888888888876665 3443332 222 1 111122112222444433 357878899
Q ss_pred ChhHHHHHHHHH
Q 032072 95 SAGGLSITQASH 106 (148)
Q Consensus 95 S~Gg~~a~~~~~ 106 (148)
+.|-.++.....
T Consensus 202 t~G~~~~~aAva 213 (327)
T TIGR03586 202 TLGILAPVAAVA 213 (327)
T ss_pred CCchHHHHHHHH
Confidence 999665555443
No 357
>PF07302 AroM: AroM protein; InterPro: IPR010843 This family consists of several bacterial and archaeal AroM proteins. In Escherichia coli the aroM gene is cotranscribed with aroL []. The function of this family is unknown.
Probab=31.36 E-value=1.5e+02 Score=20.48 Aligned_cols=40 Identities=8% Similarity=-0.018 Sum_probs=30.6
Q ss_pred CCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCC
Q 032072 18 KPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSG 57 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g 57 (148)
.+.+.....+.++...+...++.|.+.|..+++.|+-||.
T Consensus 151 ~~~~a~asPy~~~~~~l~~Aa~~L~~~gadlIvLDCmGYt 190 (221)
T PF07302_consen 151 PVVVAAASPYEGDEEELAAAARELAEQGADLIVLDCMGYT 190 (221)
T ss_pred CeEEEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 3445555566667777778888999899999999998874
No 358
>PRK12570 N-acetylmuramic acid-6-phosphate etherase; Reviewed
Probab=31.30 E-value=1.6e+02 Score=21.23 Aligned_cols=33 Identities=9% Similarity=0.212 Sum_probs=21.3
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhh
Q 032072 76 LMDFMSSLTDNEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 76 ~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
+..+.+.+....+++++|..-.|.++..-+...
T Consensus 48 ~~~~~~~l~~ggrl~~~GaG~Sg~la~~dA~e~ 80 (296)
T PRK12570 48 VDKIVAAFKKGGRLIYMGAGTSGRLGVLDASEC 80 (296)
T ss_pred HHHHHHHHHcCCeEEEECCchhHHHHHHHHHhC
Confidence 334444555568999999887777755555543
No 359
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=31.20 E-value=1.2e+02 Score=20.37 Aligned_cols=23 Identities=17% Similarity=0.189 Sum_probs=13.3
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHH
Q 032072 76 LMDFMSSLTDNEKVILVGHSAGGL 99 (148)
Q Consensus 76 ~~~~~~~~~~~~~i~lvG~S~Gg~ 99 (148)
+++.++... .-..+++-||+||.
T Consensus 114 ir~~~e~~d-~~~~~~i~~slgGG 136 (216)
T PF00091_consen 114 IRKEIEKCD-SLDGFFIVHSLGGG 136 (216)
T ss_dssp HHHHHHTST-TESEEEEEEESSSS
T ss_pred cchhhcccc-ccccceecccccce
Confidence 344443333 45677777888865
No 360
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=30.92 E-value=1.3e+02 Score=18.53 Aligned_cols=33 Identities=9% Similarity=0.269 Sum_probs=20.7
Q ss_pred HHHHhcCCCCcEEEEEeChhHHHHHHHHHhhch
Q 032072 78 DFMSSLTDNEKVILVGHSAGGLSITQASHKFGN 110 (148)
Q Consensus 78 ~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~ 110 (148)
.+.+.+....+++++|-.--+.++.+++.+...
T Consensus 27 ~i~~~~~~gg~i~~~G~G~S~~~a~~~~~~~~~ 59 (138)
T PF13580_consen 27 LIAEALRNGGRIFVCGNGHSAAIASHFAADLGG 59 (138)
T ss_dssp HHHHHHHTT--EEEEESTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCCEEEEEcCchhhhHHHHHHHHHhc
Confidence 333444447899999977667788888776653
No 361
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=30.83 E-value=1e+02 Score=21.17 Aligned_cols=22 Identities=27% Similarity=0.377 Sum_probs=18.1
Q ss_pred cEEEEEeChhHHHHHHHHHhhc
Q 032072 88 KVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 88 ~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
.-.+.|-|.|+.++..++....
T Consensus 30 ~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 30 TTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred CCEEEEEcHHHHHHHHHHcCCC
Confidence 4478999999999999988543
No 362
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=30.59 E-value=1.4e+02 Score=19.28 Aligned_cols=34 Identities=21% Similarity=0.355 Sum_probs=20.6
Q ss_pred HHHHHHHHhcC---CCCcEEEEEeC--hhHHHHHHHHHh
Q 032072 74 KPLMDFMSSLT---DNEKVILVGHS--AGGLSITQASHK 107 (148)
Q Consensus 74 ~~~~~~~~~~~---~~~~i~lvG~S--~Gg~~a~~~~~~ 107 (148)
+.+.++++... ..+++.++|.| .|-.++..+..+
T Consensus 21 ~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 21 LAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp HHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC
Confidence 34444444432 26799999999 477777777664
No 363
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=30.43 E-value=1.5e+02 Score=20.75 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=26.5
Q ss_pred CeEEEEccCCCCccchHHHHHHHHhCCcEEEEEe
Q 032072 19 PHFVLVHGISGGAWCWYKVRCLMENSGYKVSCIN 52 (148)
Q Consensus 19 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d 52 (148)
..|+++-|-|.+..+=.-.++.|...|+.|.++-
T Consensus 61 ~~V~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 61 PRVLLVCGPGNNGGDGLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred CeEEEEECCCCCchhHHHHHHHHHHCCCeEEEEE
Confidence 4577888888777766678899988899887665
No 364
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=30.23 E-value=1.3e+02 Score=19.32 Aligned_cols=35 Identities=20% Similarity=0.184 Sum_probs=22.2
Q ss_pred EEEccCCCCccch--HHHHHHHHhCCcEEEEEecCCC
Q 032072 22 VLVHGISGGAWCW--YKVRCLMENSGYKVSCINLKGS 56 (148)
Q Consensus 22 l~~hG~~~~~~~~--~~~~~~l~~~~~~v~~~d~~g~ 56 (148)
.+..+-||..... ..++..|.+.|++|+.+|.-..
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D~~ 38 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLDPQ 38 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEESTT
T ss_pred EEEcCCCCccHHHHHHHHHhccccccccccccccCcc
Confidence 3444444443332 3578888889999999998543
No 365
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=30.08 E-value=84 Score=24.80 Aligned_cols=23 Identities=17% Similarity=0.115 Sum_probs=18.2
Q ss_pred CCcEEEEEeChhHHHHHHHHHhh
Q 032072 86 NEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
.++-.++|||+|=+.++..+.-.
T Consensus 264 I~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 264 IKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred CCCCEEeecCHHHHHHHHHhCCC
Confidence 67789999999988777776533
No 366
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=29.98 E-value=1.8e+02 Score=19.60 Aligned_cols=87 Identities=21% Similarity=0.246 Sum_probs=46.8
Q ss_pred CCCCeEEEEccCCCCccchH-HHHHHHHhC-CcEEEEEecCCCCCCCC----CCC----CCcchhhhHHH-----HHHHH
Q 032072 16 VQKPHFVLVHGISGGAWCWY-KVRCLMENS-GYKVSCINLKGSGTDPS----DAN----SIHSFDDYNKP-----LMDFM 80 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~~~-~~~~~l~~~-~~~v~~~d~~g~g~s~~----~~~----~~~~~~~~~~~-----~~~~~ 80 (148)
+..+.|++++-.......+. .+.+.+.+. |+.+...+... ..... ... ..-+.....+. +.+.+
T Consensus 29 ~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~-~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~l 107 (212)
T cd03146 29 KARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD-TEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAIL 107 (212)
T ss_pred cCCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC-cccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHHH
Confidence 35577888886666544443 455667777 88887776543 10000 000 00122222222 23333
Q ss_pred HhcCCCCcEEEEEeChhHHHHHHH
Q 032072 81 SSLTDNEKVILVGHSAGGLSITQA 104 (148)
Q Consensus 81 ~~~~~~~~i~lvG~S~Gg~~a~~~ 104 (148)
+... .....++|.|.|+.+...-
T Consensus 108 ~~~~-~~g~~i~G~SAGa~i~~~~ 130 (212)
T cd03146 108 KAAL-ERGVVYIGWSAGSNCWFPS 130 (212)
T ss_pred HHHH-HCCCEEEEECHhHHhhCCC
Confidence 3332 2457899999999988873
No 367
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=29.81 E-value=2.4e+02 Score=21.05 Aligned_cols=75 Identities=16% Similarity=0.147 Sum_probs=43.4
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEE-EEeC
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVIL-VGHS 95 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l-vG~S 95 (148)
.+.+|++--|...+...|...++.+.+.|-.=+++-.||...-... ...+. ....+. .+++.. .-+|++ ..||
T Consensus 224 ~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~--~~~~l--dl~~i~-~lk~~~-~~PV~~d~~Hs 297 (360)
T PRK12595 224 VNKPVLLKRGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKA--TRNTL--DISAVP-ILKQET-HLPVMVDVTHS 297 (360)
T ss_pred cCCcEEEeCCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCC--CCCCc--CHHHHH-HHHHHh-CCCEEEeCCCC
Confidence 4568999999999999999988888876653344444444211111 01111 122222 333322 246777 7999
Q ss_pred hh
Q 032072 96 AG 97 (148)
Q Consensus 96 ~G 97 (148)
.|
T Consensus 298 ~G 299 (360)
T PRK12595 298 TG 299 (360)
T ss_pred Cc
Confidence 88
No 368
>PF04763 DUF562: Protein of unknown function (DUF562); InterPro: IPR006850 This represents a conserved region found in a number of Chlamydophila pneumoniae proteins.
Probab=29.62 E-value=1.5e+02 Score=18.81 Aligned_cols=39 Identities=18% Similarity=0.112 Sum_probs=27.3
Q ss_pred CCCCeEEEEccCCC----CccchHHHHHHHHhCCcE---EEEEecC
Q 032072 16 VQKPHFVLVHGISG----GAWCWYKVRCLMENSGYK---VSCINLK 54 (148)
Q Consensus 16 ~~~~~vl~~hG~~~----~~~~~~~~~~~l~~~~~~---v~~~d~~ 54 (148)
.+.-+|++.|+..+ .+..+..+.+.|...||. ++..+..
T Consensus 15 Ek~vvVv~~~~~~~~~~l~~~s~~~l~~eL~~~GYSylNIfs~~~~ 60 (146)
T PF04763_consen 15 EKNVVVVCNHSWPGPESLPPESVSLLIEELEESGYSYLNIFSCSSE 60 (146)
T ss_pred cCcEEEEEeCCcccccCCChHHHHHHHHHHhhcCCceEEEEEEcCC
Confidence 35568888898875 455677788899888875 5555544
No 369
>COG2201 CheB Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms]
Probab=29.61 E-value=1.1e+02 Score=22.72 Aligned_cols=36 Identities=22% Similarity=0.368 Sum_probs=26.2
Q ss_pred CcEEEEEeChhHHHHHHHHH-hhchhhceeeEecccc
Q 032072 87 EKVILVGHSAGGLSITQASH-KFGNKIRLAVYLAATM 122 (148)
Q Consensus 87 ~~i~lvG~S~Gg~~a~~~~~-~~~~~i~~~i~~~~~~ 122 (148)
.+++++|-|.||.-+++... ..|..+..-+++.--.
