BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032073
(148 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356527115|ref|XP_003532159.1| PREDICTED: probable cytokinin riboside 5'-monophosphate
phosphoribohydrolase LOGL3-like [Glycine max]
Length = 305
Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 95/130 (73%), Positives = 111/130 (85%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ RFFSARKHGL+D VRN+S D+TAVVALPGG+GTLDE+FEILALIQLERIGS+ PVP
Sbjct: 171 LTFRFFSARKHGLVDAVVRNNSFDKTAVVALPGGIGTLDEVFEILALIQLERIGSKFPVP 230
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
FL+MNYDSFY KLL+FL DCE WGTV+K EVASLWK+C+SNSEAL+YL EFY +SS DK
Sbjct: 231 FLLMNYDSFYSKLLEFLNDCEGWGTVSKGEVASLWKVCNSNSEALAYLEEFYGISSSDKS 290
Query: 135 VHEVNLKSTH 144
+ L ST+
Sbjct: 291 KNVTKLYSTY 300
>gi|225460791|ref|XP_002276560.1| PREDICTED: uncharacterized protein LOC100243479 [Vitis vinifera]
gi|297737525|emb|CBI26726.3| unnamed protein product [Vitis vinifera]
Length = 310
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/131 (74%), Positives = 109/131 (83%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D AVR+ +CDRTAVVALPGG+GTLDE+FEILALIQL+RIGSELPVPFL+
Sbjct: 171 RFFSARKHGLVDAAVRSCNCDRTAVVALPGGIGTLDEVFEILALIQLQRIGSELPVPFLL 230
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVHE 137
MNYDSFY KLLDFL D E WGTV K EV SLWK+C++NSEALSYLAEFYDL D E
Sbjct: 231 MNYDSFYSKLLDFLSDSECWGTVCKGEVESLWKVCNNNSEALSYLAEFYDLPLGDNGKCE 290
Query: 138 VNLKSTHGIVS 148
L + G +S
Sbjct: 291 TGLATASGPIS 301
>gi|255576280|ref|XP_002529033.1| carboxy-lyase, putative [Ricinus communis]
gi|223531513|gb|EEF33344.1| carboxy-lyase, putative [Ricinus communis]
Length = 302
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/128 (75%), Positives = 108/128 (84%), Gaps = 1/128 (0%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D AVRN DRTAVVALPGG+GTLDEMFEILALIQLERIGS LPVPF+V
Sbjct: 175 RFFSARKHGLVDAAVRNTRSDRTAVVALPGGIGTLDEMFEILALIQLERIGSALPVPFIV 234
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL-SSIDKRVH 136
MNYDSFY+KLLDF+ +CEDWGTV+K EV LWKIC+SNSEAL+YL +FY+L SS D+ H
Sbjct: 235 MNYDSFYQKLLDFIQNCEDWGTVSKGEVTPLWKICNSNSEALAYLTDFYNLHSSSDEYGH 294
Query: 137 EVNLKSTH 144
S H
Sbjct: 295 GKMPTSAH 302
>gi|224100075|ref|XP_002311733.1| predicted protein [Populus trichocarpa]
gi|222851553|gb|EEE89100.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/111 (82%), Positives = 104/111 (93%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D AVR+ DRTAVVALPGG+GTLDEMFEIL LIQL+RIGSELPVPFLV
Sbjct: 115 RFFSARKHGLVDAAVRSSCSDRTAVVALPGGIGTLDEMFEILTLIQLQRIGSELPVPFLV 174
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
MNYDS+Y+KLLDFLGDCE+WGTV+K EVASLWKIC++NSEAL+YLA+FY L
Sbjct: 175 MNYDSYYQKLLDFLGDCENWGTVSKGEVASLWKICENNSEALAYLADFYGL 225
>gi|357459921|ref|XP_003600242.1| hypothetical protein MTR_3g055920 [Medicago truncatula]
gi|355489290|gb|AES70493.1| hypothetical protein MTR_3g055920 [Medicago truncatula]
Length = 312
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/132 (73%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D VRN+S D+TAVVALPGG+GTLDE+FE+LALIQLERIGS+LPVPFL+
Sbjct: 181 RFFSARKHGLVDAVVRNNSFDKTAVVALPGGIGTLDELFEMLALIQLERIGSKLPVPFLL 240
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSID-KRVH 136
MNYDSFY KLLDFL CED GTV+K EVASLWK+C+SNSEAL+YLA+FY +SS D +
Sbjct: 241 MNYDSFYSKLLDFLDVCEDRGTVSKGEVASLWKVCNSNSEALAYLADFYCISSGDISQKK 300
Query: 137 EVNLKSTHGIVS 148
E L+STH + S
Sbjct: 301 ETKLQSTHDLPS 312
>gi|357459923|ref|XP_003600243.1| hypothetical protein MTR_3g055920 [Medicago truncatula]
gi|217074988|gb|ACJ85854.1| unknown [Medicago truncatula]
gi|355489291|gb|AES70494.1| hypothetical protein MTR_3g055920 [Medicago truncatula]
Length = 312
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/132 (73%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D VRN+S D+TAVVALPGG+GTLDE+FE+LALIQLERIGS+LPVPFL+
Sbjct: 181 RFFSARKHGLVDAVVRNNSFDKTAVVALPGGIGTLDELFEMLALIQLERIGSKLPVPFLL 240
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSID-KRVH 136
MNYDSFY KLLDFL CED GTV+K EVASLWK+C+SNSEAL+YLA+FY +SS D +
Sbjct: 241 MNYDSFYSKLLDFLDVCEDRGTVSKGEVASLWKVCNSNSEALAYLADFYCISSGDISQKK 300
Query: 137 EVNLKSTHGIVS 148
E L+STH + S
Sbjct: 301 ETKLQSTHDLPS 312
>gi|357459925|ref|XP_003600244.1| hypothetical protein MTR_3g055920 [Medicago truncatula]
gi|355489292|gb|AES70495.1| hypothetical protein MTR_3g055920 [Medicago truncatula]
Length = 176
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/132 (73%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D VRN+S D+TAVVALPGG+GTLDE+FE+LALIQLERIGS+LPVPFL+
Sbjct: 45 RFFSARKHGLVDAVVRNNSFDKTAVVALPGGIGTLDELFEMLALIQLERIGSKLPVPFLL 104
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSID-KRVH 136
MNYDSFY KLLDFL CED GTV+K EVASLWK+C+SNSEAL+YLA+FY +SS D +
Sbjct: 105 MNYDSFYSKLLDFLDVCEDRGTVSKGEVASLWKVCNSNSEALAYLADFYCISSGDISQKK 164
Query: 137 EVNLKSTHGIVS 148
E L+STH + S
Sbjct: 165 ETKLQSTHDLPS 176
>gi|242038951|ref|XP_002466870.1| hypothetical protein SORBIDRAFT_01g015500 [Sorghum bicolor]
gi|241920724|gb|EER93868.1| hypothetical protein SORBIDRAFT_01g015500 [Sorghum bicolor]
Length = 329
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 88/122 (72%), Positives = 106/122 (86%), Gaps = 1/122 (0%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D AVR+ DRTAVVALPGGVGTLDE+FEI+ALIQLERIGS LPVPFL+
Sbjct: 196 RFFSARKHGLVDAAVRSSPTDRTAVVALPGGVGTLDELFEIMALIQLERIGSALPVPFLL 255
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVHE 137
+NYDS+Y KLLDFL DC++WGTVA EV SLWK+CD N EAL YLAEFY++ + D+R ++
Sbjct: 256 LNYDSYYSKLLDFLNDCQEWGTVAPGEVESLWKVCDGNHEALEYLAEFYNVPA-DQRNYQ 314
Query: 138 VN 139
++
Sbjct: 315 IS 316
>gi|449467507|ref|XP_004151464.1| PREDICTED: probable cytokinin riboside 5'-monophosphate
phosphoribohydrolase LOGL9-like [Cucumis sativus]
gi|449524603|ref|XP_004169311.1| PREDICTED: probable cytokinin riboside 5'-monophosphate
phosphoribohydrolase LOGL9-like [Cucumis sativus]
Length = 298
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 107/127 (84%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D AVR+ S DRTA V LPGG+GT DE+FEILALIQL RIGS+LPVPFL+
Sbjct: 172 RFFSARKHGLVDAAVRSCSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPFLL 231
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVHE 137
MNYDSFY KLL+F DCE+WGT+AK EV SLWK+CD+N++A++YL+ FY L D+ +E
Sbjct: 232 MNYDSFYSKLLEFFNDCENWGTLAKGEVDSLWKVCDNNADAVAYLSSFYSLCDQDRVKNE 291
Query: 138 VNLKSTH 144
V L+STH
Sbjct: 292 VGLESTH 298
>gi|156138540|emb|CAO91858.1| putative lysine decarbxylase [Nicotiana tabacum]
Length = 305
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 86/115 (74%), Positives = 103/115 (89%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D VR S +RTAVVALPGG+GTLDE+FEI+ALIQLERIGS+LPVPFL+
Sbjct: 176 RFFSARKHGLVDAVVRCKSSERTAVVALPGGIGTLDEIFEIMALIQLERIGSQLPVPFLL 235
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSID 132
MNYDSFY LL+FL DCE WGTV+K+EV+SLWK+C++NSEAL+YL EFY LS ++
Sbjct: 236 MNYDSFYSNLLEFLNDCEKWGTVSKNEVSSLWKVCNNNSEALAYLTEFYGLSPVE 290
>gi|357115866|ref|XP_003559706.1| PREDICTED: uncharacterized protein LOC100823209 [Brachypodium
distachyon]
Length = 334
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 84/127 (66%), Positives = 101/127 (79%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D VRN S D+TA+VALPGG+GTLDE+FEI+ALIQLERIGS LPVPFL+
Sbjct: 201 RFFSARKHGLVDAVVRNSSTDKTAIVALPGGIGTLDEVFEIMALIQLERIGSALPVPFLL 260
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVHE 137
MNYDS+Y KLL+FL D +WGTVA EVASLWK+C+ N EAL YLA+FY++ + + H
Sbjct: 261 MNYDSYYSKLLEFLNDSTEWGTVAPGEVASLWKVCNGNHEALEYLAQFYNVPAGQRNYHT 320
Query: 138 VNLKSTH 144
H
Sbjct: 321 SPPSKEH 327
>gi|50399936|gb|AAT76324.1| expressed protein [Oryza sativa Japonica Group]
gi|108709566|gb|ABF97361.1| Possible lysine decarboxylase family protein, expressed [Oryza
sativa Japonica Group]
gi|215736866|dbj|BAG95795.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 335
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 83/116 (71%), Positives = 101/116 (87%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D AVRN DRTA++ALPGG+GTLDE+FE++ALIQLERIGS LPVPFL+
Sbjct: 206 RFFSARKHGLVDAAVRNCPTDRTAIIALPGGIGTLDELFEMMALIQLERIGSTLPVPFLL 265
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
+NYDS+Y KLLDFL DCE+WGTVA EVASLWK+C+ N EAL YLA+FY++ ++
Sbjct: 266 LNYDSYYSKLLDFLNDCEEWGTVAPGEVASLWKVCNGNHEALEYLAQFYNVPLAER 321
>gi|125586974|gb|EAZ27638.1| hypothetical protein OsJ_11582 [Oryza sativa Japonica Group]
Length = 318
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 83/116 (71%), Positives = 101/116 (87%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D AVRN DRTA++ALPGG+GTLDE+FE++ALIQLERIGS LPVPFL+
Sbjct: 189 RFFSARKHGLVDAAVRNCPTDRTAIIALPGGIGTLDELFEMMALIQLERIGSTLPVPFLL 248
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
+NYDS+Y KLLDFL DCE+WGTVA EVASLWK+C+ N EAL YLA+FY++ ++
Sbjct: 249 LNYDSYYSKLLDFLNDCEEWGTVAPGEVASLWKVCNGNHEALEYLAQFYNVPLAER 304
>gi|219884091|gb|ACL52420.1| unknown [Zea mays]
Length = 314
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/116 (75%), Positives = 100/116 (86%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D AVR+ S DRTAVVALPGGVGTLDE+FEILALIQLERIGS LPVP L+
Sbjct: 197 RFFSARKHGLVDAAVRSSSTDRTAVVALPGGVGTLDELFEILALIQLERIGSALPVPVLL 256
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
+NYDS+Y KLL+FL DC++WGTVA EVASLWK+CD N EAL YLAEFY + ++
Sbjct: 257 LNYDSYYSKLLEFLNDCQEWGTVAPGEVASLWKVCDGNHEALEYLAEFYGVPHNER 312
>gi|125544668|gb|EAY90807.1| hypothetical protein OsI_12409 [Oryza sativa Indica Group]
Length = 318
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 83/116 (71%), Positives = 101/116 (87%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D AVRN DRTA++ALPGG+GTLDE+FE++ALIQLERIGS LPVPFL+
Sbjct: 189 RFFSARKHGLVDAAVRNCPTDRTAIIALPGGIGTLDELFEMMALIQLERIGSTLPVPFLL 248
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
+NYDS+Y KLLDFL DCE+WGTVA EVASLWK+C+ N EAL YLA+FY++ ++
Sbjct: 249 LNYDSYYSKLLDFLNDCEEWGTVAPGEVASLWKVCNGNHEALEYLAQFYNVPLAER 304
>gi|226499120|ref|NP_001150828.1| decarboxylase family protein [Zea mays]
gi|195642216|gb|ACG40576.1| decarboxylase family protein [Zea mays]
Length = 314
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/116 (75%), Positives = 100/116 (86%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D AVR+ S DRTAVVALPGGVGTLDE+FEILALIQLERIGS LPVP L+
Sbjct: 197 RFFSARKHGLVDAAVRSSSTDRTAVVALPGGVGTLDELFEILALIQLERIGSALPVPVLL 256
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
+NYDS+Y KLL+FL DC++WGTVA EVASLWK+CD N EAL YLAEFY + ++
Sbjct: 257 LNYDSYYSKLLEFLNDCQEWGTVAPGEVASLWKVCDGNHEALEYLAEFYGVPHNER 312
>gi|297601231|ref|NP_001050575.2| Os03g0587100 [Oryza sativa Japonica Group]
gi|50399935|gb|AAT76323.1| expressed protein [Oryza sativa Japonica Group]
gi|255674661|dbj|BAF12489.2| Os03g0587100 [Oryza sativa Japonica Group]
Length = 174
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 83/117 (70%), Positives = 101/117 (86%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D AVRN DRTA++ALPGG+GTLDE+FE++ALIQLERIGS LPVPFL+
Sbjct: 45 RFFSARKHGLVDAAVRNCPTDRTAIIALPGGIGTLDELFEMMALIQLERIGSTLPVPFLL 104
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
+NYDS+Y KLLDFL DCE+WGTVA EVASLWK+C+ N EAL YLA+FY++ ++
Sbjct: 105 LNYDSYYSKLLDFLNDCEEWGTVAPGEVASLWKVCNGNHEALEYLAQFYNVPLAERN 161
>gi|414871616|tpg|DAA50173.1| TPA: hypothetical protein ZEAMMB73_787836 [Zea mays]
gi|414871617|tpg|DAA50174.1| TPA: decarboxylase family protein, mRNA isoform 2 [Zea mays]
Length = 162
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 87/117 (74%), Positives = 100/117 (85%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D AVR+ S DRTAVVALPGGVGTLDE+FEILALIQLERIGS LPVP L+
Sbjct: 45 RFFSARKHGLVDAAVRSSSTDRTAVVALPGGVGTLDELFEILALIQLERIGSALPVPVLL 104
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
+NYDS+Y KLL+FL DC++WGTVA EVASLWK+CD N EAL YLAEFY + ++
Sbjct: 105 LNYDSYYSKLLEFLNDCQEWGTVAPGEVASLWKVCDGNHEALEYLAEFYGVPHNERE 161
>gi|224035267|gb|ACN36709.1| unknown [Zea mays]
Length = 297
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 87/116 (75%), Positives = 100/116 (86%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D AVR+ S DRTAVVALPGGVGTLDE+FEILALIQLERIGS LPVP L+
Sbjct: 180 RFFSARKHGLVDAAVRSSSTDRTAVVALPGGVGTLDELFEILALIQLERIGSALPVPVLL 239
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
+NYDS+Y KLL+FL DC++WGTVA EVASLWK+CD N EAL YLAEFY + ++
Sbjct: 240 LNYDSYYSKLLEFLNDCQEWGTVAPGEVASLWKVCDGNHEALEYLAEFYGVPHNER 295
>gi|18403121|ref|NP_564577.1| putative lysine decarboxylase [Arabidopsis thaliana]
gi|16649027|gb|AAL24365.1| unknown protein [Arabidopsis thaliana]
gi|20260046|gb|AAM13370.1| unknown protein [Arabidopsis thaliana]
gi|332194444|gb|AEE32565.1| putative lysine decarboxylase [Arabidopsis thaliana]
Length = 306
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/126 (65%), Positives = 106/126 (84%), Gaps = 1/126 (0%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D +RN+ ++TA++ALPGG+GTLDEMFEILALIQLERIGS LPVPF+V
Sbjct: 177 RFFSARKHGLVDAVIRNNVSEKTAIIALPGGIGTLDEMFEILALIQLERIGSALPVPFIV 236
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVHE 137
MNYD+FY KLL+F+ CE+ GTV+K EV++LWK+C++N EAL+YLAEFYDL ++ E
Sbjct: 237 MNYDAFYSKLLEFIETCENLGTVSKGEVSALWKVCNNNFEALTYLAEFYDLPDGSAKL-E 295
Query: 138 VNLKST 143
L+ T
Sbjct: 296 TELRKT 301
>gi|102140032|gb|ABF70163.1| hypothetical protein MA4_112I10.52 [Musa acuminata]
Length = 208
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/126 (67%), Positives = 101/126 (80%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D AVRN+ D TAVVALPGG+GTLDE+FEILALIQLERIGS+ PVPFL+
Sbjct: 79 RFFSARKHGLVDAAVRNNPSDMTAVVALPGGIGTLDEVFEILALIQLERIGSKFPVPFLL 138
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVHE 137
MNYDSFY KLLDFL D WGTVA+ EV +LWK+C NSEA YLAEFY L ++
Sbjct: 139 MNYDSFYSKLLDFLDDSGKWGTVARGEVEALWKVCGGNSEASDYLAEFYGLPQTKMNNNK 198
Query: 138 VNLKST 143
++++ +
Sbjct: 199 ISVEGS 204
>gi|12322326|gb|AAG51182.1|AC079279_3 unknown protein [Arabidopsis thaliana]
Length = 675
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 75/111 (67%), Positives = 97/111 (87%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
+ + RKHGL+D +RN+ ++TA++ALPGG+GTLDEMFEILALIQLERIGS LPVPF+V
Sbjct: 172 NYHTCRKHGLVDAVIRNNVSEKTAIIALPGGIGTLDEMFEILALIQLERIGSALPVPFIV 231
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
MNYD+FY KLL+F+ CE+ GTV+K EV++LWK+C++N EAL+YLAEFYDL
Sbjct: 232 MNYDAFYSKLLEFIETCENLGTVSKGEVSALWKVCNNNFEALTYLAEFYDL 282
>gi|294463775|gb|ADE77412.1| unknown [Picea sitchensis]
Length = 317
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 76/117 (64%), Positives = 95/117 (81%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D AVRN+ D T ++ALPGG+GTLDE+FE+L LIQLERIGS+ PVPF++
Sbjct: 191 RFFSARKHGLVDAAVRNNLTDHTTIIALPGGIGTLDEIFEVLTLIQLERIGSKHPVPFIL 250
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
MNYD FY KLL F+ CE+WGTV+ EV SLWK+C+ N EAL YLA+FYD+ ++
Sbjct: 251 MNYDGFYSKLLQFIDTCENWGTVSHGEVDSLWKVCNCNLEALEYLADFYDIPESRRK 307
>gi|302801776|ref|XP_002982644.1| hypothetical protein SELMODRAFT_116789 [Selaginella moellendorffii]
gi|300149743|gb|EFJ16397.1| hypothetical protein SELMODRAFT_116789 [Selaginella moellendorffii]
Length = 220
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 78/117 (66%), Positives = 94/117 (80%), Gaps = 2/117 (1%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D VRN DRTA +ALPGGVG+LDE+FE+L LIQL RIGS PVPFL+
Sbjct: 106 RFFSARKHGLVDAGVRNAPSDRTAFLALPGGVGSLDEIFEVLTLIQLRRIGSSFPVPFLL 165
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
+NYD FY LL+FL C +WGTVA+ EV +LW++C +NSEAL YLAEFY +S D+R
Sbjct: 166 INYDGFYDHLLEFLATCREWGTVAEGEVEALWRVCRNNSEALDYLAEFYSIS--DRR 220
>gi|297852756|ref|XP_002894259.1| hypothetical protein ARALYDRAFT_314445 [Arabidopsis lyrata subsp.
lyrata]
gi|297340101|gb|EFH70518.1| hypothetical protein ARALYDRAFT_314445 [Arabidopsis lyrata subsp.
lyrata]
Length = 672
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 75/111 (67%), Positives = 95/111 (85%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
+ + RKHGL+D +RN D+TA++ALPGG+GTLDEMFEILALIQL+RIGS L VPF+V
Sbjct: 169 NYHTCRKHGLVDAVIRNSVSDKTAIIALPGGIGTLDEMFEILALIQLKRIGSALLVPFIV 228
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
MNYDSFY KLL+F+ CE+ GTV+K EV++LWK+C++N EAL+YLAEFYDL
Sbjct: 229 MNYDSFYSKLLEFIETCENLGTVSKGEVSALWKVCNNNFEALTYLAEFYDL 279
>gi|302798809|ref|XP_002981164.1| hypothetical protein SELMODRAFT_113730 [Selaginella moellendorffii]
gi|300151218|gb|EFJ17865.1| hypothetical protein SELMODRAFT_113730 [Selaginella moellendorffii]
Length = 220
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/112 (67%), Positives = 91/112 (81%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D VRN DRTA +ALPGGVG+LDE+FE+L LIQL RIGS PVPFL+
Sbjct: 106 RFFSARKHGLVDAGVRNAPSDRTAFLALPGGVGSLDEIFEVLTLIQLRRIGSSFPVPFLL 165
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
+NYD FY LL+FL C +WGTVA+ EV +LW++C +NSEAL YLAEFY +S
Sbjct: 166 INYDGFYDHLLEFLATCREWGTVAEGEVEALWRVCRNNSEALDYLAEFYGIS 217
>gi|29369205|gb|AAO72685.1| unknown [Oryza sativa Japonica Group]
Length = 186
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 74/111 (66%), Positives = 93/111 (83%), Gaps = 1/111 (0%)
Query: 24 KHGLIDCAVRNDS-CDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDS 82
KHGL+D A + DRTA++ALPGG+GTLDE+FE++ALIQLERIGS LPVPFL++NYDS
Sbjct: 62 KHGLVDAAGAGTAPTDRTAIIALPGGIGTLDELFEMMALIQLERIGSTLPVPFLLLNYDS 121
Query: 83 FYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
+Y KLLDFL DCE+WGTVA EVASLWK+C+ N EAL YLA+FY++ ++
Sbjct: 122 YYSKLLDFLNDCEEWGTVAPGEVASLWKVCNGNHEALEYLAQFYNVPLAER 172
>gi|168024057|ref|XP_001764553.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684131|gb|EDQ70535.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 169
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 88/116 (75%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFF+ARKHGL++ VRN+ DRTA + LPGG+GTLDE+FE++AL QL+RIGS PVPFL+
Sbjct: 45 RFFTARKHGLVEAGVRNNVPDRTAFICLPGGMGTLDELFEVVALKQLDRIGSSFPVPFLI 104
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
+NYD+FY LL FL CEDWGTV E S+ + SN +AL YLA+FY +S D+
Sbjct: 105 LNYDNFYTDLLKFLTKCEDWGTVRAGEFESICHVSTSNLDALEYLADFYGISEQDR 160
>gi|255081330|ref|XP_002507887.1| predicted protein [Micromonas sp. RCC299]
gi|226523163|gb|ACO69145.1| predicted protein [Micromonas sp. RCC299]
Length = 216
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/109 (61%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
FFSARKHGL+D VRN DRTA ALPGGVGTLDE+FE+LAL+QL RIGS PVPF+VM
Sbjct: 103 FFSARKHGLVDAGVRNTPDDRTAFFALPGGVGTLDEIFEVLALLQLRRIGSAHPVPFVVM 162
Query: 79 NYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
NYD Y LL FL D +G++ + E+ W+ C +N EAL+YL EFY
Sbjct: 163 NYDGCYDGLLQFLERDMVRYGSLREHELEPHWRACRTNEEALAYLHEFY 211
>gi|308802682|ref|XP_003078654.1| unnamed protein product [Ostreococcus tauri]
gi|116057107|emb|CAL51534.1| unnamed protein product [Ostreococcus tauri]
Length = 260
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RFFSARKHGL+D A R DRTA VALPGGVGTLDE+FEILAL+QL+R+ + VPFL
Sbjct: 149 RFFSARKHGLVDAATRATKRDRTAFVALPGGVGTLDEIFEILALVQLKRLDTAHEVPFLF 208
Query: 78 MNYDSFYKKLLDFLG-DCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
MNYD Y LLDFL D +G V +E+ L+ CD+N +AL+YL +FY+L
Sbjct: 209 MNYDGCYAGLLDFLKRDLASYGAVTTEELEDLFVACDTNEDALAYLKKFYNL 260
>gi|145345352|ref|XP_001417178.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577405|gb|ABO95471.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 223
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 87/115 (75%), Gaps = 1/115 (0%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ FFSARKHGL+D VR+ ++T VALPGGVGTLDE+FEILAL+QL+RIG+ PVP
Sbjct: 109 LNTSFFSARKHGLVDAGVRSALEEKTCFVALPGGVGTLDEIFEILALLQLKRIGTSHPVP 168
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
F+VMNYD Y LL+FL D +G +A++E+A W CD+N +AL++L +FY +
Sbjct: 169 FIVMNYDGCYDGLLEFLRRDMVGYGALAENELAPHWIACDTNEQALAHLRDFYSI 223
>gi|412988744|emb|CCO15335.1| unknown [Bathycoccus prasinos]
Length = 286
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 78/121 (64%), Gaps = 2/121 (1%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCD-RTAVVALPGGVGTLDEMFEILALIQLERIG 68
ESQ FFSARKHGL+D VRN D +TA LPGG+GT+DE EIL L QL RIG
Sbjct: 166 NESQYATCSFFSARKHGLVDAGVRNGKEDTKTAFFCLPGGIGTMDEFAEILTLFQLRRIG 225
Query: 69 SELPVPFLVMNYDSFYKKLLDFLG-DCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
SE VPFL+MNYD + KLL+F+ C + G V + E+ K+C +N EAL YL FY
Sbjct: 226 SEEKVPFLLMNYDGVFDKLLEFITVSCVEHGLVNEGEMEEHLKVCSTNEEALEYLKHFYA 285
Query: 128 L 128
L
Sbjct: 286 L 286
>gi|303277569|ref|XP_003058078.1| lysine decarboxylase [Micromonas pusilla CCMP1545]
gi|226460735|gb|EEH58029.1| lysine decarboxylase [Micromonas pusilla CCMP1545]
Length = 289
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
FFSARKHGL+D +R + DRTA ALPGGVGTLDE+FE+LAL+QL RIGS VPF+VM
Sbjct: 177 FFSARKHGLVDAGIRANKTDRTAFFALPGGVGTLDEIFEVLALLQLRRIGSAHKVPFVVM 236
Query: 79 NYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
NYD + L+ FL D +G++ E+ W +CD N+ A+ YL FY
Sbjct: 237 NYDGCFDGLIKFLEDDMVRYGSLRDKELEPHWVVCDDNAAAMKYLETFY 285
>gi|255073401|ref|XP_002500375.1| kinase/lysine decarboxylase [Micromonas sp. RCC299]
gi|226515638|gb|ACO61633.1| kinase/lysine decarboxylase [Micromonas sp. RCC299]
Length = 610
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 74/115 (64%), Gaps = 1/115 (0%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
+F S RK L+D VR S DRTA V LPGG+GT+DE+FE+ L QL ++G++ PVP ++
Sbjct: 494 KFLSPRKVALVDAGVRKKSEDRTAYVFLPGGLGTMDELFELFTLYQLHKLGTDHPVPVII 553
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSID 132
+NYD FY LLDF+ + GTV E + + ++N E + YL ++Y++ D
Sbjct: 554 VNYDGFYDCLLDFVNTMQGHGTVGAGEYDQMV-VKNTNDEVVDYLKQYYNIEGHD 607
>gi|307105960|gb|EFN54207.1| hypothetical protein CHLNCDRAFT_24809 [Chlorella variabilis]
Length = 182
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
R+ S+RK L+D VR DRTA + LPGG+GT+DE+FEIL L+QL+++GS+ PVP ++
Sbjct: 43 RYLSSRKVALVDSGVRMKESDRTAYLFLPGGLGTMDELFEILTLVQLKKLGSKYPVPVVL 102
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
++YD FY LL FL C+ GTV E+ L + N+ L L +Y
Sbjct: 103 VDYDGFYGGLLQFLRACDTNGTVGAQELKDLI-VAQDNAGVLDVLQNYY 150
>gi|255072227|ref|XP_002499788.1| ribokinase kinase [Micromonas sp. RCC299]
gi|226515050|gb|ACO61046.1| ribokinase kinase [Micromonas sp. RCC299]
Length = 595
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
+F S RK L+D VR + DRTA V LPGG+GT+DE+FE+ L QL ++G++ PVP ++
Sbjct: 486 KFLSPRKVALVDAGVRKKAEDRTAYVFLPGGLGTMDELFELFTLYQLHKLGTDHPVPVII 545
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
+NYD FY LL+F+ + GTV E + + ++N E + YL E+Y +
Sbjct: 546 VNYDGFYDCLLNFVETMQGHGTVGAGEYDQM-VVKNTNEEVVEYLREYYQI 595
>gi|159463816|ref|XP_001690138.1| lysine decarboxylase-like protein [Chlamydomonas reinhardtii]
gi|158284126|gb|EDP09876.1| lysine decarboxylase-like protein [Chlamydomonas reinhardtii]
Length = 158
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
++ RK L D VR RTA V LPGG+GT+DE+F IL L+QL ++GS LPVP L+
Sbjct: 44 KYMPTRKVALTDAGVRLLPEQRTAYVFLPGGLGTMDELFSILTLMQLGKLGSSLPVPLLI 103
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
+N+D FY L+ L + G + EV + + ++N E L YLA+FY L
Sbjct: 104 VNWDGFYDGLMSLLTAFDQTGALHASEVRQVM-VANTNDEVLEYLAQFYQL 153
>gi|302844949|ref|XP_002954014.1| hypothetical protein VOLCADRAFT_47065 [Volvox carteri f.
nagariensis]
gi|300260826|gb|EFJ45043.1| hypothetical protein VOLCADRAFT_47065 [Volvox carteri f.
nagariensis]
Length = 157
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
++ ARK L D R RTA + LPGG+GT+DE+F IL L+QL ++G+ LPVP ++
Sbjct: 44 KYLPARKVALTDAGARQRPDQRTAYLFLPGGLGTMDELFSILTLLQLGKLGTALPVPLVI 103
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSS 130
+N++ FY LL L + + G + EV + + +N E L YLA FY+L +
Sbjct: 104 VNWNGFYDGLLQLLREFDQTGALKASEVRQVM-VARTNDEVLEYLASFYELPA 155
>gi|412989135|emb|CCO15726.1| predicted protein [Bathycoccus prasinos]
Length = 630
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
R+ + RK L D VR D+TA + LPGG+G++DE FE+ L+QL+++GSE VP ++
Sbjct: 521 RYLAPRKVALTDAGVRKTKEDKTAYIFLPGGLGSMDEFFELYTLVQLKKLGSEHKVPIIL 580
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
+NYD FY LL F+ + GTV ++++ + ++N E + +L FY L
Sbjct: 581 VNYDGFYDCLLTFIKTMIEQGTVGENDI-TFITCLNTNDEVVDFLKSFYSL 630
>gi|384248762|gb|EIE22245.1| putative lysine decarboxylase, partial [Coccomyxa subellipsoidea
C-169]
Length = 183
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 52/74 (70%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
RF S+RK L+D VR DRTA + LPGG+GT+DE+FEIL L+QL ++GS+ VP ++
Sbjct: 109 RFLSSRKVALVDAGVRASESDRTAYIFLPGGLGTMDELFEILTLMQLNKLGSKHTVPLIL 168
Query: 78 MNYDSFYKKLLDFL 91
NYD FY L+ L
Sbjct: 169 CNYDGFYSGLIGLL 182
>gi|327399479|ref|YP_004340348.1| hypothetical protein Hipma_1332 [Hippea maritima DSM 10411]
gi|327182108|gb|AEA34289.1| Conserved hypothetical protein CHP00730 [Hippea maritima DSM 10411]
Length = 223
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 18/122 (14%)
Query: 1 MLSPKVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILA 60
ML+P V +D R+F RK + AV + V +PGG GT+DE+FE L
Sbjct: 109 MLNPYVNIP-----LDFRYFFTRKVTFMKYAV--------SFVVMPGGYGTMDELFESLV 155
Query: 61 LIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALS 120
LIQ ++IG PV V+ F+ K++D + D G ++K ++ SL+KI DS EA+S
Sbjct: 156 LIQTDKIG-RFPV---VLFGSEFWNKVVDLVSFLADRGYISKTDL-SLFKITDSVEEAVS 210
Query: 121 YL 122
Y+
Sbjct: 211 YV 212
>gi|120611957|ref|YP_971635.1| hypothetical protein Aave_3301 [Acidovorax citrulli AAC00-1]
gi|120590421|gb|ABM33861.1| conserved hypothetical protein 730 [Acidovorax citrulli AAC00-1]
Length = 301
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE+L L+Q G PVP ++ + F+KKL++F E GT+
Sbjct: 220 ALVAFPGGFGTLDELFEVLTLVQ---TGKARPVPIVLFGTE-FWKKLVNFDALVEQ-GTI 274
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ D++ +L++ D EA ++ FY L
Sbjct: 275 SADDL-NLFRHTDDPEEAWGFIKAFYKL 301
>gi|94971433|ref|YP_593481.1| hypothetical protein Acid345_4407 [Candidatus Koribacter versatilis
Ellin345]
gi|94553483|gb|ABF43407.1| conserved hypothetical protein 730 [Candidatus Koribacter
versatilis Ellin345]
Length = 318
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GT DE+FEIL L Q E++ ++ F+V+ ++KK+++F D G +
Sbjct: 219 ALVIFPGGFGTFDELFEILTLAQTEKMAKKI---FVVIYGTEYWKKVINFQAFV-DAGAI 274
Query: 101 AKDEVASLWKICDSNSEALSYL 122
A D++ +L+K CD EA YL
Sbjct: 275 APDDL-NLFKFCDDPQEAFEYL 295
>gi|420240708|ref|ZP_14744910.1| putative Rossmann fold nucleotide-binding protein [Rhizobium sp.
CF080]
gi|398075463|gb|EJL66576.1| putative Rossmann fold nucleotide-binding protein [Rhizobium sp.
CF080]
Length = 288
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 58/88 (65%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AVV PGG GTLDEMFE L LIQ +R+ +P L++ ++F++ +++F G ++GT+
Sbjct: 205 AVVVFPGGFGTLDEMFEALTLIQTKRM-ERIP---LILFSEAFWRGIINF-GALAEFGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
A D++ ++ ++ EA +++FYD+
Sbjct: 260 APDDL-NVINFVETAEEAWKIISDFYDI 286
>gi|85709357|ref|ZP_01040422.1| predicted Rossmann fold nucleotide-binding protein [Erythrobacter
sp. NAP1]
gi|85688067|gb|EAQ28071.1| predicted Rossmann fold nucleotide-binding protein [Erythrobacter
sp. NAP1]
Length = 290
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GT DE+FE+L LIQ G P+P ++ D F+++++DF E+ GT+
Sbjct: 207 AVAVFPGGFGTFDELFELLTLIQ---TGKMKPIPIMLFGKD-FWERVVDFEAIAEE-GTI 261
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
AK ++ L+ C++ EA +++FY+L
Sbjct: 262 AKSDL-DLFSWCETAEEAWDCVSKFYEL 288
>gi|264677510|ref|YP_003277416.1| hypothetical protein CtCNB1_1374 [Comamonas testosteroni CNB-2]
gi|262208022|gb|ACY32120.1| conserved hypothetical protein [Comamonas testosteroni CNB-2]
Length = 292
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GT+DE+FE+L L+Q + PVP ++ + F+K++L+F E+
Sbjct: 206 ALVAFPGGFGTMDELFEVLTLVQTHK---SKPVPVILFGTE-FWKRVLNFDVLVEEGTIS 261
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
AKD +L++ D +EA S++ +FY
Sbjct: 262 AKD--LNLFRYTDDPAEAWSFIQQFYQ 286
>gi|222110573|ref|YP_002552837.1| hypothetical protein Dtpsy_1373 [Acidovorax ebreus TPSY]
gi|221730017|gb|ACM32837.1| conserved hypothetical protein [Acidovorax ebreus TPSY]
Length = 287
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDE+FE+L L+Q G PVP ++ +F+KKL++F E GT+
Sbjct: 206 ALVLFPGGFGTLDELFEVLTLVQ---TGKAKPVPIVLFGV-AFWKKLINFEALVEQ-GTI 260
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ +++ L+ D +EA S + FY+L
Sbjct: 261 SPEDL-QLFHYTDDPAEAWSIIRTFYEL 287
>gi|121594828|ref|YP_986724.1| hypothetical protein Ajs_2487 [Acidovorax sp. JS42]
gi|120606908|gb|ABM42648.1| conserved hypothetical protein 730 [Acidovorax sp. JS42]
Length = 287
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDE+FE+L L+Q G PVP ++ +F+KKL++F E GT+
Sbjct: 206 ALVLFPGGFGTLDELFEVLTLVQ---TGKAKPVPIVLFGV-AFWKKLINFEALVEQ-GTI 260
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ +++ L+ D +EA S + FY+L
Sbjct: 261 SPEDL-QLFHYTDDPAEAWSIIRTFYEL 287
>gi|418531404|ref|ZP_13097318.1| hypothetical protein CTATCC11996_16980 [Comamonas testosteroni ATCC
11996]
gi|371451358|gb|EHN64396.1| hypothetical protein CTATCC11996_16980 [Comamonas testosteroni ATCC
11996]
Length = 292
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GT+DE+FE+L L+Q + PVP ++ + F+K++L+F E+
Sbjct: 206 ALVAFPGGFGTMDELFEVLTLVQTHK---SKPVPVILFGTE-FWKRVLNFDVLVEEGTIS 261
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
AKD +L++ D +EA S++ +FY
Sbjct: 262 AKD--LNLFRYTDDPAEAWSFIQQFYQ 286
>gi|299529117|ref|ZP_07042565.1| hypothetical protein CTS44_00092 [Comamonas testosteroni S44]
gi|298722873|gb|EFI63782.1| hypothetical protein CTS44_00092 [Comamonas testosteroni S44]
Length = 292
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GT+DE+FE+L L+Q + PVP ++ + F+K++L+F E+
Sbjct: 206 ALVAFPGGFGTMDELFEVLTLVQTHK---SKPVPVILFGTE-FWKRVLNFDVLVEEGTIS 261
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
AKD +L++ D +EA S++ +FY
Sbjct: 262 AKD--LNLFRYTDDPAEAWSFIQQFYQ 286
>gi|85374879|ref|YP_458941.1| hypothetical protein ELI_10260 [Erythrobacter litoralis HTCC2594]
gi|84787962|gb|ABC64144.1| hypothetical protein ELI_10260 [Erythrobacter litoralis HTCC2594]
Length = 299
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GT DE FE+L LIQ G P+P L+ D F+ ++++F E+ GT+
Sbjct: 216 AVAVFPGGFGTFDEFFELLTLIQ---TGKMKPMPILLFGKD-FWTRVVNFEAIAEE-GTI 270
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+K ++ L C++ EA ++A+FYD+
Sbjct: 271 SKQDL-DLITWCETADEAWGHIADFYDI 297
>gi|221068287|ref|ZP_03544392.1| conserved hypothetical protein [Comamonas testosteroni KF-1]
gi|220713310|gb|EED68678.1| conserved hypothetical protein [Comamonas testosteroni KF-1]
Length = 292
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GT+DE+FE+L L+Q + PVP ++ + F+K++L+F E+
Sbjct: 206 ALVAFPGGFGTMDELFEVLTLVQTHK---SKPVPVILFGTE-FWKRVLNFDVLVEEGTIS 261
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
AKD +L++ D +EA S++ +FY
Sbjct: 262 AKD--LNLFRYTDDPAEAWSFIQQFYQ 286
>gi|154334412|ref|XP_001562183.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060474|emb|CAM42021.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 332
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 17/125 (13%)
Query: 2 LSPKVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILAL 61
L+P V E + +F RK ++ SC A+V PGG GTLDE+FE+L L
Sbjct: 214 LNPHV---TEGLAFEFHYFFTRKFWMMY------SC--RAIVVAPGGFGTLDEIFELLTL 262
Query: 62 IQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSY 121
Q ++I S LPV L F+K ++++ D+G +++DE+ SL DS EA+ +
Sbjct: 263 KQTKKIPS-LPVVLLC---KQFWKTVVNWQA-LADYGVISQDEIDSLL-FTDSADEAIEH 316
Query: 122 LAEFY 126
+ EFY
Sbjct: 317 IKEFY 321
>gi|85711443|ref|ZP_01042501.1| Predicted Rossmann fold nucleotide-binding protein [Idiomarina
baltica OS145]
gi|85694595|gb|EAQ32535.1| Predicted Rossmann fold nucleotide-binding protein [Idiomarina
baltica OS145]
Length = 296
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 6/93 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VALPGG GTLDE+FE L LIQ ++I PVP +++ F+ KL++F E+ G +
Sbjct: 210 ALVALPGGYGTLDELFETLTLIQTKKID---PVPIVLIG-KGFWSKLINFDLLIEE-GLI 264
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
A D+V L+ + ++ EA +++ Y+LS K
Sbjct: 265 APDDV-KLFTLVNTAEEAWAHICRCYELSEGSK 296
>gi|408379928|ref|ZP_11177519.1| lysine decarboxylase [Agrobacterium albertimagni AOL15]
gi|407746305|gb|EKF57830.1| lysine decarboxylase [Agrobacterium albertimagni AOL15]
Length = 292
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 16/115 (13%)
Query: 16 DLRFFSARK-HGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ +F+ RK H L+ A+ PGG GTLDE FE + LIQ +R+ P+P
Sbjct: 188 NFHYFAIRKMHFLMRA---------KAITIFPGGFGTLDEFFETITLIQTKRMA---PIP 235
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
L++ +F++ +++F +GT+A D++ L++ ++ EA +A+FYDL+
Sbjct: 236 -LILFSRAFWEDIVNFEA-LAAFGTIAPDDL-KLFQFAETAEEAWKIIADFYDLN 287
>gi|222147376|ref|YP_002548333.1| hypothetical protein Avi_0471 [Agrobacterium vitis S4]
gi|221734366|gb|ACM35329.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 292
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDEMFE + LIQ +R+ P+P ++ + F+ +++DF ++GT+
Sbjct: 205 AIVVFPGGFGTLDEMFEAVTLIQTKRMA---PIPLILFGRE-FWHRIIDF-DSLAEFGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSID 132
A D+V L ++ EA +A Y++ + +
Sbjct: 260 APDDV-KLLSFVETADEAWDIIARRYEIETAE 290
>gi|149186417|ref|ZP_01864730.1| hypothetical protein ED21_23048 [Erythrobacter sp. SD-21]
gi|148830006|gb|EDL48444.1| hypothetical protein ED21_23048 [Erythrobacter sp. SD-21]
Length = 294
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 16/115 (13%)
Query: 15 VDLRFFSARK-HGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPV 73
++ +F+ RK H L+ AV PGG GT DE FE+L LIQ G P+
Sbjct: 195 LNFHYFALRKMHFLLRA---------KAVAVFPGGFGTFDEFFELLTLIQ---TGKMKPM 242
Query: 74 PFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
P L+ D F+ ++++F E+ GT++K ++ L++ C++ EA +++ FY+L
Sbjct: 243 PILLFGKD-FWTRVVNFEAIAEE-GTISKKDL-DLFRWCETADEAWDHISAFYEL 294
>gi|418940397|ref|ZP_13493762.1| Conserved hypothetical protein CHP00730 [Rhizobium sp. PDO1-076]
gi|375052811|gb|EHS49213.1| Conserved hypothetical protein CHP00730 [Rhizobium sp. PDO1-076]
Length = 292
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 57/89 (64%), Gaps = 6/89 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE FE + LIQ +R+ P+P L++ SF+ +++F G E +GT+
Sbjct: 205 AIAIFPGGFGTLDEFFEAVTLIQTKRMA---PIP-LILFSKSFWHGMINFDGLAE-FGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLS 129
A +++ +L + ++ +A +A+FYDL+
Sbjct: 260 APEDL-NLLQFAETAEDAWRIVADFYDLN 287
>gi|402825064|ref|ZP_10874386.1| hypothetical protein LH128_18879 [Sphingomonas sp. LH128]
gi|402261415|gb|EJU11456.1| hypothetical protein LH128_18879 [Sphingomonas sp. LH128]
Length = 291
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GT DE FE+L LIQ G P+P L+ + F++++++F E+
Sbjct: 207 AVAVFPGGFGTFDEFFELLTLIQ---TGKMKPIPILLYGRE-FWERVVNFEALAEEGVIN 262
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
AKD SL++ C++ E ++ +FYDL
Sbjct: 263 AKD--LSLFRWCETAEEGWGHVQQFYDL 288
>gi|341616212|ref|ZP_08703081.1| hypothetical protein CJLT1_14717 [Citromicrobium sp. JLT1363]
Length = 296
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AVV PGG GT DE FE+L L+Q G P+P L+ D F+ +++DF E+
Sbjct: 213 AVVVFPGGFGTFDEFFELLTLVQ---TGKMKPLPILLFGKD-FWNRVIDFDALAEEGTIS 268
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
A+D W C++ EA + +A+FY+L
Sbjct: 269 ARDLDLITW--CETAEEAWAAIAKFYEL 294
>gi|146276103|ref|YP_001166262.1| hypothetical protein Rsph17025_0045 [Rhodobacter sphaeroides ATCC
17025]
gi|145554344|gb|ABP68957.1| conserved hypothetical protein 730 [Rhodobacter sphaeroides ATCC
17025]
Length = 268
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 14/110 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F+ RK + A AVV PGG GTLDEMFE L LIQ +R+ P+PF
Sbjct: 172 NFHYFAVRKMHFLMRA--------RAVVVFPGGFGTLDEMFESLTLIQTKRMK---PIPF 220
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
L+ D F++K++++ E GT++ +++ L++ ++ EAL L E+
Sbjct: 221 LLFGRD-FWEKIINWQALAE-IGTISPEDL-RLFRFVETADEALDALDEW 267
>gi|295094431|emb|CBK83522.1| conserved hypothetical protein, DprA/Smf-related, family 2
[Coprococcus sp. ART55/1]
Length = 188
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 17/122 (13%)
Query: 6 VLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLE 65
+L + S+L+ RK + D D A + PGG+GTL+E FEIL L QL
Sbjct: 72 ILFENVSELITTETMRERKQ------IMEDKAD--AFIVTPGGIGTLEEFFEILTLKQLG 123
Query: 66 RIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWG--TVAKDEVASLWKICDSNSEALSYLA 123
R G + ++ N + FY LL L + D G T A +E+ + + D++ E L YL
Sbjct: 124 RHGKAI----VIFNQNGFYDHLLSMLKETSDKGFMTPATNEI---YTVMDNSDEILDYLE 176
Query: 124 EF 125
+
Sbjct: 177 SY 178
>gi|429207273|ref|ZP_19198532.1| Decarboxylase family protein [Rhodobacter sp. AKP1]
gi|428189648|gb|EKX58201.1| Decarboxylase family protein [Rhodobacter sp. AKP1]
Length = 268
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 14/110 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F+ RK + A AVV PGG GTLDEMFE L LIQ +R+ P+PF
Sbjct: 172 NFHYFAVRKMHFLMRA--------RAVVVFPGGFGTLDEMFESLTLIQTKRMK---PIPF 220
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
L+ + F++K++++ E GT+A +++ L++ ++ EAL L E+
Sbjct: 221 LLFGRE-FWEKIINWQALAE-VGTIAPEDL-RLFRFVETADEALEALDEW 267
>gi|126463553|ref|YP_001044667.1| hypothetical protein Rsph17029_2793 [Rhodobacter sphaeroides ATCC
17029]
gi|332559606|ref|ZP_08413928.1| hypothetical protein RSWS8N_11125 [Rhodobacter sphaeroides WS8N]
gi|126105217|gb|ABN77895.1| conserved hypothetical protein 730 [Rhodobacter sphaeroides ATCC
17029]
gi|332277318|gb|EGJ22633.1| hypothetical protein RSWS8N_11125 [Rhodobacter sphaeroides WS8N]
Length = 268
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 14/110 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F+ RK + A AVV PGG GTLDEMFE L LIQ +R+ P+PF
Sbjct: 172 NFHYFAVRKMHFLMRA--------RAVVVFPGGFGTLDEMFESLTLIQTKRMK---PIPF 220
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
L+ + F++K++++ E GT+A +++ L++ ++ EAL L E+
Sbjct: 221 LLFGRE-FWEKIINWQALAE-VGTIAPEDL-RLFRFVETADEALEALDEW 267
>gi|440748676|ref|ZP_20927927.1| hypothetical protein C943_0491 [Mariniradius saccharolyticus AK6]
gi|436482800|gb|ELP38888.1| hypothetical protein C943_0491 [Mariniradius saccharolyticus AK6]
Length = 275
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 13/105 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ +F RK L+ SC A + +PGG+GTLDE+FE LIQ ++IG P P
Sbjct: 156 IEFNYFFIRKVMLVKY-----SC---AFIVMPGGLGTLDELFEAATLIQCKKIG---PFP 204
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEAL 119
+++ + F+K L DF+G G A +E+ KI D+ EA+
Sbjct: 205 LILVGKE-FWKGLRDFVGYMAGQGVFAPEEIG-FSKIVDTPEEAV 247
>gi|77464713|ref|YP_354217.1| hypothetical protein RSP_1132 [Rhodobacter sphaeroides 2.4.1]
gi|77389131|gb|ABA80316.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
Length = 274
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 14/110 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F+ RK + A AVV PGG GTLDEMFE L LIQ +R+ P+PF
Sbjct: 178 NFHYFAVRKMHFLMRA--------RAVVVFPGGFGTLDEMFESLTLIQTKRMK---PIPF 226
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
L+ + F++K++++ E GT+A +++ L++ ++ EAL L E+
Sbjct: 227 LLFGRE-FWEKIINWQALAE-VGTIAPEDL-RLFRFVETADEALDALDEW 273
>gi|221640627|ref|YP_002526889.1| hypothetical protein RSKD131_2528 [Rhodobacter sphaeroides KD131]
gi|221161408|gb|ACM02388.1| Hypothetical Protein RSKD131_2528 [Rhodobacter sphaeroides KD131]
Length = 274
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 14/110 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F+ RK + A AVV PGG GTLDEMFE L LIQ +R+ P+PF
Sbjct: 178 NFHYFAVRKMHFLMRA--------RAVVVFPGGFGTLDEMFESLTLIQTKRMK---PIPF 226
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
L+ + F++K++++ D GT++ +++ L++ ++ EAL L E+
Sbjct: 227 LLFGRE-FWEKIINWQA-LADVGTISPEDL-RLFRFVETADEALDALDEW 273
>gi|337287830|ref|YP_004627302.1| hypothetical protein TOPB45_0260 [Thermodesulfobacterium sp. OPB45]
gi|334901568|gb|AEH22374.1| Conserved hypothetical protein CHP00730 [Thermodesulfobacterium
geofontis OPF15]
Length = 227
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 18/114 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ ++F RK + +V A V PGG GTLDEMFE+L L+Q ++I P+P
Sbjct: 126 LEFKYFFVRKVMMAKYSV--------AFVFFPGGFGTLDEMFEVLTLVQTKKIK---PIP 174
Query: 75 FLVMN---YDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
++++ +D YK ++DFL + KD L+KI D+ E + Y+ E+
Sbjct: 175 IVLIDRNFWDPLYKWMVDFL--IPNNKISPKD--IDLFKIVDTPEETVDYIKEY 224
>gi|410462977|ref|ZP_11316523.1| TIGR00730 family protein [Desulfovibrio magneticus str. Maddingley
MBC34]
gi|409983916|gb|EKO40259.1| TIGR00730 family protein [Desulfovibrio magneticus str. Maddingley
MBC34]
Length = 218
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 14/108 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
D R+F RK I A+ A +A+PGG GTLDE+ E L LIQ RI P P
Sbjct: 118 DYRYFFIRKLMFIKYAM--------AYIAMPGGFGTLDELSEALVLIQTRRIK---PFPI 166
Query: 76 LVMNYDSFYKKLLD-FLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
+ M +F+ L+D F G ++ G V+ +++ L+ + D+ EA++Y+
Sbjct: 167 IFMG-KAFWGGLIDWFKGTLQERGFVSAEDM-ELFTVLDTPEEAVAYI 212
>gi|296283047|ref|ZP_06861045.1| hypothetical protein CbatJ_05475 [Citromicrobium bathyomarinum
JL354]
Length = 295
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GT DE FE+L LIQ G P+P L+ D F+ ++++F E+
Sbjct: 212 AVAVFPGGFGTFDEFFELLTLIQ---TGKMKPMPILLFGED-FWSRVINFEALAEEGTIS 267
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
A+D W C++ EA + +A+FYDL
Sbjct: 268 ARDLDLITW--CETADEAWAAIAKFYDL 293
>gi|407715461|ref|YP_006836741.1| Lysine decarboxylase family protein [Cycloclasticus sp. P1]
gi|407255797|gb|AFT66238.1| Lysine decarboxylase family protein [Cycloclasticus sp. P1]
Length = 225
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R F ARK + A TA V LPGG GTLDE+ EIL L+Q G +P
Sbjct: 108 LNFRHFFARKVMFVKYA--------TAYVVLPGGYGTLDELAEILTLVQ---TGKTRKIP 156
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+++N + F+ L+D+ + K E L+++C++ E L+ + +FY+
Sbjct: 157 IILVNKE-FWNGLIDWFSNTLVATGTLKKEDLDLFQLCETPDEVLTAIFDFYE 208
>gi|239906708|ref|YP_002953449.1| hypothetical protein DMR_20720 [Desulfovibrio magneticus RS-1]
gi|239796574|dbj|BAH75563.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 218
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 14/108 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
D R+F RK I A+ A +A+PGG GTLDE+ E L LIQ RI P P
Sbjct: 118 DYRYFFIRKLMFIKYAM--------AYIAMPGGFGTLDELSEALVLIQTRRIK---PFPI 166
Query: 76 LVMNYDSFYKKLLD-FLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
+ M +F+ L+D F G D G V+ +++ L+ + D+ EA++Y+
Sbjct: 167 IFMG-KAFWGGLIDWFKGTVLDRGFVSAEDL-ELFTVLDTPEEAVAYI 212
>gi|85860500|ref|YP_462702.1| lysine decarboxylase family protein [Syntrophus aciditrophicus SB]
gi|85723591|gb|ABC78534.1| lysine decarboxylase family [Syntrophus aciditrophicus SB]
Length = 219
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 20/115 (17%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D ++F RK + AV A V PGG GTLDE+FE L LIQ +RI S P
Sbjct: 118 IDYKYFFIRKVMFVKYAV--------AYVIFPGGYGTLDELFEALTLIQTKRIKS---FP 166
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVAS----LWKICDSNSEALSYLAEF 125
+++ D ++K L+D+L D + +D + S L +I D EA+ Y+ F
Sbjct: 167 VILLGSD-YWKGLMDWLNDT----MLKEDMILSDDLDLIRITDDPDEAVRYIQRF 216
>gi|431930444|ref|YP_007243490.1| hypothetical protein Thimo_1055 [Thioflavicoccus mobilis 8321]
gi|431828747|gb|AGA89860.1| TIGR00730 family protein [Thioflavicoccus mobilis 8321]
Length = 298
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE L LIQ R+ PVP L+ ++++++++DF D G +
Sbjct: 215 ALVAFPGGYGTLDELFETLTLIQTRRVD---PVPVLLFG-EAYWRRIIDF-DALVDEGAI 269
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
++ L+ ++ EA + +A FY
Sbjct: 270 GPGDI-ELFSYVETAEEAWNRIAAFY 294
>gi|146081777|ref|XP_001464342.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134068434|emb|CAM66724.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 332
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDEMFE+L L Q ++I S LPV V+ F++ ++++ D+G +
Sbjct: 242 AIVVAPGGFGTLDEMFELLTLKQTKKIPS-LPV---VLLGKEFWQTVVNWQA-LADYGVI 296
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+++E+ SL DS EA+ ++ +FY
Sbjct: 297 SQEEIDSLL-FTDSAEEAVEHIKDFY 321
>gi|283780059|ref|YP_003370814.1| hypothetical protein Psta_2284 [Pirellula staleyi DSM 6068]
gi|283438512|gb|ADB16954.1| conserved hypothetical protein [Pirellula staleyi DSM 6068]
Length = 270
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 13/107 (12%)
Query: 13 QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELP 72
Q V+ ++F RK L+ SC A + LPGG+GTLDE+FE LIQ ++G P
Sbjct: 157 QTVEFQYFFIRKVMLMKY-----SC---AYIVLPGGLGTLDELFEAATLIQCGKVG---P 205
Query: 73 VPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEAL 119
P +++ ++F+ + DFL + G A +E+ +I DS EA+
Sbjct: 206 FPLVLLG-ETFWSGMRDFLFYMVEQGVFAPEEIG-FGRIVDSPKEAV 250
>gi|326316763|ref|YP_004234435.1| hypothetical protein Acav_1954 [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323373599|gb|ADX45868.1| Conserved hypothetical protein CHP00730 [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 287
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE+L L+Q G PVP ++ + F+K +++F E GT+
Sbjct: 206 ALVAFPGGFGTLDELFEVLTLVQ---TGKAKPVPIVLFGTE-FWKSVVNFEALVEQ-GTI 260
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ ++ +L+ D EA ++ FY L
Sbjct: 261 SAADL-NLFHYTDDPEEAWGFIKAFYKL 287
>gi|365096451|ref|ZP_09331043.1| hypothetical protein KYG_20033 [Acidovorax sp. NO-1]
gi|363413831|gb|EHL21020.1| hypothetical protein KYG_20033 [Acidovorax sp. NO-1]
Length = 287
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE+L L+Q ++ PVP ++ D ++K+L++F E+ GT+
Sbjct: 206 ALVAFPGGFGTLDELFEVLTLVQTKKAK---PVPIVLFGTD-YWKRLINFEVLVEE-GTI 260
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ ++ L+ D EA + FY L
Sbjct: 261 SAQDL-KLFHYTDDPKEAWGLIKSFYQL 287
>gi|319762250|ref|YP_004126187.1| hypothetical protein Alide_1540 [Alicycliphilus denitrificans BC]
gi|330825823|ref|YP_004389126.1| hypothetical protein Alide2_3269 [Alicycliphilus denitrificans
K601]
gi|317116811|gb|ADU99299.1| Conserved hypothetical protein CHP00730 [Alicycliphilus
denitrificans BC]
gi|329311195|gb|AEB85610.1| Conserved hypothetical protein CHP00730 [Alicycliphilus
denitrificans K601]
Length = 287
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDE+FE+L L+Q G P P +V+ +F+K+L++F E GTV
Sbjct: 206 ALVLFPGGFGTLDELFEVLTLVQ---TGKAKPAP-IVLFGTAFWKRLINFEALVEQ-GTV 260
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ +++ L+ D +EA + FY+L
Sbjct: 261 SPEDL-KLFHYTDDPAEAWGIIRAFYEL 287
>gi|351732308|ref|ZP_08949999.1| hypothetical protein AradN_21137 [Acidovorax radicis N35]
Length = 287
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE+L L+Q ++ PVP ++ D ++K+L++F E+ GT+
Sbjct: 206 ALVAFPGGFGTLDELFEVLTLVQTKKAK---PVPIVLFGTD-YWKRLINFEVLVEE-GTI 260
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ ++ L+ D EA + FY L
Sbjct: 261 SAQDL-KLFHYTDDPQEAWELIKSFYQL 287
>gi|319792633|ref|YP_004154273.1| hypothetical protein Varpa_1953 [Variovorax paradoxus EPS]
gi|315595096|gb|ADU36162.1| Conserved hypothetical protein CHP00730 [Variovorax paradoxus EPS]
Length = 287
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE++ L+Q ++ PVP ++ D ++K+++DF D G +
Sbjct: 206 ALVAFPGGFGTLDELFEVITLVQTKK---SKPVPIVLFGSD-YWKRMIDF-DFLVDEGVI 260
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ +V L++ D+ +A Y+ FY L
Sbjct: 261 SPGDV-KLFEYVDAPEDAWDYIKRFYKL 287
>gi|452751573|ref|ZP_21951318.1| Decarboxylase family protein [alpha proteobacterium JLT2015]
gi|451960792|gb|EMD83203.1| Decarboxylase family protein [alpha proteobacterium JLT2015]
Length = 282
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 16/119 (13%)
Query: 16 DLRFFSARK-HGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ +F+ RK H LI AV A PGG GT+DE+FE L LIQ +I +PV
Sbjct: 178 NFHYFAIRKMHFLIRA---------RAVAAFPGGFGTMDELFETLTLIQTGKI-KRMPV- 226
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
++ ++F+++++DF D GT++ ++ L+ ++ E +A+FY + DK
Sbjct: 227 --LLFGETFWRRIVDFEA-LADEGTISHKDL-ELFNFVETAEEGWQIVADFYAIEEGDK 281
>gi|440225377|ref|YP_007332468.1| decarboxylase family protein [Rhizobium tropici CIAT 899]
gi|440036888|gb|AGB69922.1| decarboxylase family protein [Rhizobium tropici CIAT 899]
Length = 290
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE+FE L LIQ R+ LP L++ + F++ +++F E +GT+
Sbjct: 205 AIAVFPGGFGTLDELFECLTLIQTGRM-ERLP---LILFGEKFWRNIINFEALAE-FGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A D+V +L D+ EA +A+FY+
Sbjct: 260 APDDV-NLISFVDTADEAWKIVADFYE 285
>gi|398012672|ref|XP_003859529.1| hypothetical protein, conserved [Leishmania donovani]
gi|322497745|emb|CBZ32821.1| hypothetical protein, conserved [Leishmania donovani]
Length = 332
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDEMFE+L L Q ++I S LPV V+ F++ ++++ D+G +
Sbjct: 242 AIVVAPGGFGTLDEMFELLTLKQTKKIPS-LPV---VLLGKEFWQMVVNWQA-LADYGVI 296
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+++E+ SL DS EA+ ++ +FY
Sbjct: 297 SQEEIDSLL-FTDSAEEAVEHIKDFY 321
>gi|126733859|ref|ZP_01749606.1| decarboxylase family protein [Roseobacter sp. CCS2]
gi|126716725|gb|EBA13589.1| decarboxylase family protein [Roseobacter sp. CCS2]
Length = 281
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 40 TAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGT 99
+AV PGG GTLDEMFE L LIQ R+ VPFL+ SF++K++++ D GT
Sbjct: 189 SAVCVFPGGFGTLDEMFEALTLIQTGRMEQ---VPFLLFG-KSFWEKIINWDA-LADAGT 243
Query: 100 VAKDEVASLWKICDSNSEALSYL 122
++ D++ L++ D+ EA+S L
Sbjct: 244 ISADDL-KLFRFVDTAEEAISAL 265
>gi|317153501|ref|YP_004121549.1| hypothetical protein Daes_1791 [Desulfovibrio aespoeensis Aspo-2]
gi|316943752|gb|ADU62803.1| Conserved hypothetical protein CHP00730 [Desulfovibrio aespoeensis
Aspo-2]
Length = 219
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
D R+F RK I A+ A VALPGG GTLDE+ E L LIQ RI P P
Sbjct: 119 DFRYFFIRKLMFIKYAM--------AYVALPGGYGTLDELAEALVLIQTHRIK---PFPI 167
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
++M + F+ L+D+ D +E L+ + D EA++Y+ +
Sbjct: 168 VLMGTE-FWSGLIDWFRDQMVSNKFCNEEDLDLFIVTDDAKEAVTYIKK 215
>gi|261416422|ref|YP_003250105.1| hypothetical protein Fisuc_2036 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|385791282|ref|YP_005822405.1| putative decarboxylase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372878|gb|ACX75623.1| conserved hypothetical protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327991|gb|ADL27192.1| putative decarboxylase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 280
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 13/108 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ R+F RK+ + A A+V PGG GTLDE FE+L LIQ ++ ++PV
Sbjct: 160 LQFRYFFVRKYWFLRMA--------RALVIFPGGFGTLDEAFEMLTLIQTDKYAQQMPV- 210
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
V+ +F+KK L++ E G + +++ L+K CD+ EA ++
Sbjct: 211 --VIFDSNFWKKALNWEFFAET-GMINPEDL-KLFKFCDTVDEAYDFI 254
>gi|373459894|ref|ZP_09551661.1| Conserved hypothetical protein CHP00730 [Caldithrix abyssi DSM
13497]
gi|371721558|gb|EHO43329.1| Conserved hypothetical protein CHP00730 [Caldithrix abyssi DSM
13497]
Length = 286
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 13/107 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F RK+ L+ + A++ PGG GTLDE+ E+L L+Q +I P+P
Sbjct: 171 EFHYFFMRKYWLVYLS--------KALIIFPGGFGTLDELMEVLTLLQTGKI--HRPLPI 220
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
+V D ++++++DF WGT+A +++ + +K +S E YL
Sbjct: 221 VVFGQD-YWQEIIDFEAMAR-WGTIAFNDL-NFFKFVNSAEEGFHYL 264
>gi|121609299|ref|YP_997106.1| hypothetical protein Veis_2341 [Verminephrobacter eiseniae EF01-2]
gi|121553939|gb|ABM58088.1| conserved hypothetical protein 730 [Verminephrobacter eiseniae
EF01-2]
Length = 284
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE+L L+Q ++ PVP +V+ ++K+L+DF E+ GT+
Sbjct: 203 ALVAFPGGFGTLDELFEVLTLVQTQKAK---PVP-IVLFGSGYWKRLIDFDVLVEE-GTI 257
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ ++A L+ D +A + FY L
Sbjct: 258 SAQDLA-LFHYADEPGQAWDLIRGFYRL 284
>gi|294055881|ref|YP_003549539.1| hypothetical protein [Coraliomargarita akajimensis DSM 45221]
gi|293615214|gb|ADE55369.1| conserved hypothetical protein [Coraliomargarita akajimensis DSM
45221]
Length = 282
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F RK+ + A A++A PGG GTLDE+FE L LIQ + S VP
Sbjct: 179 EFHYFFTRKYWFVHIA--------KALIAFPGGFGTLDELFETLTLIQTGKTPS---VPP 227
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
+V+ F+K +++F E WGT++ +++ L D +A ++L E
Sbjct: 228 IVLFGSEFWKNVVNFDTLVE-WGTISPEDL-DLIHFSDDVDDAFNFLVE 274
>gi|404492231|ref|YP_006716337.1| hypothetical protein Pcar_0641 [Pelobacter carbinolicus DSM 2380]
gi|77544338|gb|ABA87900.1| protein of unknown function TIGR00730 [Pelobacter carbinolicus DSM
2380]
Length = 297
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE L LIQ ++I PVP L+ S+++++++F E+
Sbjct: 213 ALVAFPGGYGTLDELFETLTLIQTKKIK---PVPVLLFG-RSYWERVINFNALAEEGMIS 268
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
A+D L+ DS +A ++ +FY
Sbjct: 269 AED--LQLFSFVDSAEQACRHIFDFY 292
>gi|407893897|ref|ZP_11152927.1| hypothetical protein Dmas2_07665 [Diplorickettsia massiliensis 20B]
Length = 311
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 16/115 (13%)
Query: 16 DLRFFSARK-HGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+F+ RK H LI A+V PGG GTLDE+FE L L+Q ++I P+P
Sbjct: 190 QFHYFAIRKMHFLIRA---------RALVCFPGGYGTLDELFETLTLLQNKKIK---PIP 237
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
L+ F+ KL++F ++ G ++++++ L+ +S +A +A+FYDL
Sbjct: 238 LLLFG-KKFWSKLINFDFMVKE-GMISQEDL-KLFHYVESAEQAWKSIADFYDLQ 289
>gi|398808679|ref|ZP_10567539.1| TIGR00730 family protein [Variovorax sp. CF313]
gi|398087031|gb|EJL77629.1| TIGR00730 family protein [Variovorax sp. CF313]
Length = 287
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE++ L+Q ++ PVP ++ D ++K+L+DF D G +
Sbjct: 206 ALVAFPGGFGTLDELFEVITLVQTKK---SKPVPIVLFGSD-YWKRLIDF-DFLVDEGVI 260
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ +V L++ D+ +A S + FY L
Sbjct: 261 SPGDV-KLFEYVDAPEDAWSAIKRFYKL 287
>gi|399067023|ref|ZP_10748703.1| putative Rossmann fold nucleotide-binding protein [Novosphingobium
sp. AP12]
gi|398027438|gb|EJL20989.1| putative Rossmann fold nucleotide-binding protein [Novosphingobium
sp. AP12]
Length = 291
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GT DE FE+L LIQ G P+P L+ + F+++++DF E+ GT+
Sbjct: 207 AVAVFPGGFGTFDEFFELLTLIQ---TGKMKPIPILLYGRE-FWERVIDFEALAEE-GTI 261
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
++ L++ C++ E ++++FY L
Sbjct: 262 NPADL-DLFRWCETAEEGWEHISKFYGL 288
>gi|241763682|ref|ZP_04761731.1| conserved hypothetical protein [Acidovorax delafieldii 2AN]
gi|241367071|gb|EER61445.1| conserved hypothetical protein [Acidovorax delafieldii 2AN]
Length = 287
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE+L L+Q G PVP ++ D ++K+L++F E+
Sbjct: 206 ALVAFPGGFGTLDELFEVLTLVQ---TGKAKPVPIVLFGVD-YWKRLINFDVMVEEGTIS 261
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
AKD L+ D +A + FY L
Sbjct: 262 AKD--LELFHFTDDPQKAWDLVKAFYKL 287
>gi|84489607|ref|YP_447839.1| hypothetical protein Msp_0803 [Methanosphaera stadtmanae DSM 3091]
gi|84372926|gb|ABC57196.1| conserved hypothetical protein [Methanosphaera stadtmanae DSM 3091]
Length = 178
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A + PGG+GTLDE FEI+ L +LE I S+ P ++ N ++FY ++ + D + TV
Sbjct: 99 AFIVTPGGIGTLDEFFEIITLKKLE-IHSK---PIVIFNINNFYDSMIKMIEDMINENTV 154
Query: 101 AKDEVASLWKICDSNSEALSYLAEF 125
++D L+ I + E + YL +
Sbjct: 155 SRDS-TQLYHITTTVDETMDYLENY 178
>gi|449133300|ref|ZP_21768946.1| decarboxylase family protein [Rhodopirellula europaea 6C]
gi|448887921|gb|EMB18266.1| decarboxylase family protein [Rhodopirellula europaea 6C]
Length = 357
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 18/138 (13%)
Query: 9 KQESQLVDLRFFSARK-HGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERI 67
+ + +LV L++F RK L +C + +V LPGG GTLDE E+L L+Q +
Sbjct: 154 ENDPKLVTLKYFFTRKLMFLKEC---------SGIVCLPGGFGTLDEGLEVLTLLQTGK- 203
Query: 68 GSELPVPFLVMNYDSFYKKLLDFLGD---CEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
+ +P+ FL S++K L F+ C G ++ ++VA L+KI +S EA+ L
Sbjct: 204 QTMMPLIFLDHPGGSYWKDLGKFIDKQLMCN--GMISPEDVA-LYKITNSVDEAVEELLT 260
Query: 125 FYDLSSIDKRV-HEVNLK 141
FYD+ + V H++ L+
Sbjct: 261 FYDVYHSQRYVGHQLVLR 278
>gi|407939438|ref|YP_006855079.1| hypothetical protein C380_13700 [Acidovorax sp. KKS102]
gi|407897232|gb|AFU46441.1| hypothetical protein C380_13700 [Acidovorax sp. KKS102]
Length = 287
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE+L L+Q ++ PVP ++ D ++K+L++F E+ GT+
Sbjct: 206 ALVAFPGGFGTLDELFEVLTLVQTKKAK---PVPIVLFGTD-YWKRLINFDVLVEE-GTI 260
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ ++ +L+ D EA + FY L
Sbjct: 261 SAQDL-NLFHYTDEPQEAWDLIRAFYKL 287
>gi|401418073|ref|XP_003873528.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489759|emb|CBZ25019.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 332
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDE+FE+L L Q ++I S LPV V+ F++ ++++ D+G +
Sbjct: 242 AIVVAPGGFGTLDELFELLTLKQTKKIPS-LPV---VLLDKEFWRTVVNWQA-LADYGVI 296
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+++E+ SL DS EA+ ++ +FY
Sbjct: 297 SQEEIDSLL-FTDSAEEAVEHIKDFY 321
>gi|395008647|ref|ZP_10392273.1| TIGR00730 family protein [Acidovorax sp. CF316]
gi|394313369|gb|EJE50417.1| TIGR00730 family protein [Acidovorax sp. CF316]
Length = 287
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE+L L+Q G PVP ++ D ++K+L++F E+ GT+
Sbjct: 206 ALVAFPGGFGTLDELFEVLTLVQ---TGKAKPVPIVLFGTD-YWKRLVNFDVLVEE-GTI 260
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ ++ L+ D EA + FY +
Sbjct: 261 SPQDL-KLFHYTDDPQEAWDLIKAFYKI 287
>gi|39997002|ref|NP_952953.1| Rossmann fold nucleotide-binding protein [Geobacter sulfurreducens
PCA]
gi|409912431|ref|YP_006890896.1| Rossmann fold nucleotide-binding protein [Geobacter sulfurreducens
KN400]
gi|39983890|gb|AAR35280.1| Rossmann fold nucleotide-binding protein [Geobacter sulfurreducens
PCA]
gi|298506019|gb|ADI84742.1| Rossmann fold nucleotide-binding protein [Geobacter sulfurreducens
KN400]
Length = 342
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 12/124 (9%)
Query: 4 PKVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQ 63
P + Q +L++ ++F RK + + A+ PGG GTLDE E+ LIQ
Sbjct: 144 PNPVMLQNPRLINYKYFFNRKVAFVK--------ESNAIAVFPGGFGTLDEAMEVFTLIQ 195
Query: 64 LERIGSELPVPF-LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
G P P L+ + D ++ + DF+ C E S++ I EA+ +
Sbjct: 196 ---TGKTSPKPLVLIDDSDGYWDRWFDFVTSCILGKGFISAEDFSIFTITRDEDEAIRVI 252
Query: 123 AEFY 126
EFY
Sbjct: 253 EEFY 256
>gi|334139809|ref|YP_004533007.1| hypothetical protein [Novosphingobium sp. PP1Y]
gi|333937831|emb|CCA91189.1| conserved hypothetical protein [Novosphingobium sp. PP1Y]
Length = 290
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GTLDE E+L L+Q G P+P L+ + F++++++F E+ GT+
Sbjct: 206 AVAVFPGGFGTLDEFLELLTLVQ---TGKMKPIPILLYGRE-FWERIINFEALAEE-GTI 260
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
++ L+ C++ E + + EFYDL
Sbjct: 261 NASDL-DLFHWCETGEEGWTRIREFYDL 287
>gi|317970451|ref|ZP_07971841.1| Rossmann fold nucleotide-binding protein [Synechococcus sp. CB0205]
Length = 346
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+ +L+ R+F RK + + A+V +PGG GT DE+FE L LIQ R
Sbjct: 144 DGRLLHFRYFFTRKLFFLR--------ESDALVVMPGGFGTFDELFESLTLIQTGRT-PP 194
Query: 71 LPVPFLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+P+ L DSF+ L + G +D ++ ++ SL+K S +EAL ++ FY
Sbjct: 195 IPLVLLAPENDSFWSDWLKTIDGTLQDRALISSEDT-SLFKQARSAAEALEQISRFY 250
>gi|56461506|ref|YP_156787.1| Rossmann fold nucleotide-binding protein [Idiomarina loihiensis
L2TR]
gi|56180516|gb|AAV83238.1| Predicted Rossmann fold nucleotide-binding protein [Idiomarina
loihiensis L2TR]
Length = 298
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 14/114 (12%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
+F+ RK + A A+VA PGG GTLDE+FE L L+Q ++ SE PVP +
Sbjct: 193 FHYFAIRKMHFLQRA--------RALVAFPGGFGTLDELFETLTLVQTKK--SE-PVPIV 241
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSS 130
++ + F+++ +DF E+ GT+A+ ++ L++I DS +A + YDL +
Sbjct: 242 LVGSE-FWRRAIDFDLLVEE-GTIAEYDL-DLFQIVDSAEDAWQAICHCYDLKN 292
>gi|157866726|ref|XP_001681918.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68125369|emb|CAJ03228.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 332
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDEMFE+L L Q ++I S LPV V+ F++ ++++ ++G +
Sbjct: 242 AIVIAPGGFGTLDEMFELLTLKQTKKIPS-LPV---VLLGKEFWQTVVNWQA-LANYGVI 296
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+++E+ SL DS EA+ ++ +FY
Sbjct: 297 SQEEIDSLL-FTDSAEEAVEHIKDFY 321
>gi|300774848|ref|ZP_07084711.1| methionyl-tRNA formyltransferase [Chryseobacterium gleum ATCC
35910]
gi|300506663|gb|EFK37798.1| methionyl-tRNA formyltransferase [Chryseobacterium gleum ATCC
35910]
Length = 250
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
V +PGG GTLDE+ E + LIQ +IG + P+ V+ F+ LLD F G
Sbjct: 160 GFVVMPGGFGTLDELTEAMTLIQTNKIG-KFPI---VLVGSEFWGGLLDWFKATLLKEGM 215
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYDLSSID 132
+A+D++ L+++ DS EA++++ FYD S++
Sbjct: 216 IAEDDL-DLYRVVDSADEAVAHIKAFYDKYSVN 247
>gi|392390439|ref|YP_006427042.1| hypothetical protein Ornrh_1057 [Ornithobacterium rhinotracheale
DSM 15997]
gi|390521517|gb|AFL97248.1| TIGR00730 family protein [Ornithobacterium rhinotracheale DSM
15997]
Length = 235
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCE-DWGT 99
+ LPGG GTLDE+FE + LIQ ++IGS P+ V+ ++ L+D+ + + G
Sbjct: 145 GFIVLPGGFGTLDELFEAMTLIQTDKIGS-FPI---VLVGKKYWGGLIDWFKNVLIEEGK 200
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
+++D++ L+++ D+ EA+ ++ +FYD ++ +
Sbjct: 201 ISEDDL-KLFRLVDTAEEAVEHIKKFYDKYAVKQ 233
>gi|32476292|ref|NP_869286.1| hypothetical protein RB10175 [Rhodopirellula baltica SH 1]
gi|32446837|emb|CAD78743.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
Length = 375
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 17/124 (13%)
Query: 9 KQESQLVDLRFFSARK-HGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERI 67
+ + +LV L++F RK L +C+ +V LPGG GTLDE E+L L+Q +
Sbjct: 172 ENDPKLVTLKYFFTRKLMFLKECS---------GIVCLPGGFGTLDEGLEVLTLLQTGK- 221
Query: 68 GSELPVPFLVMNYDSFYKKLLDFLGD---CEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
+ +P+ FL S++K L F+ C G ++ ++VA L+KI +S EA+ L
Sbjct: 222 QTMMPLIFLDHPGGSYWKDLGKFIDKQLMCN--GMISPEDVA-LYKITNSVDEAVEELLT 278
Query: 125 FYDL 128
FYD+
Sbjct: 279 FYDV 282
>gi|393773993|ref|ZP_10362375.1| hypothetical protein WSK_3372 [Novosphingobium sp. Rr 2-17]
gi|392720579|gb|EIZ78062.1| hypothetical protein WSK_3372 [Novosphingobium sp. Rr 2-17]
Length = 295
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GT DE FE+L LIQ G P+P L+ + F++++++F E+ G +
Sbjct: 211 AVAVFPGGFGTFDEFFELLTLIQ---TGKMKPIPILLYGRE-FWERIINFEALAEE-GVI 265
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ ++ L+ C++ + S++ +FYDL
Sbjct: 266 NRKDL-DLFHWCETAQDGWSHVRKFYDL 292
>gi|374854989|dbj|BAL57858.1| hypothetical conserved protein [uncultured Bacteroidetes bacterium]
Length = 239
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 15/118 (12%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
E+ L++ +F RK + A A V LPGG GT+DE+FE L LIQ +I
Sbjct: 125 ENLLINFDYFFVRKVMFVKYA--------QAFVVLPGGFGTMDELFEALTLIQTRKI-ER 175
Query: 71 LPVPFLVMNYDSFYKKLLDFLGDC--EDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
PV VM F++ L++++ E+W ++ +++ L+ + D+ E + + FY
Sbjct: 176 FPV---VMVGRQFWQGLVEWIKQVVLEEWNYISPEDLF-LFSVVDTPQEVVEVINNFY 229
>gi|417306399|ref|ZP_12093308.1| decarboxylase family protein [Rhodopirellula baltica WH47]
gi|421613900|ref|ZP_16054969.1| decarboxylase family protein [Rhodopirellula baltica SH28]
gi|440714591|ref|ZP_20895170.1| decarboxylase family protein [Rhodopirellula baltica SWK14]
gi|327537296|gb|EGF24031.1| decarboxylase family protein [Rhodopirellula baltica WH47]
gi|408495107|gb|EKJ99696.1| decarboxylase family protein [Rhodopirellula baltica SH28]
gi|436440787|gb|ELP34091.1| decarboxylase family protein [Rhodopirellula baltica SWK14]
Length = 357
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 17/124 (13%)
Query: 9 KQESQLVDLRFFSARK-HGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERI 67
+ + +LV L++F RK L +C+ +V LPGG GTLDE E+L L+Q +
Sbjct: 154 ENDPKLVTLKYFFTRKLMFLKECS---------GIVCLPGGFGTLDEGLEVLTLLQTGK- 203
Query: 68 GSELPVPFLVMNYDSFYKKLLDFLGD---CEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
+ +P+ FL S++K L F+ C G ++ ++VA L+KI +S EA+ L
Sbjct: 204 QTMMPLIFLDHPGGSYWKDLGKFIDKQLMCN--GMISPEDVA-LYKITNSVDEAVEELLT 260
Query: 125 FYDL 128
FYD+
Sbjct: 261 FYDV 264
>gi|339482761|ref|YP_004694547.1| hypothetical protein Nit79A3_1313 [Nitrosomonas sp. Is79A3]
gi|338804906|gb|AEJ01148.1| Conserved hypothetical protein CHP00730 [Nitrosomonas sp. Is79A3]
Length = 239
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R F ARK+ + A TA V LPGG GTLDE+ E L L+Q + ++P+
Sbjct: 124 FRHFFARKYMFVKFA--------TAYVVLPGGFGTLDELMEALTLVQTGKT-RKMPI--- 171
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVH 136
++ Y F++ LLD+ E +L +I D S+ ++ + ++Y+ S +
Sbjct: 172 ILVYSEFWRGLLDWFQKTLIAEGFISAEDMNLIQIIDEPSQVVNAIFQYYETSGFEPTAA 231
Query: 137 EVNLK 141
E ++
Sbjct: 232 EREIQ 236
>gi|332662622|ref|YP_004445410.1| hypothetical protein [Haliscomenobacter hydrossis DSM 1100]
gi|332331436|gb|AEE48537.1| Conserved hypothetical protein CHP00730 [Haliscomenobacter
hydrossis DSM 1100]
Length = 240
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 62/108 (57%), Gaps = 13/108 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V +R+F RK LI + A V +PGG GTLDE FE + LIQ ++I + P
Sbjct: 119 VTIRYFFVRKTLLIKYSY--------AFVIMPGGFGTLDEFFETITLIQTQKIYN---FP 167
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
++ + +++K+++D + +D+G ++ +++ L+ + D EA +Y+
Sbjct: 168 IVIFD-KTYHKEIIDHIQVMKDYGAISPEDL-QLFLVTDDIHEAAAYI 213
>gi|383934985|ref|ZP_09988424.1| predicted Rossmann fold nucleotide-binding protein [Rheinheimera
nanhaiensis E407-8]
gi|383704116|dbj|GAB58515.1| predicted Rossmann fold nucleotide-binding protein [Rheinheimera
nanhaiensis E407-8]
Length = 293
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 14/115 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+F+ RK + A A+VA PGG GTLDE+FE L LIQ ++ +PV
Sbjct: 193 QFHYFAIRKMHFLQRA--------RALVAFPGGFGTLDELFETLTLIQTKK-SERVPV-- 241
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSS 130
++ +F+++L++F E+ G + D+VA L + D+ +A + +FY L +
Sbjct: 242 -ILYDKAFWQRLINFDMLVEE-GLIGTDDVA-LIQYADTPEQAWQLILDFYQLPA 293
>gi|224373651|ref|YP_002608023.1| hypothetical protein NAMH_1643 [Nautilia profundicola AmH]
gi|223589534|gb|ACM93270.1| conserved hypothetical protein [Nautilia profundicola AmH]
Length = 222
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 13/117 (11%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
++F RK + +V A V +PGG GTLDE+ E+L L+Q +R+ S++P+ F
Sbjct: 116 FKYFFTRKVTFLKYSV--------ATVMMPGGFGTLDELSEVLTLVQTKRM-SQIPIVFF 166
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
FYK LLDF + ++ ++ L+ + D E + Y+++ ++ I K
Sbjct: 167 G---SEFYKPLLDFYEKMLEMKYISPED-KKLYLVTDDVQEVVDYISQNAPITEILK 219
>gi|237709158|ref|ZP_04539639.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|345514250|ref|ZP_08793763.1| hypothetical protein BSEG_03448 [Bacteroides dorei 5_1_36/D4]
gi|423230572|ref|ZP_17216976.1| TIGR00730 family protein [Bacteroides dorei CL02T00C15]
gi|423240793|ref|ZP_17221907.1| TIGR00730 family protein [Bacteroides dorei CL03T12C01]
gi|423244281|ref|ZP_17225356.1| TIGR00730 family protein [Bacteroides dorei CL02T12C06]
gi|229437230|gb|EEO47307.1| hypothetical protein BSEG_03448 [Bacteroides dorei 5_1_36/D4]
gi|229456854|gb|EEO62575.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|392630716|gb|EIY24702.1| TIGR00730 family protein [Bacteroides dorei CL02T00C15]
gi|392642462|gb|EIY36228.1| TIGR00730 family protein [Bacteroides dorei CL02T12C06]
gi|392643755|gb|EIY37504.1| TIGR00730 family protein [Bacteroides dorei CL03T12C01]
Length = 195
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 13/111 (11%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
++L++ RK + D + V+ALPGG GTL+E+ EI+ QL G L
Sbjct: 82 TRLIETETMHERKRMMADLS--------DGVIALPGGCGTLEELLEIITWKQL---GLYL 130
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
P +++N + FY LL+ L D + K+ VA +WK+ + EA++ L
Sbjct: 131 N-PIIILNINGFYDSLLEMLQRAVDENFMRKEHVA-IWKVASTAEEAINLL 179
>gi|343473640|emb|CCD14524.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 324
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 55/87 (63%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AVV PGG GT+DE+FE+L L Q ++I + P+ + F+K ++++ D+GT+
Sbjct: 240 AVVIAPGGFGTMDEVFELLTLRQTQKI-HKFPIVLFCVK---FWKTVVNWEALV-DYGTI 294
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
+K+EV SL DS EAL+++ F++
Sbjct: 295 SKEEVDSLC-FTDSVDEALAFIRNFFE 320
>gi|372209711|ref|ZP_09497513.1| hypothetical protein FbacS_06331 [Flavobacteriaceae bacterium S85]
Length = 242
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 57/89 (64%), Gaps = 7/89 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGD--CEDWG 98
V +PGG GTLDE+FE + LIQ ++IG P+ V+ ++ LLD++ + +++
Sbjct: 151 GFVVMPGGFGTLDELFEAITLIQTKKIG-RFPI---VLVGKRYWSGLLDWIKERLLDEYK 206
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFYD 127
T++ +++ +L+++ DS EA+ +L FY+
Sbjct: 207 TISPEDL-NLFRLVDSADEAVEHLNNFYN 234
>gi|298709388|emb|CBJ31321.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 215
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDE+FE+L L Q ++ LPV +Y ++K++++ E +GT+
Sbjct: 124 ALVVAPGGFGTLDELFEVLTLKQTGKVQKTLPVILFGKDY---WEKIINWQALVE-FGTI 179
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSID 132
A+++V SL+ D EAL YL S I+
Sbjct: 180 AQEDVDSLF-FTDDPQEALDYLVGCLSKSGIN 210
>gi|116075084|ref|ZP_01472344.1| putative dape gene and orf2 [Synechococcus sp. RS9916]
gi|116067281|gb|EAU73035.1| putative dape gene and orf2 [Synechococcus sp. RS9916]
Length = 310
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 40 TAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDF--LGDCEDW 97
A V PGG GTLDE+FE+L L Q I S +PV ++ F+ +L+DF L DC
Sbjct: 218 AAAVLFPGGFGTLDELFEVLTLRQTA-IKSPMPV---ILYGKEFWSRLIDFDYLADC--- 270
Query: 98 GTVAKDEVASLWKICDSNSEALSYLAEF 125
+ +DE L++ D+ EA S++ F
Sbjct: 271 -GLIRDEHLDLFQFADTPEEAWSWIQAF 297
>gi|429123560|ref|ZP_19184093.1| Rossmann fold nucleotide-binding protein [Brachyspira hampsonii
30446]
gi|426280522|gb|EKV57535.1| Rossmann fold nucleotide-binding protein [Brachyspira hampsonii
30446]
Length = 223
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ R+F ARK + A AV+ PGG GT+DEMFE L LIQ + +P
Sbjct: 119 LKFRYFFARKVMFLKYA--------KAVIIFPGGFGTMDEMFETLTLIQTRVLAR---MP 167
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+VMNY S+Y L++++ E +L K ++ E L + FY