T Consensus 157 ~~iV~IGaStGGp~AL~~il~~lP~~~p~pvvIvQHM 193 (350)
T COG2201 157 RKIVAIGASTGGPAALRAVLPALPADFPAPVVIVQHM 193 (350)
T ss_pred ccEEEEEeCCCCHHHHHHHHHhCCCCCCCCEEEEecC
Confidence 47999999999998887755 6677666445554333
No 370
>PRK13936 phosphoheptose isomerase; Provisional
Probab=29.58 E-value=1.5e+02 Score=19.67 Aligned_cols=30 Identities=13% Similarity=0.257 Sum_probs=22.0
Q ss_pred HHhcCCCCcEEEEEeChhHHHHHHHHHhhc
Q 032072 80 MSSLTDNEKVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 80 ~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
.+.+...++|.++|.+-.+.+|..++.+..
T Consensus 37 ~~~l~~a~~I~i~G~G~S~~~A~~~~~~l~ 66 (197)
T PRK13936 37 VQALLNEGKILACGNGGSAADAQHFSAELL 66 (197)
T ss_pred HHHHHCCCEEEEEeCcHhHHHHHHHHHHcc
Confidence 333444689999998888888888876554
No 371
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=29.35 E-value=2.1e+02 Score=20.19 Aligned_cols=41 Identities=7% Similarity=0.109 Sum_probs=31.6
Q ss_pred CCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCC
Q 032072 16 VQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGS 56 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~ 56 (148)
+.+.+|++--|...+...|...++.+.+.|-.=+.+-.||.
T Consensus 120 ~tgkPVilk~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~ 160 (250)
T PRK13397 120 HIDKPILFKRGLMATIEEYLGALSYLQDTGKSNIILCERGV 160 (250)
T ss_pred ccCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEcccc
Confidence 34678999999999999999999999877764444545554
No 372
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=29.32 E-value=46 Score=24.22 Aligned_cols=18 Identities=17% Similarity=0.106 Sum_probs=13.8
Q ss_pred EEEEEeChhHHHHHHHHH
Q 032072 89 VILVGHSAGGLSITQASH 106 (148)
Q Consensus 89 i~lvG~S~Gg~~a~~~~~ 106 (148)
-.++|||+|=+.+..++.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 368999999877766654
No 373
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=29.24 E-value=83 Score=21.32 Aligned_cols=36 Identities=22% Similarity=0.351 Sum_probs=19.7
Q ss_pred CCCeEEEEccCCCCccc-----hHHHHHHHHhCCcEEEEEe
Q 032072 17 QKPHFVLVHGISGGAWC-----WYKVRCLMENSGYKVSCIN 52 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~-----~~~~~~~l~~~~~~v~~~d 52 (148)
+++.|++.+|.+..... |..+++.|.+.++.|+..-
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g 144 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLG 144 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEc
Confidence 45678888887764443 5567778876676665443
No 374
>PF08496 Peptidase_S49_N: Peptidase family S49 N-terminal; InterPro: IPR013703 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain is found to the N terminus of bacterial signal peptidases that belong to the MEROPS peptidase family S49 (protease IV family, clan SK) (see also IPR002142 from INTERPRO) [, ]. ; GO: 0004252 serine-type endopeptidase activity, 0005886 plasma membrane
Probab=29.19 E-value=1.5e+02 Score=19.10 Aligned_cols=49 Identities=16% Similarity=0.307 Sum_probs=35.9
Q ss_pred CcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHHH
Q 032072 45 GYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLS 100 (148)
Q Consensus 45 ~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~ 100 (148)
..+++++|+.|-=. ....+...+.+.+++....+.+.|.+-=-|-||.+
T Consensus 97 ~~r~~VldF~Gdi~-------A~~v~~LReeisail~~a~~~DeV~~rLES~GG~V 145 (155)
T PF08496_consen 97 KPRLFVLDFKGDIK-------ASEVESLREEISAILSVATPEDEVLVRLESPGGMV 145 (155)
T ss_pred CCeEEEEecCCCcc-------HHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCcee
Confidence 57899999886321 14566777778877777776788888888888864
No 375
>PRK02090 phosphoadenosine phosphosulfate reductase; Provisional
Probab=28.84 E-value=1.9e+02 Score=19.91 Aligned_cols=43 Identities=12% Similarity=0.172 Sum_probs=24.2
Q ss_pred HHHHHHHhcCCCCcEEEEEeChhH--HHHHHHHHhhchhhceeeEeccc
Q 032072 75 PLMDFMSSLTDNEKVILVGHSAGG--LSITQASHKFGNKIRLAVYLAAT 121 (148)
Q Consensus 75 ~~~~~~~~~~~~~~i~lvG~S~Gg--~~a~~~~~~~~~~i~~~i~~~~~ 121 (148)
.+...++... ++ +++++|.|- .+++.++.+....+. ++.+++.
T Consensus 31 ~i~~a~~~~~--~~-i~vs~SGGKDS~vlL~L~~~~~~~i~-vvfiDTG 75 (241)
T PRK02090 31 RLAWALENFG--GR-LALVSSFGAEDAVLLHLVAQVDPDIP-VIFLDTG 75 (241)
T ss_pred HHHHHHHHcC--CC-EEEEecCCHHHHHHHHHHHhcCCCCc-EEEecCC
Confidence 3444444444 33 788999884 566666666543444 3445544
No 376
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=28.56 E-value=2.2e+02 Score=20.38 Aligned_cols=51 Identities=18% Similarity=0.221 Sum_probs=26.7
Q ss_pred HHHHHhCCcE--EEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChh
Q 032072 38 RCLMENSGYK--VSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAG 97 (148)
Q Consensus 38 ~~~l~~~~~~--v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~G 97 (148)
.+.+.+.|.. -+++| ||.|.+.. .++-.+ +...++.+.....-+++|+|-=
T Consensus 169 i~~a~~~GI~~~~IilD-PGiGF~k~-------~~~n~~-ll~~l~~l~~lg~Pilvg~SRK 221 (282)
T PRK11613 169 IARCEAAGIAKEKLLLD-PGFGFGKN-------LSHNYQ-LLARLAEFHHFNLPLLVGMSRK 221 (282)
T ss_pred HHHHHHcCCChhhEEEe-CCCCcCCC-------HHHHHH-HHHHHHHHHhCCCCEEEEeccc
Confidence 3445567876 78888 47775432 222222 2222233332456778898833
No 377
>PLN02735 carbamoyl-phosphate synthase
Probab=28.52 E-value=4.1e+02 Score=23.34 Aligned_cols=70 Identities=10% Similarity=0.119 Sum_probs=41.3
Q ss_pred HHHHHHHhCCcEEEEEecCCCCCCCCCC--CCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhc
Q 032072 36 KVRCLMENSGYKVSCINLKGSGTDPSDA--NSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 36 ~~~~~l~~~~~~v~~~d~~g~g~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
..+..|++.|+.++.++......|.... +..+...-..+++.++++... . ..++. ++||...+.++....
T Consensus 599 ~~~~alr~~G~~tI~v~~npetvstd~~~aD~~y~~pl~~e~vl~i~~~e~-~-d~Vi~--~~Ggq~~l~la~~l~ 670 (1102)
T PLN02735 599 HASFALQDAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLER-P-DGIIV--QFGGQTPLKLALPIQ 670 (1102)
T ss_pred HHHHHHHHcCCeEEEEeCCCccccCCcccCCeEEEEeCCHHHHHHHHHHhC-C-CEEEE--CCCchHHHHHHHHHH
Confidence 4678888999999999876554443211 111222233666777776665 2 23333 578877766665443
No 378
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Probab=28.51 E-value=2.4e+02 Score=20.93 Aligned_cols=38 Identities=13% Similarity=0.157 Sum_probs=21.5
Q ss_pred HHHhcCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEec
Q 032072 79 FMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLA 119 (148)
Q Consensus 79 ~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~ 119 (148)
+.+.+...++++++| ||.++++++....+.-..+.++.
T Consensus 137 l~~~~~~~~~vvViG---gG~ig~E~A~~l~~~g~~Vtlv~ 174 (396)
T PRK09754 137 LREVLQPERSVVIVG---AGTIGLELAASATQRRCKVTVIE 174 (396)
T ss_pred HHHHhhcCCeEEEEC---CCHHHHHHHHHHHHcCCeEEEEe
Confidence 333333357899998 56667777665443333444444
No 379
>PF13289 SIR2_2: SIR2-like domain
Probab=28.51 E-value=76 Score=19.29 Aligned_cols=24 Identities=21% Similarity=0.423 Sum_probs=15.4
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHH
Q 032072 76 LMDFMSSLTDNEKVILVGHSAGGL 99 (148)
Q Consensus 76 ~~~~~~~~~~~~~i~lvG~S~Gg~ 99 (148)
+...++.+.....++++|+|+.=.
T Consensus 76 ~~~~l~~~l~~~~~lfiGys~~D~ 99 (143)
T PF13289_consen 76 FPNFLRSLLRSKTLLFIGYSFNDP 99 (143)
T ss_pred HHHHHHHHHcCCCEEEEEECCCCH
Confidence 334444333357899999998854
No 380
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=28.38 E-value=2.4e+02 Score=20.72 Aligned_cols=80 Identities=15% Similarity=0.105 Sum_probs=44.9
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHHhCCcE---EEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEE
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYK---VSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVG 93 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~---v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG 93 (148)
.+.+|++--|. ++...+....+.+.+.|.. ++..-+...-. ...++.--.....+++.. ..+|.+-.
T Consensus 132 ~gkPvilStGm-atl~Ei~~Av~~i~~~G~~~~~i~llhC~s~YP--------~~~~~~nL~~I~~Lk~~f-~~pVG~Sd 201 (329)
T TIGR03569 132 FGKPVILSTGM-ATLEEIEAAVGVLRDAGTPDSNITLLHCTTEYP--------APFEDVNLNAMDTLKEAF-DLPVGYSD 201 (329)
T ss_pred cCCcEEEECCC-CCHHHHHHHHHHHHHcCCCcCcEEEEEECCCCC--------CCcccCCHHHHHHHHHHh-CCCEEECC
Confidence 45678888888 5777888888888766653 44433321111 111111112222333333 35788889
Q ss_pred eChhHHHHHHHHH
Q 032072 94 HSAGGLSITQASH 106 (148)
Q Consensus 94 ~S~Gg~~a~~~~~ 106 (148)
|+.|-.++.....