Sbjct: 168 LIVMNY-SYYTDLIEWIKKYMIGENYIDLEDLNLIKYAETPQETLDIINSFYQ 219
>gi|150003754|ref|YP_001298498.1| lysine decarboxylase [Bacteroides vulgatus ATCC 8482]
gi|294777427|ref|ZP_06742878.1| conserved hypothetical protein TIGR00730 [Bacteroides vulgatus
PC510]
gi|319640024|ref|ZP_07994751.1| lysine decarboxylase [Bacteroides sp. 3_1_40A]
gi|345517035|ref|ZP_08796514.1| hypothetical protein BSFG_00266 [Bacteroides sp. 4_3_47FAA]
gi|149932178|gb|ABR38876.1| putative lysine decarboxylase [Bacteroides vulgatus ATCC 8482]
gi|254833810|gb|EET14119.1| hypothetical protein BSFG_00266 [Bacteroides sp. 4_3_47FAA]
gi|294448495|gb|EFG17044.1| conserved hypothetical protein TIGR00730 [Bacteroides vulgatus
PC510]
gi|317388302|gb|EFV69154.1| lysine decarboxylase [Bacteroides sp. 3_1_40A]
Length = 195
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
++L++ RK + D + V+ALPGG GTL+E+ EI+ QL G L
Sbjct: 82 TRLIETETMHERKRMMADLS--------DGVIALPGGCGTLEELLEIITWKQL---GLYL 130
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
P +++N + FY LL+ L + G + E ++WK+ + EA++ L
Sbjct: 131 N-PIIILNINGFYNPLLEMLQRAVE-GNFMRKEHVAIWKVASTAEEAINLL 179
>gi|407788143|ref|ZP_11135278.1| hypothetical protein B30_18882 [Celeribacter baekdonensis B30]
gi|407198161|gb|EKE68202.1| hypothetical protein B30_18882 [Celeribacter baekdonensis B30]
Length = 296
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 16/111 (14%)
Query: 17 LRFFSARK-HGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
R+F+ RK H L+ A+VA PGG GTLDE+FE+L L+Q ++ S LP+
Sbjct: 181 FRYFAIRKMHFLLRA---------KALVAFPGGYGTLDELFEVLTLVQTRKMQS-LPI-- 228
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
++ F+ + +DF D G ++ + A L++ ++ +A+S L +FY
Sbjct: 229 -ILFGREFWNRAIDF-DFLVDEGMISSQDRA-LFRFVETAEQAVSVLKDFY 276
>gi|384918755|ref|ZP_10018822.1| decarboxylase family protein [Citreicella sp. 357]
gi|384467338|gb|EIE51816.1| decarboxylase family protein [Citreicella sp. 357]
Length = 280
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDEMFE L LIQ R+ VPFL+ +F++K++++ G E+ GT+
Sbjct: 190 AICVFPGGFGTLDEMFEALTLIQTGRMNR---VPFLLFGR-AFWEKIINW-GALEEAGTI 244
Query: 101 AKDEVASLWKICDSNSEALSYLAEF 125
+ +++ L++ ++ EA + + E+
Sbjct: 245 SPEDL-DLFRFVETADEATAVIEEW 268
>gi|255262369|ref|ZP_05341711.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
gi|255104704|gb|EET47378.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
Length = 282
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 16/109 (14%)
Query: 16 DLRFFSARK-HGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ +F+ RK H L+ A A+ PGG GTLDEMFE L LIQ R+ VP
Sbjct: 174 NFHYFAIRKMHFLMRAA---------AITVFPGGFGTLDEMFETLTLIQTGRMEK---VP 221
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLA 123
FL+ D F+ K++++ D GT++ +++ L+ + D+ +EA+ +A
Sbjct: 222 FLLFGKD-FWTKIINWEA-LSDAGTISAEDL-DLFVMVDTAAEAMDAIA 267
>gi|421065356|ref|ZP_15527125.1| Conserved hypothetical protein CHP00730, partial [Pelosinus
fermentans A12]
gi|392459120|gb|EIW35562.1| Conserved hypothetical protein CHP00730, partial [Pelosinus
fermentans A12]
Length = 148
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGD--CEDWG 98
A +ALPGG GTL+E+ EI+ L QL P +++N + FY KLL+ G C+ +
Sbjct: 54 AFIALPGGYGTLEEILEIITLKQLRYHNK----PIVILNINHFYDKLLEHFGKVICQQF- 108
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
AK E + L+ + S AL Y+ + Y+ +KR
Sbjct: 109 --AKIECSELYFVTGDISSALDYI-DSYEPPVFEKR 141
>gi|417858753|ref|ZP_12503810.1| hypothetical protein Agau_C101591 [Agrobacterium tumefaciens F2]
gi|338824757|gb|EGP58724.1| hypothetical protein Agau_C101591 [Agrobacterium tumefaciens F2]
Length = 288
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 55/87 (63%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AVV PGG GTLDE+FE L LIQ +R+ P+P L++ + F++ +++F D+GT+
Sbjct: 207 AVVIFPGGFGTLDELFEALTLIQTKRME---PIP-LILFGEKFWRSVINF-EFLADFGTI 261
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A +++ SL ++ +A ++E Y+
Sbjct: 262 APEDM-SLLHFAETADDAWRVISEHYE 287
>gi|84684529|ref|ZP_01012430.1| decarboxylase family protein [Maritimibacter alkaliphilus HTCC2654]
gi|84667508|gb|EAQ13977.1| decarboxylase family protein [Maritimibacter alkaliphilus HTCC2654]
Length = 282
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE+FE L LIQ R+ +P L+ + F+++++D+ ED GT+
Sbjct: 191 AIAVFPGGFGTLDELFESLTLIQTGRMKQ---IPILLFGRE-FWERIIDWKA-LEDAGTI 245
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 135
+ D++ L++ D+ EA+ + E +D +RV
Sbjct: 246 SPDDL-KLFRFVDTAEEAIEAM-ENWDEKGQKRRV 278
>gi|71409685|ref|XP_807174.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70871118|gb|EAN85323.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 330
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDEMFE+L L Q ++I +LP+ V+ SF++ ++++ E +GTV
Sbjct: 244 AIFIAPGGFGTLDEMFELLTLRQTKKI-PDLPI---VLLGSSFWRTVINWEALVE-FGTV 298
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+K+E+ SL D+ EAL ++ F+
Sbjct: 299 SKEEIDSLC-FADTVQEALEFIMGFF 323
>gi|443245504|ref|YP_007378729.1| putative lysine decarboxylase [Nonlabens dokdonensis DSW-6]
gi|442802903|gb|AGC78708.1| putative lysine decarboxylase [Nonlabens dokdonensis DSW-6]
Length = 229
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 15/114 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D +F ARK + + V +PGG GTLDE+FE + LIQ +IG P
Sbjct: 120 LDFDYFFARKVMFVKYS--------QGFVVMPGGFGTLDELFEAITLIQTNKIGK---FP 168
Query: 75 FLVMNYDSFYKKLLDFLGDCED--WGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+++ D F+ LLD++ + D + T++ +++ L + D++ EA++ + EFY
Sbjct: 169 IILVGTD-FWSGLLDWVKNTLDKKFFTISPEDI-DLLHVVDTSDEAVNIINEFY 220
>gi|421062009|ref|ZP_15524231.1| Conserved hypothetical protein CHP00730, partial [Pelosinus
fermentans B3]
gi|392444943|gb|EIW22311.1| Conserved hypothetical protein CHP00730, partial [Pelosinus
fermentans B3]
Length = 147
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGD--CEDWG 98
A +ALPGG GTL+E+ EI+ L QL P +++N + FY KLL+ G C+ +
Sbjct: 53 AFIALPGGYGTLEEILEIITLKQLRYHNK----PIVILNINHFYDKLLEHFGKVICQQF- 107
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
AK E + L+ + S AL Y+ + Y+ +KR
Sbjct: 108 --AKIECSELYFVTGDISSALDYI-DSYEPPVFEKR 140
>gi|343421957|emb|CCD18629.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 328
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 56/89 (62%), Gaps = 10/89 (11%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AVV PGG GT+DE+FE+L L Q ++I S PV V+ F+K ++++ E +GT+
Sbjct: 244 AVVVAPGGFGTMDELFELLTLRQTKKIPS-FPV---VLFCTKFWKTVVNWEALVE-FGTI 298
Query: 101 AKDEVASLWKIC--DSNSEALSYLAEFYD 127
+K EV S IC DS EAL+++ F++
Sbjct: 299 SKQEVQS---ICFTDSVDEALAFIRVFFE 324
>gi|359399208|ref|ZP_09192213.1| hypothetical protein NSU_1899 [Novosphingobium pentaromativorans
US6-1]
gi|357599414|gb|EHJ61127.1| hypothetical protein NSU_1899 [Novosphingobium pentaromativorans
US6-1]
Length = 290
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GTLDE E+L LIQ G P+P L+ + F++++++F E+ GT+
Sbjct: 206 AVAVFPGGFGTLDEFLELLTLIQ---TGKMKPIPILLYGRE-FWERIINFEALAEE-GTI 260
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
++ L+ C++ + + + EFYDL
Sbjct: 261 NASDL-DLFHWCETGEDGWARIREFYDL 287
>gi|423301004|ref|ZP_17279028.1| TIGR00730 family protein [Bacteroides finegoldii CL09T03C10]
gi|408472339|gb|EKJ90867.1| TIGR00730 family protein [Bacteroides finegoldii CL09T03C10]
Length = 195
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 21/134 (15%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
P+ + +Q ++L+++ RK + + + ++ALPGG GTL+E+ E
Sbjct: 68 PRFMVEQNWQHTGLTELIEVESMHERKQKMANLS--------DGIIALPGGCGTLEELLE 119
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
I+ QL G L P +++N + F+ LL+ LG D + + +WK+ + E
Sbjct: 120 IITWKQL---GLYLN-PIIILNVNGFFDPLLEMLGKAID-ENFMRQQHGDIWKVAQTPEE 174
Query: 118 ALSYLAE--FYDLS 129
AL L E +D+S
Sbjct: 175 ALRLLYETPIWDIS 188
>gi|424909306|ref|ZP_18332683.1| TIGR00730 family protein [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392845337|gb|EJA97859.1| TIGR00730 family protein [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 286
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AVV PGG GTLDE+FE L LIQ +R+ P+P L++ + F++ +++F D+GT+
Sbjct: 205 AVVVFPGGFGTLDELFEALTLIQTKRMA---PIP-LILFGEKFWRSVVNF-EFLADFGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A +++ +L ++ +A ++++Y+
Sbjct: 260 APEDM-NLLHFAETADDAWKIISDYYE 285
>gi|408787239|ref|ZP_11198970.1| hypothetical protein C241_14282 [Rhizobium lupini HPC(L)]
gi|408486870|gb|EKJ95193.1| hypothetical protein C241_14282 [Rhizobium lupini HPC(L)]
Length = 298
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 55/87 (63%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AVV PGG GTLDE+FE L LIQ +R+ P+P ++ + F++ +++F D+GT+
Sbjct: 217 AVVVFPGGFGTLDELFEALTLIQTKRMA---PIPLILFG-EKFWRSVVNF-EFLADFGTI 271
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A +++ +L ++ +A ++++Y+
Sbjct: 272 APEDM-NLLHFAETADDAWKIISDYYE 297
>gi|383759618|ref|YP_005438604.1| hypothetical protein RGE_37660 [Rubrivivax gelatinosus IL144]
gi|381380288|dbj|BAL97105.1| hypothetical protein RGE_37660 [Rubrivivax gelatinosus IL144]
Length = 298
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDE+FE + LIQ G P P L+ +F++KL+DF G +
Sbjct: 206 ALVCFPGGFGTLDELFETMTLIQ---TGKSRPRPILLFG-RAFWEKLIDF-EHLVATGMI 260
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSI 131
++ +L++ ++ EA +LA FY +I
Sbjct: 261 GAGDL-NLFRFVETAEEAWDHLASFYGFDAI 290
>gi|378824666|ref|YP_005187398.1| hypothetical protein SFHH103_00069 [Sinorhizobium fredii HH103]
gi|365177718|emb|CCE94573.1| conserved hypothetical protein [Sinorhizobium fredii HH103]
Length = 299
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GTLDE+FE + L+Q R+ VP LV+ + F++ +++F E +GT+
Sbjct: 205 AVAVFPGGFGTLDELFETMTLMQTGRLAL---VP-LVLFGEKFWRSIINFEALAE-FGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 135
A +++ L D+ EA +A FY+ ++D R
Sbjct: 260 APNDI-DLVHFVDTAEEAWEIIARFYE--TVDPRA 291
>gi|398349966|ref|YP_006395430.1| hypothetical protein USDA257_c00690 [Sinorhizobium fredii USDA 257]
gi|390125292|gb|AFL48673.1| hypothetical protein USDA257_c00690 [Sinorhizobium fredii USDA 257]
Length = 299
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GTLDE+FE + L+Q R+ VP LV+ + F++ +++F E +GT+
Sbjct: 205 AVAVFPGGFGTLDELFETMTLMQTGRLAL---VP-LVLFGEKFWRSIINFEALAE-FGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 135
A D++ L ++ EA +A FY+ ++D R
Sbjct: 260 APDDI-DLVHFVETAEEAWEIIARFYE--TVDPRA 291
>gi|297181610|gb|ADI17794.1| predicted rossmann fold nucleotide-binding protein [uncultured
Sphingobacteriales bacterium HF0130_33B19]
Length = 236
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 15/117 (12%)
Query: 13 QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELP 72
+L++ +F RK I A + LPGGVGTLDE+FE + LIQ +IG + P
Sbjct: 125 KLLNFDYFFVRKVMFIKYA--------QGFIVLPGGVGTLDELFEAITLIQTGKIG-KFP 175
Query: 73 VPFLVMNYDSFYKKLLDFLGDC--EDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+ V+ S++ +LD++ + G ++ +++ L++I D+ SEA+ + +FY
Sbjct: 176 I---VLIGSSYWFGILDWIKEVMLAKEGNISPEDL-DLFQIVDTPSEAVDIIEKFYQ 228
>gi|196233374|ref|ZP_03132218.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
gi|196222514|gb|EDY17040.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
Length = 359
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 11/117 (9%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+ +L++ +F RK + + AV PGG GT+DE FE+L L+Q +
Sbjct: 164 DQKLINFNYFFTRKLNFVK--------ETHAVALFPGGFGTMDEGFEVLTLMQTGK-ARI 214
Query: 71 LPVPFLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+PV + + +++K + FL + G V+ D+ SL+K+C S EA++ +A+FY
Sbjct: 215 IPVVMVDRHDGTYWKTWIHFLEEHLLRLGLVSDDDF-SLFKVCASVDEAVAEIAQFY 270
>gi|335033105|ref|ZP_08526477.1| hypothetical protein AGRO_0447 [Agrobacterium sp. ATCC 31749]
gi|333795781|gb|EGL67106.1| hypothetical protein AGRO_0447 [Agrobacterium sp. ATCC 31749]
Length = 298
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AVV PGG GTLDE+FE L LIQ +R+ P+P L++ ++F++ +++F ++GT+
Sbjct: 217 AVVVFPGGFGTLDELFEALTLIQTKRMA---PIP-LILFGENFWRSVVNF-EFLANFGTI 271
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A +++ L ++ +A ++E+Y+
Sbjct: 272 APEDM-DLLHFAETADDAWKIISEYYE 297
>gi|15887723|ref|NP_353404.1| conserved hypothetical protein [Agrobacterium fabrum str. C58]
gi|15155284|gb|AAK86189.1| conserved hypothetical protein [Agrobacterium fabrum str. C58]
Length = 306
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AVV PGG GTLDE+FE L LIQ +R+ P+P L++ ++F++ +++F ++GT+
Sbjct: 225 AVVVFPGGFGTLDELFEALTLIQTKRMA---PIP-LILFGENFWRSVVNF-EFLANFGTI 279
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A +++ L ++ +A ++E+Y+
Sbjct: 280 APEDM-DLLHFAETADDAWKIISEYYE 305
>gi|332527280|ref|ZP_08403345.1| hypothetical protein RBXJA2T_15178 [Rubrivivax benzoatilyticus JA2]
gi|332111697|gb|EGJ11678.1| hypothetical protein RBXJA2T_15178 [Rubrivivax benzoatilyticus JA2]
Length = 298
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDE+FE + LIQ G P P L+ +F++KL++F E
Sbjct: 206 ALVCFPGGFGTLDELFETMTLIQ---TGKSRPRPILLFG-RAFWEKLINFEHLVETGMIG 261
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSI 131
A D +L++ ++ EA +LA FY ++
Sbjct: 262 AGD--LNLFRFVETAEEAWDHLASFYGFDTL 290
>gi|89891599|ref|ZP_01203103.1| putative lysine decarboxylase [Flavobacteria bacterium BBFL7]
gi|89516146|gb|EAS18809.1| putative lysine decarboxylase [Flavobacteria bacterium BBFL7]
Length = 239
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 15/114 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D +F ARK + + V +PGG GTLDE+FE + LIQ +IG P
Sbjct: 130 LDFDYFFARKVMFVKYS--------QGFVVMPGGFGTLDELFEAITLIQTNKIGK---FP 178
Query: 75 FLVMNYDSFYKKLLDFLGDCED--WGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+++ D F+ LLD++ D + T++ +++ L + D++ EA++ + EFY
Sbjct: 179 IILVGSD-FWSGLLDWIKGTLDKKFFTISPEDI-DLLHVVDTSDEAVAIINEFY 230
>gi|392963035|ref|ZP_10328463.1| Conserved hypothetical protein CHP00730 [Pelosinus fermentans DSM
17108]
gi|421056597|ref|ZP_15519514.1| Conserved hypothetical protein CHP00730 [Pelosinus fermentans B4]
gi|421069608|ref|ZP_15530769.1| Conserved hypothetical protein CHP00730 [Pelosinus fermentans A11]
gi|392437777|gb|EIW15639.1| Conserved hypothetical protein CHP00730 [Pelosinus fermentans B4]
gi|392449573|gb|EIW26671.1| Conserved hypothetical protein CHP00730 [Pelosinus fermentans A11]
gi|392451710|gb|EIW28696.1| Conserved hypothetical protein CHP00730 [Pelosinus fermentans DSM
17108]
Length = 195
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGD--CEDWG 98
A +ALPGG GTL+E+ EI+ L QL P +++N + FY KLL+ G C+ +
Sbjct: 101 AFIALPGGYGTLEEILEIITLKQLRYHNK----PIVILNINHFYDKLLEHFGKVICQQF- 155
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
AK E + L+ + S AL Y+ + Y+ +KR
Sbjct: 156 --AKIECSELYFVTGDISSALDYI-DSYEPPVFEKR 188
>gi|357383136|ref|YP_004897860.1| decarboxylase [Pelagibacterium halotolerans B2]
gi|351591773|gb|AEQ50110.1| Decarboxylase family protein [Pelagibacterium halotolerans B2]
Length = 284
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 16/121 (13%)
Query: 16 DLRFFSARK-HGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ +F+ RK H L+ V V PGG GT+DE FE L LIQ R+ +P
Sbjct: 179 NFHYFATRKIHFLMRAKV---------VAIFPGGFGTMDEFFEALTLIQTGRMDR---IP 226
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
L+ F+ ++L+ E+ GT++ D+ L+ D+ EA + + Y+L SI+ R
Sbjct: 227 LLLFG-KKFWSRVLNLEALAEE-GTISPDDF-KLFSFVDTADEAWEIVRKTYNLPSIEHR 283
Query: 135 V 135
Sbjct: 284 A 284
>gi|117924281|ref|YP_864898.1| hypothetical protein Mmc1_0974 [Magnetococcus marinus MC-1]
gi|117608037|gb|ABK43492.1| conserved hypothetical protein 730 [Magnetococcus marinus MC-1]
Length = 229
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGD--CEDWG 98
A++ PGG GTLDE FE L L Q ++G P+ V+ ++ LLD++ D E G
Sbjct: 130 AIIVFPGGFGTLDECFEALTLEQTGKLG-RFPI---VLYGSDYWSGLLDWMRDKMLEQQG 185
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
++ +++ +L KI DS EAL + ++ SS++KR
Sbjct: 186 NISAEDM-NLVKIVDSPEEALQVVTDYLLSSSLEKR 220
>gi|126724397|ref|ZP_01740240.1| decarboxylase family protein [Rhodobacterales bacterium HTCC2150]
gi|126705561|gb|EBA04651.1| decarboxylase family protein [Rhodobacteraceae bacterium HTCC2150]
Length = 283
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ A PGG GTLDE+FE L LIQ R+ +PFL+ + F+ K++++ D GT+
Sbjct: 203 ALCAFPGGFGTLDELFEALTLIQTGRMNR---IPFLLFGKE-FWNKIINWEA-LADAGTI 257
Query: 101 AKDEVASLWKICDSNSEALSYL 122
+ D++ L+K DS +EA+ +
Sbjct: 258 SPDDL-DLFKFVDSAAEAVELI 278
>gi|255693347|ref|ZP_05417022.1| decarboxylase family protein [Bacteroides finegoldii DSM 17565]
gi|260620924|gb|EEX43795.1| TIGR00730 family protein [Bacteroides finegoldii DSM 17565]
Length = 195
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 21/134 (15%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
P+ + +Q ++L+++ RK + + + +VALPGG GTL+E+ E
Sbjct: 68 PRFMVEQNWHHTGLTELIEVESMHERKQKMANLS--------DGIVALPGGCGTLEELLE 119
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
I+ QL G L P +++N + F+ LL+ LG D + + +WK+ + E
Sbjct: 120 IITWKQL---GLYLN-PIVILNVNGFFDPLLEMLGKAID-ENFMRQQHGDIWKVAQTPEE 174
Query: 118 ALSYLAE--FYDLS 129
AL L E +D+S
Sbjct: 175 ALRLLYETPVWDIS 188
>gi|407424623|gb|EKF39063.1| hypothetical protein MOQ_000716 [Trypanosoma cruzi marinkellei]
Length = 327
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDEMFE+L L Q ++I +LP+ V+ SF+K ++++ E +GTV
Sbjct: 244 AIFIAPGGFGTLDEMFELLTLRQTKKI-PDLPI---VLLGSSFWKTVINWEALVE-FGTV 298
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+K E+ SL D+ EA+ ++ F+
Sbjct: 299 SKGEIDSLC-FADTVQEAIEFITGFF 323
>gi|212692520|ref|ZP_03300648.1| hypothetical protein BACDOR_02016 [Bacteroides dorei DSM 17855]
gi|265752687|ref|ZP_06088256.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|212664931|gb|EEB25503.1| TIGR00730 family protein [Bacteroides dorei DSM 17855]
gi|263235873|gb|EEZ21368.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 195
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
++L++ RK + D + V+ALPGG GTL+E+ EI+ QL G L
Sbjct: 82 TRLIETETMHERKRMMADLS--------DGVIALPGGCGTLEELLEIITWKQL---GLYL 130
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
P +++N + FY LL+ L D + E A++WK+ + EA++ L
Sbjct: 131 N-PIIILNINGFYDSLLEMLQRAVD-ENFMRKEHAAIWKVASTAEEAINLL 179
>gi|116250207|ref|YP_766045.1| lysine decarboxylase [Rhizobium leguminosarum bv. viciae 3841]
gi|424873425|ref|ZP_18297087.1| putative Rossmann fold nucleotide-binding protein [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|115254855|emb|CAK05929.1| putative lysine decarboxylase family protein [Rhizobium
leguminosarum bv. viciae 3841]
gi|393169126|gb|EJC69173.1| putative Rossmann fold nucleotide-binding protein [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 288
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE FE L LIQ R+ LP L++ ++F++ +++F E +GT+
Sbjct: 205 AIAVFPGGFGTLDEFFECLTLIQTGRM-ERLP---LILFGEAFWRSIINFDALAE-FGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A D+V L D+ EA + FY+
Sbjct: 260 APDDV-KLISFVDTAEEAWKIVQNFYE 285
>gi|239814783|ref|YP_002943693.1| hypothetical protein Vapar_1777 [Variovorax paradoxus S110]
gi|239801360|gb|ACS18427.1| conserved hypothetical protein [Variovorax paradoxus S110]
Length = 297
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE++ L+Q + PVP +V+ +++KKL+DF E+ G +
Sbjct: 216 ALVAFPGGFGTLDELFEVITLVQTRK---SKPVP-IVLFGSAYWKKLVDFDFLVEE-GVI 270
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ +V L++ D+ +A + FY L
Sbjct: 271 SPADV-KLFEYVDAPEDAWDAIKRFYKL 297
>gi|445062927|ref|ZP_21375217.1| Rossmann fold nucleotide-binding protein [Brachyspira hampsonii
30599]
gi|444505690|gb|ELV06162.1| Rossmann fold nucleotide-binding protein [Brachyspira hampsonii
30599]
Length = 221
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ R+F ARK + A AV+ PGG GT+DEMFE L LIQ + +P
Sbjct: 117 LKFRYFFARKVMFLKYA--------KAVIIFPGGFGTMDEMFETLTLIQTRVLDR---MP 165
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+VMNY S+Y L++++ E +L K ++ E L + FY
Sbjct: 166 LIVMNY-SYYTDLIEWIKKYMIGENYIDLEDLNLIKYAETPQETLDIINSFYQ 217
>gi|237838873|ref|XP_002368734.1| lysine decarboxylase domain-containing protein [Toxoplasma gondii
ME49]
gi|211966398|gb|EEB01594.1| lysine decarboxylase domain-containing protein [Toxoplasma gondii
ME49]
gi|221481372|gb|EEE19766.1| lysine decarboxylase domain-containing protein, putative
[Toxoplasma gondii GT1]
gi|221502093|gb|EEE27839.1| lysine decarboxylase domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 361
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 19/113 (16%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ ++ ARK +I+ A+ V+A PGG GTLDE+ E+LAL Q ++ ++P+
Sbjct: 242 EFQYLFARKFWMINTAL--------GVIAAPGGFGTLDELMEVLALKQSNKLKRDMPIVL 293
Query: 76 LVMNYDS---FYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
L Y + + K+++F GT+++ + L+ I D EA YL F
Sbjct: 294 LGKTYWTSIISFDKMVEF-------GTISQSDCDKLF-ITDDEDEAFEYLRSF 338
>gi|156325887|ref|XP_001618612.1| hypothetical protein NEMVEDRAFT_v1g224968 [Nematostella vectensis]
gi|156199541|gb|EDO26512.1| predicted protein [Nematostella vectensis]
Length = 236
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 10/89 (11%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGD---CEDW 97
+ LPGG GTLDE+FE + LIQ +IG P+ + N F+ LLD++ + E
Sbjct: 146 GFIVLPGGFGTLDELFEAITLIQTHKIG-RFPIILVGKN---FWSGLLDWIKNTLIAE-- 199
Query: 98 GTVAKDEVASLWKICDSNSEALSYLAEFY 126
G +++ +V +L+++ D+ EA+ +L +FY
Sbjct: 200 GNISEKDV-NLFRVVDTADEAIEHLNKFY 227
>gi|118581467|ref|YP_902717.1| hypothetical protein Ppro_3064 [Pelobacter propionicus DSM 2379]
gi|118504177|gb|ABL00660.1| conserved hypothetical protein 730 [Pelobacter propionicus DSM
2379]
Length = 342
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 3 SPKVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALI 62
+P + + +L+ ++F RK + A A+ PGG GTLDE E+ LI
Sbjct: 143 APNPIMYRNKRLITYKYFFNRKVAFVKEA--------NAMAVFPGGFGTLDEAMEVFTLI 194
Query: 63 QLERIGSELPVPFLVM-NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSY 121
Q G P P +++ + D ++++ DF+ + E S++ I S EA++
Sbjct: 195 Q---TGKTSPKPLILIDDQDGYWEQFFDFVKESLLVKGFISGEDFSIFTITKSVDEAVAV 251
Query: 122 LAEFY----DLSSIDKRV 135
+ FY L ID R+
Sbjct: 252 IENFYRTFHSLRFIDNRL 269
>gi|218508527|ref|ZP_03506405.1| hypothetical protein RetlB5_13609 [Rhizobium etli Brasil 5]
Length = 291
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE FE L LIQ R+ LP L++ ++F++++++F E +GT+
Sbjct: 210 AIAVFPGGFGTLDEFFECLTLIQTGRM-ERLP---LILFGEAFWRRIINFEALAE-FGTI 264
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A D+V L D+ A + +FY+
Sbjct: 265 APDDV-KLISFVDTADAAWKIVQDFYE 290
>gi|190890092|ref|YP_001976634.1| hypothetical protein RHECIAT_CH0000462 [Rhizobium etli CIAT 652]
gi|190695371|gb|ACE89456.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 341
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE FE L LIQ R+ LP L++ ++F++++++F E +GT+
Sbjct: 260 AIAVFPGGFGTLDEFFECLTLIQTGRM-ERLP---LILFGEAFWRRIINFEALAE-FGTI 314
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A D+V L D+ A + +FY+
Sbjct: 315 APDDV-KLISFVDTADAAWKIVQDFYE 340
>gi|350560185|ref|ZP_08929025.1| Conserved hypothetical protein CHP00730 [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349782453|gb|EGZ36736.1| Conserved hypothetical protein CHP00730 [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 250
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ R F ARK + A +A V LPGG GTLDE+ EIL L+Q G +P
Sbjct: 133 LGFRHFFARKVMFVKYA--------SAYVVLPGGFGTLDELAEILTLVQ---TGKSRRIP 181
Query: 75 FLVMNYDSFYKKLLD-FLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
+++ +F++ LLD F GT++ ++A L+ + D+ A++ + E+Y+ S +
Sbjct: 182 IVLVG-TAFWRGLLDWFEQTLVPRGTISTGDLA-LYSLVDTPEAAVNAIFEYYEARSFEP 239
Query: 134 RVHE 137
E
Sbjct: 240 SAEE 243
>gi|86356076|ref|YP_467968.1| hypothetical protein RHE_CH00419 [Rhizobium etli CFN 42]
gi|86280178|gb|ABC89241.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 341
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE FE L LIQ R+ LP L++ ++F++++++F E +GT+
Sbjct: 260 AIAVFPGGFGTLDEFFECLTLIQTGRM-ERLP---LILFGEAFWRRIINFEALAE-FGTI 314
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A D+V L D+ A + +FY+
Sbjct: 315 APDDV-KLISFVDTADAAWKIVQDFYE 340
>gi|259417344|ref|ZP_05741263.1| decarboxylase family protein [Silicibacter sp. TrichCH4B]
gi|259346250|gb|EEW58064.1| decarboxylase family protein [Silicibacter sp. TrichCH4B]
Length = 282
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE+FE L LIQ R+ PVPFL+ SF++K++++ D GT+
Sbjct: 190 AICVFPGGFGTLDELFEALTLIQTGRME---PVPFLLFGR-SFWEKIINWEA-LADAGTI 244
Query: 101 AKDEVASLWKICDSNSEALSYL 122
++ ++ L+K +S EA+ +
Sbjct: 245 SEQDL-DLFKFVESADEAIEAI 265
>gi|407853546|gb|EKG06488.1| hypothetical protein TCSYLVIO_002403 [Trypanosoma cruzi]
Length = 376
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDEMFE+L L Q ++I +LP+ V+ SF++ ++++ E +GTV
Sbjct: 290 AIFIAPGGFGTLDEMFELLTLRQTKKI-PDLPI---VLLGSSFWRTVINWEALVE-FGTV 344
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+K+E+ SL D+ EA+ ++ F+
Sbjct: 345 SKEEIDSLC-FADTVQEAIEFIMGFF 369
>gi|72389050|ref|XP_844820.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176331|gb|AAX70443.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70801354|gb|AAZ11261.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 326
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GT+DE+FE+L L Q +I E P+ V+ F+K ++++ E +GT+
Sbjct: 241 AIVIAPGGFGTMDEVFELLTLRQTRKI-PEFPI---VLFCTKFWKTVVNWEALAE-FGTI 295
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+K+EV SL DS EA++++ F+
Sbjct: 296 SKEEVDSLC-FTDSVDEAVAFIRNFF 320
>gi|374315616|ref|YP_005062044.1| hypothetical protein [Sphaerochaeta pleomorpha str. Grapes]
gi|359351260|gb|AEV29034.1| TIGR00730 family protein [Sphaerochaeta pleomorpha str. Grapes]
Length = 230
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A VALPGG+GTL+E+FEI +QL P ++N + +Y +L+ FL D G +
Sbjct: 142 AFVALPGGIGTLEEIFEIFTWLQLGYHTK----PVALLNINGYYDQLITFLHQSSDEGFI 197
Query: 101 AKDEVASLWKICDSNSEAL 119
D + +L I +S E L
Sbjct: 198 HADHLKAL--IIESEPEQL 214
>gi|319956708|ref|YP_004167971.1| hypothetical protein Nitsa_0963 [Nitratifractor salsuginis DSM
16511]
gi|319419112|gb|ADV46222.1| Conserved hypothetical protein CHP00730 [Nitratifractor salsuginis
DSM 16511]
Length = 318
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDE+FEIL L+Q + P+P +++ S++ KL++F E+ GT+
Sbjct: 219 ALVVYPGGFGTLDELFEILTLVQTHKTP---PIPVVIVG-KSYWNKLINFDFLVEE-GTI 273
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A +++ ++ D+ +EA ++ ++++
Sbjct: 274 APEDL-EIFHFADNAAEAWKHILDWHE 299
>gi|302869753|ref|YP_003838390.1| hypothetical protein Micau_5308 [Micromonospora aurantiaca ATCC
27029]
gi|302572612|gb|ADL48814.1| Conserved hypothetical protein CHP00730 [Micromonospora aurantiaca
ATCC 27029]
Length = 287
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 14/111 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D R+F ARK + A A V LPGG GTLDE+FE L L+Q ++ + PV
Sbjct: 151 IDFRYFFARKTMFVKYA--------QAFVVLPGGFGTLDELFEALTLVQTGKV-TRFPVV 201
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
+ +Y ++ LLD+L G G + ++ L ++ D +EA+ ++ E
Sbjct: 202 LMGTDY---WQGLLDWLRGTMATEGKIGPADL-DLIRLTDDVNEAVRHIVE 248
>gi|430762991|ref|YP_007218848.1| DNA processing protein A [Thioalkalivibrio nitratireducens DSM
14787]
gi|430012615|gb|AGA35367.1| DNA processing protein A [Thioalkalivibrio nitratireducens DSM
14787]
Length = 250
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ R F ARK + A +A V LPGG GTLDE+ EIL L+Q G +P
Sbjct: 133 LGFRHFFARKVMFVKYA--------SAYVVLPGGFGTLDELAEILTLVQ---TGKSRRIP 181
Query: 75 FLVMNYDSFYKKLLD-FLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
+++ +F++ LLD F GT++ ++A L+ + D+ A++ + E+Y+ S +
Sbjct: 182 IVLVG-TTFWRGLLDWFEQTLVARGTISTGDLA-LYSLVDTPEAAVNAIFEYYEARSFEP 239
Query: 134 RVHE 137
E
Sbjct: 240 SAEE 243
>gi|261328084|emb|CBH11061.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 328
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GT+DE+FE+L L Q +I E P+ V+ F+K ++++ E +GT+
Sbjct: 243 AIVIAPGGFGTMDEVFELLTLRQTRKI-PEFPI---VLFCTKFWKTVVNWEALAE-FGTI 297
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+K+EV SL DS EA++++ F+
Sbjct: 298 SKEEVDSLC-FTDSVDEAVAFIRNFF 322
>gi|379335229|gb|AFD03216.1| hypothetical protein [uncultured bacterium W4-21b]
Length = 345
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Query: 4 PKVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQ 63
P + +L+ ++F RK + + A+ PGG GT DE FE+L LIQ
Sbjct: 147 PNPYISDDEKLITFKYFFTRKLIFVK--------ESDAIALFPGGFGTQDEAFEVLTLIQ 198
Query: 64 LERIGSELPVPFLVMNYDS--FYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSY 121
G P+P +++ +++ L FL G ++ L+KI DS EA++
Sbjct: 199 ---TGKSEPLPIVMLEQPGRPYWRPWLRFLKQQVLGGGYISEDDFHLFKITDSIEEAVTE 255
Query: 122 LAEFYD 127
+ FY+
Sbjct: 256 ITHFYE 261
>gi|315503765|ref|YP_004082652.1| hypothetical protein ML5_2984 [Micromonospora sp. L5]
gi|315410384|gb|ADU08501.1| Conserved hypothetical protein CHP00730 [Micromonospora sp. L5]
Length = 287
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 14/111 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D R+F ARK + A A V LPGG GTLDE+FE L L+Q ++ + PV
Sbjct: 151 IDFRYFFARKTMFVKYA--------QAFVVLPGGFGTLDELFEALTLVQTGKV-TRFPVV 201
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
+ +Y ++ LLD+L G G + ++ L ++ D +EA+ ++ E
Sbjct: 202 LMGTDY---WQGLLDWLRGTMATEGKIGPADL-DLIRLTDDVNEAVRHIVE 248
>gi|436842541|ref|YP_007326919.1| conserved protein of unknown function [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432171447|emb|CCO24820.1| conserved protein of unknown function [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 218
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 12/109 (11%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
D +F RK I A+ A +A+PGG GTLDE+ E L LIQ +RI P P
Sbjct: 118 DYNYFFIRKVMFIKYAL--------AYIAMPGGYGTLDELSEALVLIQTKRIK---PFPI 166
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
++M + F+ L+D+ D +E +L+ + DS EA++++ +
Sbjct: 167 ILMGTE-FWDGLIDWFKDRLVANGYCDEENLNLFHVTDSPEEAVAHIKK 214
>gi|15964187|ref|NP_384540.1| hypothetical protein SMc01731 [Sinorhizobium meliloti 1021]
gi|334314835|ref|YP_004547454.1| hypothetical protein Sinme_0066 [Sinorhizobium meliloti AK83]
gi|384528172|ref|YP_005712260.1| hypothetical protein [Sinorhizobium meliloti BL225C]
gi|384534531|ref|YP_005718616.1| hypothetical protein SM11_chr0067 [Sinorhizobium meliloti SM11]
gi|407719274|ref|YP_006838936.1| hypothetical protein BN406_00065 [Sinorhizobium meliloti Rm41]
gi|418400243|ref|ZP_12973785.1| hypothetical protein SM0020_09075 [Sinorhizobium meliloti
CCNWSX0020]
gi|433612219|ref|YP_007189017.1| putative Rossmann fold nucleotide-binding protein [Sinorhizobium
meliloti GR4]
gi|15073363|emb|CAC41871.1| Hypothetical protein SMc01731 [Sinorhizobium meliloti 1021]
gi|333810348|gb|AEG03017.1| Conserved hypothetical protein CHP00730 [Sinorhizobium meliloti
BL225C]
gi|334093829|gb|AEG51840.1| Conserved hypothetical protein CHP00730 [Sinorhizobium meliloti
AK83]
gi|336031423|gb|AEH77355.1| hypothetical protein SM11_chr0067 [Sinorhizobium meliloti SM11]
gi|359505712|gb|EHK78232.1| hypothetical protein SM0020_09075 [Sinorhizobium meliloti
CCNWSX0020]
gi|407317506|emb|CCM66110.1| hypothetical protein BN406_00065 [Sinorhizobium meliloti Rm41]
gi|429550409|gb|AGA05418.1| putative Rossmann fold nucleotide-binding protein [Sinorhizobium
meliloti GR4]
Length = 299
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GTLDE+FE + L+Q R+ VP L++ + F++ +++F E +GT+
Sbjct: 205 AVTVFPGGFGTLDELFETMTLMQTGRLAL---VP-LILFGEKFWRSIINFEALAE-FGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
A D+V L ++ EA +A FY+ +D R
Sbjct: 260 APDDV-DLLHFVETAEEAWEIIAGFYE--KVDPR 290
>gi|417103880|ref|ZP_11961229.1| hypothetical protein RHECNPAF_340012 [Rhizobium etli CNPAF512]
gi|327191114|gb|EGE58162.1| hypothetical protein RHECNPAF_340012 [Rhizobium etli CNPAF512]
Length = 248
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE FE L LIQ R+ LP L++ ++F++++++F E +GT+
Sbjct: 167 AIAVFPGGFGTLDEFFECLTLIQTGRM-ERLP---LILFGEAFWRRIINFEALAE-FGTI 221
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A D+V L D+ A + +FY+
Sbjct: 222 APDDV-KLISFVDTADAAWKIVQDFYE 247
>gi|325291806|ref|YP_004277670.1| hypothetical protein AGROH133_03576 [Agrobacterium sp. H13-3]
gi|325059659|gb|ADY63350.1| hypothetical protein AGROH133_03576 [Agrobacterium sp. H13-3]
Length = 305
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 55/87 (63%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AVV PGG GTLDE+FE L LIQ +R+ P+P L++ + F++ +++F D+GT+
Sbjct: 224 AVVIFPGGFGTLDELFETLTLIQTKRMA---PIP-LILFGEKFWRSVVNF-EFLADFGTI 278
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A +++ L ++ +A + ++ +Y+
Sbjct: 279 APEDM-ELLHFAETADDAWNIVSAYYE 304
>gi|114763587|ref|ZP_01442992.1| decarboxylase family protein [Pelagibaca bermudensis HTCC2601]
gi|114543867|gb|EAU46879.1| decarboxylase family protein [Roseovarius sp. HTCC2601]
Length = 280
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDEMFE L LIQ R+ VPFL+ +F++K++++ ED GT+
Sbjct: 190 AICVFPGGFGTLDEMFEALTLIQTGRMER---VPFLLFGR-AFWEKIINWEA-LEDAGTI 244
Query: 101 AKDEVASLWKICDSNSEALSYLAEF 125
+ +++ L++ +S EA + + E+
Sbjct: 245 SPEDL-DLFRFVESADEAAAIIEEW 268
>gi|418407899|ref|ZP_12981216.1| hypothetical protein AT5A_11757 [Agrobacterium tumefaciens 5A]
gi|358005885|gb|EHJ98210.1| hypothetical protein AT5A_11757 [Agrobacterium tumefaciens 5A]
Length = 298
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 55/87 (63%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AVV PGG GTLDE+FE L LIQ +R+ P+P L++ + F++ +++F D+GT+
Sbjct: 217 AVVIFPGGFGTLDELFETLTLIQTKRMA---PIP-LILFGEKFWRSVVNF-EFLADFGTI 271
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A +++ L ++ +A + ++ +Y+
Sbjct: 272 APEDM-ELLHFAETADDAWNIVSAYYE 297
>gi|91788935|ref|YP_549887.1| hypothetical protein Bpro_3075 [Polaromonas sp. JS666]
gi|91698160|gb|ABE44989.1| conserved hypothetical protein 730 [Polaromonas sp. JS666]
Length = 287
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE++ L+Q G PVP +V+ ++K+L +F E+ G +
Sbjct: 206 ALVAFPGGFGTLDELFEVITLVQ---TGKAKPVP-IVLFGSEYWKRLFNFDVLIEE-GAI 260
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
A +++ L++ D A + +FY L
Sbjct: 261 APEDL-KLFQYVDEPQAAWDAIKDFYHL 287
>gi|46579940|ref|YP_010748.1| decarboxylase [Desulfovibrio vulgaris str. Hildenborough]
gi|120602646|ref|YP_967046.1| hypothetical protein Dvul_1602 [Desulfovibrio vulgaris DP4]
gi|387153618|ref|YP_005702554.1| hypothetical protein Deval_1765 [Desulfovibrio vulgaris RCH1]
gi|46449356|gb|AAS96007.1| decarboxylase family protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120562875|gb|ABM28619.1| conserved hypothetical protein 730 [Desulfovibrio vulgaris DP4]
gi|311234062|gb|ADP86916.1| Conserved hypothetical protein CHP00730 [Desulfovibrio vulgaris
RCH1]
Length = 218
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 14/108 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
D R+F RK I A+ A V +PGG+GT+DE+ E L Q RI PF
Sbjct: 118 DFRYFFVRKLMFIKYAL--------AYVVMPGGMGTIDELSEAFVLAQTRRIK-----PF 164
Query: 76 LVMNYDS-FYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
++ Y S F+ LLD++ D G ++E L + D+ + +SY+
Sbjct: 165 PIILYKSEFWNGLLDWIRDRMVTGGYIREEELDLVTVLDTPEQVVSYI 212
>gi|227501618|ref|ZP_03931667.1| possible Rossmann fold nucleotide-binding protein [Corynebacterium
accolens ATCC 49725]
gi|306835786|ref|ZP_07468786.1| possible Rossmann fold nucleotide-binding protein [Corynebacterium
accolens ATCC 49726]
gi|227077643|gb|EEI15606.1| possible Rossmann fold nucleotide-binding protein [Corynebacterium
accolens ATCC 49725]
gi|304568337|gb|EFM43902.1| possible Rossmann fold nucleotide-binding protein [Corynebacterium
accolens ATCC 49726]
Length = 254
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 67/123 (54%), Gaps = 13/123 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + A V LPGG+GT+DE FE+L ++Q ++ + P
Sbjct: 143 LNFRYFFARKTMFLKYS--------QAFVCLPGGMGTMDEFFEVLCMVQTGKVTN---YP 191
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
++M + ++ LL+++ + G ++ L+ + D EA++++ E + + S DKR
Sbjct: 192 IVLMGTE-YWSGLLEWMKNTLAAGGYINEDDQELFLLTDDPDEAVAHIIERHKVMS-DKR 249
Query: 135 VHE 137
+ E
Sbjct: 250 IRE 252
>gi|84503472|ref|ZP_01001527.1| decarboxylase family protein [Oceanicola batsensis HTCC2597]
gi|84388150|gb|EAQ01103.1| decarboxylase family protein [Oceanicola batsensis HTCC2597]
Length = 287
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDEMFE L LIQ R+ VPFL+ D F+++++D+ E GT+
Sbjct: 190 AICVFPGGFGTLDEMFESLTLIQTGRMER---VPFLLFGRD-FWQRIIDWEALAEA-GTI 244
Query: 101 AKDEVASLWKICDSNSEALSYL 122
A ++ L++I ++ EA+ +
Sbjct: 245 APQDL-ELFRIVETAEEAIEAI 265
>gi|222084715|ref|YP_002543244.1| hypothetical protein Arad_0687 [Agrobacterium radiobacter K84]
gi|398379654|ref|ZP_10537774.1| putative Rossmann fold nucleotide-binding protein [Rhizobium sp.
AP16]
gi|221722163|gb|ACM25319.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
gi|397722286|gb|EJK82830.1| putative Rossmann fold nucleotide-binding protein [Rhizobium sp.
AP16]
Length = 290
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 15/125 (12%)
Query: 3 SPKVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALI 62
+P V E + +F+ RK + A A+ PGG GTLDE+FE L LI
Sbjct: 176 APNVYVTPELSF-NFHYFAIRKMHFMVRA--------KAIAVFPGGFGTLDELFECLTLI 226
Query: 63 QLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
Q R+ LP L++ + F++ +++F E +GT+A D+V L D+ +A +
Sbjct: 227 QTGRM-ERLP---LILFGEKFWRDIINFDALAE-FGTIAPDDV-KLISFVDTAEDAWKIV 280
Query: 123 AEFYD 127
++FY+
Sbjct: 281 SDFYE 285
>gi|84515765|ref|ZP_01003126.1| decarboxylase family protein [Loktanella vestfoldensis SKA53]
gi|84510207|gb|EAQ06663.1| decarboxylase family protein [Loktanella vestfoldensis SKA53]
Length = 304
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 16/108 (14%)
Query: 16 DLRFFSARK-HGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ +F+ RK H L+ A A+ PGG GTLDE FE L LIQ R+G VP
Sbjct: 196 NFHYFAIRKMHFLMRAA---------AICVFPGGFGTLDETFEALTLIQTGRMGR---VP 243
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
FL+ +F++K++++ E GT++ D++ L++ ++ EAL +
Sbjct: 244 FLLFGR-AFWEKIINWDALAEA-GTISADDL-DLFRFVETAQEALEAM 288
>gi|150395298|ref|YP_001325765.1| hypothetical protein Smed_0070 [Sinorhizobium medicae WSM419]
gi|150026813|gb|ABR58930.1| conserved hypothetical protein 730 [Sinorhizobium medicae WSM419]
Length = 299
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GTLDE+FE + L+Q R+ VP L++ + F++ +++F E +GT+
Sbjct: 205 AVTVFPGGFGTLDELFETMTLMQTGRLAL---VP-LILFGEKFWRSIINFKALAE-FGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A D++ L ++ EA +A FY+
Sbjct: 260 APDDI-DLLHFVETAEEAWDIIAAFYE 285
>gi|420151625|ref|ZP_14658725.1| TIGR00730 family protein [Actinomyces massiliensis F0489]
gi|394766496|gb|EJF47562.1| TIGR00730 family protein [Actinomyces massiliensis F0489]
Length = 254
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 62/111 (55%), Gaps = 14/111 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK + + V +PGG+GTLDE+FE + L+Q ++ S P
Sbjct: 141 VNFRYFFARKTMFLKYS--------DGFVVMPGGMGTLDELFEAVTLVQTGKVSS---FP 189
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
+++ D +++ L+D++ G D GT++ +V L + D+ EA+ Y+ +
Sbjct: 190 IVLVGSD-YWRGLVDWIRGTLVDSGTISPGDV-DLLPVVDTAQEAVDYVVD 238
>gi|430001993|emb|CCF17773.1| Putative lysine decarboxylase family protein, conserved protein
[Rhizobium sp.]
Length = 283
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 14/113 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ +F+ RK L+ A A+ PGG GTLDEMFE L LIQ R+ +P
Sbjct: 184 LNFHYFAIRKMHLMMRA--------KAIAIFPGGFGTLDEMFEGLTLIQTGRMER---IP 232
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
F++ + F+ +++++ D+GT+A +++ L ++ EA + +FY+
Sbjct: 233 FILFGKE-FWHRIVNWQA-LADFGTIAPEDI-DLISFVETADEAWKIIGDFYE 282
>gi|241202834|ref|YP_002973930.1| hypothetical protein Rleg_0080 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240856724|gb|ACS54391.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 288
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE FE L LIQ R+ LP L++ ++F++ +++F E +GT+
Sbjct: 205 AIAVFPGGFGTLDEFFECLTLIQTGRM-ERLP---LILFGETFWRSIINFEALAE-FGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A D+V L D+ A + +FY+
Sbjct: 260 APDDV-KLISFVDTAEAAWKIVQDFYE 285
>gi|424879782|ref|ZP_18303414.1| putative Rossmann fold nucleotide-binding protein [Rhizobium
leguminosarum bv. trifolii WU95]
gi|392516145|gb|EIW40877.1| putative Rossmann fold nucleotide-binding protein [Rhizobium
leguminosarum bv. trifolii WU95]
Length = 288
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE FE L LIQ R+ LP L++ ++F++ +++F E +GT+
Sbjct: 205 AIAVFPGGFGTLDEFFECLTLIQTGRM-ERLP---LILFGETFWRSIINFEALAE-FGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A D+V L D+ A + +FY+
Sbjct: 260 APDDV-KLISFVDTAEAAWKIVQDFYE 285
>gi|311745420|ref|ZP_07719205.1| decarboxylase family protein [Algoriphagus sp. PR1]
gi|126577970|gb|EAZ82190.1| decarboxylase family protein [Algoriphagus sp. PR1]
Length = 187
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 43 VALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAK 102
+A+PGG+GTL+E+FEI+ L QL I P + N + +Y KL+DFL + G +
Sbjct: 102 IAMPGGIGTLEELFEIMTLNQLHYIQK----PLALYNVNGYYDKLIDFLNHAMEQGFLYP 157
Query: 103 DEVASLWKICDSNSEALSYLAEF 125
++ L + D E L + ++
Sbjct: 158 EQ-EELLIVSDDPVEILDQMGQY 179
>gi|389579688|ref|ZP_10169715.1| TIGR00730 family protein [Desulfobacter postgatei 2ac9]
gi|389401323|gb|EIM63545.1| TIGR00730 family protein [Desulfobacter postgatei 2ac9]
Length = 221
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 12/118 (10%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
++ +D +F RK + A A + +PGG+GT+DEMFE L L+Q RI
Sbjct: 116 TRSLDFNYFFIRKVMFVKYA--------QAYIIMPGGLGTMDEMFETLTLVQTRRIRK-- 165
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
+P ++MN + F+ L+D++ + + L+ + D+ +AL + FY+ S
Sbjct: 166 -MPVILMNKE-FWAGLVDWIKKSLAATGLISAKDMELFSLVDTPEQALKIVNNFYNRS 221
>gi|346224355|ref|ZP_08845497.1| hypothetical protein AtheD1_04232 [Anaerophaga thermohalophila DSM
12881]
Length = 195
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 40 TAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC--EDW 97
+ +VALPGG GTL+E+FE+L+L +L + P P +V+N D FY LL E +
Sbjct: 102 SGIVALPGGTGTLEELFEVLSLKKL----GQYPHPIIVLNTDGFYNGLLQLTAKMVKEKF 157
Query: 98 GTVAKDEVASLWKICD 113
+E +W I D
Sbjct: 158 MRPVHNE---MWNIVD 170
>gi|227820656|ref|YP_002824626.1| lysine decarboxylase [Sinorhizobium fredii NGR234]
gi|227339655|gb|ACP23873.1| conserved hypothetical protein, possible lysine decarboxylase
[Sinorhizobium fredii NGR234]
Length = 299
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 8/94 (8%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GTLDE+FE + L+Q R+ VP LV+ + F++ +++F E +GT+
Sbjct: 205 AVAVFPGGFGTLDELFETMTLMQTGRLAL---VP-LVLFGEKFWRSIINFEALAE-FGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
A +++ L ++ EA +A FY+ ++D R
Sbjct: 260 APNDI-DLVHFVETAEEAWEIIARFYE--TVDPR 290
>gi|347730760|ref|ZP_08863871.1| putative lysine decarboxylase family protein [Desulfovibrio sp. A2]
gi|347520472|gb|EGY27606.1| putative lysine decarboxylase family protein [Desulfovibrio sp. A2]
Length = 218
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
D R+F RK I A+ A V +PGGVGTLDE+ E L Q RI PF
Sbjct: 118 DFRYFFVRKLMFIKYAM--------AYVVMPGGVGTLDELTEAFVLTQTHRIK-----PF 164
Query: 76 LVMNYDS-FYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
++ Y S ++ LLD++ D ++E L+ + D+ + +SY+ +
Sbjct: 165 PIVLYKSDYWNGLLDWIRDKMVSYDFIREEEMELFTVLDTPEQVVSYIKK 214
>gi|313673813|ref|YP_004051924.1| hypothetical protein Calni_1857 [Calditerrivibrio nitroreducens DSM
19672]
gi|312940569|gb|ADR19761.1| Conserved hypothetical protein CHP00730 [Calditerrivibrio
nitroreducens DSM 19672]
Length = 224
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
+++ +F RK L+ A A V PGG GT+DE FE L LIQ ++I L
Sbjct: 120 KKVITFNYFFVRKVMLVKYA--------KAFVIFPGGFGTMDEFFEALTLIQTKKI---L 168
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
P P ++++ F+ LLD++ D KD L K+ + E Y+ F
Sbjct: 169 PFPLILVD-AKFWGGLLDWIKDQMLTNNFIKDTDLELIKVMEEPEEIAEYIKGF 221
>gi|451940120|ref|YP_007460758.1| hypothetical protein BAnh1_00770 [Bartonella australis Aust/NH1]
gi|451899507|gb|AGF73970.1| hypothetical protein BAnh1_00770 [Bartonella australis Aust/NH1]
Length = 279
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE+FE+L L+Q ERI VP L+ + F+K +++F E GT+
Sbjct: 197 ALAIFPGGFGTLDELFEVLTLMQTERIKR---VPILMFG-EQFWKNVINFEYLAEQ-GTI 251
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ + +L + +EA + FY+L
Sbjct: 252 SPLDT-TLMTFVHTAAEAFEVIRSFYEL 278
>gi|330469987|ref|YP_004407730.1| hypothetical protein VAB18032_00230 [Verrucosispora maris
AB-18-032]
gi|328812958|gb|AEB47130.1| hypothetical protein VAB18032_00230 [Verrucosispora maris
AB-18-032]
Length = 278
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D R+F ARK + A A V LPGG GTLDE+FE L L+Q ++ P
Sbjct: 148 IDFRYFFARKTMFVKYA--------QAFVVLPGGFGTLDELFEALTLVQTGKVTR---FP 196
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
++M D +++ LLD+L D
Sbjct: 197 VVLMGSD-YWRGLLDWLRDT 215
>gi|225873543|ref|YP_002755002.1| hypothetical protein ACP_1937 [Acidobacterium capsulatum ATCC
51196]
gi|225791679|gb|ACO31769.1| conserved hypothetical protein TIGR00730 [Acidobacterium capsulatum
ATCC 51196]
Length = 198
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 70/143 (48%), Gaps = 21/143 (14%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
P+VL +E ++L +R RK A+ D D A VALPGG GTLDE E
Sbjct: 66 PEVLKDREIEHRGLAELHVVRSMHERK------AMMADRAD--AFVALPGGYGTLDEFVE 117
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
+L QL RI S+ P L++N +Y LL FL C G + K E +L ++ E
Sbjct: 118 VLTWAQL-RIHSK---PCLLVNVRGYYDGLLSFLDRCVAEGFL-KPENRALIQVAADADE 172
Query: 118 ALSYLAEFYDLSSIDKRVHEVNL 140
AL + E + ++ + H+ L
Sbjct: 173 ALRIMEELWAAGAM--QAHDARL 193
>gi|325954382|ref|YP_004238042.1| hypothetical protein [Weeksella virosa DSM 16922]
gi|323437000|gb|ADX67464.1| Conserved hypothetical protein CHP00730 [Weeksella virosa DSM
16922]
Length = 238
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 14/119 (11%)
Query: 14 LVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPV 73
+V+ +F RK + + + +PGG GTLDE+FE L L+Q ++ G P+
Sbjct: 129 MVNFNYFFVRKVMFVKYS--------QGFIVMPGGFGTLDELFEALTLVQTKKSG-RFPI 179
Query: 74 PFLVMNYDSFYKKLLDFLGDCE-DWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSI 131
V+ F+ L D+L + + G +A+ ++ L+++ D+ EA++++ FY+ +I
Sbjct: 180 ---VLVGKKFWSGLFDWLKNTMLEEGYIAEKDL-ELYRLVDTAEEAVAHIKAFYEKYNI 234
>gi|407784582|ref|ZP_11131731.1| decarboxylase [Celeribacter baekdonensis B30]
gi|407204284|gb|EKE74265.1| decarboxylase [Celeribacter baekdonensis B30]
Length = 286
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDEMFE L LIQ R+ VPFL+ +F++K++++ E GT+
Sbjct: 196 AIAVFPGGFGTLDEMFESLTLIQTGRMSR---VPFLLFG-RAFWEKIINWEALAEA-GTI 250
Query: 101 AKDEVASLWKICDSNSEALSYL 122
A+ ++ L+K ++ EA++ +
Sbjct: 251 ARSDL-DLFKFVETAEEAVAAI 271
>gi|325981762|ref|YP_004294164.1| hypothetical protein NAL212_1092 [Nitrosomonas sp. AL212]
gi|325531281|gb|ADZ26002.1| Conserved hypothetical protein CHP00730 [Nitrosomonas sp. AL212]
Length = 241
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 14/126 (11%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R F ARK+ + A TA V LPGG GTLDE+ E L L+Q + ++P+
Sbjct: 126 FRHFFARKYMFVKFA--------TAYVVLPGGFGTLDELMEALTLVQTGKT-RKMPI--- 173
Query: 77 VMNYDSFYKKLLD-FLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 135
++ Y F+ LLD F G ++ D++ +L ++ D + +S + ++Y+ S +
Sbjct: 174 ILVYSEFWHGLLDWFQHALIAEGFISIDDM-NLIQVIDEPEQVVSAIFQYYETSGFEPSA 232
Query: 136 HEVNLK 141
E ++
Sbjct: 233 AEREIQ 238
>gi|347754126|ref|YP_004861690.1| putative Rossmann fold nucleotide-binding protein [Candidatus
Chloracidobacterium thermophilum B]
gi|347586644|gb|AEP11174.1| putative Rossmann fold nucleotide-binding protein [Candidatus
Chloracidobacterium thermophilum B]
Length = 274
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 58/107 (54%), Gaps = 13/107 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F RK L+ A A+V PGG GTLDE+ E+L L+Q ++ +P+
Sbjct: 162 EFHYFFMRKFWLVYPA--------KALVIFPGGFGTLDELLEVLTLLQTRKLNRRMPI-- 211
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
V+ +++++++L+F WG ++ ++ + ++ +S EA YL
Sbjct: 212 -VIYGEAYWREVLNFEALVR-WGMISSADL-NFFRYANSPEEAFVYL 255
>gi|326389128|ref|ZP_08210708.1| hypothetical protein Y88_3504 [Novosphingobium nitrogenifigens DSM
19370]
gi|326206359|gb|EGD57196.1| hypothetical protein Y88_3504 [Novosphingobium nitrogenifigens DSM
19370]
Length = 303
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GT DE+FE+L LIQ G P+P L+ D ++ ++++F E+ G +
Sbjct: 218 AVAVFPGGFGTFDELFELLTLIQ---TGKMKPIPILLFGSD-YWDRVVNFRAIAEE-GLI 272
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSID 132
D++ L+ ++ E +A+FY L + D
Sbjct: 273 GFDDL-DLFHRVETAQEGWEKIADFYALETGD 303
>gi|225848415|ref|YP_002728578.1| hypothetical protein SULAZ_0592 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644408|gb|ACN99458.1| conserved hypothetical protein [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 223
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 12/112 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ +F ARK L+ A T V PGG GTLDE+FE L LIQ +++ PV
Sbjct: 114 LNFNYFFARKVMLVKYA--------TGFVLFPGGYGTLDEVFETLTLIQTKKL-KPFPVI 164
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
F +Y + LL +L +E +++KI D+ E + Y+ FY
Sbjct: 165 FFGSDY---WDGLLQWLKSKVVANNYIDEEDLNIFKIMDNIDEVVDYIESFY 213
>gi|218674139|ref|ZP_03523808.1| hypothetical protein RetlG_22712 [Rhizobium etli GR56]
Length = 286
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE FE L LIQ R+ LP L++ ++F++ +++F E +GT+
Sbjct: 205 AIAVFPGGFGTLDEFFECLTLIQTGRM-ERLP---LILFGEAFWRSIINFEALAE-FGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A D+V L D+ A + +FY+
Sbjct: 260 APDDV-KLISFVDTADAAWKIVQDFYE 285
>gi|427428376|ref|ZP_18918417.1| Decarboxylase family protein [Caenispirillum salinarum AK4]
gi|425882109|gb|EKV30791.1| Decarboxylase family protein [Caenispirillum salinarum AK4]
Length = 309
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 16/112 (14%)
Query: 16 DLRFFSARK-HGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ +F+ RK H LI A+ PGG GTLDE+FE L LIQ +I P+P
Sbjct: 198 NFHYFAVRKMHFLIRA---------EALACFPGGFGTLDELFEALTLIQTGKIE---PMP 245
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
++ N +++++KL++F E GT++ +++ + K ++ E ++ +FY
Sbjct: 246 VILFN-EAWWRKLVNFDHLVES-GTISPEDL-KIMKFVETAEEGWRFILDFY 294
>gi|408675170|ref|YP_006874918.1| Conserved hypothetical protein CHP00730 [Emticicia oligotrophica
DSM 17448]
gi|387856794|gb|AFK04891.1| Conserved hypothetical protein CHP00730 [Emticicia oligotrophica
DSM 17448]
Length = 242
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 15/114 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ +F ARK C ++ + +PGG GTLDE+FE L LIQ ++I + P+
Sbjct: 133 INFDYFFARKV----CFMKYSQ----GFIVMPGGFGTLDELFEALTLIQTKKI-ARFPI- 182
Query: 75 FLVMNYDSFYKKLLDFLGD--CEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
VM ++K LLD+L CE + +++ L K+ D+ +A+ + EFY
Sbjct: 183 --VMVGSEYWKGLLDWLTQTMCEQEKNINPEDL-KLIKLVDTAEDAVKVIDEFY 233
>gi|424915768|ref|ZP_18339132.1| putative Rossmann fold nucleotide-binding protein [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|392851944|gb|EJB04465.1| putative Rossmann fold nucleotide-binding protein [Rhizobium
leguminosarum bv. trifolii WSM597]
Length = 288
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE FE L LIQ R+ LP L++ ++F++ +++F E +GT+
Sbjct: 205 AIAVFPGGFGTLDEFFECLTLIQTGRM-ERLP---LILFGEAFWRSIINFDALAE-FGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A D+V L D+ A + +FY+
Sbjct: 260 APDDV-KLISFVDTAEAAWKIIQDFYE 285
>gi|386285981|ref|ZP_10063185.1| hypothetical protein DOK_01309 [gamma proteobacterium BDW918]
gi|385281024|gb|EIF44932.1| hypothetical protein DOK_01309 [gamma proteobacterium BDW918]
Length = 291
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 8/94 (8%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKL-LDFLGDCEDWGT 99
AVV PGG GT DE+FE L LIQ G VP +++ ++ + + + L+FL D G
Sbjct: 202 AVVVCPGGFGTFDELFEALTLIQ---TGKSKRVPVILIGHEFWRQAINLEFL---RDEGV 255
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
++ ++V ++ + D+ +A ++ +FY LS ++
Sbjct: 256 ISPEDV-NMISVVDTAEQAWQHIVDFYQLSPGER 288
>gi|187250686|ref|YP_001875168.1| hypothetical protein Emin_0269 [Elusimicrobium minutum Pei191]
gi|186970846|gb|ACC97831.1| Conserved hypothetical protein, DprA/Smf-related [Elusimicrobium
minutum Pei191]
Length = 270
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 14/113 (12%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
+F+ RK L+ A A+V PGG GT DEMFE+L L+Q + S++PV
Sbjct: 172 FHYFAIRKMHLVIRA--------KAIVVFPGGFGTFDEMFEVLTLVQTGK-KSKIPV--- 219
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
V+ F+ ++++ + +G ++ + + L+ I D+ EA + +++FY L
Sbjct: 220 VLVGKQFWTEVVN-VEKLAHYGVISINNL-KLYNIVDTAEEAWNIISKFYKLK 270
>gi|392402002|ref|YP_006438614.1| hypothetical protein Turpa_0452 [Turneriella parva DSM 21527]
gi|390609956|gb|AFM11108.1| hypothetical protein Turpa_0452 [Turneriella parva DSM 21527]
Length = 264
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F RK L++ A A+VA PGG GTLDE+FE+L L+Q ++ LP+
Sbjct: 162 EFHYFFMRKFWLMNMA--------KALVAFPGGYGTLDELFEVLTLVQTRKVQKRLPI-- 211
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
V+ +++K+L+ + W + +++ + D EA +L +
Sbjct: 212 -VLFGKEYWEKVLN-IEAMAKWRMIKYEDIDFI-HFSDDPEEAFRFLTK 257
>gi|406672534|ref|ZP_11079759.1| TIGR00730 family protein [Bergeyella zoohelcum CCUG 30536]
gi|405587078|gb|EKB60806.1| TIGR00730 family protein [Bergeyella zoohelcum CCUG 30536]
Length = 252
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D +F RK I + V +PGG GTLDE+ E L LIQ +I + P+
Sbjct: 144 MDFNYFFVRKVMFIKYS--------QGFVVMPGGFGTLDELSEALTLIQTFKI-ARFPI- 193
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSI 131
++ F+ LLD+ D + +E L+++ D+ EA++++ FYD SI
Sbjct: 194 --ILVGSEFWCGLLDWFKDTLLQQKMISEEDLHLFRVVDTAEEAVAHIKAFYDKYSI 248
>gi|344338651|ref|ZP_08769582.1| Conserved hypothetical protein CHP00730 [Thiocapsa marina 5811]
gi|343801233|gb|EGV19176.1| Conserved hypothetical protein CHP00730 [Thiocapsa marina 5811]
Length = 301
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GT DE+FE L LIQ ++I P+P ++ +F+++++DF D G +
Sbjct: 215 ALVVFPGGFGTFDELFETLCLIQTKKI---RPMPVMLFG-RAFWERVIDFEA-LVDEGVI 269
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
+D++A L+ ++ +A S + YD
Sbjct: 270 GRDDLA-LFSFVETAEDAWSRICAHYD 295
>gi|399032619|ref|ZP_10731968.1| TIGR00730 family protein [Flavobacterium sp. CF136]
gi|398068998|gb|EJL60379.1| TIGR00730 family protein [Flavobacterium sp. CF136]
Length = 242
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 7/88 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGD--CEDWG 98
V +PGG GTLDEMFE + LIQ ++IG P +++ + F+ L++++ E
Sbjct: 151 GFVVMPGGFGTLDEMFEAITLIQTKKIGK---FPIILVGVE-FWSGLIEWVKTVLVEKMH 206
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFY 126
TV+ D++ +L+KI D+ E + L +FY
Sbjct: 207 TVSPDDL-NLFKIVDTEDEVVEVLDKFY 233
>gi|343477346|emb|CCD11795.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 324
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AVV PGG GT+DE+FE+L L Q ++I V F V F++ ++++ D+GT+
Sbjct: 240 AVVIAPGGFGTMDEVFELLTLRQTQKIHKFPIVLFCV----KFWRTVVNWEALV-DYGTI 294
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
+K+EV SL DS EAL ++ F++
Sbjct: 295 SKEEVDSLC-FTDSVDEALLFIRNFFE 320
>gi|270295156|ref|ZP_06201357.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270274403|gb|EFA20264.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 196
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
+QLV++ RK + D + A++ALPGG GTL+E+ EI+ QL G L
Sbjct: 83 TQLVEVESMHERKKTMADLS--------NAIIALPGGCGTLEELLEIITWKQL---GLYL 131
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEA--LSYLAEFYDLS 129
P +++N +++ LLD L D + + ++W + + EA L Y +D S
Sbjct: 132 N-PIVILNVKNYFDPLLDMLRQAVD-ENFMRTQHGAIWHVAQTPQEAVELIYTTPLWDAS 189
>gi|347818064|ref|ZP_08871498.1| hypothetical protein VeAt4_02682, partial [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 285
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE+L L+Q + PVP ++ D ++K+L+ F E+
Sbjct: 204 ALVAFPGGFGTLDELFEVLTLVQTRKAK---PVPIVLFGSD-YWKRLIHFDVMVEEGTIC 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
A+D L+ D +A + FY L
Sbjct: 260 AQD--LDLFHYTDDPRQAWDLIRTFYRL 285
>gi|227497394|ref|ZP_03927626.1| Rossmann fold nucleotide-binding protein [Actinomyces urogenitalis
DSM 15434]
gi|226833265|gb|EEH65648.1| Rossmann fold nucleotide-binding protein [Actinomyces urogenitalis
DSM 15434]
Length = 257
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 14/109 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK + + V +PGG GT+DE+FE L L+Q ++ E PV
Sbjct: 144 VNFRYFFARKTMFVKYS--------DGFVVMPGGFGTMDELFEALTLVQTRKV-KEFPV- 193
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
V+ F+ L+D+L G G ++ D+ L+ + D+ EA+ Y+
Sbjct: 194 --VLVGRQFWSGLVDWLRGTLVTEGVISADD-PGLFHLADTAEEAVDYV 239
>gi|209547675|ref|YP_002279592.1| hypothetical protein Rleg2_0063 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209533431|gb|ACI53366.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 288
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE FE L LIQ R+ LP L++ ++F++ +++F E +GT+
Sbjct: 205 AIAVFPGGFGTLDEFFECLTLIQTGRM-ERLP---LILFGEAFWRNIINFDALAE-FGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A D+V L D+ A + FY+
Sbjct: 260 APDDV-KLISFVDTAEAAWKIIQNFYE 285
>gi|402490557|ref|ZP_10837346.1| hypothetical protein RCCGE510_22529 [Rhizobium sp. CCGE 510]
gi|401810583|gb|EJT02956.1| hypothetical protein RCCGE510_22529 [Rhizobium sp. CCGE 510]
Length = 288
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE FE L LIQ R+ LP L++ ++F++ +++F E +GT+
Sbjct: 205 AIAVFPGGFGTLDEFFECLTLIQTGRM-ERLP---LILFGETFWRSIINFDALAE-FGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A D+V L D+ A + +FY+
Sbjct: 260 APDDV-KLISFVDTAEAAWKIVQDFYE 285
>gi|427712648|ref|YP_007061272.1| Rossmann fold nucleotide-binding protein [Synechococcus sp. PCC
6312]
gi|427376777|gb|AFY60729.1| putative Rossmann fold nucleotide-binding protein [Synechococcus
sp. PCC 6312]
Length = 362
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 13/118 (11%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+ +L+ ++F RK L+ + AV PGG GTLDE FE L L Q G
Sbjct: 150 DPRLIHFKYFFTRKLFLLK--------ESDAVAIFPGGFGTLDEAFECLTLCQ---TGKS 198
Query: 71 LPVPFLVMNYD--SFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
P+P ++++ ++++ D++ + DE L+ I DS +AL+ L FY
Sbjct: 199 PPIPMVLVDRPGGTYWQNWHDYIQRELKGNGLISDEDDQLYTITDSVEQALTNLGNFY 256
>gi|318040296|ref|ZP_07972252.1| Rossmann fold nucleotide-binding protein [Synechococcus sp. CB0101]
Length = 350
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+ +L+ R+F RK + + A+V +PGG GT DE+FE L LIQ R
Sbjct: 142 DGRLLHFRYFFTRKLFFLR--------ESDALVVMPGGFGTFDELFESLTLIQTGRT-PP 192
Query: 71 LPVPFLVMNYDSFYKK-LLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+P+ L + D F+ L D D G ++ ++ SL K + +EA+ ++ FY
Sbjct: 193 IPLVMLAPSGDHFWPDWLQDIQHDLASRGLISPEDT-SLLKQASTAAEAMQHICHFY 248
>gi|424898034|ref|ZP_18321608.1| putative Rossmann fold nucleotide-binding protein [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|393182261|gb|EJC82300.1| putative Rossmann fold nucleotide-binding protein [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 288
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE FE L LIQ R+ LP L++ ++F++ +++F E +GT+
Sbjct: 205 AIAVFPGGFGTLDEFFECLTLIQTGRM-ERLP---LILFGEAFWRSIVNFDALAE-FGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A D+V L D+ A + +FY+
Sbjct: 260 APDDV-KLISFVDTAEAAWKIIQDFYE 285
>gi|406982793|gb|EKE04065.1| hypothetical protein ACD_20C00109G0020 [uncultured bacterium]
Length = 195
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 2 LSPKVLCKQES-QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILA 60
+ K +C +++ +L+ + RK L A R+D A +ALPGG GTLDE+ EI
Sbjct: 71 IKNKGICYEKADELIITKSMQERKDIL---AARSD-----AFIALPGGFGTLDEISEI-- 120
Query: 61 LIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALS 120
I L+++G+ P +++N +++Y L+ F + + K E + I DS + +
Sbjct: 121 -ITLKQVGAHNK-PVIILNINNYYDSLIGFFDNMYSHNFI-KAEYRDSYYIADSVEDCIR 177
Query: 121 YLAEFYDLSSIDKRVHEV 138
Y+ E+ +S D +++
Sbjct: 178 YIEEYTPISFADMFYYQI 195
>gi|424888909|ref|ZP_18312512.1| putative Rossmann fold nucleotide-binding protein [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393174458|gb|EJC74502.1| putative Rossmann fold nucleotide-binding protein [Rhizobium
leguminosarum bv. trifolii WSM2012]
Length = 288
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE FE L LIQ R+ LP L++ ++F++ +++F E +GT+
Sbjct: 205 AIAVFPGGFGTLDEFFECLTLIQTGRM-ERLP---LILFGEAFWRSIVNFDALAE-FGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A D+V L D+ A + +FY+
Sbjct: 260 APDDV-KLISFVDTAEAAWKIIQDFYE 285
>gi|254509766|ref|ZP_05121833.1| conserved hypothetical protein TIGR00730 [Rhodobacteraceae
bacterium KLH11]
gi|221533477|gb|EEE36465.1| conserved hypothetical protein TIGR00730 [Rhodobacteraceae
bacterium KLH11]
Length = 280
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GT+DE+FE L LIQ R+ PVPFL+ +F++K++++ D GT+
Sbjct: 190 AITIFPGGFGTMDELFESLTLIQTGRME---PVPFLLFGR-AFWEKVINWEA-LADAGTI 244
Query: 101 AKDEVASLWKICDSNSEAL 119
+ DE L++ D+ EA+
Sbjct: 245 S-DEDLGLFRFVDTAQEAV 262
>gi|218659207|ref|ZP_03515137.1| hypothetical protein RetlI_05811 [Rhizobium etli IE4771]
Length = 124
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE FE L LIQ R+ LP L++ ++F++ +++F E +GT+
Sbjct: 43 AIAVFPGGFGTLDEFFECLTLIQTGRM-ERLP---LILFGEAFWRSIINFEALAE-FGTI 97
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A D+V L D+ A + +FY+
Sbjct: 98 APDDV-KLISFVDTADAAWKIVQDFYE 123
>gi|423304478|ref|ZP_17282477.1| TIGR00730 family protein [Bacteroides uniformis CL03T00C23]
gi|423310409|ref|ZP_17288393.1| TIGR00730 family protein [Bacteroides uniformis CL03T12C37]
gi|392682160|gb|EIY75509.1| TIGR00730 family protein [Bacteroides uniformis CL03T12C37]
gi|392683928|gb|EIY77260.1| TIGR00730 family protein [Bacteroides uniformis CL03T00C23]
Length = 196
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
+QLV++ RK + D + AV+ALPGG GTL+E+ EI+ QL G L
Sbjct: 83 TQLVEVESMHQRKKTMADLS--------DAVIALPGGCGTLEELLEIITWKQL---GLYL 131
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEA--LSYLAEFYDLS 129
P +++N +++ LLD L D + + ++W + + EA L Y +D S
Sbjct: 132 N-PIVILNVKNYFDPLLDMLRQAVD-ENFMRTQHGAIWHVAQTPQEAVELIYTTPLWDAS 189
>gi|387824878|ref|YP_005824349.1| hypothetical protein FN3523_1295 [Francisella cf. novicida 3523]
gi|332184344|gb|AEE26598.1| hypothetical protein FN3523_1295 [Francisella cf. novicida 3523]
Length = 237
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 29/128 (22%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
R+F RK I ++ + + +PGG GTLDE+F+I LIQ G ++ +P ++
Sbjct: 127 RYFFTRKAMFIKHSM--------SYIVMPGGFGTLDELFDITTLIQ---TGKKVKMPIIL 175
Query: 78 MNYDSFYKKLLDFLGDCEDW--------GTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
Y K DF G +W G V+K+EV +L + DS E + +AE Y +
Sbjct: 176 ------YGK--DFWGGLMEWIKTTLVTKGVVSKEEV-NLLTLVDSIDETIEIIAEHY-MH 225
Query: 130 SIDKRVHE 137
+ + HE
Sbjct: 226 TYSSKAHE 233
>gi|380302027|ref|ZP_09851720.1| hypothetical protein BsquM_08111 [Brachybacterium squillarum M-6-3]
Length = 244
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 14/111 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
VD R+F ARK + + + V +PGG GT DE+FE + L+Q +I PV
Sbjct: 143 VDFRYFFARKTMFVKYS--------SGFVVMPGGFGTFDELFEAVCLMQTHKI-RMFPVV 193
Query: 75 FLVMNYDSFYKKLLDFLGDCE-DWGTVAKDEVASLWKICDSNSEALSYLAE 124
+ +Y ++ LLD++ D G + + +V L ++ DS EAL+ L E
Sbjct: 194 LVGRDY---WQGLLDWISTAVLDRGMIGEGDVEQL-RVVDSAEEALAVLRE 240
>gi|304392400|ref|ZP_07374341.1| decarboxylase family protein [Ahrensia sp. R2A130]
gi|303295504|gb|EFL89863.1| decarboxylase family protein [Ahrensia sp. R2A130]
Length = 295
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 14/114 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F+ RK + A ++V PGG GTLDE FE L LIQ R+ VP
Sbjct: 195 NFHYFAIRKMHFLMRA--------SSVAVFPGGFGTLDEFFETLTLIQTGRMER---VPV 243
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
L+ SF+ ++++ E+ GT++ D+ L+ + D+ E +++FY L+
Sbjct: 244 LLFG-KSFWGRVINMEALAEE-GTISPDDT-DLFTVVDTAEEGWKVVSDFYGLT 294
>gi|212703406|ref|ZP_03311534.1| hypothetical protein DESPIG_01449 [Desulfovibrio piger ATCC 29098]
gi|212673151|gb|EEB33634.1| TIGR00730 family protein [Desulfovibrio piger ATCC 29098]
Length = 221
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 13/108 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ R+F RK + A+ A V +PGG+GT+DE+ E L Q RI P P
Sbjct: 120 NFRYFFTRKFMFVKYAM--------AYVVMPGGMGTIDELSEAFVLAQTGRI---RPFPI 168
Query: 76 LVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
++ N S++ LL++L + G + ++E+ L +CD+ + + +L
Sbjct: 169 ILYN-SSYWAGLLEWLRTSMANGGFINREEIDKLVTVCDTPEQVVEHL 215
>gi|390942687|ref|YP_006406448.1| hypothetical protein Belba_1054 [Belliella baltica DSM 15883]
gi|390416115|gb|AFL83693.1| TIGR00730 family protein [Belliella baltica DSM 15883]
Length = 243
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 13 QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELP 72
+L+ +F RK A V LPGG GTLDE+FE L LIQ +IG P
Sbjct: 133 KLITFNYFFVRKVMFTKYA--------QGFVVLPGGFGTLDELFEALTLIQTNKIG-RFP 183
Query: 73 VPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+ V+ S++ L+D+L +E L+ + + SEA+ + EFY
Sbjct: 184 I---VLVGKSYWSGLVDWLKATMLENKNINEEDLELFSVVEDASEAVKVIDEFY 234
>gi|46447437|ref|YP_008802.1| hypothetical protein pc1803 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401078|emb|CAF24527.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 356
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 73/135 (54%), Gaps = 15/135 (11%)
Query: 7 LCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLER 66
L + +L++ R+F RK + + A+ A PGGVGT DE+FE+L L+Q +
Sbjct: 164 LLAGDPKLINFRYFFTRKLMFLSHS--------DAIAAFPGGVGTQDELFEVLTLMQTGK 215
Query: 67 IGSELPVPFLVMNYDSFYKKLLDFLGDCEDW---GTVAKDEVASLWKICDSNSEALSYLA 123
+ LPV + S+++ D+L C++ G ++ +++ +L+ + S ++A++++
Sbjct: 216 -ANILPVVLIEGENGSYWRAWQDYL--CQNLLANGWISPEDL-NLFYLSSSVNDAVAHIQ 271
Query: 124 EFYDLSSIDKRVHEV 138
+FY + V +V
Sbjct: 272 QFYRRYHSSRYVKDV 286
>gi|163757854|ref|ZP_02164943.1| putative lysine decarboxylase family protein [Hoeflea phototrophica
DFL-43]
gi|162285356|gb|EDQ35638.1| putative lysine decarboxylase family protein [Hoeflea phototrophica
DFL-43]
Length = 280
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE+FE L LIQ +R+ VP ++ + F+ ++DF D+GT+
Sbjct: 199 AITIFPGGFGTLDELFESLTLIQTKRMEH---VPLILFGSE-FWNSIVDFQA-LADFGTI 253
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
A +++ L + D+ EA + + Y L
Sbjct: 254 APEDL-DLLRFVDTADEAWAIIERHYGL 280
>gi|392410960|ref|YP_006447567.1| TIGR00730 family protein [Desulfomonile tiedjei DSM 6799]
gi|390624096|gb|AFM25303.1| TIGR00730 family protein [Desulfomonile tiedjei DSM 6799]
Length = 218
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D R+F RK + AV A + LPGG GT+DEMFE L LIQ RI P P
Sbjct: 116 IDFRYFFVRKVMFVKYAV--------AYIILPGGFGTMDEMFEALTLIQTNRIK---PFP 164
Query: 75 FLVMNYDSFYKKLLDFL 91
+++ D ++K L+ ++
Sbjct: 165 VILLGKD-YWKDLISWI 180
>gi|126732704|ref|ZP_01748500.1| decarboxylase family protein [Sagittula stellata E-37]
gi|126706834|gb|EBA05904.1| decarboxylase family protein [Sagittula stellata E-37]
Length = 280
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 6/79 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GTLDE+FE L LIQ R+ PVPFL+ +F++K++++ D GT+
Sbjct: 190 AVCVFPGGFGTLDELFEALTLIQTGRM---TPVPFLLFGR-AFWEKIINWQA-LADAGTI 244
Query: 101 AKDEVASLWKICDSNSEAL 119
+ +++ L++ ++ EA+
Sbjct: 245 SAEDL-DLFRFVETAEEAV 262
>gi|305681935|ref|ZP_07404739.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
gi|305658408|gb|EFM47911.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
Length = 254
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 14/109 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK + + A V LPGG GTLDE+FE+L ++Q ++ + P
Sbjct: 148 VNFRYFFARKTMFLKYS--------QAFVCLPGGFGTLDELFEVLCMVQTGKVTN---YP 196
Query: 75 FLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALSYL 122
++M D F++ L+ +L D G +A D++ L+ + DS EA++++
Sbjct: 197 IVLMGVD-FWQPLVQWLTDRLVAEGMIAADDL-ELFLLTDSVDEAVAHI 243
>gi|395803848|ref|ZP_10483090.1| hypothetical protein FF52_18280 [Flavobacterium sp. F52]
gi|395433967|gb|EJF99918.1| hypothetical protein FF52_18280 [Flavobacterium sp. F52]
Length = 242
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 7/88 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGD--CEDWG 98
V +PGG GTLDEMFE + LIQ ++IG P +++ + F+ L+D++ E
Sbjct: 151 GFVVMPGGFGTLDEMFEAITLIQTKKIGK---FPIILVGVE-FWSGLIDWVKTVLVEKMH 206
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFY 126
TV+ +++ +L+KI D+ E + L +FY
Sbjct: 207 TVSPEDL-NLFKIVDTEDEVVEALDKFY 233
>gi|343084205|ref|YP_004773500.1| hypothetical protein [Cyclobacterium marinum DSM 745]
gi|342352739|gb|AEL25269.1| Conserved hypothetical protein CHP00730 [Cyclobacterium marinum DSM
745]
Length = 196
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 43 VALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAK 102
+A+PGG+GTL+E+FE++ L QL I P + N +Y KLLDFL + G +
Sbjct: 105 IAMPGGIGTLEELFEVMTLNQLMYIQK----PLALYNVSGYYDKLLDFLAHVGEQGFLKP 160
Query: 103 DEVASL 108
D++ ++
Sbjct: 161 DQLKNV 166
>gi|88802446|ref|ZP_01117973.1| hypothetical protein PI23P_07650 [Polaribacter irgensii 23-P]
gi|88781304|gb|EAR12482.1| hypothetical protein PI23P_07650 [Polaribacter irgensii 23-P]
Length = 235
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC--EDWG 98
V +PGG GT+DE+FE + LIQ +IG P+ V+ F+ LLD++ + E+
Sbjct: 145 GFVVMPGGFGTMDELFEAITLIQTNKIG-RFPI---VLIGTKFWSGLLDWIKNTLIEEGN 200
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFY 126
KD +L+++ D+ EA++++ +FY
Sbjct: 201 ISEKD--LNLFRVVDTADEAIAHINKFY 226
>gi|348170882|ref|ZP_08877776.1| lysine decarboxylase family protein [Saccharopolyspora spinosa NRRL
18395]
Length = 261
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK I A A V LPGG GT+DE+FE L L+Q +++ ++ PV
Sbjct: 155 VNFRYFFVRKTMFIKYA--------QAFVCLPGGFGTMDELFESLTLVQTKKV-TKFPV- 204
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
V+ S+++ L D++ D D+ +L + D +A+S + E Y+
Sbjct: 205 --VLFGKSYWQGLYDWIRDSMHGAGKIGDKDLALLHLTDDIDDAVSIVQEAYE 255
>gi|333029507|ref|ZP_08457568.1| Conserved hypothetical protein CHP00730 [Bacteroides coprosuis DSM
18011]
gi|332740104|gb|EGJ70586.1| Conserved hypothetical protein CHP00730 [Bacteroides coprosuis DSM
18011]
Length = 196
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A++A+PGG GTL+E+ EI+ QL G L P +++N +SF+ LL+ L D +
Sbjct: 104 AIIAMPGGCGTLEELLEIITWKQL---GLYLN-PIIILNINSFFDPLLEMLEKAIDENFM 159
Query: 101 AKDEVASLWKICDSNSEALSYL 122
++ A +W++ +S EAL +
Sbjct: 160 SQQH-AEIWRVANSAEEALDMI 180
>gi|443318823|ref|ZP_21048066.1| putative Rossmann fold nucleotide-binding protein [Leptolyngbya sp.
PCC 6406]
gi|442781561|gb|ELR91658.1| putative Rossmann fold nucleotide-binding protein [Leptolyngbya sp.
PCC 6406]
Length = 355
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 27/125 (21%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+ +L+D ++F RK + + A+ PGG GT DE FE L LIQ + G
Sbjct: 152 DPKLIDFKYFFTRKLFFLK--------ESDALALFPGGFGTQDEAFESLTLIQTGKAG-- 201
Query: 71 LPVPFLVM---------NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSY 121
P+P +++ N+D + +K L + D G ++ D+V SL+ I DS +EA +
Sbjct: 202 -PLPVVLVDYPGGDYWHNWDQYIRKQL--MAD----GLISPDDV-SLYTITDSVTEACAA 253
Query: 122 LAEFY 126
+ +FY
Sbjct: 254 VTDFY 258
>gi|86134019|ref|ZP_01052601.1| possible lysine decarboxylase [Polaribacter sp. MED152]
gi|85820882|gb|EAQ42029.1| possible lysine decarboxylase [Polaribacter sp. MED152]
Length = 235
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
V +PGG GT+DE+FE + LIQ ++IG P+ V+ F+ LLD++ D
Sbjct: 145 GFVVMPGGFGTMDELFEAITLIQTKKIG-RFPI---VLVGSKFWSGLLDWIKDTLITEKN 200
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
E SL+++ D+ EA+ + +FY
Sbjct: 201 IGLEDLSLFRVVDTAEEAVEHFNKFY 226
>gi|94986786|ref|YP_594719.1| Rossmann fold nucleotide-binding protein [Lawsonia intracellularis
PHE/MN1-00]
gi|442555614|ref|YP_007365439.1| lysine decarboxylase family protein [Lawsonia intracellularis N343]
gi|94731035|emb|CAJ54398.1| predicted Rossmann fold nucleotide-binding protein [Lawsonia
intracellularis PHE/MN1-00]
gi|441493061|gb|AGC49755.1| lysine decarboxylase family protein [Lawsonia intracellularis N343]
Length = 233
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 15/130 (11%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ R+F RK + A A V +PGG+GT+DE E L Q +RI P
Sbjct: 115 TEYRYFFIRKLMFVKYA--------QAYVVMPGGMGTIDEFSEAFVLTQTKRIH-----P 161
Query: 75 FLVMNYDS-FYKKLLDFLGDC-EDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSID 132
F ++ Y+S F+ L+D++ G + E+ +L ICD+ E L + E +
Sbjct: 162 FPIILYNSQFWNGLVDWMRQTMSKEGFIEPSEIDALLNICDTPEEVLKIIQEKVPTAITH 221
Query: 133 KRVHEVNLKS 142
K+ L S
Sbjct: 222 KKNKHKQLHS 231
>gi|434381881|ref|YP_006703664.1| putative Rossmann fold nucleotide-binding protein [Brachyspira
pilosicoli WesB]
gi|404430530|emb|CCG56576.1| putative Rossmann fold nucleotide-binding protein [Brachyspira
pilosicoli WesB]
Length = 219
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 14/114 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ R+F ARK + A A+V PGG GT+DEMFE L L+Q + + +P
Sbjct: 117 IKFRYFFARKVMFVKYA--------KALVVFPGGFGTMDEMFETLTLVQTKVLNK---IP 165
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+V + FY L++++ D + + KD++ ++ D E LS + FY+
Sbjct: 166 IIVFD-KKFYTGLMNWIEKDMINEKYIDKDDLNLMYH-TDDPKEVLSIINNFYN 217
>gi|334336473|ref|YP_004541625.1| hypothetical protein Isova_0947 [Isoptericola variabilis 225]
gi|334106841|gb|AEG43731.1| Conserved hypothetical protein CHP00730 [Isoptericola variabilis
225]
Length = 277
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK + A + +PGG GT DE+FE L L+Q ++ + P+
Sbjct: 151 VNFRYFFARKTMFVKYA--------QGFIVMPGGFGTFDELFEALTLVQTHKV-TGFPIA 201
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
+ Y + LL++L G D G +A +V L + DS +A+SY+ E
Sbjct: 202 LVGSEY---WGGLLEWLRGAVLDRGMIADADV-DLLHVSDSAQDAVSYVLE 248
>gi|218885277|ref|YP_002434598.1| hypothetical protein DvMF_0170 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756231|gb|ACL07130.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 218
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 14/108 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
D R+F RK I A+ A V +PGGVGTLDE+ E L Q RI PF
Sbjct: 118 DFRYFFVRKLMFIKYAM--------AYVVMPGGVGTLDELTEAFVLTQTHRIK-----PF 164
Query: 76 LVMNYDS-FYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
++ Y S ++ LLD++ D ++E L+ + D+ + ++Y+
Sbjct: 165 PIILYKSDYWNGLLDWIRDKMVSYDFIREEEMELFTVLDTPEQVVAYI 212
>gi|404476195|ref|YP_006707626.1| Rossmann fold nucleotide-binding protein [Brachyspira pilosicoli
B2904]
gi|404437684|gb|AFR70878.1| putative Rossmann fold nucleotide-binding protein [Brachyspira
pilosicoli B2904]
Length = 219
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 14/114 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ R+F ARK + A A+V PGG GT+DEMFE L L+Q + + +P
Sbjct: 117 IKFRYFFARKVMFVKYA--------KALVVFPGGFGTMDEMFETLTLVQTKVLNK---IP 165
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+V + FY L++++ D + + KD++ +L D E LS + FY+
Sbjct: 166 IIVFD-KKFYTGLMNWIEKDMINEKYIDKDDL-NLMHHTDDPKEVLSIINNFYN 217
>gi|397171686|ref|ZP_10495085.1| Rossmann fold nucleotide-binding protein [Alishewanella aestuarii
B11]
gi|396086694|gb|EJI84305.1| Rossmann fold nucleotide-binding protein [Alishewanella aestuarii
B11]
Length = 293
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+F+ RK + A A+VA PGG GTLDE+FE L LIQ R +PV
Sbjct: 193 QFHYFAIRKMHFLQRA--------RALVAFPGGFGTLDELFETLTLIQT-RKAERVPV-- 241
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
++ +F+++L++F E+ G ++ ++ L + DS +A + +FY L
Sbjct: 242 -ILYDKAFWQRLINFEMLAEE-GLISPQDL-ELIQYVDSPEQAWQVIYDFYQL 291
>gi|103486112|ref|YP_615673.1| hypothetical protein Sala_0619 [Sphingopyxis alaskensis RB2256]
gi|98976189|gb|ABF52340.1| conserved hypothetical protein 730 [Sphingopyxis alaskensis RB2256]
Length = 291
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GT DEMFE+L LIQ +I P+P +V+ F++++++F E+
Sbjct: 205 AVCVFPGGFGTFDEMFELLTLIQTGKIK---PIP-IVLFGKEFWQRVVNFEALVEEGVVS 260
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
A+D L++ ++ EA + +FY
Sbjct: 261 ARD--LGLFQFVETADEAWKIIQDFY 284
>gi|375109084|ref|ZP_09755338.1| Rossmann fold nucleotide-binding protein [Alishewanella jeotgali
KCTC 22429]
gi|374571270|gb|EHR42399.1| Rossmann fold nucleotide-binding protein [Alishewanella jeotgali
KCTC 22429]
Length = 293
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+F+ RK + A A+VA PGG GTLDE+FE L LIQ R +PV
Sbjct: 193 QFHYFAIRKMHFLQRA--------RALVAFPGGFGTLDELFETLTLIQT-RKAERVPV-- 241
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
++ +F+++L++F E+ G ++ ++ L + DS +A + +FY L
Sbjct: 242 -ILYDKAFWQRLINFEMLAEE-GLISPQDL-ELIQYVDSPEQAWQVIYDFYQL 291
>gi|300869877|ref|YP_003784748.1| putative Rossmann fold nucleotide-binding protein [Brachyspira
pilosicoli 95/1000]
gi|431807064|ref|YP_007233962.1| Rossmann fold nucleotide-binding protein [Brachyspira pilosicoli
P43/6/78]
gi|300687576|gb|ADK30247.1| predicted Rossmann fold nucleotide binding protein [Brachyspira
pilosicoli 95/1000]
gi|430780423|gb|AGA65707.1| putative Rossmann fold nucleotide-binding protein [Brachyspira
pilosicoli P43/6/78]
Length = 219
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 14/114 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ R+F ARK + A A+V PGG GT+DEMFE L L+Q + + +P
Sbjct: 117 IKFRYFFARKVMFVKYA--------KALVVFPGGFGTMDEMFETLTLVQTKVLNK---IP 165
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+V + FY L++++ D + + KD++ +L D E LS + FY+
Sbjct: 166 IIVFD-KKFYTGLMNWIEKDMINEKYIDKDDL-NLMHHTDDPKEVLSIINNFYN 217
>gi|404486956|ref|ZP_11022143.1| TIGR00730 family protein [Barnesiella intestinihominis YIT 11860]
gi|404335452|gb|EJZ61921.1| TIGR00730 family protein [Barnesiella intestinihominis YIT 11860]
Length = 195
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV+ALPGG GT++E+FEI+ QL + P +++N D +Y L++ L +
Sbjct: 103 AVIALPGGCGTMEELFEIITWKQLGLFLN----PIVILNIDGYYNPLIEMLHNAIG-ENF 157
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVHEV 138
+ E A +W++ + EA+ + ++ DK + ++
Sbjct: 158 MRQEHARMWQVAQTPQEAVDAI---QNMPVWDKNIRKI 192
>gi|254477397|ref|ZP_05090783.1| decarboxylase family protein [Ruegeria sp. R11]
gi|214031640|gb|EEB72475.1| decarboxylase family protein [Ruegeria sp. R11]
Length = 282
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDEMFE L LIQ R+ VPFL+ +F++K++++ D GT+
Sbjct: 190 AITIFPGGFGTLDEMFESLTLIQTGRMER---VPFLLFGR-AFWEKIINWDA-LADAGTI 244
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
+ DE L++ ++ EAL + + + DK
Sbjct: 245 S-DEDLDLFRFVETAEEALHIIDNWEPAPARDK 276
>gi|220933278|ref|YP_002512177.1| hypothetical protein Tgr7_0086 [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219994588|gb|ACL71190.1| conserved hypothetical protein [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 241
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 14/122 (11%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R F +RK + A +A V LPGG GTLDE+ EIL L+Q G +P +
Sbjct: 126 FRHFFSRKVMFVKYA--------SAYVVLPGGFGTLDELAEILTLVQ---TGKTRRIP-I 173
Query: 77 VMNYDSFYKKLLDFLGDC-EDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 135
++ + +F+K LLD+ D GT+ + ++ L+ + D S+A++ + ++Y+ +
Sbjct: 174 ILVHSAFWKGLLDWFEDTLVAQGTIDESDL-KLYTLVDEPSDAVNAIFDYYEARGFEPSP 232
Query: 136 HE 137
E
Sbjct: 233 EE 234
>gi|313676589|ref|YP_004054585.1| hypothetical protein Ftrac_2499 [Marivirga tractuosa DSM 4126]
gi|312943287|gb|ADR22477.1| Conserved hypothetical protein CHP00730 [Marivirga tractuosa DSM
4126]
Length = 243
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 15/116 (12%)
Query: 13 QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELP 72
+L+ +F RK + A V +PGG GT+DE+FE L LIQ +IG P
Sbjct: 132 KLITFDYFFVRKVMFVKYA--------QGFVVMPGGFGTMDELFEALTLIQTHKIG-RFP 182
Query: 73 VPFLVMNYDSFYKKLLDFLGDC--EDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+ V+ F+ L+D++ D E V+ +++ L+ + D+ +EA+ + FY
Sbjct: 183 I---VLVGKKFWSGLIDWIKDTLIEAENNVSPEDM-DLFTVVDTPTEAVKVIDNFY 234
>gi|423315996|ref|ZP_17293901.1| TIGR00730 family protein [Bergeyella zoohelcum ATCC 43767]
gi|405585001|gb|EKB58841.1| TIGR00730 family protein [Bergeyella zoohelcum ATCC 43767]
Length = 252
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D +F RK + + V +PGG GTLDE+ E L LIQ +I + P+
Sbjct: 144 MDFNYFFVRKVMFVKYS--------QGFVVMPGGFGTLDELSEALTLIQTFKI-ARFPI- 193
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSI 131
++ F+ LLD+ D + +E L+++ D+ EA++++ FYD SI
Sbjct: 194 --ILVGSEFWCGLLDWFKDTLLQQKMISEEDLHLFRVVDTAEEAVAHIKAFYDKYSI 248
>gi|160891756|ref|ZP_02072759.1| hypothetical protein BACUNI_04212 [Bacteroides uniformis ATCC 8492]
gi|156859163|gb|EDO52594.1| TIGR00730 family protein [Bacteroides uniformis ATCC 8492]
Length = 206
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
+QLV++ RK + D + AV+ALPGG GTL+E+ EI+ QL G L
Sbjct: 93 TQLVEVESMHQRKKTMADLS--------DAVIALPGGCGTLEELLEIITWKQL---GLYL 141
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEA--LSYLAEFYDLS 129
P +++N +++ LLD L D + + ++W + + EA L Y +D S
Sbjct: 142 N-PIVILNVKNYFDPLLDMLRQAVD-ENFMRVQHGAIWHVAQTPQEAVELMYTTPLWDAS 199
>gi|269795878|ref|YP_003315333.1| hypothetical protein Sked_25950 [Sanguibacter keddieii DSM 10542]
gi|269098063|gb|ACZ22499.1| conserved hypothetical protein, DprA/Smf-related, family 2
[Sanguibacter keddieii DSM 10542]
Length = 280
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 14/106 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK + A + V LPGG GTLDEMFE L L+Q ++ +E P+
Sbjct: 148 VNFRYFFARKTMFVKYA--------SGFVVLPGGFGTLDEMFEALTLVQTHKV-TEFPIV 198
Query: 75 FLVMNYDSFYKKLLDFLGDCE-DWGTVAKDEVASLWKICDSNSEAL 119
+ +Y + LLD+L + G + ++A L+ I D EA+
Sbjct: 199 LVGKDY---WTGLLDWLSTAVLERGMIHAKDLA-LFSIVDDADEAV 240
>gi|254465812|ref|ZP_05079223.1| decarboxylase family protein [Rhodobacterales bacterium Y4I]
gi|206686720|gb|EDZ47202.1| decarboxylase family protein [Rhodobacterales bacterium Y4I]
Length = 282
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE+FE L LIQ R+ VPFL+ D F+ K++++ D GT+
Sbjct: 190 AISVFPGGFGTLDELFESLTLIQTGRMER---VPFLLFGKD-FWDKIINWAA-LADAGTI 244
Query: 101 AKDEVASLWKICDSNSEAL 119
++ ++ L+++ D+ EA+
Sbjct: 245 SEQDL-DLFRVVDTAQEAV 262
>gi|393764472|ref|ZP_10353082.1| Rossmann fold nucleotide-binding protein [Alishewanella agri BL06]
gi|392604601|gb|EIW87502.1| Rossmann fold nucleotide-binding protein [Alishewanella agri BL06]
Length = 293
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 14/113 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+F+ RK + A A+VA PGG GTLDE+FE L LIQ ++ +PV
Sbjct: 193 QFHYFAIRKMHFLQRA--------RALVAFPGGFGTLDELFETLTLIQTKK-AERVPV-- 241
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
++ +F+++L++F E+ G ++ ++ L + DS +A + +FY L
Sbjct: 242 -ILYDKAFWQRLINFEMLAEE-GLISPQDL-ELIQYVDSPEQAWQVIYDFYQL 291
>gi|227548429|ref|ZP_03978478.1| possible Rossmann fold nucleotide-binding protein [Corynebacterium
lipophiloflavum DSM 44291]
gi|227079473|gb|EEI17436.1| possible Rossmann fold nucleotide-binding protein [Corynebacterium
lipophiloflavum DSM 44291]
Length = 275
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 70/125 (56%), Gaps = 15/125 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + A + LPGG GTLDE+FE+L ++Q ++ + P
Sbjct: 164 LNFRYFFARKTMFLKYS--------QAFITLPGGYGTLDEVFEVLCMVQTGKVTN---FP 212
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
++M D F+ L+D++ G G +++ + L+ + DS EA++Y+ E + + + D+
Sbjct: 213 IVLMGVD-FWSGLVDWIRGQQLARGLISEGD-DQLFLVTDSVDEAVAYIVEAHKVMT-DQ 269
Query: 134 RVHEV 138
R+ V
Sbjct: 270 RLKGV 274
>gi|337280101|ref|YP_004619573.1| hypothetical protein Rta_24560 [Ramlibacter tataouinensis TTB310]
gi|334731178|gb|AEG93554.1| Conserved hypothetical protein [Ramlibacter tataouinensis TTB310]
Length = 287
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE++ L+Q R ++P+ V+ ++KKL++F D G +
Sbjct: 206 ALVAFPGGFGTLDELFEVITLVQ-TRKAKQVPI---VLFGSEYWKKLINFEAMV-DEGVI 260
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ D++ L++ D A + FY L
Sbjct: 261 SPDDL-KLFEYADDPQRAWDVIRAFYRL 287
>gi|153807139|ref|ZP_01959807.1| hypothetical protein BACCAC_01416 [Bacteroides caccae ATCC 43185]
gi|149130259|gb|EDM21469.1| TIGR00730 family protein [Bacteroides caccae ATCC 43185]
Length = 199
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 15/120 (12%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
++LV++ RK + D + AV+ALPGG GTL+E+ EI+ QL G L
Sbjct: 86 TELVEVESMHERKQKMADLS--------DAVIALPGGCGTLEELLEIITWKQL---GLYL 134
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEA--LSYLAEFYDLS 129
P +++N + F+ LL+ L D + + +WK+ + EA L Y +D+S
Sbjct: 135 N-PIVILNVNGFFDPLLEMLEKAID-ENFMRRQHGDIWKVAQTPEEAVELLYSTPVWDIS 192
>gi|87198502|ref|YP_495759.1| hypothetical protein Saro_0477 [Novosphingobium aromaticivorans DSM
12444]
gi|87134183|gb|ABD24925.1| conserved hypothetical protein 730 [Novosphingobium aromaticivorans
DSM 12444]
Length = 292
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GT DE FE+L LIQ G P+P L+ D ++ ++++F E+ G +
Sbjct: 209 AVAVFPGGFGTFDEFFEMLTLIQ---TGKMKPIPILLFGKD-YWSRVVNFEALAEE-GVI 263
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+++ L+ ++ EA ++ +FYDL
Sbjct: 264 NFEDL-ELFTPVETADEAWKHIVDFYDL 290
>gi|313206822|ref|YP_004045999.1| hypothetical protein Riean_1336 [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|383486130|ref|YP_005395042.1| hypothetical protein RA0C_1612 [Riemerella anatipestifer ATCC 11845
= DSM 15868]
gi|386321195|ref|YP_006017357.1| Rossmann fold nucleotide-binding protein [Riemerella anatipestifer
RA-GD]
gi|416109402|ref|ZP_11591361.1| hypothetical protein RAYM_00735 [Riemerella anatipestifer RA-YM]
gi|442313962|ref|YP_007355265.1| putative Rossmann fold nucleotide-binding protein [Riemerella
anatipestifer RA-CH-2]
gi|312446138|gb|ADQ82493.1| Conserved hypothetical protein CHP00730 [Riemerella anatipestifer
ATCC 11845 = DSM 15868]
gi|315023895|gb|EFT36897.1| hypothetical protein RAYM_00735 [Riemerella anatipestifer RA-YM]
gi|325335738|gb|ADZ12012.1| Predicted Rossmann fold nucleotide-binding protein [Riemerella
anatipestifer RA-GD]
gi|380460815|gb|AFD56499.1| hypothetical protein RA0C_1612 [Riemerella anatipestifer ATCC 11845
= DSM 15868]
gi|441482885|gb|AGC39571.1| putative Rossmann fold nucleotide-binding protein [Riemerella
anatipestifer RA-CH-2]
Length = 243
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
+ +PGG GTLDE+ E L LIQ +IG P+ V+ F+ LLD+ D +
Sbjct: 153 GFIVMPGGFGTLDELSEALTLIQTRKIG-RFPI---VLVGSKFWSGLLDWFKDTLLENKL 208
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSI 131
E +L+++ D+ EA++++ FY+ +I
Sbjct: 209 ISPEDLNLFRMVDTAEEAVAHIKAFYEKYAI 239
>gi|390443913|ref|ZP_10231698.1| hypothetical protein A3SI_07654 [Nitritalea halalkaliphila LW7]
gi|389665686|gb|EIM77150.1| hypothetical protein A3SI_07654 [Nitritalea halalkaliphila LW7]
Length = 244
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 15/116 (12%)
Query: 13 QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELP 72
++++ +F RK A V LPGG GTLDE+FE L LIQ +IG P
Sbjct: 133 KIINFDYFFVRKVMFTKYA--------QGFVVLPGGFGTLDELFEALTLIQTNKIG-RFP 183
Query: 73 VPFLVMNYDSFYKKLLDFLGDC--EDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+ V+ ++++ LLD+L E G +++ ++ L+ + D ++A+ + EFY
Sbjct: 184 I---VLVGKAYWEGLLDWLKATMLEQHGYISEGDL-DLFSVVDEPTDAVKVIDEFY 235
>gi|440747419|ref|ZP_20926678.1| hypothetical protein C943_3507 [Mariniradius saccharolyticus AK6]
gi|436484339|gb|ELP40343.1| hypothetical protein C943_3507 [Mariniradius saccharolyticus AK6]
Length = 251
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V +PGG GTLDE FE L LIQ ++ P+ V+ F++ L D++ ++GT+
Sbjct: 149 AFVVMPGGFGTLDEFFEALTLIQ-TKVMRRFPI---VLMCSDFHEHLYDYIRHMAEYGTI 204
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVHEVN 139
K ++ L+ + DS E +++ ++ KR HE+
Sbjct: 205 NKSDL-DLFLLTDSVEEMETHIKKYAIEGYGLKRRHELR 242
>gi|33596489|ref|NP_884132.1| hypothetical protein BPP1868 [Bordetella parapertussis 12822]
gi|33566258|emb|CAE37169.1| putative exported protein [Bordetella parapertussis]
Length = 190
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 16/142 (11%)
Query: 4 PKVLCKQESQLVDLRF--FSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILAL 61
P E Q + L F F +RK A VA+PGG GTLDE+FE L L
Sbjct: 62 PHEAHNNEYQTISLSFEYFYSRKATFF--------MHSMAYVAMPGGFGTLDELFEALTL 113
Query: 62 IQLERIGSELPVPFLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALS 120
IQ ++ P P +++ + F+ L+D+LG+ G +A ++ +L+ I D ++ +
Sbjct: 114 IQTGKV---PPAPIVLVGSE-FWHGLVDWLGEQLLANGMIAAHDL-NLFIIEDDPAKVVR 168
Query: 121 YLAEFYDLSSIDKRVHEVNLKS 142
+ EF+D H +L +
Sbjct: 169 KVVEFHDKQGRTDSQHAPSLPA 190
>gi|423220634|ref|ZP_17207129.1| TIGR00730 family protein [Bacteroides caccae CL03T12C61]
gi|392623711|gb|EIY17814.1| TIGR00730 family protein [Bacteroides caccae CL03T12C61]
Length = 195
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 15/120 (12%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
++LV++ RK + D + AV+ALPGG GTL+E+ EI+ QL G L
Sbjct: 82 TELVEVESMHERKQKMADLS--------DAVIALPGGCGTLEELLEIITWKQL---GLYL 130
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEA--LSYLAEFYDLS 129
P +++N + F+ LL+ L D + + +WK+ + EA L Y +D+S
Sbjct: 131 N-PIVILNVNGFFDPLLEMLEKAID-ENFMRRQHGDIWKVAQTPEEAVELLYSTPVWDIS 188
>gi|82701701|ref|YP_411267.1| hypothetical protein Nmul_A0567 [Nitrosospira multiformis ATCC
25196]
gi|82409766|gb|ABB73875.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
25196]
Length = 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R F ARK+ + A TA V LPGG GTLDE+ E L L+Q G +P +
Sbjct: 127 FRHFFARKYMFVKLA--------TAYVVLPGGFGTLDELMEALTLVQ---TGKTRRMPII 175
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVH 136
++ D F++ +L++L + + E L ++ D +E + + ++Y+ + V
Sbjct: 176 LVRSD-FWRGMLEWLQNVLVAEGMIAPEDMDLIQVIDEPAEVVDAIFKYYETRGFEPSVA 234
Query: 137 EVNLK 141
E ++
Sbjct: 235 EREIQ 239
>gi|77164080|ref|YP_342605.1| hypothetical protein Noc_0555 [Nitrosococcus oceani ATCC 19707]
gi|254435327|ref|ZP_05048834.1| conserved hypothetical protein TIGR00730 [Nitrosococcus oceani
AFC27]
gi|76882394|gb|ABA57075.1| Conserved hypothetical protein 730 [Nitrosococcus oceani ATCC
19707]
gi|207088438|gb|EDZ65710.1| conserved hypothetical protein TIGR00730 [Nitrosococcus oceani
AFC27]
Length = 241
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R F +RK + A +A V LPGG GTLDE+ EIL L+Q G +P
Sbjct: 124 VNFRHFFSRKVMFVKYA--------SAYVVLPGGFGTLDELAEILTLVQ---TGKSRRIP 172
Query: 75 FLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
+++ SF+ L+D+ + + G + + ++ L+KI D E + + FY+ S +
Sbjct: 173 IILVQ-SSFWAGLIDWFKEYLVEEGMIDRHDL-DLFKILDKPQEVVDAIFSFYESRSFEP 230
Query: 134 RVHE 137
E
Sbjct: 231 SAEE 234
>gi|83952611|ref|ZP_00961341.1| decarboxylase family protein [Roseovarius nubinhibens ISM]
gi|83835746|gb|EAP75045.1| decarboxylase family protein [Roseovarius nubinhibens ISM]
Length = 274
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE+FE L LIQ R+ PVPFL+ + F++ ++++ E GT+
Sbjct: 190 AICVFPGGFGTLDELFEALTLIQTARM---TPVPFLLFG-EKFWRSIINWEALSEA-GTI 244
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
+ +++ L++ ++ EA+ + +Y+
Sbjct: 245 SAEDL-ELFRFVETADEAVGIIDGWYN 270
>gi|393723653|ref|ZP_10343580.1| hypothetical protein SPAM2_08378 [Sphingomonas sp. PAMC 26605]
Length = 307
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ A PGG GT DE+FE+L LIQ +I P+P L+ F++++++F E+
Sbjct: 224 ALAAFPGGFGTFDELFELLTLIQTGKIA---PIPVLLYG-RKFWERVVNFEALVEEGVVS 279
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
AKD ++ ++ E + + EFY
Sbjct: 280 AKD--LGIFTFVETAEEGWAVVKEFY 303
>gi|409435834|ref|ZP_11263042.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
gi|408752592|emb|CCM74189.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
Length = 288
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 15/125 (12%)
Query: 3 SPKVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALI 62
+P V E + +F+ RK + A A+ PGG GTLDE FE L LI
Sbjct: 176 APNVYVTPELSF-NFHYFAIRKMHFMVRA--------KAIAVFPGGFGTLDEFFECLTLI 226
Query: 63 QLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
Q R+ ++P L++ + F++ +++F E +GT+A D+V L D+ A +
Sbjct: 227 QTGRM-EKMP---LILFGEKFWRSIVNFEALAE-FGTIAPDDV-DLISFVDTADAAWKII 280
Query: 123 AEFYD 127
+FY+
Sbjct: 281 QDFYE 285
>gi|297621964|ref|YP_003710101.1| hypothetical protein wcw_1754 [Waddlia chondrophila WSU 86-1044]
gi|297377265|gb|ADI39095.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044]
gi|337294222|emb|CCB92206.1| putative uncharacterized protein [Waddlia chondrophila 2032/99]
Length = 341
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 66/128 (51%), Gaps = 11/128 (8%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+ +L+ R+F RK + + A+ PGG GTLDE+FE+L LIQ R G+
Sbjct: 153 DPKLIHFRYFFTRKLMFMSHS--------DALAVFPGGYGTLDELFEMLTLIQTGR-GNI 203
Query: 71 LPVPFLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
+P+ + +++K LD++ + + G + +++ SL+ + + E + ++ FY +
Sbjct: 204 IPIVLMEGPEGNYWKHWLDYVEKNLYEDGKICPEDM-SLFYLAPTVEEGVQHITHFYRVY 262
Query: 130 SIDKRVHE 137
+ + E
Sbjct: 263 HSSRYIRE 270
>gi|145596263|ref|YP_001160560.1| hypothetical protein Strop_3751 [Salinispora tropica CNB-440]
gi|145305600|gb|ABP56182.1| conserved hypothetical protein 730 [Salinispora tropica CNB-440]
Length = 283
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D R+F ARK + A A V LPGG GT+DE+FE L L+Q ++ P
Sbjct: 152 IDFRYFFARKTMFVKYA--------QAFVVLPGGFGTMDELFESLTLVQTGKV---TRFP 200
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
++M D +++ LLD+L D
Sbjct: 201 VVLMGSD-YWRGLLDWLRDT 219
>gi|83310308|ref|YP_420572.1| Rossmann fold nucleotide-binding protein [Magnetospirillum
magneticum AMB-1]
gi|82945149|dbj|BAE50013.1| Predicted Rossmann fold nucleotide-binding protein
[Magnetospirillum magneticum AMB-1]
Length = 314
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDE+FE LIQ +I P+P L+ + +++++++ + G V
Sbjct: 231 ALVVFPGGFGTLDELFEAATLIQTGKIE---PIPILLFGRE-YWERVINIDAMINE-GMV 285
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
A ++ S++ ++ EA +Y+A+FY L
Sbjct: 286 APED-KSIFTFVETAEEAWNYIADFYRL 312
>gi|326800490|ref|YP_004318309.1| hypothetical protein [Sphingobacterium sp. 21]
gi|326551254|gb|ADZ79639.1| Conserved hypothetical protein CHP00730 [Sphingobacterium sp. 21]
Length = 235
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 16/117 (13%)
Query: 13 QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELP 72
+L++ +F RK + + + LPGG GT+DE+FE + LIQ +I + P
Sbjct: 125 KLLEFNYFFVRKVMFMKYS--------QGYIVLPGGFGTMDELFEAITLIQTGKI-ARFP 175
Query: 73 VPFLVMNYDSFYKKLLDFLGD--CEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+ V+ S+Y L +++ D E+ A+D +L+++ D+ EA ++ +FYD
Sbjct: 176 I---VLVGKSYYGGLFNWIKDRMLEEGKISAED--LNLYRLVDTAEEAAGHIFKFYD 227
>gi|443478292|ref|ZP_21068063.1| hypothetical protein Pse7429DRAFT_3718 [Pseudanabaena biceps PCC
7429]
gi|443016436|gb|ELS31097.1| hypothetical protein Pse7429DRAFT_3718 [Pseudanabaena biceps PCC
7429]
Length = 404
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 13/121 (10%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGS 69
++++LV R+F RK + + A+ PGG GT DE FE L L Q G
Sbjct: 198 EDARLVRFRYFFTRKLYFVK--------ESDAIAIFPGGFGTQDEFFECLTLCQ---TGR 246
Query: 70 ELPVPFLVMNYDS--FYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+P P ++++ + ++++ F+ D + +E SL+KI + EA ++A FY
Sbjct: 247 TMPRPIVLLDKEGGDYWQQWHIFVQDQLIERGLIANEDCSLYKITNDVDEACQFIASFYS 306
Query: 128 L 128
+
Sbjct: 307 V 307
>gi|95929947|ref|ZP_01312687.1| conserved hypothetical protein 730 [Desulfuromonas acetoxidans DSM
684]
gi|95133916|gb|EAT15575.1| conserved hypothetical protein 730 [Desulfuromonas acetoxidans DSM
684]
Length = 342
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 7 LCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLER 66
+ KQ +++ ++F RK + A AV PGG GTLDE E L L+Q
Sbjct: 146 VMKQSDRVLMYKYFFNRKVAFLKEA--------DAVALFPGGFGTLDEAMETLTLVQ--- 194
Query: 67 IGSELPVPFLVM--NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
G P+P +++ N ++++ L +F+ D + E L+ I S EA+ +
Sbjct: 195 TGKNPPIPLVLIDDNNGTYWEDLFEFMRDVLLPKGLISGEDFGLFTITRSAEEAMEVIDS 254
Query: 125 FY 126
FY
Sbjct: 255 FY 256
>gi|350553873|ref|ZP_08923028.1| Conserved hypothetical protein CHP00730 [Thiorhodospira sibirica
ATCC 700588]
gi|349789583|gb|EGZ43530.1| Conserved hypothetical protein CHP00730 [Thiorhodospira sibirica
ATCC 700588]
Length = 241
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 15/129 (11%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGS 69
Q+ LV FFS RK + A +A V LPGG GTLDE+ EIL L+Q + G
Sbjct: 120 QDVSLVFHHFFS-RKVMFVKYA--------SAYVVLPGGFGTLDELAEILTLVQTGK-GR 169
Query: 70 ELPVPFLVMNYDSFYKKLLD-FLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
+P+ ++ + F++ LL+ F G ++ +++A L+ + DS EA+ + +Y+
Sbjct: 170 AIPI---ILVHSPFWQGLLEWFEAVLVKEGMISAEDLA-LYSVVDSAQEAVDAIFNYYEA 225
Query: 129 SSIDKRVHE 137
+ E
Sbjct: 226 RGFEPTAEE 234
>gi|257068303|ref|YP_003154558.1| hypothetical protein Bfae_11220 [Brachybacterium faecium DSM 4810]
gi|256559121|gb|ACU84968.1| conserved hypothetical protein, DprA/Smf-related, family 2
[Brachybacterium faecium DSM 4810]
Length = 266
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
VD R+F ARK + + + V +PGG+GT DE+FE L L+Q +I PV
Sbjct: 144 VDFRYFFARKTMFVKYS--------SGFVVMPGGLGTFDELFEALCLMQTHKI-DLFPV- 193
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
V+ +++ LLD+L G +A L ++ D+ EAL L E+
Sbjct: 194 --VLVGREYWQGLLDWLRTAVVDGGMANPLDIDLMRVVDTAEEALEVLREY 242
>gi|148553795|ref|YP_001261377.1| hypothetical protein Swit_0872 [Sphingomonas wittichii RW1]
gi|148498985|gb|ABQ67239.1| conserved hypothetical protein 730 [Sphingomonas wittichii RW1]
Length = 302
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV A PGG GT DE+FE+L L+Q ++ +P + D F++++LDF E+ G +
Sbjct: 204 AVAAFPGGFGTFDELFELLTLVQTGKMAQ---LPIFLFGQD-FWRRVLDFDALVEE-GVI 258
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVHEVNLKSTHG 145
++++ +L++ ++ EA L +Y R + + ++ G
Sbjct: 259 GENDL-NLFRFVETAEEAWEKLNLYYATRERSYRHRDPSTQAAAG 302
>gi|418296806|ref|ZP_12908649.1| hypothetical protein ATCR1_04774 [Agrobacterium tumefaciens
CCNWGS0286]
gi|355538981|gb|EHH08223.1| hypothetical protein ATCR1_04774 [Agrobacterium tumefaciens
CCNWGS0286]
Length = 298
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 14/86 (16%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AVV PGG GTLDE+FE L LIQ +R+ P+P L++ + F++ +++F D+GT+
Sbjct: 217 AVVIFPGGFGTLDELFEALTLIQTKRME---PIP-LILFGEKFWRSVINF-EFLADFGTI 271
Query: 101 AKDEVASL---------WKICDSNSE 117
A +++ L W+I ++ E
Sbjct: 272 APEDMNLLHFAETADDAWRIISAHYE 297
>gi|160893796|ref|ZP_02074580.1| hypothetical protein CLOL250_01350 [Clostridium sp. L2-50]
gi|156864781|gb|EDO58212.1| TIGR00730 family protein [Clostridium sp. L2-50]
Length = 188
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 38 DRT-AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCED 96
DR+ A + +PGG+GT +E FE+L L QL R G + +V N D F+ L + +C +
Sbjct: 95 DRSDAFIMVPGGIGTFEEFFEVLTLKQLGRHGKAI----IVYNKDGFFDSLFQMMDECVE 150
Query: 97 WGTVAKDEVASLWKICDSNSEALSYL 122
G + ++++ E LSYL
Sbjct: 151 KGFM-NHVTNEIYQVMTDTDEILSYL 175
>gi|284036829|ref|YP_003386759.1| hypothetical protein Slin_1915 [Spirosoma linguale DSM 74]
gi|283816122|gb|ADB37960.1| conserved hypothetical protein [Spirosoma linguale DSM 74]
Length = 266
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 17/116 (14%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ FF RK + A V +PGG+GTLDE+FE L LIQ +I + P+
Sbjct: 157 INFDFFFVRKVMFVKYA--------QGFVVMPGGMGTLDELFEALTLIQTRKI-ARFPI- 206
Query: 75 FLVMNYDSFYKKLLDFLGDC---EDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
V+ ++++ L+D++ D E +D L I D+ +EA+ + EFY+
Sbjct: 207 --VLVGRTYWQGLIDWITDVMLGEQQNINPED--MKLISIVDTPTEAVKVIDEFYN 258
>gi|421588136|ref|ZP_16033456.1| hypothetical protein RCCGEPOP_05626 [Rhizobium sp. Pop5]
gi|403707218|gb|EJZ22270.1| hypothetical protein RCCGEPOP_05626 [Rhizobium sp. Pop5]
Length = 288
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 3 SPKVLCKQESQLVDLRFFSARK-HGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILAL 61
+P V E + +F+ RK H ++ A+ PGG GTLDE FE L L
Sbjct: 176 APNVYVTPELSF-NFHYFAIRKMHFMVRA---------KAIAVFPGGFGTLDEFFECLTL 225
Query: 62 IQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSY 121
IQ R+ LP L++ ++F++ +++F E +GT+A D+V L ++ A
Sbjct: 226 IQTGRM-ERLP---LILFGEAFWRSIINFEALAE-FGTIAPDDV-KLISFVETAEAAWKI 279
Query: 122 LAEFYD 127
+ +FY+
Sbjct: 280 VQDFYE 285
>gi|167627685|ref|YP_001678185.1| hypothetical protein Fphi_1459 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597686|gb|ABZ87684.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 237
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 29/127 (22%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
R+F RK I ++ + + +PGG GTLDE+F+I LIQ G ++ +P ++
Sbjct: 127 RYFFTRKAMFIKHSM--------SYIVMPGGFGTLDELFDITTLIQ---TGKKVKMPIIL 175
Query: 78 MNYDSFYKKLLDFLGDCEDW--------GTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
Y K DF G +W G V+K+EV +L + DS E L +AE Y ++
Sbjct: 176 ------YGK--DFWGGLMEWIKTTLVQKGVVSKEEV-NLLTLVDSIDEVLEIVAEHY-MN 225
Query: 130 SIDKRVH 136
+ + H
Sbjct: 226 TYSSKAH 232
>gi|384172748|ref|YP_005554125.1| hypothetical protein [Arcobacter sp. L]
gi|345472358|dbj|BAK73808.1| conserved hypothetical protein [Arcobacter sp. L]
Length = 187
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A + LPGG GT +E+FE+L+ Q+ + P F N + +Y KL+DFL +C G +
Sbjct: 99 AFITLPGGYGTFEEIFEVLSSTQIGY--HKKPCAFY--NINGYYDKLIDFLNNCVKEGFI 154
Query: 101 AKDEVASL 108
KD V L
Sbjct: 155 KKDYVDML 162
>gi|317478175|ref|ZP_07937344.1| hypothetical protein HMPREF1007_00460 [Bacteroides sp. 4_1_36]
gi|316905658|gb|EFV27443.1| hypothetical protein HMPREF1007_00460 [Bacteroides sp. 4_1_36]
Length = 196
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
+QLV++ RK + D + AV+ALPGG GTL+E+ EI+ QL G L
Sbjct: 83 TQLVEVESMHQRKKTMADLS--------DAVIALPGGCGTLEELLEIITWKQL---GLYL 131
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEA--LSYLAEFYDLS 129
P +++N +++ LLD L D + + ++W + + EA L Y +D S
Sbjct: 132 N-PIVILNVKNYFDPLLDMLRQAVD-ENFMRVQHGAIWHVAQTPQEAVELIYTTPLWDAS 189
>gi|399155111|ref|ZP_10755178.1| hypothetical protein gproSAA_04747 [gamma proteobacterium SCGC
AAA007-O20]
Length = 200
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 13/112 (11%)
Query: 13 QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELP 72
+++ +F +RK L+ A +A V PGG GT DE+ E+L L+Q +++ P
Sbjct: 98 EVITFEYFFSRKVMLVKNA--------SACVCFPGGYGTADELMEVLTLLQTQKMK---P 146
Query: 73 VPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
+P L++ SF+K LL + D G V ++ + L K+ D+ E +S + E
Sbjct: 147 IP-LILYGSSFWKPLLLWFETLVDKGYVNREHL-ELIKVVDTIDETVSIVKE 196
>gi|383765522|ref|YP_005444503.1| hypothetical protein PSMK_04470 [Phycisphaera mikurensis NBRC
102666]
gi|381385790|dbj|BAM02606.1| hypothetical protein PSMK_04470 [Phycisphaera mikurensis NBRC
102666]
Length = 245
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 15/125 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D R+F RK + A + PGG GTLDE+FE L LIQ +I P P
Sbjct: 118 LDFRYFFVRKVMFVKYA--------CGFIIFPGGFGTLDELFESLTLIQTMKI---RPFP 166
Query: 75 FLVMNYDSFYKKLLDFLGDC--EDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSID 132
+ + +D F+ LLD++ + E + T++ ++ L + D EA++ + +D
Sbjct: 167 VVCVGHD-FWDGLLDWIRETLDEKYRTISHADL-DLIHVTDDLDEAVAQIQGCFDPGEYA 224
Query: 133 KRVHE 137
KRV E
Sbjct: 225 KRVAE 229
>gi|399044430|ref|ZP_10738078.1| putative Rossmann fold nucleotide-binding protein [Rhizobium sp.
CF122]
gi|398057209|gb|EJL49183.1| putative Rossmann fold nucleotide-binding protein [Rhizobium sp.
CF122]
Length = 288
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 15/125 (12%)
Query: 3 SPKVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALI 62
+P V E + +F+ RK + A A+ PGG GTLDE FE L LI
Sbjct: 176 APNVYVTPELSF-NFHYFAIRKMHFMVRA--------KAIAVFPGGFGTLDEFFECLTLI 226
Query: 63 QLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
Q R+ ++P L++ + F++ +++F E +GT+A D+V L D+ A +
Sbjct: 227 QTGRM-EKMP---LILFGEKFWRSIVNFEALAE-FGTIAPDDV-DLISFVDTADAAWKII 280
Query: 123 AEFYD 127
+FY+
Sbjct: 281 EDFYE 285
>gi|332882496|ref|ZP_08450114.1| TIGR00730 family protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332679556|gb|EGJ52535.1| TIGR00730 family protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 228
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 15/115 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ +F ARK + + A VA+PGG GTLDE+FE L L+Q +I +P
Sbjct: 118 IKFNYFFARKVMFVKYS--------KAFVAMPGGFGTLDELFETLTLVQTRKIDQ---IP 166
Query: 75 FLVMNYDSFYKKLLDFLGDC--EDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+++ D +++ LL+++ E + + +++ +L + D+ E + + EFY+
Sbjct: 167 IILVGTD-YWRGLLEWIKTVLLEKFSNINAEDM-NLVHLVDTEDEVIRVIEEFYN 219
>gi|317969659|ref|ZP_07971049.1| hypothetical protein SCB02_08990 [Synechococcus sp. CB0205]
Length = 337
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 10/85 (11%)
Query: 40 TAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDF--LGDCEDW 97
A V PGG GTLDE+FE+L L Q I ++PV ++ F+++L+DF L DC
Sbjct: 242 AAAVLFPGGFGTLDELFEVLTLRQTA-IKGQMPV---ILFGTEFWQRLIDFDYLADC--- 294
Query: 98 GTVAKDEVASLWKICDSNSEALSYL 122
+ ++E L + DS EA S++
Sbjct: 295 -GLIREEHLELVRFTDSAQEAWSWI 318
>gi|393785939|ref|ZP_10374083.1| TIGR00730 family protein [Bacteroides nordii CL02T12C05]
gi|392661053|gb|EIY54650.1| TIGR00730 family protein [Bacteroides nordii CL02T12C05]
Length = 195
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 21/134 (15%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
PK + +Q S+LV++ RK + D + AV+ALPGG GTL+E+ E
Sbjct: 68 PKFMVEQGWHHTGLSKLVEVESMHERKQLMADLS--------DAVIALPGGCGTLEELLE 119
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
I+ QL G L P +++N + F+ LLD L D + + +W + + E
Sbjct: 120 IITWKQL---GLYLN-PIVILNTNGFFDPLLDMLTRAID-ENFMRRQHGEIWHVATTPEE 174
Query: 118 A--LSYLAEFYDLS 129
A L Y +D S
Sbjct: 175 AVELIYTVPVWDAS 188
>gi|90419792|ref|ZP_01227701.1| possible lysine decarboxylase [Aurantimonas manganoxydans SI85-9A1]
gi|90335833|gb|EAS49581.1| possible lysine decarboxylase [Aurantimonas manganoxydans SI85-9A1]
Length = 300
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GT+DE+FE L LIQ R+ +P L+ +SF+++++D E+ GT+
Sbjct: 219 AMAIFPGGFGTMDELFEALTLIQTRRMQR---IPVLLFG-ESFWRRVIDLEALAEE-GTI 273
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
A +++ L D+ + + + +FYD
Sbjct: 274 APEDL-DLVTYVDTAEDGWAAIRKFYDF 300
>gi|404494345|ref|YP_006718451.1| Rossmann fold nucleotide-binding protein [Pelobacter carbinolicus
DSM 2380]
gi|77546348|gb|ABA89910.1| Rossmann fold nucleotide-binding protein [Pelobacter carbinolicus
DSM 2380]
Length = 342
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 13/122 (10%)
Query: 7 LCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLER 66
+ Q ++ ++F RK + A AV PGG GTLDE E L LIQ
Sbjct: 146 VMSQSPNVITYKYFFNRKVAFLKEAA--------AVALFPGGFGTLDEAMETLTLIQ--- 194
Query: 67 IGSELPVPFLVMNYDS--FYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
G P+P ++++ D +++++L F+ D + E SL+ I +EA++ +
Sbjct: 195 TGKNPPIPLVLIDDDQGDYWERVLAFMKDPLLKRDLISGEDFSLFSITRDPAEAVAIIDA 254
Query: 125 FY 126
FY
Sbjct: 255 FY 256
>gi|399023606|ref|ZP_10725663.1| TIGR00730 family protein [Chryseobacterium sp. CF314]
gi|398082519|gb|EJL73267.1| TIGR00730 family protein [Chryseobacterium sp. CF314]
Length = 250
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
+ +PGG GTLDE+ E + LIQ +IG + P+ V+ F+ LLD F G
Sbjct: 160 GFIVMPGGFGTLDELTEAITLIQTNKIG-KFPI---VLVGSEFWGGLLDWFKTTLLKEGM 215
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYDLSSID 132
+A+ ++ L+++ D+ EA++++ FYD S++
Sbjct: 216 IAEHDL-DLYRVVDTADEAVAHIKAFYDKYSVN 247
>gi|408680504|ref|YP_006880331.1| hypothetical protein SVEN_4786 [Streptomyces venezuelae ATCC 10712]
gi|328884833|emb|CCA58072.1| hypothetical protein SVEN_4786 [Streptomyces venezuelae ATCC 10712]
Length = 249
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 12/110 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A V LPGG+GTLDE+FE L L+Q ++ + P+
Sbjct: 148 VNFRYFFVRKTMFVKYA--------QGFVVLPGGLGTLDELFEALTLVQTRKV-TRFPI- 197
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
V+ ++K L+D+L D G A + L+ + D EA++ + +
Sbjct: 198 --VLFGTQYWKGLVDWLRDSVVAGGKASERDLLLFHVTDDVDEAVALVTK 245
>gi|189460195|ref|ZP_03008980.1| hypothetical protein BACCOP_00832 [Bacteroides coprocola DSM 17136]
gi|189433056|gb|EDV02041.1| TIGR00730 family protein [Bacteroides coprocola DSM 17136]
Length = 195
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 13/111 (11%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
+QL++ RK + D + V+ALPGG GTL+E+ EI+ QL G L
Sbjct: 82 TQLIETETMHERKQIMADMS--------DGVIALPGGCGTLEELLEIITWKQL---GLYL 130
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
P +++N + FY LL+ L + + E ++W + ++ EA++ L
Sbjct: 131 K-PVVILNINHFYDPLLEMLNQAIE-QNFMRREHGAIWHVAETPEEAVNLL 179
>gi|326381457|ref|ZP_08203151.1| hypothetical protein SCNU_00860 [Gordonia neofelifaecis NRRL
B-59395]
gi|326199704|gb|EGD56884.1| hypothetical protein SCNU_00860 [Gordonia neofelifaecis NRRL
B-59395]
Length = 275
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 14/109 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A A V LPGG GTLDE+FE L L+Q +++ L P
Sbjct: 174 MNFRYFFVRKTMFVKYA--------QAFVCLPGGFGTLDELFEALTLVQTKKV---LRFP 222
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
+++ + F+ L+D+L G E G V+ +V L ++ D+ +EA+ +
Sbjct: 223 IVLIGAE-FWGPLVDWLRGTLEAEGKVSPGDV-DLLQVVDTPAEAVEII 269
>gi|238060938|ref|ZP_04605647.1| hypothetical protein MCAG_01904 [Micromonospora sp. ATCC 39149]
gi|237882749|gb|EEP71577.1| hypothetical protein MCAG_01904 [Micromonospora sp. ATCC 39149]
Length = 283
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D R+F ARK + A A V LPGG GT+DE+FE L L+Q ++ + PV
Sbjct: 152 IDFRYFFARKTMFVKYA--------QAFVVLPGGFGTMDELFEALTLVQTGKV-TRFPVV 202
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
+ Y ++ LLD+L D
Sbjct: 203 LMGTEY---WRGLLDWLRDT 219
>gi|400756281|ref|YP_006564649.1| hypothetical protein PGA2_c34460 [Phaeobacter gallaeciensis 2.10]
gi|398655434|gb|AFO89404.1| hypothetical protein PGA2_c34460 [Phaeobacter gallaeciensis 2.10]
Length = 282
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDEMFE L LIQ R+ VPFL+ +F++K++++ D GT+
Sbjct: 190 AITVFPGGFGTLDEMFETLTLIQTGRMER---VPFLLFGR-AFWEKIINWEA-LADAGTI 244
Query: 101 AKDEVASLWKICDSNSEALSYL 122
+++++ L++ ++ EA+ +
Sbjct: 245 SEEDL-DLFRFVETAEEAIHII 265
>gi|94971110|ref|YP_593158.1| hypothetical protein Acid345_4084 [Candidatus Koribacter versatilis
Ellin345]
gi|94553160|gb|ABF43084.1| conserved hypothetical protein 730 [Candidatus Koribacter
versatilis Ellin345]
Length = 275
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 13/107 (12%)
Query: 13 QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELP 72
Q ++ +F RK C V+ SC A + LPGG GTLDE+FE LIQ +IG P
Sbjct: 163 QTIEFHYFFVRK----VCLVKY-SC---AFICLPGGFGTLDELFEAATLIQCGKIG---P 211
Query: 73 VPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEAL 119
P +++ + F+ + DF G + ++ +I DS EA+
Sbjct: 212 FPLILIG-EEFWSGVRDFTAHLLGEGAIGMEDTG-FARITDSPKEAV 256
>gi|395491785|ref|ZP_10423364.1| hypothetical protein SPAM26_08132 [Sphingomonas sp. PAMC 26617]
Length = 323
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ A PGG GT DE+FE+L LIQ +I P+P L+ + F+ ++++F E+
Sbjct: 240 ALAAFPGGFGTFDELFELLTLIQTGKIA---PIPVLLYGRE-FWNRVVNFDALVEEGVVS 295
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
AKD S++ ++ E + +FY
Sbjct: 296 AKD--LSIFTFVETAQEGWDVVQDFY 319
>gi|399994738|ref|YP_006574978.1| hypothetical protein PGA1_c36280 [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
gi|398659293|gb|AFO93259.1| hypothetical protein PGA1_c36280 [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
Length = 282
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDEMFE L LIQ R+ VPFL+ +F++K++++ D GT+
Sbjct: 190 AITVFPGGFGTLDEMFETLTLIQTGRMER---VPFLLFGR-AFWEKIINWEA-LADAGTI 244
Query: 101 AKDEVASLWKICDSNSEALSYL 122
+++++ L++ ++ EA+ +
Sbjct: 245 SEEDL-DLFRFVETAEEAIHVI 265
>gi|160871728|ref|ZP_02061860.1| decarboxylase family protein [Rickettsiella grylli]
gi|159120527|gb|EDP45865.1| decarboxylase family protein [Rickettsiella grylli]
Length = 291
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 16 DLRFFSARK-HGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+F+ RK H LI A+V PGG GTLDE+FE L L+Q ++I P+P
Sbjct: 192 QFHYFAIRKMHFLIRA---------RALVCFPGGYGTLDELFEALTLLQTKKIK---PIP 239
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
L+ ++ KL++F + G + +++ ++ ++ +A +A+FY+L+
Sbjct: 240 LLLFG-KKYWSKLINFNFLVSE-GMIDVNDL-KFFRYVETAEQAWKIIAQFYNLT 291
>gi|68074745|ref|XP_679289.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56499999|emb|CAI04289.1| conserved hypothetical protein [Plasmodium berghei]
Length = 347
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
+F RK L+ ++ A + +PGG GTLDE+ EIL L Q +R +P+
Sbjct: 236 FHYFFTRKFWLVYLSL--------AFIIMPGGFGTLDELMEILTLKQCKRFKRHVPI--- 284
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
++ F+ +L+F E +G ++KD+V SL+ I DS EA + F
Sbjct: 285 ILFGKEFWTSILNFDMLVE-YGLISKDDVDSLF-ITDSIEEAYECVINF 331
>gi|337755117|ref|YP_004647628.1| hypothetical protein F7308_1101 [Francisella sp. TX077308]
gi|336446722|gb|AEI36028.1| hypothetical protein F7308_1101 [Francisella sp. TX077308]
Length = 237
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 28/117 (23%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
R+F RK I ++ + + +PGG GTLDE+F+I LIQ G ++ +P ++
Sbjct: 127 RYFFTRKAMFIKHSM--------SYIVMPGGFGTLDELFDITTLIQ---TGKKVKMPIIL 175
Query: 78 MNYDSFYKKLLDFLGDCEDW--------GTVAKDEVASLWKICDSNSEALSYLAEFY 126
Y K DF G +W G V+K+EV +L + DS E L +AE Y
Sbjct: 176 ------YGK--DFWGGLMEWIKTTLVQKGVVSKEEV-NLLTLVDSIDEVLEVVAEHY 223
>gi|388569946|ref|ZP_10156325.1| hypothetical protein Q5W_4679 [Hydrogenophaga sp. PBC]
gi|388262852|gb|EIK88463.1| hypothetical protein Q5W_4679 [Hydrogenophaga sp. PBC]
Length = 296
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A++A PGG GTLDE+FE++ L+Q ++ PVP L+ D ++K+L++ E+ GT+
Sbjct: 212 ALLAFPGGFGTLDELFEVITLVQCKK---SKPVPILLYGSD-YWKRLINLEVLVEE-GTI 266
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ +++ L++ D A + +FY L
Sbjct: 267 SPEDL-QLFQYVDDPKVAWEAIVKFYQL 293
>gi|404254782|ref|ZP_10958750.1| hypothetical protein SPAM266_16221 [Sphingomonas sp. PAMC 26621]
Length = 323
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ A PGG GT DE+FE+L LIQ +I P+P L+ + F+ ++++F E+
Sbjct: 240 ALAAFPGGFGTFDELFELLTLIQTGKIA---PIPVLLYGRE-FWNRVVNFDALVEEGVVS 295
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
AKD S++ ++ E + +FY
Sbjct: 296 AKD--LSIFTFVETAQEGWDVVQDFY 319
>gi|303245483|ref|ZP_07331767.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
gi|302493332|gb|EFL53194.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
Length = 218
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 14/108 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
D R+F RK + A+ A +A+PGG GTLDE+ E L LIQ +RI P P
Sbjct: 118 DYRYFFVRKLMFVKYAM--------AYIAMPGGFGTLDEVSEALVLIQTKRIK---PFPI 166
Query: 76 LVMNYDSFYKKLLD-FLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
+ + +F+ L++ F G G ++K ++ L+ + D+ EA+ ++
Sbjct: 167 IFLG-SAFWSGLMEWFRGTLLSRGFISKGDL-DLFTVLDTPEEAVQFI 212
>gi|73540575|ref|YP_295095.1| hypothetical protein Reut_A0872 [Ralstonia eutropha JMP134]
gi|72117988|gb|AAZ60251.1| Conserved hypothetical protein 730 [Ralstonia eutropha JMP134]
Length = 239
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
A + +PGG GTLDE+ E+L L+Q G VP +VM F+K LLD F G
Sbjct: 140 AFIVMPGGFGTLDELAEVLTLVQ---TGKSRSVP-VVMFGSRFWKGLLDWFRFTLLPMGL 195
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 135
+A+ ++ L KI D E L + E+Y+ DK +
Sbjct: 196 IAEHDL-DLMKIVDEPHEVLEAVYEYYERRGGDKPI 230
>gi|319943200|ref|ZP_08017483.1| methionyl-tRNA formyltransferase [Lautropia mirabilis ATCC 51599]
gi|319743742|gb|EFV96146.1| methionyl-tRNA formyltransferase [Lautropia mirabilis ATCC 51599]
Length = 249
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 46 PGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC-EDWGTVAKDE 104
PGG GTLDE+ E+L LIQ R+G +PV ++ +F+K LLD++ D GTV+ +
Sbjct: 155 PGGWGTLDELMEVLTLIQ-TRVGRRIPV---ILVGSTFWKGLLDWMNDTLVAHGTVSAAD 210
Query: 105 VASLWKICDSNSEALSYLAEFY 126
+ L ++ D E ++ + +FY
Sbjct: 211 M-ELIRVIDDPDEVVNAIFDFY 231
>gi|149913270|ref|ZP_01901804.1| acetyl-CoA acetyltransferase [Roseobacter sp. AzwK-3b]
gi|149813676|gb|EDM73502.1| acetyl-CoA acetyltransferase [Roseobacter sp. AzwK-3b]
Length = 273
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDEMFE L LIQ +R+ VPFL+ + F+++++++ D GT+
Sbjct: 190 AICVFPGGFGTLDEMFEALTLIQTDRMTK---VPFLLFG-EEFWRRIINWEA-LADAGTI 244
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+ +++ L++ ++ +A+ + +Y
Sbjct: 245 SPEDL-DLFRFVETAKDAVEIIDAWY 269
>gi|33592381|ref|NP_880025.1| hypothetical protein BP1253 [Bordetella pertussis Tohama I]
gi|384203683|ref|YP_005589422.1| hypothetical protein BPTD_1243 [Bordetella pertussis CS]
gi|408415187|ref|YP_006625894.1| hypothetical protein BN118_1218 [Bordetella pertussis 18323]
gi|33572026|emb|CAE41549.1| putative exported protein [Bordetella pertussis Tohama I]
gi|332381797|gb|AEE66644.1| hypothetical protein BPTD_1243 [Bordetella pertussis CS]
gi|401777357|emb|CCJ62643.1| putative exported protein [Bordetella pertussis 18323]
Length = 209
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 16/127 (12%)
Query: 4 PKVLCKQESQLVDLRF--FSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILAL 61
P E Q + L F F +RK A VA+PGG GTLDE+FE L L
Sbjct: 81 PHEAHNNEYQTISLSFEYFYSRKATFF--------MHSMAYVAMPGGFGTLDELFEALTL 132
Query: 62 IQLERIGSELPVPFLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALS 120
IQ ++ P P +++ + F+ L+D+LG+ G +A ++ +L+ I D ++ +
Sbjct: 133 IQTGKV---PPAPIVLVGSE-FWHGLVDWLGEQLLANGMIAAHDL-NLFIIEDDPAKVVR 187
Query: 121 YLAEFYD 127
+ EF+D
Sbjct: 188 KVVEFHD 194
>gi|405377561|ref|ZP_11031502.1| putative Rossmann fold nucleotide-binding protein [Rhizobium sp.
CF142]
gi|397325998|gb|EJJ30322.1| putative Rossmann fold nucleotide-binding protein [Rhizobium sp.
CF142]
Length = 288
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GTLDE FE L LIQ R+ +P L+ F+ +++F E +GT+
Sbjct: 205 AVAVFPGGFGTLDEFFECLTLIQTGRMER---IPLLLFG-SKFWHSIINFEALAE-FGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
A ++V +L D+ EA + +FY+
Sbjct: 260 APEDV-NLISFVDTADEAWKIVQDFYE 285
>gi|407451329|ref|YP_006723053.1| Rossmann fold nucleotide-binding protein [Riemerella anatipestifer
RA-CH-1]
gi|403312313|gb|AFR35154.1| putative Rossmann fold nucleotide-binding protein [Riemerella
anatipestifer RA-CH-1]
Length = 242
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
+ +PGG GTLDE+ E L LIQ +IG P+ V+ F+ LLD+ + +
Sbjct: 152 GFIVMPGGFGTLDELSEALTLIQTHKIG-RFPI---VLVGSKFWSGLLDWFKNTLLENKL 207
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSI 131
E +L+++ D+ EA++++ FY+ +I
Sbjct: 208 ISPEDLNLFRVVDTAEEAVAHIKAFYEKYAI 238
>gi|443293948|ref|ZP_21033042.1| Conserved hypothetical protein [Micromonospora lupini str. Lupac
08]
gi|385882733|emb|CCH21193.1| Conserved hypothetical protein [Micromonospora lupini str. Lupac
08]
Length = 287
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D R+F ARK + A A V LPGG GT+DE+FE L L+Q ++ + PV
Sbjct: 152 IDFRYFFARKTMFVKYA--------QAFVVLPGGFGTMDELFEALTLVQTGKV-TRFPVV 202
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
+ + Y ++ LLD+L D
Sbjct: 203 LMGVAY---WQGLLDWLRDT 219
>gi|126738617|ref|ZP_01754322.1| decarboxylase family protein [Roseobacter sp. SK209-2-6]
gi|126720416|gb|EBA17122.1| decarboxylase family protein [Roseobacter sp. SK209-2-6]
Length = 281
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 16/111 (14%)
Query: 16 DLRFFSARK-HGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ +F+ RK H L+ A A+ PGG GTLDE+FE L LIQ R+ VP
Sbjct: 173 NFHYFAIRKMHFLMRAA---------AITVFPGGFGTLDELFETLTLIQTGRMER---VP 220
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
F++ + F++K++++ D GT+++ ++ L+K ++ EA + E+
Sbjct: 221 FILFGRE-FWEKIINWEA-LADAGTISEQDL-DLFKFVETAEEAAQIINEW 268
>gi|114330790|ref|YP_747012.1| hypothetical protein Neut_0777 [Nitrosomonas eutropha C91]
gi|114307804|gb|ABI59047.1| conserved hypothetical protein 730 [Nitrosomonas eutropha C91]
Length = 239
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R F ARK+ I A TA V +PGG GTLDE+ E L L+Q G +P +
Sbjct: 124 FRHFFARKYMFIKFA--------TAYVVMPGGFGTLDELMEALTLVQ---TGKTRKMPII 172
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVH 136
++ D F++ ++D+ E L +I D ++ + + +Y+ S +
Sbjct: 173 LVCSD-FWQGIIDWFRQVLVQDNFISPEDMDLIQIVDEPAQVVDAIFRYYETSGFEPSAT 231
Query: 137 EVNLK 141
E N++
Sbjct: 232 ERNIQ 236
>gi|386392428|ref|ZP_10077209.1| TIGR00730 family protein [Desulfovibrio sp. U5L]
gi|385733306|gb|EIG53504.1| TIGR00730 family protein [Desulfovibrio sp. U5L]
Length = 218
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 14/108 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ R+F RK + A+ A +A+PGG GTLDE+ E L LIQ RI P P
Sbjct: 118 EYRYFFIRKLMFVKYAM--------AYIAMPGGFGTLDEVSEALVLIQTRRIK---PFPI 166
Query: 76 LVMNYDSFYKKLLD-FLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
+ + +F+ L+D F G + G V+ D++ L + D+ EA++++
Sbjct: 167 VFLG-SAFWGGLIDWFKGTLLERGFVSPDDM-ELITVVDTAEEAVAFI 212
>gi|357632872|ref|ZP_09130750.1| Conserved hypothetical protein CHP00730 [Desulfovibrio sp. FW1012B]
gi|357581426|gb|EHJ46759.1| Conserved hypothetical protein CHP00730 [Desulfovibrio sp. FW1012B]
Length = 218
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 14/108 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ R+F RK + A+ A +A+PGG GTLDE+ E L LIQ RI P P
Sbjct: 118 EYRYFFIRKLMFVKYAM--------AYIAMPGGFGTLDEVSEALVLIQTRRIK---PFPI 166
Query: 76 LVMNYDSFYKKLLD-FLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
+ + +F+ L+D F G + G V+ D++ L + D+ EA++++
Sbjct: 167 VFLG-SAFWGGLIDWFKGTLLERGFVSPDDM-ELITVVDTAEEAVAFI 212
>gi|110632747|ref|YP_672955.1| hypothetical protein Meso_0386 [Chelativorans sp. BNC1]
gi|110283731|gb|ABG61790.1| conserved hypothetical protein 730 [Chelativorans sp. BNC1]
Length = 283
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKL-LDFLGDCEDWGT 99
A+ PGG GT+DE+FE L LIQ R+ VP ++ + + + + L FL + GT
Sbjct: 198 AIAVFPGGFGTMDELFEALTLIQTGRMER---VPVILFGQEFWEQAINLPFLAEQ---GT 251
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYDLS 129
++ + A L ++ EA ++A+FYDL+
Sbjct: 252 ISPGD-AELISYAETAEEAWGHIADFYDLA 280
>gi|33602216|ref|NP_889776.1| hypothetical protein BB3240 [Bordetella bronchiseptica RB50]
gi|410419700|ref|YP_006900149.1| hypothetical protein BN115_1911 [Bordetella bronchiseptica MO149]
gi|412338366|ref|YP_006967121.1| hypothetical protein BN112_1042 [Bordetella bronchiseptica 253]
gi|427814160|ref|ZP_18981224.1| putative exported protein [Bordetella bronchiseptica 1289]
gi|427821369|ref|ZP_18988432.1| putative exported protein [Bordetella bronchiseptica D445]
gi|427823440|ref|ZP_18990502.1| putative exported protein [Bordetella bronchiseptica Bbr77]
gi|33576654|emb|CAE33732.1| putative exported protein [Bordetella bronchiseptica RB50]
gi|408446995|emb|CCJ58667.1| putative exported protein [Bordetella bronchiseptica MO149]
gi|408768200|emb|CCJ52960.1| putative exported protein [Bordetella bronchiseptica 253]
gi|410565160|emb|CCN22712.1| putative exported protein [Bordetella bronchiseptica 1289]
gi|410572369|emb|CCN20644.1| putative exported protein [Bordetella bronchiseptica D445]
gi|410588705|emb|CCN03765.1| putative exported protein [Bordetella bronchiseptica Bbr77]
Length = 190
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 16/127 (12%)
Query: 4 PKVLCKQESQLVDLRF--FSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILAL 61
P E Q + L F F +RK A VA+PGG GTLDE+FE L L
Sbjct: 62 PHEAHNNEYQTISLSFEYFYSRKATFF--------MHSMAYVAMPGGFGTLDELFEALTL 113
Query: 62 IQLERIGSELPVPFLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALS 120
IQ ++ P P +++ + F+ L+D+LG+ G +A ++ +L+ I D ++ +
Sbjct: 114 IQTGKV---PPAPIVLVGSE-FWHGLVDWLGEQLLANGMIAAHDL-NLFIIEDDPAKVVR 168
Query: 121 YLAEFYD 127
+ EF+D
Sbjct: 169 KVVEFHD 175
>gi|323529802|ref|YP_004231954.1| hypothetical protein BC1001_5517 [Burkholderia sp. CCGE1001]
gi|323386804|gb|ADX58894.1| Conserved hypothetical protein CHP00730 [Burkholderia sp. CCGE1001]
Length = 335
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 62/108 (57%), Gaps = 14/108 (12%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I P+P +++
Sbjct: 212 YFAIRKLHLLERA--------QAAVFFPGGFGTCDELFEVLTLLQTSKI---RPLPVVLV 260
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+SF+++ +DF + G +A +++A L+ C++ E + +A ++
Sbjct: 261 G-ESFWRRAIDFDFLISE-GMIAPEDMA-LFSFCETAPEIWATVARWH 305
>gi|146302237|ref|YP_001196828.1| hypothetical protein Fjoh_4510 [Flavobacterium johnsoniae UW101]
gi|146156655|gb|ABQ07509.1| conserved hypothetical protein 730 [Flavobacterium johnsoniae
UW101]
Length = 242
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 7/88 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGD--CEDWG 98
V +PGG GTLDEMFE + LIQ ++IG P +++ + F+ L++++ E
Sbjct: 151 GFVVMPGGFGTLDEMFEAITLIQTKKIGK---FPIILVGVE-FWSGLIEWVKTVLVEKMH 206
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFY 126
TV+ +++ +L+KI D+ E + L +FY
Sbjct: 207 TVSSEDL-NLFKIVDTEDEVVDVLDKFY 233
>gi|407710635|ref|YP_006794499.1| decarboxylase family protein [Burkholderia phenoliruptrix BR3459a]
gi|407239318|gb|AFT89516.1| decarboxylase family protein [Burkholderia phenoliruptrix BR3459a]
Length = 335
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 62/108 (57%), Gaps = 14/108 (12%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I P+P +++
Sbjct: 212 YFAIRKLHLLERA--------QAAVFFPGGFGTCDELFEVLTLLQTSKI---RPLPVVLV 260
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+SF+++ +DF + G +A +++A L+ C++ E + +A ++
Sbjct: 261 G-ESFWRRAIDFDFLISE-GMIAPEDMA-LFSFCETAPEIWATVARWH 305
>gi|384208177|ref|YP_005593897.1| Rossmann fold nucleotide-binding protein [Brachyspira intermedia
PWS/A]
gi|343385827|gb|AEM21317.1| predicted Rossmann fold nucleotide-binding protein [Brachyspira
intermedia PWS/A]
Length = 221
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 18/80 (22%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQ---LERIGSEL 71
+ R+F ARK + A AV+ PGG GT+DEMFE L LIQ LER+
Sbjct: 117 LKFRYFFARKVMFLKYA--------KAVIIFPGGFGTMDEMFETLTLIQTKVLERM---- 164
Query: 72 PVPFLVMNYDSFYKKLLDFL 91
P +VMN S+Y L++++
Sbjct: 165 --PLIVMN-SSYYTDLIEWI 181
>gi|374301541|ref|YP_005053180.1| hypothetical protein [Desulfovibrio africanus str. Walvis Bay]
gi|332554477|gb|EGJ51521.1| Conserved hypothetical protein CHP00730 [Desulfovibrio africanus
str. Walvis Bay]
Length = 309
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 14/109 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+F+ RK L+ A +VA PGG GT+DE+FE L LIQ G P+P
Sbjct: 197 QFHYFAIRKMHLLMRA--------KGLVAFPGGFGTMDELFETLTLIQ---TGKVEPIPV 245
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
L+ + F+ K+++F E GT+A ++ L++ ++ EA + LA+
Sbjct: 246 LLFGRE-FWNKVINFEALVEA-GTIAARDL-KLFQYVETAEEAWTILAK 291
>gi|225022895|ref|ZP_03712087.1| hypothetical protein CORMATOL_02941 [Corynebacterium matruchotii
ATCC 33806]
gi|224944118|gb|EEG25327.1| hypothetical protein CORMATOL_02941 [Corynebacterium matruchotii
ATCC 33806]
Length = 254
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 14/109 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK + + A V LPGG GTLDE+FE+L ++Q ++ + P
Sbjct: 148 VNFRYFFARKTMFLKYS--------QAFVCLPGGFGTLDELFEVLCMVQTGKVTN---YP 196
Query: 75 FLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALSYL 122
++M D F++ L+ +L D G +A +++ L+ + DS EA++++
Sbjct: 197 IVLMGVD-FWQPLVQWLTDRLVAEGMIAANDL-ELFLLTDSVDEAVAHI 243
>gi|332529116|ref|ZP_08405080.1| hypothetical protein HGR_04378 [Hylemonella gracilis ATCC 19624]
gi|332041339|gb|EGI77701.1| hypothetical protein HGR_04378 [Hylemonella gracilis ATCC 19624]
Length = 294
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDE+FE++ L+Q G VP +V++ F+++L+DF E+ G +
Sbjct: 208 ALVVFPGGFGTLDELFEVMTLVQ---TGKSERVP-IVLHGREFWQRLIDFDLLIEE-GLI 262
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSS 130
+ +V L++I D+ A + +Y L +
Sbjct: 263 SPKDV-ELFRIVDTPEAAWEAIQGYYKLDT 291
>gi|255594307|ref|XP_002536064.1| conserved hypothetical protein [Ricinus communis]
gi|223521013|gb|EEF26320.1| conserved hypothetical protein [Ricinus communis]
Length = 412
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLL--DFLGDCEDWG 98
A+VA PGG GTLDE+FE L LIQ G VP L+ D F++KL+ D+L +
Sbjct: 162 ALVAFPGGYGTLDELFEALTLIQ---TGKARRVPVLLYGSD-FWRKLVNWDYLLEM---- 213
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFYDLSSID 132
T E L+ D+ +A + +FY L D
Sbjct: 214 TCINPEDLDLFHFVDTPQQAWRKIVDFYQLPDED 247
>gi|184200476|ref|YP_001854683.1| hypothetical protein KRH_08300 [Kocuria rhizophila DC2201]
gi|183580706|dbj|BAG29177.1| hypothetical protein [Kocuria rhizophila DC2201]
Length = 292
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + VALPGG GTLDE+FE L L+Q +I + PV
Sbjct: 157 INFRYFFARKTMFVKYS--------QGFVALPGGFGTLDELFEALTLVQTGKI-TRFPV- 206
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
++ ++ LLD++ G G VA+ ++ L ++ D+ E + LA +
Sbjct: 207 --ILVGTEYWGPLLDWITGTLVAGGKVAETDL-DLLRVVDTAEEVVEILASVH 256
>gi|385679150|ref|ZP_10053078.1| lysine decarboxylase [Amycolatopsis sp. ATCC 39116]
Length = 256
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK I A A + LPGG GTLDE+FE L L+Q +++ ++ PV
Sbjct: 150 VNFRYFFTRKTMFIKYA--------QAFICLPGGFGTLDELFEALTLVQTKKV-TKFPV- 199
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
V+ S++ L D++ D D+ +L + D EA++ + E Y
Sbjct: 200 --VLFGRSYWGGLYDWVRDSVHAQGKISDKDLALLHLTDDVDEAVAMVEEAY 249
>gi|336119948|ref|YP_004574726.1| hypothetical protein MLP_43090 [Microlunatus phosphovorus NM-1]
gi|334687738|dbj|BAK37323.1| hypothetical protein MLP_43090 [Microlunatus phosphovorus NM-1]
Length = 253
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + A V LPGG GT DE+FE L L+Q ++ S PV
Sbjct: 151 INFRYFFARKTMFVKYA--------QGFVVLPGGFGTFDELFEALTLVQTRKVTS-FPV- 200
Query: 75 FLVMNYDSFYKKLLDFLGDCE-DWGTVAKDEVASLWKICDSNSEALSYL 122
V+ +++ L+D++ D D+G +++ + A L ++ D EA++ +
Sbjct: 201 --VLFGSHYWQGLVDWIRDSVLDYGCISEPD-AQLMQVTDDVDEAVAIM 246
>gi|298483297|ref|ZP_07001476.1| decarboxylase family protein [Bacteroides sp. D22]
gi|336403523|ref|ZP_08584238.1| hypothetical protein HMPREF0127_01551 [Bacteroides sp. 1_1_30]
gi|295085902|emb|CBK67425.1| conserved hypothetical protein, DprA/Smf-related, family 2
[Bacteroides xylanisolvens XB1A]
gi|298270614|gb|EFI12196.1| decarboxylase family protein [Bacteroides sp. D22]
gi|335945853|gb|EGN07660.1| hypothetical protein HMPREF0127_01551 [Bacteroides sp. 1_1_30]
Length = 197
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 21/134 (15%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
P+ + +Q ++L+++ RK + D + ++ALPGG GTL+E+ E
Sbjct: 70 PRFMVEQNWHHTGLTELIEVESMHERKRKMADLS--------DGIIALPGGCGTLEELLE 121
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
I+ QL G L P +++N + F+ LL+ L D + + +WK+ + E
Sbjct: 122 IITWKQL---GLYLN-PIVILNINGFFDPLLEMLEKAID-ENFMRRQHGDIWKVAQTPEE 176
Query: 118 ALSYLAE--FYDLS 129
A+ L E +D+S
Sbjct: 177 AVQLLYETPVWDIS 190
>gi|169628433|ref|YP_001702082.1| hypothetical protein MAB_1340 [Mycobacterium abscessus ATCC 19977]
gi|418419581|ref|ZP_12992764.1| hypothetical protein MBOL_13090 [Mycobacterium abscessus subsp.