T Consensus 202 Ht~G~~~~~aAva 214 (329)
T TIGR03569 202 HTLGIEAPIAAVA 214 (329)
T ss_pred CCccHHHHHHHHH
Confidence 9999766654443
No 381
>PLN02347 GMP synthetase
Probab=28.31 E-value=2.4e+02 Score=22.33 Aligned_cols=55 Identities=11% Similarity=0.206 Sum_probs=28.8
Q ss_pred cchhhhHHH-HHHHHHhcCCCCcEEEEEeChh--HHHHHHHHHh-hchhhceeeEecccc
Q 032072 67 HSFDDYNKP-LMDFMSSLTDNEKVILVGHSAG--GLSITQASHK-FGNKIRLAVYLAATM 122 (148)
Q Consensus 67 ~~~~~~~~~-~~~~~~~~~~~~~i~lvG~S~G--g~~a~~~~~~-~~~~i~~~i~~~~~~ 122 (148)
+++++..+. +.++.+.+. ...-+++|.|-| ..++..++.+ .++++.++.+-.+..
T Consensus 209 ~~~~~~~~~~i~~i~~~~~-~~~~vvvalSGGVDSsvla~l~~~alG~~v~av~id~g~~ 267 (536)
T PLN02347 209 WKMQDVLEEQIELIKATVG-PDEHVICALSGGVDSTVAATLVHKAIGDRLHCVFVDNGLL 267 (536)
T ss_pred cCcchHHHHHHHHHHHHhc-cCCeEEEEecCChhHHHHHHHHHHHhCCcEEEEEEeCCCC
Confidence 444444433 333333333 344567899988 3445555555 455666655554443
No 382
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=28.16 E-value=56 Score=23.38 Aligned_cols=17 Identities=18% Similarity=0.198 Sum_probs=14.8
Q ss_pred EEEEeChhHHHHHHHHH
Q 032072 90 ILVGHSAGGLSITQASH 106 (148)
Q Consensus 90 ~lvG~S~Gg~~a~~~~~ 106 (148)
.+.|-|.||.++..++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 47899999999998875
No 383
>PF14987 NADHdh_A3: NADH dehydrogenase 1 alpha subcomplex subunit 3
Probab=27.86 E-value=1e+02 Score=17.44 Aligned_cols=29 Identities=28% Similarity=0.455 Sum_probs=21.9
Q ss_pred HHHHHHHHHhcCCCCcEEEEEeChhHHHH
Q 032072 73 NKPLMDFMSSLTDNEKVILVGHSAGGLSI 101 (148)
Q Consensus 73 ~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a 101 (148)
+.++-++++..=..+++.++.+..||...
T Consensus 2 A~r~~afLKnAWaKEPVlvvSf~ig~lav 30 (84)
T PF14987_consen 2 AARLGAFLKNAWAKEPVLVVSFVIGGLAV 30 (84)
T ss_pred chHHHHHHHHhhhcCCeEEeeehhhhhhh
Confidence 34566777776557899999999998753
No 384
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=27.85 E-value=1.6e+02 Score=20.62 Aligned_cols=34 Identities=26% Similarity=0.406 Sum_probs=23.5
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhc
Q 032072 76 LMDFMSSLTDNEKVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 76 ~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
+.++++.+...++|+++|...-..++..+..++-
T Consensus 118 l~~~~~~i~~a~~I~i~G~G~s~~~A~~~~~~l~ 151 (278)
T PRK11557 118 LHECVTMLRSARRIILTGIGASGLVAQNFAWKLM 151 (278)
T ss_pred HHHHHHHHhcCCeEEEEecChhHHHHHHHHHHHh
Confidence 3444444455689999999887788877776553
No 385
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=27.67 E-value=1.4e+02 Score=18.05 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=17.8
Q ss_pred CCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEe
Q 032072 16 VQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCIN 52 (148)
Q Consensus 16 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d 52 (148)
+++++|+++...+..+. ..+..|...||.+..++
T Consensus 85 ~~~~vvvyC~~~G~rs~---~a~~~L~~~G~~v~~L~ 118 (128)
T cd01520 85 RDPKLLIYCARGGMRSQ---SLAWLLESLGIDVPLLE 118 (128)
T ss_pred CCCeEEEEeCCCCccHH---HHHHHHHHcCCceeEeC
Confidence 45678888852222222 22244555788755443
No 386
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=27.48 E-value=1.5e+02 Score=21.26 Aligned_cols=33 Identities=21% Similarity=0.456 Sum_probs=21.3
Q ss_pred CCeEEEEccCCCCcc-----chHHHHHHHHhCCcEEEE
Q 032072 18 KPHFVLVHGISGGAW-----CWYKVRCLMENSGYKVSC 50 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~-----~~~~~~~~l~~~~~~v~~ 50 (148)
++.++++||...... .|..+++.+.+.|+.++.
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl 215 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKL 215 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEE
Confidence 456777888754333 355677777767887654
No 387
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=27.41 E-value=2.3e+02 Score=20.02 Aligned_cols=36 Identities=19% Similarity=0.297 Sum_probs=23.4
Q ss_pred eEEEEccC--CCCccchHHHHHHHHhCCcEEEEEecCC
Q 032072 20 HFVLVHGI--SGGAWCWYKVRCLMENSGYKVSCINLKG 55 (148)
Q Consensus 20 ~vl~~hG~--~~~~~~~~~~~~~l~~~~~~v~~~d~~g 55 (148)
++++++++ ||.......+++.|.+.|+.|..+...+
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 45555654 3444555678888987898887765443
No 388
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=27.27 E-value=68 Score=19.26 Aligned_cols=31 Identities=16% Similarity=0.285 Sum_probs=22.3
Q ss_pred cEEEEE-eChhHHHHHHHHHhhchhhceeeEec
Q 032072 88 KVILVG-HSAGGLSITQASHKFGNKIRLAVYLA 119 (148)
Q Consensus 88 ~i~lvG-~S~Gg~~a~~~~~~~~~~i~~~i~~~ 119 (148)
|+.++| ..+.|.-.+.++..+|+ ++-+.+++
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~ 32 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVS 32 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeee
Confidence 578888 88888888888888874 55434333
No 389
>PRK14046 malate--CoA ligase subunit beta; Provisional
Probab=27.18 E-value=50 Score=24.78 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=27.8
Q ss_pred CCcEEEEEeChhHHHHHHHHHhhchhhceeeE
Q 032072 86 NEKVILVGHSAGGLSITQASHKFGNKIRLAVY 117 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~ 117 (148)
..+++++|.+.||...=..+.++|+++.++.+
T Consensus 118 ~g~~v~~~s~~GGv~iEe~~~~~p~~i~~~~i 149 (392)
T PRK14046 118 SERVRVIASARGGMEIEEIAAKEPEAIIQVVV 149 (392)
T ss_pred CCcEEEEEeCCCCCchHHHhhhChhheEEEEc
Confidence 35789999999999999999999999888554
No 390
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional
Probab=27.10 E-value=2.6e+02 Score=20.55 Aligned_cols=37 Identities=24% Similarity=0.404 Sum_probs=21.6
Q ss_pred HhcCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecc
Q 032072 81 SSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAA 120 (148)
Q Consensus 81 ~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~ 120 (148)
..+...+++.++| ||.+.++++....+.-..+.++..
T Consensus 136 ~~~~~~~~vvViG---gG~~g~e~A~~L~~~g~~Vtlv~~ 172 (377)
T PRK04965 136 TQLRDAQRVLVVG---GGLIGTELAMDLCRAGKAVTLVDN 172 (377)
T ss_pred HHhhcCCeEEEEC---CCHHHHHHHHHHHhcCCeEEEEec
Confidence 3333357899998 566666666654433344555543
No 391
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=27.09 E-value=1.9e+02 Score=19.17 Aligned_cols=25 Identities=12% Similarity=0.210 Sum_probs=19.8
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhh
Q 032072 84 TDNEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 84 ~~~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
...++|.++|..-.+.++..++...
T Consensus 42 ~~~~rI~i~G~G~S~~~A~~~a~~l 66 (192)
T PRK00414 42 KAGGKVLSCGNGGSHCDAMHFAEEL 66 (192)
T ss_pred HCCCEEEEEeCcHHHHHHHHHHHHh
Confidence 3468999999888899888887544
No 392
>PRK13685 hypothetical protein; Provisional
Probab=27.05 E-value=2.5e+02 Score=20.37 Aligned_cols=50 Identities=12% Similarity=0.113 Sum_probs=26.4
Q ss_pred EEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHH
Q 032072 48 VSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGL 99 (148)
Q Consensus 48 v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~ 99 (148)
++++|.-+.-..... .....+...+.+.++++.+.+.+++.++.++-.+.
T Consensus 92 vlvlD~S~SM~~~D~--~p~RL~~ak~~~~~~l~~l~~~d~vglv~Fa~~a~ 141 (326)
T PRK13685 92 MLVIDVSQSMRATDV--EPNRLAAAQEAAKQFADELTPGINLGLIAFAGTAT 141 (326)
T ss_pred EEEEECCccccCCCC--CCCHHHHHHHHHHHHHHhCCCCCeEEEEEEcCcee
Confidence 566665543222111 11234455555667777765456777776665544
No 393
>PRK06193 hypothetical protein; Provisional
Probab=27.00 E-value=1.2e+02 Score=20.58 Aligned_cols=30 Identities=17% Similarity=0.252 Sum_probs=21.5
Q ss_pred chhhhHHHHHHHHHhcC-CCCcEEEEEeChh
Q 032072 68 SFDDYNKPLMDFMSSLT-DNEKVILVGHSAG 97 (148)
Q Consensus 68 ~~~~~~~~~~~~~~~~~-~~~~i~lvG~S~G 97 (148)
..+.+.+++.++++.+. ..+++.+|||..+
T Consensus 136 ~~~~y~~~l~~~I~~l~~~~~~vLlVgHnp~ 166 (206)
T PRK06193 136 RNALLKAGLRPLLTTPPDPGTNTVLVGHDDN 166 (206)
T ss_pred hHHHHHHHHHHHHhhCCCCCCeEEEEeCchH
Confidence 33445677888888875 3467999999953
No 394
>PF02540 NAD_synthase: NAD synthase; InterPro: IPR022310 NAD+ synthase (6.3.5.1 from EC) catalyzes the last step in the biosynthesis of nicotinamide adenine dinucleotide and is induced by stress factors such as heat shock and glucose limitation. The three-dimensional structure of NH3-dependent NAD+ synthetase from Bacillus subtilis, in its free form and in complex with ATP shows that the enzyme consists of a tight homodimer with alpha/beta subunit topology []. Catalyzes the synthesis of GMP from XMP. The protein is a homodimer, but in the archaea it is a heterodimer composed of a glutamine amidotransferase subunit (A) and a GMP-binding subunit (B). This entry contains the GMP-binding subunit (B). ; PDB: 2VXO_A 3UOW_B 3N05_A 2DPL_B 3A4I_A 3SEQ_D 3SZG_A 3SYT_A 3SDB_A 3SEZ_C ....