bolletii BD]
gi|419711532|ref|ZP_14238995.1| hypothetical protein OUW_18406 [Mycobacterium abscessus M93]
gi|419714804|ref|ZP_14242215.1| hypothetical protein S7W_10129 [Mycobacterium abscessus M94]
gi|420863304|ref|ZP_15326697.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 4S-0303]
gi|420867701|ref|ZP_15331086.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
4S-0726-RA]
gi|420872133|ref|ZP_15335513.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
4S-0726-RB]
gi|420908908|ref|ZP_15372222.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
6G-0125-R]
gi|420915294|ref|ZP_15378599.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
6G-0125-S]
gi|420919683|ref|ZP_15382981.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
6G-0728-S]
gi|420926177|ref|ZP_15389463.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 6G-1108]
gi|420965647|ref|ZP_15428861.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
3A-0810-R]
gi|420976526|ref|ZP_15439708.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 6G-0212]
gi|420981905|ref|ZP_15445075.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
6G-0728-R]
gi|420986731|ref|ZP_15449892.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 4S-0206]
gi|421006429|ref|ZP_15469544.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
3A-0119-R]
gi|421011771|ref|ZP_15474865.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
3A-0122-R]
gi|421016690|ref|ZP_15479758.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
3A-0122-S]
gi|421022506|ref|ZP_15485554.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 3A-0731]
gi|421027991|ref|ZP_15491028.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
3A-0930-R]
gi|421033046|ref|ZP_15496068.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
3A-0930-S]
gi|421038041|ref|ZP_15501052.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
4S-0116-R]
gi|421042488|ref|ZP_15505493.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
4S-0116-S]
gi|169240400|emb|CAM61428.1| Conserved hypothetical protein [Mycobacterium abscessus]
gi|364001211|gb|EHM22407.1| hypothetical protein MBOL_13090 [Mycobacterium abscessus subsp.
bolletii BD]
gi|382938854|gb|EIC63183.1| hypothetical protein OUW_18406 [Mycobacterium abscessus M93]
gi|382945193|gb|EIC69493.1| hypothetical protein S7W_10129 [Mycobacterium abscessus M94]
gi|392073104|gb|EIT98944.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
4S-0726-RA]
gi|392073824|gb|EIT99662.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 4S-0303]
gi|392076322|gb|EIU02155.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
4S-0726-RB]
gi|392122522|gb|EIU48285.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
6G-0125-R]
gi|392122978|gb|EIU48740.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
6G-0125-S]
gi|392133688|gb|EIU59430.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
6G-0728-S]
gi|392140084|gb|EIU65815.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 6G-1108]
gi|392170785|gb|EIU96462.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 6G-0212]
gi|392173923|gb|EIU99589.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
6G-0728-R]
gi|392188148|gb|EIV13787.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 4S-0206]
gi|392202181|gb|EIV27778.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
3A-0119-R]
gi|392210346|gb|EIV35915.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
3A-0122-R]
gi|392215203|gb|EIV40751.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 3A-0731]
gi|392216160|gb|EIV41705.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
3A-0122-S]
gi|392226255|gb|EIV51769.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
4S-0116-R]
gi|392229587|gb|EIV55097.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
3A-0930-S]
gi|392231897|gb|EIV57401.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
3A-0930-R]
gi|392241554|gb|EIV67042.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
4S-0116-S]
gi|392257635|gb|EIV83084.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus
3A-0810-R]
Length = 250
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 14/106 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A A V LPGG GTLDE+FE L L+Q ++ + P+
Sbjct: 143 INFRYFFVRKTMFVKYA--------QAFVCLPGGFGTLDELFEALTLVQTRKV-TRFPII 193
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEAL 119
L Y + LLD++ G G V + ++A L I DS EA+
Sbjct: 194 LLGTEY---WSGLLDWIRGTMLPAGKVGEQDIA-LLSITDSVDEAV 235
>gi|134301638|ref|YP_001121606.1| hypothetical protein FTW_0578 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|421751404|ref|ZP_16188451.1| hypothetical protein B345_02799 [Francisella tularensis subsp.
tularensis AS_713]
gi|421753256|ref|ZP_16190255.1| hypothetical protein B344_02760 [Francisella tularensis subsp.
tularensis 831]
gi|421756986|ref|ZP_16193875.1| hypothetical protein B342_02794 [Francisella tularensis subsp.
tularensis 80700103]
gi|421758847|ref|ZP_16195687.1| hypothetical protein B341_02804 [Francisella tularensis subsp.
tularensis 70102010]
gi|424674166|ref|ZP_18111090.1| hypothetical protein B229_02765 [Francisella tularensis subsp.
tularensis 70001275]
gi|134049415|gb|ABO46486.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis WY96-3418]
gi|409087675|gb|EKM87764.1| hypothetical protein B344_02760 [Francisella tularensis subsp.
tularensis 831]
gi|409087862|gb|EKM87949.1| hypothetical protein B345_02799 [Francisella tularensis subsp.
tularensis AS_713]
gi|409091686|gb|EKM91677.1| hypothetical protein B341_02804 [Francisella tularensis subsp.
tularensis 70102010]
gi|409092993|gb|EKM92953.1| hypothetical protein B342_02794 [Francisella tularensis subsp.
tularensis 80700103]
gi|417435226|gb|EKT90143.1| hypothetical protein B229_02765 [Francisella tularensis subsp.
tularensis 70001275]
Length = 237
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
R+F RK I ++ + + +PGG GTLDE+F+I LIQ G ++ +P ++
Sbjct: 127 RYFFTRKAMFIKHSM--------SYIVMPGGFGTLDELFDITTLIQ---TGKKVKMPIIL 175
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVH 136
D F+ L++++ V +E +L + DS E + +AE Y +S+ + H
Sbjct: 176 YGKD-FWGGLMEWIKTTLVGKGVISEEEVNLLTLVDSIDETIEIIAEHY-MSTYSSKAH 232
>gi|159039661|ref|YP_001538914.1| hypothetical protein Sare_4133 [Salinispora arenicola CNS-205]
gi|157918496|gb|ABV99923.1| conserved hypothetical protein [Salinispora arenicola CNS-205]
Length = 283
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + A A V LPGG GT+DE+FE L L+Q ++ + PV
Sbjct: 152 IEFRYFFARKTMFVKYA--------QAFVVLPGGFGTMDELFEALTLVQTGKV-TRFPVV 202
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
+ ++Y ++ LLD+L D
Sbjct: 203 LMGVDY---WRGLLDWLRDT 219
>gi|365959259|ref|YP_004940826.1| hypothetical protein FCOL_00920 [Flavobacterium columnare ATCC
49512]
gi|365735940|gb|AEW85033.1| hypothetical protein FCOL_00920 [Flavobacterium columnare ATCC
49512]
Length = 240
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCE-DWGT 99
V +PGG GTLDE+FE + LIQ ++IG P +++ + F+ LLD++ + D
Sbjct: 149 GFVVMPGGFGTLDELFEAITLIQTKKIGR---FPIILVGTE-FWSGLLDWIKNVMIDKQK 204
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFY 126
A E +L KI D+ E + L FY
Sbjct: 205 NANPEDMNLIKIVDTEDEVVEALDNFY 231
>gi|134097616|ref|YP_001103277.1| lysine decarboxylase [Saccharopolyspora erythraea NRRL 2338]
gi|291010016|ref|ZP_06567989.1| lysine decarboxylase family protein [Saccharopolyspora erythraea
NRRL 2338]
gi|133910239|emb|CAM00352.1| lysine decarboxylase family protein [Saccharopolyspora erythraea
NRRL 2338]
Length = 261
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 14/114 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK I A A + LPGG GT+DE+FE L L+Q +++ ++ PV
Sbjct: 155 VNFRYFFARKTMFIKYA--------QAFICLPGGFGTMDELFESLTLVQTKKV-TKFPV- 204
Query: 75 FLVMNYDSFYKKLLDFLGDCE-DWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
V+ S+++ L D++ D G + + E+ L + D +A+S + E Y
Sbjct: 205 --VLFGKSYWQGLYDWVRDSMLATGKIGEKEMGLL-HLTDDIDDAVSIVEEAYQ 255
>gi|427409885|ref|ZP_18900087.1| TIGR00730 family protein [Sphingobium yanoikuyae ATCC 51230]
gi|425712018|gb|EKU75033.1| TIGR00730 family protein [Sphingobium yanoikuyae ATCC 51230]
Length = 292
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GT DEMFE+L LIQ G P+P L+ D F+ K++DF D G +
Sbjct: 204 ALAVFPGGFGTFDEMFELLTLIQ---TGKMKPIPILLFGKD-FWNKVVDFEA-LADEGVI 258
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+ +++ +L ++ +A + + +FY
Sbjct: 259 SHNDL-NLLTWVETAEDAWAAVQDFY 283
>gi|78356823|ref|YP_388272.1| hypothetical protein [Desulfovibrio alaskensis G20]
gi|78219228|gb|ABB38577.1| Conserved hypothetical protein CHP00730 [Desulfovibrio alaskensis
G20]
Length = 218
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
D ++F RK I A+ A V +PGG+GTLDE+ E L Q +RI + P
Sbjct: 118 DFKYFFVRKLMFIKYAM--------AYVVMPGGIGTLDELTEAFVLTQTKRIKA---FPI 166
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
++ N S++ LLD++ D ++E L + D+ E L+Y+
Sbjct: 167 ILYN-SSYWNGLLDWIRDKMVSEGFIREEELDLITVKDTPEEVLAYI 212
>gi|423214593|ref|ZP_17201121.1| TIGR00730 family protein [Bacteroides xylanisolvens CL03T12C04]
gi|392692499|gb|EIY85736.1| TIGR00730 family protein [Bacteroides xylanisolvens CL03T12C04]
Length = 197
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 21/134 (15%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
P+ + +Q ++L+++ RK + D + ++ALPGG GTL+E+ E
Sbjct: 70 PRFMVEQNWHHTGLTELIEVESMHERKRKMADLS--------DGIIALPGGCGTLEELLE 121
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
I+ QL G L P +++N + F+ LL+ L D + + +WK+ + E
Sbjct: 122 IITWKQL---GLYLN-PIVILNINGFFDPLLEMLEKAID-ENFMRRQHGDIWKVAQTPEE 176
Query: 118 ALSYLAE--FYDLS 129
A+ L E +D+S
Sbjct: 177 AVQLLYETPVWDIS 190
>gi|424842163|ref|ZP_18266788.1| TIGR00730 family protein [Saprospira grandis DSM 2844]
gi|395320361|gb|EJF53282.1| TIGR00730 family protein [Saprospira grandis DSM 2844]
Length = 237
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 17/117 (14%)
Query: 13 QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELP 72
++ + ++F RK + A A+V LPGG GT+DE+FE+L L+Q ++ P
Sbjct: 123 KIFNFKYFFIRKVMFVKYA--------QALVVLPGGFGTMDELFEVLTLVQTQKSS---P 171
Query: 73 VPFLVMNYDSFYKKLLDFLGDC---EDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
VP +++ + F+ L D++ + ++ KD L I D E + + EFY
Sbjct: 172 VPIILVGSE-FWTGLKDWIKNVMLEQEHNVSPKD--LDLMPITDDPQEVVRIINEFY 225
>gi|381199086|ref|ZP_09906238.1| putative nucleotide-binding protein [Sphingobium yanoikuyae
XLDN2-5]
Length = 292
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GT DEMFE+L LIQ G P+P L+ D F+ K++DF D G +
Sbjct: 204 ALAVFPGGFGTFDEMFELLTLIQ---TGKMKPIPILLFGKD-FWNKVVDFEA-LADEGVI 258
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+ +++ +L ++ +A + + +FY
Sbjct: 259 SHNDL-NLLTWVETAEDAWAAVQDFY 283
>gi|283778839|ref|YP_003369594.1| hypothetical protein Psta_1051 [Pirellula staleyi DSM 6068]
gi|283437292|gb|ADB15734.1| conserved hypothetical protein [Pirellula staleyi DSM 6068]
Length = 719
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 14/114 (12%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R+F+ RK + A A+V PGG GTLDE+FE+L L Q +R+ E+PV
Sbjct: 615 FRYFALRKMHFLMRA--------KALVVFPGGFGTLDELFEVLTLRQTQRM-QEIPV--- 662
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSS 130
++ ++ ++DF D G +A DE +L + +S +EA + F L +
Sbjct: 663 ILYGRDYWSNVIDF-QYLADEGVIA-DEHLNLIQFAESPNEAWDIITRFNKLRA 714
>gi|375256430|ref|YP_005015597.1| hypothetical protein BFO_2938 [Tannerella forsythia ATCC 43037]
gi|363406211|gb|AEW19897.1| TIGR00730 family protein [Tannerella forsythia ATCC 43037]
Length = 178
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 13/111 (11%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
++L+ + RK + D + AV+ALPGG GTL+E+ EI+ QL
Sbjct: 79 TELIRVETMHERKQRMADMS--------DAVIALPGGCGTLEELMEIITWRQL----GLY 126
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
P +++N + +Y LL+ L ED + + LW++ ++ EA+ +
Sbjct: 127 HHPVVILNTNHYYDPLLEMLNRAED-EQFMRLQRRMLWQVAETPEEAMRMI 176
>gi|312795715|ref|YP_004028637.1| 3-isopropylmalate dehydrogenase [Burkholderia rhizoxinica HKI 454]
gi|312167490|emb|CBW74493.1| 3-isopropylmalate dehydrogenase (EC 1.1.1.85) [Burkholderia
rhizoxinica HKI 454]
Length = 259
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC-EDWGT 99
AV+ +PGG GTLDE+ E+L LIQ ++ VP +++ +F+K LLD+ D E G
Sbjct: 155 AVIVMPGGFGTLDELAEVLTLIQTKKSRH---VPIILVG-STFWKGLLDWFRDSLEPMGL 210
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYD 127
+ +V L ++ D + L + FY+
Sbjct: 211 IGPHDV-ELMQVIDEPDQVLEAVLAFYE 237
>gi|392969129|ref|ZP_10334545.1| UPF0717 protein [Fibrisoma limi BUZ 3]
gi|387843491|emb|CCH56599.1| UPF0717 protein [Fibrisoma limi BUZ 3]
Length = 138
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
V+ALPGG GTLDE+FEILA QL+ P ++N + +Y LL L D G +
Sbjct: 55 GVIALPGGYGTLDELFEILAWRQLKIYDG----PIALINSNGYYDLLLQQLDRMVDDGFL 110
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
K E +L + ++ EAL + +F++
Sbjct: 111 -KSENRALLVVSETVPEALEAIGKFWE 136
>gi|160900167|ref|YP_001565749.1| hypothetical protein Daci_4735 [Delftia acidovorans SPH-1]
gi|160365751|gb|ABX37364.1| conserved hypothetical protein [Delftia acidovorans SPH-1]
Length = 289
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE+L L+Q G VP ++ + F+K+LL+ E+ GT+
Sbjct: 206 ALVAFPGGFGTLDELFEVLTLMQ---TGKTHSVPVILFGTE-FWKRLLNIDLMIEE-GTI 260
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+ ++ L++ D EA + + +F+
Sbjct: 261 SPKDL-QLFRYTDDPVEAWALIKQFH 285
>gi|146302429|ref|YP_001197020.1| hypothetical protein Fjoh_4702 [Flavobacterium johnsoniae UW101]
gi|146156847|gb|ABQ07701.1| conserved hypothetical protein 730 [Flavobacterium johnsoniae
UW101]
Length = 193
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 34 NDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGD 93
ND CD V+ALPGG GTL+E+FE+L QL P ++N D FY L++ L
Sbjct: 95 NDLCD--GVIALPGGFGTLEELFEMLTWAQL----GLHKKPIAILNIDGFYDALIELLKV 148
Query: 94 CEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
+ G + KD AS+ + D+ + L+ + +
Sbjct: 149 MVEKGLL-KDVNASMVLVSDNIEDLLNKMRNY 179
>gi|150024935|ref|YP_001295761.1| hypothetical protein FP0845 [Flavobacterium psychrophilum JIP02/86]
gi|149771476|emb|CAL42945.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
Length = 242
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 7/88 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC--EDWG 98
V +PGG GTLDE+FE + LIQ ++IG + P+ ++ +F+ L+D++ E
Sbjct: 151 GFVVMPGGFGTLDELFEAITLIQTKKIG-KFPI---ILVGTTFWSGLMDWVQQVMIEREK 206
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFY 126
TV++D++ L +I D+ E + L FY
Sbjct: 207 TVSQDDM-KLIQIVDTEDEVVDALDRFY 233
>gi|333913763|ref|YP_004487495.1| hypothetical protein DelCs14_2121 [Delftia sp. Cs1-4]
gi|333743963|gb|AEF89140.1| Conserved hypothetical protein CHP00730 [Delftia sp. Cs1-4]
Length = 289
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE+L L+Q G VP ++ + F+K+LL+ E+ GT+
Sbjct: 206 ALVAFPGGFGTLDELFEVLTLMQ---TGKTHSVPVILFGTE-FWKRLLNIDLMIEE-GTI 260
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+ ++ L++ D EA + + +F+
Sbjct: 261 SPKDL-QLFRYTDDPVEAWALIKQFH 285
>gi|89094216|ref|ZP_01167158.1| hypothetical protein MED92_13538 [Neptuniibacter caesariensis]
gi|89081471|gb|EAR60701.1| hypothetical protein MED92_13538 [Neptuniibacter caesariensis]
Length = 186
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 13/114 (11%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
S+L+ + ++RK +++ + +ALPGG GTLDE+FE++ L Q+ +
Sbjct: 79 SELIQVDDMASRKQKMLEIS--------EGFIALPGGTGTLDEIFEMITLSQIGQ--HHK 128
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
P FL N FY+ L+ FL D G + D A L ++ D + L + F
Sbjct: 129 PCGFL--NSTGFYQPLITFLKQMRDQGFLHPDYFAML-QVNDDPIQLLDQMRSF 179
>gi|404496127|ref|YP_006720233.1| Rossmann fold nucleotide-binding protein [Geobacter metallireducens
GS-15]
gi|418065450|ref|ZP_12702823.1| hypothetical protein GeomeDRAFT_0720 [Geobacter metallireducens
RCH3]
gi|78193736|gb|ABB31503.1| Rossmann fold nucleotide-binding protein [Geobacter metallireducens
GS-15]
gi|373562190|gb|EHP88407.1| hypothetical protein GeomeDRAFT_0720 [Geobacter metallireducens
RCH3]
Length = 342
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 3 SPKVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALI 62
P + + +L++ ++F RK + + A+ PGG GTLDE E+ LI
Sbjct: 143 QPNPVMLKNPRLINYKYFFNRKVAFVK--------ESNALAVFPGGFGTLDEAMEVFTLI 194
Query: 63 QLERIGSELPVPFLVMNYDS-FYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSY 121
Q G P P ++++ ++ ++ + DF+ +C E S++ I EA+
Sbjct: 195 Q---TGKTSPKPLVLIDDNTGYWDRWFDFVKNCILGKGFISAEDFSIFTITRDEDEAIRV 251
Query: 122 LAEFY 126
+ +FY
Sbjct: 252 IDDFY 256
>gi|118497814|ref|YP_898864.1| hypothetical protein FTN_1229 [Francisella novicida U112]
gi|194323786|ref|ZP_03057562.1| conserved hypothetical protein [Francisella novicida FTE]
gi|208779877|ref|ZP_03247221.1| conserved hypothetical protein [Francisella novicida FTG]
gi|254373170|ref|ZP_04988659.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida GA99-3549]
gi|254374624|ref|ZP_04990105.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|385793201|ref|YP_005826177.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|118423720|gb|ABK90110.1| conserved protein of unknown function [Francisella novicida U112]
gi|151570897|gb|EDN36551.1| conserved hypothetical protein [Francisella novicida GA99-3549]
gi|151572343|gb|EDN37997.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|194322150|gb|EDX19632.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida FTE]
gi|208744332|gb|EDZ90632.1| conserved hypothetical protein [Francisella novicida FTG]
gi|332678526|gb|AEE87655.1| hypothetical protein FNFX1_1269 [Francisella cf. novicida Fx1]
Length = 237
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 29/127 (22%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
R+F RK I ++ + + +PGG GTLDE+F+I LIQ G ++ +P ++
Sbjct: 127 RYFFTRKAMFIKHSM--------SYIVMPGGFGTLDELFDITTLIQ---TGKKVKMPIIL 175
Query: 78 MNYDSFYKKLLDFLGDCEDW--------GTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
Y K DF G +W G ++K+EV +L + DS E + +AE Y ++
Sbjct: 176 ------YGK--DFWGGLMEWIKTTLVGKGVISKEEV-NLLTLVDSIDETIEIIAEHY-MN 225
Query: 130 SIDKRVH 136
+ + H
Sbjct: 226 TYSSKAH 232
>gi|301311737|ref|ZP_07217662.1| decarboxylase family protein [Bacteroides sp. 20_3]
gi|423337464|ref|ZP_17315208.1| TIGR00730 family protein [Parabacteroides distasonis CL09T03C24]
gi|300830297|gb|EFK60942.1| decarboxylase family protein [Bacteroides sp. 20_3]
gi|409237293|gb|EKN30093.1| TIGR00730 family protein [Parabacteroides distasonis CL09T03C24]
Length = 200
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV+ALPGG GTL+E+ EI+ QL G L P +++N + +Y LL+ L + +
Sbjct: 108 AVIALPGGCGTLEELLEIITWKQL---GLYLN-PIVILNINHYYDPLLELLRNAMN-ENF 162
Query: 101 AKDEVASLWKICDSNSEAL 119
+ + A +W + D+ EA+
Sbjct: 163 MRPQHAKMWAVADTPEEAI 181
>gi|256838275|ref|ZP_05543785.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262383162|ref|ZP_06076299.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|256739194|gb|EEU52518.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262296040|gb|EEY83971.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 200
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV+ALPGG GTL+E+ EI+ QL G L P +++N + +Y LL+ L + +
Sbjct: 108 AVIALPGGCGTLEELLEIITWKQL---GLYLN-PIVILNINHYYDPLLELLRNAMN-ENF 162
Query: 101 AKDEVASLWKICDSNSEAL 119
+ + A +W + D+ EA+
Sbjct: 163 MRPQHAKMWAVADTPEEAI 181
>gi|30249440|ref|NP_841510.1| hypothetical protein NE1469 [Nitrosomonas europaea ATCC 19718]
gi|30138803|emb|CAD85380.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718]
Length = 239
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R F ARK+ I A TA V +PGG GTLDE+ E L L+Q G +P +
Sbjct: 124 FRHFFARKYMFIKFA--------TAYVVMPGGFGTLDELMEALTLVQ---TGKTRKMPII 172
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVH 136
++ D F+ ++D+ E L +I D S+ + + +Y+ S +
Sbjct: 173 LVCSD-FWTGVIDWFRQVLVQHDFISSEDMDLIQIVDEPSQVVDAIFRYYETSGFEPSAA 231
Query: 137 EVNLK 141
E N++
Sbjct: 232 ERNIQ 236
>gi|254438396|ref|ZP_05051890.1| conserved hypothetical protein TIGR00730, putative [Octadecabacter
antarcticus 307]
gi|198253842|gb|EDY78156.1| conserved hypothetical protein TIGR00730, putative [Octadecabacter
antarcticus 307]
Length = 296
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE FE L LIQ R+ VPFL+ +F++ ++++ E GT+
Sbjct: 205 AITVFPGGFGTLDETFEALTLIQTGRMER---VPFLLFGR-AFWESIINWDALSES-GTI 259
Query: 101 AKDEVASLWKICDSNSEALSYL 122
++D++A L+K ++ EA+ L
Sbjct: 260 SQDDLA-LFKFVETAEEAVDAL 280
>gi|410694323|ref|YP_003624945.1| putative lysine decarboxylase [Thiomonas sp. 3As]
gi|294340748|emb|CAZ89140.1| putative lysine decarboxylase [Thiomonas sp. 3As]
Length = 314
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDE+FE+L L Q ++ + P+ V+ +SF++KL++F E G +
Sbjct: 213 ALVCFPGGFGTLDELFEVLTLTQARKV-RQRPI---VLFGESFWRKLINFDYLVET-GMI 267
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSID 132
A +++ L+ ++ +A LA ++L+ D
Sbjct: 268 AAEDL-DLFHFVETAEQAWDVLARAFELNGAD 298
>gi|379730097|ref|YP_005322293.1| hypothetical protein SGRA_1978 [Saprospira grandis str. Lewin]
gi|378575708|gb|AFC24709.1| hypothetical protein SGRA_1978 [Saprospira grandis str. Lewin]
Length = 237
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 17/117 (14%)
Query: 13 QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELP 72
++ + ++F RK + A A+V LPGG GT+DE+FE+L L+Q ++ P
Sbjct: 123 KIFNFKYFFIRKVMFVKYA--------QALVVLPGGFGTMDELFEVLTLVQTQK---SSP 171
Query: 73 VPFLVMNYDSFYKKLLDFLGDC---EDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
VP +++ F+ L D++ + ++ KD L I D E + + EFY
Sbjct: 172 VPIILVG-SEFWTGLKDWIKNVMLEQEHNVSPKD--LDLMPITDDPQEVVRIINEFY 225
>gi|429748070|ref|ZP_19281289.1| TIGR00730 family protein [Capnocytophaga sp. oral taxon 380 str.
F0488]
gi|429161457|gb|EKY03857.1| TIGR00730 family protein [Capnocytophaga sp. oral taxon 380 str.
F0488]
Length = 259
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 61/115 (53%), Gaps = 15/115 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ +F ARK + + A VA+PGG GTLDE+FE L L+Q +I +P
Sbjct: 149 IKFNYFFARKVMFVKYS--------KAFVAMPGGFGTLDELFETLTLVQTYKIDK---IP 197
Query: 75 FLVMNYDSFYKKLLDFLGDC--EDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+++ D ++ L+D++ E + ++ +++ L+ + D+ E + + +FY+
Sbjct: 198 IILVGTD-YWSGLVDWIKKILLEKFNNISAEDL-DLFHLVDTEDEVIKVIEDFYN 250
>gi|83941895|ref|ZP_00954357.1| decarboxylase family protein [Sulfitobacter sp. EE-36]
gi|83847715|gb|EAP85590.1| decarboxylase family protein [Sulfitobacter sp. EE-36]
Length = 283
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDEMFE L LIQ R+ VPFL+ +F++K++++ D GT+
Sbjct: 191 AICVFPGGFGTLDEMFETLTLIQTGRMSR---VPFLLFGR-AFWEKIINWDA-LADAGTI 245
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 135
+ D+ L++ ++ EA+ L E +D + + V
Sbjct: 246 S-DQDLDLFQFVETADEAMK-LIENWDTAPAREEV 278
>gi|163814748|ref|ZP_02206137.1| hypothetical protein COPEUT_00899 [Coprococcus eutactus ATCC 27759]
gi|158450383|gb|EDP27378.1| TIGR00730 family protein [Coprococcus eutactus ATCC 27759]
Length = 188
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 17/122 (13%)
Query: 6 VLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLE 65
+L + ++L+ RK + D D A + PGG+GTLDE FEIL L QL
Sbjct: 72 ILYENITELITTETMRERKQ------IMEDRAD--AFIMTPGGIGTLDEFFEILTLKQLG 123
Query: 66 RIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWG--TVAKDEVASLWKICDSNSEALSYLA 123
R G + +V N + F++ LL + + G T A +E+ + + D L YL
Sbjct: 124 RHGKAI----VVYNQNGFFEPLLTMMSETAVKGFMTNATNEI---YAVMDDADAILDYLE 176
Query: 124 EF 125
+
Sbjct: 177 SY 178
>gi|338210535|ref|YP_004654584.1| hypothetical protein [Runella slithyformis DSM 19594]
gi|336304350|gb|AEI47452.1| Conserved hypothetical protein CHP00730 [Runella slithyformis DSM
19594]
Length = 195
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
V+ LPGG GTLDEMFEILA QL+ P ++NY+ FY LL + + G +
Sbjct: 100 GVINLPGGYGTLDEMFEILAWAQLKIFHG----PVGLLNYNGFYNNLLAHMEVMVEEGFL 155
Query: 101 AKDEVASLWKICDSNSEALSYLAEF 125
K E L + D+ E L + F
Sbjct: 156 -KPENRDLLIVADNIEELLDKMQAF 179
>gi|373957069|ref|ZP_09617029.1| Conserved hypothetical protein CHP00730 [Mucilaginibacter paludis
DSM 18603]
gi|373893669|gb|EHQ29566.1| Conserved hypothetical protein CHP00730 [Mucilaginibacter paludis
DSM 18603]
Length = 235
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNY-DSFYKKLLDFLGDCEDWGT 99
+ LPGG GT+DE FE + LIQ +I + P+ F+ +Y +K + D + + E+
Sbjct: 144 GFIILPGGFGTMDESFEAITLIQTGKI-ARFPIVFVGTDYWGGLFKWVEDKMLNAEN--N 200
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYD 127
+ D++ +L+++ D+ EA+ ++ FYD
Sbjct: 201 IKADDL-NLYRVVDTAEEAVEHIFRFYD 227
>gi|284040360|ref|YP_003390290.1| hypothetical protein Slin_5525 [Spirosoma linguale DSM 74]
gi|283819653|gb|ADB41491.1| conserved hypothetical protein [Spirosoma linguale DSM 74]
Length = 183
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
V+ALPGG GT+DE+FEILA QL+ P ++N + FY +L L G +
Sbjct: 100 GVIALPGGYGTMDELFEILAWRQLKLYDG----PVAIVNTNGFYDLMLKQLDRMVADGFL 155
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
K E S+ + ++ E L ++EF+D
Sbjct: 156 -KPENRSILLVANTVDEVLQMISEFWD 181
>gi|431796288|ref|YP_007223192.1| hypothetical protein Echvi_0909 [Echinicola vietnamensis DSM 17526]
gi|430787053|gb|AGA77182.1| TIGR00730 family protein [Echinicola vietnamensis DSM 17526]
Length = 189
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 43 VALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAK 102
+A+PGG+GTL+E+FEI+ L QL I P + N + +Y KL++FL G + +
Sbjct: 102 IAMPGGIGTLEELFEIMTLNQLAYIQK----PLALYNVEGYYDKLIEFLNFSAKEGFLRQ 157
Query: 103 DEVASLWKICDSNSEALSYLAEF 125
++ L I D +E L +A +
Sbjct: 158 AQM-DLLIISDDPAEILDKMAAY 179
>gi|254876793|ref|ZP_05249503.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842814|gb|EET21228.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 237
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 29/127 (22%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
R+F RK I ++ + + +PGG GTLDE+F+I LIQ G ++ +P ++
Sbjct: 127 RYFFTRKAMFIKHSM--------SYIVMPGGFGTLDELFDITTLIQ---TGKKVKMPIIL 175
Query: 78 MNYDSFYKKLLDFLGDCEDW--------GTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
Y K DF G W G V+K+EV +L + DS E L +AE Y ++
Sbjct: 176 ------YGK--DFWGGLMAWIKTTLVQKGVVSKEEV-NLLTLVDSIDEVLEIVAEHY-MN 225
Query: 130 SIDKRVH 136
+ + H
Sbjct: 226 TYSSKAH 232
>gi|373957956|ref|ZP_09617916.1| Conserved hypothetical protein CHP00730 [Mucilaginibacter paludis
DSM 18603]
gi|373894556|gb|EHQ30453.1| Conserved hypothetical protein CHP00730 [Mucilaginibacter paludis
DSM 18603]
Length = 233
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 61/115 (53%), Gaps = 12/115 (10%)
Query: 13 QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELP 72
+L++ ++F RK + A + +PGG GTLDE FE + LIQ +I + P
Sbjct: 123 KLLEFKYFFVRKVMFMKYA--------QGFIVMPGGFGTLDEFFEAVTLIQTGKI-ARFP 173
Query: 73 VPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+ + +Y + L+++ D G K E +L+++ D+ +A++++ +FY+
Sbjct: 174 IVLVGSDY---WSGLIEWAKDKMLSGGNIKAEDLNLFRLVDTAEDAVNHIVKFYE 225
>gi|83855372|ref|ZP_00948902.1| decarboxylase family protein [Sulfitobacter sp. NAS-14.1]
gi|83843215|gb|EAP82382.1| decarboxylase family protein [Sulfitobacter sp. NAS-14.1]
Length = 283
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDEMFE L LIQ R+ VPFL+ +F++K++++ D GT+
Sbjct: 191 AICVFPGGFGTLDEMFETLTLIQTGRMSR---VPFLLFGR-AFWEKIINWDA-LADAGTI 245
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 135
+ D+ L++ ++ EA+ L E +D + + V
Sbjct: 246 S-DQDLDLFQFVETADEAMR-LIENWDTAPAREEV 278
>gi|99082852|ref|YP_615006.1| hypothetical protein TM1040_3012 [Ruegeria sp. TM1040]
gi|99039132|gb|ABF65744.1| decarboxylase family protein [Ruegeria sp. TM1040]
Length = 282
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE+FE L LIQ R+ PVPFL+ SF++K++++ D GT+
Sbjct: 190 AICVFPGGFGTLDELFEALTLIQTGRME---PVPFLLFGR-SFWEKIINWEA-LADAGTI 244
Query: 101 AKDEVASLWKICDS 114
+ D+ L+K +S
Sbjct: 245 S-DQDLDLFKFVES 257
>gi|406879041|gb|EKD27776.1| hypothetical protein ACD_79C00583G0002 [uncultured bacterium]
Length = 281
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 13/111 (11%)
Query: 14 LVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPV 73
+ + +F RK + A A++ PGG GT+DE+ E L LIQ +++ +P+
Sbjct: 169 VFEFHYFFMRKFWFVYLA--------KALIVFPGGFGTMDELMEALTLIQTKKLRKHIPI 220
Query: 74 PFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
V+ F+ ++++F E WG ++ ++ L+ I D EA +YL
Sbjct: 221 ---VIFGKKFWNEVINFEKLVE-WGVISPQDL-DLFLITDDIDEAFNYLTR 266
>gi|56707892|ref|YP_169788.1| hypothetical protein FTT_0781c [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670363|ref|YP_666920.1| hypothetical protein FTF0781c [Francisella tularensis subsp.
tularensis FSC198]
gi|187931758|ref|YP_001891743.1| hypothetical protein FTM_1057 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254370383|ref|ZP_04986388.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254874703|ref|ZP_05247413.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|379717137|ref|YP_005305473.1| hypothetical protein FTU_0821 [Francisella tularensis subsp.
tularensis TIGB03]
gi|379725741|ref|YP_005317927.1| hypothetical protein FTV_0737 [Francisella tularensis subsp.
tularensis TI0902]
gi|385794542|ref|YP_005830948.1| hypothetical protein NE061598_04495 [Francisella tularensis subsp.
tularensis NE061598]
gi|421755417|ref|ZP_16192362.1| hypothetical protein B343_04472 [Francisella tularensis subsp.
tularensis 80700075]
gi|54112569|gb|AAV28918.1| NT02FT0336 [synthetic construct]
gi|56604384|emb|CAG45414.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320696|emb|CAL08797.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC198]
gi|151568626|gb|EDN34280.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|187712667|gb|ACD30964.1| conserved hypothetical protein [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254840702|gb|EET19138.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159077|gb|ADA78468.1| hypothetical protein NE061598_04495 [Francisella tularensis subsp.
tularensis NE061598]
gi|377827190|gb|AFB80438.1| hypothetical protein FTV_0737 [Francisella tularensis subsp.
tularensis TI0902]
gi|377828814|gb|AFB78893.1| hypothetical protein FTU_0821 [Francisella tularensis subsp.
tularensis TIGB03]
gi|409088134|gb|EKM88213.1| hypothetical protein B343_04472 [Francisella tularensis subsp.
tularensis 80700075]
Length = 237
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
R+F RK I ++ + + +PGG GTLDE+F+I LIQ G ++ +P ++
Sbjct: 127 RYFFTRKAMFIKHSM--------SYIVMPGGFGTLDELFDITTLIQ---TGKKVKIPIIL 175
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVH 136
D F+ L++++ V +E +L + DS E + +AE Y +++ + H
Sbjct: 176 YGKD-FWGGLMEWIKTTLVGKGVISEEEVNLLTLVDSIDETIEIIAEHY-MNTYSSKAH 232
>gi|399116302|emb|CCG19107.1| conserved hypothetical protein [Taylorella asinigenitalis 14/45]
Length = 222
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+SQ + ++F +RK + A + +PGG GT+DE+FE L L+Q G
Sbjct: 106 QSQSIYFKYFVSRKTTFF--------MNSWAYIIMPGGFGTMDELFEALTLVQ---TGKA 154
Query: 71 LPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
P +++ + F+K LLDF+ + + + L + D E L + E+Y
Sbjct: 155 NKAPIILVGSE-FWKGLLDFIKNGQLANGYISPKDLDLISVTDDADEVLKIVTEYY 209
>gi|254425212|ref|ZP_05038930.1| Possible lysine decarboxylase family [Synechococcus sp. PCC 7335]
gi|196192701|gb|EDX87665.1| Possible lysine decarboxylase family [Synechococcus sp. PCC 7335]
Length = 365
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 15/121 (12%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+++L+D R+F RK + + A+ PGG GT DE FE L LIQ G
Sbjct: 162 DTKLLDFRYFFTRKLFFLK--------ESDAIALFPGGFGTQDEAFESLTLIQ---TGKA 210
Query: 71 LPVPFLVMNYDS--FYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
P+P ++++ ++K +L + D G ++ D+ SL+ + DS +A+ + +FY
Sbjct: 211 TPLPLVLIDRPGGDYWKSWDHYLRNRLLDQGLISPDDT-SLYHLTDSIDDAIKSIEDFYR 269
Query: 128 L 128
+
Sbjct: 270 M 270
>gi|256819250|ref|YP_003140529.1| hypothetical protein Coch_0405 [Capnocytophaga ochracea DSM 7271]
gi|393780728|ref|ZP_10368935.1| TIGR00730 family protein [Capnocytophaga sp. oral taxon 412 str.
F0487]
gi|420149985|ref|ZP_14657149.1| TIGR00730 family protein [Capnocytophaga sp. oral taxon 335 str.
F0486]
gi|429755337|ref|ZP_19287998.1| TIGR00730 family protein [Capnocytophaga sp. oral taxon 324 str.
F0483]
gi|256580833|gb|ACU91968.1| conserved hypothetical protein [Capnocytophaga ochracea DSM 7271]
gi|392608012|gb|EIW90876.1| TIGR00730 family protein [Capnocytophaga sp. oral taxon 412 str.
F0487]
gi|394752771|gb|EJF36427.1| TIGR00730 family protein [Capnocytophaga sp. oral taxon 335 str.
F0486]
gi|429174902|gb|EKY16364.1| TIGR00730 family protein [Capnocytophaga sp. oral taxon 324 str.
F0483]
Length = 228
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 61/115 (53%), Gaps = 15/115 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ +F ARK + + A VA+PGG GTLDE+FE L L+Q +I +P
Sbjct: 118 IKFNYFFARKVMFVKYS--------KAFVAMPGGFGTLDELFETLTLVQTYKIDK---IP 166
Query: 75 FLVMNYDSFYKKLLDFLGDC--EDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+++ D ++ L+D++ E + ++ +++ L+ + D+ E + + +FY+
Sbjct: 167 IILVGTD-YWSGLVDWIKKILLEKFNNISAEDL-DLFHLVDTEDEVIKVIEDFYN 219
>gi|365875967|ref|ZP_09415492.1| hypothetical protein EAAG1_06837 [Elizabethkingia anophelis Ag1]
gi|442588590|ref|ZP_21007401.1| hypothetical protein D505_12221 [Elizabethkingia anophelis R26]
gi|365756479|gb|EHM98393.1| hypothetical protein EAAG1_06837 [Elizabethkingia anophelis Ag1]
gi|442561824|gb|ELR79048.1| hypothetical protein D505_12221 [Elizabethkingia anophelis R26]
Length = 243
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
+ +PGG GTLDE+ E L LIQ +IG P+ V+ F+ L+D+ +
Sbjct: 153 GFIVMPGGFGTLDELMEALTLIQTNKIG-RFPI---VLVGSEFWSGLIDWFKSSLLKNGL 208
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSI 131
+E +L++I D+ +A++++ FY+ +I
Sbjct: 209 ISEEDLNLYRIVDNADDAVAHIKAFYEKYAI 239
>gi|406889615|gb|EKD35757.1| hypothetical protein ACD_75C01790G0003 [uncultured bacterium]
Length = 227
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 40 TAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGD-CEDWG 98
+ V +PGG G+LDE+FE + LIQ ERI P P +++ + F+ L+D++ D G
Sbjct: 143 SGFVCMPGGFGSLDELFEAMTLIQTERI---KPFPIVLVGSE-FWTGLVDWIKDKLLSEG 198
Query: 99 TVAKDEVASLWKICDSNSEALSYLAE 124
+ D++ L+K+ D E + YL E
Sbjct: 199 NIHADDLL-LFKVLDDADEVVQYLQE 223
>gi|441520849|ref|ZP_21002513.1| hypothetical protein GSI01S_10_00660 [Gordonia sihwensis NBRC
108236]
gi|441459421|dbj|GAC60474.1| hypothetical protein GSI01S_10_00660 [Gordonia sihwensis NBRC
108236]
Length = 275
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 14/106 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A A V LPGG GTLDE+FE L L+Q +++ L P
Sbjct: 174 MNFRYFFVRKTMFVKYA--------QAFVCLPGGFGTLDELFEALTLVQTKKV---LRFP 222
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEAL 119
+++ + F+ L+D+L G E G ++ +V L + D+ +EA+
Sbjct: 223 IVLIGRE-FWGPLVDWLRGTLEAGGKISPGDV-DLLHVVDTAAEAV 266
>gi|315224689|ref|ZP_07866512.1| methionyl-tRNA formyltransferase [Capnocytophaga ochracea F0287]
gi|420160068|ref|ZP_14666857.1| TIGR00730 family protein [Capnocytophaga ochracea str. Holt 25]
gi|314945317|gb|EFS97343.1| methionyl-tRNA formyltransferase [Capnocytophaga ochracea F0287]
gi|394761056|gb|EJF43493.1| TIGR00730 family protein [Capnocytophaga ochracea str. Holt 25]
Length = 228
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 61/115 (53%), Gaps = 15/115 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ +F ARK + + A VA+PGG GTLDE+FE L L+Q +I +P
Sbjct: 118 IKFNYFFARKVMFVKYS--------KAFVAMPGGFGTLDELFETLTLVQTYKIDK---IP 166
Query: 75 FLVMNYDSFYKKLLDFLGDC--EDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+++ D ++ L+D++ E + ++ +++ L+ + D+ E + + +FY+
Sbjct: 167 IILVGTD-YWSGLVDWIKKILLEKFNNISAEDL-DLFHLVDTEDEVIKVIEDFYN 219
>gi|365869327|ref|ZP_09408874.1| hypothetical protein MMAS_12750 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|414580581|ref|ZP_11437721.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 5S-1215]
gi|418249027|ref|ZP_12875349.1| hypothetical protein MAB47J26_10077 [Mycobacterium abscessus 47J26]
gi|420876548|ref|ZP_15339920.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 5S-0304]
gi|420881908|ref|ZP_15345272.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 5S-0421]
gi|420888148|ref|ZP_15351502.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 5S-0422]
gi|420893671|ref|ZP_15357013.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 5S-0708]
gi|420898209|ref|ZP_15361545.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 5S-0817]
gi|420903960|ref|ZP_15367281.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 5S-1212]
gi|420930491|ref|ZP_15393767.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense
1S-151-0930]
gi|420938357|ref|ZP_15401626.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense
1S-152-0914]
gi|420940741|ref|ZP_15404004.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense
1S-153-0915]
gi|420946094|ref|ZP_15409347.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense
1S-154-0310]
gi|420951008|ref|ZP_15414254.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense
2B-0626]
gi|420955179|ref|ZP_15418418.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense
2B-0107]
gi|420960580|ref|ZP_15423809.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense
2B-1231]
gi|420970734|ref|ZP_15433932.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 5S-0921]
gi|420991148|ref|ZP_15454300.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense
2B-0307]
gi|420996983|ref|ZP_15460123.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense
2B-0912-R]
gi|421001415|ref|ZP_15464546.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense
2B-0912-S]
gi|421048186|ref|ZP_15511182.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|353450682|gb|EHB99076.1| hypothetical protein MAB47J26_10077 [Mycobacterium abscessus 47J26]
gi|363998784|gb|EHM19990.1| hypothetical protein MMAS_12750 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|392090225|gb|EIU16038.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 5S-0304]
gi|392090963|gb|EIU16774.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 5S-0421]
gi|392092708|gb|EIU18513.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 5S-0422]
gi|392102261|gb|EIU28048.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 5S-0708]
gi|392107450|gb|EIU33232.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 5S-0817]
gi|392109218|gb|EIU34996.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 5S-1212]
gi|392115733|gb|EIU41501.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 5S-1215]
gi|392139509|gb|EIU65241.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense
1S-151-0930]
gi|392143872|gb|EIU69597.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense
1S-152-0914]
gi|392156217|gb|EIU81922.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense
1S-153-0915]
gi|392159302|gb|EIU84998.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense
1S-154-0310]
gi|392160785|gb|EIU86476.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense
2B-0626]
gi|392172939|gb|EIU98609.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus 5S-0921]
gi|392189227|gb|EIV14861.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense
2B-0912-R]
gi|392190159|gb|EIV15791.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense
2B-0307]
gi|392201005|gb|EIV26608.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense
2B-0912-S]
gi|392242351|gb|EIV67838.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense CCUG
48898]
gi|392254975|gb|EIV80438.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense
2B-1231]
gi|392255707|gb|EIV81168.1| methionyl-tRNA formyltransferase [Mycobacterium massiliense
2B-0107]
Length = 250
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 14/106 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A A V LPGG GTLDE+FE L L+Q ++ + P+
Sbjct: 143 INFRYFFVRKTMFVKYA--------QAFVCLPGGFGTLDELFEALTLVQTRKV-TRFPII 193
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEAL 119
L Y + LLD++ G G V + ++A L + DS EA+
Sbjct: 194 LLGTEY---WSGLLDWIRGTMLPAGKVGEQDIA-LLSVTDSVDEAV 235
>gi|322437142|ref|YP_004219354.1| hypothetical protein AciX9_3570 [Granulicella tundricola MP5ACTX9]
gi|321164869|gb|ADW70574.1| Conserved hypothetical protein CHP00730 [Granulicella tundricola
MP5ACTX9]
Length = 325
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GT+DEMFE+L L+Q ++ +LPV V+ ++K +L+ L G +
Sbjct: 212 ALVVFPGGFGTIDEMFELLTLVQTHKLAKDLPV---VIYGSEYWKSVLN-LELLAAKGAI 267
Query: 101 AKDEVASLWKICDSNSEALSYL 122
A+ ++ L++ D+ EA + L
Sbjct: 268 AQKDL-DLFQFADTPDEAFAIL 288
>gi|296314836|ref|ZP_06864777.1| methionyl-tRNA formyltransferase [Neisseria polysaccharea ATCC
43768]
gi|296838336|gb|EFH22274.1| methionyl-tRNA formyltransferase [Neisseria polysaccharea ATCC
43768]
Length = 210
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 14/114 (12%)
Query: 13 QLVDLRF--FSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
Q + LRF F+ RK + A V +PGG GTLDE+FEIL L+Q ++
Sbjct: 103 QDIALRFSRFAERKAAFFSYS--------QAYVVMPGGFGTLDELFEILTLVQTGKV--- 151
Query: 71 LPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
P P +++ +F+ L +++ + + ASL+ I D E ++YL+E
Sbjct: 152 PPRPVVLVG-KAFWSGLAEWISAQLLARGLISEGAASLFAISDDEDEIVAYLSE 204
>gi|256832044|ref|YP_003160771.1| hypothetical protein Jden_0806 [Jonesia denitrificans DSM 20603]
gi|256685575|gb|ACV08468.1| conserved hypothetical protein [Jonesia denitrificans DSM 20603]
Length = 267
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK + A + + LPGG GT DE+FE L L+Q +I +E P+
Sbjct: 147 VNFRYFFARKTMFVKYA--------SGFIVLPGGFGTFDELFEALTLVQTHKI-TEFPIV 197
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
+ +Y + L+ +L D + L+ + D+ EA+ +A+ D
Sbjct: 198 LVGKDY---WAGLIAWLKDSVAKRGMINPADVDLFHVVDTAEEAVQIVADHAD------S 248
Query: 135 VHEVNLKS 142
VH L+S
Sbjct: 249 VHAAALES 256
>gi|357060814|ref|ZP_09121578.1| hypothetical protein HMPREF9332_01135 [Alloprevotella rava F0323]
gi|355375647|gb|EHG22930.1| hypothetical protein HMPREF9332_01135 [Alloprevotella rava F0323]
Length = 191
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 25/118 (21%)
Query: 9 KQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIG 68
K SQL+ R RK + + +D+C VALPGGVGTL+E+ EI+ QL G
Sbjct: 75 KGMSQLIVTRDMHERKERMAEL---SDAC-----VALPGGVGTLEELLEIITWKQL---G 123
Query: 69 SELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEV------ASLWKICDSNSEALS 120
L P +V+N D + LL+ L +A DE A LW++ ++ EA+S
Sbjct: 124 LYLK-PIVVLNVDGCFSPLLEQL-------QLAVDERFMRPFHAQLWQVAETAEEAVS 173
>gi|227503776|ref|ZP_03933825.1| possible Rossmann fold nucleotide-binding protein [Corynebacterium
striatum ATCC 6940]
gi|227199600|gb|EEI79648.1| possible Rossmann fold nucleotide-binding protein [Corynebacterium
striatum ATCC 6940]
Length = 254
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + A + LPGG+GT+DE FE+L ++Q ++ + P
Sbjct: 143 LNFRYFFARKTMFLKYS--------QAFICLPGGMGTMDEFFEVLCMVQTGKVTN---YP 191
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
++M + ++ L+++L G E L+ + D EA++++ E + + S DKR
Sbjct: 192 IVLMGTE-YWSGLVEWLKSTLAAGGFINPEDLDLFLVTDDVDEAVAHIVECHKVMS-DKR 249
Query: 135 VH 136
V
Sbjct: 250 VR 251
>gi|207743835|ref|YP_002260227.1| hypothetical protein 730 [Ralstonia solanacearum IPO1609]
gi|421897736|ref|ZP_16328103.1| conserved hypothetical protein 730 [Ralstonia solanacearum MolK2]
gi|206588942|emb|CAQ35904.1| conserved hypothetical protein 730 [Ralstonia solanacearum MolK2]
gi|206595235|emb|CAQ62162.1| conserved hypothetical protein 730 [Ralstonia solanacearum IPO1609]
Length = 318
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
A + +PGG GTLDE+ E+L L+Q G VP +VM F+K LLD F G
Sbjct: 219 AFIVMPGGFGTLDELAEVLTLVQ---TGKSRSVP-VVMFGSRFWKGLLDWFRFTLLPMGL 274
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYD 127
+A+ ++ + +I D EAL + EFY+
Sbjct: 275 IAEHDL-DIMRIVDEPKEALDAVYEFYE 301
>gi|150009543|ref|YP_001304286.1| lysine decarboxylase [Parabacteroides distasonis ATCC 8503]
gi|255013164|ref|ZP_05285290.1| putative lysine decarboxylase [Bacteroides sp. 2_1_7]
gi|298373948|ref|ZP_06983906.1| decarboxylase family protein [Bacteroides sp. 3_1_19]
gi|410102627|ref|ZP_11297553.1| TIGR00730 family protein [Parabacteroides sp. D25]
gi|423334013|ref|ZP_17311794.1| TIGR00730 family protein [Parabacteroides distasonis CL03T12C09]
gi|149937967|gb|ABR44664.1| putative lysine decarboxylase [Parabacteroides distasonis ATCC
8503]
gi|298268316|gb|EFI09971.1| decarboxylase family protein [Bacteroides sp. 3_1_19]
gi|409226162|gb|EKN19072.1| TIGR00730 family protein [Parabacteroides distasonis CL03T12C09]
gi|409238699|gb|EKN31490.1| TIGR00730 family protein [Parabacteroides sp. D25]
Length = 200
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV+ALPGG GTL+E+ EI+ QL G L P +++N + +Y LL+ L + +
Sbjct: 108 AVIALPGGCGTLEELLEIITWKQL---GLYLN-PIVILNINHYYDPLLELLRNAMN-ENF 162
Query: 101 AKDEVASLWKICDSNSEAL 119
+ + A +W + D+ EA+
Sbjct: 163 MRPQHAKMWAVADTPEEAI 181
>gi|298528313|ref|ZP_07015717.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511965|gb|EFI35867.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 239
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 12/118 (10%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
D R+F RK I A A V +PGG+GT+DE+ E L L+Q RI P P
Sbjct: 118 DFRYFFVRKVMFIKYA--------KAYVVMPGGLGTMDELLETLVLMQTRRIK---PFPV 166
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
+++ D F+ LL+++ + K SL+ + D+ E + + DL S K
Sbjct: 167 ILVGRD-FWDGLLNWMTEQMVSRGYMKKSDFSLFCMADTADEVVDLIKNKVDLHSFQK 223
>gi|325104136|ref|YP_004273790.1| hypothetical protein [Pedobacter saltans DSM 12145]
gi|324972984|gb|ADY51968.1| Conserved hypothetical protein CHP00730 [Pedobacter saltans DSM
12145]
Length = 234
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 14/92 (15%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
+ LPGG GTLDE+FE + LIQ +I + P+ V+ ++K LLD++ T+
Sbjct: 144 GYIVLPGGFGTLDELFEAITLIQTGKI-ARFPI---VLVGSDYWKGLLDWVEQ-----TI 194
Query: 101 AKDEVAS-----LWKICDSNSEALSYLAEFYD 127
K++ S L++I D+ EA ++ FYD
Sbjct: 195 LKEKNISPEDLNLYRIVDTAEEAAEHIFRFYD 226
>gi|41582345|gb|AAS07959.1| conserved hypothetical protein TIGR00730 [uncultured marine
bacterium 463]
Length = 221
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D R+F RK LI A+ PGG GT+DE+FE+L L+Q ++ + P+
Sbjct: 117 LDFRYFFTRKFLLIRYAI--------GFAIFPGGFGTVDELFELLTLVQTGKL-TRRPIV 167
Query: 75 FLVMNY-DSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+ Y Y+ LL+ + G ++ D++ + +I DS EA + L E+Y
Sbjct: 168 LVGREYWSGLYQWLLE---QVQSKGFISDDDL-DIVEIVDSAEEAAAILLEYY 216
>gi|169335382|ref|ZP_02862575.1| hypothetical protein ANASTE_01794 [Anaerofustis stercorihominis DSM
17244]
gi|169258120|gb|EDS72086.1| TIGR00730 family protein [Anaerofustis stercorihominis DSM 17244]
Length = 179
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 13/114 (11%)
Query: 9 KQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIG 68
K+ + L+ + S RKH + + + + LPGG+GTLDE FEIL L
Sbjct: 75 KECTDLISKKNMSERKHYMEEIS--------DGFIILPGGIGTLDEFFEILVLAS----K 122
Query: 69 SELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
+ L P ++ N D F+ +++ F+ + G + +++ L+ I D+ E Y+
Sbjct: 123 NVLNKPIVLFNTDGFFNEIISFMKMLLNKGMMG-EKIFDLFCITDNIKETFDYI 175
>gi|386332867|ref|YP_006029036.1| 3-isopropylmalate dehydrogenase [Ralstonia solanacearum Po82]
gi|334195315|gb|AEG68500.1| 3-isopropylmalate dehydrogenase [Ralstonia solanacearum Po82]
Length = 329
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
A + +PGG GTLDE+ E+L L+Q G VP +VM F+K LLD F G
Sbjct: 230 AFIVMPGGFGTLDELAEVLTLVQ---TGKSRSVP-VVMFGSRFWKGLLDWFRFTLLPMGL 285
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYD 127
+A+ ++ + +I D EAL + EFY+
Sbjct: 286 IAEHDL-DIMRIVDEPKEALDAVYEFYE 312
>gi|240014960|ref|ZP_04721873.1| hypothetical protein NgonD_10035 [Neisseria gonorrhoeae DGI18]
gi|240017408|ref|ZP_04723948.1| hypothetical protein NgonFA_09653 [Neisseria gonorrhoeae FA6140]
gi|240122029|ref|ZP_04734991.1| hypothetical protein NgonPI_09745 [Neisseria gonorrhoeae PID24-1]
gi|268597646|ref|ZP_06131813.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268599897|ref|ZP_06134064.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268682953|ref|ZP_06149815.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|291042918|ref|ZP_06568659.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|268551434|gb|EEZ46453.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268584028|gb|EEZ48704.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268623237|gb|EEZ55637.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|291013352|gb|EFE05318.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
Length = 210
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V +PGG GTLDE+FEIL L+Q ++ P P +++ +F+ L +++ +
Sbjct: 125 AYVVMPGGFGTLDELFEILTLVQTGKV---PPRPVVLVG-KAFWSGLAEWINAQLLARGM 180
Query: 101 AKDEVASLWKICDSNSEALSYLAE 124
+ ASL+ I D E ++YL+E
Sbjct: 181 ISEGAASLFSISDDEDEIIAYLSE 204
>gi|62258040|gb|AAX77762.1| unknown protein [synthetic construct]
Length = 272
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
R+F RK I ++ + + +PGG GTLDE+F+I LIQ G ++ +P ++
Sbjct: 153 RYFFTRKAMFIKHSM--------SYIVMPGGFGTLDELFDITTLIQ---TGKKVKIPIIL 201
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVH 136
D F+ L++++ V +E +L + DS E + +AE Y +++ + H
Sbjct: 202 YGKD-FWGGLMEWIKTTLVGKGVISEEEVNLLTLVDSIDETIEIIAEHY-MNTYSSKAH 258
>gi|256828277|ref|YP_003157005.1| hypothetical protein Dbac_0464 [Desulfomicrobium baculatum DSM
4028]
gi|256577453|gb|ACU88589.1| conserved hypothetical protein [Desulfomicrobium baculatum DSM
4028]
Length = 299
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 14/103 (13%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+F+ RK L+ A A+VA PGG GT+DE+FE L LIQ ++ P+P
Sbjct: 195 QFHYFAIRKMHLLMRA--------KALVAFPGGFGTMDELFEALTLIQTRKVK---PIPV 243
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEA 118
L+ F+ K+++F E+ GT+ +++ +L++ + EA
Sbjct: 244 LLFG-RRFWHKVVNFEALVEE-GTINAEDL-NLFQYVSTAEEA 283
>gi|258406225|ref|YP_003198967.1| hypothetical protein Dret_2105 [Desulfohalobium retbaense DSM 5692]
gi|257798452|gb|ACV69389.1| conserved hypothetical protein [Desulfohalobium retbaense DSM 5692]
Length = 305
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
+V PGG GTLDE+FE L L+Q +I P+P L+ + F++++++F D GT+
Sbjct: 211 GLVVFPGGFGTLDELFEALTLLQTRKIK---PIPVLLF-CERFWRRIINF-DALVDEGTI 265
Query: 101 AKDEVASLWKICDSNSEALSYLAE 124
++D++ ++ ++ EA LA+
Sbjct: 266 SQDDL-DFFQFVETAEEAWEILAQ 288
>gi|406934841|gb|EKD68999.1| hypothetical protein ACD_47C00323G0003 [uncultured bacterium]
Length = 189
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 14 LVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPV 73
++ ++F ARK + + A+V GGVGTLDE FE+L L+Q + + LPV
Sbjct: 1 MLKFKYFFARKLAF--------AKETNAIVLCHGGVGTLDEGFELLTLLQTGK-SNPLPV 51
Query: 74 PFLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
L +++KKL +F+ + G V+++++A L+KI S EA+ + FY
Sbjct: 52 VMLEPPGGNYWKKLDEFIKTEMLSEGLVSEEDLA-LYKIVYSADEAVDEVNNFY 104
>gi|383451113|ref|YP_005357834.1| hypothetical protein KQS_09215 [Flavobacterium indicum GPTSA100-9]
gi|380502735|emb|CCG53777.1| Protein of unknown function [Flavobacterium indicum GPTSA100-9]
Length = 241
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC-EDWGT 99
V +PGG GTLDEMFE + LIQ ++I ++ P+ ++ F+ LLD++ D
Sbjct: 150 GFVVMPGGFGTLDEMFEAITLIQTKKI-AKFPI---ILVGREFWTGLLDWIQSVIIDQFK 205
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFY 126
A E +L+KI D+ E + L FY
Sbjct: 206 NASPEDMNLFKIVDTEDEVVEALDNFY 232
>gi|268604498|ref|ZP_06138665.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268687380|ref|ZP_06154242.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|268588629|gb|EEZ53305.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268627664|gb|EEZ60064.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
Length = 210
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V +PGG GTLDE+FEIL L+Q ++ P P +++ +F+ L +++ +
Sbjct: 125 AYVVMPGGFGTLDELFEILTLVQTGKV---PPRPVVLVG-KAFWSGLAEWINAQLLARGM 180
Query: 101 AKDEVASLWKICDSNSEALSYLAE 124
+ ASL+ I D E ++YL+E
Sbjct: 181 ISEGAASLFSISDDEDEIIAYLSE 204
>gi|194099604|ref|YP_002002735.1| hypothetical protein NGK_2110 [Neisseria gonorrhoeae NCCP11945]
gi|193934894|gb|ACF30718.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
Length = 210
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V +PGG GTLDE+FEIL L+Q ++ P P +++ +F+ L +++ +
Sbjct: 125 AYVVMPGGFGTLDELFEILTLVQTGKV---PPRPVVLVG-KAFWSGLAEWINAQLLARGM 180
Query: 101 AKDEVASLWKICDSNSEALSYLAE 124
+ ASL+ I D E ++YL+E
Sbjct: 181 ISEGAASLFSISDDEDEIIAYLSE 204
>gi|407799064|ref|ZP_11145966.1| hypothetical protein OCGS_1039 [Oceaniovalibus guishaninsula
JLT2003]
gi|407059070|gb|EKE45004.1| hypothetical protein OCGS_1039 [Oceaniovalibus guishaninsula
JLT2003]
Length = 287
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE+FE L LIQ R+ VP L+ D F++ ++++ D GT+
Sbjct: 190 AICVFPGGFGTLDELFETLTLIQTGRMER---VPVLLFGGD-FWRDIVNWQA-LADAGTI 244
Query: 101 AKDEVASLWKICDSNSEALSYL 122
A D++ L++ ++ +EAL +
Sbjct: 245 APDDLG-LFRFVETAAEALEAI 265
>gi|313148103|ref|ZP_07810296.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313136870|gb|EFR54230.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 198
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV+ALPGG GTL+E+ EI+ QL G L P +++N + F+ LL L D G
Sbjct: 106 AVIALPGGCGTLEELLEIITWKQL---GLYLQ-PIVILNTNGFFDPLLTMLDKAID-GNF 160
Query: 101 AKDEVASLWKICDSNSEA--LSYLAEFYDLSSIDK 133
+ + +W + + EA L Y +D SSI K
Sbjct: 161 MRKQHGDIWHVAHTPEEAVDLVYSIPVWD-SSIRK 194
>gi|433771863|ref|YP_007302330.1| putative Rossmann fold nucleotide-binding protein [Mesorhizobium
australicum WSM2073]
gi|433663878|gb|AGB42954.1| putative Rossmann fold nucleotide-binding protein [Mesorhizobium
australicum WSM2073]
Length = 282
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 18/117 (15%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F+ RK + A AV PGG GT+DE FE L LIQ R+ +PV
Sbjct: 181 NFHYFAIRKMHFVMRA--------KAVAVFPGGFGTMDEFFETLTLIQTGRM-ERVPV-- 229
Query: 76 LVMNYDSFYKKL--LDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSS 130
++ SF+K+ LDFL + GT++ + + D+ EA ++ FY L S
Sbjct: 230 -ILFGKSFWKRAIDLDFLAEQ---GTISPGD-QDIIDFVDTADEAWGIISRFYKLGS 281
>gi|83746522|ref|ZP_00943573.1| 3-isopropylmalate dehydrogenase [Ralstonia solanacearum UW551]
gi|83726853|gb|EAP73980.1| 3-isopropylmalate dehydrogenase [Ralstonia solanacearum UW551]
Length = 329
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
A + +PGG GTLDE+ E+L L+Q G VP +VM F+K LLD F G
Sbjct: 230 AFIVMPGGFGTLDELAEVLTLVQ---TGKSRSVP-VVMFGSRFWKGLLDWFRFTLLPMGL 285
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYD 127
+A+ ++ + +I D EAL + EFY+
Sbjct: 286 IAEHDL-DIMRIVDEPKEALDAVYEFYE 312
>gi|387887155|ref|YP_006317454.1| hypothetical protein OOM_1599 [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|386871971|gb|AFJ43978.1| hypothetical protein OOM_1599 [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 237
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 29/127 (22%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
R+F RK I ++ + + +PGG GTLDE+F+I LIQ G ++ +P ++
Sbjct: 127 RYFFTRKAMFIKHSM--------SYIVMPGGFGTLDELFDITTLIQ---TGKKVKMPIIL 175
Query: 78 MNYDSFYKKLLDFLGDCEDW--------GTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
Y K DF G +W G V+K++V +L + DS E L +AE Y ++
Sbjct: 176 ------YGK--DFWGGLMEWIKTTLVQKGVVSKEDV-NLLTLVDSIDEVLEIVAEHY-MN 225
Query: 130 SIDKRVH 136
+ + H
Sbjct: 226 TYSSKAH 232
>gi|429195571|ref|ZP_19187596.1| TIGR00730 family protein [Streptomyces ipomoeae 91-03]
gi|428668758|gb|EKX67756.1| TIGR00730 family protein [Streptomyces ipomoeae 91-03]
Length = 252
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 14/111 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A V LPGG+GTLDE+FE L L+Q +++ + P+
Sbjct: 151 LNFRYFFVRKMMFVKYA--------QGFVVLPGGLGTLDELFEALTLVQTQKV-TRFPI- 200
Query: 75 FLVMNYDSFYKKLLDFLGDC-EDWGTVAKDEVASLWKICDSNSEALSYLAE 124
V+ +S++ L+D+L + G A+ ++A L+ + D EA++ +++
Sbjct: 201 --VLFGESYWSGLIDWLSNTLVAQGKAAQKDLA-LFHVTDDVEEAVAMVSK 248
>gi|423281329|ref|ZP_17260240.1| TIGR00730 family protein [Bacteroides fragilis HMW 610]
gi|424665736|ref|ZP_18102772.1| TIGR00730 family protein [Bacteroides fragilis HMW 616]
gi|404573989|gb|EKA78740.1| TIGR00730 family protein [Bacteroides fragilis HMW 616]
gi|404583033|gb|EKA87716.1| TIGR00730 family protein [Bacteroides fragilis HMW 610]
Length = 195
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV+ALPGG GTL+E+ EI+ QL G L P +++N + F+ LL L D G
Sbjct: 103 AVIALPGGCGTLEELLEIITWKQL---GLYLQ-PIVILNTNGFFDPLLTMLDKAID-GNF 157
Query: 101 AKDEVASLWKICDSNSEA--LSYLAEFYDLSSIDK 133
+ + +W + + EA L Y +D SSI K
Sbjct: 158 MRKQHGDIWHVAHTPEEAVDLVYSIPVWD-SSIRK 191
>gi|121602626|ref|YP_989570.1| hypothetical protein BARBAKC583_1322 [Bartonella bacilliformis
KC583]
gi|421761369|ref|ZP_16198172.1| hypothetical protein BbINS_06252 [Bartonella bacilliformis INS]
gi|120614803|gb|ABM45404.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
gi|411173153|gb|EKS43201.1| hypothetical protein BbINS_06252 [Bartonella bacilliformis INS]
Length = 272
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE+FE L L+Q R+ VP L+ F+K L++F + G +
Sbjct: 190 ALAVFPGGFGTLDELFEALTLMQTRRMQK---VPILMFG-KKFWKNLINF-DYLSEQGVI 244
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLS 129
+ ++ L D+ +EA + FY L+
Sbjct: 245 SPTDI-DLLTFVDTAAEAFEEIRSFYQLA 272
>gi|452912141|ref|ZP_21960794.1| hypothetical protein C884_01686 [Kocuria palustris PEL]
gi|452832723|gb|EME35551.1| hypothetical protein C884_01686 [Kocuria palustris PEL]
Length = 311
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL-GDCEDWGT 99
+ALPGG GTLDE+FE L L+Q ++ + PV V+ +F+ LL+++ G + G
Sbjct: 197 GFIALPGGFGTLDELFECLTLVQTGKM-TRFPV---VLMGVAFWTPLLEWIRGSLVEQGM 252
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYD 127
V+ D+ L ++ DS EA+ + E +D
Sbjct: 253 VSPDD-PDLVRLTDSAEEAVRIMREAHD 279
>gi|374375043|ref|ZP_09632701.1| Conserved hypothetical protein CHP00730 [Niabella soli DSM 19437]
gi|373231883|gb|EHP51678.1| Conserved hypothetical protein CHP00730 [Niabella soli DSM 19437]
Length = 249
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A + +PGG GT+DE FE + LIQ + I ++ P+ V+ FYK+L+ + + GT+
Sbjct: 150 AFIIMPGGFGTMDEFFETITLIQTKTI-TQFPI---VLFGKEFYKELMITIEGMAEQGTI 205
Query: 101 AKDEVASLWKICDSNSEALSYLAEF 125
+K+++ +L + D EA+ ++ ++
Sbjct: 206 SKEDM-NLVLLTDDVDEAMEHIRQY 229
>gi|254494586|ref|ZP_05107757.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|268595614|ref|ZP_06129781.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268602232|ref|ZP_06136399.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268685118|ref|ZP_06151980.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|385336551|ref|YP_005890498.1| hypothetical protein NGTW08_1678 [Neisseria gonorrhoeae
TCDC-NG08107]
gi|226513626|gb|EEH62971.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|268549003|gb|EEZ44421.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268586363|gb|EEZ51039.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268625402|gb|EEZ57802.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|317165094|gb|ADV08635.1| hypothetical protein NGTW08_1678 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 210
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V +PGG GTLDE+FEIL L+Q ++ P P +++ +F+ L +++ +
Sbjct: 125 AYVVMPGGFGTLDELFEILTLVQTGKV---PPRPVVLVG-KAFWSGLAEWINAQLLARGM 180
Query: 101 AKDEVASLWKICDSNSEALSYLAE 124
+ ASL+ I D E ++YL+E
Sbjct: 181 ISEGAASLFSISDDEDEIIAYLSE 204
>gi|383640684|ref|ZP_09953090.1| hypothetical protein SeloA3_02604 [Sphingomonas elodea ATCC 31461]
Length = 291
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GT DE FE+L LIQ ++ P+P L + F+ ++++F C D G +
Sbjct: 204 AVAVFPGGFGTFDESFELLTLIQTGKVD---PIPVLFYGKE-FWNRVVNFEALC-DEGVI 258
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+ ++ +L++ C++ E + +F+
Sbjct: 259 SPRDL-NLFRFCETAEEGWEIVQDFW 283
>gi|59802033|ref|YP_208745.1| hypothetical protein NGO1712 [Neisseria gonorrhoeae FA 1090]
gi|293398074|ref|ZP_06642279.1| conserved hypothetical protein [Neisseria gonorrhoeae F62]
gi|59718928|gb|AAW90333.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|291611337|gb|EFF40407.1| conserved hypothetical protein [Neisseria gonorrhoeae F62]
Length = 210
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V +PGG GTLDE+FEIL L+Q ++ P P +++ +F+ L +++ +
Sbjct: 125 AYVVMPGGFGTLDELFEILTLVQTGKV---PPRPVVLVG-KAFWSGLAEWINAQLLARGM 180
Query: 101 AKDEVASLWKICDSNSEALSYLAE 124
+ ASL+ I D E ++YL+E
Sbjct: 181 ISEGAASLFSISDDEDEIIAYLSE 204
>gi|218768935|ref|YP_002343447.1| hypothetical protein NMA2204 [Neisseria meningitidis Z2491]
gi|385327650|ref|YP_005881953.1| hypothetical protein NMBB_0313 [Neisseria meningitidis alpha710]
gi|421549841|ref|ZP_15995851.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 69166]
gi|433470571|ref|ZP_20427971.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 68094]
gi|433474762|ref|ZP_20432110.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 88050]
gi|433476860|ref|ZP_20434188.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 70012]
gi|433478936|ref|ZP_20436235.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 63041]
gi|433512646|ref|ZP_20469448.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 63049]
gi|433514654|ref|ZP_20471430.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 2004090]
gi|433516873|ref|ZP_20473626.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 96023]
gi|433519063|ref|ZP_20475789.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 65014]
gi|433521074|ref|ZP_20477775.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 61103]
gi|433523207|ref|ZP_20479879.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 97020]
gi|433525187|ref|ZP_20481833.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 69096]
gi|433527452|ref|ZP_20484065.1| putative lysine decarboxylase family protein [Neisseria
meningitidis NM3652]
gi|433529545|ref|ZP_20486144.1| putative lysine decarboxylase family protein [Neisseria
meningitidis NM3642]
gi|433531663|ref|ZP_20488232.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 2007056]
gi|433533641|ref|ZP_20490190.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 2001212]
gi|433538044|ref|ZP_20494531.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 70030]
gi|433540218|ref|ZP_20496675.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 63006]
gi|121052943|emb|CAM09297.1| hypothetical protein NMA2204 [Neisseria meningitidis Z2491]
gi|308388502|gb|ADO30822.1| hypothetical protein NMBB_0313 [Neisseria meningitidis alpha710]
gi|402331792|gb|EJU67124.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 69166]
gi|432212004|gb|ELK67948.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 68094]
gi|432212822|gb|ELK68757.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 88050]
gi|432218013|gb|ELK73878.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 70012]
gi|432218910|gb|ELK74762.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 63041]
gi|432250401|gb|ELL05796.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 63049]
gi|432256087|gb|ELL11412.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 96023]
gi|432256318|gb|ELL11641.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 2004090]
gi|432256804|gb|ELL12118.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 65014]
gi|432262540|gb|ELL17778.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 61103]
gi|432262663|gb|ELL17899.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 97020]
gi|432263335|gb|ELL18555.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 69096]
gi|432267521|gb|ELL22699.1| putative lysine decarboxylase family protein [Neisseria
meningitidis NM3652]
gi|432269683|gb|ELL24840.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 2007056]
gi|432269796|gb|ELL24949.1| putative lysine decarboxylase family protein [Neisseria
meningitidis NM3642]
gi|432274194|gb|ELL29287.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 2001212]
gi|432276184|gb|ELL31246.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 70030]
gi|432278199|gb|ELL33243.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 63006]
Length = 210
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V +PGG GTLDE+FEIL L+Q ++ P P +++ +F+ L +++ +
Sbjct: 125 AYVVMPGGFGTLDELFEILTLVQTGKV---PPRPIVLVG-KAFWSGLAEWINAQLLARGL 180
Query: 101 AKDEVASLWKICDSNSEALSYLAE 124
+ ASL+ I D E ++YL+E
Sbjct: 181 ISEGAASLFAISDDEDEIVAYLSE 204
>gi|385854458|ref|YP_005900971.1| hypothetical protein NMBM01240355_0288 [Neisseria meningitidis
M01-240355]
gi|416181481|ref|ZP_11611675.1| hypothetical protein TIGR00730 [Neisseria meningitidis M13399]
gi|433464266|ref|ZP_20421760.1| putative lysine decarboxylase family protein [Neisseria
meningitidis NM422]
gi|433487471|ref|ZP_20444650.1| putative lysine decarboxylase family protein [Neisseria
meningitidis M13255]
gi|433489645|ref|ZP_20446784.1| putative lysine decarboxylase family protein [Neisseria
meningitidis NM418]
gi|325135087|gb|EGC57715.1| hypothetical protein TIGR00730 [Neisseria meningitidis M13399]
gi|325203399|gb|ADY98852.1| conserved hypothetical protein TIGR00730 [Neisseria meningitidis
M01-240355]
gi|432206076|gb|ELK62091.1| putative lysine decarboxylase family protein [Neisseria
meningitidis NM422]
gi|432226236|gb|ELK81969.1| putative lysine decarboxylase family protein [Neisseria
meningitidis M13255]
gi|432230641|gb|ELK86316.1| putative lysine decarboxylase family protein [Neisseria
meningitidis NM418]
Length = 210
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V +PGG GTLDE+FEIL L+Q ++ P P +++ +F+ L +++ +
Sbjct: 125 AYVVMPGGFGTLDELFEILTLVQTGKV---PPRPIVLVG-KAFWSGLAEWINAQLLARGL 180
Query: 101 AKDEVASLWKICDSNSEALSYLAE 124
+ ASL+ I D E ++YL+E
Sbjct: 181 ISEGAASLFAISDDEDEIVAYLSE 204
>gi|416168004|ref|ZP_11607834.1| hypothetical protein TIGR00730 [Neisseria meningitidis OX99.30304]
gi|416186311|ref|ZP_11613672.1| hypothetical protein TIGR00730 [Neisseria meningitidis M0579]
gi|418287501|ref|ZP_12900094.1| hypothetical protein TIGR00730 [Neisseria meningitidis NM233]
gi|418289749|ref|ZP_12901996.1| hypothetical protein TIGR00730 [Neisseria meningitidis NM220]
gi|433504159|ref|ZP_20461104.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 9506]
gi|433535939|ref|ZP_20492458.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 77221]
gi|325131010|gb|EGC53737.1| hypothetical protein TIGR00730 [Neisseria meningitidis OX99.30304]
gi|325137110|gb|EGC59706.1| hypothetical protein TIGR00730 [Neisseria meningitidis M0579]
gi|372203010|gb|EHP16751.1| hypothetical protein TIGR00730 [Neisseria meningitidis NM220]
gi|372203703|gb|EHP17321.1| hypothetical protein TIGR00730 [Neisseria meningitidis NM233]
gi|432243542|gb|ELK99053.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 9506]
gi|432276360|gb|ELL31418.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 77221]
Length = 210
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V +PGG GTLDE+FEIL L+Q ++ P P +++ +F+ L +++ +
Sbjct: 125 AYVVMPGGFGTLDELFEILTLVQTGKV---PPRPIVLVG-KAFWSGLAEWINAQLLARGL 180
Query: 101 AKDEVASLWKICDSNSEALSYLAE 124
+ ASL+ I D E ++YL+E
Sbjct: 181 ISEGAASLFAISDDEDEIVAYLSE 204
>gi|260219740|emb|CBA26585.1| hypothetical protein Csp_E36730 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 295
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE++ L+Q ++ PVP ++ D ++K+L++ E+ G +
Sbjct: 212 ALVAFPGGFGTLDELFEVITLVQTKKAK---PVPIILFGTD-YWKRLINIDVLVEE-GAI 266
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ +++ +L D +A + FY L
Sbjct: 267 SPEDL-NLLHYTDDPQDAWDTIRNFYGL 293
>gi|436836939|ref|YP_007322155.1| hypothetical protein FAES_3555 [Fibrella aestuarina BUZ 2]
gi|384068352|emb|CCH01562.1| hypothetical protein FAES_3555 [Fibrella aestuarina BUZ 2]
Length = 284
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 17/116 (14%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ FF RK + A V +PGG+GTLDE+FE L LIQ ++I + P+
Sbjct: 175 INFDFFFVRKVMFVKYA--------QGFVVMPGGMGTLDELFEALTLIQTKKI-ARFPI- 224
Query: 75 FLVMNYDSFYKKLLDFLGDC---EDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
V+ ++++ L+D++ D ++ +D L + D+ +EA+ + +FYD
Sbjct: 225 --VLVGKAYWQGLIDWIMDVMLGQEHNINPED--MKLISLVDTPTEAVKVIDDFYD 276
>gi|336413021|ref|ZP_08593374.1| hypothetical protein HMPREF1017_00482 [Bacteroides ovatus
3_8_47FAA]
gi|335943067|gb|EGN04909.1| hypothetical protein HMPREF1017_00482 [Bacteroides ovatus
3_8_47FAA]
Length = 195
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 21/134 (15%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
P+ + +Q ++L+++ RK + + + ++ALPGG GTL+E+ E
Sbjct: 68 PRFMVEQNWHHTGLTELIEVESMHERKQKMANLS--------DGIIALPGGCGTLEELLE 119
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
I+ QL G L P +++N + F+ LL+ L D + + + +WK+ + E
Sbjct: 120 IITWKQL---GLYLN-PIIILNTNRFFDPLLEMLEKAID-ESFMRRQHGDIWKVAQTPEE 174
Query: 118 ALSYLAE--FYDLS 129
A+ L E +D+S
Sbjct: 175 AVQLLYETPVWDIS 188
>gi|292493390|ref|YP_003528829.1| hypothetical protein Nhal_3413 [Nitrosococcus halophilus Nc4]
gi|291581985|gb|ADE16442.1| conserved hypothetical protein [Nitrosococcus halophilus Nc4]
Length = 271
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV+ PGG GTLDE+FE+L L+Q +I LP+ V+ ++ + ++F +G +
Sbjct: 179 AVIVFPGGFGTLDELFELLTLVQTGKIRKHLPI---VLFGKEYWNETINFEALVH-YGNI 234
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
++ L++ DS EA ++L + +I++R
Sbjct: 235 DPQDLNLLYQ-TDSVDEAYTFLVDHLARYAIEER 267
>gi|291287249|ref|YP_003504065.1| hypothetical protein Dacet_1337 [Denitrovibrio acetiphilus DSM
12809]
gi|290884409|gb|ADD68109.1| conserved hypothetical protein [Denitrovibrio acetiphilus DSM
12809]
Length = 229
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 14/121 (11%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ +F RK L+ A A + LPGG GT+DE+FE + LIQ +I LP P
Sbjct: 122 ITFDYFFVRKVMLVKYA--------NAFIILPGGFGTMDELFEAITLIQTGKI---LPFP 170
Query: 75 FLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
+++ D ++ L+D++ + G + K ++ L ++ D+ E LS + EF + SS
Sbjct: 171 TILVGKD-YWCGLVDWIKNRMLGSGYINKSDMNFL-QVVDTADEVLSIIKEFLETSSRAA 228
Query: 134 R 134
R
Sbjct: 229 R 229
>gi|424776843|ref|ZP_18203818.1| lysine decarboxylase [Alcaligenes sp. HPC1271]
gi|422887883|gb|EKU30277.1| lysine decarboxylase [Alcaligenes sp. HPC1271]
Length = 222
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
++Q + +F +RK A +ALPGG GTLDE+FE++ L+Q ++
Sbjct: 108 QTQSLQFEYFYSRKATFF--------MHSWAYIALPGGFGTLDELFEVMTLVQTGKV--- 156
Query: 71 LPVPFLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
P P +++ SF+ L++++GD + G + ++ +L + D E + Y+ +
Sbjct: 157 PPAPIVLIG-TSFWSGLIEWIGDQLMEMGLIGPKDL-NLLVLTDDLDEVMGYINQ 209
>gi|317052244|ref|YP_004113360.1| hypothetical protein CHP00730 [Desulfurispirillum indicum S5]
gi|316947328|gb|ADU66804.1| Conserved hypothetical protein CHP00730 [Desulfurispirillum indicum
S5]
Length = 358
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 17/136 (12%)
Query: 13 QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELP 72
+L++ ++F RK + A +AVV PGG GT DE FE L L+Q + + +P
Sbjct: 153 KLINFKYFFTRKVNFLKEA--------SAVVLFPGGFGTHDEAFETLTLVQTGK-SNIIP 203
Query: 73 VPFLVMNYDSFYKKLLDFLG-DCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSI 131
V F+ ++ ++ L +++ G +++D++ L+ I +S +A+S + FY
Sbjct: 204 VIFIDPTGNNLWRGLEEYMRVHLYRTGLISEDDM-HLYTIMNSIDDAISEILHFY----- 257
Query: 132 DKRVHEVNLKSTHGIV 147
KR H H ++
Sbjct: 258 -KRFHSYRYVRDHLVI 272
>gi|296270981|ref|YP_003653613.1| hypothetical protein Tbis_3023 [Thermobispora bispora DSM 43833]
gi|296093768|gb|ADG89720.1| conserved hypothetical protein [Thermobispora bispora DSM 43833]
Length = 248
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 14/106 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK I A C VALPGG GTLDE+FE L L+Q ++ S P
Sbjct: 143 IEFRYFFVRKTMFIKYA-----C---GFVALPGGFGTLDELFEALTLVQTRKVTS---FP 191
Query: 75 FLVMNYDSFYKKLLDFLGDC-EDWGTVAKDEVASLWKICDSNSEAL 119
++M F+ L+D++ D G + ++E A L + D EA+
Sbjct: 192 VILMG-SKFWSPLIDWVRTTLVDTGKLTEEE-AGLISLTDDPDEAV 235
>gi|188997002|ref|YP_001931253.1| hypothetical protein SYO3AOP1_1082 [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932069|gb|ACD66699.1| conserved hypothetical protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 225
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 24/121 (19%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
+++++ +F ARK L+ A TA V PGG GTLDE+ E L LIQ +++
Sbjct: 111 TEILNFNYFFARKVMLVKYA--------TAFVLFPGGFGTLDEITETLTLIQTKKLK--- 159
Query: 72 PVPFLVMNY-DSFYKKLLDFLGDCEDWGTVAKD-----EVASLWKICDSNSEALSYLAEF 125
PF V+ Y + ++ + +L D V KD E L+K D E + Y+ ++
Sbjct: 160 --PFPVILYGNEYWNGFVQWLNDV-----VVKDGYIDKEDTELFKQMDDIDEIVDYIDQW 212
Query: 126 Y 126
Y
Sbjct: 213 Y 213
>gi|226365434|ref|YP_002783217.1| hypothetical protein ROP_60250 [Rhodococcus opacus B4]
gi|226243924|dbj|BAH54272.1| hypothetical protein [Rhodococcus opacus B4]
Length = 265
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 14/107 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + A + LPGG GTLDE+FE L L+Q ++ + P+
Sbjct: 151 INFRYFFARKTMFVKYS--------QAFICLPGGFGTLDELFEALTLVQTRKV-TRFPII 201
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALS 120
Y + L+D++ G E G +++ +V +L + DS EA+
Sbjct: 202 LFGTEY---WSGLVDWIRGTLERSGKISEGDV-NLLHVTDSVEEAVQ 244
>gi|375290618|ref|YP_005125158.1| hypothetical protein CD241_0891 [Corynebacterium diphtheriae 241]
gi|376245451|ref|YP_005135690.1| hypothetical protein CDHC01_0891 [Corynebacterium diphtheriae HC01]
gi|371580289|gb|AEX43956.1| hypothetical protein CD241_0891 [Corynebacterium diphtheriae 241]
gi|372108081|gb|AEX74142.1| hypothetical protein CDHC01_0891 [Corynebacterium diphtheriae HC01]
Length = 254
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 14/109 (12%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R+F ARK + + A V LPGG+GTLDE+FE+L ++Q ++ + P+
Sbjct: 149 FRYFFARKTMFLKYS--------QAFVCLPGGMGTLDELFEVLCMVQTGKV-TNFPI--- 196
Query: 77 VMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
V+ SF+ L+D++ G ++K+++ SL+ + DS EA+ ++ +
Sbjct: 197 VLLGTSFWGGLVDWIKQRLVGEGMISKEDL-SLFLVTDSVDEAVEFIRQ 244
>gi|56478730|ref|YP_160319.1| hypothetical protein ebA5802 [Aromatoleum aromaticum EbN1]
gi|56314773|emb|CAI09418.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 299
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 14/112 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+F+ RK + AV AVV+ PGG GTLDE+FE+L L Q +I P
Sbjct: 188 QFHYFAIRKMHFLMRAV--------AVVSFPGGFGTLDELFEVLTLTQTRKIRRR---PI 236
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+++ D F+++L+DF E G ++ ++V L++ ++ EA + Y+
Sbjct: 237 ILIGRD-FWERLIDFDVMIEH-GVISPEDV-ELFRYVETADEAWDAIKAAYN 285
>gi|152992798|ref|YP_001358519.1| decarboxylase family protein [Sulfurovum sp. NBC37-1]
gi|151424659|dbj|BAF72162.1| decarboxylase family protein [Sulfurovum sp. NBC37-1]
Length = 315
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 14/110 (12%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
L +F+ RK + A A+V PGG GT+DE FE+L L+Q ++ P+P +
Sbjct: 212 LHYFAVRKMHFLRRA--------KALVVFPGGFGTMDECFEVLTLVQTRKVD---PIPII 260
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+ +S++K ++ F G E+ V E ++ ++ EA + ++Y
Sbjct: 261 FVG-ESYWKNMVYFEGFVEE--GVIDPEDMDIFTFVETAEEAWETILQWY 307
>gi|296136618|ref|YP_003643860.1| hypothetical protein Tint_2179 [Thiomonas intermedia K12]
gi|295796740|gb|ADG31530.1| conserved hypothetical protein [Thiomonas intermedia K12]
Length = 314
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDE+FE+L L Q ++ + P+ V+ +SF++KL++F E G +
Sbjct: 213 ALVCFPGGFGTLDELFEVLTLTQARKV-RQRPI---VLFGESFWRKLINFDYLVET-GMI 267
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSID 132
A +++ L+ ++ +A LA ++L+ D
Sbjct: 268 AVEDL-DLFHFVETAEQAWDVLARAFELNGAD 298
>gi|225621363|ref|YP_002722621.1| Rossmann fold nucleotide-binding protein [Brachyspira
hyodysenteriae WA1]
gi|225216183|gb|ACN84917.1| predicted Rossmann fold nucleotide-binding protein [Brachyspira
hyodysenteriae WA1]
Length = 221
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ R+F ARK + A AV+ PGG GT+DEMFE L LIQ + + +P
Sbjct: 117 LKFRYFFARKVMFLKYA--------KAVIIFPGGFGTMDEMFETLTLIQTKVLDR---MP 165
Query: 75 FLVMNYDSFYKKLLDFL 91
+VMN S+Y L++++
Sbjct: 166 LIVMN-SSYYTDLIEWI 181
>gi|126140262|ref|XP_001386653.1| hypothetical protein PICST_79930 [Scheffersomyces stipitis CBS
6054]
gi|126093937|gb|ABN68624.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 223
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A +ALPGG GTL+E+ E++ QL P +V N D FY L F+ D D V
Sbjct: 130 AFIALPGGYGTLEELMEVVTWFQLNIHNK----PIVVFNMDGFYDNFLKFIEDSIDNEFV 185
Query: 101 AKDEVASLWKICDSNSEALSYLAEF 125
+ + K+C++ E + E+
Sbjct: 186 SSKN-GEIIKVCNTVEEVFQAIEEY 209
>gi|354615037|ref|ZP_09032850.1| Conserved hypothetical protein CHP00730 [Saccharomonospora
paurometabolica YIM 90007]
gi|353220604|gb|EHB85029.1| Conserved hypothetical protein CHP00730 [Saccharomonospora
paurometabolica YIM 90007]
Length = 289
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 18/115 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK I + A + LPGG GTLDE+FE L L+Q +++ ++ PV
Sbjct: 183 VNFRYFFARKTMFIKYS--------QAFICLPGGFGTLDELFEALTLVQTKKV-TKFPV- 232
Query: 75 FLVMNYDSFYKKLLDFLGD---CEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
V+ +++K L +++ D E G V++ E A+L + D +A+ + E Y
Sbjct: 233 --VLFGSTYWKGLYEWVRDTVLAE--GKVSERE-AALLHVTDDIDDAVGVVMEAY 282
>gi|237756259|ref|ZP_04584818.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691578|gb|EEP60627.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 225
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 24/121 (19%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
++ ++ +F ARK L+ A TA V PGG GTLDE+ E L LIQ +++
Sbjct: 111 TETLNFNYFFARKVMLVKYA--------TAFVLFPGGFGTLDELTETLTLIQTKKLK--- 159
Query: 72 PVPFLVMNY-DSFYKKLLDFLGDCEDWGTVAKD-----EVASLWKICDSNSEALSYLAEF 125
PF V+ Y + ++ + +L D V KD E L+K D+ E + Y+ ++
Sbjct: 160 --PFPVILYGNEYWNGFVQWLNDV-----VVKDGYIDKEDTELFKQIDNIDEIVDYIDQW 212
Query: 126 Y 126
Y
Sbjct: 213 Y 213
>gi|421537321|ref|ZP_15983509.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 93003]
gi|421558317|ref|ZP_16004200.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 92045]
gi|402319798|gb|EJU55303.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 93003]
gi|402338499|gb|EJU73732.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 92045]
Length = 210
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V +PGG GTLDE+FEIL L+Q ++ P P +++ +F+ L +++ +
Sbjct: 125 AYVVMPGGFGTLDELFEILTLVQTGKV---PPRPVVLVG-KAFWSGLAEWINAQLLARGL 180
Query: 101 AKDEVASLWKICDSNSEALSYLAE 124
+ ASL+ I D E ++YL+E
Sbjct: 181 ISEGAASLFAISDDEDEIVAYLSE 204
>gi|332881505|ref|ZP_08449154.1| TIGR00730 family protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|357045580|ref|ZP_09107215.1| TIGR00730 family protein [Paraprevotella clara YIT 11840]
gi|332680503|gb|EGJ53451.1| TIGR00730 family protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|355531442|gb|EHH00840.1| TIGR00730 family protein [Paraprevotella clara YIT 11840]
Length = 195
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Query: 29 DCAVRNDSCDRTA--VVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKK 86
D R + R + V+ALPGG GTL+E+ EI+ QL G L P +V+N + FY
Sbjct: 89 DMHTRKQTMARLSDGVIALPGGCGTLEELLEIITWKQL---GLYLN-PIVVLNTEGFYNP 144
Query: 87 LLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 135
LL L + + + +WK+ S +EAL L Y DK V
Sbjct: 145 LLKMLEHAAEEHFMRPAHLG-IWKVASSPAEALDLL---YSTPLWDKEV 189
>gi|303328438|ref|ZP_07358875.1| methionyl-tRNA formyltransferase [Desulfovibrio sp. 3_1_syn3]
gi|345893170|ref|ZP_08843973.1| hypothetical protein HMPREF1022_02633 [Desulfovibrio sp.
6_1_46AFAA]
gi|302861432|gb|EFL84369.1| methionyl-tRNA formyltransferase [Desulfovibrio sp. 3_1_syn3]
gi|345046373|gb|EGW50260.1| hypothetical protein HMPREF1022_02633 [Desulfovibrio sp.
6_1_46AFAA]
Length = 222
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 15/109 (13%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ R+F RK + A+ A V +PGG+GT+DE+ E L Q R PF
Sbjct: 121 NFRYFFIRKFMFVKYAM--------AYVVMPGGMGTIDELSEAFVLAQTGRT-----RPF 167
Query: 76 LVMNYDS-FYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
++ YDS F+ LL++L G + + E+ L +CD+ E +++L
Sbjct: 168 PIILYDSRFWSGLLEWLRKSMAAGGFIHETEIDKLVTVCDTPEEVVNHL 216
>gi|339326742|ref|YP_004686435.1| rossmann fold nucleotide-binding protein [Cupriavidus necator N-1]
gi|338166899|gb|AEI77954.1| rossmann fold nucleotide-binding protein [Cupriavidus necator N-1]
Length = 239
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
A + +PGG GTLDE+ E+L L+Q G VP +VM F+K LLD F G
Sbjct: 140 AFIVMPGGFGTLDELAEVLTLVQ---TGKSRSVP-VVMFGSRFWKGLLDWFRFTLLPMGL 195
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 135
+A+ ++ L KI D E L + ++Y+ DK +
Sbjct: 196 IAEHDL-DLMKIVDEPHEVLEAVYDYYEQRGGDKPI 230
>gi|261400515|ref|ZP_05986640.1| methionyl-tRNA formyltransferase [Neisseria lactamica ATCC 23970]
gi|421862636|ref|ZP_16294341.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|269209777|gb|EEZ76232.1| methionyl-tRNA formyltransferase [Neisseria lactamica ATCC 23970]
gi|309379760|emb|CBX21536.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 210
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V +PGG GTLDE+FEIL L+Q ++ P P +++ +F+ L +++ +
Sbjct: 125 AYVVMPGGFGTLDELFEILTLVQTGKV---PPRPVVLVG-KAFWSGLAEWINAQLLARGL 180
Query: 101 AKDEVASLWKICDSNSEALSYLAE 124
+ ASL+ I D E ++YL+E
Sbjct: 181 ISEGAASLFAISDDEDEIVAYLSE 204
>gi|407802174|ref|ZP_11149016.1| hypothetical protein S7S_01249 [Alcanivorax sp. W11-5]
gi|407023849|gb|EKE35594.1| hypothetical protein S7S_01249 [Alcanivorax sp. W11-5]
Length = 211
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 14/121 (11%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + AV V PGG GT+DE+FE L L+Q +I S P+
Sbjct: 97 INFRYFFVRKLMFVKHAV--------GFVVFPGGFGTMDELFEALTLVQTGKIAS-FPI- 146
Query: 75 FLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
V+ +S++ L+D+LG + G + ++ L ++ DS +A + Y D+
Sbjct: 147 --VLFGESYWSGLVDWLGQRMLEEGCIGPADM-KLIQVTDSVDQAFRTVVRSYRKQPDDR 203
Query: 134 R 134
R
Sbjct: 204 R 204
>gi|399031013|ref|ZP_10731192.1| TIGR00730 family protein [Flavobacterium sp. CF136]
gi|398070689|gb|EJL61977.1| TIGR00730 family protein [Flavobacterium sp. CF136]
Length = 193
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 34 NDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGD 93
ND CD V+ALPGG GTLDE+FE++ QL P ++N + FY LL+ +
Sbjct: 95 NDLCD--GVIALPGGFGTLDELFEMITWAQL----GLHKKPIAILNINGFYDSLLELMQT 148
Query: 94 CEDWG 98
D G
Sbjct: 149 MTDKG 153
>gi|300113292|ref|YP_003759867.1| hypothetical protein Nwat_0588 [Nitrosococcus watsonii C-113]
gi|299539229|gb|ADJ27546.1| conserved hypothetical protein [Nitrosococcus watsonii C-113]
Length = 241
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R F +RK + A +A V LPGG GTLDE+ EIL L+Q G +P
Sbjct: 124 VNFRHFFSRKVMFVKYA--------SAYVVLPGGFGTLDELAEILTLVQ---TGKSRRIP 172
Query: 75 FLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
+++ + SF+ L+D+ + + G + ++ L+K+ D E + + FY+ +
Sbjct: 173 -IILVHSSFWAGLIDWFKEYLVEEGMIDHHDL-DLFKVLDKPQEVVDAIFSFYESRGFEP 230
Query: 134 RVHE 137
E
Sbjct: 231 SAEE 234
>gi|297170726|gb|ADI21749.1| predicted Rossmann fold nucleotide-binding protein [uncultured
actinobacterium HF0130_15N16]
Length = 193
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A +ALPGG+GTLDE+ E+L QL VP ++++ +F+ +L+D L + G +
Sbjct: 111 AAIALPGGLGTLDELVELLLWTQLGIHN----VPLVLLDTGTFWGQLVDLLENLSQQGFL 166
Query: 101 AKDEVASLWKICDSNSEALSYLAEF 125
K +W I ++ +AL+ L +
Sbjct: 167 -KPARGIIWDIAENPEQALTTLKQM 190
>gi|160884931|ref|ZP_02065934.1| hypothetical protein BACOVA_02921 [Bacteroides ovatus ATCC 8483]
gi|156109966|gb|EDO11711.1| TIGR00730 family protein [Bacteroides ovatus ATCC 8483]
Length = 197
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 21/134 (15%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
P+ + +Q ++L+++ RK + + + ++ALPGG GTL+E+ E
Sbjct: 70 PRFMVEQNWHHTGLTELIEVESMHERKQKMANLS--------DGIIALPGGCGTLEELLE 121
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
I+ QL G L P +++N + F+ LL+ L D + + +WK+ + E
Sbjct: 122 IITWKQL---GLYLN-PIIILNTNRFFDPLLEMLEKAID-ENFMRRQHGDIWKVAQTPEE 176
Query: 118 ALSYLAE--FYDLS 129
A+ L E +D+S
Sbjct: 177 AVQLLYETPVWDIS 190
>gi|225026564|ref|ZP_03715756.1| hypothetical protein EUBHAL_00814 [Eubacterium hallii DSM 3353]
gi|224956113|gb|EEG37322.1| TIGR00730 family protein [Eubacterium hallii DSM 3353]
Length = 199
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V PGG+GT DE F+IL L +L R P +V N FY + + G +
Sbjct: 117 AFVIAPGGIGTFDEFFQILTLTELGRSAK----PIIVYNVSGFYDDTIAIIDKLIGMGFI 172
Query: 101 AKDEVASLWKICDSNSEALSYL 122
++ V SL+ +C++ E L+ +
Sbjct: 173 -RESVKSLFSVCETPEEVLNAI 193
>gi|383790475|ref|YP_005475049.1| hypothetical protein [Spirochaeta africana DSM 8902]
gi|383107009|gb|AFG37342.1| TIGR00730 family protein [Spirochaeta africana DSM 8902]
Length = 188
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 41 AVVALPGGVGTLDEMFEIL--ALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWG 98
A +ALPGG GTL+E+FE+L A I + R P ++N +Y LLDFLG G
Sbjct: 102 AFIALPGGFGTLEELFEVLTWAAIGMHR------KPVGLLNSCEYYTPLLDFLGQSGQAG 155
Query: 99 TVAKDEVASL 108
+ D +A L
Sbjct: 156 FIRPDALALL 165
>gi|94311561|ref|YP_584771.1| hypothetical protein Rmet_2625 [Cupriavidus metallidurans CH34]
gi|430809177|ref|ZP_19436292.1| hypothetical protein D769_22954 [Cupriavidus sp. HMR-1]
gi|93355413|gb|ABF09502.1| conserved hypothetical protein (family 730) [Cupriavidus
metallidurans CH34]
gi|429498321|gb|EKZ96831.1| hypothetical protein D769_22954 [Cupriavidus sp. HMR-1]
Length = 239
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
A + +PGG GTLDE+ E+L L+Q G VP +VM F+K LLD F G
Sbjct: 140 AFIVMPGGFGTLDELAEVLTLVQ---TGKSRSVP-VVMYGSRFWKGLLDWFRFTLLPMGL 195
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYD 127
+A+ ++ L KI D E L + E+Y+
Sbjct: 196 IAEHDL-DLMKIVDEPQEVLEAVYEYYE 222
>gi|121604530|ref|YP_981859.1| hypothetical protein Pnap_1624 [Polaromonas naphthalenivorans CJ2]
gi|120593499|gb|ABM36938.1| conserved hypothetical protein 730 [Polaromonas naphthalenivorans
CJ2]
Length = 287
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE++ L+Q ++ PVP ++ + ++K+L +F E+
Sbjct: 206 ALVAFPGGFGTLDELFEVITLVQTKKAK---PVPIILFGTE-YWKRLFNFDIMIEEGAIS 261
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+D L + D A + FY+L
Sbjct: 262 PQD--LDLIQYVDEPQAAWDAIKNFYEL 287
>gi|299145182|ref|ZP_07038250.1| decarboxylase family protein [Bacteroides sp. 3_1_23]
gi|383115727|ref|ZP_09936482.1| TIGR00730 family protein [Bacteroides sp. D2]
gi|298515673|gb|EFI39554.1| decarboxylase family protein [Bacteroides sp. 3_1_23]
gi|382948227|gb|EFS31706.2| TIGR00730 family protein [Bacteroides sp. D2]
Length = 195
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 21/134 (15%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
P+ + +Q ++L+++ RK + + + ++ALPGG GTL+E+ E
Sbjct: 68 PRFMVEQNWHHTGLTELIEVESMHERKQKMANLS--------DGIIALPGGCGTLEELLE 119
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
I+ QL G L P +++N + F+ LL+ L D + + +WK+ + E
Sbjct: 120 IITWKQL---GLYLN-PIIILNTNRFFDPLLEMLEKAID-ENFMRRQHGDIWKVAQTPEE 174
Query: 118 ALSYLAE--FYDLS 129
A+ L E +D+S
Sbjct: 175 AVQLLYETPVWDIS 188
>gi|134094459|ref|YP_001099534.1| signal peptide [Herminiimonas arsenicoxydans]
gi|133738362|emb|CAL61407.1| putative lysine decarboxylase [Herminiimonas arsenicoxydans]
Length = 198
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 43 VALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAK 102
+A+PGG+GTL+E+FE+L QL E PV V+N D FY L+ FL + G V
Sbjct: 102 IAMPGGIGTLEELFEVLTWSQLGF--HEKPVG--VLNVDGFYDGLIAFLQNQVAQGFVKA 157
Query: 103 DEVASLWKICDSNSEALSYLAEF 125
++ A+L S SE L L F
Sbjct: 158 NQ-AALMMHEKSASELLHRLQTF 179
>gi|404450152|ref|ZP_11015138.1| hypothetical protein A33Q_12535 [Indibacter alkaliphilus LW1]
gi|403764351|gb|EJZ25256.1| hypothetical protein A33Q_12535 [Indibacter alkaliphilus LW1]
Length = 252
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V +PGG GTLDE FE L LIQ ++ PV V+ F++ L D++ ++GT+
Sbjct: 149 AFVVMPGGFGTLDEFFEALTLIQT-KVMRRFPV---VLMCSDFHEHLFDYIQHLAEYGTI 204
Query: 101 AKDEVASLWKICDSNSEALSYLAEF 125
K ++ L+ + DS E +++ ++
Sbjct: 205 DKKDL-DLFLLTDSIEEMENHIRKY 228
>gi|424851411|ref|ZP_18275808.1| lysine decarboxylase [Rhodococcus opacus PD630]
gi|356666076|gb|EHI46147.1| lysine decarboxylase [Rhodococcus opacus PD630]
Length = 266
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 14/106 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + A + LPGG GTLDE+FE L L+Q ++ + P+
Sbjct: 152 INFRYFFARKTMFVKYS--------QAFICLPGGFGTLDELFEALTLVQTRKV-TRFPI- 201
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEAL 119
V+ ++ L+D+L G + G +++ +V +L + DS EA+
Sbjct: 202 --VLFGTEYWSGLVDWLRGTLQRSGKISEGDV-NLLHVTDSVEEAV 244
>gi|294644394|ref|ZP_06722157.1| conserved hypothetical protein TIGR00730 [Bacteroides ovatus SD CC
2a]
gi|294810231|ref|ZP_06768896.1| conserved hypothetical protein TIGR00730 [Bacteroides xylanisolvens
SD CC 1b]
gi|345510858|ref|ZP_08790418.1| hypothetical protein BSAG_00382 [Bacteroides sp. D1]
gi|423290858|ref|ZP_17269707.1| TIGR00730 family protein [Bacteroides ovatus CL02T12C04]
gi|423293860|ref|ZP_17271987.1| TIGR00730 family protein [Bacteroides ovatus CL03T12C18]
gi|292640229|gb|EFF58484.1| conserved hypothetical protein TIGR00730 [Bacteroides ovatus SD CC
2a]
gi|294442588|gb|EFG11390.1| conserved hypothetical protein TIGR00730 [Bacteroides xylanisolvens
SD CC 1b]
gi|345454324|gb|EEO48672.2| hypothetical protein BSAG_00382 [Bacteroides sp. D1]
gi|392664723|gb|EIY58260.1| TIGR00730 family protein [Bacteroides ovatus CL02T12C04]
gi|392677818|gb|EIY71234.1| TIGR00730 family protein [Bacteroides ovatus CL03T12C18]
Length = 195
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 21/134 (15%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
P+ + +Q ++L+++ RK + + + ++ALPGG GTL+E+ E
Sbjct: 68 PRFMVEQNWHHTGLTELIEVESMHERKQKMANLS--------DGIIALPGGCGTLEELLE 119
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
I+ QL G L P +++N + F+ LL+ L D + + +WK+ + E
Sbjct: 120 IITWKQL---GLYLN-PIIILNTNRFFDPLLEMLEKAID-ENFMRRQHGDIWKVAQTPEE 174
Query: 118 ALSYLAE--FYDLS 129
A+ L E +D+S
Sbjct: 175 AVQLLYETPVWDIS 188
>gi|187735994|ref|YP_001878106.1| hypothetical protein Amuc_1504 [Akkermansia muciniphila ATCC
BAA-835]
gi|187426046|gb|ACD05325.1| conserved hypothetical protein [Akkermansia muciniphila ATCC
BAA-835]
Length = 352
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Query: 7 LCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLER 66
+ +L++ +F RK + + A+VA PGG GT+DE+FE L LIQ +
Sbjct: 145 VVAHSDKLINFYYFFVRKLNFV--------AESDAMVAFPGGFGTMDEVFETLTLIQTGK 196
Query: 67 IGSELPVPFLVMNYDSFYKKLLDFLG-DCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
+ P+ L +F+ L F+ + D G ++ D++ L + + +EA+ ++ F
Sbjct: 197 -ATIYPIVLLDSPGKTFWLNWLAFIRVELVDSGLISADDL-HLIHVTKNPAEAMEHIDRF 254
Query: 126 YDL 128
Y +
Sbjct: 255 YRI 257
>gi|149194630|ref|ZP_01871726.1| Predicted Rossmann fold nucleotide-binding protein [Caminibacter
mediatlanticus TB-2]
gi|149135374|gb|EDM23854.1| Predicted Rossmann fold nucleotide-binding protein [Caminibacter
mediatlanticus TB-2]
Length = 292
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 14/112 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+F+ RK ++ A+ A+V PGG GTLDE+FE L LIQ R ++PV
Sbjct: 189 QFHYFATRKMHFLERAI--------ALVVFPGGFGTLDELFETLTLIQT-RKNKKIPV-- 237
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
V+ +++KL++F G + KD++ +++ ++ +A Y+ +Y+
Sbjct: 238 -VLIGKEYWQKLINFEMLVSH-GMIDKDDL-NIFVYKENAKDAFEYIKNWYE 286
>gi|386284308|ref|ZP_10061530.1| hypothetical protein SULAR_03637 [Sulfurovum sp. AR]
gi|385344593|gb|EIF51307.1| hypothetical protein SULAR_03637 [Sulfurovum sp. AR]
Length = 290
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 12/74 (16%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R+F+ RK + A A+V PGG GT+DE+FE+L LIQ ++ P+P +
Sbjct: 187 FRYFAMRKLHFMQRA--------KALVVFPGGFGTMDELFEVLTLIQTKKTP---PIPII 235
Query: 77 VMNYDSFYKKLLDF 90
++ + ++ +++DF
Sbjct: 236 LLGKE-YWNRMIDF 248
>gi|194337404|ref|YP_002019198.1| hypothetical protein Ppha_2390 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194309881|gb|ACF44581.1| conserved hypothetical protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 245
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 13/115 (11%)
Query: 13 QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELP 72
+LV ++F RK + A A +ALPGG GTLDE+ E + LIQ + P
Sbjct: 135 KLVSFQYFFVRKVMFMKYA--------QAFIALPGGFGTLDEVMEAITLIQTGK-SERFP 185
Query: 73 VPFLVMNY-DSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
V + +Y + FY+ + + + C D G + D++ ++ + DS E ++ + FY
Sbjct: 186 VILVGRSYWEGFYRWIEESM--CRDKGYIHADDLGFIY-LEDSPDEVIAIIKRFY 237
>gi|237720663|ref|ZP_04551144.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|262405666|ref|ZP_06082216.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|229450414|gb|EEO56205.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|262356541|gb|EEZ05631.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
Length = 196
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 21/134 (15%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
P+ + +Q ++L+++ RK + + + ++ALPGG GTL+E+ E
Sbjct: 69 PRFMVEQNWHHTGLTELIEVESMHERKQKMANLS--------DGIIALPGGCGTLEELLE 120
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
I+ QL G L P +++N + F+ LL+ L D + + +WK+ + E
Sbjct: 121 IITWKQL---GLYLN-PIIILNTNRFFDPLLEMLEKAID-ENFMRRQHGDIWKVAQTPEE 175
Query: 118 ALSYLAE--FYDLS 129
A+ L E +D+S
Sbjct: 176 AVQLLYETPVWDIS 189
>gi|332188559|ref|ZP_08390278.1| putative lysine decarboxylase family protein [Sphingomonas sp. S17]
gi|332011403|gb|EGI53489.1| putative lysine decarboxylase family protein [Sphingomonas sp. S17]
Length = 295
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ A PGG GT DE+FE+L LIQ +I P+P L+ +F++++++F E+ G V
Sbjct: 205 ALAAFPGGFGTFDELFELLTLIQTGKIQ---PIPVLLFG-RAFWERVVNFEALVEE-GVV 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
++ ++ ++ ++ EA + FY+
Sbjct: 260 SERDLG-IFTYVETAEEAWDVVRNFYE 285
>gi|221635783|ref|YP_002523659.1| hypothetical protein trd_A0376 [Thermomicrobium roseum DSM 5159]
gi|221158083|gb|ACM07201.1| conserved hypothetical protein [Thermomicrobium roseum DSM 5159]
Length = 201
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
P+VL +E ++L +R RK A+ +D D VALPGG GTLDE+FE
Sbjct: 72 PEVLMAREFAHPNLTRLHIVRTMHERK------ALMSDLAD--GFVALPGGFGTLDELFE 123
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
I+ QL I ++ P +++N +Y+ LL + D G +A + A L + D E
Sbjct: 124 IVTWAQLG-IHTK---PVVLLNSSDYYRHLLASVRHAIDEGFIAPEH-AGLLIVTDDPEE 178
Query: 118 ALSYLAEFYDLSSIDK 133
A+ L + ++ +
Sbjct: 179 AVEALLTYQPPIAVPR 194
>gi|198274132|ref|ZP_03206664.1| hypothetical protein BACPLE_00269 [Bacteroides plebeius DSM 17135]
gi|198273210|gb|EDY97479.1| TIGR00730 family protein [Bacteroides plebeius DSM 17135]
Length = 209
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
V+ALPGG GTL+E+ EI+ QL G L P +++N + FY LL+ L +
Sbjct: 117 GVIALPGGCGTLEELLEIITWKQL---GLYLK-PIVILNTNGFYNPLLEMLQQAISQNFM 172
Query: 101 AKDEVASLWKICDSNSEALSYL 122
K+ ++W + + EA++ L
Sbjct: 173 RKEH-GNIWHVAQTPEEAVNLL 193
>gi|296113062|ref|YP_003627000.1| putative lysine decarboxylase [Moraxella catarrhalis RH4]
gi|416158146|ref|ZP_11605585.1| putative lysine decarboxylase [Moraxella catarrhalis 101P30B1]
gi|416217689|ref|ZP_11624422.1| putative lysine decarboxylase [Moraxella catarrhalis 7169]
gi|416225037|ref|ZP_11626777.1| putative lysine decarboxylase [Moraxella catarrhalis 103P14B1]
gi|416229458|ref|ZP_11628055.1| putative lysine decarboxylase [Moraxella catarrhalis 46P47B1]
gi|416235898|ref|ZP_11630367.1| putative lysine decarboxylase [Moraxella catarrhalis 12P80B1]
gi|416240507|ref|ZP_11632478.1| putative lysine decarboxylase [Moraxella catarrhalis BC1]
gi|416242582|ref|ZP_11633618.1| putative lysine decarboxylase [Moraxella catarrhalis BC7]
gi|416246670|ref|ZP_11635128.1| putative lysine decarboxylase [Moraxella catarrhalis BC8]
gi|416249474|ref|ZP_11636571.1| putative lysine decarboxylase [Moraxella catarrhalis CO72]
gi|416254804|ref|ZP_11638906.1| putative lysine decarboxylase [Moraxella catarrhalis O35E]
gi|421779888|ref|ZP_16216378.1| putative lysine decarboxylase [Moraxella catarrhalis RH4]
gi|295920756|gb|ADG61107.1| putative lysine decarboxylase [Moraxella catarrhalis BBH18]
gi|326560438|gb|EGE10820.1| putative lysine decarboxylase [Moraxella catarrhalis 7169]
gi|326561642|gb|EGE11979.1| putative lysine decarboxylase [Moraxella catarrhalis 103P14B1]
gi|326562605|gb|EGE12916.1| putative lysine decarboxylase [Moraxella catarrhalis 46P47B1]
gi|326563585|gb|EGE13839.1| putative lysine decarboxylase [Moraxella catarrhalis 12P80B1]
gi|326565827|gb|EGE15989.1| putative lysine decarboxylase [Moraxella catarrhalis BC1]
gi|326570482|gb|EGE20522.1| putative lysine decarboxylase [Moraxella catarrhalis BC8]
gi|326571166|gb|EGE21190.1| putative lysine decarboxylase [Moraxella catarrhalis BC7]
gi|326573456|gb|EGE23424.1| putative lysine decarboxylase [Moraxella catarrhalis 101P30B1]
gi|326575646|gb|EGE25569.1| putative lysine decarboxylase [Moraxella catarrhalis CO72]
gi|326577110|gb|EGE27004.1| putative lysine decarboxylase [Moraxella catarrhalis O35E]
gi|407812682|gb|EKF83466.1| putative lysine decarboxylase [Moraxella catarrhalis RH4]
Length = 211
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 13/109 (11%)
Query: 25 HGLIDCAVRNDSCDRT--------AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
HGL + + D R A +ALPGG+GT +E+FE+++L QL + P
Sbjct: 82 HGLSELIITEDMASRKLKMISLADAFIALPGGIGTYEELFEVMSLAQLRQHAK----PIG 137
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
V+N D F+ L L G + + +L + D+ L+ +A +
Sbjct: 138 VLNVDGFFNPFLKLLEQTAKAGFMPVSNI-NLICVADNIPTLLTKMATY 185
>gi|222839671|gb|EEE77994.1| predicted protein [Populus trichocarpa]
Length = 315
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
A + +PGG GTLDE+ E+L L+Q G VP +VM F+K LLD F G
Sbjct: 216 AFIVMPGGFGTLDELAEVLTLVQ---TGKSRSVP-VVMYGSRFWKGLLDWFRFTLLPMGL 271
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYD 127
+A+ ++ L KI D E L + E+Y+
Sbjct: 272 IAEHDL-DLMKIVDEPQEVLEAVYEYYE 298
>gi|330824333|ref|YP_004387636.1| hypothetical protein Alide2_1731 [Alicycliphilus denitrificans
K601]
gi|329309705|gb|AEB84120.1| Conserved hypothetical protein CHP00730 [Alicycliphilus
denitrificans K601]
Length = 288
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
+VA PGG GTLDE+FE+L LIQ ++ +PV V+ +F+++++DF D G V
Sbjct: 199 GLVAFPGGYGTLDELFEVLTLIQTRKM-QRVPV---VLVGRAFWRRVVDF-DLLLDEGYV 253
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+ ++ L+ D E +S L FY
Sbjct: 254 SSSDL-DLFTCVDDAEEIVSALERFY 278
>gi|124009465|ref|ZP_01694141.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123984914|gb|EAY24877.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 248
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 27/122 (22%)
Query: 13 QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELP 72
++++ +F RK + A V +PGG+GTLDE+FE + LIQ ++IG
Sbjct: 137 KVINFDYFFVRKVMFVKYA--------QGFVVMPGGMGTLDELFEAITLIQTKKIGK--- 185
Query: 73 VPFLVMNYDSFYKKLLDFLGDCEDW--GTVAKD------EVASLWKICDSNSEALSYLAE 124
F ++ +DS Y G DW TVA+ E L+ + D EA+ + E
Sbjct: 186 --FPIILFDSSY------WGGLVDWLKSTVAQKAHNINIEDLDLFTLVDDVDEAVQAIDE 237
Query: 125 FY 126
FY
Sbjct: 238 FY 239
>gi|389796380|ref|ZP_10199435.1| hypothetical protein UUC_01682 [Rhodanobacter sp. 116-2]
gi|388448599|gb|EIM04580.1| hypothetical protein UUC_01682 [Rhodanobacter sp. 116-2]
Length = 284
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE+L L+Q ++ LP+ V+ +F+++ D E
Sbjct: 199 ALVAFPGGFGTLDELFEVLTLVQTGKM-PRLPI---VLVGSTFWRRACDLAFLIEQGMLD 254
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
+D A L + ++ +A++ + FYD
Sbjct: 255 PRD--AELLSVVENAEQAVAAMHAFYD 279
>gi|404423662|ref|ZP_11005295.1| hypothetical protein MFORT_24297 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403653461|gb|EJZ08440.1| hypothetical protein MFORT_24297 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 245
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A A V LPGG GTLDE+FE L L+Q ++ +E P+
Sbjct: 145 INFRYFFVRKTMFVKYA--------QAFVCLPGGFGTLDELFEALTLVQTHKV-TEFPII 195
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
L ++Y + L+D++ + G + +L DS +EA+ +
Sbjct: 196 LLGVDY---WSGLIDWIRNTMLRGGKISESDLALLHCTDSVAEAVELI 240
>gi|410629749|ref|ZP_11340445.1| hypothetical protein GARC_0330 [Glaciecola arctica BSs20135]
gi|410150673|dbj|GAC17312.1| hypothetical protein GARC_0330 [Glaciecola arctica BSs20135]
Length = 317
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 6/55 (10%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKL--LDFLGD 93
A+VA PGG GTLDEMFE L LIQ +I P+P +++ F+KK +DFL D
Sbjct: 229 ALVAFPGGYGTLDEMFETLTLIQTRKIA---PMPVVLVG-KKFWKKAVNMDFLVD 279
>gi|15805498|ref|NP_294194.1| hypothetical protein DR_0471 [Deinococcus radiodurans R1]
gi|6458157|gb|AAF10050.1|AE001906_6 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 256
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 14/119 (11%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ +F ARK L A A VA PGG GTLDEM EIL L+Q ++ PVP
Sbjct: 132 LEFEYFHARKVMLARYA--------HAFVAFPGGFGTLDEMMEILTLVQTRKM---RPVP 180
Query: 75 FLVMNYDSFYKKLLD-FLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSID 132
+ ++ ++ L++ F + G +A D++ L+K+ D S+ + + ++D + D
Sbjct: 181 IYFVG-EAHWRGLVEWFRTSLVENGAIAADDL-KLFKLVDDVSQIPADVRAYHDPGAGD 237
>gi|38233578|ref|NP_939345.1| hypothetical protein DIP0983 [Corynebacterium diphtheriae NCTC
13129]
gi|375292829|ref|YP_005127368.1| hypothetical protein CDB402_0859 [Corynebacterium diphtheriae INCA
402]
gi|376242577|ref|YP_005133429.1| hypothetical protein CDCE8392_0888 [Corynebacterium diphtheriae
CDCE 8392]
gi|376248264|ref|YP_005140208.1| hypothetical protein CDHC04_0897 [Corynebacterium diphtheriae HC04]
gi|376251055|ref|YP_005137936.1| hypothetical protein CDHC03_0887 [Corynebacterium diphtheriae HC03]
gi|376256872|ref|YP_005144763.1| hypothetical protein CDVA01_0854 [Corynebacterium diphtheriae VA01]
gi|376287478|ref|YP_005160044.1| hypothetical protein CDBH8_0952 [Corynebacterium diphtheriae BH8]
gi|376290099|ref|YP_005162346.1| hypothetical protein CDC7B_0896 [Corynebacterium diphtheriae C7
(beta)]
gi|376292999|ref|YP_005164673.1| hypothetical protein CDHC02_0890 [Corynebacterium diphtheriae HC02]
gi|419860559|ref|ZP_14383200.1| hypothetical protein W5M_04486 [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
gi|38199838|emb|CAE49501.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
gi|371582500|gb|AEX46166.1| hypothetical protein CDB402_0859 [Corynebacterium diphtheriae INCA
402]
gi|371584812|gb|AEX48477.1| hypothetical protein CDBH8_0952 [Corynebacterium diphtheriae BH8]
gi|372103495|gb|AEX67092.1| hypothetical protein CDC7B_0896 [Corynebacterium diphtheriae C7
(beta)]
gi|372105819|gb|AEX71881.1| hypothetical protein CDCE8392_0888 [Corynebacterium diphtheriae
CDCE 8392]
gi|372110322|gb|AEX76382.1| hypothetical protein CDHC02_0890 [Corynebacterium diphtheriae HC02]
gi|372112559|gb|AEX78618.1| hypothetical protein CDHC03_0887 [Corynebacterium diphtheriae HC03]
gi|372114832|gb|AEX80890.1| hypothetical protein CDHC04_0897 [Corynebacterium diphtheriae HC04]
gi|372119389|gb|AEX83123.1| hypothetical protein CDVA01_0854 [Corynebacterium diphtheriae VA01]
gi|387982953|gb|EIK56452.1| hypothetical protein W5M_04486 [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
Length = 254
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R+F ARK + + A V LPGG+GTLDE+FE+L ++Q ++ + P+
Sbjct: 149 FRYFFARKTMFLKYS--------QAFVCLPGGMGTLDELFEVLCMVQTGKV-TNFPI--- 196
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
V+ SF+ L+D++ + +E SL+ + DS EA+ ++ +
Sbjct: 197 VLLGTSFWGGLVDWIKQRLVGEGMISEEDLSLFLVTDSVDEAVEFIRQ 244
>gi|376284485|ref|YP_005157695.1| hypothetical protein CD31A_0989 [Corynebacterium diphtheriae 31A]
gi|371578000|gb|AEX41668.1| hypothetical protein CD31A_0989 [Corynebacterium diphtheriae 31A]
Length = 254
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R+F ARK + + A V LPGG+GTLDE+FE+L ++Q ++ + P+
Sbjct: 149 FRYFFARKTMFLKYS--------QAFVCLPGGMGTLDELFEVLCMVQTGKV-TNFPI--- 196
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
V+ SF+ L+D++ + +E SL+ + DS EA+ ++ +
Sbjct: 197 VLLGTSFWGGLVDWIKQRLVGEGMISEEDLSLFLVTDSVDEAVEFIRQ 244
>gi|401400995|ref|XP_003880907.1| hypothetical protein NCLIV_039490 [Neospora caninum Liverpool]
gi|325115319|emb|CBZ50874.1| hypothetical protein NCLIV_039490 [Neospora caninum Liverpool]
Length = 361
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ ++ ARK +++ A+ V+A PGG GTLDE+ E++AL Q ++ ++P+
Sbjct: 242 EFQYLFARKFWMVNTAL--------GVIAAPGGFGTLDELMEVIALKQTNKLKRDIPIVL 293
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
L Y + +++F E +GT+ K + L+ + D A Y+ F
Sbjct: 294 LGKTY---WTSIINFDKMVE-FGTINKKDCDQLF-LTDDEDVAFEYIRSF 338
>gi|375106311|ref|ZP_09752572.1| TIGR00730 family protein [Burkholderiales bacterium JOSHI_001]
gi|374667042|gb|EHR71827.1| TIGR00730 family protein [Burkholderiales bacterium JOSHI_001]
Length = 195
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A VALPGG+GTL+E+FE+ + L G P +++ + FY+ LL FL + G V
Sbjct: 105 AFVALPGGIGTLEELFEVWSWRHLGYHGK----PLALLDVEGFYQPLLGFLQHTQAEGFV 160
Query: 101 AKDEVASL 108
+ ++ A L
Sbjct: 161 SAEQQAML 168
>gi|407777075|ref|ZP_11124346.1| hypothetical protein NA2_03867 [Nitratireductor pacificus pht-3B]
gi|407301240|gb|EKF20361.1| hypothetical protein NA2_03867 [Nitratireductor pacificus pht-3B]
Length = 205
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 21/106 (19%)
Query: 4 PKVLCKQESQLVDLRFF---------SARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDE 54
PK L ++E+ V+L RKH + D R+D A VALPGG+GTL+E
Sbjct: 71 PKFLIRKEATEVELTRLDELVVTDDMHQRKHLMFD---RSD-----AFVALPGGIGTLEE 122
Query: 55 MFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
+ EI+ QL R E P+ F N F+ LL + D G V
Sbjct: 123 IVEIMTWAQLAR--HEKPIVF--ANISGFWNPLLTLIQHMRDEGFV 164
>gi|338213225|ref|YP_004657280.1| hypothetical protein [Runella slithyformis DSM 19594]
gi|336307046|gb|AEI50148.1| Conserved hypothetical protein CHP00730 [Runella slithyformis DSM
19594]
Length = 249
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 13/111 (11%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
+ V +++F RK L+ + A V +PGGVGT+DE FE L LIQ I +
Sbjct: 128 QKWVKIKYFFVRKVLLVKYSY--------AFVIMPGGVGTMDEFFETLTLIQTGVIQN-- 177
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
P +V+ +Y ++ L D GT++ ++ L K D EA+ ++
Sbjct: 178 -FPLVVIG-KEYYTPMISMLQKMADQGTISPKDM-DLLKFTDDIDEAIEHI 225
>gi|421747663|ref|ZP_16185350.1| hypothetical protein B551_13403 [Cupriavidus necator HPC(L)]
gi|409773695|gb|EKN55443.1| hypothetical protein B551_13403 [Cupriavidus necator HPC(L)]
Length = 194
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 37 CDRT-AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCE 95
DR A VA+PGG+GT +E+FE +QL P V+N FY ++ FL
Sbjct: 95 ADRADAFVAMPGGIGTYEELFETFTWLQLGYHAK----PVGVLNVAGFYDGMIGFLRHAV 150
Query: 96 DWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
G + K E A L ++ D+ LS LA L +DK
Sbjct: 151 GEGFL-KPEHAGLLRVADTPDGILSSLANVPQL-RVDK 186
>gi|152990674|ref|YP_001356396.1| decarboxylase family protein [Nitratiruptor sp. SB155-2]
gi|151422535|dbj|BAF70039.1| decarboxylase family protein [Nitratiruptor sp. SB155-2]
Length = 306
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDE+FE L LIQ + P+P +++ + ++ KL++F D GT+
Sbjct: 212 ALVVFPGGFGTLDELFETLTLIQTHK---NRPIPVVLVGKE-YWHKLINF-KFLVDEGTI 266
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSID 132
+++ ++ ++ EA Y+ +Y+ +D
Sbjct: 267 EPEDL-HIFTFKENAQEAWEYILGWYEKRGLD 297
>gi|313669246|ref|YP_004049530.1| hypothetical protein NLA_19800 [Neisseria lactamica 020-06]
gi|313006708|emb|CBN88178.1| conserved hypothetical protein [Neisseria lactamica 020-06]
Length = 210
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A + +PGG GTLDE+FEIL L+Q ++ P P +++ +F+ L +++ +
Sbjct: 125 AYIVMPGGFGTLDELFEILTLVQTGKV---PPRPVVLVG-KAFWSGLAEWINAQLLARGL 180
Query: 101 AKDEVASLWKICDSNSEALSYLAE 124
+ ASL+ I D E ++YL+E
Sbjct: 181 ISEGAASLFAISDDEDEIVAYLSE 204
>gi|22299373|ref|NP_682620.1| hypothetical protein tll1830 [Thermosynechococcus elongatus BP-1]
gi|22295556|dbj|BAC09382.1| tll1830 [Thermosynechococcus elongatus BP-1]
Length = 362
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+ +L+ ++F RK L+ + A+ PGG GT DE FE L L Q G
Sbjct: 150 DPRLIHFKYFFTRKLFLLK--------ETDAIAVFPGGFGTQDEAFECLTLCQ---TGKA 198
Query: 71 LPVPFLVMNYD--SFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
P P +M+ ++++ F+ + + E L++IC S E L+YL+ FY
Sbjct: 199 PPKPLALMDVPGGTYWQHWDRFIREELAAKGLINAEDQELYRICTSVDEGLAYLSGFY 256
>gi|392376189|ref|YP_003208022.1| hypothetical protein DAMO_3150 [Candidatus Methylomirabilis
oxyfera]
gi|258593882|emb|CBE70223.1| conserved protein of unknown function [Candidatus Methylomirabilis
oxyfera]
Length = 221
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 14/112 (12%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
+ LV+ + F RK + ++ A V LPGG GTLDE+FE + LIQ +I
Sbjct: 112 TNLVNFQHFFVRKVMFVKHSI--------AFVILPGGFGTLDELFESITLIQTRKIK--- 160
Query: 72 PVPFLVMNYDSFYKKLLDFLGDC-EDWGTVAKDEVASLWKICDSNSEALSYL 122
P P +++ D +++ L ++L D G ++ D++A L K+ S E + +
Sbjct: 161 PFP-VILTDDDYWRGLQEWLRDTVMSEGKISPDDLA-LLKVAHSPEEVIQVI 210
>gi|376254049|ref|YP_005142508.1| hypothetical protein CDPW8_0947 [Corynebacterium diphtheriae PW8]
gi|372117133|gb|AEX69603.1| hypothetical protein CDPW8_0947 [Corynebacterium diphtheriae PW8]
Length = 254
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R+F ARK + + A V LPGG+GTLDE+FE+L ++Q ++ + P+
Sbjct: 149 FRYFFARKTMFLKYS--------QAFVCLPGGMGTLDELFEVLCMVQTGKV-TTFPI--- 196
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
V+ SF+ L+D++ + +E SL+ + DS EA+ ++ +
Sbjct: 197 VLLGTSFWGGLVDWIKQRLVGEGMISEEDLSLFLVTDSVDEAVEFIRQ 244
>gi|227536713|ref|ZP_03966762.1| Rossmann fold nucleotide-binding protein [Sphingobacterium
spiritivorum ATCC 33300]
gi|300773401|ref|ZP_07083270.1| methionyl-tRNA formyltransferase [Sphingobacterium spiritivorum
ATCC 33861]
gi|227243514|gb|EEI93529.1| Rossmann fold nucleotide-binding protein [Sphingobacterium
spiritivorum ATCC 33300]
gi|300759572|gb|EFK56399.1| methionyl-tRNA formyltransferase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 233
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 13 QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELP 72
+L++ +F RK + + + +PGG GT+DE+FE + LIQ +I + P
Sbjct: 123 KLLEFNYFFVRKVMFMKYS--------QGYIVMPGGFGTMDELFEAITLIQTGKI-ARFP 173
Query: 73 VPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+ V+ ++ L+D++ + +E L+++ DS +A ++ FYD
Sbjct: 174 I---VLVGSEYWGGLIDWVQNTMLGNAYISEEDLKLYRVVDSAEDAAEHIFRFYD 225
>gi|187478879|ref|YP_786903.1| hypothetical protein BAV2389, partial [Bordetella avium 197N]
gi|115423465|emb|CAJ49999.1| conserved hypothetical protein [Bordetella avium 197N]
Length = 190
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 20/128 (15%)
Query: 13 QLVDLRF--FSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
Q + L F FS+RK A V+LPGG GTLDE+FE L LIQ ++
Sbjct: 71 QTISLSFEYFSSRKVAFF--------MHSMAYVSLPGGFGTLDELFEALTLIQTGKV--- 119
Query: 71 LPVPFLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
P P +++ + ++ L+D+LG+ D G + ++ L+ + D + + ++ +F+
Sbjct: 120 PPAPVVLVGSE-YWHGLIDWLGEQLRDQGMIGPRDL-DLFIVEDDPEKVVRHIVDFHR-- 175
Query: 130 SIDKRVHE 137
+K H+
Sbjct: 176 --NKHTHQ 181
>gi|86139442|ref|ZP_01058011.1| decarboxylase family protein [Roseobacter sp. MED193]
gi|85823945|gb|EAQ44151.1| decarboxylase family protein [Roseobacter sp. MED193]
Length = 282
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 16/104 (15%)
Query: 16 DLRFFSARK-HGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ +F+ RK H L+ A A+ PGG GTLDE+FE L LIQ R+ VP
Sbjct: 173 NFHYFAIRKMHFLMRAA---------AITVFPGGFGTLDELFESLTLIQTGRMER---VP 220
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEA 118
F++ +F++K++++ D GT++ D+ L+K ++ EA
Sbjct: 221 FILFGR-AFWEKIINWEA-LADAGTIS-DQDLELFKFVETAEEA 261
>gi|56698166|ref|YP_168538.1| decarboxylase [Ruegeria pomeroyi DSS-3]
gi|56679903|gb|AAV96569.1| decarboxylase family protein [Ruegeria pomeroyi DSS-3]
Length = 291
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE+FE L LIQ R+ VPFL+ + F+++++++ D GT+
Sbjct: 201 AITIFPGGFGTLDELFESLTLIQTGRMER---VPFLLFGRE-FWERVINWRA-LADAGTI 255
Query: 101 AKDEVASLWKICDSNSEALSYL 122
+ +++ L++ D+ EA+ +
Sbjct: 256 SAEDL-DLFRFVDTAQEAVEII 276
>gi|161870780|ref|YP_001599953.1| hypothetical protein NMCC_1862 [Neisseria meningitidis 053442]
gi|161596333|gb|ABX73993.1| conserved hypothetical protein [Neisseria meningitidis 053442]
Length = 204
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V +PGG GTLDE+FEIL L+Q ++ P P +++ +F+ L +++ +
Sbjct: 119 AYVVMPGGFGTLDELFEILTLVQTGKV---PPRPIVLVG-KAFWSGLAEWINAQLLARGL 174
Query: 101 AKDEVASLWKICDSNSEALSYLAE 124
+ ASL+ I D E + YL+E
Sbjct: 175 ISEGAASLFAISDDEDEIVEYLSE 198
>gi|440694244|ref|ZP_20876877.1| TIGR00730 family protein [Streptomyces turgidiscabies Car8]
gi|440283775|gb|ELP70988.1| TIGR00730 family protein [Streptomyces turgidiscabies Car8]
Length = 529
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A VALPGG+GT +E+ E+LA QL RI + P L+++ FY+ LL FL D G +
Sbjct: 102 AFVALPGGLGTAEELLEVLAWAQL-RIHHK---PCLLLDPYGFYRPLLAFLEHARDEGFL 157
Query: 101 AKDEVASLWKICDSNSEALSYL 122
++ + +C+S E ++ L
Sbjct: 158 HPGDLERI-VVCESAEEVVAQL 178
>gi|406573182|ref|ZP_11048936.1| hypothetical protein B277_00050 [Janibacter hoylei PVAS-1]
gi|404557356|gb|EKA62804.1| hypothetical protein B277_00050 [Janibacter hoylei PVAS-1]
Length = 260
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 14/109 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + V LPGG GTLDE+FE + L Q ++ S P
Sbjct: 149 INFRYFFARKTMFVKYS--------EGFVVLPGGFGTLDEVFEAVTLAQTGKVTS---FP 197
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
+++ D ++ L+D+L G G ++ D++ L+ + D +EA+ Y+
Sbjct: 198 IVLIGVD-YWAGLIDWLRGSVLGGGMISPDDIDRLY-VTDDLTEAVEYV 244
>gi|389805694|ref|ZP_10202841.1| hypothetical protein UUA_00595 [Rhodanobacter thiooxydans LCS2]
gi|388446935|gb|EIM02949.1| hypothetical protein UUA_00595 [Rhodanobacter thiooxydans LCS2]
Length = 284
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE+L L+Q ++ LP+ V+ ++F+++ D E
Sbjct: 199 ALVAFPGGFGTLDELFEVLTLVQTGKM-PRLPI---VLVGNAFWRRACDLEFLLEQGMIN 254
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
A D A L+ + ++ +A++ + FY
Sbjct: 255 AGD--AELFSVVENAEQAVATMHAFY 278
>gi|315655712|ref|ZP_07908610.1| methionyl-tRNA formyltransferase [Mobiluncus curtisii ATCC 51333]
gi|315489776|gb|EFU79403.1| methionyl-tRNA formyltransferase [Mobiluncus curtisii ATCC 51333]
Length = 269
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 14/109 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
VD R+F RK + A A VALPGG GTLDE+FE + L Q +I P
Sbjct: 166 VDFRYFFVRKTMFVKYA--------QAFVALPGGFGTLDELFECVTLRQTSKIQQ---YP 214
Query: 75 FLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALSYL 122
+++ +D F+ LL ++ G V+ DEV + ++ ++ +EAL+ +
Sbjct: 215 IVLVGHD-FWDGLLGWVRQHLVAEGMVSPDEV-DIIQVVETAAEALAAI 261
>gi|163744980|ref|ZP_02152340.1| hypothetical protein OIHEL45_05315 [Oceanibulbus indolifex HEL-45]
gi|161381798|gb|EDQ06207.1| hypothetical protein OIHEL45_05315 [Oceanibulbus indolifex HEL-45]
Length = 287
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GT+DE+FE L LIQ R+ VPFL+ + F++K++++ D GT+
Sbjct: 190 AICVFPGGFGTMDELFEALTLIQTGRMNR---VPFLLFGRE-FWEKIINWDA-LADAGTI 244
Query: 101 AKDEVASLWKICDSNSEALSYL 122
+ +++ L++ +S EA+ +
Sbjct: 245 SAEDL-DLFRFVESADEAMEVI 265
>gi|390942277|ref|YP_006406038.1| hypothetical protein Belba_0628 [Belliella baltica DSM 15883]
gi|390415705|gb|AFL83283.1| TIGR00730 family protein [Belliella baltica DSM 15883]
Length = 190
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 43 VALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLG-DCED 96
VA+PGG+GT +E+FEI+ L QL I P + N + +Y KL+DFL CE+
Sbjct: 102 VAMPGGIGTFEELFEIMTLNQLGYIRK----PLALYNVNGYYDKLIDFLKFSCEE 152
>gi|269955777|ref|YP_003325566.1| hypothetical protein Xcel_0977 [Xylanimonas cellulosilytica DSM
15894]
gi|269304458|gb|ACZ30008.1| conserved hypothetical protein [Xylanimonas cellulosilytica DSM
15894]
Length = 268
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 14/109 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK + A + +PGG GT DE+FE L L+Q ++ + PV
Sbjct: 149 VNFRYFFARKTMFVKYA--------QGFIVMPGGFGTFDELFEALTLVQTHKV-TGFPVA 199
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
+ Y ++ LLD+L G D G V+ + L + D +EA+ ++
Sbjct: 200 LVGSEY---WQGLLDWLRGPVLDRGMVSAAD-PDLLHLTDDPAEAVKFV 244
>gi|393759236|ref|ZP_10348052.1| lysine decarboxylase [Alcaligenes faecalis subsp. faecalis NCIB
8687]
gi|393162464|gb|EJC62522.1| lysine decarboxylase [Alcaligenes faecalis subsp. faecalis NCIB
8687]
Length = 222
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGD-CEDWGT 99
A +ALPGG GTLDE+FE++ L+Q ++ P P +++ SF+ L++++GD + G
Sbjct: 130 AYIALPGGFGTLDELFEVMTLVQTGKV---PPAPIVLIG-TSFWSGLIEWIGDQLMELGL 185
Query: 100 VAKDEVASLWKICDSNSEALSYLAE 124
+ ++ +L + D E + Y+ +
Sbjct: 186 IGPKDL-NLLVLTDDLDEVMGYINQ 209
>gi|374623755|ref|ZP_09696257.1| hypothetical protein ECTPHS_12019 [Ectothiorhodospira sp. PHS-1]
gi|373942858|gb|EHQ53403.1| hypothetical protein ECTPHS_12019 [Ectothiorhodospira sp. PHS-1]
Length = 241
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D R F +RK + A +A V LPGG GTLDE+ EIL L+Q + +P+
Sbjct: 124 LDFRHFFSRKVMFVKYA--------SAYVVLPGGFGTLDELAEILTLVQTNKT-RRIPI- 173
Query: 75 FLVMNYDSFYKKLLD-FLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
++ SF++ LL+ F GT++++++ L+ + D + + FY+ ++
Sbjct: 174 --ILVGSSFWRGLLEWFETTLVTEGTISEEDL-DLYTLVDDAKSVVDAIFNFYEFGGLEP 230
Query: 134 RVHE 137
E
Sbjct: 231 TSEE 234
>gi|365827864|ref|ZP_09369704.1| hypothetical protein HMPREF0975_01487 [Actinomyces sp. oral taxon
849 str. F0330]
gi|365264674|gb|EHM94471.1| hypothetical protein HMPREF0975_01487 [Actinomyces sp. oral taxon
849 str. F0330]
Length = 251
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 14/109 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK + + V +PGG+GTLDE+FE L L+Q ++I S P+
Sbjct: 142 VNFRYFFARKTMFVKYS--------DGFVVMPGGMGTLDELFEALTLVQTQKI-SSFPIA 192
Query: 75 FLVMNYDSFYKKLLDFLGDCE-DWGTVAKDEVASLWKICDSNSEALSYL 122
+ Y + LL+++ D GT++ + L + D EA+ Y+
Sbjct: 193 LVDSGY---WGGLLEWVRTTMIDRGTISSTD-PDLLHVVDGAEEAVDYV 237
>gi|398345405|ref|ZP_10530108.1| rossmann fold nucleotide-binding protein [Leptospira inadai serovar
Lyme str. 10]
Length = 258
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
+V PGG GT+DE+FE L LIQ R ++P V+ Y Y + +G +++G +
Sbjct: 174 GIVVFPGGFGTVDELFETLTLIQTGRNNLKIP----VIMYGKKYWDQVFHIGPMKEYGLI 229
Query: 101 AKDEVASLWKICDSNSEALSYL 122
D++ +L CD +E L L
Sbjct: 230 DPDDI-NLITYCDEPNEVLEVL 250
>gi|220905294|ref|YP_002480606.1| hypothetical protein Ddes_2032 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869593|gb|ACL49928.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 222
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 15/109 (13%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ R+F RK + A+ A V +PGG+GT+DE+ E L Q R PF
Sbjct: 121 NFRYFFIRKFMFVKYAM--------AYVVMPGGMGTIDELSEAFVLAQTGRT-----RPF 167
Query: 76 LVMNYD-SFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
++ YD SF+ ++++L + G + + E+ L +CD+ E +++L
Sbjct: 168 PIVLYDSSFWSGMVEWLRKNMAGRGFINEKEIDRLITVCDTPEEVVNHL 216
>gi|345303991|ref|YP_004825893.1| hypothetical protein Rhom172_2155 [Rhodothermus marinus
SG0.5JP17-172]
gi|345113224|gb|AEN74056.1| Conserved hypothetical protein CHP00730 [Rhodothermus marinus
SG0.5JP17-172]
Length = 247
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 14/115 (12%)
Query: 13 QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELP 72
+L++ FF RK + A + LPGG GT+DE+FE L LIQ G
Sbjct: 137 KLINFDFFFVRKVMFVKYA--------QGFIVLPGGFGTMDELFEALTLIQ---TGKATR 185
Query: 73 VPFLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
P ++M D ++ LLD+L + G ++ +++ L+ + D+ EA + FY
Sbjct: 186 FPVILMGTD-YWSGLLDWLRNEMLAAGNISPEDL-ELFMLTDAPEEAAEIIETFY 238
>gi|296138888|ref|YP_003646131.1| hypothetical protein [Tsukamurella paurometabola DSM 20162]
gi|296027022|gb|ADG77792.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length = 264
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 14/106 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A A V LPGG GTLDE+FE L L+Q ++ + P+
Sbjct: 150 INFRYFFVRKTMFVKYA--------QAFVCLPGGFGTLDELFEALTLVQTHKV-TRFPI- 199
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEAL 119
V+ +++ L+D++ G + G V+ + A L + DS +EA+
Sbjct: 200 --VLLGSAYWGGLVDWIRGTLTEQGMVSPGD-ADLITVTDSVAEAI 242
>gi|260428871|ref|ZP_05782848.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260419494|gb|EEX12747.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 280
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDEMFE L LIQ R+ VPFL+ +F++K++++ ED GT+
Sbjct: 190 AICVFPGGFGTLDEMFEALTLIQTGRMER---VPFLLFGR-AFWEKIINWEA-LEDAGTI 244
Query: 101 AKDEV 105
+ +++
Sbjct: 245 SPEDL 249
>gi|452851056|ref|YP_007492740.1| conserved protein of unknown function [Desulfovibrio piezophilus]
gi|451894710|emb|CCH47589.1| conserved protein of unknown function [Desulfovibrio piezophilus]
Length = 219
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
D R+F RK I A+ A VALPGG GTLDE+ E L LIQ RI P P
Sbjct: 119 DFRYFFIRKLMFIKYAL--------AYVALPGGFGTLDELAEALVLIQTHRIK---PFP- 166
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
+V+ F+ L+D+ + A+ L+ + D E +S++ +
Sbjct: 167 IVLFGTQFWGGLVDWFKEQLVVNHFAESTDLDLFIVTDDPDEVVSHIQK 215
>gi|392420278|ref|YP_006456882.1| hypothetical protein A458_06065 [Pseudomonas stutzeri CCUG 29243]
gi|390982466|gb|AFM32459.1| hypothetical protein A458_06065 [Pseudomonas stutzeri CCUG 29243]
Length = 288
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
+VA PGG GTLDE+FE+L LIQ ++ +PV V+ +F+++++DF D G V
Sbjct: 199 GLVAFPGGYGTLDELFEVLTLIQTGKM-QRIPV---VLVGRAFWRRVVDF-DLLLDEGYV 253
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+ ++ L+ D E +S L FY
Sbjct: 254 SPSDL-DLFTCVDEAEEIVSALERFY 278
>gi|433602692|ref|YP_007035061.1| hypothetical protein BN6_08590 [Saccharothrix espanaensis DSM
44229]
gi|407880545|emb|CCH28188.1| hypothetical protein BN6_08590 [Saccharothrix espanaensis DSM
44229]
Length = 256
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK I + A + LPGG GTLDE+FE L L+Q +++ ++ PV
Sbjct: 150 VNFRYFFVRKTMFIKYS--------QAFICLPGGFGTLDELFEALTLVQTKKV-TKFPV- 199
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
V+ S+++ L D++ D G D+ L + D +A+ + E +
Sbjct: 200 --VLFGKSYWQGLYDWVKDSVMAGGKVGDKDLGLLHLTDDIDDAVRVVQEAH 249
>gi|229493850|ref|ZP_04387623.1| lysine decarboxylase family protein [Rhodococcus erythropolis
SK121]
gi|453073345|ref|ZP_21976285.1| hypothetical protein G418_30459 [Rhodococcus qingshengii BKS 20-40]
gi|226186774|dbj|BAH34878.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
gi|229319237|gb|EEN85085.1| lysine decarboxylase family protein [Rhodococcus erythropolis
SK121]
gi|452756109|gb|EME14526.1| hypothetical protein G418_30459 [Rhodococcus qingshengii BKS 20-40]
Length = 267
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 14/106 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + A + LPGG GTLDE+FE L L+Q ++ + P+
Sbjct: 153 INFRYFFARKTMFVKYS--------QAFICLPGGFGTLDELFEALTLVQTHKV-TRFPI- 202
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEAL 119
V+ ++ L+D++ G E G +++ +V +L + DS EA+
Sbjct: 203 --VLFGTEYWSGLVDWIRGTLERDGKISEGDV-NLLHVTDSVEEAV 245
>gi|335423556|ref|ZP_08552577.1| hypothetical protein SSPSH_12712 [Salinisphaera shabanensis E1L3A]
gi|334891381|gb|EGM29629.1| hypothetical protein SSPSH_12712 [Salinisphaera shabanensis E1L3A]
Length = 203
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A +A+PGG GTL+E+FE+L QL P +++ D FY+ L D LG + G V
Sbjct: 121 AFIAMPGGFGTLEELFEVLTWHQL----GWHDKPCGLLDIDGFYQPLADCLGHMQTEGFV 176
Query: 101 AKDEVASLWKICDSNS 116
+ +V + + D+ +
Sbjct: 177 SAAQVGRIQRAADAGT 192
>gi|148258939|ref|YP_001243524.1| hypothetical protein BBta_7791 [Bradyrhizobium sp. BTAi1]
gi|146411112|gb|ABQ39618.1| hypothetical protein BBta_7791 [Bradyrhizobium sp. BTAi1]
Length = 261
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 14/108 (12%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
++F+ RK + A+R + A+V PGG GTLDEMFEIL L Q +I +P L
Sbjct: 155 FQYFAIRK---MHLAMRAN-----ALVIFPGGFGTLDEMFEILTLKQTAKISQ---IPIL 203
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
+ ++ S+++ LL+ L G +A + SL+ D EA + L E
Sbjct: 204 LFDH-SYWRSLLN-LDVLVSEGMIAPQDT-SLFMFADDAEEAWALLKE 248
>gi|393719688|ref|ZP_10339615.1| hypothetical protein SechA1_08067 [Sphingomonas echinoides ATCC
14820]
Length = 312
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ A PGG GT DE+FE+L LIQ +I P+P L+ + F+ ++++F E+
Sbjct: 229 ALAAFPGGFGTFDELFELLTLIQTGKIA---PIPVLLYGRE-FWNRVVNFDALVEEGVVS 284
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
AKD ++ ++ E + FY
Sbjct: 285 AKD--LKIFTFVETAQEGWDVVKAFY 308
>gi|390451070|ref|ZP_10236652.1| hypothetical protein A33O_16779 [Nitratireductor aquibiodomus RA22]
gi|389661527|gb|EIM73136.1| hypothetical protein A33O_16779 [Nitratireductor aquibiodomus RA22]
Length = 279
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GT+DE+FE L LIQ R+ LPV V+ F++ ++ L + GT+
Sbjct: 198 AVAVFPGGFGTMDELFETLTLIQTGRM-ERLPV---VLFGKDFWEGAIN-LAFLAEQGTI 252
Query: 101 AK--DEVASLWKICDSNSEALSYLAEFYDL 128
+ DE+ + D+ EA + +AEFY+L
Sbjct: 253 SPGDDELITF---VDTAEEAWAKIAEFYEL 279
>gi|309781709|ref|ZP_07676442.1| decarboxylase [Ralstonia sp. 5_7_47FAA]
gi|308919350|gb|EFP65014.1| decarboxylase [Ralstonia sp. 5_7_47FAA]
Length = 248
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
A + +PGG GTLDE+ E+L L+Q G VP +VM F+K LLD F G
Sbjct: 149 AFIVMPGGFGTLDELAEVLTLVQ---TGKSRSVP-VVMFGSHFWKGLLDWFRFTLLPMGL 204
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYD 127
+A+ ++ + +I D +AL + EFY+
Sbjct: 205 IAEHDL-DIMRIVDEPKDALDAVYEFYE 231
>gi|261378501|ref|ZP_05983074.1| methionyl-tRNA formyltransferase [Neisseria cinerea ATCC 14685]
gi|269145045|gb|EEZ71463.1| methionyl-tRNA formyltransferase [Neisseria cinerea ATCC 14685]
Length = 210
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V +PGG GTLDE+FEIL L+Q ++ P P +V+ +F+ L +++ +
Sbjct: 125 AYVVMPGGFGTLDELFEILTLVQTGKV---PPRP-VVLFGKAFWSGLAEWIKAQLLARGL 180
Query: 101 AKDEVASLWKICDSNSEALSYLAE 124
+ ASL+ I D E ++YL+E
Sbjct: 181 ISEGAASLFAISDDEDEIVAYLSE 204
>gi|443322006|ref|ZP_21051042.1| putative Rossmann fold nucleotide-binding protein [Gloeocapsa sp.
PCC 73106]
gi|442788306|gb|ELR98003.1| putative Rossmann fold nucleotide-binding protein [Gloeocapsa sp.
PCC 73106]
Length = 357
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 20/140 (14%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+ +L++ ++F RK + + A+ PGG GT DE FE L L Q + G
Sbjct: 153 DPKLINFKYFFTRKLFFLR--------ESDAIALFPGGFGTQDEAFETLTLCQTGKYG-- 202
Query: 71 LPVPFLVM-----NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
PVP +++ NY S + K ++ + D G V+ + SL+ I DS EA + F
Sbjct: 203 -PVPLVLVDEPGGNYWSLWHK---YICNLVDRGLVSLQD-TSLYTITDSIDEACQIVCNF 257
Query: 126 YDLSSIDKRVHEVNLKSTHG 145
Y + + V+ + + +G
Sbjct: 258 YRMYHSSRYVNNLFVMRLNG 277
>gi|419967342|ref|ZP_14483246.1| hypothetical protein WSS_A34477 [Rhodococcus opacus M213]
gi|414567292|gb|EKT78081.1| hypothetical protein WSS_A34477 [Rhodococcus opacus M213]
Length = 265
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 14/106 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + A + LPGG GTLDE+FE L L+Q ++ + P+
Sbjct: 151 INFRYFFARKTMFVKYS--------QAFICLPGGFGTLDELFEALTLVQTRKV-TRFPI- 200
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEAL 119
V+ ++ L+D+L G + G +++ +V SL + D EA+
Sbjct: 201 --VLFGTEYWSGLVDWLRGTLQRSGKISEGDV-SLLHVTDDVEEAV 243
>gi|357024220|ref|ZP_09086381.1| hypothetical protein MEA186_05951 [Mesorhizobium amorphae
CCNWGS0123]
gi|355543906|gb|EHH13021.1| hypothetical protein MEA186_05951 [Mesorhizobium amorphae
CCNWGS0123]
Length = 276
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 18/115 (15%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F+ RK + A AV PGG GT+DE FE L LIQ R+ +PV
Sbjct: 178 NFHYFAIRKMHFVMRA--------KAVAVFPGGFGTMDEFFETLTLIQTGRM-ERVPV-- 226
Query: 76 LVMNYDSFYKKL--LDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
++ SF++K LDFL + GT+ + + D+ EA ++ FY+L
Sbjct: 227 -ILFGKSFWQKAIDLDFLAEQ---GTITPGD-QDIIDFVDTADEAWGIISRFYNL 276
>gi|343084934|ref|YP_004774229.1| hypothetical protein [Cyclobacterium marinum DSM 745]
gi|342353468|gb|AEL25998.1| Conserved hypothetical protein CHP00730 [Cyclobacterium marinum DSM
745]
Length = 240
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 55/89 (61%), Gaps = 7/89 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC--EDWG 98
V LPGG GT+DE+FE L LIQ ++IG P+ V+ +++ L++++ E +
Sbjct: 149 GFVVLPGGFGTMDELFEALTLIQTKKIG-RFPI---VLVGRVYWEGLIEWIKSTMLESFE 204
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFYD 127
++K+++ L+ + D+ EA++ + EFY+
Sbjct: 205 NISKEDL-DLFVLVDTADEAVNAIDEFYN 232
>gi|357411370|ref|YP_004923106.1| hypothetical protein Sfla_2156 [Streptomyces flavogriseus ATCC
33331]
gi|320008739|gb|ADW03589.1| Conserved hypothetical protein CHP00730 [Streptomyces flavogriseus
ATCC 33331]
Length = 261
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 12/105 (11%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A V LPGG+GTLDE+FE L L+Q ++ + P+
Sbjct: 160 VNFRYFFVRKTMFVKYA--------QGFVVLPGGLGTLDELFEALTLVQTGKV-TRFPI- 209
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEAL 119
V+ +++ L+D+L D G A + L+ + D EA+
Sbjct: 210 --VLFGTAYWGGLVDWLRDTVVAGGKASEHDLMLFHVTDDVDEAV 252
>gi|194290335|ref|YP_002006242.1| hypothetical protein RALTA_A2245 [Cupriavidus taiwanensis LMG
19424]
gi|193224170|emb|CAQ70179.1| conserved hypothetical protein; putative exported protein
[Cupriavidus taiwanensis LMG 19424]
Length = 315
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
A + +PGG GTLDE+ E+L L+Q G VP ++M F+K LLD F G
Sbjct: 216 AFIVMPGGFGTLDELAEVLTLVQ---TGKSRSVP-VIMFGSRFWKGLLDWFRFTLLPMGL 271
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 135
+A+ ++ L KI D E L + ++Y+ DK +
Sbjct: 272 IAEHDL-DLMKIVDEPHEVLEAVYDYYEQRGGDKPI 306
>gi|113868700|ref|YP_727189.1| Rossmann fold nucleotide-binding protein [Ralstonia eutropha H16]
gi|113527476|emb|CAJ93821.1| Predicted Rossmann fold nucleotide-binding protein [Ralstonia
eutropha H16]
Length = 315
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
A + +PGG GTLDE+ E+L L+Q G VP ++M F+K LLD F G
Sbjct: 216 AFIVMPGGFGTLDELAEVLTLVQ---TGKSRSVP-VIMFGSRFWKGLLDWFRFTLLPMGL 271
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 135
+A+ ++ L KI D E L + ++Y+ DK +
Sbjct: 272 IAEHDL-DLMKIVDEPHEVLEAVYDYYEQRGGDKPI 306
>gi|423270039|ref|ZP_17249011.1| TIGR00730 family protein [Bacteroides fragilis CL05T00C42]
gi|423272508|ref|ZP_17251455.1| TIGR00730 family protein [Bacteroides fragilis CL05T12C13]
gi|423282612|ref|ZP_17261497.1| TIGR00730 family protein [Bacteroides fragilis HMW 615]
gi|392699706|gb|EIY92877.1| TIGR00730 family protein [Bacteroides fragilis CL05T00C42]
gi|392708774|gb|EIZ01878.1| TIGR00730 family protein [Bacteroides fragilis CL05T12C13]
gi|404582180|gb|EKA86875.1| TIGR00730 family protein [Bacteroides fragilis HMW 615]
Length = 195
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV+ALPGG GTL+E+ EI+ QL G L P +++N + F+ LL+ L + + G
Sbjct: 103 AVIALPGGCGTLEELLEIITWKQL---GLYLN-PIVILNTNGFFDPLLEMLENAIE-GNF 157
Query: 101 AKDEVASLWKICDSNSEAL 119
+ + +W + + EA+
Sbjct: 158 MRKQHGDIWHVAHTPEEAV 176
>gi|346993025|ref|ZP_08861097.1| decarboxylase family protein [Ruegeria sp. TW15]
Length = 280
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GT+DE+FE L LIQ R+ VPFL+ + F+++++++ D GT+
Sbjct: 190 AITIFPGGFGTMDELFESLTLIQTGRMER---VPFLLFGRE-FWERVINWEA-LADAGTI 244
Query: 101 AKDEVASLWKICDSNSEALSYL 122
+ DE L++ D+ EA+ +
Sbjct: 245 S-DEDLDLFRFVDTAQEAVEII 265
>gi|159042560|ref|YP_001531354.1| hypothetical protein Dshi_0004 [Dinoroseobacter shibae DFL 12]
gi|157910320|gb|ABV91753.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 285
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE+FE L LIQ R+ +PFL+ + F+K ++++ E GT+
Sbjct: 191 AIAVFPGGFGTLDELFESLTLIQTGRMSR---LPFLLFGTE-FWKTIINWDALAEA-GTI 245
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
+++++ L+++ D+ EA++ L E +D
Sbjct: 246 SEEDL-DLFRMVDTAEEAVA-LIEAWD 270
>gi|398347385|ref|ZP_10532088.1| rossmann fold nucleotide-binding protein [Leptospira broomii str.
5399]
Length = 258
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
+V PGG GT+DE+FE L LIQ R ++P V+ Y Y + +G +++G +
Sbjct: 174 GIVVFPGGFGTVDELFETLTLIQTGRNNLKIP----VIMYGRKYWDQVFHIGPMKEYGLI 229
Query: 101 AKDEVASLWKICDSNSEALSYL 122
D++ +L CD +E L L
Sbjct: 230 DPDDI-NLITYCDEPNEVLEVL 250
>gi|398383347|ref|ZP_10541418.1| TIGR00730 family protein [Sphingobium sp. AP49]
gi|397724949|gb|EJK85408.1| TIGR00730 family protein [Sphingobium sp. AP49]
Length = 292
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDF 90
A+ PGG GT DEMFE+L LIQ G P+P L+ D F+ K++DF
Sbjct: 204 ALAVFPGGFGTFDEMFELLTLIQ---TGKMKPIPILLFGKD-FWNKVVDF 249
>gi|265764797|ref|ZP_06093072.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263254181|gb|EEZ25615.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 198
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV+ALPGG GTL+E+ EI+ QL G L P +++N + F+ LL+ L + + G
Sbjct: 106 AVIALPGGCGTLEELLEIITWKQL---GLYLN-PIVILNTNGFFDPLLEMLENAIE-GNF 160
Query: 101 AKDEVASLWKICDSNSEAL 119
+ + +W + + EA+
Sbjct: 161 MRKQHGDIWHVAHTPEEAV 179
>gi|440748102|ref|ZP_20927356.1| Lysine decarboxylase family [Mariniradius saccharolyticus AK6]
gi|436483306|gb|ELP39360.1| Lysine decarboxylase family [Mariniradius saccharolyticus AK6]
Length = 190
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 43 VALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL 91
+A+PGG+GT +E+FEI+ L QL I P + N +Y KLLDFL
Sbjct: 102 IAMPGGIGTFEELFEIMTLNQLAYIQK----PLALYNLHGYYDKLLDFL 146
>gi|336407603|ref|ZP_08588100.1| hypothetical protein HMPREF1018_00114 [Bacteroides sp. 2_1_56FAA]
gi|335947507|gb|EGN09298.1| hypothetical protein HMPREF1018_00114 [Bacteroides sp. 2_1_56FAA]
Length = 195
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV+ALPGG GTL+E+ EI+ QL G L P +++N + F+ LL+ L + + G
Sbjct: 103 AVIALPGGCGTLEELLEIITWKQL---GLYLN-PIVILNTNGFFDPLLEMLENAIE-GNF 157
Query: 101 AKDEVASLWKICDSNSEAL 119
+ + +W + + EA+
Sbjct: 158 MRKQHGDIWHVAHTPEEAV 176
>gi|311740701|ref|ZP_07714528.1| possible Rossmann fold nucleotide-binding protein [Corynebacterium
pseudogenitalium ATCC 33035]
gi|311304221|gb|EFQ80297.1| possible Rossmann fold nucleotide-binding protein [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 254
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + A + LPGG+GT+DE FE++ ++Q ++ + P
Sbjct: 143 LNFRYFFARKTMFLKYS--------QAFICLPGGMGTMDEFFEVMCMVQTGKVTN---YP 191
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
++M + ++ LL+++ + + L+ + D EAL+++ + + + S DKR
Sbjct: 192 IVLMGTE-YWSGLLEWMDNTLAASGYINEGDRELFLLTDDPDEALAHIIQRHQVMS-DKR 249
Query: 135 VHE 137
+ E
Sbjct: 250 IRE 252
>gi|299066309|emb|CBJ37493.1| conserved protein of unknown function [Ralstonia solanacearum
CMR15]
Length = 194
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 37 CDRT-AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCE 95
DR A +A+PGG+GT +E+FE +QL G P ++N FY KLL F+
Sbjct: 95 ADRADAFIAMPGGIGTYEELFETFTWLQLGYHGK----PIGLLNVAGFYDKLLAFIDHAV 150
Query: 96 DWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
D G + + A L + D +E + L E ++DK
Sbjct: 151 DEGFLKRHH-ADLLHVSDDPAELIDRL-ERAPRHAVDK 186
>gi|451943857|ref|YP_007464493.1| hypothetical protein A605_05625 [Corynebacterium halotolerans YIM
70093 = DSM 44683]
gi|451903244|gb|AGF72131.1| hypothetical protein A605_05625 [Corynebacterium halotolerans YIM
70093 = DSM 44683]
Length = 283
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 14/109 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + + A V LPGG GTLDE+FE+L ++Q ++ P+
Sbjct: 149 LNFRYFFVRKTMFLKYS--------QAFVCLPGGFGTLDELFEVLVMVQTGKV-RNFPI- 198
Query: 75 FLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALSYL 122
V+ F+ L+D+LGD + G ++ +++ L+ + DS EA+ ++
Sbjct: 199 --VLIGTGFWSGLIDWLGDRLVEEGMISPEDM-DLFLLTDSVDEAVEHI 244
>gi|89901017|ref|YP_523488.1| hypothetical protein Rfer_2235 [Rhodoferax ferrireducens T118]
gi|89345754|gb|ABD69957.1| conserved hypothetical protein 730 [Rhodoferax ferrireducens T118]
Length = 287
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE++ L+Q + PVP ++ D ++K+L++ E+
Sbjct: 206 ALVAFPGGFGTLDELFEVITLVQTRKAK---PVPIVLFGTD-YWKRLVNMNVLVEEGVIS 261
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
A+D L+ D A + FY L
Sbjct: 262 AQD--LDLFTYVDDADAAWEVIRNFYKL 287
>gi|436838816|ref|YP_007324032.1| hypothetical protein FAES_5440 [Fibrella aestuarina BUZ 2]
gi|384070229|emb|CCH03439.1| hypothetical protein FAES_5440 [Fibrella aestuarina BUZ 2]
Length = 183
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
V+ALPGG GT DE+FEILA QL+ P ++N D +Y +L L C G +
Sbjct: 100 GVIALPGGYGTFDELFEILAWRQLKLYDG----PIAIINVDGYYDLMLQQLDRCVADGFL 155
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
K E +L + ++ E L + F++
Sbjct: 156 -KPENRALLIVTNTVDECLMAIENFWE 181
>gi|429750720|ref|ZP_19283735.1| TIGR00730 family protein [Capnocytophaga sp. oral taxon 332 str.