Probab=26.93 E-value=2.2e+02 Score=19.75 Aligned_cols=47 Identities=17% Similarity=0.205 Sum_probs=27.0
Q ss_pred hhhHHHHHHHHHhcCCCCcEEEEEeChhHH--HHHHHHHh-h-chhhceeeEe
Q 032072 70 DDYNKPLMDFMSSLTDNEKVILVGHSAGGL--SITQASHK-F-GNKIRLAVYL 118 (148)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~--~a~~~~~~-~-~~~i~~~i~~ 118 (148)
+.....+.+.++... .+=+++|.|-|-- ++..++.+ . ++++.++++-
T Consensus 3 ~~l~~~L~~~~~~~g--~~~vVvglSGGiDSav~A~La~~Alg~~~v~~v~mp 53 (242)
T PF02540_consen 3 EALVDFLRDYVKKSG--AKGVVVGLSGGIDSAVVAALAVKALGPDNVLAVIMP 53 (242)
T ss_dssp HHHHHHHHHHHHHHT--TSEEEEEETSSHHHHHHHHHHHHHHGGGEEEEEEEE
T ss_pred HHHHHHHHHHHHHhC--CCeEEEEcCCCCCHHHHHHHHHHHhhhccccccccc
Confidence 345556667776654 4667799999943 33333333 2 4556655443
No 395
>PRK14974 cell division protein FtsY; Provisional
Probab=26.73 E-value=2.6e+02 Score=20.58 Aligned_cols=64 Identities=19% Similarity=0.270 Sum_probs=35.1
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhch--hhceeeE
Q 032072 44 SGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGN--KIRLAVY 117 (148)
Q Consensus 44 ~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~--~i~~~i~ 117 (148)
.++.++.+|-.|... +-.+..+.+..+.+... ...+++|.-+.-|.-+..-+..+.+ .+.++|+
T Consensus 221 ~~~DvVLIDTaGr~~---------~~~~lm~eL~~i~~~~~-pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIl 286 (336)
T PRK14974 221 RGIDVVLIDTAGRMH---------TDANLMDELKKIVRVTK-PDLVIFVGDALAGNDAVEQAREFNEAVGIDGVIL 286 (336)
T ss_pred CCCCEEEEECCCccC---------CcHHHHHHHHHHHHhhC-CceEEEeeccccchhHHHHHHHHHhcCCCCEEEE
Confidence 567788888776533 12334444555555444 3445555555556555555554432 4566665
No 396
>cd05009 SIS_GlmS_GlmD_2 SIS (Sugar ISomerase) domain repeat 2 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=26.66 E-value=1.1e+02 Score=18.81 Aligned_cols=33 Identities=9% Similarity=0.189 Sum_probs=21.0
Q ss_pred HHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhc
Q 032072 77 MDFMSSLTDNEKVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 77 ~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
.+..+.+...+++.++|....-.++...+.+.-
T Consensus 4 ~~~a~~~~~~~~i~~~G~G~s~~~a~e~~~kl~ 36 (153)
T cd05009 4 KELAEKLKEAKSFYVLGRGPNYGTALEGALKLK 36 (153)
T ss_pred HHHHHHHhccCcEEEEcCCCCHHHHHHHHHHHH
Confidence 344444444678999988766666666655443
No 397
>cd01406 SIR2-like Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines; and are members of the SIR2 superfamily of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation.
Probab=26.65 E-value=98 Score=21.19 Aligned_cols=46 Identities=17% Similarity=0.226 Sum_probs=26.3
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhh-----chhhceeeEeccc
Q 032072 76 LMDFMSSLTDNEKVILVGHSAGGLSITQASHKF-----GNKIRLAVYLAAT 121 (148)
Q Consensus 76 ~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~-----~~~i~~~i~~~~~ 121 (148)
+...++.+.....+.++|+|+.=.....++... +..-.+.+++...
T Consensus 169 ~~~~l~~ll~~~~~LFiG~S~~D~~i~~ll~~~~~~~~~~~~~hy~~~~~~ 219 (242)
T cd01406 169 ATKFLKSDLEKYTVLFIGYSLTDPNIRYLLERLRKNYEGKHASHFALLQKP 219 (242)
T ss_pred HHHHHHHHHhcCcEEEEEcCCCCCcHHHHHHHHHHHhccCCCceEEEEeCC
Confidence 344555554357899999999865444444322 2234555555433
No 398
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=26.49 E-value=69 Score=22.72 Aligned_cols=19 Identities=26% Similarity=0.420 Sum_probs=16.5
Q ss_pred EEEEeChhHHHHHHHHHhh
Q 032072 90 ILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 90 ~lvG~S~Gg~~a~~~~~~~ 108 (148)
.++|-|.||.++..++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 6889999999999998754
No 399
>COG4075 Uncharacterized conserved protein, homolog of nitrogen regulatory protein PII [Function unknown]
Probab=26.48 E-value=1.5e+02 Score=17.60 Aligned_cols=53 Identities=19% Similarity=0.303 Sum_probs=27.9
Q ss_pred HHHHHHHhCCcE-EEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEE
Q 032072 36 KVRCLMENSGYK-VSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVG 93 (148)
Q Consensus 36 ~~~~~l~~~~~~-v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG 93 (148)
...+.+++.|.. .+.++++|.....- ...+.++.-+-....++.+. ++.+++|
T Consensus 18 kaiN~mad~GiTGFfl~eYrGvsPd~w---kgf~~~EDpE~aik~i~D~s--~~AVlI~ 71 (110)
T COG4075 18 KAINIMADAGITGFFLHEYRGVSPDKW---KGFSKEEDPESAIKAIRDLS--DKAVLIG 71 (110)
T ss_pred HHHHHHHhcCcceEEEEEecCcChhHh---cCcccccCHHHHHHHHHHhh--hceEEEE
Confidence 456677777764 77889998743321 12333333333333444443 4555554
No 400
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=26.45 E-value=97 Score=22.61 Aligned_cols=25 Identities=32% Similarity=0.468 Sum_probs=20.6
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhhc
Q 032072 85 DNEKVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 85 ~~~~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
.++++.++|.|.|=.++.+.+..+.
T Consensus 40 gPKkVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 40 GPKKVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred CCceEEEEecCCcccHHHHHHHHhC
Confidence 4679999999999888888777664
No 401
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=26.03 E-value=2e+02 Score=20.29 Aligned_cols=27 Identities=26% Similarity=0.249 Sum_probs=18.6
Q ss_pred chhhhHHHHHHHHHhcC-CCCcEEEEEe
Q 032072 68 SFDDYNKPLMDFMSSLT-DNEKVILVGH 94 (148)
Q Consensus 68 ~~~~~~~~~~~~~~~~~-~~~~i~lvG~ 94 (148)
...++.+.+++.++... ...++++++|
T Consensus 194 ~~~~Ql~WL~~~L~~a~~~~~~v~I~~H 221 (296)
T cd00842 194 DPAGQLQWLEDELQEAEQAGEKVWIIGH 221 (296)
T ss_pred CHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 34566777777777663 2468889988
No 402
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=25.82 E-value=71 Score=23.49 Aligned_cols=18 Identities=17% Similarity=0.211 Sum_probs=15.5
Q ss_pred EEEEeChhHHHHHHHHHh
Q 032072 90 ILVGHSAGGLSITQASHK 107 (148)
Q Consensus 90 ~lvG~S~Gg~~a~~~~~~ 107 (148)
.+.|-|.||.++..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 578999999999998763
No 403
>PRK13937 phosphoheptose isomerase; Provisional
Probab=25.76 E-value=2e+02 Score=18.89 Aligned_cols=33 Identities=15% Similarity=0.325 Sum_probs=20.5
Q ss_pred HHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHH
Q 032072 74 KPLMDFMSSLTDNEKVILVGHSAGGLSITQASH 106 (148)
Q Consensus 74 ~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~ 106 (148)
+...+..+.+...++|.++|...-+.++..++.
T Consensus 26 ~aa~~i~~~l~~a~rI~i~G~G~S~~~A~~~a~ 58 (188)
T PRK13937 26 KVAEALIEALANGGKILLCGNGGSAADAQHIAA 58 (188)
T ss_pred HHHHHHHHHHHCCCEEEEEeCcHhHHHHHHHHH
Confidence 334444444455789999997766666655443
No 404
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=25.69 E-value=2e+02 Score=18.94 Aligned_cols=60 Identities=5% Similarity=0.056 Sum_probs=30.9
Q ss_pred CCeEEEEccCCC---CccchHHHHHHHHhCCcEEEEEecCCC---CCCCCCCCCCcchhhhHHHHHHHH
Q 032072 18 KPHFVLVHGISG---GAWCWYKVRCLMENSGYKVSCINLKGS---GTDPSDANSIHSFDDYNKPLMDFM 80 (148)
Q Consensus 18 ~~~vl~~hG~~~---~~~~~~~~~~~l~~~~~~v~~~d~~g~---g~s~~~~~~~~~~~~~~~~~~~~~ 80 (148)
+.++++++-... ......+-...|++.|+.++-+. +|+ |... .....++++..+.+.+.+
T Consensus 113 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~-~g~la~~~~g--~g~~~~~~~i~~~v~~~~ 178 (182)
T PRK07313 113 TTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPK-EGLLACGDEG--YGALADIETILETIENTL 178 (182)
T ss_pred CCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCC-CCccccCCcc--CCCCCCHHHHHHHHHHHh
Confidence 445666664322 22223445667777887776665 333 2221 112356666666666554
No 405
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=25.61 E-value=2.5e+02 Score=19.90 Aligned_cols=102 Identities=13% Similarity=0.091 Sum_probs=58.1
Q ss_pred CCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEE-EEeC
Q 032072 17 QKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVIL-VGHS 95 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l-vG~S 95 (148)
.+.+|++--|..++...|...++.+...|-.=+.+-.+|.-..+ .+.....--.....+++.. ..+|++ ..||
T Consensus 133 ~gkPV~lk~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~~t~~-----~Y~~~~vdl~~i~~lk~~~-~~pV~~D~sHs 206 (266)
T PRK13398 133 TKKPILLKRGMSATLEEWLYAAEYIMSEGNENVVLCERGIRTFE-----TYTRNTLDLAAVAVIKELS-HLPIIVDPSHA 206 (266)
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCeEEEEECCCCCCC-----CCCHHHHHHHHHHHHHhcc-CCCEEEeCCCc
Confidence 45789999999999999998888888666543444455541111 1223333333334444443 356777 7999
Q ss_pred hh-----HHHHHHHHHhhchhhceeeEecccccCCCC
Q 032072 96 AG-----GLSITQASHKFGNKIRLAVYLAATMLKLGF 127 (148)
Q Consensus 96 ~G-----g~~a~~~~~~~~~~i~~~i~~~~~~~~~~~ 127 (148)
.| ..++.... .. -..++++-.-+.+....
T Consensus 207 ~G~~~~v~~~~~aAv-a~--Ga~Gl~iE~H~~pd~a~ 240 (266)
T PRK13398 207 TGRRELVIPMAKAAI-AA--GADGLMIEVHPEPEKAL 240 (266)
T ss_pred ccchhhHHHHHHHHH-Hc--CCCEEEEeccCCccccC
Confidence 98 33333222 22 24566665555544333
No 406
>PTZ00445 p36-lilke protein; Provisional
Probab=25.35 E-value=2.3e+02 Score=19.51 Aligned_cols=89 Identities=20% Similarity=0.174 Sum_probs=46.4
Q ss_pred HHHHHHHHhCCcEEEEEecCCC-------CCCCCCCCCCcchhhhHHHHHHHHHhcC-CCCcEEEEEeChhHH-------
Q 032072 35 YKVRCLMENSGYKVSCINLKGS-------GTDPSDANSIHSFDDYNKPLMDFMSSLT-DNEKVILVGHSAGGL------- 99 (148)
Q Consensus 35 ~~~~~~l~~~~~~v~~~d~~g~-------g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~lvG~S~Gg~------- 99 (148)
..+.+.|.+.|.++++.|+-.. |+..+......-......++..++..+. ..-++.+|=+|-=-.