F0381]
gi|429164115|gb|EKY06269.1| TIGR00730 family protein [Capnocytophaga sp. oral taxon 332 str.
F0381]
Length = 228
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 61/115 (53%), Gaps = 15/115 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ +F ARK + + A +A+PGG GTLDE+FE + L+Q +I ++P+
Sbjct: 118 IKFNYFFARKVMFVKYS--------KAFIAMPGGFGTLDELFETITLVQTHKI-EQIPII 168
Query: 75 FLVMNYDSFYKKLLDFLGDC--EDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+ Y +K LLD++ + + + ++ +++ L + D+ + + + +FY+
Sbjct: 169 LVGTEY---WKGLLDWIREVLLQKFSSINAEDL-HLLHLVDTEDQVIKVIEDFYN 219
>gi|290957599|ref|YP_003488781.1| hypothetical protein SCAB_31221 [Streptomyces scabiei 87.22]
gi|260647125|emb|CBG70224.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 252
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 60/110 (54%), Gaps = 12/110 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A V LPGG+GTLDE+FE L L+Q +++ + P+
Sbjct: 151 LNFRYFFVRKMMFVKYA--------QGFVVLPGGLGTLDELFEALTLVQTQKV-TRFPI- 200
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
V+ +S++ L+D+L + A ++ +L+ + D EA++ +++
Sbjct: 201 --VLFGESYWSGLVDWLTNTLIAQGKAAEKDLTLFHVTDDVDEAVALVSK 248
>gi|60679669|ref|YP_209813.1| lysine decarboxylase [Bacteroides fragilis NCTC 9343]
gi|60491103|emb|CAH05851.1| putative lysine decarboxylase [Bacteroides fragilis NCTC 9343]
Length = 198
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV+ALPGG GTL+E+ EI+ QL G L P +++N + F+ LL+ L + + G
Sbjct: 106 AVIALPGGCGTLEELLEIITWKQL---GLYLN-PIVILNTNGFFDPLLEMLENAIE-GNF 160
Query: 101 AKDEVASLWKICDSNSEAL 119
+ + +W + + EA+
Sbjct: 161 MRKQHGDIWHVAHTPEEAV 179
>gi|293368629|ref|ZP_06615236.1| conserved hypothetical protein TIGR00730 [Bacteroides ovatus SD CMC
3f]
gi|292636271|gb|EFF54756.1| conserved hypothetical protein TIGR00730 [Bacteroides ovatus SD CMC
3f]
Length = 197
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
++ALPGG GTL+E+ EI+ QL G L P +++N + F+ LL+ L D
Sbjct: 105 GIIALPGGCGTLEELLEIITWKQL---GLYLN-PIIILNTNRFFDPLLEMLEKAID-ENF 159
Query: 101 AKDEVASLWKICDSNSEALSYLAE--FYDLS 129
+ + +WK+ + EA+ L E +D+S
Sbjct: 160 MRRQHGDIWKVAQTPEEAVRLLYETPVWDIS 190
>gi|383766515|ref|YP_005445496.1| hypothetical protein PSMK_14400 [Phycisphaera mikurensis NBRC
102666]
gi|381386783|dbj|BAM03599.1| hypothetical protein PSMK_14400 [Phycisphaera mikurensis NBRC
102666]
Length = 390
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNY-----DSFYKKLLDFL-GDC 94
A+ LPGG GT+DE FE L LIQ G VP ++++ D F+ + F+ G
Sbjct: 218 AIALLPGGFGTMDEGFEALTLIQ---TGKAPMVPIVMVDAPGSGEDGFWARWDRFIRGSL 274
Query: 95 EDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
D G ++ ++ SL+ I DS +EA ++ FY
Sbjct: 275 LDNGWISPEDT-SLYFITDSPAEAADHVRRFY 305
>gi|341613641|ref|ZP_08700510.1| decarboxylase family protein [Citromicrobium sp. JLT1363]
Length = 193
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 19/134 (14%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
P + ++E +QL+ + RK D A V LPGG+GT+DE+FE
Sbjct: 65 PHAMVEREFANHDCTQLITVDTMHERKARFTDLA--------DGFVTLPGGIGTMDELFE 116
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
L+ Q+ E+PV L N FY L+ F+ D G + + ++ DS E
Sbjct: 117 ALSWAQIGY--HEMPVGLL--NAFGFYDGLIQFVNQMGDTGFIRATH-REILQVADSLPE 171
Query: 118 ALSYLAEFYDLSSI 131
L LA + + I
Sbjct: 172 LLDKLASYVPNTPI 185
>gi|189346672|ref|YP_001943201.1| hypothetical protein Clim_1153 [Chlorobium limicola DSM 245]
gi|189340819|gb|ACD90222.1| conserved hypothetical protein [Chlorobium limicola DSM 245]
Length = 184
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V LPGG GTLDE+ EI+ L P +++N + F+ LL F + V
Sbjct: 101 AFVVLPGGFGTLDELMEIITWKHL----GHHQKPIILLNCNGFWDPLLAFFNRIAEECMV 156
Query: 101 AKDEVASLWKICDSNSEALSYL 122
K E + + +C + EAL +L
Sbjct: 157 GK-EYTNYYTVCSTTEEALEFL 177
>gi|89256736|ref|YP_514098.1| hypothetical protein FTL_1443 [Francisella tularensis subsp.
holarctica LVS]
gi|115315138|ref|YP_763861.1| hypothetical protein FTH_1404 [Francisella tularensis subsp.
holarctica OSU18]
gi|156502896|ref|YP_001428961.1| hypothetical protein FTA_1530 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|254368038|ref|ZP_04984058.1| hypothetical protein FTHG_01355 [Francisella tularensis subsp.
holarctica 257]
gi|290953986|ref|ZP_06558607.1| hypothetical protein FtulhU_06843 [Francisella tularensis subsp.
holarctica URFT1]
gi|422939061|ref|YP_007012208.1| hypothetical protein FTS_1415 [Francisella tularensis subsp.
holarctica FSC200]
gi|423051107|ref|YP_007009541.1| hypothetical protein F92_08035 [Francisella tularensis subsp.
holarctica F92]
gi|89144567|emb|CAJ79882.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica LVS]
gi|115130037|gb|ABI83224.1| possible Rossmann fold nucleotide-binding protein [Francisella
tularensis subsp. holarctica OSU18]
gi|134253848|gb|EBA52942.1| hypothetical protein FTHG_01355 [Francisella tularensis subsp.
holarctica 257]
gi|156253499|gb|ABU62005.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|407294212|gb|AFT93118.1| hypothetical protein FTS_1415 [Francisella tularensis subsp.
holarctica FSC200]
gi|421951829|gb|AFX71078.1| hypothetical protein F92_08035 [Francisella tularensis subsp.
holarctica F92]
Length = 237
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 29/127 (22%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
R+F RK I ++ + + +PGG GTLDE+F+I LIQ G ++ +P ++
Sbjct: 127 RYFFTRKAMFIKHSM--------SYIIMPGGFGTLDELFDITTLIQ---TGKKVKMPIIL 175
Query: 78 MNYDSFYKKLLDFLGDCEDW--------GTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
Y K DF G +W G ++++EV +L + DS E + +AE Y ++
Sbjct: 176 ------YGK--DFWGGLMEWIKTTLVGKGAISEEEV-NLLTLVDSIDETIEIIAEHY-MN 225
Query: 130 SIDKRVH 136
+ + H
Sbjct: 226 TYSSKAH 232
>gi|70949588|ref|XP_744190.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56524041|emb|CAH75177.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 345
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
+F RK L+ ++ A + +PGG GTLDE+ EILAL Q ++ E+P+
Sbjct: 234 FHYFFTRKFWLVYLSL--------AFIIMPGGFGTLDELMEILALKQCKKFKREVPI--- 282
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
V+ F+K +++F E +G +++V SL+ + DS EA + F
Sbjct: 283 VLFGKQFWKSIVNFDMLVE-YGLAHQEDVDSLF-MTDSVDEAYECVINF 329
>gi|123966454|ref|YP_001011535.1| dehydrogenase [Prochlorococcus marinus str. MIT 9515]
gi|123200820|gb|ABM72428.1| predicted dehydrogenase [Prochlorococcus marinus str. MIT 9515]
Length = 294
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V PGG GTLDE+FE+L L Q G + +P ++ D ++ K+++F C D G +
Sbjct: 212 AAVFFPGGFGTLDELFELLTLRQ---TGMKKNIPIILFGRD-YWNKVINFEYLC-DMGLI 266
Query: 101 AKDEVASLWKICDSNSEALSYLAEF 125
+ + S++K DS EA + + +F
Sbjct: 267 EEKHL-SIFKYADSAHEAWALIKKF 290
>gi|110677598|ref|YP_680605.1| hypothetical protein RD1_0190 [Roseobacter denitrificans OCh 114]
gi|109453714|gb|ABG29919.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 278
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 40 TAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGT 99
+A+ PGG GTLDE+FE L LIQ R+ PVP L+ F+ ++++ D GT
Sbjct: 187 SAICVFPGGFGTLDELFEALTLIQTGRM---QPVPVLLFGR-KFWDSIINW-DALADAGT 241
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYDLSS 130
++ +++ L+ +S +EA+ + + D+ +
Sbjct: 242 ISAEDL-ELFSFVESAAEAMEIIDRWQDMPT 271
>gi|319780359|ref|YP_004139835.1| hypothetical protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166247|gb|ADV09785.1| Conserved hypothetical protein CHP00730 [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 281
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 18/116 (15%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F+ RK + A AV PGG GT+DE FE L LIQ R+ +PV
Sbjct: 181 NFHYFAIRKMHFVMRA--------KAVAVFPGGFGTMDEFFETLTLIQTGRM-ERVPV-- 229
Query: 76 LVMNYDSFYKKL--LDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
++ SF+K+ LDFL + GT++ + + D+ EA ++ FY L
Sbjct: 230 -ILFGKSFWKRAIDLDFLAEQ---GTISPGD-QDIIDFVDTADEAWGIISRFYKLG 280
>gi|260432265|ref|ZP_05786236.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260416093|gb|EEX09352.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 280
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDEMFE L LIQ R+ VPFL+ + F+++++++ D GT+
Sbjct: 190 AITIFPGGFGTLDEMFESLTLIQTGRMER---VPFLLFGRE-FWERVINWKA-LADAGTI 244
Query: 101 AKDEVASLWKICDSNSEAL 119
++ ++ L++ ++ EA+
Sbjct: 245 SEQDL-DLFRFVETAQEAV 262
>gi|254369592|ref|ZP_04985603.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|157122546|gb|EDO66681.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
Length = 237
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 29/127 (22%)
Query: 18 RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
R+F RK I ++ + + +PGG GTLDE+F+I LIQ G ++ +P ++
Sbjct: 127 RYFFTRKAMFIKHSM--------SYIIMPGGFGTLDELFDITTLIQ---TGKKVKMPIIL 175
Query: 78 MNYDSFYKKLLDFLGDCEDW--------GTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
Y K DF G +W G ++++EV +L + DS E + +AE Y ++
Sbjct: 176 ------YGK--DFWGGLMEWIKTTLVGKGAISEEEV-NLLTLVDSIDETIEIIAEHY-MN 225
Query: 130 SIDKRVH 136
+ + H
Sbjct: 226 TYSSKAH 232
>gi|376295089|ref|YP_005166319.1| hypothetical protein DND132_0298 [Desulfovibrio desulfuricans
ND132]
gi|323457650|gb|EGB13515.1| Conserved hypothetical protein CHP00730 [Desulfovibrio
desulfuricans ND132]
Length = 219
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ R+F RK I A+ A VALPGG GTLDE+ E L LIQ RI P P
Sbjct: 119 EFRYFFIRKLMFIKYAL--------AYVALPGGYGTLDELSEALVLIQTHRIK---PFPI 167
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
++ + F+ L+D+ + K E L+ + D E + Y+
Sbjct: 168 VLFGTE-FWAGLIDWFKNQMVPNGFCKAEDLDLFIVTDDVDEVVGYI 213
>gi|213964260|ref|ZP_03392491.1| conserved hypothetical protein [Capnocytophaga sputigena Capno]
gi|213953095|gb|EEB64446.1| conserved hypothetical protein [Capnocytophaga sputigena Capno]
Length = 228
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 60/114 (52%), Gaps = 15/114 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ +F ARK + + A VA+PGG GTLDE+FE L L+Q +I +P
Sbjct: 118 IKFNYFFARKVMFVKYS--------KAFVAMPGGFGTLDELFETLTLVQTHKIDK---IP 166
Query: 75 FLVMNYDSFYKKLLDFLGD--CEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+++ D ++ L++++ E + ++ +++ L+ + D+ E + + +FY
Sbjct: 167 IILVGTD-YWGGLVEWIKSILSEKFNNISPEDL-DLFHLVDTEDEVIKVIEDFY 218
>gi|113474318|ref|YP_720379.1| hypothetical protein Tery_0447 [Trichodesmium erythraeum IMS101]
gi|110165366|gb|ABG49906.1| conserved hypothetical protein 730 [Trichodesmium erythraeum
IMS101]
Length = 355
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 7 LCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLER 66
+ ++L++ ++F RK + + A+ PGG GTLDE FE L L+Q +
Sbjct: 148 FIRGNNKLINFKYFFTRKLFFLK--------ETDAIALFPGGFGTLDEAFETLTLVQTGK 199
Query: 67 IGSELPVPFLVMNY--DSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
G P P ++++Y +++ DF+ + + + I D+ A +A
Sbjct: 200 FG---PAPVILIDYPGGNYWYDWNDFINKQLLLRGLISPNDYNFYTITDNLESAYEAIAN 256
Query: 125 FYDLSSIDKRVHE---VNLKS 142
FY + + V E + LKS
Sbjct: 257 FYRVYHSSRYVGEKFVIRLKS 277
>gi|410666038|ref|YP_006918409.1| hypothetical protein M5M_17755 [Simiduia agarivorans SA1 = DSM
21679]
gi|409028395|gb|AFV00680.1| hypothetical protein M5M_17755 [Simiduia agarivorans SA1 = DSM
21679]
Length = 291
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 49/78 (62%), Gaps = 6/78 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDE+FE L L+Q +++ P+P L+ F+++L++F E G +
Sbjct: 212 ALVVFPGGFGTLDELFETLTLVQTKKVQ---PLPILIFG-KQFWQRLVNFEFLVEQ-GMI 266
Query: 101 AKDEVASLWKICDSNSEA 118
+ +++A L++ +S +A
Sbjct: 267 SAEDLA-LFRYVESAEQA 283
>gi|406836170|ref|ZP_11095764.1| hypothetical protein SpalD1_31164 [Schlesneria paludicola DSM
18645]
Length = 216
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AVVALPGG GTL+E+FE I L+R+G L P +++N FY L++ L D
Sbjct: 123 AVVALPGGTGTLEELFEA---ITLKRLGLYLH-PIVLLNTRGFYDPLIELL-DRAITERF 177
Query: 101 AKDEVASLWKICDSNSEALSYL 122
++ A++W++ + E S +
Sbjct: 178 LGEKHATMWQVVNEPEEVFSAI 199
>gi|386774453|ref|ZP_10096831.1| hypothetical protein BparL_11734 [Brachybacterium paraconglomeratum
LC44]
Length = 267
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 14/111 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
VD R+F ARK + + + V +PGG GT DE+FE L L+Q +I P
Sbjct: 144 VDFRYFFARKTMFVKYS--------SGFVVMPGGFGTFDELFEALCLMQTHKIDM---FP 192
Query: 75 FLVMNYDSFYKKLLDFLGDC-EDWGTVAKDEVASLWKICDSNSEALSYLAE 124
+++ D +++ LLD++ D G ++ ++ L ++ D+ EAL+ L E
Sbjct: 193 VILVGRD-YWQGLLDWVSSAVVDRGMISLADL-DLVRVVDTAEEALAALGE 241
>gi|85715409|ref|ZP_01046391.1| hypothetical protein NB311A_12814 [Nitrobacter sp. Nb-311A]
gi|85697830|gb|EAQ35705.1| hypothetical protein NB311A_12814 [Nitrobacter sp. Nb-311A]
Length = 228
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 15/89 (16%)
Query: 19 FFSARKHGLI---DCAVRNDSCDRT--------AVVALPGGVGTLDEMFEILALIQLERI 67
F +AR+H L + V +D +R A VALPGGVGTL+E+ E L QL R
Sbjct: 98 FLTAREHALSRVQEMIVTHDMHERKRLMFERSDAFVALPGGVGTLEELVEQLTWQQLGRH 157
Query: 68 GSELPVPFLVMNYDSFYKKLLDFLGDCED 96
P ++ N D F++ LL L D
Sbjct: 158 SK----PIMLANVDGFWEPLLALLAHMRD 182
>gi|85704745|ref|ZP_01035846.1| decarboxylase family protein [Roseovarius sp. 217]
gi|85670563|gb|EAQ25423.1| decarboxylase family protein [Roseovarius sp. 217]
Length = 271
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDEMFE L LIQ +R+ VPFL+ +F++ ++++ E GT+
Sbjct: 190 AICVFPGGFGTLDEMFEALTLIQTDRMKR---VPFLLFGA-AFWQTIINWAALSEA-GTI 244
Query: 101 AKDEVASLWKICDSNSEALSYL 122
+ +++ L++ ++ EA+ +
Sbjct: 245 SAEDL-ELFQFVETADEAMQII 265
>gi|337265153|ref|YP_004609208.1| hypothetical protein Mesop_0619 [Mesorhizobium opportunistum
WSM2075]
gi|336025463|gb|AEH85114.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
Length = 281
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 18/116 (15%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F+ RK + A AV PGG GT+DE FE L LIQ R+ +PV
Sbjct: 181 NFHYFAIRKMHFVMRA--------KAVAVFPGGFGTMDEFFETLTLIQTGRM-ERVPV-- 229
Query: 76 LVMNYDSFYKKL--LDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
++ SF+K+ LDFL + GT++ + + D+ EA ++ FY L
Sbjct: 230 -ILFGKSFWKRAIDLDFLAEQ---GTISPGD-QDIIDFVDTADEAWGIISRFYKLG 280
>gi|401410432|ref|XP_003884664.1| putative lysine decarboxylase domain-containing protein [Neospora
caninum Liverpool]
gi|325119082|emb|CBZ54634.1| putative lysine decarboxylase domain-containing protein [Neospora
caninum Liverpool]
Length = 395
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F RK ++ A+ V+ PGGVGTLDE+ E+L L Q ++ ++P+
Sbjct: 250 EFHYFFTRKFWMVYTAL--------GVIVAPGGVGTLDELMEVLTLKQSGKMKRDIPI-- 299
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
V+ F+K ++ F E +G VA+ + L+ D +EA YL +F
Sbjct: 300 -VLFGKKFWKDVVCFEKLVE-YGVVAEKDRDQLF-YTDDETEAFEYLKQF 346
>gi|187929515|ref|YP_001900002.1| hypothetical protein Rpic_2436 [Ralstonia pickettii 12J]
gi|404396630|ref|ZP_10988424.1| TIGR00730 family protein [Ralstonia sp. 5_2_56FAA]
gi|187726405|gb|ACD27570.1| conserved hypothetical protein [Ralstonia pickettii 12J]
gi|348610573|gb|EGY60261.1| TIGR00730 family protein [Ralstonia sp. 5_2_56FAA]
Length = 317
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
A + +PGG GTLDE+ E+L L+Q G VP +VM F+K LLD F G
Sbjct: 218 AFIVMPGGFGTLDELAEVLTLVQ---TGKSRSVP-VVMFGSHFWKGLLDWFRFTLLPMGL 273
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYD 127
+A+ ++ + +I D +AL + EFY+
Sbjct: 274 IAEHDL-DIMRIVDEPKDALDAVYEFYE 300
>gi|421891275|ref|ZP_16322086.1| conserved hypothetical protein [Ralstonia solanacearum K60-1]
gi|378963384|emb|CCF98834.1| conserved hypothetical protein [Ralstonia solanacearum K60-1]
Length = 329
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
A + +PGG GTLDE+ E+L L+Q G VP +VM F+K LLD F G
Sbjct: 230 AFIVMPGGFGTLDELAEVLTLVQ---TGKSRSVP-VVMFGSRFWKGLLDWFRFTLLPMGL 285
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYD 127
+A+ ++ + +I D +AL + EFY+
Sbjct: 286 IAEHDL-DIMRIVDEPKDALDAVYEFYE 312
>gi|397689453|ref|YP_006526707.1| hypothetical protein MROS_0451 [Melioribacter roseus P3M]
gi|395810945|gb|AFN73694.1| hypothetical protein MROS_0451 [Melioribacter roseus P3M]
Length = 281
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 52/79 (65%), Gaps = 5/79 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A++ PGG GT+DE+ E+L L+Q +++ ++ + ++ ++++K++++F D GT+
Sbjct: 183 ALIVFPGGFGTMDELMEVLTLVQTKKVTKKMKI---IIYDEAYWKEIINF-DALIDHGTI 238
Query: 101 AKDEVASLWKICDSNSEAL 119
+K+++ L+ C++ EA
Sbjct: 239 SKEDM-KLFDFCNTVDEAF 256
>gi|344171962|emb|CCA84588.1| conserved hypothetical protein; putative exported protein
[Ralstonia syzygii R24]
Length = 320
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
A + +PGG GTLDE+ E+L LIQ G VP +VM F+K LLD F G
Sbjct: 221 AFIVMPGGFGTLDELAEVLTLIQ---TGKSRNVP-VVMFGSRFWKGLLDWFRFTLLPMGL 276
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYD 127
+A+ ++ + +I D +AL + EFY+
Sbjct: 277 IAEHDL-DIMRIVDEPKDALDAVYEFYE 303
>gi|300690851|ref|YP_003751846.1| hypothetical protein RPSI07_1191 [Ralstonia solanacearum PSI07]
gi|299077911|emb|CBJ50550.1| conserved hypothetical protein; putative exported protein
[Ralstonia solanacearum PSI07]
gi|344167307|emb|CCA79517.1| conserved hypothetical protein [blood disease bacterium R229]
Length = 320
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
A + +PGG GTLDE+ E+L LIQ G VP +VM F+K LLD F G
Sbjct: 221 AFIVMPGGFGTLDELAEVLTLIQ---TGKSRNVP-VVMFGSRFWKGLLDWFRFTLLPMGL 276
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYD 127
+A+ ++ + +I D +AL + EFY+
Sbjct: 277 IAEHDL-DIMRIVDEPKDALDAVYEFYE 303
>gi|299066167|emb|CBJ37350.1| conserved hypothetical protein; putative exported protein
[Ralstonia solanacearum CMR15]
Length = 321
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
A + +PGG GTLDE+ E+L L+Q G VP +VM F+K LLD F G
Sbjct: 222 AFIVMPGGFGTLDELAEVLTLVQ---TGKSRSVP-VVMFGSHFWKGLLDWFRFTLLPMGL 277
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYD 127
+A+ ++ + +I D +AL + EFY+
Sbjct: 278 IAEHDL-DIMRIVDEPKDALDAVYEFYE 304
>gi|347536289|ref|YP_004843714.1| hypothetical protein FBFL15_1407 [Flavobacterium branchiophilum
FL-15]
gi|345529447|emb|CCB69477.1| Protein of unknown function [Flavobacterium branchiophilum FL-15]
Length = 242
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 7/88 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC--EDWG 98
V +PGG GTLDE+FE + LIQ ++I ++ P+ ++ SF+ L+D++ + +
Sbjct: 151 GFVVMPGGFGTLDELFEAITLIQTKKI-AKFPI---ILVGSSFWAGLIDWIKNVLIDTEK 206
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFY 126
TV+ +++ +L KI D+ E + L FY
Sbjct: 207 TVSPEDL-NLIKIVDNEDEVVQALDSFY 233
>gi|300703484|ref|YP_003745086.1| hypothetical protein RCFBP_11161 [Ralstonia solanacearum CFBP2957]
gi|299071147|emb|CBJ42460.1| conserved protein of unknown function [Ralstonia solanacearum
CFBP2957]
Length = 329
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
A + +PGG GTLDE+ E+L L+Q G VP +VM F+K LLD F G
Sbjct: 230 AFIVMPGGFGTLDELAEVLTLVQ---TGKSRSVP-VVMFGSRFWKGLLDWFRFTLLPMGL 285
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYD 127
+A+ ++ + +I D +AL + EFY+
Sbjct: 286 IAEHDL-DIMRIVDEPKDALDAVYEFYE 312
>gi|410696396|gb|AFV75464.1| TIGR00730 family protein [Thermus oshimai JL-2]
Length = 213
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 15/113 (13%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
++ + LR+F RK + A V LPGG GTLDE+ E+L LIQ E++
Sbjct: 112 QTHALHLRYFFVRKVLFVRYA--------QGFVFLPGGFGTLDELSEVLVLIQTEKVH-- 161
Query: 71 LPVPFLVMNYD-SFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
PF V D ++++ LL ++ + G +A +++ SL D+ E ++ L
Sbjct: 162 ---PFPVFALDRAYWEGLLRWMAFLAEEGAIAPEDL-SLLTPLDTPEEVVAAL 210
>gi|87302138|ref|ZP_01084963.1| hypothetical protein WH5701_08054 [Synechococcus sp. WH 5701]
gi|87283063|gb|EAQ75019.1| hypothetical protein WH5701_08054 [Synechococcus sp. WH 5701]
Length = 351
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 15/117 (12%)
Query: 13 QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELP 72
+LV R+F RK + + A+V LPGG GTLDE+FE L LIQ G P
Sbjct: 146 RLVHFRYFFTRKLFFLR--------ESDALVVLPGGFGTLDELFEALTLIQ---TGRTAP 194
Query: 73 VPFLVM---NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+P +++ ++ + D L E G + D+ L S EA+ + FY
Sbjct: 195 IPVVLLAPPGHELWQHWPQDLLTGLEREGLIGPDD-GDLISRAGSAFEAIELIRHFY 250
>gi|220913265|ref|YP_002488574.1| hypothetical protein Achl_2520 [Arthrobacter chlorophenolicus A6]
gi|219860143|gb|ACL40485.1| conserved hypothetical protein [Arthrobacter chlorophenolicus A6]
Length = 260
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 59/106 (55%), Gaps = 14/106 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + A + LPGG+GTLDE+FE + L+Q ++ S P
Sbjct: 149 INFRYFFARKTMFVKYA--------QGFIVLPGGLGTLDELFEAMVLVQTRKVTS---FP 197
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEAL 119
+++ + F+ ++D++ G G V++ ++ L ++ DS +EA+
Sbjct: 198 IVLLGVE-FWGPMIDWIRGTLVAEGMVSEKDL-DLIQVVDSPAEAV 241
>gi|221053626|ref|XP_002258187.1| lysine decarboxylase [Plasmodium knowlesi strain H]
gi|193808020|emb|CAQ38724.1| lysine decarboxylase, putative [Plasmodium knowlesi strain H]
Length = 354
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 13/106 (12%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
+F RK LI ++ A + LPGG GTLDEM EIL L Q ++ +P+
Sbjct: 248 FHYFFTRKFWLIYLSL--------AFIILPGGFGTLDEMMEILTLRQCKKFKRNVPI--- 296
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
++ F+ +L+F E +G ++++++ S++ I D EA +Y+
Sbjct: 297 ILFGKDFWSSILNFKKLAE-YGLISQEDLDSIF-ITDCIEEAYNYV 340
>gi|441516515|ref|ZP_20998263.1| hypothetical protein GOHSU_04_00930 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441456568|dbj|GAC56224.1| hypothetical protein GOHSU_04_00930 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 264
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 12/105 (11%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A A + LPGGVGTLDE+FE + L+Q ++ + P+
Sbjct: 163 MNFRYFFVRKTMFVKYA--------QAFICLPGGVGTLDELFEAVTLVQTGKV-TRFPI- 212
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEAL 119
V+ F+ LLD++ + G++ E L + D+ EA+
Sbjct: 213 --VLVGREFWGPLLDWMRESLLAGSMISPEDMGLISLVDTVEEAV 255
>gi|254388890|ref|ZP_05004121.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|197702608|gb|EDY48420.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
Length = 277
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 12/110 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A + V LPGG+GTLDE+FE L L+Q ++ + P+
Sbjct: 176 VNFRYFFVRKTMFVKYA--------SGFVVLPGGLGTLDELFEALTLVQTGKV-TRFPI- 225
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
V+ +++ L+D+L D A + L+ + D EA+S + +
Sbjct: 226 --VLFGSAYWSGLVDWLRDTVVGQGKASERDLLLFHVTDDVDEAVSLVTK 273
>gi|152980866|ref|YP_001353846.1| hypothetical protein mma_2156 [Janthinobacterium sp. Marseille]
gi|151280943|gb|ABR89353.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 198
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 43 VALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAK 102
VA+PGG+GTL+E+FEIL QL P V+N D FY L+ FL + G V K
Sbjct: 102 VAMPGGIGTLEELFEILTWSQL----GFHQKPIGVLNVDGFYDGLIAFLQNQVAQGFV-K 156
Query: 103 DEVASL 108
D ASL
Sbjct: 157 DNQASL 162
>gi|298373165|ref|ZP_06983155.1| decarboxylase family protein [Bacteroidetes oral taxon 274 str.
F0058]
gi|298276069|gb|EFI17620.1| decarboxylase family protein [Bacteroidetes oral taxon 274 str.
F0058]
Length = 195
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 1 MLSPKVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILA 60
M+ K L + S+++ + + RK L D A A++ L GGVGT DE+FE LA
Sbjct: 69 MIDKKWLHEGLSEVIAVNTMAERKDILRDVA--------DAIIVLAGGVGTFDELFETLA 120
Query: 61 LIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
L QL P +++N + ++ ++L L D ++E ++W++ S E
Sbjct: 121 LKQL----GLFFKPIIIINTNGYFDEILRML-DKTVVENFMQEENKAMWQVISSTEE 172
>gi|270283867|ref|ZP_05965119.2| methionyl-tRNA formyltransferase [Bifidobacterium gallicum DSM
20093]
gi|270277590|gb|EFA23444.1| methionyl-tRNA formyltransferase [Bifidobacterium gallicum DSM
20093]
Length = 226
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 14/107 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + + + + PGG GTLDEMFE+L L+Q ++ +PV
Sbjct: 125 LNFRYFFVRKTMFVKYS--------SGFIICPGGFGTLDEMFELLTLVQTHKV-RYMPVA 175
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALS 120
Y ++ L+++L G +D G +++ + SL+ + D EA+S
Sbjct: 176 LFGSQY---WEGLIEWLRGPVQDHGMISQID-PSLFIVTDDPEEAVS 218
>gi|17546950|ref|NP_520352.1| hypothetical protein RSc2231 [Ralstonia solanacearum GMI1000]
gi|17429251|emb|CAD15938.1| conserved hypothetical protein 730 [Ralstonia solanacearum GMI1000]
Length = 317
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
A + +PGG GTLDE+ E+L L+Q G VP +VM F+K LLD F G
Sbjct: 218 AFIVMPGGFGTLDELAEVLTLVQ---TGKSRSVP-VVMFGSHFWKGLLDWFRFTLLPMGL 273
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYD 127
+A+ ++ + +I D +AL + EFY+
Sbjct: 274 IAEHDL-DIMRIVDEPKDALDAVYEFYE 300
>gi|254453438|ref|ZP_05066875.1| decarboxylase family protein [Octadecabacter arcticus 238]
gi|198267844|gb|EDY92114.1| decarboxylase family protein [Octadecabacter arcticus 238]
Length = 296
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE FE L LIQ R+ +PFL+ +F++ ++++ D GT+
Sbjct: 205 AITVFPGGFGTLDETFEALTLIQTGRMER---IPFLLFGR-AFWESIINWDA-LSDAGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYL 122
+ D++ +L++ ++ EA+ L
Sbjct: 260 SADDL-TLFRFVETAEEAVDAL 280
>gi|189464687|ref|ZP_03013472.1| hypothetical protein BACINT_01031 [Bacteroides intestinalis DSM
17393]
gi|189436961|gb|EDV05946.1| TIGR00730 family protein [Bacteroides intestinalis DSM 17393]
Length = 195
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 13/114 (11%)
Query: 9 KQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIG 68
K ++++++ RK + D + AV+ALPGG GTL+E+ EI+ QL G
Sbjct: 79 KGLTEMIEVENMHQRKQKMADLS--------DAVIALPGGCGTLEELLEIITWKQL---G 127
Query: 69 SELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
L P +++N ++F+ LL L D +++ ++W + + EA+ +
Sbjct: 128 LYLN-PVVILNTNNFFDPLLAMLQHAMD-ENFMREQHGAIWHVASTPQEAVELI 179
>gi|407976006|ref|ZP_11156908.1| hypothetical protein NA8A_16888 [Nitratireductor indicus C115]
gi|407428507|gb|EKF41189.1| hypothetical protein NA8A_16888 [Nitratireductor indicus C115]
Length = 279
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F+ RK + A AV PGG GT+DE+FE L LIQ R+ VP
Sbjct: 181 NFHYFAVRKMHFMMRA--------KAVAVFPGGFGTMDELFESLTLIQTGRMER---VPV 229
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
L+ + F++ ++ L + GT++ + L D+ EA + +AEFY+L
Sbjct: 230 LLFGKE-FWQNAIN-LAFLAEQGTISPGD-DQLITFVDTAEEAWAKVAEFYEL 279
>gi|430742821|ref|YP_007201950.1| hypothetical protein Sinac_1893 [Singulisphaera acidiphila DSM
18658]
gi|430014541|gb|AGA26255.1| TIGR00730 family protein [Singulisphaera acidiphila DSM 18658]
Length = 309
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 12/113 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D R+F RK + A V PGG GTLDE+FE L L+Q +I S P+
Sbjct: 174 IDFRYFFVRKTMFVKYA--------NGFVIFPGGFGTLDELFEALTLVQTRKI-SRFPI- 223
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
V+ +++ LLD++ + E +L + DS EA + + Y+
Sbjct: 224 --VLFGSAYWNGLLDWIKGTQLAHGAISPEDMNLLIVTDSIDEARDVIVDCYN 274
>gi|340383828|ref|XP_003390418.1| PREDICTED: LOG family protein PA4923-like [Amphimedon
queenslandica]
Length = 188
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 43 VALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAK 102
+ LPGGVGT+DE+FE+ A L RIG P L++N + +Y L+DF+ +
Sbjct: 104 IVLPGGVGTMDELFEVWA---LARIGVH-SKPTLLLNIEGYYDSLIDFMDTMTAAAYIGA 159
Query: 103 DEVASLWKICDSNSEA 118
D+ A L + D EA
Sbjct: 160 DDRAYL--LVDDRPEA 173
>gi|398827995|ref|ZP_10586197.1| putative Rossmann fold nucleotide-binding protein [Phyllobacterium
sp. YR531]
gi|398218713|gb|EJN05215.1| putative Rossmann fold nucleotide-binding protein [Phyllobacterium
sp. YR531]
Length = 280
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GT+DE FE L LIQ R+ +PFL+ SF++K ++F E G V
Sbjct: 198 AMAIFPGGFGTMDETFEALTLIQTGRMER---IPFLLFG-KSFWEKTINFDYLAEQ-GVV 252
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ ++ L D EA + +FY+L
Sbjct: 253 SPSDL-ELITFVDEAEEAWDVIRKFYEL 279
>gi|88811282|ref|ZP_01126538.1| hypothetical protein NB231_10778 [Nitrococcus mobilis Nb-231]
gi|88791821|gb|EAR22932.1| hypothetical protein NB231_10778 [Nitrococcus mobilis Nb-231]
Length = 244
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R F +RK + A +A V LPGG GTLDE+ EIL L+Q G +P +
Sbjct: 129 FRHFFSRKVMFVKYA--------SAYVVLPGGFGTLDELAEILTLVQ---TGKTRRIP-I 176
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
++ + F+ L+D+ D E +L+K+ D S + + +FY+
Sbjct: 177 ILVHTPFWDGLIDWFRDTLVAQGAIDPEDLTLFKVLDEPSAVVDAIFDFYE 227
>gi|254674147|emb|CBA09931.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
Length = 210
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 13 QLVDLRF--FSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
Q + LRF F+ RK + A V +PGG GTLDE+FEIL L+Q ++
Sbjct: 103 QDIALRFSRFAERKAAFFSYS--------QAYVVMPGGFGTLDELFEILTLVQTGKV--- 151
Query: 71 LPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
P P +++ +F+ L +++ + + SL+ I D E ++YL+E
Sbjct: 152 PPRPVVLVG-KAFWSGLAEWINAQLLVRGLISEGAVSLFAISDDEDEIVAYLSE 204
>gi|294814830|ref|ZP_06773473.1| Lysine decarboxylase family protein [Streptomyces clavuligerus ATCC
27064]
gi|326443208|ref|ZP_08217942.1| hypothetical protein SclaA2_19183 [Streptomyces clavuligerus ATCC
27064]
gi|294327429|gb|EFG09072.1| Lysine decarboxylase family protein [Streptomyces clavuligerus ATCC
27064]
Length = 249
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 12/110 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A + V LPGG+GTLDE+FE L L+Q ++ + P+
Sbjct: 148 VNFRYFFVRKTMFVKYA--------SGFVVLPGGLGTLDELFEALTLVQTGKV-TRFPI- 197
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
V+ +++ L+D+L D A + L+ + D EA+S + +
Sbjct: 198 --VLFGSAYWSGLVDWLRDTVVGQGKASERDLLLFHVTDDVDEAVSLVTK 245
>gi|406661904|ref|ZP_11070014.1| hypothetical protein B879_02032 [Cecembia lonarensis LW9]
gi|405554262|gb|EKB49372.1| hypothetical protein B879_02032 [Cecembia lonarensis LW9]
Length = 244
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC--EDWG 98
V LPGG GTLDE+FE L LIQ +IG P+ V+ F+ LLD++ E
Sbjct: 153 GFVVLPGGFGTLDELFEALTLIQTIKIG-RFPI---VLVGKEFWGGLLDWIKSTLLEQHA 208
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFY 126
+ ++++ L+ + D +EA+ + EFY
Sbjct: 209 YINEEDL-DLFYVVDDATEAVKVIDEFY 235
>gi|348590444|ref|YP_004874906.1| hypothetical protein TASI_1129 [Taylorella asinigenitalis MCE3]
gi|347974348|gb|AEP36883.1| hypothetical protein TASI_1129 [Taylorella asinigenitalis MCE3]
Length = 222
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 12/116 (10%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+SQ + ++F +RK + A + +PGG GT+DE+FE L L+Q G
Sbjct: 106 QSQSIYFKYFVSRKTTFF--------MNSWAYIIMPGGFGTMDELFEALTLVQ---TGKA 154
Query: 71 LPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
P +++ + F+ LLDF+ + + + L + D E L + E+Y
Sbjct: 155 NKAPIILVGSE-FWSGLLDFIKNGQLANGYISPKDLDLISVTDDADEVLKIVTEYY 209
>gi|223937581|ref|ZP_03629484.1| conserved hypothetical protein [bacterium Ellin514]
gi|223893744|gb|EEF60202.1| conserved hypothetical protein [bacterium Ellin514]
Length = 227
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ +F ARK + ++ V +PGG GTLDE FE+L L+Q RI P
Sbjct: 114 INFHYFFARKVCFVKYSL--------GFVFMPGGFGTLDEFFEVLTLVQTRRI-PRFP-- 162
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
L++ +++ L+ ++ D G + L+++ D EA+ + ++
Sbjct: 163 -LILFGKTYWTGLIKWMRATLDAGKFISEGDMELFRVTDDPQEAIDVILDY 212
>gi|428222917|ref|YP_007107087.1| Rossmann fold nucleotide-binding protein [Synechococcus sp. PCC
7502]
gi|427996257|gb|AFY74952.1| putative Rossmann fold nucleotide-binding protein [Synechococcus
sp. PCC 7502]
Length = 344
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+S V+ ++F RK + + +A+ PGG GT DE+FE L L+Q G
Sbjct: 150 DSHNVNFKYFFTRKLFFLR--------ETSAIAIFPGGFGTQDELFESLTLLQ---TGKS 198
Query: 71 LPVPFLVMNYDS--FYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
P P ++M+ ++++ ++ C + E SL+ I + A++ +A FY +
Sbjct: 199 TPKPIILMDKPDGCYWQEWDSYMQTCLQGRKLINPEDHSLYTITSDITAAVAKIANFYKV 258
Query: 129 SSIDKRVHEV 138
+ V ++
Sbjct: 259 YHSSRWVKDI 268
>gi|320451388|ref|YP_004203484.1| hypothetical protein TSC_c23330 [Thermus scotoductus SA-01]
gi|320151557|gb|ADW22935.1| conserved hypothetical protein [Thermus scotoductus SA-01]
Length = 214
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
++ + LR+F RK + A A V LPGG GTLDE+ E+L LIQ E++
Sbjct: 112 QTHTLTLRYFFVRKVLFVRYA--------HAFVFLPGGFGTLDELSEVLVLIQTEKVH-- 161
Query: 71 LPVPFLVMNYD-SFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
PF V D +++ LL ++ ++ G + ++A L + DS E + L
Sbjct: 162 ---PFPVFALDRGYWQGLLSWMESLKEQGAIDPKDLALLTPL-DSPEEVVQAL 210
>gi|240849746|ref|YP_002971134.1| hypothetical protein Bgr_00700 [Bartonella grahamii as4aup]
gi|240266869|gb|ACS50457.1| hypothetical protein Bgr_00700 [Bartonella grahamii as4aup]
Length = 287
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE+FE L L+Q R+ VP L+ + F+ ++F E GT+
Sbjct: 205 ALAIFPGGFGTLDELFETLTLVQTGRMKQ---VPILLFGKE-FWSNTINFEYLSEQ-GTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ +V + K ++ +EA + FY+L
Sbjct: 260 SPTDV-NFVKFVNTAAEAFEEIRSFYEL 286
>gi|359420620|ref|ZP_09212553.1| hypothetical protein GOARA_061_00610 [Gordonia araii NBRC 100433]
gi|358243403|dbj|GAB10622.1| hypothetical protein GOARA_061_00610 [Gordonia araii NBRC 100433]
Length = 257
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK I A A V LPGG GTLDE+FE L L+Q ++ ++ P+
Sbjct: 152 VNFRYFFARKTMFIKYA--------QAFVCLPGGFGTLDELFEALTLVQTHKV-TQFPI- 201
Query: 75 FLVMNYDSFYKKLLDFL 91
++ F+ L+D++
Sbjct: 202 --ILVGSEFWGGLVDWI 216
>gi|451941374|ref|YP_007462011.1| hypothetical protein BVwin_00650 [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451900761|gb|AGF75223.1| hypothetical protein BVwin_00650 [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
Length = 287
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE+FE L LIQ R+ VP L+ + F+ ++F G GT+
Sbjct: 205 ALAVFPGGFGTLDELFETLTLIQTGRMKR---VPILLFGKE-FWDNAINF-GYLSAQGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLS 129
+ ++ +L ++ +EA + FY LS
Sbjct: 260 SPSDL-TLITFVNTAAEAFEEIRVFYKLS 287
>gi|373111341|ref|ZP_09525598.1| TIGR00730 family protein [Myroides odoratimimus CCUG 10230]
gi|423130974|ref|ZP_17118649.1| TIGR00730 family protein [Myroides odoratimimus CCUG 12901]
gi|423134665|ref|ZP_17122312.1| TIGR00730 family protein [Myroides odoratimimus CIP 101113]
gi|423327406|ref|ZP_17305214.1| TIGR00730 family protein [Myroides odoratimimus CCUG 3837]
gi|371640530|gb|EHO06128.1| TIGR00730 family protein [Myroides odoratimimus CCUG 10230]
gi|371643526|gb|EHO09076.1| TIGR00730 family protein [Myroides odoratimimus CCUG 12901]
gi|371645865|gb|EHO11385.1| TIGR00730 family protein [Myroides odoratimimus CIP 101113]
gi|404606881|gb|EKB06416.1| TIGR00730 family protein [Myroides odoratimimus CCUG 3837]
Length = 240
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 7/88 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC--EDWG 98
V +PGG GTLDE+FE + LIQ ++I ++ P+ V+ +F+ L+D++ D + +
Sbjct: 149 GFVVMPGGFGTLDELFEAITLIQTKKI-AKFPI---VLVGSAFWGGLIDWVKDVLLDKYH 204
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFY 126
++ +++ +L KI DS E + + FY
Sbjct: 205 NISPEDM-NLIKIVDSADEVVEVIDAFY 231
>gi|53711353|ref|YP_097345.1| lysine decarboxylase [Bacteroides fragilis YCH46]
gi|375356454|ref|YP_005109225.1| putative lysine decarboxylase [Bacteroides fragilis 638R]
gi|52214218|dbj|BAD46811.1| putative lysine decarboxylase [Bacteroides fragilis YCH46]
gi|301161134|emb|CBW20672.1| putative lysine decarboxylase [Bacteroides fragilis 638R]
Length = 198
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV+ALPGG GTL+E+ EI+ QL G L P +++N + F+ L++ L + + G
Sbjct: 106 AVIALPGGCGTLEELLEIITWKQL---GLYLN-PIVILNTNGFFDPLMEMLENAIE-GNF 160
Query: 101 AKDEVASLWKICDSNSEAL 119
+ + +W + + EA+
Sbjct: 161 MRKQHGDIWHVAHTPEEAV 179
>gi|296123882|ref|YP_003631660.1| hypothetical protein Plim_3649 [Planctomyces limnophilus DSM 3776]
gi|296016222|gb|ADG69461.1| conserved hypothetical protein [Planctomyces limnophilus DSM 3776]
Length = 359
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 15/119 (12%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+ +LV RFF RK + + A+V PGG GTLDE+FE L LIQ G
Sbjct: 152 DPKLVTFRFFFTRKLMFVK--------EVHAIVVYPGGFGTLDELFETLTLIQ---TGKR 200
Query: 71 LPVPFLVMNYD--SFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+P ++++ +++ L DF+ + G ++ ++ SL++I S + A+S + FY
Sbjct: 201 DMLPIVLVDQPDCNYWCALQDFIRHQLLERGLISPADL-SLYRIVHSPAAAVSEVLSFY 258
>gi|86143127|ref|ZP_01061549.1| hypothetical protein MED217_10792 [Leeuwenhoekiella blandensis
MED217]
gi|85830572|gb|EAQ49031.1| hypothetical protein MED217_10792 [Leeuwenhoekiella blandensis
MED217]
Length = 205
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D +F RK + + V LPGG GTLDE+FE + LIQ +I + P+
Sbjct: 96 IDFDYFFVRKVMFVKYS--------QGFVVLPGGFGTLDELFESITLIQTHKI-DKFPII 146
Query: 75 FLVMNYDSFYKKLLDFLGDC--EDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+ Y ++ L D++ + E + T++ ++ L + D+ E L L FY+
Sbjct: 147 LVGTEY---WQGLFDWIKNTLLEKFNTISPGDI-DLLHLVDTEDEVLEVLNNFYN 197
>gi|406663942|ref|ZP_11071947.1| hypothetical protein B879_03985 [Cecembia lonarensis LW9]
gi|405551758|gb|EKB47414.1| hypothetical protein B879_03985 [Cecembia lonarensis LW9]
Length = 252
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A + +PGG GTLDE FE L LIQ ++ PV V+ F++ L +++ ++GT+
Sbjct: 149 AFIVMPGGFGTLDEFFEALTLIQ-TKVMKRFPV---VLMCSDFHQSLYEYIQHLAEYGTI 204
Query: 101 AKDEVASLWKICDSNSEALSYLAEF 125
K ++ L+ + DS E ++ +F
Sbjct: 205 DKKDL-DLFLLTDSIEEMEQHIRKF 228
>gi|291302945|ref|YP_003514223.1| hypothetical protein Snas_5499 [Stackebrandtia nassauensis DSM
44728]
gi|290572165|gb|ADD45130.1| conserved hypothetical protein [Stackebrandtia nassauensis DSM
44728]
Length = 241
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 12/79 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D R+F ARK + + A LPGG GTLDE+FE L L+Q +++ + PV
Sbjct: 131 LDFRYFFARKTMFVKYS--------QAFCVLPGGFGTLDELFEALTLVQTKKV-TRFPVV 181
Query: 75 FLVMNYDSFYKKLLDFLGD 93
+ ++Y ++ L+D+L D
Sbjct: 182 LMGVSY---WQGLIDWLRD 197
>gi|189426094|ref|YP_001953271.1| hypothetical protein Glov_3045 [Geobacter lovleyi SZ]
gi|189422353|gb|ACD96751.1| conserved hypothetical protein [Geobacter lovleyi SZ]
Length = 342
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Query: 3 SPKVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALI 62
S + +LV ++F RK + A AV PGG GTLDE E+ L+
Sbjct: 143 SANPVMHNNPRLVTYKYFFNRKVAFVKEA--------DAVAVFPGGFGTLDEAMEVFTLV 194
Query: 63 QLERIGSELPVPF-LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSY 121
Q G P P LV + D F+++ +F+ + + E S++ I EA +
Sbjct: 195 Q---TGKTSPKPLVLVDDEDGFWEQFFEFVKEQLLAKGLISGEDFSIFTITKDEREAAAV 251
Query: 122 LAEFY 126
+ FY
Sbjct: 252 IETFY 256
>gi|13474055|ref|NP_105623.1| hypothetical protein mll4842 [Mesorhizobium loti MAFF303099]
gi|14024807|dbj|BAB51409.1| mll4842 [Mesorhizobium loti MAFF303099]
Length = 236
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 18/116 (15%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F+ RK + A AV PGG GT+DE FE L LIQ R+ +PV
Sbjct: 136 NFHYFAIRKMHFVMRA--------KAVAVFPGGFGTMDEFFETLTLIQTGRM-ERVPV-- 184
Query: 76 LVMNYDSFYKKL--LDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
++ SF+K+ LDFL + GT++ + + D+ EA ++ FY L
Sbjct: 185 -ILFGKSFWKRAINLDFLAEQ---GTISPGD-QDIIDFVDTADEAWGIVSRFYKLG 235
>gi|260062819|ref|YP_003195899.1| hypothetical protein RB2501_14554 [Robiginitalea biformata
HTCC2501]
gi|88784387|gb|EAR15557.1| hypothetical protein RB2501_14554 [Robiginitalea biformata
HTCC2501]
Length = 228
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL-GDCEDWGT 99
V +PGG GTLDE+FE + LIQ E+IG P+ V+ F+ LLD++ G + G
Sbjct: 138 GFVVMPGGFGTLDELFEAMTLIQTEKIG-RFPI---VLFGTKFWGGLLDWIKGTMLEAGN 193
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFY 126
++ ++ L ++ D+ E + + FY
Sbjct: 194 ISPTDL-DLIQLVDTPEEVVEIIDGFY 219
>gi|326381458|ref|ZP_08203152.1| hypothetical protein SCNU_00865 [Gordonia neofelifaecis NRRL
B-59395]
gi|326199705|gb|EGD56885.1| hypothetical protein SCNU_00865 [Gordonia neofelifaecis NRRL
B-59395]
Length = 178
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 11/83 (13%)
Query: 43 VALPGGVGTLDEMFEILALIQLERIGSELPV---PFLVMNYDSFYKKLLDFLGDCEDWGT 99
+ LPGG+GT +E+FE G+ L V P +++N++ FY L+ +L D G
Sbjct: 101 ITLPGGIGTFEELFETWT-------GAYLGVHDKPIVLLNHEGFYDPLIGWLDDLAARGF 153
Query: 100 VAKDEVASLWKICDSNSEALSYL 122
VA + L K+C + +++SYL
Sbjct: 154 VADRALGKL-KVCATVGDSISYL 175
>gi|119715437|ref|YP_922402.1| hypothetical protein Noca_1201 [Nocardioides sp. JS614]
gi|119536098|gb|ABL80715.1| conserved hypothetical protein 730 [Nocardioides sp. JS614]
Length = 243
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + + +ALPGG+GTLDE+FE + L+Q ++I + P+
Sbjct: 140 INFRYFFVRKTMFVKYS--------QGYIALPGGLGTLDELFEAMTLVQTQKI-TSFPIV 190
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
L + + + LLD++GD
Sbjct: 191 LLGV---AEWAGLLDWMGDS 207
>gi|338214244|ref|YP_004658305.1| hypothetical protein [Runella slithyformis DSM 19594]
gi|336308071|gb|AEI51173.1| Conserved hypothetical protein CHP00730 [Runella slithyformis DSM
19594]
Length = 241
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 2 LSPKVLCKQESQL-------VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDE 54
L+ K+ +Q S L ++ FF RK + + V +PGG GTLDE
Sbjct: 112 LNIKLPFEQHSNLYIDPDKNINFDFFFVRKVMFVKYS--------QGFVVMPGGFGTLDE 163
Query: 55 MFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCE-DWGTVAKDEVASLWKICD 113
+FE L LIQ ++IG P+ VM ++ LL+++ D E L+ + D
Sbjct: 164 LFEALTLIQTKKIG-RFPI---VMVGKDYWSGLLEWIKTTMLDTERNINPEDLKLFSLVD 219
Query: 114 SNSEALSYLAEFY 126
+ EA+ + EFY
Sbjct: 220 TAEEAVRVIDEFY 232
>gi|456389063|gb|EMF54503.1| hypothetical protein SBD_4171 [Streptomyces bottropensis ATCC
25435]
Length = 252
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 60/110 (54%), Gaps = 12/110 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A V LPGG+GTLDE+FE L L+Q +++ + P+
Sbjct: 151 LNFRYFFVRKMMFVKYA--------QGFVVLPGGLGTLDELFEALTLVQTQKV-TRFPI- 200
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
V+ +S++ L+D+L + A ++ +L+ + D EA++ +++
Sbjct: 201 --VLFGESYWGGLIDWLRNTLIAEGKAAEKDLTLFHVTDDVDEAVALVSK 248
>gi|163847864|ref|YP_001635908.1| hypothetical protein Caur_2310 [Chloroflexus aurantiacus J-10-fl]
gi|222525737|ref|YP_002570208.1| hypothetical protein Chy400_2488 [Chloroflexus sp. Y-400-fl]
gi|163669153|gb|ABY35519.1| conserved hypothetical protein [Chloroflexus aurantiacus J-10-fl]
gi|222449616|gb|ACM53882.1| conserved hypothetical protein [Chloroflexus sp. Y-400-fl]
Length = 240
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V R+F RK + A A V PGG GTLDE+FE L LIQ +I + PV
Sbjct: 127 VRFRYFFIRKIMFVKYA--------QAFVIFPGGFGTLDELFEALTLIQTGKI-HDFPV- 176
Query: 75 FLVMNYDSFYKKLLDFLGDC-EDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
++ F++ +LD+ + GT+A+ ++ L ICD + +++ + Y
Sbjct: 177 --ILYGSDFWQGMLDWARNTLLAHGTIAQTDIDRLL-ICDDPQQICAHVVQSYQ 227
>gi|352081697|ref|ZP_08952539.1| Conserved hypothetical protein CHP00730 [Rhodanobacter sp. 2APBS1]
gi|351682603|gb|EHA65699.1| Conserved hypothetical protein CHP00730 [Rhodanobacter sp. 2APBS1]
Length = 284
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG GTLDE+FE+L L+Q ++ LP+ V+ +F+ + D E
Sbjct: 199 ALVAFPGGFGTLDELFEVLTLVQTGKM-PRLPI---VLVGSTFWHRACDLAFLIEQGMLD 254
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
+D A L + ++ +A++ + FYD
Sbjct: 255 PRD--AELLSVVENAEQAVAAMHAFYD 279
>gi|326334443|ref|ZP_08200655.1| methionyl-tRNA formyltransferase [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325693410|gb|EGD35337.1| methionyl-tRNA formyltransferase [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 229
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 17/115 (14%)
Query: 16 DLRF--FSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPV 73
+LRF F ARK + + A V PGG GT+DE+FE + LIQ +I P
Sbjct: 119 NLRFNYFFARKVMFVRYS--------QAFVVFPGGFGTMDELFEAITLIQTTKIE---PF 167
Query: 74 PFLVMNYDSFYKKLLDFLGDC--EDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
P +++ F+ L++++ + + +G ++ ++ ++K+ D+ E + +FY
Sbjct: 168 PIILVG-SEFWNGLINWIKEVLLDKFGNISAKDI-DIFKVVDTTDEVEEIIEKFY 220
>gi|254458915|ref|ZP_05072338.1| lysine decarboxylase family protein [Sulfurimonas gotlandica GD1]
gi|373868416|ref|ZP_09604814.1| putative lysine decarboxylase [Sulfurimonas gotlandica GD1]
gi|207084186|gb|EDZ61475.1| lysine decarboxylase family protein [Sulfurimonas gotlandica GD1]
gi|372470517|gb|EHP30721.1| putative lysine decarboxylase [Sulfurimonas gotlandica GD1]
Length = 256
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 12/73 (16%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F +RK L+ ++ A V PGG GTLDE+FE L LIQ ++ V V+
Sbjct: 126 YFFSRKVMLVKYSI--------AYVIFPGGYGTLDELFEALTLIQTRKVTG---VKVFVV 174
Query: 79 NYDSFYKKLLDFL 91
D FYK LLDF+
Sbjct: 175 GVD-FYKPLLDFI 186
>gi|221507824|gb|EEE33411.1| lysine decarboxylase domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 397
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F RK ++ A+ V+ PGGVGTLDE+ E+L L Q ++ ++P+
Sbjct: 252 EFHYFFTRKFWMVYSAL--------GVIVAPGGVGTLDELMEVLTLKQSGKMKRDIPI-- 301
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
V+ F+K ++ F ++G V++ + L+ D N EA YL +F
Sbjct: 302 -VLFGKQFWKDIICF-DKLVEYGVVSEKDRDQLFYTDDEN-EAFEYLKQF 348
>gi|221483338|gb|EEE21657.1| lysine decarboxylase domain-containing protein, putative
[Toxoplasma gondii GT1]
Length = 397
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F RK ++ A+ V+ PGGVGTLDE+ E+L L Q ++ ++P+
Sbjct: 252 EFHYFFTRKFWMVYSAL--------GVIVAPGGVGTLDELMEVLTLKQSGKMKRDIPI-- 301
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
V+ F+K ++ F ++G V++ + L+ D N EA YL +F
Sbjct: 302 -VLFGKQFWKDIICF-DKLVEYGVVSEKDRDQLFYTDDEN-EAFEYLKQF 348
>gi|116071360|ref|ZP_01468629.1| hypothetical protein BL107_16980 [Synechococcus sp. BL107]
gi|116066765|gb|EAU72522.1| hypothetical protein BL107_16980 [Synechococcus sp. BL107]
Length = 297
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 18/116 (15%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+FS RK + +V V PGG GTLDE+FE+L L Q +G++ P+P
Sbjct: 191 QFNYFSIRKFHFVMRSV--------GAVLFPGGYGTLDELFELLTLRQ---VGTKSPMPI 239
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL----AEFYD 127
++ + F+++L+DF E G ++ +++ L+ DS EA ++ +EF++
Sbjct: 240 VLFGRE-FWERLIDFDFLAES-GLISLNDL-KLFHFADSAEEAWMHIQAGTSEFHN 292
>gi|114570802|ref|YP_757482.1| hypothetical protein Mmar10_2252 [Maricaulis maris MCS10]
gi|114341264|gb|ABI66544.1| conserved hypothetical protein 730 [Maricaulis maris MCS10]
Length = 201
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
S+L +R ARK ++ + A +A+PGG+GT++EMFE+ QL +
Sbjct: 87 SELHVVRSMHARKAKMVKLS--------QAFIAMPGGIGTMEEMFEVWTWAQL----GQH 134
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASL 108
P ++N + +Y +L+ FL D G +A + +L
Sbjct: 135 RNPVGLLNVNGYYDELVAFLDKMTDQGFLAPEHRGAL 171
>gi|383116418|ref|ZP_09937168.1| TIGR00730 family protein [Bacteroides sp. 3_2_5]
gi|423248081|ref|ZP_17229097.1| TIGR00730 family protein [Bacteroides fragilis CL03T00C08]
gi|423253029|ref|ZP_17233960.1| TIGR00730 family protein [Bacteroides fragilis CL03T12C07]
gi|423259585|ref|ZP_17240508.1| TIGR00730 family protein [Bacteroides fragilis CL07T00C01]
gi|423263442|ref|ZP_17242445.1| TIGR00730 family protein [Bacteroides fragilis CL07T12C05]
gi|382973880|gb|EES88599.2| TIGR00730 family protein [Bacteroides sp. 3_2_5]
gi|387776044|gb|EIK38145.1| TIGR00730 family protein [Bacteroides fragilis CL07T00C01]
gi|392657556|gb|EIY51189.1| TIGR00730 family protein [Bacteroides fragilis CL03T12C07]
gi|392660798|gb|EIY54399.1| TIGR00730 family protein [Bacteroides fragilis CL03T00C08]
gi|392707492|gb|EIZ00610.1| TIGR00730 family protein [Bacteroides fragilis CL07T12C05]
Length = 195
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV+ALPGG GTL+E+ EI+ QL G L P +++N + F+ L++ L + + G
Sbjct: 103 AVIALPGGCGTLEELLEIITWKQL---GLYLN-PIVILNTNGFFDPLMEMLENAIE-GNF 157
Query: 101 AKDEVASLWKICDSNSEAL 119
+ + +W + + EA+
Sbjct: 158 MRKQHGDIWHVAHTPEEAV 176
>gi|145589540|ref|YP_001156137.1| hypothetical protein Pnuc_1359 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047946|gb|ABP34573.1| conserved hypothetical protein 730 [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 285
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+VA PGG G+ DE+FE+L L+Q ++ LP+P +++ +++++++F E +G +
Sbjct: 203 AIVAYPGGFGSFDELFEVLTLMQTHKV---LPIPVILVG-AGYWREMINFKRMVE-FGVI 257
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLS 129
+ ++ ++ ++ EA + ++Y L
Sbjct: 258 DEADMQTI-HFVETAPEAWKIIKDWYQLG 285
>gi|421562504|ref|ZP_16008331.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM2795]
gi|402343160|gb|EJU78315.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM2795]
Length = 210
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V +PGG GTLDE+FEIL L+Q ++ P P +++ +F+ L +++ +
Sbjct: 125 AYVVMPGGFGTLDELFEILTLVQTGKV---PPRPIVLVG-KAFWSGLAEWINAQLLARGL 180
Query: 101 AKDEVASLWKICDSNSEALSYLAE 124
+ SL+ I D E ++YL+E
Sbjct: 181 ISEGAVSLFAISDDEDEIVAYLSE 204
>gi|398804543|ref|ZP_10563536.1| TIGR00730 family protein [Polaromonas sp. CF318]
gi|398093540|gb|EJL83918.1| TIGR00730 family protein [Polaromonas sp. CF318]
Length = 287
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDE+FE++ L+Q + PVP ++ S++K+LL+ E+ G +
Sbjct: 206 ALVVFPGGFGTLDELFEVITLVQTRKAK---PVPIILFG-SSYWKRLLNTEMLVEE-GVI 260
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ +++ L++ D A + +FY L
Sbjct: 261 SPNDL-KLFQYVDDPQVAWDLIKDFYRL 287
>gi|15676207|ref|NP_273339.1| hypothetical protein NMB0283 [Neisseria meningitidis MC58]
gi|121634162|ref|YP_974407.1| hypothetical protein NMC0289 [Neisseria meningitidis FAM18]
gi|254805675|ref|YP_003083896.1| putative nucl protein [Neisseria meningitidis alpha14]
gi|304389113|ref|ZP_07371155.1| methionyl-tRNA formyltransferase [Neisseria meningitidis ATCC
13091]
gi|385323427|ref|YP_005877866.1| hypothetical protein NMV_0309 [Neisseria meningitidis 8013]
gi|385338819|ref|YP_005892692.1| hypothetical protein NMAA_1697 [Neisseria meningitidis WUE 2594]
gi|385339324|ref|YP_005893196.1| hypothetical protein NMBG2136_0284 [Neisseria meningitidis G2136]
gi|385342683|ref|YP_005896554.1| hypothetical protein NMBM01240149_1803 [Neisseria meningitidis
M01-240149]
gi|385850545|ref|YP_005897060.1| hypothetical protein NMBM04240196_0290 [Neisseria meningitidis
M04-240196]
gi|385852483|ref|YP_005898997.1| hypothetical protein NMBH4476_0278 [Neisseria meningitidis H44/76]
gi|385856423|ref|YP_005902935.1| hypothetical protein NMBNZ0533_0285 [Neisseria meningitidis
NZ-05/33]
gi|416159370|ref|ZP_11605833.1| hypothetical protein TIGR00730 [Neisseria meningitidis N1568]
gi|416179710|ref|ZP_11611146.1| hypothetical protein TIGR00730 [Neisseria meningitidis M6190]
gi|416190115|ref|ZP_11615595.1| hypothetical protein TIGR00730 [Neisseria meningitidis ES14902]
gi|416194995|ref|ZP_11617576.1| hypothetical protein TIGR00730 [Neisseria meningitidis CU385]
gi|416211861|ref|ZP_11621563.1| hypothetical protein TIGR00730 [Neisseria meningitidis M01-240013]
gi|421539481|ref|ZP_15985642.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 93004]
gi|421541626|ref|ZP_15987743.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM255]
gi|421543684|ref|ZP_15989775.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM140]
gi|421545745|ref|ZP_15991805.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM183]
gi|421547812|ref|ZP_15993844.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM2781]
gi|421552024|ref|ZP_15998005.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM576]
gi|421554030|ref|ZP_15999981.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 98008]
gi|421556278|ref|ZP_16002195.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 80179]
gi|421560444|ref|ZP_16006303.1| putative lysine decarboxylase family protein [Neisseria
meningitidis NM2657]
gi|421564496|ref|ZP_16010295.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM3081]
gi|421566713|ref|ZP_16012455.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM3001]
gi|427827019|ref|ZP_18994064.1| possible lysine decarboxylase family protein [Neisseria
meningitidis H44/76]
gi|433466397|ref|ZP_20423860.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 87255]
gi|433468518|ref|ZP_20425955.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 98080]
gi|433472663|ref|ZP_20430033.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 97021]
gi|433481087|ref|ZP_20438359.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 2006087]
gi|433483209|ref|ZP_20440447.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 2002038]
gi|433485310|ref|ZP_20442516.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 97014]
gi|433491790|ref|ZP_20448891.1| putative lysine decarboxylase family protein [Neisseria
meningitidis NM586]
gi|433493877|ref|ZP_20450953.1| putative lysine decarboxylase family protein [Neisseria
meningitidis NM762]
gi|433495994|ref|ZP_20453043.1| putative lysine decarboxylase family protein [Neisseria
meningitidis M7089]
gi|433498089|ref|ZP_20455105.1| putative lysine decarboxylase family protein [Neisseria
meningitidis M7124]
gi|433500070|ref|ZP_20457061.1| putative lysine decarboxylase family protein [Neisseria
meningitidis NM174]
gi|433503610|ref|ZP_20460565.1| putative lysine decarboxylase family protein [Neisseria
meningitidis NM126]
gi|433506326|ref|ZP_20463245.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 9757]
gi|433508360|ref|ZP_20465246.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 12888]
gi|433510543|ref|ZP_20467386.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 4119]
gi|7225508|gb|AAF40736.1| conserved hypothetical protein [Neisseria meningitidis MC58]
gi|120865868|emb|CAM09601.1| conserved hypothetical protein [Neisseria meningitidis FAM18]
gi|254669217|emb|CBA08031.1| putative nucl protein [Neisseria meningitidis alpha14]
gi|254671552|emb|CBA09183.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
gi|261391814|emb|CAX49269.1| conserved hypothetical protein [Neisseria meningitidis 8013]
gi|304336912|gb|EFM03104.1| methionyl-tRNA formyltransferase [Neisseria meningitidis ATCC
13091]
gi|316985220|gb|EFV64172.1| possible lysine decarboxylase family protein [Neisseria
meningitidis H44/76]
gi|319411233|emb|CBY91640.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594]
gi|325128993|gb|EGC51844.1| hypothetical protein TIGR00730 [Neisseria meningitidis N1568]
gi|325131572|gb|EGC54279.1| hypothetical protein TIGR00730 [Neisseria meningitidis M6190]
gi|325139173|gb|EGC61719.1| hypothetical protein TIGR00730 [Neisseria meningitidis ES14902]
gi|325141120|gb|EGC63623.1| hypothetical protein TIGR00730 [Neisseria meningitidis CU385]
gi|325145222|gb|EGC67502.1| hypothetical protein TIGR00730 [Neisseria meningitidis M01-240013]
gi|325197568|gb|ADY93024.1| conserved hypothetical protein TIGR00730 [Neisseria meningitidis
G2136]
gi|325199487|gb|ADY94942.1| conserved hypothetical protein TIGR00730 [Neisseria meningitidis
H44/76]
gi|325202889|gb|ADY98343.1| conserved hypothetical protein TIGR00730 [Neisseria meningitidis
M01-240149]
gi|325205368|gb|ADZ00821.1| conserved hypothetical protein TIGR00730 [Neisseria meningitidis
M04-240196]
gi|325207312|gb|ADZ02764.1| conserved hypothetical protein TIGR00730 [Neisseria meningitidis
NZ-05/33]
gi|389604919|emb|CCA43845.1| UPF0717 protein yvdD [Neisseria meningitidis alpha522]
gi|402319995|gb|EJU55499.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM255]
gi|402321466|gb|EJU56940.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 93004]
gi|402325973|gb|EJU61380.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM183]
gi|402326526|gb|EJU61928.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM140]
gi|402327832|gb|EJU63219.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM2781]
gi|402332940|gb|EJU68258.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM576]
gi|402334066|gb|EJU69361.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 98008]
gi|402338131|gb|EJU73370.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 80179]
gi|402340617|gb|EJU75817.1| putative lysine decarboxylase family protein [Neisseria
meningitidis NM2657]
gi|402344913|gb|EJU80044.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM3001]
gi|402346093|gb|EJU81197.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NM3081]
gi|432205185|gb|ELK61216.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 87255]
gi|432206604|gb|ELK62611.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 98080]
gi|432212547|gb|ELK68485.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 97021]
gi|432219440|gb|ELK75287.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 2006087]
gi|432223655|gb|ELK79435.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 2002038]
gi|432224770|gb|ELK80533.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 97014]
gi|432230671|gb|ELK86345.1| putative lysine decarboxylase family protein [Neisseria
meningitidis NM586]
gi|432232055|gb|ELK87710.1| putative lysine decarboxylase family protein [Neisseria
meningitidis NM762]
gi|432236856|gb|ELK92460.1| putative lysine decarboxylase family protein [Neisseria
meningitidis M7124]
gi|432237636|gb|ELK93229.1| putative lysine decarboxylase family protein [Neisseria
meningitidis M7089]
gi|432237782|gb|ELK93373.1| putative lysine decarboxylase family protein [Neisseria
meningitidis NM174]
gi|432238812|gb|ELK94375.1| putative lysine decarboxylase family protein [Neisseria
meningitidis NM126]
gi|432244342|gb|ELK99837.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 9757]
gi|432250011|gb|ELL05409.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 12888]
gi|432250611|gb|ELL06004.1| putative lysine decarboxylase family protein [Neisseria
meningitidis 4119]
Length = 210
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V +PGG GTLDE+FEIL L+Q ++ P P +++ +F+ L +++ +
Sbjct: 125 AYVVMPGGFGTLDELFEILTLVQTGKV---PPRPIVLVG-KAFWSGLAEWINAQLLARGL 180
Query: 101 AKDEVASLWKICDSNSEALSYLAE 124
+ SL+ I D E ++YL+E
Sbjct: 181 ISEGAVSLFAISDDEDEIVAYLSE 204
>gi|406662146|ref|ZP_11070250.1| LOG family protein yvdD [Cecembia lonarensis LW9]
gi|405553931|gb|EKB49081.1| LOG family protein yvdD [Cecembia lonarensis LW9]
Length = 190
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 43 VALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAK 102
+A+PGG+GT +E+FEI+ L QL I P + N + +Y LL FL G + +
Sbjct: 102 IAMPGGIGTFEELFEIMTLNQLAYIRK----PLALFNVNGYYDGLLQFLQHAVKEGFLHQ 157
Query: 103 DEVASLWKICDSNSEALSYLAEF 125
++ L + D+ SE L + F
Sbjct: 158 AQL-DLLIVSDNPSELLDKMTAF 179
>gi|237839445|ref|XP_002369020.1| lysine decarboxylase domain-containing protein [Toxoplasma gondii
ME49]
gi|211966684|gb|EEB01880.1| lysine decarboxylase domain-containing protein [Toxoplasma gondii
ME49]
Length = 397
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F RK ++ A+ V+ PGGVGTLDE+ E+L L Q ++ ++P+
Sbjct: 252 EFHYFFTRKFWMVYSAL--------GVIVAPGGVGTLDELMEVLTLKQSGKMKRDIPI-- 301
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
V+ F+K ++ F ++G V++ + L+ D N EA YL +F
Sbjct: 302 -VLFGKQFWKDIICF-DKLVEYGVVSEKDRDQLFYTDDEN-EAFEYLKQF 348
>gi|146420554|ref|XP_001486232.1| hypothetical protein PGUG_01903 [Meyerozyma guilliermondii ATCC
6260]
gi|146389647|gb|EDK37805.1| hypothetical protein PGUG_01903 [Meyerozyma guilliermondii ATCC
6260]
Length = 225
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 38 DRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDW 97
+ A VALPGG GTL+E+ E++ QL P ++ N D FY L F+ D +
Sbjct: 129 EANAFVALPGGYGTLEELMEVVTWSQLNIHNK----PIVLYNLDGFYDNFLKFINDAIES 184
Query: 98 GTVAKDEVASLWKICDSNSEALSYLAEF 125
G V+K + K+ + E + + E+
Sbjct: 185 GFVSKKN-GEIIKVASTVDELIKAIEEY 211
>gi|241663634|ref|YP_002981994.1| hypothetical protein Rpic12D_2043 [Ralstonia pickettii 12D]
gi|240865661|gb|ACS63322.1| conserved hypothetical protein [Ralstonia pickettii 12D]
Length = 317
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
A + +PGG GTLDE+ E+L L+Q G VP ++M F+K LLD F G
Sbjct: 218 AFIVMPGGFGTLDELAEVLTLVQ---TGKSRSVP-VIMFGSHFWKGLLDWFRFTLLPMGL 273
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYD 127
+A+ ++ + +I D +AL + EFY+
Sbjct: 274 IAEHDL-DIMRIVDEPKDALDAVYEFYE 300
>gi|149928110|ref|ZP_01916357.1| hypothetical protein LMED105_15214 [Limnobacter sp. MED105]
gi|149823196|gb|EDM82433.1| hypothetical protein LMED105_15214 [Limnobacter sp. MED105]
Length = 245
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 22/123 (17%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ R F ARK A +A V +PGG GTLDEMFE L LIQ + G +P+
Sbjct: 128 LTFRHFFARKVAFAKYA--------SAYVVMPGGFGTLDEMFEALTLIQTNK-GRRIPI- 177
Query: 75 FLVMNYDSFYKKLLDF-----LGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
++ F+ L+D+ LG+ G ++ ++ L+++ ++ E L + FY+
Sbjct: 178 --ILVGSKFWAGLIDWVKSHLLGE----GMISPGDM-DLFEVVETPEEVLKCIFHFYEKR 230
Query: 130 SID 132
+ +
Sbjct: 231 TFN 233
>gi|451979622|ref|ZP_21928037.1| conserved hypothetical protein [Nitrospina gracilis 3/211]
gi|451763150|emb|CCQ89234.1| conserved hypothetical protein [Nitrospina gracilis 3/211]
Length = 346
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 68/133 (51%), Gaps = 15/133 (11%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+ +L+ ++F RK I + A V PGG GTLDE FE L L Q G
Sbjct: 152 DPKLMSFKYFFTRKLFFIK--------ESDATVLFPGGFGTLDEGFENLTLFQ---TGKT 200
Query: 71 LPVPFLVMNY--DSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
P P ++ + D+++++ ++ + D G +++ ++ SL+KI + E + Y+ ++Y
Sbjct: 201 EPRPIVLADAEDDTYWQRWEAYVQNELLDNGYISEADL-SLFKIVKTVEEGVDYILDYYT 259
Query: 128 LSSIDKRVHEVNL 140
+ + VH++ +
Sbjct: 260 VYHSFRYVHDITV 272
>gi|383782521|ref|YP_005467088.1| hypothetical protein AMIS_73520 [Actinoplanes missouriensis 431]
gi|381375754|dbj|BAL92572.1| hypothetical protein AMIS_73520 [Actinoplanes missouriensis 431]
Length = 257
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D R+F RK + A A V LPGG GTLDE+FE + L+Q +++ + PV
Sbjct: 150 IDFRYFFVRKTMFVKYA--------QAFVVLPGGFGTLDELFEAITLVQTKKV-TRFPVI 200
Query: 75 FLVMNYDSFYKKLLDFL 91
+ + Y + LLD++
Sbjct: 201 LMGVEY---WGGLLDWM 214
>gi|320162969|gb|EFW39868.1| decarboxylase [Capsaspora owczarzaki ATCC 30864]
Length = 207
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
VVALPGG GT +E+ E L+ +L I S P ++ N D FY L+ L +
Sbjct: 110 GVVALPGGAGTFEELMEALSWKKLGIIDS----PIVLFNLDGFYDPLIAMLDRAAQENFL 165
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVHEVNLK 141
A LW++ + E L + + ++ +VH N+
Sbjct: 166 AVAPERPLWRVATTVPEILEII---HSEQAVGMKVHPNNVP 203
>gi|196228692|ref|ZP_03127558.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
gi|196226973|gb|EDY21477.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
Length = 161
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 43 VALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWG 98
VALPGG+GTL+E+FE +QL G L P ++N D FY LL FL D G
Sbjct: 69 VALPGGIGTLEEIFEAFTWLQL---GLHLK-PVGLLNVDGFYDTLLQFLDQTRDRG 120
>gi|320103647|ref|YP_004179238.1| hypothetical protein Isop_2109 [Isosphaera pallida ATCC 43644]
gi|319750929|gb|ADV62689.1| Conserved hypothetical protein CHP00730 [Isosphaera pallida ATCC
43644]
Length = 344
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 12/112 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + + V LPGG GTLDE+FE L L+Q +I P
Sbjct: 209 INFRYFFVRKTMFVKYS--------NGFVILPGGFGTLDELFEALTLVQTRKIHR---FP 257
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
++M D ++K LLD++ + + E +L + ++ +EA + E Y
Sbjct: 258 IVLMGRD-YWKGLLDWVETTQLGTGMISPEDLNLLIVVETAAEARDAILECY 308
>gi|254431170|ref|ZP_05044873.1| decarboxylase family protein [Cyanobium sp. PCC 7001]
gi|197625623|gb|EDY38182.1| decarboxylase family protein [Cyanobium sp. PCC 7001]
Length = 352
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 11/123 (8%)
Query: 5 KVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQL 64
V+ +L+ R+F RK + + A+V LPGG GTLDE+FE L LIQ
Sbjct: 150 PVVSSCNGRLLHFRYFFTRKLFFLR--------ESDALVVLPGGFGTLDELFESLTLIQT 201
Query: 65 ERIGSELPVPFLVMNYDSFYKKLLDF-LGDCEDWGTVAKDEVASLWKICDSNSEALSYLA 123
R +P+ L D F+ + L G ++ ++ +SL + S EA+ +
Sbjct: 202 GRT-PPMPLVLLAPPDDPFWLSWHEHSLATMRQRGLISPED-SSLLFLTQSAREAMEQIG 259
Query: 124 EFY 126
FY
Sbjct: 260 RFY 262
>gi|340621926|ref|YP_004740378.1| hypothetical protein Ccan_11550 [Capnocytophaga canimorsus Cc5]
gi|339902192|gb|AEK23271.1| UPF0717 protein YJL055W [Capnocytophaga canimorsus Cc5]
Length = 229
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 62/114 (54%), Gaps = 15/114 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ +F ARK + + A V +PGG GT+DE+FE + LIQ ++I + P+
Sbjct: 120 LNFDYFFARKVMFVKYS--------QAFVVMPGGFGTMDELFEAITLIQTQKI-DKFPI- 169
Query: 75 FLVMNYDSFYKKLLDFLGDC--EDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
++ F+K L+D+ +++ ++ +++ L+K+ D+ E + + +FY
Sbjct: 170 --ILVGSEFWKGLVDWFQKTLLDEFQNISPEDMF-LFKVVDTADEVVDIIEKFY 220
>gi|443621828|ref|ZP_21106375.1| putative Beta-ketoacyl synthase [Streptomyces viridochromogenes
Tue57]
gi|443344650|gb|ELS58745.1| putative Beta-ketoacyl synthase [Streptomyces viridochromogenes
Tue57]
Length = 511
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A VALPGG+GT +E+ E+L+ QL RI + P L+++ FY+ LL FL + G +
Sbjct: 102 AFVALPGGLGTAEELLEVLSWAQL-RIHRK---PCLLLDPFGFYRPLLSFLEHAREEGFL 157
Query: 101 AKDEVASLWKICDSNSEALSYL 122
++ + +C+S E +++L
Sbjct: 158 HPGDLERI-VVCESAEEVVAHL 178
>gi|33866479|ref|NP_898038.1| hypothetical protein SYNW1947 [Synechococcus sp. WH 8102]
gi|33633257|emb|CAE08462.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length = 298
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 14/106 (13%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
+FS RK + +V + PGG GTLDE+FE+L L Q +G++ +P +
Sbjct: 197 FNYFSLRKFHFVMRSV--------GAILFPGGFGTLDELFELLTLRQ---VGTKGRMPIV 245
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
+ + F+ KL+DF E G ++ D++A L + D+ EA Y+
Sbjct: 246 LFGTE-FWTKLVDFDYLAES-GLISNDDLA-LIRFSDTAEEAWEYI 288
>gi|383828870|ref|ZP_09983959.1| TIGR00730 family protein [Saccharomonospora xinjiangensis XJ-54]
gi|383461523|gb|EID53613.1| TIGR00730 family protein [Saccharomonospora xinjiangensis XJ-54]
Length = 260
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK + A A + LPGG GTLDE+FE L L+Q +++ ++ PV
Sbjct: 154 VNFRYFFARKTMFVKYA--------QAFICLPGGFGTLDELFEALTLVQTKKV-TKFPV- 203
Query: 75 FLVMNYDSFYKKLLDFL 91
V+ S++ L D++
Sbjct: 204 --VLFGSSYWGGLYDWV 218
>gi|410027681|ref|ZP_11277517.1| hypothetical protein MaAK2_00710 [Marinilabilia sp. AK2]
Length = 252
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A + +PGG GTLDE FE L LIQ ++ + PV V+ F++ L +++ D+GT+
Sbjct: 149 AFIVMPGGFGTLDEFFEALTLIQ-TKVMRKFPV---VLMCSDFHESLYEYIQHMADYGTI 204
Query: 101 AKDEVASLWKICDSNSEALSYLAEF 125
K ++ L+ + DS E ++ ++
Sbjct: 205 DKKDL-DLFLLTDSIDEMEKHIRKY 228
>gi|384564596|ref|ZP_10011700.1| TIGR00730 family protein [Saccharomonospora glauca K62]
gi|384520450|gb|EIE97645.1| TIGR00730 family protein [Saccharomonospora glauca K62]
Length = 257
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK + A A + LPGG GTLDE+FE L L+Q +++ ++ PV
Sbjct: 151 VNFRYFFARKTMFVKYA--------QAFICLPGGFGTLDELFEALTLVQTKKV-TKFPV- 200
Query: 75 FLVMNYDSFYKKLLDFL 91
V+ S++ L D++
Sbjct: 201 --VLFGSSYWGGLYDWI 215
>gi|84494668|ref|ZP_00993787.1| hypothetical protein JNB_07719 [Janibacter sp. HTCC2649]
gi|84384161|gb|EAQ00041.1| hypothetical protein JNB_07719 [Janibacter sp. HTCC2649]
Length = 276
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 18/131 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK + + + LPGG GTLDE+FE + L+Q ++ S P
Sbjct: 161 VNFRYFFARKTMFVKYS--------QGFIVLPGGFGTLDELFEAITLVQTRKVTS---FP 209
Query: 75 FLVMNYDSFYKKLLDFLGDCE-DWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
++M ++++ LLD+L GT++ ++ SL + D EA++ + S +
Sbjct: 210 IILMG-TAYWQGLLDWLQSSALAAGTISAKDL-SLITLTDDVEEAVAAIV----TSDRAR 263
Query: 134 RVHEVNLKSTH 144
H TH
Sbjct: 264 ASHAAKGSGTH 274
>gi|335425026|ref|ZP_08554017.1| hypothetical protein SSPSH_20026 [Salinisphaera shabanensis E1L3A]
gi|334886702|gb|EGM25049.1| hypothetical protein SSPSH_20026 [Salinisphaera shabanensis E1L3A]
Length = 246
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 60/109 (55%), Gaps = 14/109 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ ++F RK ++ A A++ PGG GT+DE+FE+L LIQ G + +P
Sbjct: 138 EFKYFFMRKFWFMNVA--------KALIIFPGGFGTMDELFEMLTLIQ---TGKQPRIP- 185
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
+V+ +F+++L++F E G +A+ ++ ++ DS EA +L +
Sbjct: 186 VVLYGKNFWERLINFDVFVE-MGLIAERDIDLFYR-ADSVDEAFDFLTD 232
>gi|315656375|ref|ZP_07909264.1| methionyl-tRNA formyltransferase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315492934|gb|EFU82536.1| methionyl-tRNA formyltransferase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 269
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 14/109 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A A VALPGG GTLDE+FE + L Q +I P
Sbjct: 166 VEFRYFFVRKTMFVKYA--------QAFVALPGGFGTLDELFECVTLRQTSKIQQ---YP 214
Query: 75 FLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALSYL 122
+++ +D F+ LL ++ G V+ DEV + ++ ++ +EAL+ +
Sbjct: 215 IVLVGHD-FWDGLLGWVRQHLVAEGMVSPDEV-EIIQVVETAAEALAAI 261
>gi|255546819|ref|XP_002514468.1| conserved hypothetical protein [Ricinus communis]
gi|223546464|gb|EEF47964.1| conserved hypothetical protein [Ricinus communis]
Length = 61
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL-SSIDKRV 135
+MNYDSF + WGTV+K +V L KIC+S+ EAL+ L +FY+L SS ++
Sbjct: 1 MMNYDSFLTVGI--------WGTVSKGQVTPLRKICNSSFEALACLTDFYNLHSSSNEDR 52
Query: 136 HEVNLKSTH 144
H S+H
Sbjct: 53 HGRKTTSSH 61
>gi|218780535|ref|YP_002431853.1| hypothetical protein Dalk_2693 [Desulfatibacillum alkenivorans
AK-01]
gi|218761919|gb|ACL04385.1| conserved hypothetical protein [Desulfatibacillum alkenivorans
AK-01]
Length = 216
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ +F RK + A+ A V +PGG GTLDE+FE + LIQ RI P P
Sbjct: 115 MNFNYFFVRKVMFVKYAL--------AYVGMPGGFGTLDELFEAVTLIQTHRIK---PFP 163
Query: 75 FLVMNYDSFYKKLLDFLGD 93
++M D ++ L+D++ D
Sbjct: 164 VVLMGSD-YWTGLMDWIKD 181
>gi|145219551|ref|YP_001130260.1| hypothetical protein Cvib_0743 [Chlorobium phaeovibrioides DSM 265]
gi|145205715|gb|ABP36758.1| conserved hypothetical protein 730 [Chlorobium phaeovibrioides DSM
265]
Length = 188
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A + LPGG+GTLDE+ E++ L P +++N + F+ LL+F G + V
Sbjct: 101 AYLVLPGGLGTLDELLEVMTWKHL----GHHHKPIILLNLNGFWNPLLEFFGRIAEERMV 156
Query: 101 AKDEVASLWKICDSNSEALSYL 122
+ IC+S EA S L
Sbjct: 157 -NSRYKDYYTICNSTEEAASLL 177
>gi|337290452|ref|YP_004629473.1| hypothetical protein CULC22_00841 [Corynebacterium ulcerans
BR-AD22]
gi|397653688|ref|YP_006494371.1| hypothetical protein CULC0102_0937 [Corynebacterium ulcerans 0102]
gi|334698758|gb|AEG83554.1| hypothetical protein CULC22_00841 [Corynebacterium ulcerans
BR-AD22]
gi|393402644|dbj|BAM27136.1| hypothetical protein CULC0102_0937 [Corynebacterium ulcerans 0102]
Length = 263
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 14/107 (13%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R+F ARK + + A V LPGG+GTLDE+FE+L ++Q ++ + P+
Sbjct: 152 FRYFFARKTMFLKYS--------QAFVCLPGGLGTLDELFEVLCMVQTGKV-TNFPI--- 199
Query: 77 VMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALSYL 122
V+ + F+ ++++L D G +A+ +V L+ + DS EA++++
Sbjct: 200 VLLGEGFWGGMVEWLKDRLVAEGMIAEKDV-DLFLVTDSVEEAVAHI 245
>gi|255324446|ref|ZP_05365563.1| lysine decarboxylase family protein [Corynebacterium
tuberculostearicum SK141]
gi|255298352|gb|EET77652.1| lysine decarboxylase family protein [Corynebacterium
tuberculostearicum SK141]
Length = 254
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 64/123 (52%), Gaps = 13/123 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + A + LPGG+GT+DE FE++ ++Q ++ + P
Sbjct: 143 LNFRYFFARKTMFLKYS--------QAFICLPGGMGTMDEFFEVMCMVQTGKVTN---YP 191
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
++M + ++ LL+++ + L+ + D EAL+++ + + + S DKR
Sbjct: 192 IVLMGTE-YWSGLLEWMEKTLAASGYINEGDRELFLLTDDPDEALAHIIQRHQVMS-DKR 249
Query: 135 VHE 137
+ E
Sbjct: 250 IRE 252
>gi|206562149|ref|YP_002232912.1| putative lysine decarboxylase [Burkholderia cenocepacia J2315]
gi|444362798|ref|ZP_21163296.1| TIGR00730 family protein [Burkholderia cenocepacia BC7]
gi|444370289|ref|ZP_21169971.1| TIGR00730 family protein [Burkholderia cenocepacia K56-2Valvano]
gi|198038189|emb|CAR54142.1| putative lysine decarboxylase [Burkholderia cenocepacia J2315]
gi|443596254|gb|ELT64773.1| TIGR00730 family protein [Burkholderia cenocepacia BC7]
gi|443597808|gb|ELT66218.1| TIGR00730 family protein [Burkholderia cenocepacia K56-2Valvano]
Length = 335
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 59/108 (54%), Gaps = 14/108 (12%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I P+P +++
Sbjct: 222 YFAIRKLHLLERA--------KAAVFFPGGYGTFDELFEVLTLLQTRKIA---PLPVILV 270
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
++++++ +D L D G + + ++ L+ C+S ++ + +Y
Sbjct: 271 G-EAYWRRAVD-LAFLADEGMIDRRDL-ELFTYCESAAQIWHAIGSWY 315
>gi|441500066|ref|ZP_20982236.1| hypothetical protein C900_04919 [Fulvivirga imtechensis AK7]
gi|441436157|gb|ELR69531.1| hypothetical protein C900_04919 [Fulvivirga imtechensis AK7]
Length = 262
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 21/119 (17%)
Query: 13 QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELP 72
+L+ +F RK + + + +PGG GTLDE+FE L LIQ ++IG + P
Sbjct: 151 KLITFDYFFVRKVMFVKYS--------QGFIVMPGGFGTLDELFEALTLIQTKKIG-KFP 201
Query: 73 VPFLVMNYDSFYKKLLDF-----LGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+ V+ ++ L+D+ L C + +E L+K+ ++ +EA+ + +FY
Sbjct: 202 I---VLVGKEYWGGLIDWIKTTMLQACNN----VHEEDLKLFKVVETEAEAVEAIDDFY 253
>gi|395799645|ref|ZP_10478925.1| lysine decarboxylase family protein [Pseudomonas sp. Ag1]
gi|421142841|ref|ZP_15602807.1| hypothetical protein MHB_25826 [Pseudomonas fluorescens BBc6R8]
gi|395336150|gb|EJF68011.1| lysine decarboxylase family protein [Pseudomonas sp. Ag1]
gi|404506024|gb|EKA20028.1| hypothetical protein MHB_25826 [Pseudomonas fluorescens BBc6R8]
Length = 195
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A +ALPGG+GTL+E+FE+ QL G P ++ + FY+KL DFL G V
Sbjct: 102 AFIALPGGLGTLEELFEVWTWGQLGYHGK----PLGLLEVNGFYRKLTDFLDHIVGEGFV 157
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
A L ++ +S +E L L + L
Sbjct: 158 RAPHRAML-QMSESPAELLDVLDAWQPL 184
>gi|338708416|ref|YP_004662617.1| hypothetical protein Zymop_1437 [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
gi|336295220|gb|AEI38327.1| conserved hypothetical protein [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
Length = 291
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A PGG GTLDE+FE+L LI +RI PVP L +F++K+++F E+ G +
Sbjct: 200 AFAIFPGGFGTLDEVFELLTLIHTKRIE---PVPILFYG-RAFWEKIVNFEALAEE-GMI 254
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVH 136
+K ++ ++ ++ E + F+ + RVH
Sbjct: 255 SKKDL-DFFQFVETAEEGWEIIRNFWK-NDQTGRVH 288
>gi|149201026|ref|ZP_01878001.1| decarboxylase family protein [Roseovarius sp. TM1035]
gi|149145359|gb|EDM33385.1| decarboxylase family protein [Roseovarius sp. TM1035]
Length = 271
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDEMFE L LIQ +R+ VPFL+ +F++ ++++ E GT+
Sbjct: 190 AICVFPGGFGTLDEMFEALTLIQTDRMKR---VPFLLFGA-TFWQSIINWEALSEA-GTI 244
Query: 101 AKDEVASLWKICDSNSEALSYL 122
+ +++ L++ ++ EA+ +
Sbjct: 245 SAEDL-DLFQFVETADEAMQII 265
>gi|296135594|ref|YP_003642836.1| hypothetical protein Tint_1116 [Thiomonas intermedia K12]
gi|295795716|gb|ADG30506.1| conserved hypothetical protein [Thiomonas intermedia K12]
Length = 295
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 16/111 (14%)
Query: 17 LRFFSARK-HGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
R+F+ RK H L+ A+VA PGG GTLDE+FE+L L+Q ++ + +P+
Sbjct: 188 FRYFALRKMHFLLRA---------RALVAFPGGYGTLDELFEVLTLVQTGKM-ARIPI-- 235
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
V+ F+++ +DF ++ A+D L+ DS + ++ L F+
Sbjct: 236 -VLVGSEFWRRAVDFDYLVDEGFISAEDR--GLFTRVDSAEDIVTILETFH 283
>gi|319955266|ref|YP_004166533.1| hypothetical protein [Cellulophaga algicola DSM 14237]
gi|319423926|gb|ADV51035.1| Conserved hypothetical protein CHP00730 [Cellulophaga algicola DSM
14237]
Length = 228
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL-GDCEDWGT 99
V +PGG GTLDE+FE + LIQ +I + P+ ++ F+ L+D++ G GT
Sbjct: 138 GFVVMPGGFGTLDELFEAITLIQTNKI-EKFPI---ILVGTEFWTGLMDWIKGTMLTMGT 193
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFY 126
++ ++ L KI D+ E + + FY
Sbjct: 194 ISAKDL-DLIKIVDTKEEVVDIIDSFY 219
>gi|94496036|ref|ZP_01302615.1| hypothetical protein SKA58_15677 [Sphingomonas sp. SKA58]
gi|94424728|gb|EAT09750.1| hypothetical protein SKA58_15677 [Sphingomonas sp. SKA58]
Length = 301
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDF 90
A+ PGG GT DEMFE+L LIQ G P+P L+ D F+ +++DF
Sbjct: 214 ALAVFPGGFGTFDEMFELLTLIQ---TGKMKPIPILLYGRD-FWNRVVDF 259
>gi|377574190|ref|ZP_09803221.1| hypothetical protein MOPEL_073_00260 [Mobilicoccus pelagius NBRC
104925]
gi|377536993|dbj|GAB48386.1| hypothetical protein MOPEL_073_00260 [Mobilicoccus pelagius NBRC
104925]
Length = 247
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 14/106 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A + LPGG GT DE+FE L L+Q +++ + PV
Sbjct: 139 VNFRYFFIRKTMFVKHA--------EGFIVLPGGFGTFDELFEALTLVQTKKV-TSFPV- 188
Query: 75 FLVMNYDSFYKKLLDFLGDCE-DWGTVAKDEVASLWKICDSNSEAL 119
V+ +++ LLD+L D GT+ +V L + D +EA+
Sbjct: 189 --VLIGTEYWQGLLDWLRDVAVPAGTIGAADV-DLIHVTDDPAEAV 231
>gi|374367614|ref|ZP_09625675.1| hypothetical protein OR16_17387 [Cupriavidus basilensis OR16]
gi|373100917|gb|EHP41977.1| hypothetical protein OR16_17387 [Cupriavidus basilensis OR16]
Length = 239
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
A + +PGG GTLDE+ E+L L+Q G VP +V+ F+K LLD F G
Sbjct: 140 AFIVMPGGFGTLDELAEVLTLVQ---TGKSRSVP-VVLFGSRFWKGLLDWFRFTLLPMGL 195
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 135
+A+ ++ L KI D E L + E+Y+ D +
Sbjct: 196 IAEHDL-DLMKIVDEPHEVLEAVYEYYEQRGGDNPI 230
>gi|145596262|ref|YP_001160559.1| hypothetical protein Strop_3750 [Salinispora tropica CNB-440]
gi|145305599|gb|ABP56181.1| conserved hypothetical protein 730 [Salinispora tropica CNB-440]
Length = 181
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGD 93
A +ALPGG+GTLDE+FE+ L P +++ D FY+ LLD+LGD
Sbjct: 100 AFLALPGGLGTLDELFEVWTTATLTLHSK----PMTLVDADGFYRPLLDWLGD 148
>gi|186475860|ref|YP_001857330.1| hypothetical protein Bphy_1095 [Burkholderia phymatum STM815]
gi|184192319|gb|ACC70284.1| conserved hypothetical protein [Burkholderia phymatum STM815]
Length = 275
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 12/74 (16%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
L +F+ RK L++ A A V PGG GT DE+FE+L L+Q ++I P+P +
Sbjct: 173 LHYFAIRKLHLLERA--------RAAVFFPGGFGTCDELFEVLTLLQTQKIK---PLPVV 221
Query: 77 VMNYDSFYKKLLDF 90
++ +S++++ +DF
Sbjct: 222 LVG-ESYWRRAIDF 234
>gi|386852563|ref|YP_006270576.1| hypothetical protein ACPL_7628 [Actinoplanes sp. SE50/110]
gi|359840067|gb|AEV88508.1| hypothetical protein ACPL_7628 [Actinoplanes sp. SE50/110]
Length = 255
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D R+F RK + A A V LPGG GTLDE+FE + L+Q ++ P
Sbjct: 150 IDFRYFFVRKTMFVKYA--------QAFVVLPGGFGTLDELFEAITLVQTRKVTR---FP 198
Query: 75 FLVMNYDSFYKKLLDFL 91
++M D ++ LLD++
Sbjct: 199 VILMGVD-YWSGLLDWI 214
>gi|441520850|ref|ZP_21002514.1| hypothetical protein GSI01S_10_00670 [Gordonia sihwensis NBRC
108236]
gi|441459422|dbj|GAC60475.1| hypothetical protein GSI01S_10_00670 [Gordonia sihwensis NBRC
108236]
Length = 178
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 11/83 (13%)
Query: 43 VALPGGVGTLDEMFEILALIQLERIGSELPV---PFLVMNYDSFYKKLLDFLGDCEDWGT 99
+ LPGG+GT +E+FE G+ L V P +++N++ FY L+ +L D G
Sbjct: 101 ITLPGGIGTFEELFETW-------TGAYLGVHDKPIVLLNHEGFYDPLIGWLDDLAARGF 153
Query: 100 VAKDEVASLWKICDSNSEALSYL 122
VA + L K+C + ++++YL
Sbjct: 154 VADQALGKL-KVCATVGDSIAYL 175
>gi|410473539|ref|YP_006896820.1| hypothetical protein BN117_2993 [Bordetella parapertussis Bpp5]
gi|408443649|emb|CCJ50326.1| putative exported protein [Bordetella parapertussis Bpp5]
Length = 190
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 16/127 (12%)
Query: 4 PKVLCKQESQLVDLRF--FSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILAL 61
P E Q + L F F +RK A VA+PGG GTLDE+FE L L
Sbjct: 62 PHEAHNNEYQTISLSFEYFYSRKATFF--------MHSMAYVAMPGGFGTLDELFEALTL 113
Query: 62 IQLERIGSELPVPFLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALS 120
IQ ++ P P +++ F+ L+D+L + G +A ++ +L+ I D ++ +
Sbjct: 114 IQTGKV---PPAPIVLVG-SEFWHGLVDWLDEQLLANGMIAAHDL-NLFIIEDDPAKVVR 168
Query: 121 YLAEFYD 127
+ EF+D
Sbjct: 169 KVVEFHD 175
>gi|423313107|ref|ZP_17291043.1| TIGR00730 family protein [Bacteroides vulgatus CL09T03C04]
gi|392686321|gb|EIY79627.1| TIGR00730 family protein [Bacteroides vulgatus CL09T03C04]
Length = 175
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
++L++ RK + D + V+ALPGG GTL+E+ EI+ QL G L
Sbjct: 82 TRLIETETMHERKRMMADLS--------DGVIALPGGCGTLEELLEIITWKQL---GLYL 130
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVAS 107
P +++N + FY LL+ L + + K+ VAS
Sbjct: 131 N-PIIILNINGFYNPLLEMLQRAVEGNFMRKEHVAS 165
>gi|385810867|ref|YP_005847263.1| Rossmann fold nucleotide-binding protein [Ignavibacterium album JCM
16511]
gi|383802915|gb|AFH49995.1| Putative Rossmann fold nucleotide-binding protein [Ignavibacterium
album JCM 16511]
Length = 285
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDF 90
A+V PGG GT+DE FEIL LIQ E+I +L LV+ + ++K +++F
Sbjct: 185 ALVVFPGGFGTMDEFFEILTLIQTEKIRKKLA---LVVYDEKYWKSVINF 231
>gi|381189386|ref|ZP_09896934.1| hypothetical protein HJ01_03454 [Flavobacterium frigoris PS1]
gi|379648595|gb|EIA07182.1| hypothetical protein HJ01_03454 [Flavobacterium frigoris PS1]
Length = 242
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC--EDWG 98
V +PGG GT+DE+FE + LIQ ++I + P+ ++ SF+ L++++ E
Sbjct: 151 GFVVMPGGFGTMDELFEAMTLIQTKKI-ARFPI---ILVGTSFWSGLIEWIKTVLIEKEH 206
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFY 126
TV D++ L KI D+ E + L FY
Sbjct: 207 TVGPDDL-KLIKIVDTEDEVVDVLDNFY 233
>gi|307718659|ref|YP_003874191.1| hypothetical protein STHERM_c09720 [Spirochaeta thermophila DSM
6192]
gi|306532384|gb|ADN01918.1| hypothetical protein STHERM_c09720 [Spirochaeta thermophila DSM
6192]
Length = 219
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL 91
V LPGG+GT+DE FE+ L+QLE+ P +++N+ FY LL +
Sbjct: 131 GFVVLPGGIGTMDEFFEVYTLLQLEQHAK----PVMLLNFQGFYDPLLSLI 177
>gi|385209227|ref|ZP_10036095.1| putative Rossmann fold nucleotide-binding protein [Burkholderia sp.
Ch1-1]
gi|385181565|gb|EIF30841.1| putative Rossmann fold nucleotide-binding protein [Burkholderia sp.
Ch1-1]
Length = 339
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 61/108 (56%), Gaps = 14/108 (12%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I LPV V+
Sbjct: 229 YFAIRKLHLLERA--------QAAVFFPGGFGTCDELFEVLTLLQTNKI-RRLPV---VL 276
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+SF+++ ++F + G +A + A+L++ C++ ++ S + ++
Sbjct: 277 VGESFWRRAINFDFLISE-GMIAPQD-AALFRFCETAADIWSSIVRWH 322
>gi|254255511|ref|ZP_04948827.1| hypothetical protein BDAG_04856 [Burkholderia dolosa AUO158]
gi|124901248|gb|EAY71998.1| hypothetical protein BDAG_04856 [Burkholderia dolosa AUO158]
Length = 356
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 57/99 (57%), Gaps = 14/99 (14%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I P+P +++
Sbjct: 243 YFAIRKLHLLERA--------KAAVFFPGGYGTFDELFEVLTLLQTRKIA---PLPVILV 291
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
++++++ +DF D G + + ++A L+ C+S ++
Sbjct: 292 G-EAYWRRAVDF-AFLADEGMIDRRDLA-LFTYCESAAD 327
>gi|384515364|ref|YP_005710456.1| hypothetical protein CULC809_00826 [Corynebacterium ulcerans 809]
gi|334696565|gb|AEG81362.1| hypothetical protein CULC809_00826 [Corynebacterium ulcerans 809]
Length = 263
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 14/107 (13%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R+F ARK + + A V LPGG+GTLDE+FE+L ++Q ++ + P+
Sbjct: 152 FRYFFARKTMFLKYS--------QAFVCLPGGLGTLDELFEVLCMVQTGKV-TNFPI--- 199
Query: 77 VMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALSYL 122
V+ + F+ ++++L D G +A+ +V L+ + DS EA++++
Sbjct: 200 VLLGEGFWGDMVEWLKDRLVAEGMIAEKDV-DLFLVTDSVEEAVAHI 245
>gi|292493376|ref|YP_003528815.1| hypothetical protein Nhal_3396 [Nitrosococcus halophilus Nc4]
gi|291581971|gb|ADE16428.1| conserved hypothetical protein [Nitrosococcus halophilus Nc4]
Length = 241
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 14/124 (11%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R F +RK + A +A V LPGG GTLDE+ EIL L+Q G +P
Sbjct: 124 VNFRHFFSRKVMFVKYA--------SAYVVLPGGFGTLDELAEILTLVQ---TGKSRRIP 172
Query: 75 FLVMNYDSFYKKLLD-FLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
L+++ SF+ L+D F + G + ++ L+K+ D E + + +Y+ +
Sbjct: 173 ILLVS-SSFWAGLIDWFKKHLVEEGMIDSHDL-DLFKVLDEPQEVVDAIFSYYESRGFEP 230
Query: 134 RVHE 137
E
Sbjct: 231 SAEE 234
>gi|171909515|ref|ZP_02924985.1| hypothetical protein VspiD_00045 [Verrucomicrobium spinosum DSM
4136]
Length = 376
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 9/127 (7%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+ +LV +F RK + A AV PGG GT+DEMFE + L+Q + S
Sbjct: 179 DEKLVTFNYFFTRKLSFVKEA--------DAVALFPGGFGTMDEMFESITLMQTGK-ASI 229
Query: 71 LPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSS 130
LPV + +++ F+ + + E SL I DS EA+ + FY +
Sbjct: 230 LPVVLVDEPGGTYWSTFFAFVREHLYGHGLISQEDMSLVHITDSVDEAVRVITTFYKVFH 289
Query: 131 IDKRVHE 137
+ V E
Sbjct: 290 SYRHVKE 296
>gi|407794697|ref|ZP_11141721.1| lysine decarboxylase [Idiomarina xiamenensis 10-D-4]
gi|407211070|gb|EKE80940.1| lysine decarboxylase [Idiomarina xiamenensis 10-D-4]
Length = 191
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 43 VALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAK 102
+ALPGG+GTL+E+FE+L QLE + P FL N +Y LL FL D G V
Sbjct: 104 IALPGGLGTLEEIFEMLTWQQLEF--HQKPCAFL--NVSGYYNHLLQFLQHTVDEGFVRD 159
Query: 103 DEVASLWKICDSNSEAL 119
+ + + N+EAL
Sbjct: 160 GHHQMI--LHNDNAEAL 174
>gi|339505827|ref|YP_004693247.1| hypothetical protein RLO149_c043920 [Roseobacter litoralis Och 149]
gi|338759820|gb|AEI96284.1| hypothetical protein RLO149_c043920 [Roseobacter litoralis Och 149]
Length = 278
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 40 TAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGT 99
+A+ PGG GTLDE+FE L LIQ R+ PVP L+ F+ ++++ D GT
Sbjct: 187 SAICVFPGGFGTLDELFEALTLIQTGRM---QPVPVLLFGR-KFWDSIINW-DALADAGT 241
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYDLSS 130
++ +++ L+ +S +EA+ + + D +
Sbjct: 242 ISAEDL-ELFSFVESATEAMEVIDRWQDTPT 271
>gi|70728615|ref|YP_258364.1| hypothetical protein PFL_1233 [Pseudomonas protegens Pf-5]
gi|68342914|gb|AAY90520.1| conserved hypothetical protein [Pseudomonas protegens Pf-5]
Length = 372
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Query: 14 LVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPV 73
L+ FF RK + A A+V PGG GTLDE E+L LIQ + +PV
Sbjct: 163 LLSFHFFFTRKLFFVKEA--------DALVLCPGGFGTLDEALEVLTLIQTGK-SPLVPV 213
Query: 74 PFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
L M F++ LDF+ + + L ++ S EA+ + +FY
Sbjct: 214 VLLDMPGGQFWQGALDFIHNQLEANRYILPSDMKLVRLVHSTEEAVQEIQQFY 266
>gi|384103768|ref|ZP_10004733.1| hypothetical protein W59_20403 [Rhodococcus imtechensis RKJ300]
gi|383838732|gb|EID78101.1| hypothetical protein W59_20403 [Rhodococcus imtechensis RKJ300]
Length = 265
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 14/107 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + A + LPGG GTLDE+FE L L+Q ++ + P+
Sbjct: 151 INFRYFFARKTMFVKYS--------QAFICLPGGFGTLDELFEALTLVQTRKV-TRFPI- 200
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALS 120
V+ ++ L+D+L G + G +++ +V +L + D EA+
Sbjct: 201 --VLFGTEYWSGLVDWLRGTLQRSGKISEGDV-NLLHVTDDVEEAVQ 244
>gi|386346737|ref|YP_006044986.1| hypothetical protein [Spirochaeta thermophila DSM 6578]
gi|339411704|gb|AEJ61269.1| Conserved hypothetical protein CHP00730 [Spirochaeta thermophila
DSM 6578]
Length = 190
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 43 VALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL 91
V LPGG+GT+DE FE+ L+QLE+ P +++N+ FY LL +
Sbjct: 104 VVLPGGIGTMDEFFEVYTLLQLEQHAK----PVMLLNFQGFYDPLLSLI 148
>gi|217968975|ref|YP_002354209.1| hypothetical protein Tmz1t_0540 [Thauera sp. MZ1T]
gi|217506302|gb|ACK53313.1| conserved hypothetical protein [Thauera sp. MZ1T]
Length = 299
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 12/72 (16%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK + AV A+V+ PGG+GTLDE+FE+L L Q +I P +++
Sbjct: 191 YFAIRKMHFLMRAV--------ALVSFPGGLGTLDELFEVLTLTQTRKIRRR---PIVLI 239
Query: 79 NYDSFYKKLLDF 90
D F+++L+DF
Sbjct: 240 GRD-FWQRLIDF 250
>gi|387790462|ref|YP_006255527.1| hypothetical protein Solca_1262 [Solitalea canadensis DSM 3403]
gi|379653295|gb|AFD06351.1| TIGR00730 family protein [Solitalea canadensis DSM 3403]
Length = 238
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
V +PGG GT+DE+FE L LIQ ++ + P+ V+ S++ L +++ G
Sbjct: 148 GFVVMPGGFGTMDELFEALTLIQTGKV-ARFPI---VLVGTSYWSGLFEWIEKQLIEGGY 203
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
E +L+++ D+ EA+ ++ FY+
Sbjct: 204 ISAEDMNLFRLVDTADEAVEHIIRFYN 230
>gi|294506763|ref|YP_003570821.1| hypothetical protein SRM_00948 [Salinibacter ruber M8]
gi|294343091|emb|CBH23869.1| conserved hypothetical protein [Salinibacter ruber M8]
Length = 249
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Query: 41 AVVALPGGVGTLDEMFEILALIQL---ERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDW 97
A ALPGG GTL+E E+L L QL +R P ++N D FY LL F + D
Sbjct: 162 AFAALPGGYGTLEEFMEVLTLRQLGYHDR-------PIAILNADGFYDTLLSFFDELRD- 213
Query: 98 GTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 135
G A+ V L ++ S++EA+ L +++ D R+
Sbjct: 214 GRFARAAVTDLVEVV-SSAEAV--LDRIERMTAADGRM 248
>gi|443310543|ref|ZP_21040191.1| putative Rossmann fold nucleotide-binding protein [Synechocystis
sp. PCC 7509]
gi|442779381|gb|ELR89626.1| putative Rossmann fold nucleotide-binding protein [Synechocystis
sp. PCC 7509]
Length = 354
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 35/140 (25%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+ +L+ ++F RK L+ + AV PGG GT DE FE + L Q + G
Sbjct: 151 DRKLIHFKYFFTRKLFLLR--------ESDAVALFPGGFGTQDEAFECMTLSQTGKFG-- 200
Query: 71 LPVPFLVMNYDSFYKKLLDFLGDC--EDW-----------GTVAKDEVASLWKICDSNSE 117
PVP + L+D G C DW G V+KD+ +SL+ I D+
Sbjct: 201 -PVPLV----------LIDRPGGCYWHDWSAYIDKNLRKTGLVSKDD-SSLYTITDNLEV 248
Query: 118 ALSYLAEFYDLSSIDKRVHE 137
A + + +FY + + V E
Sbjct: 249 ACNAITDFYQVYHSSRYVKE 268
>gi|395498619|ref|ZP_10430198.1| lysine decarboxylase family protein [Pseudomonas sp. PAMC 25886]
Length = 195
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A +ALPGG+GTL+E+FE+ QL G P ++ + FY+KL DFL G V
Sbjct: 102 AFIALPGGLGTLEELFEVWTWGQLGYHGK----PLGLLEVNGFYRKLTDFLDHIVGEGFV 157
Query: 101 AKDEVASLWKICDSNSEALSYL 122
A L ++ +S +E L L
Sbjct: 158 RAPHRAML-QMSESPAELLDAL 178
>gi|343522880|ref|ZP_08759846.1| TIGR00730 family protein [Actinomyces sp. oral taxon 175 str.
F0384]
gi|343402289|gb|EGV14795.1| TIGR00730 family protein [Actinomyces sp. oral taxon 175 str.
F0384]
Length = 286
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK + + V +PGG+GTLDE+FE L L+Q ++I S P+
Sbjct: 177 VNFRYFFARKTMFVKYS--------DGFVVMPGGMGTLDELFEALTLVQTQKI-SSFPI- 226
Query: 75 FLVMNYDSFYKKLLDFL 91
V+ ++ LLD+L
Sbjct: 227 --VLVDSGYWGGLLDWL 241
>gi|325964010|ref|YP_004241916.1| hypothetical protein Asphe3_26620 [Arthrobacter phenanthrenivorans
Sphe3]
gi|323470097|gb|ADX73782.1| conserved hypothetical protein, DprA/Smf-related, family 1
TIGR00725/conserved hypothetical protein,
DprA/Smf-related, family 2 TIGR00730 [Arthrobacter
phenanthrenivorans Sphe3]
Length = 260
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 14/106 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + A + LPGG+GTLDE+FE + L+Q ++ S P
Sbjct: 149 INFRYFFARKTMFVKYA--------QGFIVLPGGLGTLDELFEAMVLVQTRKVTS---FP 197
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEAL 119
+++ D F+ ++D++ G G V++ ++ L ++ D +EA+
Sbjct: 198 IVLLGVD-FWGPMIDWIRGTLVAEGMVSEKDL-DLIQLVDDPAEAV 241
>gi|269928660|ref|YP_003320981.1| hypothetical protein Sthe_2745 [Sphaerobacter thermophilus DSM
20745]
gi|269788017|gb|ACZ40159.1| conserved hypothetical protein [Sphaerobacter thermophilus DSM
20745]
Length = 280
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A A V PGG GTLDE+FE L LIQ E+I S PV
Sbjct: 157 INFRYFFVRKTMFVKYA--------EAFVIFPGGFGTLDELFEALTLIQTEKI-SYFPVI 207
Query: 75 FLVMNYDSFYKKLLDFL 91
+Y ++ L+D+L
Sbjct: 208 LFGRDY---WQGLIDWL 221
>gi|206889729|ref|YP_002247984.1| hypothetical protein THEYE_A0133 [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206741667|gb|ACI20724.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 222
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 16/113 (14%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK I ++ V PGG GTLDE+FE L L+Q +I +
Sbjct: 110 LNFRYFFVRKLMFIKYSI--------GFVIFPGGFGTLDELFEALTLVQTGKI-----IS 156
Query: 75 FLVMNYDS-FYKKLLD-FLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
F V+ Y S ++K LLD F ++ G ++ D+ ++I D+ YL +
Sbjct: 157 FPVVLYGSEYWKGLLDWFKNSPKNLGAISLDDF-KYFEIIDNPEAVCGYLRNY 208
>gi|373850676|ref|ZP_09593477.1| Conserved hypothetical protein CHP00730 [Opitutaceae bacterium
TAV5]
gi|391233116|ref|ZP_10269322.1| putative Rossmann fold nucleotide-binding protein [Opitutaceae
bacterium TAV1]
gi|372476841|gb|EHP36850.1| Conserved hypothetical protein CHP00730 [Opitutaceae bacterium
TAV5]
gi|391222777|gb|EIQ01198.1| putative Rossmann fold nucleotide-binding protein [Opitutaceae
bacterium TAV1]
Length = 191
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 40 TAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL 91
+A +ALPGG+GTL+E+ EI+ L RI P +++N D FY LL F
Sbjct: 100 SAFIALPGGIGTLEELIEIMVARALNRIDK----PLVLVNQDGFYDDLLRFF 147
>gi|359149207|ref|ZP_09182271.1| hypothetical protein StrS4_22462 [Streptomyces sp. S4]
Length = 255
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 20/114 (17%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A V LPGG+GTLDE+FE L L+Q ++ + P+
Sbjct: 140 VNFRYFFVRKTMFVKYA--------QGFVVLPGGLGTLDELFEALTLVQTRKV-TRFPI- 189
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVAS----LWKICDSNSEALSYLAE 124
V+ ++ L+D+L D VA+ + A+ L+ + D EA++ + +
Sbjct: 190 --VLFGREYWSGLVDWLRDT----VVAQGKCAAKDLLLFHVTDDVEEAVALVTK 237
>gi|374587893|ref|ZP_09660983.1| Conserved hypothetical protein CHP00730 [Leptonema illini DSM
21528]
gi|373872581|gb|EHQ04577.1| Conserved hypothetical protein CHP00730 [Leptonema illini DSM
21528]
Length = 269
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 13/107 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
D +F RK+ + A +++ PGG GTLDE+FE L L+Q + + +++PV
Sbjct: 168 DFHYFFTRKYWFLYYA--------RLLISFPGGFGTLDELFETLTLMQTKNLKNDVPV-- 217
Query: 76 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
++ F+ +++DF E G +A ++ L+ I D EA+ ++
Sbjct: 218 -LLYGREFWNRVVDFEYLVES-GLIAAGDL-KLFTIVDGVDEAMEHI 261
>gi|111022928|ref|YP_705900.1| hypothetical protein RHA1_ro05965 [Rhodococcus jostii RHA1]
gi|110822458|gb|ABG97742.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 246
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 14/107 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + A + LPGG GTLDE+FE L L+Q ++ + P+
Sbjct: 132 INFRYFFARKTMFVKYS--------QAFICLPGGFGTLDELFEALTLVQTRKV-TRFPI- 181
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALS 120
V+ ++ L+D+L G + G +++ +V +L + D EA+
Sbjct: 182 --VLFGTEYWSGLVDWLRGTLQRSGKISEGDV-NLLHVTDDVEEAVQ 225
>gi|254485888|ref|ZP_05099093.1| conserved hypothetical protein TIGR00730 [Roseobacter sp. GAI101]
gi|214042757|gb|EEB83395.1| conserved hypothetical protein TIGR00730 [Roseobacter sp. GAI101]
Length = 280
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GTLDE FE L LIQ R+ VPFL+ +F++K++++ D GT+
Sbjct: 190 AVCVFPGGFGTLDETFEALTLIQTGRMSR---VPFLLFGR-AFWEKIINW-DALADAGTI 244
Query: 101 AKDEVASLWKICDSNSEAL 119
+ +++ L++ ++ +EA+
Sbjct: 245 SAEDL-DLFQFVETAAEAV 262
>gi|217976336|ref|YP_002360483.1| hypothetical protein Msil_0139 [Methylocella silvestris BL2]
gi|217501712|gb|ACK49121.1| conserved hypothetical protein [Methylocella silvestris BL2]
Length = 217
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL 91
A VALPGGVGTL+E+ E L +QLER P ++ + D F++ LLD
Sbjct: 120 AFVALPGGVGTLEELVEQLTWVQLERHTK----PVVIADIDGFWQPLLDLF 166
>gi|432335921|ref|ZP_19587471.1| hypothetical protein Rwratislav_13633 [Rhodococcus wratislaviensis
IFP 2016]
gi|430777153|gb|ELB92526.1| hypothetical protein Rwratislav_13633 [Rhodococcus wratislaviensis
IFP 2016]
Length = 265
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 14/107 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + A + LPGG GTLDE+FE L L+Q ++ + P+
Sbjct: 151 INFRYFFARKTMFVKYS--------QAFICLPGGFGTLDELFEALTLVQTRKV-TRFPI- 200
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALS 120
V+ ++ L+D+L G + G +++ +V +L + D EA+
Sbjct: 201 --VLFGTEYWSGLVDWLRGTLQRSGKISEGDV-NLLHVTDDVEEAVQ 244
>gi|395778962|ref|ZP_10459473.1| TIGR00730 family protein [Bartonella elizabethae Re6043vi]
gi|423714810|ref|ZP_17689034.1| TIGR00730 family protein [Bartonella elizabethae F9251]
gi|395417137|gb|EJF83489.1| TIGR00730 family protein [Bartonella elizabethae Re6043vi]
gi|395431029|gb|EJF97057.1| TIGR00730 family protein [Bartonella elizabethae F9251]
Length = 287
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE+FE L LIQ R+ VP L+ + F+ ++F GT+
Sbjct: 205 ALAIFPGGFGTLDELFETLTLIQTGRMKQ---VPILLFGKE-FWSNAVNF-EYLASQGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ +V +L K ++ +EA + FY L
Sbjct: 260 SPTDV-NLVKFVNTAAEAFKEIRSFYKL 286
>gi|416200375|ref|ZP_11619641.1| hypothetical protein TIGR00730 [Neisseria meningitidis 961-5945]
gi|325143123|gb|EGC65470.1| hypothetical protein TIGR00730 [Neisseria meningitidis 961-5945]
Length = 210
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL-GDCEDWGT 99
A V +PGG GTLDE+FEIL L+Q ++ P P +++ +F+ L +++ G
Sbjct: 125 AYVVMPGGFGTLDELFEILTLVQTGKV---PPRPIVLVG-KAFWSGLAEWINAQLLACGL 180
Query: 100 VAKDEVASLWKICDSNSEALSYLAE 124
+++ V SL+ I D E ++YL+E
Sbjct: 181 ISEGAV-SLFAISDDEDEIVAYLSE 204
>gi|395764936|ref|ZP_10445556.1| TIGR00730 family protein [Bartonella sp. DB5-6]
gi|395413753|gb|EJF80215.1| TIGR00730 family protein [Bartonella sp. DB5-6]
Length = 287
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE+FE L L+Q R+ VP L+ + F+ +++F GT+
Sbjct: 205 ALAIFPGGFGTLDELFETLTLMQTGRMKQ---VPILMFGKE-FWNNVINF-DYLSAQGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ D++ +L ++ +EA + FY L
Sbjct: 260 SPDDL-TLMTFVNTAAEAFEEIRSFYKL 286
>gi|381164494|ref|ZP_09873724.1| TIGR00730 family protein [Saccharomonospora azurea NA-128]
gi|418463130|ref|ZP_13034154.1| hypothetical protein SZMC14600_19284 [Saccharomonospora azurea SZMC
14600]
gi|359734378|gb|EHK83355.1| hypothetical protein SZMC14600_19284 [Saccharomonospora azurea SZMC
14600]
gi|379256399|gb|EHY90325.1| TIGR00730 family protein [Saccharomonospora azurea NA-128]
Length = 260
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK + + A + LPGG GTLDE+FE L L+Q +++ ++ PV
Sbjct: 154 VNFRYFFARKTMFVKYS--------QAFICLPGGFGTLDELFEALTLVQTKKV-TKFPV- 203
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
V+ S++ L D++ D
Sbjct: 204 --VLFGTSYWGGLYDWVRDT 221
>gi|421891436|ref|ZP_16322238.1| conserved hypothetical protein [Ralstonia solanacearum K60-1]
gi|378963233|emb|CCF98986.1| conserved hypothetical protein [Ralstonia solanacearum K60-1]
Length = 194
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 37 CDRT-AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCE 95
DR A +A+PGG+GT +E+FE +QL G P ++N FY KLL F+
Sbjct: 95 ADRADAFIAMPGGIGTYEELFETFTWLQLGYHGK----PIGLLNVAGFYDKLLAFIDHAV 150
Query: 96 DWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
D G + + A L + D + AL L E ++DK
Sbjct: 151 DEGFLMRHH-ADLLHVSD-DPGALIDLLERAPREAVDK 186
>gi|421740625|ref|ZP_16178871.1| TIGR00730 family protein [Streptomyces sp. SM8]
gi|406690971|gb|EKC94746.1| TIGR00730 family protein [Streptomyces sp. SM8]
Length = 263
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 20/114 (17%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A V LPGG+GTLDE+FE L L+Q ++ + P+
Sbjct: 148 VNFRYFFVRKTMFVKYA--------QGFVVLPGGLGTLDELFEALTLVQTRKV-TRFPI- 197
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVAS----LWKICDSNSEALSYLAE 124
V+ ++ L+D+L D VA+ + A+ L+ + D EA++ + +
Sbjct: 198 --VLFGREYWSGLVDWLRDT----VVAQGKCAAKDLLLFHVTDDVEEAVALVTK 245
>gi|441513162|ref|ZP_20994994.1| hypothetical protein GOAMI_15_01450 [Gordonia amicalis NBRC 100051]
gi|441452143|dbj|GAC52955.1| hypothetical protein GOAMI_15_01450 [Gordonia amicalis NBRC 100051]
Length = 274
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A A V LPGG+GTLDE+FE L L+Q +++ + P
Sbjct: 158 MNFRYFFVRKTMFVKYA--------QAFVCLPGGMGTLDELFEALTLVQTKKV---VRFP 206
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
+++ D F+ LLD++ D
Sbjct: 207 IVLVGRD-FWGGLLDWMRDV 225
>gi|429205458|ref|ZP_19196735.1| hypothetical protein D271_07165 [Lactobacillus saerimneri 30a]
gi|428146530|gb|EKW98769.1| hypothetical protein D271_07165 [Lactobacillus saerimneri 30a]
Length = 188
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 20 FSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMN 79
S RK +++ A A V LPGG+GT++E F++ + QL I + P +V N
Sbjct: 87 MSVRKKRMLELA--------DAFVILPGGLGTMEEFFQVYSWNQLG-INRK---PIVVAN 134
Query: 80 YDSFYKKLLDFLGDCEDWGTVAKDEVASL 108
D +Y +LL FL D D G + ++ + SL
Sbjct: 135 IDGYYDQLLAFLQDVVDHGFMPQENLDSL 163
>gi|225874006|ref|YP_002755465.1| hypothetical protein ACP_2427 [Acidobacterium capsulatum ATCC
51196]
gi|225793332|gb|ACO33422.1| conserved hypothetical protein [Acidobacterium capsulatum ATCC
51196]
Length = 307
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDEMFEIL L Q ++ ++ + V+ S++K++++ +
Sbjct: 201 ALVVFPGGFGTLDEMFEILTLSQTNKLAKKIGI---VVYGSSYWKQVINLDALVQKGAIS 257
Query: 101 AKDEVASLWKICDSNSEALSYL 122
A D L++ D+ EA + L
Sbjct: 258 AADR--ELFQFADTPEEAFALL 277
>gi|33865665|ref|NP_897224.1| hypothetical protein SYNW1131 [Synechococcus sp. WH 8102]
gi|33632835|emb|CAE07646.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length = 189
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A VALPGG+GTL+E+FE L +QL G P ++N +Y LL FL G V
Sbjct: 109 ATVALPGGLGTLEELFEALTWLQLRFHGK----PCALLNVSGYYDHLLQFLDGAVADGFV 164
Query: 101 AKDE 104
A++
Sbjct: 165 AEEH 168
>gi|312138864|ref|YP_004006200.1| lysine decarboxylase [Rhodococcus equi 103S]
gi|311888203|emb|CBH47515.1| putative lysine decarboxylase [Rhodococcus equi 103S]
Length = 268
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 14/111 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + A + LPGG GTLDE+FE L L+Q +I + P+
Sbjct: 154 INFRYFFARKTMFVKYS--------QAFICLPGGFGTLDELFEALTLVQTRKI-TRFPI- 203
Query: 75 FLVMNYDSFYKKLLDFLGDC-EDWGTVAKDEVASLWKICDSNSEALSYLAE 124
V+ F+ L+D+L E G ++ ++ L + DS E + + E
Sbjct: 204 --VLVGTEFWSGLMDWLRSALERSGKISPGDI-DLIHVTDSIDEVVRIVVE 251
>gi|398782786|ref|ZP_10546460.1| hypothetical protein SU9_08619 [Streptomyces auratus AGR0001]
gi|396996449|gb|EJJ07440.1| hypothetical protein SU9_08619 [Streptomyces auratus AGR0001]
Length = 249
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
VD R+F RK + A V LPGG+GTLDE+FE L L+Q ++ + P+
Sbjct: 148 VDFRYFFVRKTCFVKYA--------RGFVVLPGGLGTLDELFEALTLVQTRKV-TRFPI- 197
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
V+ +++ L+D+L D
Sbjct: 198 --VLFGTAYWSGLVDWLRDT 215
>gi|375093659|ref|ZP_09739924.1| TIGR00730 family protein [Saccharomonospora marina XMU15]
gi|374654392|gb|EHR49225.1| TIGR00730 family protein [Saccharomonospora marina XMU15]
Length = 260
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A A + LPGG GTLDE+FE L L+Q +++ ++ PV
Sbjct: 154 VNFRYFFTRKTMFVKYA--------QAFICLPGGFGTLDELFEALTLVQTKKV-TKFPV- 203
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
V+ +++ L D++ G G + D A+L + D +A+ + E Y
Sbjct: 204 --VLFGSAYWGGLYDWVRGTVLSEGKIG-DRDAALLHVTDDIDDAVGVVLEAY 253
>gi|148265730|ref|YP_001232436.1| hypothetical protein Gura_3710 [Geobacter uraniireducens Rf4]
gi|146399230|gb|ABQ27863.1| conserved hypothetical protein 730 [Geobacter uraniireducens Rf4]
Length = 351
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Query: 3 SPKVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALI 62
+P + +L+ ++F RK + A A+ PGG GTLDE E+ LI
Sbjct: 143 APNRVMLANPRLITYKYFFNRKVAFVKEA--------DALAVFPGGFGTLDEAMEVFTLI 194
Query: 63 QLERIGSELPVPF-LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSY 121
Q G P P L+ + D ++++ F+ + E S++ I S EA+
Sbjct: 195 Q---TGKTSPKPLVLIDDSDGYWEQWFKFIKERMLGKGFISAEDFSIFTITRSEEEAVKV 251
Query: 122 LAEFY 126
+ +FY
Sbjct: 252 IEDFY 256
>gi|325676432|ref|ZP_08156110.1| methionyl-tRNA formyltransferase [Rhodococcus equi ATCC 33707]
gi|325552610|gb|EGD22294.1| methionyl-tRNA formyltransferase [Rhodococcus equi ATCC 33707]
Length = 245
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + A + LPGG GTLDE+FE L L+Q +I + P+
Sbjct: 131 INFRYFFARKTMFVKYS--------QAFICLPGGFGTLDELFEALTLVQTRKI-TRFPI- 180
Query: 75 FLVMNYDSFYKKLLDFL 91
V+ F+ L+D+L
Sbjct: 181 --VLVGTEFWSGLMDWL 195
>gi|409436650|ref|ZP_11263820.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
gi|408751574|emb|CCM74974.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
Length = 183
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGS 69
Q ++L+ RKH + + R+D A VALPGG+GTL+E+ EI+ QL R
Sbjct: 62 QLNELIVTPDMHTRKHAMFE---RSD-----AFVALPGGIGTLEEIVEIMTWAQLGR--H 111
Query: 70 ELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
E P+ F N + F+ +++ + D G V I D + +A+ + +
Sbjct: 112 EKPMVFA--NVNGFWDPMMELMRHMTDEGFVHTAHRVQPLVIDDISEIIPGIMAQAAENA 169
Query: 130 SIDK 133
SID+
Sbjct: 170 SIDR 173
>gi|83815481|ref|YP_444906.1| lysine decarboxylase-like protein [Salinibacter ruber DSM 13855]
gi|83756875|gb|ABC44988.1| lysine decarboxylase-like protein [Salinibacter ruber DSM 13855]
Length = 324
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Query: 41 AVVALPGGVGTLDEMFEILALIQL---ERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDW 97
A ALPGG GTL+E E+L L QL +R P ++N D FY LL F + D
Sbjct: 237 AFAALPGGYGTLEEFMEVLTLRQLGYHDR-------PIAILNADGFYDTLLSFFDELRD- 288
Query: 98 GTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 135
G A+ V L ++ S++EA+ L +++ D R+
Sbjct: 289 GRFARAAVTDLVEVV-SSAEAV--LDRIERMTAADGRM 323
>gi|402698776|ref|ZP_10846755.1| putative decarboxylase [Pseudomonas fragi A22]
Length = 370
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
+ L+ FF RK I A A+V PGG GTLDE+ E+L L+Q + +
Sbjct: 160 ANLLAFHFFFTRKLFFIKEA--------DALVMCPGGFGTLDEVLEVLTLMQTGKT-PLV 210
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
PV L M +F++ LDF+ + + L ++ + EA++ + +FY
Sbjct: 211 PVVLLDMPGGTFWQSALDFIRNQLEAHQYILPNDLKLMRLVHTAEEAVAEINQFY 265
>gi|390449094|ref|ZP_10234706.1| hypothetical protein A33O_05855 [Nitratireductor aquibiodomus RA22]
gi|389664884|gb|EIM76368.1| hypothetical protein A33O_05855 [Nitratireductor aquibiodomus RA22]
Length = 215
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 21/106 (19%)
Query: 4 PKVLCKQESQLVDL---------RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDE 54
PK L ++E+ VDL RKH + + R+D A VALPGG+GTL+E
Sbjct: 80 PKFLIRREANEVDLAELDELIVTEDMHQRKHTMFE---RSD-----AFVALPGGIGTLEE 131
Query: 55 MFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
+ EI+ QL R E P F N F+ LL + + G V
Sbjct: 132 IVEIMTWAQLAR--HEKPTVF--ANIGGFWNPLLTLVDHMKQEGFV 173
>gi|350570007|ref|ZP_08938384.1| methionyl-tRNA formyltransferase [Neisseria wadsworthii 9715]
gi|349797582|gb|EGZ51340.1| methionyl-tRNA formyltransferase [Neisseria wadsworthii 9715]
Length = 244
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V + F RK + AV A V +PGG GTLDE+FE L L+Q + P
Sbjct: 125 VTFQHFFPRKVMFVKHAV--------AYVTMPGGFGTLDELFESLTLVQTGKT----PAR 172
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+++ ++F++ L+D++ + E L ++ D E ++Y+ E Y+
Sbjct: 173 PIILVGETFWRGLIDWVKAQLLANGMISPEDMDLIRLMDDEDEIVAYIFEHYE 225
>gi|320108502|ref|YP_004184092.1| hypothetical protein AciPR4_3344 [Terriglobus saanensis SP1PR4]
gi|319927023|gb|ADV84098.1| Conserved hypothetical protein CHP00730 [Terriglobus saanensis
SP1PR4]
Length = 309
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDEMFE+L L Q ++ ++ ++ Y S Y K + L D G +
Sbjct: 192 ALVVFPGGFGTLDEMFELLTLAQTHKLAKKM----TIVIYGSEYWKSVINLDALADKGAI 247
Query: 101 A-KDEVASLWKICDSNSEALSYLAE 124
A KD+ L++ D+ +A L E
Sbjct: 248 AVKDK--ELFRFADTPEDAFRMLRE 270
>gi|297192263|ref|ZP_06909661.1| lysine decarboxylase [Streptomyces pristinaespiralis ATCC 25486]
gi|197719756|gb|EDY63664.1| lysine decarboxylase [Streptomyces pristinaespiralis ATCC 25486]
Length = 249
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 12/110 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A V LPGG+GTLDE+FE L L+Q ++ + P+
Sbjct: 148 VNFRYFFVRKTMFVKYA--------QGFVVLPGGLGTLDELFEALTLVQTRKV-TRFPIV 198
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
+Y + L+D+L D A ++ L+ + D EA++ +++
Sbjct: 199 LFGTDY---WSGLVDWLRDTVIAQGKASEKDLLLFHVTDDVEEAVAMVSK 245
>gi|224537280|ref|ZP_03677819.1| hypothetical protein BACCELL_02157 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521101|gb|EEF90206.1| hypothetical protein BACCELL_02157 [Bacteroides cellulosilyticus
DSM 14838]
Length = 195
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 13/111 (11%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
++++++ RK + D + AV+ALPGG GTL+E+ EI+ QL G L
Sbjct: 82 TEMIEVENMHQRKQKMADLS--------DAVIALPGGCGTLEELLEIITWKQL---GLYL 130
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
P +++N + F+ LL L D + + ++W + + EA+ +
Sbjct: 131 N-PIVILNTNGFFDPLLAMLQRAMD-ENFMRQQHGAIWHVASTPQEAVELI 179
>gi|429754043|ref|ZP_19286793.1| TIGR00730 family protein [Capnocytophaga sp. oral taxon 326 str.
F0382]
gi|429170476|gb|EKY12149.1| TIGR00730 family protein [Capnocytophaga sp. oral taxon 326 str.
F0382]
Length = 228
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 60/114 (52%), Gaps = 15/114 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ +F ARK + + A +A+PGG GTLDE+FE L L+Q +I +P
Sbjct: 118 IKFNYFFARKVMFVKYS--------KAFIAMPGGFGTLDELFETLTLVQTHKIDK---IP 166
Query: 75 FLVMNYDSFYKKLLDFLGDC--EDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+++ D ++ L++++ E + ++ +++ L+ + D+ + + + +FY
Sbjct: 167 IILVGTD-YWSGLVEWIKTILLEKFNNISPEDL-DLFHLVDTEDQVIKVIEDFY 218
>gi|395804269|ref|ZP_10483510.1| hypothetical protein FF52_20405 [Flavobacterium sp. F52]
gi|395433913|gb|EJF99865.1| hypothetical protein FF52_20405 [Flavobacterium sp. F52]
Length = 217
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 34 NDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGD 93
ND CD V+ALPGG GTL+E+FE+L QL P ++N + FY L+ L
Sbjct: 119 NDLCD--GVIALPGGFGTLEELFEMLTWAQL----GLHKKPIAILNVNGFYDALITLLQT 172
Query: 94 CEDWG 98
+ G
Sbjct: 173 MTEKG 177
>gi|386359851|ref|YP_006058096.1| hypothetical protein TtJL18_0401 [Thermus thermophilus JL-18]
gi|383508878|gb|AFH38310.1| TIGR00730 family protein [Thermus thermophilus JL-18]
Length = 217
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 13/112 (11%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
++ + LR+F RK + AV V LPGG GTLDE+ E+L LIQ E++
Sbjct: 112 QTHALSLRYFFVRKVLFVRYAV--------GFVFLPGGFGTLDELSEVLVLIQTEKV-HR 162
Query: 71 LPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
PV L Y ++ L+ +L D V +++ L+++ D E + L
Sbjct: 163 FPVFLLERGY---WEGLVRWLAFLRDQKAVGPEDLG-LFRLLDEPEEVVQAL 210
>gi|312194602|ref|YP_004014663.1| hypothetical protein FraEuI1c_0715 [Frankia sp. EuI1c]
gi|311225938|gb|ADP78793.1| Conserved hypothetical protein CHP00730 [Frankia sp. EuI1c]
Length = 331
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V R+F RK + A A V LPGG+GTLDE+FE L L+Q ++ PV
Sbjct: 221 VSFRYFFVRKTMFVKYA--------EAFVILPGGLGTLDELFEALTLVQTGKV-RRFPVV 271
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEAL 119
L +Y ++ LLD+L KD L+ + D EA+
Sbjct: 272 LLGTDY---WRGLLDWLRGTVVGTARMKDTDLDLFSLTDDVDEAV 313
>gi|386383469|ref|ZP_10068953.1| hypothetical protein STSU_11240 [Streptomyces tsukubaensis
NRRL18488]
gi|385669075|gb|EIF92334.1| hypothetical protein STSU_11240 [Streptomyces tsukubaensis
NRRL18488]
Length = 249
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 20/114 (17%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A + V LPGG+GTLDE+FE L L+Q ++ + P+
Sbjct: 148 VNFRYFFVRKTMFVKYA--------SGFVVLPGGLGTLDELFEALTLVQTGKV-TRFPI- 197
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVAS----LWKICDSNSEALSYLAE 124
V+ +++ L+D+L D VA+ + + L+ + D EA++ + +
Sbjct: 198 --VLFGSAYWSGLVDWLRDT----VVAQGKASERDLLLFHVTDDVDEAVALVTK 245
>gi|217969436|ref|YP_002354670.1| hypothetical protein Tmz1t_1009 [Thauera sp. MZ1T]
gi|217506763|gb|ACK53774.1| conserved hypothetical protein [Thauera sp. MZ1T]
Length = 147
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
+VA PGG GTLDE+FE+L LIQ ++ +PV V+ +F+++++DF D G +
Sbjct: 58 GLVAFPGGYGTLDELFEVLTLIQSGKM-QRIPV---VLVGRAFWRRVVDF-DLLLDEGYI 112
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+ ++ L+ D E +S L FY
Sbjct: 113 SPSDL-DLFTCVDEAEEIVSALERFY 137
>gi|300703618|ref|YP_003745220.1| hypothetical protein RCFBP_11302 [Ralstonia solanacearum CFBP2957]
gi|299071281|emb|CBJ42599.1| conserved protein of unknown function [Ralstonia solanacearum
CFBP2957]
Length = 194
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 37 CDRT-AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCE 95
DR A +A+PGG+GT +E+FE +QL G P ++N FY KLL F+
Sbjct: 95 ADRADAFIAMPGGIGTYEELFETFTWLQLGYHGK----PIGLLNVAGFYDKLLAFIDHAV 150
Query: 96 DWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
D G + + A L + D + AL L E ++DK
Sbjct: 151 DEGFLMRHH-ADLLHVSD-DPGALIDLLERAPREAVDK 186
>gi|319950854|ref|ZP_08024738.1| hypothetical protein ES5_14643 [Dietzia cinnamea P4]
gi|319435509|gb|EFV90745.1| hypothetical protein ES5_14643 [Dietzia cinnamea P4]
Length = 266
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL-GDCEDWGT 99
A V PGG GTLDE FE + L+Q ++I + P+ L ++ F+ L+D++ G + G
Sbjct: 162 AFVCTPGGFGTLDEFFEAITLVQTDKI-TRFPIVLLGVD---FWSPLVDWIRGTLAEQGM 217
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVHEVNLKSTH 144
++ ++ L+ + DS EA+ ++ E + +++ E + H
Sbjct: 218 ISASDL-ELFLVTDSVPEAVEFIREAHHRAALTSEQREDLIGEEH 261
>gi|218296250|ref|ZP_03497006.1| conserved hypothetical protein [Thermus aquaticus Y51MC23]
gi|218243322|gb|EED09852.1| conserved hypothetical protein [Thermus aquaticus Y51MC23]
Length = 92
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 32 VRNDSCDRTAV--VALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYD-SFYKKLL 88
+R R AV V LPGG GTLDE+ E+L LIQ E++ PF V D +++ LL
Sbjct: 1 MRKVLFARYAVGFVFLPGGFGTLDELSEVLVLIQTEKVH-----PFPVFPLDRGYWEGLL 55
Query: 89 DFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
++ ED G + ++A L + D+ E ++ L
Sbjct: 56 SWMAFLEDQGAIGPQDLALLTPL-DTPEEVVAAL 88
>gi|156097973|ref|XP_001615019.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803893|gb|EDL45292.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 368
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 19/120 (15%)
Query: 9 KQESQLVD------LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALI 62
K +Q VD +F RK L+ ++ A + LPGG GTLDE+ EIL L
Sbjct: 248 KGANQYVDQNLSFKFHYFFTRKFWLVYLSL--------AFIILPGGFGTLDELMEILTLK 299
Query: 63 QLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
Q ++ +P+ ++ F+ +L+F D+G ++++++ S++ + D EA +Y+
Sbjct: 300 QCKKFKRNVPI---ILFGKDFWSSILNF-KKLADYGLISQEDLDSIF-LTDCIEEAYNYV 354
>gi|427704483|ref|YP_007047705.1| Rossmann fold nucleotide-binding protein [Cyanobium gracile PCC
6307]
gi|427347651|gb|AFY30364.1| putative Rossmann fold nucleotide-binding protein [Cyanobium
gracile PCC 6307]
Length = 361
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+ +L+ R+F RK + + A+V +PGG GTLDE+FE L LIQ R S
Sbjct: 154 DGRLLYFRYFFTRKLFFL--------MESDALVVMPGGFGTLDELFECLTLIQTGRT-SP 204
Query: 71 LPVPFLVMNYDSFYKKL-LDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+P+ L + D F+K + + G ++ ++V + + D+ EA++++ FY
Sbjct: 205 IPLVLLSPDGDDFWKVWKRNVHQELATRGLISPEDVDLMVEASDAE-EAVAHICRFY 260
>gi|336321639|ref|YP_004601607.1| Conserved hypothetical protein CHP00730 [[Cellvibrio] gilvus ATCC
13127]
gi|336105220|gb|AEI13039.1| Conserved hypothetical protein CHP00730 [[Cellvibrio] gilvus ATCC
13127]
Length = 277
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK + + V LPGG GTLDE+FE L L+Q ++ + P+
Sbjct: 148 VNFRYFFARKTMFVKYS--------EGFVVLPGGFGTLDELFEALTLVQTHKV-IQFPI- 197
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
V+ ++++ LLD++G
Sbjct: 198 --VLVGRAYWQGLLDWIGGS 215
>gi|294010173|ref|YP_003543633.1| putative nucleotide-binding protein [Sphingobium japonicum UT26S]
gi|390167566|ref|ZP_10219550.1| putative nucleotide-binding protein [Sphingobium indicum B90A]
gi|292673503|dbj|BAI95021.1| putative nucleotide-binding protein [Sphingobium japonicum UT26S]
gi|389589835|gb|EIM67846.1| putative nucleotide-binding protein [Sphingobium indicum B90A]
Length = 292
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GT DEMFE+L LIQ G P+P L+ + F+ +++DF D G +
Sbjct: 204 ALAVFPGGFGTFDEMFELLTLIQ---TGKMKPIPVLLFGRE-FWTRVVDFEA-LADEGVI 258
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
+ ++ +L ++ +A + FY+
Sbjct: 259 SPSDL-NLLTWVETAEDAWEAVQRFYE 284
>gi|163867373|ref|YP_001608567.1| hypothetical protein Btr_0076 [Bartonella tribocorum CIP 105476]
gi|161017014|emb|CAK00572.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 289
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 16/114 (14%)
Query: 16 DLRFFSARK-HGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ +F RK H L+ A+ PGG GTLDE+FE L LIQ R+ VP
Sbjct: 190 NFHYFGMRKMHFLVRA---------KALAIFPGGFGTLDELFETLTLIQTGRMKQ---VP 237
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
L+ + F+ ++F GT++ ++ +L K ++ +EA + FY L
Sbjct: 238 ILLFGKE-FWSNTINF-EYLASQGTISPADI-NLVKFVNTAAEAFEEIRSFYKL 288
>gi|119478464|ref|ZP_01618449.1| lysine decarboxylase family protein [marine gamma proteobacterium
HTCC2143]
gi|119448550|gb|EAW29797.1| lysine decarboxylase family protein [marine gamma proteobacterium
HTCC2143]
Length = 226
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 14/105 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D R+F RK + AV V PGG GT+DE+FE L L+Q ++ P P
Sbjct: 117 LDFRYFFVRKFLFVKHAV--------GFVIFPGGYGTMDELFEALTLVQTGKVD---PFP 165
Query: 75 FLVMNYDSFYKKLLDFLGDCE-DWGTVAKDEVASLWKICDSNSEA 118
+++ S++ L+D+L G + +D++ L+ + D+ EA
Sbjct: 166 IVLIGV-SYWSGLIDWLQQTMLSEGCITQDDM-ELFHLVDTPEEA 208
>gi|126663816|ref|ZP_01734811.1| hypothetical protein FBBAL38_10052 [Flavobacteria bacterium BAL38]
gi|126624080|gb|EAZ94773.1| hypothetical protein FBBAL38_10052 [Flavobacteria bacterium BAL38]
Length = 241
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCE-DWGT 99
V +PGG GTLDE+FE + LIQ ++IG + P+ ++ F+ LLD++ D
Sbjct: 150 GFVVMPGGFGTLDELFEAVTLIQTKKIG-KFPI---ILVGSEFWSGLLDWIKTVMIDKMK 205
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFY 126
A + +L +I D+ E L L FY
Sbjct: 206 NANPDDLNLIQIVDTEDEVLDALDNFY 232
>gi|441507696|ref|ZP_20989622.1| hypothetical protein GOACH_03_06060 [Gordonia aichiensis NBRC
108223]
gi|441448772|dbj|GAC47583.1| hypothetical protein GOACH_03_06060 [Gordonia aichiensis NBRC
108223]
Length = 272
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 12/110 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A A V LPGG GTLDE+FE L L+Q +++ P+
Sbjct: 170 MNFRYFFVRKTMFVKYA--------QAFVCLPGGFGTLDELFEALTLVQTKKV-VRFPIV 220
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
L + + L+D++ D G + + L+ + D+ EA++ +A+
Sbjct: 221 LLGREH---WAGLVDWMRDRLLAGGMISSDDLDLFHVVDTPEEAVAIIAD 267
>gi|271969619|ref|YP_003343815.1| Rossmann fold nucleotide-binding protein-like protein
[Streptosporangium roseum DSM 43021]
gi|270512794|gb|ACZ91072.1| Rossmann fold nucleotide-binding protein-like protein
[Streptosporangium roseum DSM 43021]
Length = 267
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + SC VALPGG GT+DE+FE L L+Q ++ S P
Sbjct: 146 IEFRYFFVRKTMFVKY-----SC---GFVALPGGFGTMDELFEALTLVQTRKVTS---FP 194
Query: 75 FLVMNYDSFYKKLLDFL 91
++M + F+ LLD++
Sbjct: 195 VVLMGTE-FWGGLLDWI 210
>gi|167840588|ref|ZP_02467272.1| decarboxylase family protein [Burkholderia thailandensis MSMB43]
gi|424905736|ref|ZP_18329239.1| decarboxylase family protein [Burkholderia thailandensis MSMB43]
gi|390928629|gb|EIP86033.1| decarboxylase family protein [Burkholderia thailandensis MSMB43]
Length = 318
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 14/99 (14%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I S LPV V+
Sbjct: 222 YFAIRKLHLLERA--------KAAVFFPGGYGTCDELFEVLTLLQTRKIAS-LPV---VL 269
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
+F++ +DF G D G + +V L++ C++ E
Sbjct: 270 VGCAFWRSAVDF-GFLVDEGMIDPRDV-ELFRFCETADE 306
>gi|68536475|ref|YP_251180.1| hypothetical protein jk1389 [Corynebacterium jeikeium K411]
gi|68264074|emb|CAI37562.1| hypothetical protein jk1389 [Corynebacterium jeikeium K411]
Length = 285
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 18/121 (14%)
Query: 12 SQLVDL----RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERI 67
+Q VDL R+F RK + + A + LPGG GTLDE+FE L ++Q E+I
Sbjct: 142 NQWVDLGLNFRYFFVRKTMFLKYS--------QAFICLPGGYGTLDELFEALVMVQTEKI 193
Query: 68 GSELPVPFLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+ P+ ++ F+ L+D++ D + G ++ ++V L+ + D +EA+ + +
Sbjct: 194 -RKFPI---ILIGKEFWGGLVDWIRDRLVEEGMISPEDV-DLFHVTDDPAEAVRICVDAH 248
Query: 127 D 127
D
Sbjct: 249 D 249
>gi|298345292|ref|YP_003717979.1| Rossmann fold nucleotide-binding protein [Mobiluncus curtisii ATCC
43063]
gi|304390849|ref|ZP_07372801.1| methionyl-tRNA formyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|298235353|gb|ADI66485.1| Rossmann fold nucleotide-binding protein [Mobiluncus curtisii ATCC
43063]
gi|304325732|gb|EFL92978.1| methionyl-tRNA formyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 239
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 14/107 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A A VALPGG GTLDE+FE + L Q +I P
Sbjct: 136 VEFRYFFVRKTMFVKYA--------QAFVALPGGFGTLDELFECVTLRQTSKIQQ---YP 184
Query: 75 FLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALS 120
+++ +D F+ LL ++ G V+ DEV + ++ ++ +EAL+
Sbjct: 185 IVLVGHD-FWDGLLGWVRQHLVAEGMVSPDEV-DIIQVVETAAEALA 229
>gi|343926930|ref|ZP_08766423.1| hypothetical protein GOALK_072_01520 [Gordonia alkanivorans NBRC
16433]
gi|343763290|dbj|GAA13349.1| hypothetical protein GOALK_072_01520 [Gordonia alkanivorans NBRC
16433]
Length = 274
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A A V LPGG+GTLDE+FE L L+Q +++ + P
Sbjct: 158 MNFRYFFVRKTMFVKYA--------QAFVCLPGGMGTLDELFEALTLVQTKKV---VRFP 206
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
+++ D F+ LLD++ D
Sbjct: 207 IVLVGSD-FWGGLLDWMRDV 225
>gi|409358119|ref|ZP_11236482.1| hypothetical protein Dali7_09674 [Dietzia alimentaria 72]
Length = 266
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R+F RK + A V PGG GTLDE FE + L+Q ++I + P+ L
Sbjct: 146 FRYFFVRKTMFVKYT--------QAFVCTPGGFGTLDEFFEAITLVQTDKI-TRFPIVLL 196
Query: 77 VMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 135
++ F+ L++++ G + G ++ ++ L + DS EA+ Y+ ++ +++
Sbjct: 197 GVD---FWSPLVEWIRGTLAEQGMISASDL-DLMMVTDSVPEAVEYIRRAHNRAAVTTEQ 252
Query: 136 HEVNLKSTH 144
E H
Sbjct: 253 REDQFGVEH 261
>gi|347754931|ref|YP_004862495.1| hypothetical protein [Candidatus Chloracidobacterium thermophilum
B]
gi|347587449|gb|AEP11979.1| conserved hypothetical protein, DprA/Smf-related, family 2
[Candidatus Chloracidobacterium thermophilum B]
Length = 161
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 1 MLSPKVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILA 60
+L +V+ ++ +Q+ R RK +++ + A VALPGG+GTLDE+FEI
Sbjct: 48 LLEREVIYREVTQMYVTRTMHERKARMMELS--------DAFVALPGGIGTLDELFEIWT 99
Query: 61 LIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKD 103
QL P ++N +Y LL FL G +A D
Sbjct: 100 WRQL----GYHSKPVGLLNVAGYYDGLLGFLDRAVQEGFLAPD 138
>gi|256374922|ref|YP_003098582.1| hypothetical protein Amir_0774 [Actinosynnema mirum DSM 43827]
gi|255919225|gb|ACU34736.1| conserved hypothetical protein [Actinosynnema mirum DSM 43827]
Length = 255
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 22/124 (17%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK I + A + LPGG GTLDE+FE L L+Q +++ ++ PV
Sbjct: 149 VNFRYFFVRKTMFIKYS--------QAFICLPGGFGTLDELFEALTLVQTKKV-TKFPV- 198
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
V+ S+++ L D++ +D V KI D + L + D + +
Sbjct: 199 --VLFGRSYWQGLYDWV----------RDSVLGSGKIGDKDLALLHLTDDVEDAVRVVRE 246
Query: 135 VHEV 138
H+
Sbjct: 247 AHQA 250
>gi|384219746|ref|YP_005610912.1| hypothetical protein BJ6T_60700 [Bradyrhizobium japonicum USDA 6]
gi|354958645|dbj|BAL11324.1| hypothetical protein BJ6T_60700 [Bradyrhizobium japonicum USDA 6]
Length = 201
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL 91
A VALPGGVGTL+E+ E L QL R P L+ N+D+F++ LL L
Sbjct: 103 AFVALPGGVGTLEELVEQLTWKQLGRHAK----PVLLANFDNFWEPLLSLL 149
>gi|227875867|ref|ZP_03993993.1| Rossmann fold nucleotide-binding protein [Mobiluncus mulieris ATCC
35243]
gi|269977502|ref|ZP_06184474.1| lysine decarboxylase family protein [Mobiluncus mulieris 28-1]
gi|306819148|ref|ZP_07452862.1| methionyl-tRNA formyltransferase [Mobiluncus mulieris ATCC 35239]
gi|307700012|ref|ZP_07637061.1| TIGR00730 family protein [Mobiluncus mulieris FB024-16]
gi|227843615|gb|EEJ53798.1| Rossmann fold nucleotide-binding protein [Mobiluncus mulieris ATCC
35243]
gi|269934418|gb|EEZ90980.1| lysine decarboxylase family protein [Mobiluncus mulieris 28-1]
gi|304648124|gb|EFM45435.1| methionyl-tRNA formyltransferase [Mobiluncus mulieris ATCC 35239]
gi|307614773|gb|EFN93993.1| TIGR00730 family protein [Mobiluncus mulieris FB024-16]
Length = 241
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 20/114 (17%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A A V LPGG GTLDE+FE + L+Q +I + P+
Sbjct: 138 VEFRYFFVRKTMFVKYA--------QAFVVLPGGFGTLDELFEAITLVQTHKI-KQFPIV 188
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKD----EVASLWKICDSNSEALSYLAE 124
+ +Y + LL ++ D G VA+ E + ++ D+ +EA + E
Sbjct: 189 LVGKDY---WSGLLGWVRD----GLVAQGMVDLEETGIIQVVDTAAEAQRIVVE 235
>gi|183220422|ref|YP_001838418.1| putative Rossmann fold nucleotide-binding protein [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
gi|189910535|ref|YP_001962090.1| rossmann fold nucleotide-binding protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167775211|gb|ABZ93512.1| Rossmann fold nucleotide-binding protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167778844|gb|ABZ97142.1| Putative Rossmann fold nucleotide-binding protein [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Length = 254
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
++A PGG GT DE+FE L L+Q G + P+P L+ F+ ++++F E +
Sbjct: 163 GMIAFPGGFGTFDELFETLTLVQ---TGKKSPIPILLYG-KKFWSEVINFKKLAEM--RL 216
Query: 101 AKDEVASLWKICDSNSEALSYLAE 124
+E L+ DS EAL + E
Sbjct: 217 ISEEDLHLFGYADSPIEALRFFQE 240
>gi|72382301|ref|YP_291656.1| dape gene and orf2 [Prochlorococcus marinus str. NATL2A]
gi|72002151|gb|AAZ57953.1| putative dape gene and orf2 [Prochlorococcus marinus str. NATL2A]
Length = 282
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
+F+ RK + +V A V PGG GT DE+FE+L L Q G + +P +
Sbjct: 189 FNYFALRKFHFVMRSV--------AAVFFPGGFGTFDELFELLTLRQ---TGMKTEIPII 237
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEA 118
+ D ++ K+++F D G ++ DE L++ DS SEA
Sbjct: 238 LFGRD-YWSKVINFQF-LSDHGLIS-DEHMKLFQYADSASEA 276
>gi|260577605|ref|ZP_05845543.1| lysine decarboxylase [Corynebacterium jeikeium ATCC 43734]
gi|258604258|gb|EEW17497.1| lysine decarboxylase [Corynebacterium jeikeium ATCC 43734]
Length = 270
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 18/121 (14%)
Query: 12 SQLVDL----RFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERI 67
+Q VDL R+F RK + + A + LPGG GTLDE+FE L ++Q E+I
Sbjct: 127 NQWVDLGLNFRYFFVRKTMFLKYS--------QAFICLPGGYGTLDELFEALVMVQTEKI 178
Query: 68 GSELPVPFLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+ P+ ++ F+ L+D++ D + G ++ ++V L+ + D +EA+ + +
Sbjct: 179 -RKFPI---ILIGKEFWGGLVDWIRDRLVEEGMISPEDV-DLFHVTDDPAEAVRICVDAH 233
Query: 127 D 127
D
Sbjct: 234 D 234
>gi|224369436|ref|YP_002603600.1| hypothetical protein HRM2_23410 [Desulfobacterium autotrophicum
HRM2]
gi|223692153|gb|ACN15436.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 228
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 14/112 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ +F RK I A A V +PGG GTLDE+FE + LIQ RI P+P
Sbjct: 124 MEFNYFFIRKVMFIKYA--------QAYVIIPGGFGTLDELFEAVTLIQTHRIK---PLP 172
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
+++ D ++ L+D++ D G ++ + + ++K+ D E ++ + E+
Sbjct: 173 VILVGSD-YWSGLVDWIRASLLDNGMISPENL-DIFKVLDDPQEIVNAVLEY 222
>gi|374385103|ref|ZP_09642613.1| TIGR00730 family protein [Odoribacter laneus YIT 12061]
gi|373226633|gb|EHP48956.1| TIGR00730 family protein [Odoribacter laneus YIT 12061]
Length = 187
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 13/111 (11%)
Query: 26 GLIDCAVRNDSCDRT--------AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
GL + + +D +R A +A+PGG GTL+E+ E++ L QL P +
Sbjct: 76 GLTELVITSDMKERKQKMRETADAFLAMPGGWGTLEEITEVITLKQLGIHNK----PVIF 131
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
+N + FY F+ + G +A L+KI + E YL E DL
Sbjct: 132 LNIEGFYDSFFSFIQESTRGGFIA-PVYEKLYKIARTVPEVFPYLKEEKDL 181
>gi|379734435|ref|YP_005327940.1| hypothetical protein BLASA_0951 [Blastococcus saxobsidens DD2]
gi|378782241|emb|CCG01901.1| conserved protein of unknown function [Blastococcus saxobsidens
DD2]
Length = 275
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 14/109 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ R+F RK + A A V LPGG GTLDE+FE L L+Q ++ + PV
Sbjct: 154 ISFRYFFVRKTMFVKYA--------QAFVILPGGFGTLDELFEALTLVQTRKV-TRFPVI 204
Query: 75 FLVMNYDSFYKKLLDFLGDCE-DWGTVAKDEVASLWKICDSNSEALSYL 122
L Y + L+D++ D GT++ ++ L+ + D +EA++ +
Sbjct: 205 LLGTAY---WSGLVDWIRDTMLAGGTISPGDL-DLFTVTDDVAEAVALI 249
>gi|53716741|ref|YP_104993.1| decarboxylase family protein [Burkholderia mallei ATCC 23344]
gi|121596879|ref|YP_990924.1| decarboxylase [Burkholderia mallei SAVP1]
gi|126446065|ref|YP_001077389.1| decarboxylase family protein [Burkholderia mallei NCTC 10247]
gi|238562385|ref|ZP_00440483.2| decarboxylase family protein [Burkholderia mallei GB8 horse 4]
gi|254359435|ref|ZP_04975707.1| conserved hypothetical protein TIGR00730 [Burkholderia mallei
2002721280]
gi|52422711|gb|AAU46281.1| decarboxylase family protein [Burkholderia mallei ATCC 23344]
gi|121224677|gb|ABM48208.1| decarboxylase family protein [Burkholderia mallei SAVP1]
gi|126238919|gb|ABO02031.1| decarboxylase family protein [Burkholderia mallei NCTC 10247]
gi|148028622|gb|EDK86582.1| conserved hypothetical protein TIGR00730 [Burkholderia mallei
2002721280]
gi|238522679|gb|EEP86122.1| decarboxylase family protein [Burkholderia mallei GB8 horse 4]
Length = 319
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 14/99 (14%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I + LPV V+
Sbjct: 223 YFAIRKLHLLERA--------KAAVFFPGGYGTCDELFEVLTLLQTRKI-APLPV---VL 270
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
+F++ +DF G D G + + A+L++ C++ E
Sbjct: 271 VSRAFWRSAVDF-GFLVDEGMIDPCD-AALFRFCETADE 307
>gi|359689883|ref|ZP_09259884.1| hypothetical protein LlicsVM_15897 [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418748542|ref|ZP_13304834.1| TIGR00730 family protein [Leptospira licerasiae str. MMD4847]
gi|418757575|ref|ZP_13313762.1| TIGR00730 family protein [Leptospira licerasiae serovar Varillal
str. VAR 010]
gi|384115352|gb|EIE01610.1| TIGR00730 family protein [Leptospira licerasiae serovar Varillal
str. VAR 010]
gi|404275611|gb|EJZ42925.1| TIGR00730 family protein [Leptospira licerasiae str. MMD4847]
Length = 257
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 13/108 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ +F RK + ++ VVA PGG GT+DE+FE L LIQ R ++PV
Sbjct: 154 VEFHYFFMRKLWFLRLSM--------GVVAFPGGFGTVDELFETLTLIQTGRNNRKIPV- 204
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
++ F++++ L D+G + +++ L CD+ + L L
Sbjct: 205 --ILYGTKFWREIFH-LESMIDYGLIEAEDL-ELITYCDTPEDVLETL 248
>gi|387906435|ref|YP_006336772.1| decarboxylase [Burkholderia sp. KJ006]
gi|387581327|gb|AFJ90041.1| Decarboxylase family protein [Burkholderia sp. KJ006]
Length = 330
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 58/108 (53%), Gaps = 14/108 (12%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I P+P +++
Sbjct: 217 YFAIRKLHLLERA--------KAAVFFPGGYGTFDELFEVLTLLQTRKIA---PLPVILV 265
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
++++++ +D L D G + + ++ L+ C++ E + +Y
Sbjct: 266 G-EAYWRRAVD-LPFLADEGMIDRRDL-ELFTYCETAPEIWHAIGNWY 310
>gi|144900110|emb|CAM76974.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 297
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDE+FE L LIQ +I P+P +VM +++++++F +
Sbjct: 214 ALVVFPGGFGTLDELFEALTLIQTGKIE---PIP-VVMFGREYWERVINFDAMAMEGMIG 269
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLS 129
D+ L ++ EA +A+FY L
Sbjct: 270 PHDK--DLLTFVETAEEAWHIIADFYRLP 296
>gi|347525871|ref|YP_004832619.1| hypothetical protein LRC_14320 [Lactobacillus ruminis ATCC 27782]
gi|345284830|gb|AEN78683.1| Conserved hypothetical protein, possible decarboxylase
[Lactobacillus ruminis ATCC 27782]
Length = 194
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 13/115 (11%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+++L+ + S RK +I+ + C V PGG+GT++E F+ + QL +
Sbjct: 83 QTELIHVSDMSDRKKQMIELS----DC----FVVFPGGLGTMEEFFQTYSWFQLGIVQK- 133
Query: 71 LPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
P +++N D +Y L++FL + G + K+ V +L I D + S +EF
Sbjct: 134 ---PIILVNIDGYYNDLINFLKHSAETGFMPKENVDALI-IGDDLPDLFSKASEF 184
>gi|309790794|ref|ZP_07685339.1| hypothetical protein OSCT_1290 [Oscillochloris trichoides DG-6]
gi|308227165|gb|EFO80848.1| hypothetical protein OSCT_1290 [Oscillochloris trichoides DG6]
Length = 246
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 13/70 (18%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ R+F RK + A +A V PGG GTLDE+FE L LIQ RI +
Sbjct: 128 IRFRYFFVRKTMFVKYA--------SAFVIFPGGFGTLDELFEALTLIQTSRIHN----- 174
Query: 75 FLVMNYDSFY 84
F V+ YDS Y
Sbjct: 175 FPVILYDSAY 184
>gi|255536498|ref|YP_003096869.1| hypothetical protein FIC_02374 [Flavobacteriaceae bacterium
3519-10]
gi|255342694|gb|ACU08807.1| hypothetical protein FIC_02374 [Flavobacteriaceae bacterium
3519-10]
Length = 252
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
+ +PGG GTLDE+ E + LIQ +IG + P+ V+ F+ LL+ F G
Sbjct: 162 GFIVMPGGFGTLDELTEAITLIQTNKIG-KFPI---VLVGTEFWSGLLEWFQKTLLKTGM 217
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYDLSSID 132
+++ ++ L++I D+ +A++++ FYD +++
Sbjct: 218 ISEADL-KLYRIVDTADDAVAHIKAFYDKYTVN 249
>gi|124025884|ref|YP_001015000.1| Rossmann fold nucleotide-binding protein [Prochlorococcus marinus
str. NATL1A]
gi|123960952|gb|ABM75735.1| Predicted Rossmann fold nucleotide-binding protein [Prochlorococcus
marinus str. NATL1A]
Length = 282
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
+F+ RK + +V A V PGG GT DE+FE+L L Q G + +P +
Sbjct: 189 FNYFALRKFHFVMRSV--------AAVFFPGGFGTFDELFELLTLRQ---TGMKTEIPII 237
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEA 118
+ D ++ K+++F D G ++ DE L++ DS SEA
Sbjct: 238 LFGRD-YWSKVINFQF-LSDHGLIS-DEHMKLFQYADSASEA 276
>gi|254176583|ref|ZP_04883241.1| decarboxylase family protein [Burkholderia mallei ATCC 10399]
gi|254202914|ref|ZP_04909276.1| conserved hypothetical protein TIGR00730 [Burkholderia mallei FMH]
gi|254208248|ref|ZP_04914597.1| conserved hypothetical protein TIGR00730 [Burkholderia mallei JHU]
gi|147745959|gb|EDK53037.1| conserved hypothetical protein TIGR00730 [Burkholderia mallei FMH]
gi|147750935|gb|EDK58003.1| conserved hypothetical protein TIGR00730 [Burkholderia mallei JHU]
gi|160697625|gb|EDP87595.1| decarboxylase family protein [Burkholderia mallei ATCC 10399]
Length = 292
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 14/99 (14%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I + LPV V+
Sbjct: 196 YFAIRKLHLLERA--------KAAVFFPGGYGTCDELFEVLTLLQTRKI-APLPV---VL 243
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
+F++ +DF G D G + + A+L++ C++ E
Sbjct: 244 VSRAFWRSAVDF-GFLVDEGMIDPCD-AALFRFCETADE 280
>gi|441165220|ref|ZP_20968550.1| hypothetical protein SRIM_31360 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440616106|gb|ELQ79261.1| hypothetical protein SRIM_31360 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 250
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 20/114 (17%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A V LPGG+GTLDE+FE L L+Q ++ + P+
Sbjct: 149 VNFRYFFVRKTMFVKYA--------QGFVVLPGGMGTLDELFEALTLVQTRKV-TRFPI- 198
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVAS----LWKICDSNSEALSYLAE 124
V+ ++ L+D+L D VA+ + + L+ + D EA++ +++
Sbjct: 199 --VLFGTEYWSGLVDWLRDT----VVAQGKASEHDLLLFHVTDDVDEAVALVSK 246
>gi|423226543|ref|ZP_17213008.1| TIGR00730 family protein [Bacteroides cellulosilyticus CL02T12C19]
gi|392629022|gb|EIY23038.1| TIGR00730 family protein [Bacteroides cellulosilyticus CL02T12C19]
Length = 195
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 9 KQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIG 68
K ++++++ RK + D + AV+ALPGG GTL+E+ EI+ QL G
Sbjct: 79 KGLTEMIEVENMHQRKQKMADLS--------DAVIALPGGCGTLEELLEIITWKQL---G 127
Query: 69 SELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
L P +++N + F+ LL L D + + ++W + + EA+ +
Sbjct: 128 LYLN-PVVILNTNGFFDPLLAMLQRAMD-ENFMRQQHGAIWHVASTPQEAVELI 179
>gi|358446547|ref|ZP_09157092.1| putative uncharacterized protein [Corynebacterium casei UCMA 3821]
gi|356607508|emb|CCE55432.1| putative uncharacterized protein [Corynebacterium casei UCMA 3821]
Length = 275
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 13/125 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + A V LPGG+GT+DE+FE+L ++Q ++ + P+
Sbjct: 161 INFRYFFARKTMFLKYS--------RAFVCLPGGMGTMDELFEMLCMVQTGKV-TNYPIV 211
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
+ Y + L++++G+ + L+ + DS EA+ ++ + D+R
Sbjct: 212 LIGTEY---WSGLVEWMGNTLVADGYINPQDMDLFLLTDSVDEAVEHIVAAHK-EMTDER 267
Query: 135 VHEVN 139
V +N
Sbjct: 268 VRRLN 272
>gi|296127478|ref|YP_003634730.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296019294|gb|ADG72531.1| conserved hypothetical protein [Brachyspira murdochii DSM 12563]
Length = 220
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ R+F ARK + A AV+ PGG GT+DE FE L LIQ + + +P
Sbjct: 117 LKFRYFFARKVMFLKYA--------KAVIIFPGGFGTMDEWFETLTLIQTKVLQR---MP 165
Query: 75 FLVMNYDSFYKKLLDFL 91
+VMN ++Y L+++L
Sbjct: 166 LIVMN-KNYYSDLIEWL 181
>gi|331694880|ref|YP_004331119.1| hypothetical protein Psed_1015 [Pseudonocardia dioxanivorans
CB1190]
gi|326949569|gb|AEA23266.1| Conserved hypothetical protein CHP00730 [Pseudonocardia
dioxanivorans CB1190]
Length = 254
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + A V LPGG GTLDE+FE L L+Q +++ ++ PV
Sbjct: 148 INFRYFFARKTMFVKYS--------QAFVCLPGGFGTLDELFEALTLVQTKKV-TKFPVV 198
Query: 75 FLVMNYDSFYKKLLDFL 91
L +Y ++ L D++
Sbjct: 199 LLGKDY---WQGLYDWI 212
>gi|289207232|ref|YP_003459298.1| hypothetical protein TK90_0045 [Thioalkalivibrio sp. K90mix]
gi|288942863|gb|ADC70562.1| conserved hypothetical protein [Thioalkalivibrio sp. K90mix]
Length = 241
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R F +RK + A +A V LPGG GTLDE+ EIL L+Q G +P +
Sbjct: 126 FRHFFSRKVMFVKYA--------SAYVVLPGGFGTLDELAEILTLVQ---TGKTRRIPIV 174
Query: 77 VMNYDSFYKKLLDFLGDC-EDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 135
++ + F+K LL + D GT+ +++ L+ + D+ + + + E Y+ S +
Sbjct: 175 LVGSE-FWKGLLHWFDDTLVSEGTIDAEDL-KLYSLVDAPEDVVDVIFEHYEARSFEPSA 232
Query: 136 HE 137
E
Sbjct: 233 EE 234
>gi|116671346|ref|YP_832279.1| hypothetical protein Arth_2800 [Arthrobacter sp. FB24]
gi|116611455|gb|ABK04179.1| conserved hypothetical protein 730 [Arthrobacter sp. FB24]
Length = 275
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 59/106 (55%), Gaps = 14/106 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + A + LPGG+GTLDE+FE + L+Q ++ + P+
Sbjct: 153 INFRYFFARKTMFVKYA--------QGFIVLPGGLGTLDELFEAMVLVQTRKV-TSFPI- 202
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEAL 119
V+ +F+ ++D++ G + G +++ ++ SL ++ D + A+
Sbjct: 203 --VLLGTAFWGPMIDWIRGTLVEDGMISEKDL-SLIQVVDEPAHAV 245
>gi|431796583|ref|YP_007223487.1| hypothetical protein Echvi_1206 [Echinicola vietnamensis DSM 17526]
gi|430787348|gb|AGA77477.1| TIGR00730 family protein [Echinicola vietnamensis DSM 17526]
Length = 243
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 63/119 (52%), Gaps = 15/119 (12%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+ +L+ +F RK + A + LPGG GT+DE+FE L L+Q ++ G +
Sbjct: 130 QDKLITFDYFFVRKVMFVKYA--------QGFIVLPGGFGTMDELFEALTLVQTKKTG-K 180
Query: 71 LPVPFLVMNYDSFYKKLLDFLGDC--EDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
P+ ++ F++ L++++ E ++ +++ L+ + D+ +EA+ + EFY+
Sbjct: 181 FPI---ILVGKEFWEGLIEWIKTIMLERHINISPEDM-ELFTLVDTATEAVEAIDEFYN 235
>gi|134291728|ref|YP_001115497.1| hypothetical protein Bcep1808_6342 [Burkholderia vietnamiensis G4]
gi|134134917|gb|ABO59242.1| conserved hypothetical protein 730 [Burkholderia vietnamiensis G4]
Length = 334
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 58/108 (53%), Gaps = 14/108 (12%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I P+P +++
Sbjct: 221 YFAIRKLHLLERA--------KAAVFFPGGYGTFDELFEVLTLLQTRKIA---PLPVILV 269
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
++++++ +D L D G + + ++ L+ C++ E + +Y
Sbjct: 270 G-EAYWRRAVD-LPFLADEGMIDRRDL-ELFTYCETAPEIWHAIGNWY 314
>gi|390956750|ref|YP_006420507.1| hypothetical protein Terro_0845 [Terriglobus roseus DSM 18391]
gi|390411668|gb|AFL87172.1| TIGR00730 family protein [Terriglobus roseus DSM 18391]
Length = 187
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 23/125 (18%)
Query: 25 HGLIDCAVRNDSCDRTAVV------------------ALPGGVGTLDEMFEILALIQLER 66
H L+D V N+ C VV LPGG GT +E+FE+LA L R
Sbjct: 68 HVLVDKEVSNNGCTELHVVDTMHTRKALMGQRADAFLILPGGYGTFEELFEVLAWETL-R 126
Query: 67 IGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+ S+ P ++N FY +L FL C G V K + + + D+ EAL+ +
Sbjct: 127 LHSK---PMCLLNTAGFYDGMLTFLDHCVAEG-VLKPKARGILLVADTVDEALAKIDAAL 182
Query: 127 DLSSI 131
+S+
Sbjct: 183 QAASV 187
>gi|345886304|ref|ZP_08837562.1| hypothetical protein HMPREF0178_00336 [Bilophila sp. 4_1_30]
gi|345038622|gb|EGW43023.1| hypothetical protein HMPREF0178_00336 [Bilophila sp. 4_1_30]
Length = 216
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
D R+F RK + A+ A V +PGG+GT+DE+ E L Q +RI P+P
Sbjct: 115 DYRYFFLRKLMFVKYAL--------AYVVMPGGMGTIDELSEAFVLAQTKRI---RPLP- 162
Query: 76 LVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
+++ +F+ LD++ G + EV L +CD+ + + +
Sbjct: 163 IILYQSTFWNGFLDWVRSTMVSGGYIRASEVDDLITVCDTPEQVVQQI 210
>gi|443293947|ref|ZP_21033041.1| Conserved hypothetical protein [Micromonospora lupini str. Lupac
08]
gi|385882732|emb|CCH21192.1| Conserved hypothetical protein [Micromonospora lupini str. Lupac
08]
Length = 181
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 12/77 (15%)
Query: 20 FSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMN 79
++RK +ID R+D A +ALPGG+GTLDE+FE+ L P ++++
Sbjct: 87 MASRKTLMID---RSD-----AFLALPGGLGTLDELFEVWTTATLALHAK----PMVLID 134
Query: 80 YDSFYKKLLDFLGDCED 96
D FY+ LLD+L D
Sbjct: 135 ADGFYRPLLDWLTTLTD 151
>gi|409100057|ref|ZP_11220081.1| hypothetical protein PagrP_17198 [Pedobacter agri PB92]
Length = 235
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 23/122 (18%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
++L++ +F RK + + V LPGG GT+DE+FE L LIQ +I +
Sbjct: 123 NKLLEFDYFFVRKVMFMKYS--------QGFVVLPGGFGTMDELFEALTLIQTGKI-ARF 173
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAK------DEVASLWKICDSNSEALSYLAEF 125
P+ L +Y + L++++ GT+ + +E +L+++ D+ EA ++ F
Sbjct: 174 PIVLLGKDY---WSGLIEWIK-----GTMLQKEHNIHEEDLNLFRLVDTAEEAAEHIFRF 225
Query: 126 YD 127
YD
Sbjct: 226 YD 227
>gi|336323883|ref|YP_004603850.1| hypothetical protein Flexsi_1633 [Flexistipes sinusarabici DSM
4947]
gi|336107464|gb|AEI15282.1| Conserved hypothetical protein CHP00730 [Flexistipes sinusarabici
DSM 4947]
Length = 222
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 13 QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELP 72
+++ +F RK L+ A +A V PGG GT+DE+FE + LIQ +I LP
Sbjct: 119 KVITFNYFFVRKVMLVKYA--------SAFVIFPGGFGTMDELFEAMTLIQTRKI---LP 167
Query: 73 VPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
P +++ D ++ ++++L D + + K+ D E L + F
Sbjct: 168 FPLILVEKD-YWSGMINWLEDKMVGNNFISESDLDIIKLIDDPPEILDCIKNF 219
>gi|416935348|ref|ZP_11933957.1| putative Rossmann fold nucleotide-binding protein [Burkholderia sp.