T Consensus 32 ~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~ 111 (219)
T PTZ00445 32 DKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRP 111 (219)
T ss_pred HHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCc
Confidence 4567788889999999997642 1222110111111222333444444442 134677777775432
Q ss_pred -------HHHHHHH--hhchhhceeeEeccccc
Q 032072 100 -------SITQASH--KFGNKIRLAVYLAATML 123 (148)
Q Consensus 100 -------~a~~~~~--~~~~~i~~~i~~~~~~~ 123 (148)
+.-.++. +....++++....|..+
T Consensus 112 ~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w 144 (219)
T PTZ00445 112 RYISGDRMVEAALKKSKCDFKIKKVYAYYPKFW 144 (219)
T ss_pred ceechHHHHHHHHHhcCccceeeeeeeeCCccc
Confidence 3333333 22335777766666654
No 407
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=24.93 E-value=3.4e+02 Score=21.22 Aligned_cols=62 Identities=6% Similarity=-0.013 Sum_probs=34.3
Q ss_pred CCeEEEEccCCCC---ccchHHHHHHHHhCCcEEEEEecC---CCCCCCCCCCCCcchhhhHHHHHHHHH
Q 032072 18 KPHFVLVHGISGG---AWCWYKVRCLMENSGYKVSCINLK---GSGTDPSDANSIHSFDDYNKPLMDFMS 81 (148)
Q Consensus 18 ~~~vl~~hG~~~~---~~~~~~~~~~l~~~~~~v~~~d~~---g~g~s~~~~~~~~~~~~~~~~~~~~~~ 81 (148)
+.+|++++..... ......-...|.+.|+.++-++.- .+|.... ......++..+.+..++.
T Consensus 180 ~~PvliaPaMN~~M~~npat~~Nl~~L~~~G~~vi~P~~g~lA~~g~~G~--Grm~e~~~I~~~v~~~~~ 247 (475)
T PRK13982 180 NRPILLAPAMNPLMWNNPATRRNVAQLKRDGVHMIGPNAGEMAERGEAGV--GRMAEPLEIAAAAEALLR 247 (475)
T ss_pred CCCEEEEEcCCHHHhcCHHHHHHHHHHHHCCCEEECCCCCccccCCCcCC--CCCCCHHHHHHHHHHHHh
Confidence 4567777755433 223334566777789888766531 0222222 123566777777776663
No 408
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=24.78 E-value=1.4e+02 Score=19.50 Aligned_cols=37 Identities=22% Similarity=0.251 Sum_probs=20.4
Q ss_pred hhhHHHHHHHHHhcCCCCcEEEEEeC-hhHHHHHHHHHh
Q 032072 70 DDYNKPLMDFMSSLTDNEKVILVGHS-AGGLSITQASHK 107 (148)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~i~lvG~S-~Gg~~a~~~~~~ 107 (148)
....+.+.+....+. ..++.++|.+ +.|..+..++..
T Consensus 29 ~a~v~l~~~~~~~l~-gk~vlViG~G~~~G~~~a~~L~~ 66 (168)
T cd01080 29 AGILELLKRYGIDLA-GKKVVVVGRSNIVGKPLAALLLN 66 (168)
T ss_pred HHHHHHHHHcCCCCC-CCEEEEECCcHHHHHHHHHHHhh
Confidence 333333333333344 6899999998 456644444443
No 409
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=24.58 E-value=3e+02 Score=20.48 Aligned_cols=48 Identities=19% Similarity=0.203 Sum_probs=32.7
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEEeChh--HHHHHHHHHhhchhhceeeEec
Q 032072 71 DYNKPLMDFMSSLTDNEKVILVGHSAG--GLSITQASHKFGNKIRLAVYLA 119 (148)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~i~lvG~S~G--g~~a~~~~~~~~~~i~~~i~~~ 119 (148)
.-...+..+++++. ..+++|||-|-= =-+=..++..+|++|.++.+=+
T Consensus 263 rK~~~l~nil~~~p-~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRd 312 (373)
T COG4850 263 RKGQSLRNILRRYP-DRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRD 312 (373)
T ss_pred hcccHHHHHHHhCC-CceEEEecCCCCcCHHHHHHHHHhCccceeeEeeee
Confidence 33345666778877 789999997633 2344455668999999876633
No 410
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=24.51 E-value=1.4e+02 Score=21.86 Aligned_cols=35 Identities=11% Similarity=0.113 Sum_probs=27.4
Q ss_pred eEEEEccCCCCccchHHHHHHHHhCCcEEEEEecC
Q 032072 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLK 54 (148)
Q Consensus 20 ~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~ 54 (148)
++++..|..|+-..+..+++.|.+.|+.|...-..
T Consensus 3 Il~~~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~ 37 (401)
T cd03784 3 VLITTIGSRGDVQPLVALAWALRAAGHEVRVATPP 37 (401)
T ss_pred EEEEeCCCcchHHHHHHHHHHHHHCCCeEEEeeCH
Confidence 46667787788888888999999899988766543
No 411
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=24.48 E-value=1.9e+02 Score=21.83 Aligned_cols=42 Identities=12% Similarity=0.199 Sum_probs=25.6
Q ss_pred HHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEecc
Q 032072 75 PLMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAA 120 (148)
Q Consensus 75 ~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~ 120 (148)
.+.+.+.... .+++.++| ||.++++++....+.-..+.++..
T Consensus 138 ~l~~~l~~~~-~~~vvViG---gG~ig~E~A~~l~~~g~~Vtli~~ 179 (438)
T PRK13512 138 AIDQFIKANQ-VDKALVVG---AGYISLEVLENLYERGLHPTLIHR 179 (438)
T ss_pred HHHHHHhhcC-CCEEEEEC---CCHHHHHHHHHHHhCCCcEEEEec
Confidence 3444444433 47899998 678888887765443344555543
No 412
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=24.43 E-value=87 Score=21.66 Aligned_cols=20 Identities=20% Similarity=0.239 Sum_probs=17.3
Q ss_pred EEEEeChhHHHHHHHHHhhc
Q 032072 90 ILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 90 ~lvG~S~Gg~~a~~~~~~~~ 109 (148)
.+.|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 78999999999999988543
No 413
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=24.39 E-value=1.6e+02 Score=18.60 Aligned_cols=19 Identities=21% Similarity=0.174 Sum_probs=15.9
Q ss_pred CcEEEEEeChhHHHHHHHH
Q 032072 87 EKVILVGHSAGGLSITQAS 105 (148)
Q Consensus 87 ~~i~lvG~S~Gg~~a~~~~ 105 (148)
.--.+.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 4556789999999999887
No 414
>PF13714 PEP_mutase: Phosphoenolpyruvate phosphomutase; PDB: 1ZLP_A 3EOO_C 1UJQ_D 1O5Q_A 2DUA_A 2HJP_A 2HRW_A 2QIW_A 3KZ2_B 3IH1_B ....
Probab=24.39 E-value=2.5e+02 Score=19.51 Aligned_cols=73 Identities=12% Similarity=0.135 Sum_probs=45.9
Q ss_pred CeEEEE-ccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeC
Q 032072 19 PHFVLV-HGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHS 95 (148)
Q Consensus 19 ~~vl~~-hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S 95 (148)
|+++=+ .||+.+........+.+.+.|..-+.++=..+|. . .....+.+++.+.++...+...+.+ +.+++..
T Consensus 71 Pv~vD~d~GyG~~~~~v~~tv~~~~~aG~agi~IEDq~~~~-~--~~~l~~~ee~~~kI~Aa~~a~~~~~-~~I~ART 144 (238)
T PF13714_consen 71 PVIVDADTGYGNDPENVARTVRELERAGAAGINIEDQRCGH-G--GKQLVSPEEMVAKIRAAVDARRDPD-FVIIART 144 (238)
T ss_dssp EEEEE-TTTSSSSHHHHHHHHHHHHHCT-SEEEEESBSTTT-S--TT-B--HHHHHHHHHHHHHHHSSTT-SEEEEEE
T ss_pred cEEEEcccccCchhHHHHHHHHHHHHcCCcEEEeeccccCC-C--CCceeCHHHHHHHHHHHHHhccCCe-EEEEEec
Confidence 333333 5777768888888888888898877775443342 1 1133688999999999998887434 6666644
No 415
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=24.37 E-value=1.6e+02 Score=20.05 Aligned_cols=31 Identities=26% Similarity=0.241 Sum_probs=20.6
Q ss_pred CeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecC
Q 032072 19 PHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLK 54 (148)
Q Consensus 19 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~ 54 (148)
+.-++++|.|-+.. +..|.+.|+.|+.+|.-
T Consensus 38 ~~rvLvPgCG~g~D-----~~~La~~G~~VvGvDls 68 (218)
T PF05724_consen 38 GGRVLVPGCGKGYD-----MLWLAEQGHDVVGVDLS 68 (218)
T ss_dssp SEEEEETTTTTSCH-----HHHHHHTTEEEEEEES-
T ss_pred CCeEEEeCCCChHH-----HHHHHHCCCeEEEEecC
Confidence 34577788776544 23466688999988854
No 416
>PF04548 AIG1: AIG1 family; InterPro: IPR006703 This entry represents a domain found in Arabidopsis protein AIG1 which appears to be involved in plant resistance to bacteria. The Arabidopsis disease resistance gene RPS2 is involved in recognition of bacterial pathogens carrying the avirulence gene avrRpt2. AIG1 (avrRpt2-induced gene) exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae carrying avrRpt2 []. The domain is also apparently found in a number of mammalian proteins, for example the rat immune-associated nucleotide 4 protein. ; GO: 0005525 GTP binding; PDB: 3LXX_A 3BB4_A 3DEF_A 3BB3_A 2J3E_A 3V70_B 3BB1_A 1H65_B 2XTP_A 3P1J_C ....
Probab=24.31 E-value=1.9e+02 Score=19.36 Aligned_cols=48 Identities=17% Similarity=0.180 Sum_probs=27.7
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChh
Q 032072 44 SGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAG 97 (148)
Q Consensus 44 ~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~G 97 (148)
.|..+.++|-||...+. ...++..+.+.+.+....+...++++-..++
T Consensus 47 ~g~~v~VIDTPGl~d~~------~~~~~~~~~i~~~l~~~~~g~ha~llVi~~~ 94 (212)
T PF04548_consen 47 DGRQVTVIDTPGLFDSD------GSDEEIIREIKRCLSLCSPGPHAFLLVIPLG 94 (212)
T ss_dssp TTEEEEEEE--SSEETT------EEHHHHHHHHHHHHHHTTT-ESEEEEEEETT
T ss_pred cceEEEEEeCCCCCCCc------ccHHHHHHHHHHHHHhccCCCeEEEEEEecC
Confidence 36778899999975432 2345556666666554443445566657777
No 417
>PLN02925 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Probab=23.95 E-value=2.7e+02 Score=22.97 Aligned_cols=40 Identities=13% Similarity=0.270 Sum_probs=29.6
Q ss_pred EEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEE
Q 032072 47 KVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVG 93 (148)
Q Consensus 47 ~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG 93 (148)
..-.+.+||+|++. +++++..+.+.+....++ .-+|.++|
T Consensus 631 kte~isCPgCGRT~------~dlq~~~~~I~~~~~hl~-GvkiavMG 670 (733)
T PLN02925 631 KTEYVSCPSCGRTL------FDLQEVSAEIREKTSHLP-GVSIAIMG 670 (733)
T ss_pred CCeEEECCCCCCcc------ccHHHHHHHHHHHhhcCC-CceEEEEe
Confidence 34566678888643 668888889988888887 55787776
No 418
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=23.86 E-value=2.1e+02 Score=18.50 Aligned_cols=42 Identities=7% Similarity=0.176 Sum_probs=21.2
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhchhh-ceeeE-eccc
Q 032072 76 LMDFMSSLTDNEKVILVGHSAGGLSITQASHKFGNKI-RLAVY-LAAT 121 (148)
Q Consensus 76 ~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i-~~~i~-~~~~ 121 (148)
+.+.++... ..++++|-.+--. -.++.++-+.. .++++ +++.
T Consensus 91 i~~~I~~~~--pdiv~vglG~PkQ--E~~~~~~~~~l~~~v~~~vG~~ 134 (171)
T cd06533 91 IIERINASG--ADILFVGLGAPKQ--ELWIARHKDRLPVPVAIGVGGS 134 (171)
T ss_pred HHHHHHHcC--CCEEEEECCCCHH--HHHHHHHHHHCCCCEEEEecee
Confidence 555665554 5788887444443 33344443443 34333 3443
No 419
>TIGR01285 nifN nitrogenase molybdenum-iron cofactor biosynthesis protein NifN. This protein forms a complex with NifE, and appears as a NifEN in some species. NifEN is a required for producing the molybdenum-iron cofactor of molybdenum-requiring nitrogenases. NifN is closely related to the nitrogenase molybdenum-iron protein beta chain NifK. This model describes most examples of NifN but excludes some cases, such as the putative NifN of Chlorobium tepidum, for which a separate model may be created.
Probab=23.68 E-value=3e+02 Score=21.03 Aligned_cols=68 Identities=9% Similarity=-0.019 Sum_probs=35.9
Q ss_pred hHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHH
Q 032072 34 WYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQA 104 (148)
Q Consensus 34 ~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~ 104 (148)
-..+++.|.+.|..+...-...............-..+...++.+.+++. +.-.++|+|.|..++..+
T Consensus 323 ~~~l~~~l~elGm~v~~~~~~~~~~~~~~~~~~~~~~~D~~~l~~~i~~~---~~dliig~s~~k~~A~~l 390 (432)
T TIGR01285 323 LAAWATFFTSMGAQIVAAVTTTGSPLLQKLPVETVVIGDLEDLEDLACAA---GADLLITNSHGRALAQRL 390 (432)
T ss_pred HHHHHHHHHHCCCEEEEEEeCCCCHHHHhCCcCcEEeCCHHHHHHHHhhc---CCCEEEECcchHHHHHHc
Confidence 34677778888988765544322111111000011112224445555443 466788999998877764
No 420
>COG0743 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism]
Probab=23.65 E-value=1.3e+02 Score=22.53 Aligned_cols=20 Identities=25% Similarity=0.174 Sum_probs=12.6
Q ss_pred CcEEEEEeChhHHHHHHHHH
Q 032072 87 EKVILVGHSAGGLSITQASH 106 (148)
Q Consensus 87 ~~i~lvG~S~Gg~~a~~~~~ 106 (148)
+++-++|-|.|+.+.....+
T Consensus 26 ~~f~vval~ag~n~~~l~~q 45 (385)
T COG0743 26 DKFEVVALAAGKNVELLAEQ 45 (385)
T ss_pred CcEEEEEEecCCcHHHHHHH
Confidence 55666777777766655544
No 421
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=23.63 E-value=1.9e+02 Score=17.77 Aligned_cols=14 Identities=14% Similarity=0.408 Sum_probs=10.0
Q ss_pred HHHHHhCCcEEEEE
Q 032072 38 RCLMENSGYKVSCI 51 (148)
Q Consensus 38 ~~~l~~~~~~v~~~ 51 (148)
...|.+.|+.|+.+
T Consensus 100 ~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 100 NSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHCcCEEEEE
Confidence 34567789998765
No 422
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=23.42 E-value=91 Score=21.60 Aligned_cols=17 Identities=29% Similarity=0.292 Sum_probs=15.3
Q ss_pred EEEEeChhHHHHHHHHH
Q 032072 90 ILVGHSAGGLSITQASH 106 (148)
Q Consensus 90 ~lvG~S~Gg~~a~~~~~ 106 (148)
.+.|-|.|+.++..++.
T Consensus 34 ~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 34 RFAGASAGSLVAAVLLT 50 (246)
T ss_pred EEEEECHHHHHHHHHhc
Confidence 68899999999999974
No 423
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=23.30 E-value=1.8e+02 Score=17.47 Aligned_cols=73 Identities=15% Similarity=0.178 Sum_probs=46.0
Q ss_pred eEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeChhHH
Q 032072 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHSAGGL 99 (148)
Q Consensus 20 ~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~ 99 (148)
.|+.-||- -...+...++.+....-.+.++++. ...+.++..+.+.+.++++...+.++++-==+||.
T Consensus 4 ili~sHG~--~A~gl~~s~~~i~G~~~~i~~i~~~----------~~~~~~~~~~~l~~~i~~~~~~~~vivltDl~GGS 71 (116)
T TIGR00824 4 IIISGHGQ--AAIALLKSAEMIFGEQNNVGAVPFV----------PGENAETLQEKYNAALADLDTEEEVLFLVDIFGGS 71 (116)
T ss_pred EEEEecHH--HHHHHHHHHHHHcCCcCCeEEEEcC----------CCcCHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCC
Confidence 57777884 2223334444444333456666644 12567888899999999886567788777777776
Q ss_pred HHHHH
Q 032072 100 SITQA 104 (148)
Q Consensus 100 ~a~~~ 104 (148)
..-.+
T Consensus 72 p~n~a 76 (116)
T TIGR00824 72 PYNAA 76 (116)
T ss_pred HHHHH
Confidence 54433
No 424
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=23.17 E-value=2.4e+02 Score=18.89 Aligned_cols=25 Identities=8% Similarity=0.259 Sum_probs=20.3
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhh
Q 032072 84 TDNEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 84 ~~~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
....+|.++|-.-.+.++..++.++
T Consensus 39 ~~~~rI~~~G~GgSa~~A~~~a~~l 63 (196)
T PRK10886 39 LNGNKILCCGNGTSAANAQHFAASM 63 (196)
T ss_pred HcCCEEEEEECcHHHHHHHHHHHHH
Confidence 4468999999887788888888765
No 425
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=23.07 E-value=2e+02 Score=20.52 Aligned_cols=33 Identities=15% Similarity=0.103 Sum_probs=24.2
Q ss_pred EEEEccCCCCccchHHHHHHHHhCCcEEEEEec
Q 032072 21 FVLVHGISGGAWCWYKVRCLMENSGYKVSCINL 53 (148)
Q Consensus 21 vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~ 53 (148)
++..+..||.......+++.|.+.|+.|.++..
T Consensus 5 ~~~~p~~gG~~~~~~~la~~L~~~G~~v~v~~~ 37 (371)
T cd04962 5 IVCYPTYGGSGVVATELGKALARRGHEVHFITS 37 (371)
T ss_pred EEEEeCCCCccchHHHHHHHHHhcCCceEEEec
Confidence 444456677777777899999989988876654
No 426
>PRK02048 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Provisional
Probab=22.89 E-value=1.7e+02 Score=23.55 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=29.9
Q ss_pred EEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEE
Q 032072 48 VSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVG 93 (148)
Q Consensus 48 v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG 93 (148)
.-.+.+||+|++ .++.++-.+.+++....++ .-+|.++|
T Consensus 516 TEyISCPsCGRT------LfDLq~tta~Ik~~t~HLk-GlkI~IMG 554 (611)
T PRK02048 516 TEYISCPGCGRT------LYDLQSTIARIKEATSHLK-GLKIGIMG 554 (611)
T ss_pred ceEEECCCCCcc------hhhHHHHHHHHHHHhCCCC-CceEEEEE
Confidence 456667777763 3788888888998888888 67888876
No 427
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=22.87 E-value=59 Score=23.19 Aligned_cols=25 Identities=32% Similarity=0.424 Sum_probs=19.5
Q ss_pred EEEEeChhHHHHHHHHHhhchhhce
Q 032072 90 ILVGHSAGGLSITQASHKFGNKIRL 114 (148)
Q Consensus 90 ~lvG~S~Gg~~a~~~~~~~~~~i~~ 114 (148)
.++|-|+|+.-...|..+.+.+-++
T Consensus 43 ~~~GvSAGA~n~~aYls~Q~gra~~ 67 (292)
T COG4667 43 LVVGVSAGALNLVAYLSKQRGRARR 67 (292)
T ss_pred eeeeecHhHHhHHHHhhcCCchHHH
Confidence 5779999999999998877655443
No 428
>PF04816 DUF633: Family of unknown function (DUF633) ; InterPro: IPR006901 This is a family of uncharacterised bacterial proteins.; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity; PDB: 3LEC_A 3KU1_G 3KR9_A 3GNL_B.
Probab=22.48 E-value=2.6e+02 Score=18.93 Aligned_cols=24 Identities=21% Similarity=0.396 Sum_probs=17.3
Q ss_pred CcEEEEEeChhHHHHHHHHHhhchhh
Q 032072 87 EKVILVGHSAGGLSITQASHKFGNKI 112 (148)
Q Consensus 87 ~~i~lvG~S~Gg~~a~~~~~~~~~~i 112 (148)
+.+++.| |||.+....+...++..
T Consensus 68 d~ivIAG--MGG~lI~~ILe~~~~~~ 91 (205)
T PF04816_consen 68 DTIVIAG--MGGELIIEILEAGPEKL 91 (205)
T ss_dssp -EEEEEE--E-HHHHHHHHHHTGGGG
T ss_pred CEEEEec--CCHHHHHHHHHhhHHHh
Confidence 3566666 99999999998887654
No 429
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=22.31 E-value=1.8e+02 Score=21.25 Aligned_cols=34 Identities=15% Similarity=0.172 Sum_probs=24.9
Q ss_pred EEEccCCC-CccchHHHHHHHHhCCcEEEEEecCC
Q 032072 22 VLVHGISG-GAWCWYKVRCLMENSGYKVSCINLKG 55 (148)
Q Consensus 22 l~~hG~~~-~~~~~~~~~~~l~~~~~~v~~~d~~g 55 (148)
|.+.+... +...+..+.+.+.+.+.+.+++|.-.
T Consensus 2 iYlt~~~a~~~~~~~~~~~~i~~t~lNavVIDvKd 36 (316)
T PF13200_consen 2 IYLTAYSAGSPERLDKLLDLIKRTELNAVVIDVKD 36 (316)
T ss_pred EEechhhcCCHHHHHHHHHHHHhcCCceEEEEEec
Confidence 34555543 34667788888888999999999874
No 430
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=22.24 E-value=2e+02 Score=20.40 Aligned_cols=35 Identities=23% Similarity=0.352 Sum_probs=22.6
Q ss_pred CCCeEEEEccCCCCccc-----hHHHHHHHHhCCcEEEEE
Q 032072 17 QKPHFVLVHGISGGAWC-----WYKVRCLMENSGYKVSCI 51 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~~-----~~~~~~~l~~~~~~v~~~ 51 (148)
.++.|++.||....... |..+++.|.+.++.++..
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~ 217 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLP 217 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEe
Confidence 35678888886654433 456777777667776643
No 431
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=22.20 E-value=2.6e+02 Score=18.91 Aligned_cols=18 Identities=28% Similarity=0.471 Sum_probs=14.9
Q ss_pred CcEEEEEeChhHHHHHHH
Q 032072 87 EKVILVGHSAGGLSITQA 104 (148)
Q Consensus 87 ~~i~lvG~S~Gg~~a~~~ 104 (148)
....++|.|.|+.+....
T Consensus 116 ~G~v~~G~SAGA~i~~~~ 133 (217)
T cd03145 116 GGVVIGGTSAGAAVMSDT 133 (217)
T ss_pred cCCEEEEccHHHHhhhhc
Confidence 467899999999987665
No 432
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=22.09 E-value=1.2e+02 Score=16.54 Aligned_cols=11 Identities=55% Similarity=0.915 Sum_probs=7.6
Q ss_pred CCeEEEEccCC
Q 032072 18 KPHFVLVHGIS 28 (148)
Q Consensus 18 ~~~vl~~hG~~ 28 (148)
.|.++++||..
T Consensus 31 ~~~~~lvhGga 41 (71)
T PF10686_consen 31 HPDMVLVHGGA 41 (71)
T ss_pred CCCEEEEECCC
Confidence 46677888755
No 433
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=21.98 E-value=1e+02 Score=21.87 Aligned_cols=22 Identities=32% Similarity=0.496 Sum_probs=17.3
Q ss_pred cEEEEEeChhHHHHHHHHHhhc
Q 032072 88 KVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 88 ~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
+|++||-+.+|..+..++.+..
T Consensus 3 dV~IvGaG~aGl~~A~~L~~~G 24 (356)
T PF01494_consen 3 DVAIVGAGPAGLAAALALARAG 24 (356)
T ss_dssp EEEEE--SHHHHHHHHHHHHTT
T ss_pred eEEEECCCHHHHHHHHHHHhcc
Confidence 6899999999999888888765
No 434
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=21.95 E-value=3.1e+02 Score=19.70 Aligned_cols=42 Identities=17% Similarity=0.193 Sum_probs=32.9
Q ss_pred CCCCCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCC
Q 032072 15 EVQKPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGS 56 (148)
Q Consensus 15 ~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~ 56 (148)
...+.||++.-|++.+-+.|-..++.+...|-.=++.--||.
T Consensus 149 G~~~kPvLLKRg~~aTieEwL~AAEYI~s~GN~~vILCERGI 190 (286)
T COG2876 149 GRQNKPVLLKRGLSATIEEWLNAAEYILSHGNGNVILCERGI 190 (286)
T ss_pred cccCCCeEEecCccccHHHHHHHHHHHHhCCCCcEEEEeccc
Confidence 346679999999999999999999988877765555555664
No 435
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=21.93 E-value=4e+02 Score=20.97 Aligned_cols=71 Identities=15% Similarity=0.161 Sum_probs=45.4
Q ss_pred CCCeEEEEccCCCCcc--chHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEe
Q 032072 17 QKPHFVLVHGISGGAW--CWYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGH 94 (148)
Q Consensus 17 ~~~~vl~~hG~~~~~~--~~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~ 94 (148)
+.+++|++.|+-++.. ....+...|...|++|..+..|..- +....-+-.+-..++....|.+.=.
T Consensus 38 ~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~~e------------E~~~~flwRfw~~lP~~G~I~IFdR 105 (493)
T TIGR03708 38 GFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPSDE------------ERERPPMWRFWRRLPPKGKIGIFFG 105 (493)
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCCHH------------HhcCcHHHHHHHhCCCCCeEEEEcC
Confidence 5789999999976544 3566778888789999888766321 1111124455566665566776666
Q ss_pred ChhHH
Q 032072 95 SAGGL 99 (148)
Q Consensus 95 S~Gg~ 99 (148)
|.=+-
T Consensus 106 SWY~~ 110 (493)
T TIGR03708 106 SWYTR 110 (493)
T ss_pred cccch
Confidence 65443
No 436
>PRK09065 glutamine amidotransferase; Provisional
Probab=21.78 E-value=1.3e+02 Score=20.73 Aligned_cols=36 Identities=17% Similarity=0.235 Sum_probs=24.2
Q ss_pred hhhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHH
Q 032072 70 DDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQASH 106 (148)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~ 106 (148)
..|...+.++++... ...+=++|.|+|..+...+..
T Consensus 71 ~~w~~~~~~~i~~~~-~~~~PvlGIC~G~Qlla~alG 106 (237)
T PRK09065 71 LDWSERTADWLRQAA-AAGMPLLGICYGHQLLAHALG 106 (237)
T ss_pred chhHHHHHHHHHHHH-HCCCCEEEEChhHHHHHHHcC
Confidence 345566666666654 234668899999988777653
No 437
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=21.78 E-value=97 Score=21.55 Aligned_cols=19 Identities=26% Similarity=0.300 Sum_probs=16.3
Q ss_pred EEEeChhHHHHHHHHHhhc
Q 032072 91 LVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 91 lvG~S~Gg~~a~~~~~~~~ 109 (148)
+.|-|.|+.++..++...+
T Consensus 34 i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 34 ISGASAGALAACCLLCDLP 52 (245)
T ss_pred EEEEcHHHHHHHHHHhCCc
Confidence 8999999999999887543
No 438
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=21.57 E-value=1.7e+02 Score=17.75 Aligned_cols=30 Identities=23% Similarity=0.266 Sum_probs=21.4
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEEeChhHHHH
Q 032072 71 DYNKPLMDFMSSLTDNEKVILVGHSAGGLSI 101 (148)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a 101 (148)
+....+.-.+..+. .+.++++||+--|.+.
T Consensus 44 ~~~~sl~~av~~l~-v~~ivV~gHt~CG~v~ 73 (119)
T cd00382 44 DVLASLEYAVEVLG-VKHIIVCGHTDCGAVK 73 (119)
T ss_pred cHHHHHHHHHHhhC-CCEEEEEccCCCcHHH
Confidence 34455665666666 7899999998777655
No 439
>cd01410 SIRT7 SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span.
Probab=21.41 E-value=2.4e+02 Score=19.03 Aligned_cols=42 Identities=10% Similarity=-0.011 Sum_probs=27.4
Q ss_pred HHhcCCCCcEEEEEeChhHHHHHHHHHhhchhhceeeEeccc
Q 032072 80 MSSLTDNEKVILVGHSAGGLSITQASHKFGNKIRLAVYLAAT 121 (148)
Q Consensus 80 ~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~~~~ 121 (148)
.+.+...+-++++|-|+--.-+..+......+-..++.++.-
T Consensus 150 ~~~~~~aDlllviGTSl~V~pa~~l~~~~~~~g~~vi~iN~~ 191 (206)
T cd01410 150 AAAACRADLFLCLGTSLQVTPAANLPLKAARAGGRLVIVNLQ 191 (206)
T ss_pred HHHHhcCCEEEEECcCceehhHHHHHHHHHhcCCeEEEECCC
Confidence 333333578999999988776666665444444566777653
No 440
>PF12112 DUF3579: Protein of unknown function (DUF3579); InterPro: IPR021969 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 98 to 126 amino acids in length. This protein has a conserved FRP sequence motif. ; PDB: 2L9D_A.
Probab=21.38 E-value=60 Score=18.97 Aligned_cols=34 Identities=9% Similarity=0.064 Sum_probs=18.1
Q ss_pred CCeEEEEccCCCCccchHH--HHHHHHhCCcEEEEEe
Q 032072 18 KPHFVLVHGISGGAWCWYK--VRCLMENSGYKVSCIN 52 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~~~~~--~~~~l~~~~~~v~~~d 52 (148)
++.=++++|.+.+...|++ |+++|.. -...+.++
T Consensus 4 ~~~e~~I~GiT~~Gk~FRPSDWaERL~g-vla~F~~~ 39 (92)
T PF12112_consen 4 NPKEIVIQGITSDGKTFRPSDWAERLCG-VLASFRPD 39 (92)
T ss_dssp ---EEEEEEEETTS-B-S-TTHHHHHHH-TT-EE-SS
T ss_pred CccEEEEEeEcCCCCCcCCccHHHHHHH-HHHccCCC
Confidence 3445788999887777764 8888874 23444333
No 441
>cd05006 SIS_GmhA Phosphoheptose isomerase is a member of the SIS (Sugar ISomerase) superfamily. Phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate into D-glycero-D-mannoheptose 7-phosphate. This is the first step of the biosynthesis of gram-negative bacteria inner core lipopolysaccharide precursor, L-glycero-D-mannoheptose (Gmh).
Probab=21.38 E-value=2.4e+02 Score=18.16 Aligned_cols=23 Identities=9% Similarity=0.320 Sum_probs=16.9
Q ss_pred CCcEEEEEeChhHHHHHHHHHhh
Q 032072 86 NEKVILVGHSAGGLSITQASHKF 108 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~ 108 (148)
.++|+++|-..-+.++..++...
T Consensus 33 ~~~I~i~G~G~S~~~A~~~~~~l 55 (177)
T cd05006 33 GGKILICGNGGSAADAQHFAAEL 55 (177)
T ss_pred CCEEEEEeCcHHHHHHHHHHHHH
Confidence 57899999886677776666544
No 442
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=21.37 E-value=2.5e+02 Score=18.43 Aligned_cols=36 Identities=6% Similarity=-0.025 Sum_probs=20.7
Q ss_pred CCeEEEEccCCC---CccchHHHHHHHHhCCcEEEEEec
Q 032072 18 KPHFVLVHGISG---GAWCWYKVRCLMENSGYKVSCINL 53 (148)
Q Consensus 18 ~~~vl~~hG~~~---~~~~~~~~~~~l~~~~~~v~~~d~ 53 (148)
+.+|++.+.+.. .........+.|.+.|+.++-++.
T Consensus 112 ~~pv~i~PaMn~~M~~~p~~~~nl~~L~~~G~~vi~P~~ 150 (177)
T TIGR02113 112 ETPKLIAPAMNTKMYQNPITQRNIKILKKIGYQEIQPKE 150 (177)
T ss_pred CCCEEEEeCCCHHHhCCHHHHHHHHHHHHCCCEEECCCc
Confidence 446666665442 222344556677777877766653
No 443
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=21.35 E-value=1.7e+02 Score=19.45 Aligned_cols=28 Identities=14% Similarity=0.273 Sum_probs=11.7
Q ss_pred chhhhHHHHHHHHHhcC-CCCcEEEEEeC
Q 032072 68 SFDDYNKPLMDFMSSLT-DNEKVILVGHS 95 (148)
Q Consensus 68 ~~~~~~~~~~~~~~~~~-~~~~i~lvG~S 95 (148)
+.+.|.+.+..++.... ...+++++|-|
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~iv~lGDS 41 (214)
T cd01820 13 GDPRWMSRHERFVAEAKQKEPDVVFIGDS 41 (214)
T ss_pred cchhHHHHHHHHHHHhhcCCCCEEEECch
Confidence 33444444444443321 12344455444
No 444
>PLN03058 dynein light chain type 1 family protein; Provisional
Probab=21.26 E-value=40 Score=21.00 Aligned_cols=34 Identities=18% Similarity=0.089 Sum_probs=22.7
Q ss_pred hhhHHHHHHHHHhcCCCCcEEEEEeChhHHHHHH
Q 032072 70 DDYNKPLMDFMSSLTDNEKVILVGHSAGGLSITQ 103 (148)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~ 103 (148)
.+.+..+...++...+..=-.+||.|+|..++..
T Consensus 69 kdIA~~IKk~fDkkYG~tWHCIVGk~FGs~VTHe 102 (128)
T PLN03058 69 KRLALALKKEFDSAYGPAWHCIVGTSFGSYVTHS 102 (128)
T ss_pred HHHHHHHHHHHhhhhCCceEEEECCcEEEEEEEc
Confidence 5667777777766653333445699999887654
No 445
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=21.01 E-value=59 Score=25.37 Aligned_cols=30 Identities=17% Similarity=0.222 Sum_probs=23.5
Q ss_pred CCcEEEEEeChhHHHHHHHHHhhchhhcee
Q 032072 86 NEKVILVGHSAGGLSITQASHKFGNKIRLA 115 (148)
Q Consensus 86 ~~~i~lvG~S~Gg~~a~~~~~~~~~~i~~~ 115 (148)
.-+-++.|-|+||.+|..++-+..+.++.+
T Consensus 201 LlP~IIsGsS~GaivAsl~~v~~~eEl~~L 230 (543)
T KOG2214|consen 201 LLPNIISGSSAGAIVASLVGVRSNEELKQL 230 (543)
T ss_pred ccchhhcCCchhHHHHHHHhhcchHHHHHH
Confidence 346678899999999999988776666653
No 446
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=20.65 E-value=1.4e+02 Score=20.22 Aligned_cols=23 Identities=9% Similarity=0.228 Sum_probs=16.7
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHH
Q 032072 76 LMDFMSSLTDNEKVILVGHSAGGL 99 (148)
Q Consensus 76 ~~~~~~~~~~~~~i~lvG~S~Gg~ 99 (148)
+.++++... .+++.+|||+-|=.
T Consensus 142 i~~~i~~~~-~~tVLIVGHnp~i~ 164 (201)
T PRK15416 142 IKDLQRKSP-DKNIVIFTHNHCLT 164 (201)
T ss_pred HHHHHHhCC-CCEEEEEeCchhHH
Confidence 355666665 47899999998854
No 447
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=20.61 E-value=81 Score=21.75 Aligned_cols=69 Identities=13% Similarity=0.144 Sum_probs=36.0
Q ss_pred CCeEEEEccCCCCccc--hHHHHHHHHhCCcEEEEEecCCCCCCCCCCCCCcchhhhHHHHHHHHHhcCCCCcEEEEEeC
Q 032072 18 KPHFVLVHGISGGAWC--WYKVRCLMENSGYKVSCINLKGSGTDPSDANSIHSFDDYNKPLMDFMSSLTDNEKVILVGHS 95 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~~--~~~~~~~l~~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lvG~S 95 (148)
.|+||++.|+.++... .+.+...|...|++|.++..|.- .+...--+-.+-..++....+.+.=-|
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~pt~------------eE~~~p~lwRfw~~lP~~G~I~if~rS 97 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKPTD------------EELRRPFLWRFWRALPARGQIGIFDRS 97 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS--H------------HHHTS-TTHHHHTTS--TT-EEEEES-
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCCCh------------hHcCCCcHHHHHHhCCCCCEEEEEecc
Confidence 4689999999876553 33455555556888888775521 111111234556666656667766555
Q ss_pred hhH
Q 032072 96 AGG 98 (148)
Q Consensus 96 ~Gg 98 (148)
+=.
T Consensus 98 WY~ 100 (228)
T PF03976_consen 98 WYE 100 (228)
T ss_dssp GGG
T ss_pred hhh
Confidence 543
No 448
>KOG4153 consensus Fructose 1,6-bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=20.52 E-value=2.8e+02 Score=19.93 Aligned_cols=18 Identities=39% Similarity=0.685 Sum_probs=14.0
Q ss_pred CCCCCeEEEEccCCCCcc
Q 032072 15 EVQKPHFVLVHGISGGAW 32 (148)
Q Consensus 15 ~~~~~~vl~~hG~~~~~~ 32 (148)
...+|+.+++||..++..
T Consensus 254 ~~~KpvFlVfHGgSGssv 271 (358)
T KOG4153|consen 254 KSKKPVFLVFHGGSGSSV 271 (358)
T ss_pred cccCceEEEEeCCCCccH
Confidence 356789999999877665
No 449
>COG3675 Predicted lipase [Lipid metabolism]
Probab=20.51 E-value=91 Score=22.60 Aligned_cols=32 Identities=19% Similarity=0.360 Sum_probs=20.8
Q ss_pred HHHHHHHhcCCCCcEEEEEeChhHHHHHHHHH
Q 032072 75 PLMDFMSSLTDNEKVILVGHSAGGLSITQASH 106 (148)
Q Consensus 75 ~~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~ 106 (148)
....++++.+..-++.++|||.|+.+......
T Consensus 163 q~~~lleeiP~~Yrig~tghS~g~aii~vrGt 194 (332)
T COG3675 163 QEQTLLEEIPQGYRIGITGHSSGGAIICVRGT 194 (332)
T ss_pred HHHHHHHhcccceEEEEEeecCCccEEEEecc
Confidence 34445555553357899999999886654443
No 450
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes the FAD binding domain which has a nested NADH binding domain and is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3IC9_A 1Q1W_A 3LB8_A 1Q1R_B 3GD4_A 1GV4_A 3GD3_A 2EQ9_E 2EQ6_B 2EQ8_E ....
Probab=20.50 E-value=95 Score=20.04 Aligned_cols=28 Identities=21% Similarity=0.408 Sum_probs=20.3
Q ss_pred cEEEEEeChhHHHHHHHHHhhchhhceeeEe
Q 032072 88 KVILVGHSAGGLSITQASHKFGNKIRLAVYL 118 (148)
Q Consensus 88 ~i~lvG~S~Gg~~a~~~~~~~~~~i~~~i~~ 118 (148)
+++++|-+.+|..+...+.+.. ..++++
T Consensus 1 ~vvIIGgG~aGl~aA~~l~~~~---~~v~ii 28 (201)
T PF07992_consen 1 DVVIIGGGPAGLSAALELARPG---AKVLII 28 (201)
T ss_dssp EEEEESSSHHHHHHHHHHHHTT---SEEEEE
T ss_pred CEEEEecHHHHHHHHHHHhcCC---CeEEEE
Confidence 5789999999998888877332 334555
No 451
>PRK15482 transcriptional regulator MurR; Provisional
Probab=20.38 E-value=2.5e+02 Score=19.75 Aligned_cols=34 Identities=15% Similarity=0.190 Sum_probs=22.8
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHhhc
Q 032072 76 LMDFMSSLTDNEKVILVGHSAGGLSITQASHKFG 109 (148)
Q Consensus 76 ~~~~~~~~~~~~~i~lvG~S~Gg~~a~~~~~~~~ 109 (148)
+.++++.+...++|+++|...-+.++..+..+.-
T Consensus 125 l~~~~~~i~~A~~I~i~G~G~S~~~A~~l~~~l~ 158 (285)
T PRK15482 125 LQKIIEVISKAPFIQITGLGGSALVGRDLSFKLM 158 (285)
T ss_pred HHHHHHHHHhCCeeEEEEeChhHHHHHHHHHHHH
Confidence 3344444444678999998877777777766553
No 452
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=20.12 E-value=3.5e+02 Score=20.24 Aligned_cols=39 Identities=23% Similarity=0.170 Sum_probs=25.9
Q ss_pred CCeEEEEccCCCCccchHHHHHHHHhCCcEEEEEecCCC
Q 032072 18 KPHFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLKGS 56 (148)
Q Consensus 18 ~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~g~ 56 (148)
+.++++.-+..+....+..++..|.+.||.|.++...+.
T Consensus 4 ~~~~~~~~~~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~ 42 (415)
T cd03816 4 KRVCVLVLGDIGRSPRMQYHALSLAKHGWKVDLVGYLET 42 (415)
T ss_pred cEEEEEEecccCCCHHHHHHHHHHHhcCceEEEEEecCC
Confidence 445555545555555556688889989999887766543
No 453
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=20.12 E-value=79 Score=20.35 Aligned_cols=35 Identities=23% Similarity=0.210 Sum_probs=21.5
Q ss_pred CCcchhhhHHHH----HHHHHhcC---CCCcEEEEEeChhHH
Q 032072 65 SIHSFDDYNKPL----MDFMSSLT---DNEKVILVGHSAGGL 99 (148)
Q Consensus 65 ~~~~~~~~~~~~----~~~~~~~~---~~~~i~lvG~S~Gg~ 99 (148)
...+.++.++.+ ..+-+... .+++|.|+|=|++..
T Consensus 75 ~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 75 AGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp TTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred CCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 346777888777 33333331 257999999999876
No 454
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.11 E-value=94 Score=21.52 Aligned_cols=18 Identities=22% Similarity=0.423 Sum_probs=15.8
Q ss_pred EEEEeChhHHHHHHHHHh
Q 032072 90 ILVGHSAGGLSITQASHK 107 (148)
Q Consensus 90 ~lvG~S~Gg~~a~~~~~~ 107 (148)
.++|-|.||.++..++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 478999999999999875
No 455
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=20.04 E-value=1.5e+02 Score=21.29 Aligned_cols=35 Identities=11% Similarity=0.174 Sum_probs=25.2
Q ss_pred eEEEEccCCCCccchHHHHHHHHhCCcEEEEEecC
Q 032072 20 HFVLVHGISGGAWCWYKVRCLMENSGYKVSCINLK 54 (148)
Q Consensus 20 ~vl~~hG~~~~~~~~~~~~~~l~~~~~~v~~~d~~ 54 (148)
+++...|.++....+..+++.|.+.|+.|..+-..
T Consensus 4 i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~ 38 (357)
T PRK00726 4 ILLAGGGTGGHVFPALALAEELKKRGWEVLYLGTA 38 (357)
T ss_pred EEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECC
Confidence 34444667777776778999999889988776543
Done!