TJI49]
gi|325525195|gb|EGD03065.1| putative Rossmann fold nucleotide-binding protein [Burkholderia sp.
TJI49]
Length = 264
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 58/108 (53%), Gaps = 14/108 (12%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I P+P +++
Sbjct: 151 YFAIRKLHLLERA--------KAAVFFPGGYGTFDELFEVLTLLQTRKIA---PLPVILV 199
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
++++++ +D L D G + + ++ L+ C+S + + +Y
Sbjct: 200 G-EAYWRRAVD-LAFLADEGMIDRRDL-ELFTYCESAAAIWHAIGSWY 244
>gi|124505407|ref|XP_001351445.1| lysine decarboxylase-like protein, putative [Plasmodium falciparum
3D7]
gi|23498203|emb|CAD49174.1| lysine decarboxylase-like protein, putative [Plasmodium falciparum
3D7]
Length = 338
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 19/120 (15%)
Query: 9 KQESQLVD------LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALI 62
K +Q VD +F RK LI ++ A + LPGG GTLDE+ EIL L
Sbjct: 214 KGANQYVDRNLSFKFHYFFTRKFWLIYLSL--------AFIVLPGGFGTLDELMEILTLK 265
Query: 63 QLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
Q ++ +P+ V+ F+ +L+F ++G +++D++ ++ I D EA +++
Sbjct: 266 QCKKFKRNVPI---VLIGKDFWSGILNF-KKLAEYGLISQDDLNGIF-ITDCIDEAYNHV 320
>gi|323341462|ref|ZP_08081703.1| decarboxylase [Lactobacillus ruminis ATCC 25644]
gi|417974525|ref|ZP_12615340.1| hypothetical protein ANHS_2027 [Lactobacillus ruminis ATCC 25644]
gi|323091073|gb|EFZ33704.1| decarboxylase [Lactobacillus ruminis ATCC 25644]
gi|346329096|gb|EGX97400.1| hypothetical protein ANHS_2027 [Lactobacillus ruminis ATCC 25644]
Length = 194
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 13/115 (11%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+++L+ + S RK +I+ + C V PGG+GT++E F+ + QL +
Sbjct: 83 QTELIHVSDMSDRKKQMIELS----DC----FVVFPGGLGTMEEFFQTYSWFQLGIVQK- 133
Query: 71 LPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
P +++N D +Y L++FL + G + K+ V +L I D + S +EF
Sbjct: 134 ---PIILVNIDGYYNDLINFLKHSAETGFMPKENVDALI-IGDDLPDLFSKASEF 184
>gi|335997028|ref|ZP_08562945.1| lysine decarboxylase [Lactobacillus ruminis SPM0211]
gi|335352098|gb|EGM53589.1| lysine decarboxylase [Lactobacillus ruminis SPM0211]
Length = 194
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 13/115 (11%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+++L+ + S RK +I+ + V PGG+GT++E F+ + QL +
Sbjct: 83 QTELIHVSDMSDRKKRMIELS--------DCFVVFPGGLGTMEEFFQTYSWFQLGIVQK- 133
Query: 71 LPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 125
P +++N D +Y L++FL + G + K+ V +L I D + S +EF
Sbjct: 134 ---PIILVNIDGYYNDLINFLKHSAETGFMPKENVDALI-IGDDLPDLFSKASEF 184
>gi|453050524|gb|EME98060.1| hypothetical protein H340_23428 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 249
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
VD R+F RK + A + V LPGG+GTLDE+FE L L+Q +++ + P+
Sbjct: 148 VDFRYFFVRKTMFVKYA--------SGFVVLPGGLGTLDELFEALTLVQTKKV-TRFPI- 197
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALS 120
V+ ++ L+ ++ D G L+ + D EA++
Sbjct: 198 --VLFGSEYWSGLVRWIEDTLVAGGKVGAHDLQLFHVTDDVEEAIA 241
>gi|423342523|ref|ZP_17320237.1| TIGR00730 family protein [Parabacteroides johnsonii CL02T12C29]
gi|409217440|gb|EKN10416.1| TIGR00730 family protein [Parabacteroides johnsonii CL02T12C29]
Length = 204
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 21/134 (15%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
P+ + +Q+ + LV++ RK + D + AV+ALPGG GTL+E+ E
Sbjct: 77 PRFMVEQDWCHKGLTDLVEVDSMHERKQRMADLS--------DAVIALPGGCGTLEELLE 128
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
++ QL G L P +++N + ++ LL+ D + + A+LW + + +E
Sbjct: 129 VITWKQL---GLYLN-PIVILNINGYFDPLLEMFRRAVD-EHFMRPQHAALWAVASTPAE 183
Query: 118 A--LSYLAEFYDLS 129
A L Y +D S
Sbjct: 184 AVELIYAEPVWDAS 197
>gi|408829456|ref|ZP_11214346.1| hypothetical protein SsomD4_19834 [Streptomyces somaliensis DSM
40738]
Length = 251
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 12/110 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A V LPGG+GTLDE+FE L L+Q ++ + P+
Sbjct: 150 VNFRYFFVRKTMFVKYA--------QGFVVLPGGLGTLDELFEALTLVQTRKV-TRFPI- 199
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
V+ ++ L+D+L D A + L+ + D EA++ +++
Sbjct: 200 --VLFGTEYWSGLVDWLRDTVVAQGKASEHDLMLFHVTDDVDEAVALVSK 247
>gi|375149209|ref|YP_005011650.1| hypothetical protein [Niastella koreensis GR20-10]
gi|361063255|gb|AEW02247.1| hypothetical protein Niako_6021 [Niastella koreensis GR20-10]
Length = 249
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A + +PGG GT+DE FE L L+Q + I ++ P+ V+ +Y L ++ GT+
Sbjct: 150 AFIIMPGGFGTMDEFFETLTLVQTKTI-TQFPI---VLFGKEYYSNLWNYAEFMALQGTI 205
Query: 101 AKDEVASLWKICDSNSEAL----SYLAEFYDLSS 130
++D++ L + DS EA+ +Y+++ Y + S
Sbjct: 206 SRDDM-KLVLLTDSIDEAMDHIRTYISQNYKVKS 238
>gi|389696069|ref|ZP_10183711.1| TIGR00730 family protein [Microvirga sp. WSM3557]
gi|388584875|gb|EIM25170.1| TIGR00730 family protein [Microvirga sp. WSM3557]
Length = 192
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 43 VALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAK 102
+ALPGG+GT +E+FE+ QL P ++N FY KL DFL D + G V
Sbjct: 101 IALPGGLGTFEELFEVWTWAQL----GYHRKPCALLNAGGFYDKLTDFLDDVVERGFVKP 156
Query: 103 DEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
A L I + AL Y+ +DK
Sbjct: 157 IHRAML--IVEEEPVALIAAVRAYEPPKVDK 185
>gi|261856278|ref|YP_003263561.1| hypothetical protein Hneap_1689 [Halothiobacillus neapolitanus c2]
gi|261836747|gb|ACX96514.1| conserved hypothetical protein [Halothiobacillus neapolitanus c2]
Length = 239
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 16/117 (13%)
Query: 13 QLVDLRF--FSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
Q + L F F ARK + A +A V +PGG GTLDEM EIL L+Q G
Sbjct: 118 QDISLHFQHFFARKVMFVKYA--------SAYVVMPGGFGTLDEMAEILTLVQ---TGKS 166
Query: 71 LPVPFLVMNYDSFYKKLLD-FLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+P +++ +F+ LL+ F GT+ + ++ L +CD +S + +FY
Sbjct: 167 RRIPIILVG-TAFWSGLLNWFKQTLLTEGTIGEGDM-DLMTVCDEPQTVVSTIFDFY 221
>gi|399043105|ref|ZP_10737530.1| TIGR00730 family protein [Rhizobium sp. CF122]
gi|398058352|gb|EJL50250.1| TIGR00730 family protein [Rhizobium sp. CF122]
Length = 183
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGS 69
Q ++L+ RKH + + R+D A VALPGG+GTL+E+ EI+ QL R
Sbjct: 62 QLNELIVTPDMHTRKHAMFE---RSD-----AFVALPGGIGTLEEIVEIMTWAQLGR--H 111
Query: 70 ELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLS 129
E P+ F N F+ +++ + D G V I D + +A+ +++
Sbjct: 112 EKPMVFA--NIGGFWDPMMELMRHMTDEGFVHTAHRVQPLVIDDISEIIPGIVAQAAEIA 169
Query: 130 SIDK 133
S+D+
Sbjct: 170 SLDR 173
>gi|393782544|ref|ZP_10370727.1| TIGR00730 family protein [Bacteroides salyersiae CL02T12C01]
gi|392672771|gb|EIY66237.1| TIGR00730 family protein [Bacteroides salyersiae CL02T12C01]
Length = 195
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
++LV++ RK + D + AV+ALPGG GTL+E+ E++ QL G L
Sbjct: 82 TRLVEVESMHERKQLMADLS--------DAVIALPGGCGTLEELLEVITWKQL---GLYL 130
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEA--LSYLAEFYDLS 129
P +++N + F+ LLD L D + + +W + + EA L Y +D S
Sbjct: 131 N-PIVILNTNDFFDPLLDQLKRAID-ENFMRRQHGDIWHVAATPEEAVELVYRVPVWDAS 188
>gi|452126209|ref|ZP_21938792.1| lysine decarboxylase [Bordetella holmesii F627]
gi|452129577|ref|ZP_21942152.1| lysine decarboxylase [Bordetella holmesii H558]
gi|451921304|gb|EMD71449.1| lysine decarboxylase [Bordetella holmesii F627]
gi|451923212|gb|EMD73354.1| lysine decarboxylase [Bordetella holmesii H558]
Length = 221
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLG-DCEDWGT 99
A V++PGG GTLDE+FE L LIQ ++ P P +++ + F+ ++D++G G
Sbjct: 124 AYVSMPGGFGTLDELFEALTLIQTGKV---PPAPIVLVGSE-FWHGMIDWMGAQLLGNGM 179
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFY 126
+ ++ L+ I D +A+ ++ EF+
Sbjct: 180 IGAHDL-DLFIIEDDPEKAVRHIVEFH 205
>gi|15606913|ref|NP_214294.1| hypothetical protein aq_1884 [Aquifex aeolicus VF5]
gi|2984162|gb|AAC07696.1| hypothetical protein aq_1884 [Aquifex aeolicus VF5]
Length = 250
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 9 KQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIG 68
K +++ + ++F RK L+ A+ A V PGG GT DE+FE L LIQ G
Sbjct: 113 KYQTKNLKFKYFFVRKVMLLKYAM--------AYVIFPGGFGTFDELFEALTLIQ---TG 161
Query: 69 SELPVPFLVMNYDSFYKKLLDFLGDCE-DWGTVAKDEV 105
P L++ +Y LL F+ + +GT+ K+++
Sbjct: 162 KSHKFP-LILFGSEYYSHLLKFMEEVMVKFGTIDKEDI 198
>gi|359426872|ref|ZP_09217949.1| hypothetical protein GOAMR_69_00500 [Gordonia amarae NBRC 15530]
gi|358237807|dbj|GAB07531.1| hypothetical protein GOAMR_69_00500 [Gordonia amarae NBRC 15530]
Length = 267
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A A V LPGG GTLDE+FE L L+Q +++G P
Sbjct: 155 MNFRYFFVRKTMFVKYA--------QAFVCLPGGFGTLDELFEALTLVQTKKVGR---FP 203
Query: 75 FLVMNYDSFYKKLLDFL 91
+++ D ++ L+D+L
Sbjct: 204 IVLVGRD-YWGGLIDWL 219
>gi|226195639|ref|ZP_03791226.1| conserved hypothetical protein TIGR00730 [Burkholderia pseudomallei
Pakistan 9]
gi|225932124|gb|EEH28124.1| conserved hypothetical protein TIGR00730 [Burkholderia pseudomallei
Pakistan 9]
Length = 328
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 14/99 (14%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I + LPV V+
Sbjct: 232 YFAIRKLHLLERA--------KAAVFFPGGYGTCDELFEVLTLLQTRKI-APLPV---VL 279
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
+F++ +DF G D G + + A+L++ C++ E
Sbjct: 280 VGRAFWRSAVDF-GFLVDEGMIDPCD-AALFRFCETADE 316
>gi|254184730|ref|ZP_04891319.1| decarboxylase family protein [Burkholderia pseudomallei 1655]
gi|184215322|gb|EDU12303.1| decarboxylase family protein [Burkholderia pseudomallei 1655]
Length = 317
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 14/99 (14%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I + LPV V+
Sbjct: 221 YFAIRKLHLLERA--------KAAVFFPGGYGTCDELFEVLTLLQTRKI-TPLPV---VL 268
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
+F++ +DF G D G + + A+L++ C++ E
Sbjct: 269 VGRAFWRSAVDF-GFLVDEGMIDPCD-AALFRFCETADE 305
>gi|409195861|ref|ZP_11224524.1| hypothetical protein MsalJ2_02382 [Marinilabilia salmonicolor JCM
21150]
Length = 192
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 34/50 (68%), Gaps = 4/50 (8%)
Query: 40 TAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD 89
+ ++ALPGG GTL+E+FE+++L +L + P P +V+N + +Y +L
Sbjct: 99 SGILALPGGTGTLEELFEVMSLKKL----GQYPHPIVVLNTNGYYDGMLQ 144
>gi|357976715|ref|ZP_09140686.1| hypothetical protein SpKC8_14511 [Sphingomonas sp. KC8]
Length = 296
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 12/97 (12%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDF---LGDCEDW 97
AV PGG GT DE FE+L LIQ G P+P L D F+ +++DF +G+
Sbjct: 204 AVAVFPGGFGTFDETFELLTLIQ---TGKMKPLPILFFGKD-FWTRVVDFDALVGE---- 255
Query: 98 GTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
G ++ +++ L++ ++ +A ++ ++ ++R
Sbjct: 256 GVISPNDL-KLFRFVETADDAWEHVTAYWAKREAERR 291
>gi|384197146|ref|YP_005582890.1| hypothetical protein HMPREF9228_1051 [Bifidobacterium breve
ACS-071-V-Sch8b]
gi|333110879|gb|AEF27895.1| TIGR00730 family protein [Bifidobacterium breve ACS-071-V-Sch8b]
Length = 300
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R+F RK + + + V+ PGG GTLDEMFE+L L+Q ++ + +P +
Sbjct: 202 FRYFFVRKTMFVKYS--------SGVIVCPGGFGTLDEMFELLTLVQTHKVAN---IPVV 250
Query: 77 VMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEAL 119
+ D +++ L D+L G + G ++K + L + D EA+
Sbjct: 251 LYGKD-YWQGLFDWLDGPVAERGMISKID-PKLVTVTDDADEAV 292
>gi|148241836|ref|YP_001226993.1| Rossmann fold nucleotide-binding protein [Synechococcus sp. RCC307]
gi|147850146|emb|CAK27640.1| Predicted Rossmann fold nucleotide-binding protein [Synechococcus
sp. RCC307]
Length = 353
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+ +L+ R F RK + + A+V +PGG GTLDE+FE L LIQ +
Sbjct: 148 DEKLLTFRHFHTRKLFFLR--------ETDAIVVMPGGFGTLDELFEGLTLIQTSK-NPP 198
Query: 71 LPVPFLVMNYDSFYKKLLDFLGDC-EDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+P+ L D ++++ ++ D G ++ ++ L+ + EAL + +FY
Sbjct: 199 VPIVLLCPQGDDYWERWHSYVDRALLDRGLISAED-NGLYTTASTAEEALHQIQDFY 254
>gi|408788805|ref|ZP_11200519.1| hypothetical protein C241_23395 [Rhizobium lupini HPC(L)]
gi|408485243|gb|EKJ93583.1| hypothetical protein C241_23395 [Rhizobium lupini HPC(L)]
Length = 206
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGS 69
Q ++LV + RKH + + R+D A V LPGGVGTL+E+ EI+ QL R
Sbjct: 87 QLNELVITKDMHERKHMMFE---RSD-----AFVTLPGGVGTLEEIVEIMTWAQLGRHAK 138
Query: 70 ELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAK 102
P + N + F+ +L+ + D G + +
Sbjct: 139 ----PMVFANINGFWNPMLELVQHMRDQGFIHR 167
>gi|309813196|ref|ZP_07706917.1| TIGR00730 family protein [Dermacoccus sp. Ellin185]
gi|308432792|gb|EFP56703.1| TIGR00730 family protein [Dermacoccus sp. Ellin185]
Length = 302
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 14/121 (11%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + + LPGGVGTLDEMFE + L+Q +++ + P+
Sbjct: 191 VNFRYFFVRKTVFVKYT--------QGAIVLPGGVGTLDEMFEAITLVQTQKV-THYPI- 240
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
V+ +F+ L ++L G +++ +V + I D+ EA++++ + + + +
Sbjct: 241 --VLVGTAFWSPLREWLRATVLAEGMISERDVDRM-VIVDTAEEAIAFIRDAHRAARAGE 297
Query: 134 R 134
R
Sbjct: 298 R 298
>gi|392551695|ref|ZP_10298832.1| lysine decarboxylase family protein [Pseudoalteromonas spongiae
UST010723-006]
Length = 213
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 5 KVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQL 64
+V ++Q +D R+F RK + ++ + +PGG GTLDE FE L L+Q
Sbjct: 98 QVPNPYQNQPLDFRYFFTRKVMFLKYSM--------GYICMPGGFGTLDETFESLTLLQT 149
Query: 65 ERIGSELPVPFLVMNYDSFYKKLLDFL 91
RI S++P+ V+ F++ L+D++
Sbjct: 150 GRI-SKMPI---VLFGSEFWQGLVDWM 172
>gi|365836419|ref|ZP_09377813.1| TIGR00730 family protein [Hafnia alvei ATCC 51873]
gi|364564217|gb|EHM41991.1| TIGR00730 family protein [Hafnia alvei ATCC 51873]
Length = 189
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
+ALPGG+GTL+E+FEI Q IG P +M+ + +Y KL++FL D G V
Sbjct: 101 GFIALPGGIGTLEELFEIWTWSQ---IGYHTK-PIALMDVNGYYAKLIEFLRFSADQGFV 156
Query: 101 AKDEVASL 108
+ + +L
Sbjct: 157 RQQYIDTL 164
>gi|418295887|ref|ZP_12907731.1| hypothetical protein ATCR1_00150 [Agrobacterium tumefaciens
CCNWGS0286]
gi|355539319|gb|EHH08557.1| hypothetical protein ATCR1_00150 [Agrobacterium tumefaciens
CCNWGS0286]
Length = 206
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGS 69
Q ++LV + RKH + + R+D A V LPGGVGTL+E+ EI+ QL R
Sbjct: 87 QLNELVITKDMHERKHMMFE---RSD-----AFVTLPGGVGTLEEIVEIMTWAQLGRHAK 138
Query: 70 ELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAK 102
P + N + F+ +L+ + D G + +
Sbjct: 139 ----PMVFANINGFWNPMLELVQHMRDQGFIHR 167
>gi|347536519|ref|YP_004843944.1| hypothetical protein FBFL15_1644 [Flavobacterium branchiophilum
FL-15]
gi|345529677|emb|CCB69707.1| Protein of unknown function [Flavobacterium branchiophilum FL-15]
Length = 188
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 14/124 (11%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
++L++++ RK + + + A VALPGG GT++E FE+L QL
Sbjct: 79 TKLIEVKTMHERKAKMFELS--------DAFVALPGGFGTIEETFEMLTWAQL----GLH 126
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSI 131
P ++N + FY L++F+ + + G + K E + IC+ N E L Y+ +
Sbjct: 127 QKPIALLNLNGFYDGLINFIQNIANNGLL-KPENKDMLLICN-NIEELFEKINHYNPKKV 184
Query: 132 DKRV 135
K +
Sbjct: 185 TKWI 188
>gi|300112965|ref|YP_003759540.1| hypothetical protein Nwat_0249 [Nitrosococcus watsonii C-113]
gi|299538902|gb|ADJ27219.1| conserved hypothetical protein [Nitrosococcus watsonii C-113]
Length = 271
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A++ PGG GTLDE+FE+L L+Q +I LP+ ++ +++ ++++F +
Sbjct: 179 AIIVFPGGFGTLDELFELLTLMQTGKIRKHLPI---ILFGKAYWNEVINFNALVQYSNID 235
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
+D L+ DS +EA ++L + +I++R
Sbjct: 236 PQD--LDLFYQTDSVNEAYAFLIDHLARYAIEER 267
>gi|291456566|ref|ZP_06595956.1| methionyl-tRNA formyltransferase [Bifidobacterium breve DSM 20213 =
JCM 1192]
gi|417943254|ref|ZP_12586506.1| Methionyl-tRNA formyltransferase [Bifidobacterium breve CECT 7263]
gi|291381843|gb|EFE89361.1| methionyl-tRNA formyltransferase [Bifidobacterium breve DSM 20213 =
JCM 1192]
gi|339479023|gb|ABE95484.1| Lysine decarboxylase family [Bifidobacterium breve UCC2003]
gi|376165791|gb|EHS84731.1| Methionyl-tRNA formyltransferase [Bifidobacterium breve CECT 7263]
Length = 300
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R+F RK + + + V+ PGG GTLDEMFE+L L+Q ++ + +P +
Sbjct: 202 FRYFFVRKTMFVKYS--------SGVIVCPGGFGTLDEMFELLTLVQTHKVAN---IPVV 250
Query: 77 VMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEAL 119
+ D +++ L D+L G + G ++K + L + D EA+
Sbjct: 251 LYGKD-YWQGLFDWLDGPVAERGMISKID-PKLVTVTDDADEAV 292
>gi|227832818|ref|YP_002834525.1| hypothetical protein cauri_0990 [Corynebacterium aurimucosum ATCC
700975]
gi|262182693|ref|ZP_06042114.1| hypothetical protein CaurA7_01762 [Corynebacterium aurimucosum ATCC
700975]
gi|227453834|gb|ACP32587.1| hypothetical protein cauri_0990 [Corynebacterium aurimucosum ATCC
700975]
Length = 256
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 64/123 (52%), Gaps = 13/123 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + A + LPGG+GT+DE FE++ ++Q ++ + P
Sbjct: 143 LNFRYFFARKTMFLKYS--------QAFICLPGGMGTMDEFFEVMCMVQTGKVTN---YP 191
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
++M + ++ L++++ G E L+ + D EA++++ + + S DKR
Sbjct: 192 IVLMGTE-YWSGLVEWMKKTLAEGGFISPEDLDLFLVTDDIDEAVAHILAAHKVMS-DKR 249
Query: 135 VHE 137
+ E
Sbjct: 250 LRE 252
>gi|159184601|ref|NP_354090.2| conserved hypothetical protein [Agrobacterium fabrum str. C58]
gi|159139903|gb|AAK86875.2| conserved hypothetical protein [Agrobacterium fabrum str. C58]
Length = 211
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGS 69
Q ++LV + RKH + + R+D A V LPGGVGTL+E+ EI+ QL R
Sbjct: 92 QLNELVITKDMHERKHMMFE---RSD-----AFVTLPGGVGTLEEIVEIMTWAQLGRHAK 143
Query: 70 ELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAK 102
P + N + F+ +L+ + D G + +
Sbjct: 144 ----PMVFANINGFWNPMLELVQHMRDQGFIHR 172
>gi|302553945|ref|ZP_07306287.1| lysine decarboxylase [Streptomyces viridochromogenes DSM 40736]
gi|302471563|gb|EFL34656.1| lysine decarboxylase [Streptomyces viridochromogenes DSM 40736]
Length = 252
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 20/114 (17%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A V LPGG+GTLDE+FE L L+Q +++ + P+
Sbjct: 151 LNFRYFFVRKMMFVKYA--------QGFVVLPGGLGTLDELFEALTLVQTQKV-TRFPI- 200
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVAS----LWKICDSNSEALSYLAE 124
V+ ++ L+D+L D +A+ + A L+ + D EA++ +++
Sbjct: 201 --VLFGSEYWGGLVDWLRDT----VIAQHKAAEKDLLLFHVTDDVDEAVALVSK 248
>gi|167899412|ref|ZP_02486813.1| decarboxylase family protein [Burkholderia pseudomallei 7894]
Length = 279
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 14/99 (14%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I P+P +++
Sbjct: 183 YFAIRKLHLLERA--------KAAVFFPGGYGTCDELFEVLTLLQTRKIA---PLPVVLV 231
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
+F++ +DF G D G + + A+L++ C++ E
Sbjct: 232 G-RAFWRSAVDF-GFLVDEGMIDPCD-AALFRFCETADE 267
>gi|317485387|ref|ZP_07944266.1| hypothetical protein HMPREF0179_01619 [Bilophila wadsworthia 3_1_6]
gi|316923346|gb|EFV44553.1| hypothetical protein HMPREF0179_01619 [Bilophila wadsworthia 3_1_6]
Length = 200
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 13/106 (12%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
D R+F RK + A+ A V +PGG+GT+DE+ E L Q +RI P+P
Sbjct: 99 DYRYFFLRKLMFVKYAL--------AYVVMPGGMGTIDELSEAFVLAQTKRI---RPLP- 146
Query: 76 LVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALS 120
+++ +F+ LD++ G + EV L +CD+ + +
Sbjct: 147 IILYQSTFWNGFLDWVRSTMVSGGYIRASEVDDLVTVCDTPEQVVQ 192
>gi|46199583|ref|YP_005250.1| hypothetical protein TTC1281 [Thermus thermophilus HB27]
gi|46197209|gb|AAS81623.1| conserved hypothetical protein [Thermus thermophilus HB27]
Length = 217
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 13/112 (11%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
++ + LR+F RK + AV V LPGG GTLDE+ E+L LIQ E++
Sbjct: 112 QTHALSLRYFFVRKVLFVRYAV--------GFVFLPGGFGTLDELSEVLVLIQTEKV-HR 162
Query: 71 LPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
PV L Y ++ L+ +L D V +++ L+++ D E + L
Sbjct: 163 FPVFLLDRGY---WEGLVRWLAFLRDQKAVGPEDLG-LFRLLDEPEEVVQAL 210
>gi|293604244|ref|ZP_06686652.1| methionyl-tRNA formyltransferase [Achromobacter piechaudii ATCC
43553]
gi|292817469|gb|EFF76542.1| methionyl-tRNA formyltransferase [Achromobacter piechaudii ATCC
43553]
Length = 226
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 16/127 (12%)
Query: 4 PKVLCKQESQLVDLRF--FSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILAL 61
P E Q + L F F +RK A VA+PGG GTLDE+FE L L
Sbjct: 99 PHEAHNNEYQTISLSFEYFFSRKATFF--------MHSFAYVAMPGGFGTLDELFEALTL 150
Query: 62 IQLERIGSELPVPFLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALS 120
IQ ++ P P +++ + ++ ++++LGD G + ++ L+ I D + +
Sbjct: 151 IQTGKV---PPAPIVLVGSE-YWSGMVEWLGDQVLGNGMIGAHDL-ELFIIEDDPVKVVR 205
Query: 121 YLAEFYD 127
+ EF+D
Sbjct: 206 RVVEFHD 212
>gi|167923927|ref|ZP_02511018.1| decarboxylase family protein [Burkholderia pseudomallei BCC215]
Length = 285
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 14/99 (14%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I P+P +++
Sbjct: 189 YFAIRKLHLLERA--------KAAVFFPGGYGTCDELFEVLTLLQTRKIA---PLPVVLV 237
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
+F++ +DF G D G + + A+L++ C++ E
Sbjct: 238 G-RAFWRSAVDF-GFLVDEGMIDPCD-AALFRFCETADE 273
>gi|167907742|ref|ZP_02494947.1| decarboxylase family protein [Burkholderia pseudomallei NCTC 13177]
Length = 292
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 14/99 (14%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I + LPV V+
Sbjct: 196 YFAIRKLHLLERA--------KAAVFFPGGYGTCDELFEVLTLLQTRKI-APLPV---VL 243
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
+F++ +DF G D G + + A+L++ C++ E
Sbjct: 244 VGRAFWRSAVDF-GFLVDEGMIDPCD-AALFRFCETADE 280
>gi|46201741|ref|ZP_00054438.2| COG1611: Predicted Rossmann fold nucleotide-binding protein
[Magnetospirillum magnetotacticum MS-1]
Length = 298
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDE+FE LIQ +I P+P L+ + +++++++ +
Sbjct: 215 ALVVFPGGFGTLDELFEAATLIQTGKIE---PIPILLFGRE-YWERVINIDAMISEGMVA 270
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
A+D+ ++ ++ EA + +A+FY L
Sbjct: 271 AEDK--DIFTFVETAEEAWNCIADFYRL 296
>gi|404257626|ref|ZP_10960950.1| hypothetical protein GONAM_09_00040 [Gordonia namibiensis NBRC
108229]
gi|403403699|dbj|GAB99359.1| hypothetical protein GONAM_09_00040 [Gordonia namibiensis NBRC
108229]
Length = 274
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A A V LPGG+GTLDE+FE L L+Q +++ + P
Sbjct: 158 MNFRYFFVRKTMFVKYA--------QAFVCLPGGMGTLDELFEALTLVQTKKV---VRFP 206
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
+++ D F+ LLD++ D
Sbjct: 207 IVLVGSD-FWGGLLDWMRDV 225
>gi|126457471|ref|YP_001076644.1| decarboxylase family protein [Burkholderia pseudomallei 1106a]
gi|167743790|ref|ZP_02416564.1| decarboxylase family protein [Burkholderia pseudomallei 14]
gi|167820979|ref|ZP_02452659.1| decarboxylase family protein [Burkholderia pseudomallei 91]
gi|167829331|ref|ZP_02460802.1| decarboxylase family protein [Burkholderia pseudomallei 9]
gi|167850806|ref|ZP_02476314.1| decarboxylase family protein [Burkholderia pseudomallei B7210]
gi|167916084|ref|ZP_02503175.1| decarboxylase family protein [Burkholderia pseudomallei 112]
gi|242313088|ref|ZP_04812105.1| conserved hypothetical protein TIGR00730 [Burkholderia pseudomallei
1106b]
gi|254185948|ref|ZP_04892466.1| decarboxylase family protein [Burkholderia pseudomallei Pasteur
52237]
gi|254193662|ref|ZP_04900094.1| decarboxylase family protein [Burkholderia pseudomallei S13]
gi|254263337|ref|ZP_04954202.1| decarboxylase family protein [Burkholderia pseudomallei 1710a]
gi|254301006|ref|ZP_04968450.1| decarboxylase family protein [Burkholderia pseudomallei 406e]
gi|403523853|ref|YP_006659422.1| decarboxylase family protein [Burkholderia pseudomallei BPC006]
gi|126231239|gb|ABN94652.1| conserved hypothetical protein TIGR00730 [Burkholderia pseudomallei
1106a]
gi|157810733|gb|EDO87903.1| decarboxylase family protein [Burkholderia pseudomallei 406e]
gi|157933634|gb|EDO89304.1| decarboxylase family protein [Burkholderia pseudomallei Pasteur
52237]
gi|169650413|gb|EDS83106.1| decarboxylase family protein [Burkholderia pseudomallei S13]
gi|242136327|gb|EES22730.1| conserved hypothetical protein TIGR00730 [Burkholderia pseudomallei
1106b]
gi|254214339|gb|EET03724.1| decarboxylase family protein [Burkholderia pseudomallei 1710a]
gi|403078920|gb|AFR20499.1| decarboxylase family protein [Burkholderia pseudomallei BPC006]
Length = 292
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 14/99 (14%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I + LPV V+
Sbjct: 196 YFAIRKLHLLERA--------KAAVFFPGGYGTCDELFEVLTLLQTRKI-APLPV---VL 243
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
+F++ +DF G D G + + A+L++ C++ E
Sbjct: 244 VGRAFWRSAVDF-GFLVDEGMIDPCD-AALFRFCETADE 280
>gi|409390889|ref|ZP_11242601.1| hypothetical protein GORBP_065_01650 [Gordonia rubripertincta NBRC
101908]
gi|403199266|dbj|GAB85835.1| hypothetical protein GORBP_065_01650 [Gordonia rubripertincta NBRC
101908]
Length = 277
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A A V LPGG+GTLDE+FE L L+Q +++ + P
Sbjct: 161 MNFRYFFVRKTMFVKYA--------QAFVCLPGGMGTLDELFEALTLVQTKKV---VRFP 209
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
+++ D F+ LLD++ D
Sbjct: 210 IVLVGSD-FWGGLLDWMRDV 228
>gi|395782230|ref|ZP_10462634.1| TIGR00730 family protein [Bartonella rattimassiliensis 15908]
gi|395419169|gb|EJF85470.1| TIGR00730 family protein [Bartonella rattimassiliensis 15908]
Length = 285
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE+FE L L+Q R+ VP L+ + F+ ++F GT+
Sbjct: 203 ALAIFPGGFGTLDELFETLTLVQTGRMQQ---VPILLFGRE-FWSNTINF-EYLSAQGTI 257
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ +V + K ++ +EA + FY L
Sbjct: 258 SPTDV-NFMKFVNTAAEAFEEIRSFYKL 284
>gi|424909949|ref|ZP_18333326.1| TIGR00730 family protein [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392845980|gb|EJA98502.1| TIGR00730 family protein [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 206
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGS 69
Q ++LV + RKH + + R+D A V LPGGVGTL+E+ EI+ QL R
Sbjct: 87 QLNELVITKDMHERKHMMFE---RSD-----AFVTLPGGVGTLEEIVEIMTWAQLGRHAK 138
Query: 70 ELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAK 102
P + N + F+ +L+ + D G + +
Sbjct: 139 ----PMVFANINGFWNPMLELVQHMRDQGFIHR 167
>gi|345864828|ref|ZP_08817024.1| DNA processing protein A [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345877327|ref|ZP_08829078.1| hypothetical protein Rifp1Sym_as00120 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225638|gb|EGV51990.1| hypothetical protein Rifp1Sym_as00120 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|345124065|gb|EGW53949.1| DNA processing protein A [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 241
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 4 PKVLCKQESQLVDLRF--FSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILAL 61
PK Q + L+F F +RK + A +A V LPGG GTLDE+ EIL L
Sbjct: 111 PKEQSGNPYQDISLQFRHFFSRKVMFVKYA--------SAYVVLPGGFGTLDELAEILTL 162
Query: 62 IQLERIGSELPVPFLVMNYDSFYKKLLDFLGD--CEDWGTVAKDEVASLWKICDSNSEAL 119
+Q G +P ++++ F+ LLD+ CE GT+ +++ L ++C+ E +
Sbjct: 163 VQ---TGKTREIPIILVD-GQFWSGLLDWFRHSLCEA-GTIDPEDL-DLLQVCNEPQEVV 216
Query: 120 SYLAEFYDLSSIDKRVHEVNL 140
+ Y+ + E +
Sbjct: 217 DAIFSHYEHRGFEPSAAEQEM 237
>gi|237510354|ref|ZP_04523069.1| decarboxylase family protein [Burkholderia pseudomallei MSHR346]
gi|235002559|gb|EEP51983.1| decarboxylase family protein [Burkholderia pseudomallei MSHR346]
Length = 319
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 14/99 (14%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I + LPV V+
Sbjct: 223 YFAIRKLHLLERA--------KAAVFFPGGYGTCDELFEVLTLLQTRKI-APLPV---VL 270
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
+F++ +DF G D G + + A+L++ C++ E
Sbjct: 271 VGRAFWRSAVDF-GFLVDEGMIDPCD-AALFRFCETADE 307
>gi|330997183|ref|ZP_08321036.1| TIGR00730 family protein [Paraprevotella xylaniphila YIT 11841]
gi|329570978|gb|EGG52685.1| TIGR00730 family protein [Paraprevotella xylaniphila YIT 11841]
Length = 207
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 29 DCAVRNDSCDRTA--VVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKK 86
D R + R + V+ALPGG GTL+E+ EI+ QL G L P +V+N + FY
Sbjct: 101 DMHTRKQTMARLSDGVIALPGGCGTLEELLEIITWKQL---GLYLN-PIVVLNTNGFYDP 156
Query: 87 LLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVHE 137
LL L + + + +WK+ + +EA+ L Y DK + +
Sbjct: 157 LLKMLDRAAEEHFMRPAHL-DIWKVASTPTEAIDLL---YSTPVWDKEIRK 203
>gi|264677787|ref|YP_003277693.1| hypothetical protein CtCNB1_1651 [Comamonas testosteroni CNB-2]
gi|262208299|gb|ACY32397.1| conserved hypothetical protein [Comamonas testosteroni CNB-2]
Length = 197
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 22/106 (20%)
Query: 7 LCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRT------------------AVVALPGG 48
+ + +Q R L+D + N +CD A VALPGG
Sbjct: 52 VVAEATQQAGGRVVGIIPQALVDKELANQACDELHIVKNMHERKAMMAERSDAFVALPGG 111
Query: 49 VGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC 94
+GT +E+FE+ QL P ++N D +Y +L FL C
Sbjct: 112 IGTFEELFEVWTWRQL----GYHDKPIGILNVDGYYDAMLQFLQSC 153
>gi|53722943|ref|YP_111928.1| hypothetical protein BPSS1922 [Burkholderia pseudomallei K96243]
gi|76818869|ref|YP_336180.1| decarboxylase family protein [Burkholderia pseudomallei 1710b]
gi|386865738|ref|YP_006278686.1| decarboxylase family protein [Burkholderia pseudomallei 1026b]
gi|418397209|ref|ZP_12970940.1| decarboxylase family protein [Burkholderia pseudomallei 354a]
gi|418536968|ref|ZP_13102631.1| decarboxylase family protein [Burkholderia pseudomallei 1026a]
gi|418544286|ref|ZP_13109587.1| decarboxylase family protein [Burkholderia pseudomallei 1258a]
gi|418551129|ref|ZP_13116064.1| decarboxylase family protein [Burkholderia pseudomallei 1258b]
gi|418556791|ref|ZP_13121407.1| decarboxylase family protein [Burkholderia pseudomallei 354e]
gi|52213357|emb|CAH39400.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|76583342|gb|ABA52816.1| decarboxylase family protein [Burkholderia pseudomallei 1710b]
gi|385349254|gb|EIF55836.1| decarboxylase family protein [Burkholderia pseudomallei 1258b]
gi|385349894|gb|EIF56450.1| decarboxylase family protein [Burkholderia pseudomallei 1258a]
gi|385351183|gb|EIF57672.1| decarboxylase family protein [Burkholderia pseudomallei 1026a]
gi|385366331|gb|EIF71955.1| decarboxylase family protein [Burkholderia pseudomallei 354e]
gi|385369217|gb|EIF74570.1| decarboxylase family protein [Burkholderia pseudomallei 354a]
gi|385662866|gb|AFI70288.1| decarboxylase family protein [Burkholderia pseudomallei 1026b]
Length = 315
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 14/99 (14%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I + LPV V+
Sbjct: 219 YFAIRKLHLLERA--------KAAVFFPGGYGTCDELFEVLTLLQTRKI-APLPV---VL 266
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
+F++ +DF G D G + + A+L++ C++ E
Sbjct: 267 VGRAFWRSAVDF-GFLVDEGMIDPCD-AALFRFCETADE 303
>gi|394990044|ref|ZP_10382876.1| hypothetical protein SCD_02469 [Sulfuricella denitrificans skB26]
gi|393790309|dbj|GAB72515.1| hypothetical protein SCD_02469 [Sulfuricella denitrificans skB26]
Length = 233
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R F ARK + A TA V +PGG GTLDE+ E L L+Q G +P +
Sbjct: 118 FRHFFARKVMFVKFA--------TAYVVMPGGFGTLDELMEALTLVQ---TGKTRKIP-I 165
Query: 77 VMNYDSFYKKLLDFLGDC-EDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 135
++ + +++ L+D+ D GT+ D++ L +I D + + + ++Y+ +
Sbjct: 166 ILVHGPYWRGLVDWFRDTLVKEGTINADDL-DLIQIIDEPKDVVDAIFKYYETRGFEPSP 224
Query: 136 HE 137
E
Sbjct: 225 AE 226
>gi|359778440|ref|ZP_09281709.1| hypothetical protein ARGLB_085_02220 [Arthrobacter globiformis NBRC
12137]
gi|359304357|dbj|GAB15538.1| hypothetical protein ARGLB_085_02220 [Arthrobacter globiformis NBRC
12137]
Length = 234
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 59/107 (55%), Gaps = 14/107 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + A + LPGG+GTLDE+FE + L+Q +++ + P+
Sbjct: 122 INFRYFFARKTMFVKYA--------QGFIVLPGGLGTLDELFEAMVLVQTQKV-TSFPI- 171
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALS 120
V+ +F+ +++++ G G V+ ++ L ++ DS EA++
Sbjct: 172 --VLLGAAFWGPMIEWITGTLVAEGMVSAKDL-DLIQVVDSPEEAVN 215
>gi|347526506|ref|YP_004833253.1| hypothetical protein SLG_01210 [Sphingobium sp. SYK-6]
gi|345135187|dbj|BAK64796.1| hypothetical protein SLG_01210 [Sphingobium sp. SYK-6]
Length = 293
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GT DE FE+L L+Q G P+P L+ + F+ ++++F E+ G +
Sbjct: 205 ALAVFPGGFGTFDEFFELLTLVQ---TGKMKPIPILLFGRE-FWTRVVNFDALAEE-GVI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSID 132
+ ++ L ++ EA + EFY S D
Sbjct: 260 SPHDL-DLINWVETAEEAWRVVDEFYGESGAD 290
>gi|126442731|ref|YP_001063748.1| decarboxylase family protein [Burkholderia pseudomallei 668]
gi|134278776|ref|ZP_01765490.1| decarboxylase family protein [Burkholderia pseudomallei 305]
gi|167724850|ref|ZP_02408086.1| decarboxylase family protein [Burkholderia pseudomallei DM98]
gi|217422717|ref|ZP_03454220.1| conserved hypothetical protein TIGR00730 [Burkholderia pseudomallei
576]
gi|126222222|gb|ABN85727.1| decarboxylase family protein [Burkholderia pseudomallei 668]
gi|134250560|gb|EBA50640.1| decarboxylase family protein [Burkholderia pseudomallei 305]
gi|217394948|gb|EEC34967.1| conserved hypothetical protein TIGR00730 [Burkholderia pseudomallei
576]
Length = 292
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 14/99 (14%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I + LPV V+
Sbjct: 196 YFAIRKLHLLERA--------KAAVFFPGGYGTCDELFEVLTLLQTRKI-APLPV---VL 243
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
+F++ +DF G D G + + A+L++ C++ E
Sbjct: 244 VGRAFWRSAVDF-GFLVDEGMIDPCD-AALFRFCETADE 280
>gi|325287679|ref|YP_004263469.1| hypothetical protein Celly_2781 [Cellulophaga lytica DSM 7489]
gi|324323133|gb|ADY30598.1| Conserved hypothetical protein CHP00730 [Cellulophaga lytica DSM
7489]
Length = 228
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCE-DWGT 99
V +PGG GTLDE+FE + LIQ +IG + P+ ++ SF+ L+D++ + G
Sbjct: 138 GFVVMPGGFGTLDELFEAITLIQTNKIG-KFPI---ILVGTSFWTGLIDWVKETMLGEGN 193
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFY 126
++ ++ L KI D+ E + + FY
Sbjct: 194 ISASDL-DLIKIVDTADEVVEIIDAFY 219
>gi|313885486|ref|ZP_07819236.1| TIGR00730 family protein [Eremococcus coleocola ACS-139-V-Col8]
gi|312619216|gb|EFR30655.1| TIGR00730 family protein [Eremococcus coleocola ACS-139-V-Col8]
Length = 180
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
P+VL E ++L+++ S RK LI A +ALPGG GTL+E+ +
Sbjct: 64 PQVLNNSELNHTHLNKLIEVDTMSQRKEALIQAG--------QAFIALPGGPGTLEEVAD 115
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
+LA +++E + P ++ N + +Y L + L D + ++ C S +E
Sbjct: 116 VLAWLRMESGNA----PCIIYNINGYYDDLANLLKKMVDVAFIDNTSFQHVY-FCQSLTE 170
Query: 118 ALSYLAEF 125
+ LA++
Sbjct: 171 IANILAKY 178
>gi|367012982|ref|XP_003680991.1| hypothetical protein TDEL_0D01960 [Torulaspora delbrueckii]
gi|359748651|emb|CCE91780.1| hypothetical protein TDEL_0D01960 [Torulaspora delbrueckii]
Length = 228
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A VA+PGG GTL+E+ E + QL G P ++ N D FY LL+F+ D G +
Sbjct: 130 AYVAMPGGYGTLEEIMECITWSQLGIHGK----PIVLFNIDGFYDSLLNFIKHAIDEGFI 185
Query: 101 AK 102
+K
Sbjct: 186 SK 187
>gi|299531607|ref|ZP_07045012.1| hypothetical protein CTS44_12489 [Comamonas testosteroni S44]
gi|298720323|gb|EFI61275.1| hypothetical protein CTS44_12489 [Comamonas testosteroni S44]
Length = 197
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 22/106 (20%)
Query: 7 LCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRT------------------AVVALPGG 48
+ + +Q R L+D + N +CD A VALPGG
Sbjct: 52 VVAEATQQAGGRVVGIIPQALVDKELANQACDELHIVKNMHERKAMMAERSDAFVALPGG 111
Query: 49 VGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC 94
+GT +E+FE+ QL P ++N D +Y +L FL C
Sbjct: 112 IGTFEELFEVWTWRQL----GYHDKPIGILNVDGYYDAMLQFLQSC 153
>gi|256825751|ref|YP_003149711.1| hypothetical protein Ksed_19460 [Kytococcus sedentarius DSM 20547]
gi|256689144|gb|ACV06946.1| conserved hypothetical protein, DprA/Smf-related, family 2
[Kytococcus sedentarius DSM 20547]
Length = 288
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A + + LPGG GTLDE+FE L L+Q ++ + P+
Sbjct: 179 VNFRYFFVRKTMFVKYA--------SGFIVLPGGFGTLDELFEALTLVQTGKV-THFPI- 228
Query: 75 FLVMNYDSFYKKLLDFL 91
V+ F++ LLD+L
Sbjct: 229 --VLIGTDFWQPLLDWL 243
>gi|21674095|ref|NP_662160.1| hypothetical protein CT1272 [Chlorobium tepidum TLS]
gi|21647249|gb|AAM72502.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 184
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V LPGG+GTLDE+ EIL L + P +++N + F+ +LL F V
Sbjct: 101 AFVILPGGLGTLDELMEILTWKHL----GQHRKPIILLNTEGFWNQLLQFFERIAAEKMV 156
Query: 101 AKDEVASLWKICDSNSEALSYL 122
K S + IC+S S+ L+ +
Sbjct: 157 -KPGYESYYDICNSASDVLAMI 177
>gi|296119447|ref|ZP_06838005.1| methionyl-tRNA formyltransferase [Corynebacterium ammoniagenes DSM
20306]
gi|295967330|gb|EFG80597.1| methionyl-tRNA formyltransferase [Corynebacterium ammoniagenes DSM
20306]
Length = 245
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 13/125 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + A V LPGG+GT+DE+FE+L ++Q ++ + P+
Sbjct: 131 INFRYFFARKTMFLKYS--------QAFVCLPGGMGTMDELFEMLCMVQTGKV-TNYPIV 181
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKR 134
+ Y + L+D++ + + L+ + DS EA+ ++ + D+R
Sbjct: 182 LIGTEY---WSGLVDWMANTLVADGYINPQDMDLFLLTDSVDEAVEHIVAAHK-EMTDER 237
Query: 135 VHEVN 139
V +N
Sbjct: 238 VRRLN 242
>gi|222054635|ref|YP_002536997.1| hypothetical protein Geob_1537 [Geobacter daltonii FRC-32]
gi|221563924|gb|ACM19896.1| conserved hypothetical protein [Geobacter daltonii FRC-32]
Length = 342
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Query: 3 SPKVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALI 62
+P +L+ ++F RK + A A+ PGG GTLDE E+ LI
Sbjct: 143 APNPFMLANPRLITYKYFFNRKVAFVKEA--------DAIAVFPGGFGTLDEAMEVFTLI 194
Query: 63 QLERIGSELPVPF-LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSY 121
Q G P P L+ + D ++++ F+ + E S++ I S EA+
Sbjct: 195 Q---TGKTSPKPLVLIDDDDGYWEQWFIFIKERMLGRGFISAEDFSIFTITRSEKEAVKV 251
Query: 122 LAEFY 126
+ +FY
Sbjct: 252 IEDFY 256
>gi|372221127|ref|ZP_09499548.1| hypothetical protein MzeaS_02347 [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 193
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 34 NDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGD 93
N+ CD V+ALPGG GT++E+FE+L QL P ++N + FY L+ FL D
Sbjct: 95 NELCD--GVIALPGGFGTIEELFEMLTWGQL----GLHKKPIGILNINGFYDNLIAFLDD 148
>gi|218671502|ref|ZP_03521172.1| hypothetical protein RetlG_07513 [Rhizobium etli GR56]
Length = 149
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGS 69
Q ++L+ ARKH + + R+D A VALPGG+GTL+E+ EI+ QL R
Sbjct: 29 QLNELIVTPDMHARKHTMFE---RSD-----AFVALPGGIGTLEEIVEIMTWAQLGR--H 78
Query: 70 ELPVPFLVMNYDSFYKKLLDFLGDCEDWG 98
E P+ F N + F+ +++ L D G
Sbjct: 79 EKPMVF--ANINGFWDPMMELLRHMTDEG 105
>gi|332283707|ref|YP_004415618.1| hypothetical protein PT7_0454 [Pusillimonas sp. T7-7]
gi|330427660|gb|AEC18994.1| hypothetical protein PT7_0454 [Pusillimonas sp. T7-7]
Length = 208
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL 91
A +ALPGG GTLDE+FE++ L+Q ++ P P +++ + F+ L+D++
Sbjct: 112 AYIALPGGYGTLDELFEVMTLVQTRKV---PPAPIILIGTE-FWAGLIDWI 158
>gi|433457934|ref|ZP_20415898.1| hypothetical protein D477_13278 [Arthrobacter crystallopoietes
BAB-32]
gi|432194113|gb|ELK50770.1| hypothetical protein D477_13278 [Arthrobacter crystallopoietes
BAB-32]
Length = 267
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + A + LPGG+GT+DE+FE + L+Q +++ S P+
Sbjct: 155 INFRYFFARKTMFVKYA--------QGFIVLPGGLGTMDELFEAMVLVQTQKVTS-FPI- 204
Query: 75 FLVMNYDSFYKKLLDFL 91
V+ +F+ L+D++
Sbjct: 205 --VLVGSAFWGPLMDWV 219
>gi|333397625|ref|ZP_08479438.1| hypothetical protein LgelK3_03575 [Leuconostoc gelidum KCTC 3527]
gi|406599470|ref|YP_006744816.1| hypothetical protein C269_02435 [Leuconostoc gelidum JB7]
gi|406371005|gb|AFS39930.1| hypothetical protein C269_02435 [Leuconostoc gelidum JB7]
Length = 191
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 19/131 (14%)
Query: 9 KQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIG 68
+Q ++L+++ S RK ++ A A V LPGG GTL+E+ ++L+ +IG
Sbjct: 78 EQVTRLIEVDNMSERKDLMMRYA--------DAFVVLPGGFGTLEELAQVLS---WAKIG 126
Query: 69 SELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
P +++N + FY L +L + G VA+ E+ + +I D+ + L+Y+ +F L
Sbjct: 127 LH-DKPLVLLNINGFYDSLWAWLKETVTNGFVAEHELQHV-QIFDNIDDTLAYMNQFNLL 184
Query: 129 SSIDKRVHEVN 139
+HE N
Sbjct: 185 ------IHETN 189
>gi|332671389|ref|YP_004454397.1| hypothetical protein Celf_2888 [Cellulomonas fimi ATCC 484]
gi|332340427|gb|AEE47010.1| Conserved hypothetical protein CHP00730 [Cellulomonas fimi ATCC
484]
Length = 272
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 14/106 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK + + V LPGG GT DE+FE L L+Q ++ + P+
Sbjct: 148 VNFRYFFARKTMFVKYS--------EGFVVLPGGFGTFDELFEALTLVQTHKV-TSFPI- 197
Query: 75 FLVMNYDSFYKKLLDFLGDCE-DWGTVAKDEVASLWKICDSNSEAL 119
V+ S+++ LLD+L D G ++ ++ L ++ D EA+
Sbjct: 198 --VLVGRSYWQGLLDWLRSAALDRGMISAVDL-ELLQVVDDAEEAV 240
>gi|291453963|ref|ZP_06593353.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291356912|gb|EFE83814.1| conserved hypothetical protein [Streptomyces albus J1074]
Length = 215
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A V LPGG+GTLDE+FE L L+Q ++ + P+
Sbjct: 148 VNFRYFFVRKTMFVKYA--------QGFVVLPGGLGTLDELFEALTLVQTRKV-TRFPI- 197
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
V+ ++ L+D+L D
Sbjct: 198 --VLFGREYWSGLVDWLRDT 215
>gi|254381837|ref|ZP_04997200.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194340745|gb|EDX21711.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 252
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 12/110 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + + V LPGG+GTLDEMFE L L+Q ++I + P+
Sbjct: 151 LNFRYFFVRKTMFVKYS--------QGFVVLPGGLGTLDEMFEALTLVQTQKI-TRFPI- 200
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
V+ ++ L+D+L + A + L+ + D EA++ + +
Sbjct: 201 --VLFGTEYWGGLIDWLKNTVIAQGKASERDLYLFHVTDDVDEAIALVTK 248
>gi|161522931|ref|YP_001585860.1| hypothetical protein Bmul_5908 [Burkholderia multivorans ATCC
17616]
gi|189348238|ref|YP_001941434.1| Rossmann fold nucleotide-binding protein [Burkholderia multivorans
ATCC 17616]
gi|160346484|gb|ABX19568.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
gi|189338376|dbj|BAG47444.1| predicted Rossmann fold nucleotide-binding protein [Burkholderia
multivorans ATCC 17616]
Length = 342
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 58/108 (53%), Gaps = 14/108 (12%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I P+P +++
Sbjct: 229 YFAIRKLHLLERA--------KAAVFFPGGYGTFDELFEVLTLLQTRKIA---PLPVILV 277
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
++++++ +D L D G + + ++ L+ C+S + + +Y
Sbjct: 278 G-EAYWRRAVD-LAFLADEGMIDRRDL-ELFTYCESAAAIWHAIGSWY 322
>gi|359788015|ref|ZP_09290999.1| hypothetical protein MAXJ12_01686 [Mesorhizobium alhagi CCNWXJ12-2]
gi|359256220|gb|EHK59092.1| hypothetical protein MAXJ12_01686 [Mesorhizobium alhagi CCNWXJ12-2]
Length = 279
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 18/115 (15%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F+ RK + A AV PGG GT+DE FE L LIQ R+ +PV
Sbjct: 181 NFHYFAIRKMHFVMRA--------KAVAVFPGGFGTMDEFFETLTLIQTGRM-ERVPV-- 229
Query: 76 LVMNYDSFYKKL--LDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
++ +F+++ LDFL + GT+ + + D+ EA + FY+L
Sbjct: 230 -ILFGKAFWQRAIDLDFLAEQ---GTITPGD-QDIIDFVDTADEAWEIIGRFYEL 279
>gi|359798524|ref|ZP_09301095.1| lysine decarboxylase [Achromobacter arsenitoxydans SY8]
gi|359363346|gb|EHK65072.1| lysine decarboxylase [Achromobacter arsenitoxydans SY8]
Length = 220
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 14/92 (15%)
Query: 4 PKVLCKQESQLVDLRF--FSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILAL 61
P E Q + L F F RK A VA+PGG GTLDE+FE L L
Sbjct: 93 PHEAHNNEYQTISLSFEYFFPRKAAFF--------MHSFAYVAMPGGFGTLDELFEALTL 144
Query: 62 IQLERIGSELPVPFLVMNYDSFYKKLLDFLGD 93
IQ ++ P P +++ + ++ L ++LGD
Sbjct: 145 IQTGKV---PPAPIVLVGSE-YWSGLAEWLGD 172
>gi|417860499|ref|ZP_12505555.1| hypothetical protein Agau_C201919 [Agrobacterium tumefaciens F2]
gi|338823563|gb|EGP57531.1| hypothetical protein Agau_C201919 [Agrobacterium tumefaciens F2]
Length = 181
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGS 69
Q ++LV + RKH + + R+D A V LPGGVGTL+E+ EI+ QL R
Sbjct: 62 QLNELVVTKDMHERKHMMFE---RSD-----AFVTLPGGVGTLEEIVEIMTWAQLGRHAK 113
Query: 70 ELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAK 102
P + N + F+ +L+ + D G + +
Sbjct: 114 ----PMVFANINGFWNPMLELVQHMRDQGFIHR 142
>gi|334345600|ref|YP_004554152.1| hypothetical protein Sphch_1969 [Sphingobium chlorophenolicum L-1]
gi|334102222|gb|AEG49646.1| Conserved hypothetical protein CHP00730 [Sphingobium
chlorophenolicum L-1]
Length = 292
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GT DEMFE+L LIQ G P+P L+ + F+ +++DF D G +
Sbjct: 204 ALAVFPGGFGTFDEMFELLTLIQ---TGKMKPIPVLLFGRE-FWTRVVDFEA-LADEGVI 258
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
+ ++ +L ++ +A + FY
Sbjct: 259 SPSDL-NLLTWVETAEDAWEAVQRFYQ 284
>gi|254473473|ref|ZP_05086870.1| conserved hypothetical protein TIGR00730 [Pseudovibrio sp. JE062]
gi|374331012|ref|YP_005081196.1| hypothetical protein PSE_2666 [Pseudovibrio sp. FO-BEG1]
gi|211957589|gb|EEA92792.1| conserved hypothetical protein TIGR00730 [Pseudovibrio sp. JE062]
gi|359343800|gb|AEV37174.1| hypothetical protein PSE_2666 [Pseudovibrio sp. FO-BEG1]
Length = 196
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A +ALPGG+GTL+E+ E+L QL R P L++N D F+ L++ L G +
Sbjct: 103 AFIALPGGIGTLEELVEMLTWAQLGRHDK----PMLLLNLDQFWTPLVELLDHMRGLGFI 158
Query: 101 AKD 103
D
Sbjct: 159 RPD 161
>gi|172065467|ref|YP_001816179.1| hypothetical protein BamMC406_6192 [Burkholderia ambifaria MC40-6]
gi|171997709|gb|ACB68626.1| conserved hypothetical protein [Burkholderia ambifaria MC40-6]
Length = 342
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 14/108 (12%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I P+P +++
Sbjct: 229 YFAIRKLHLLERA--------KAAVFFPGGYGTFDELFEVLTLLQTRKIA---PLPVILV 277
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
++++ + +D L D G + + ++ L+ C+S +E + +Y
Sbjct: 278 G-EAYWLRAVD-LSFLADEGMIDRRDL-ELFTYCESAAEIWHAIGSWY 322
>gi|453383104|dbj|GAC82391.1| hypothetical protein GP2_002_00610 [Gordonia paraffinivorans NBRC
108238]
Length = 274
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + AV V LPGG+GTLDE+FE L L+Q +++ P+
Sbjct: 158 MNFRYFFVRKTMFVKYAV--------GFVCLPGGLGTLDELFEALTLVQTKKV-VRFPI- 207
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
V+ F+ LLD++ D
Sbjct: 208 --VLVGTEFWAGLLDWMRDV 225
>gi|154490100|ref|ZP_02030361.1| hypothetical protein PARMER_00329 [Parabacteroides merdae ATCC
43184]
gi|423346527|ref|ZP_17324215.1| TIGR00730 family protein [Parabacteroides merdae CL03T12C32]
gi|423723086|ref|ZP_17697239.1| TIGR00730 family protein [Parabacteroides merdae CL09T00C40]
gi|154089249|gb|EDN88293.1| TIGR00730 family protein [Parabacteroides merdae ATCC 43184]
gi|409219678|gb|EKN12638.1| TIGR00730 family protein [Parabacteroides merdae CL03T12C32]
gi|409241511|gb|EKN34279.1| TIGR00730 family protein [Parabacteroides merdae CL09T00C40]
Length = 199
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 19/125 (15%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
P+ + +Q+ + LV++ RK + D + AV+ALPGG GTL+E+ E
Sbjct: 72 PRFMVEQDWCHKGLTDLVEVDSMHERKQRMADLS--------DAVIALPGGCGTLEELLE 123
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
++ QL G L P +++N + ++ LL+ D + + A+LW + + +E
Sbjct: 124 VITWKQL---GLYLN-PIVILNINGYFDPLLEMFRRAVD-EHFMRPQHAALWTVASTPAE 178
Query: 118 ALSYL 122
A+ +
Sbjct: 179 AVGLI 183
>gi|443671990|ref|ZP_21137086.1| putative uncharacterized protein [Rhodococcus sp. AW25M09]
gi|443415353|emb|CCQ15424.1| putative uncharacterized protein [Rhodococcus sp. AW25M09]
Length = 262
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + + A V LPGG GTLDE+FE L L+Q ++ P
Sbjct: 162 VNFRYFFVRKTMFVKYS--------QAFVCLPGGFGTLDELFEALTLVQTAKV---TKFP 210
Query: 75 FLVMNYDSFYKKLLDFL 91
+++ D F+ LLD++
Sbjct: 211 IVLLGKD-FWSGLLDWI 226
>gi|377559944|ref|ZP_09789476.1| hypothetical protein GOOTI_115_00150 [Gordonia otitidis NBRC
100426]
gi|377522903|dbj|GAB34641.1| hypothetical protein GOOTI_115_00150 [Gordonia otitidis NBRC
100426]
Length = 281
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 14/111 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A A V LPGG GTLDE+FE L L+Q +++ P+
Sbjct: 179 MNFRYFFVRKTMFVKYA--------QAFVCLPGGFGTLDELFEALTLVQTKKV-VRFPIV 229
Query: 75 FLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
L + + L+D++ D + G ++ D++ L+ + D+ EA+ + +
Sbjct: 230 LLGRTH---WAGLIDWMRDRLLEGGMISADDL-DLFHVVDTPEEAVQIITD 276
>gi|335036583|ref|ZP_08529908.1| hypothetical protein AGRO_3916 [Agrobacterium sp. ATCC 31749]
gi|333791966|gb|EGL63338.1| hypothetical protein AGRO_3916 [Agrobacterium sp. ATCC 31749]
Length = 181
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGS 69
Q ++LV + RKH + + R+D A V LPGGVGTL+E+ EI+ QL R
Sbjct: 62 QLNELVITKDMHERKHMMFE---RSD-----AFVTLPGGVGTLEEIVEIMTWAQLGRHAK 113
Query: 70 ELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAK 102
P + N + F+ +L+ + D G + +
Sbjct: 114 ----PMVFANINGFWNPMLELVQHMRDQGFIHR 142
>gi|330817816|ref|YP_004361521.1| Predicted Rossmann fold nucleotide-binding protein [Burkholderia
gladioli BSR3]
gi|327370209|gb|AEA61565.1| Predicted Rossmann fold nucleotide-binding protein [Burkholderia
gladioli BSR3]
Length = 194
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 50/117 (42%), Gaps = 14/117 (11%)
Query: 25 HGLIDCAVRNDSCDRT--------AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
HGL + V D R A VA+PGG GTL+E FE+ QL P
Sbjct: 76 HGLTELHVVPDMHHRKKMMADLSDAFVAMPGGAGTLEEFFEVYTWAQL----GYHRKPVA 131
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
++N + FY L+ L + G +A V SL D+N E L Y + DK
Sbjct: 132 LLNVEGFYDPLVTMLRHTVEEGFMAGSYVESL--CIDANPEGLLDQLRRYQPPTRDK 186
>gi|302536704|ref|ZP_07289046.1| lysine decarboxylase [Streptomyces sp. C]
gi|302445599|gb|EFL17415.1| lysine decarboxylase [Streptomyces sp. C]
Length = 254
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 12/110 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + + V LPGG+GTLDEMFE L L+Q ++I + P+
Sbjct: 153 LNFRYFFVRKTMFVKYS--------QGFVVLPGGLGTLDEMFEALTLVQTQKI-TRFPI- 202
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
V+ ++ L+D+L + A ++ L+ + D EA++ + +
Sbjct: 203 --VLFGTEYWGGLIDWLRNTVIAQGKASEKDLYLFHVTDDVDEAIALVTK 250
>gi|194334200|ref|YP_002016060.1| hypothetical protein Paes_1392 [Prosthecochloris aestuarii DSM 271]
gi|194312018|gb|ACF46413.1| conserved hypothetical protein [Prosthecochloris aestuarii DSM 271]
Length = 177
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A + LPGG GTLDE+ E++ L P L+ N + F+ L DF + V
Sbjct: 101 AFIVLPGGFGTLDELIEVITWRHLGHHNK----PILLFNVNGFWNPLTDFFDNLASQHMV 156
Query: 101 AKDEVASLWKICDSNSEALSYL 122
D L+ IC+S E L L
Sbjct: 157 KPDH-HKLYTICNSIEEILVSL 177
>gi|219849942|ref|YP_002464375.1| hypothetical protein Cagg_3081 [Chloroflexus aggregans DSM 9485]
gi|219544201|gb|ACL25939.1| conserved hypothetical protein [Chloroflexus aggregans DSM 9485]
Length = 243
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 22/117 (18%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V R+F RK + A A V PGG GTLDE+FE L LIQ +I + P+
Sbjct: 130 VRFRYFFVRKIMFVKYA--------HAFVIFPGGFGTLDELFEALTLIQTGKI-HDFPI- 179
Query: 75 FLVMNYDSFYKKLLDF-----LGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
V+ F+K ++D+ L + GT+ + +V L ++CD + + + E Y
Sbjct: 180 --VLYGSEFWKGMIDWARTTLLAN----GTIDQADVNRL-QVCDDPQQICTLIVESY 229
>gi|114322008|ref|YP_743691.1| hypothetical protein Mlg_2861 [Alkalilimnicola ehrlichii MLHE-1]
gi|114228402|gb|ABI58201.1| conserved hypothetical protein 730 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 241
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R F +RK + A +A V LPGG GTLDE+ EIL L+Q G +P
Sbjct: 124 LNFRHFFSRKVMFVKYA--------SAYVVLPGGFGTLDELAEILTLVQ---TGKTRRIP 172
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+++ Y +++ L+D+ D E L+++ D +E + + Y+
Sbjct: 173 -IILVYKPYWQGLVDWFRDTLVAEGAINAEDMDLFQVLDEPTEVVDAIFAHYE 224
>gi|92117044|ref|YP_576773.1| hypothetical protein Nham_1491 [Nitrobacter hamburgensis X14]
gi|91799938|gb|ABE62313.1| conserved hypothetical protein 730 [Nitrobacter hamburgensis X14]
Length = 200
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 15/84 (17%)
Query: 19 FFSARKHGLI---DCAVRNDSCDRT--------AVVALPGGVGTLDEMFEILALIQLERI 67
F +AR+H L + V D +R A VALPGGVGTL+E+ E L QL R
Sbjct: 70 FLTAREHALSRVQEMIVTRDMHERKRLMFERSDAFVALPGGVGTLEELVEQLTWQQLGRH 129
Query: 68 GSELPVPFLVMNYDSFYKKLLDFL 91
P ++ N D F++ LL L
Sbjct: 130 SK----PIMLANVDGFWEPLLALL 149
>gi|389582512|dbj|GAB65250.1| lysine decarboxylase, partial [Plasmodium cynomolgi strain B]
Length = 343
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 19/120 (15%)
Query: 9 KQESQLVD------LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALI 62
K +Q VD +F RK L+ ++ A + LPGG GTLDE+ EIL L
Sbjct: 223 KGANQYVDQNLSFKFHYFFTRKFWLVYLSL--------AFIILPGGFGTLDELMEILTLK 274
Query: 63 QLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
Q ++ +P+ ++ F+ +L+F ++G ++++++ S++ + D EA +Y+
Sbjct: 275 QCKKFKRNVPI---ILFGKEFWSSILNF-KKLAEYGLISQEDLDSIF-LTDCIEEAYNYV 329
>gi|346311749|ref|ZP_08853750.1| hypothetical protein HMPREF9452_01619 [Collinsella tanakaei YIT
12063]
gi|345900049|gb|EGX69879.1| hypothetical protein HMPREF9452_01619 [Collinsella tanakaei YIT
12063]
Length = 273
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 14/105 (13%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R+F RK + + + + PGG GTLDEMFE+L L+Q ++ E PV +
Sbjct: 174 FRYFFVRKTMFVKYS--------SGAMVFPGGFGTLDEMFELLTLVQTHKV-KETPVALV 224
Query: 77 VMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALS 120
+Y ++ L D++ G D G + + + + KI D EA++
Sbjct: 225 GEDY---WRGLFDWIEGTVRDAGMIGELD-HRMVKITDDVDEAVA 265
>gi|255038618|ref|YP_003089239.1| hypothetical protein Dfer_4873 [Dyadobacter fermentans DSM 18053]
gi|254951374|gb|ACT96074.1| conserved hypothetical protein [Dyadobacter fermentans DSM 18053]
Length = 244
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 2 LSPKVLCKQESQL-------VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDE 54
L+ K+ +Q S L ++ FF RK + + + +PGG GTLDE
Sbjct: 116 LNIKLPFEQHSNLYIDHDKSINFDFFFVRKVMFVKYS--------QGFIVMPGGFGTLDE 167
Query: 55 MFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDS 114
+FE + LIQ ++IG P+ V+ +++ LLD++ E L I D+
Sbjct: 168 LFEAMTLIQTKKIG-RFPI---VLVGSTYWSGLLDWIKGTMLTEHNINPEDLKLISIVDT 223
Query: 115 NSEALSYLAEFY 126
EA+ + FY
Sbjct: 224 PDEAVKVIDTFY 235
>gi|239990528|ref|ZP_04711192.1| hypothetical protein SrosN1_24688 [Streptomyces roseosporus NRRL
11379]
gi|291447544|ref|ZP_06586934.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291350491|gb|EFE77395.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 261
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A V LPGG+GTLDE+FE L L+Q ++ + P+
Sbjct: 160 VNFRYFFVRKTMFVKYA--------QGFVVLPGGLGTLDELFEALTLVQTGKV-TRFPI- 209
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
V+ +++ L+D+L D
Sbjct: 210 --VLFGTAYWGGLIDWLRDT 227
>gi|411004589|ref|ZP_11380918.1| hypothetical protein SgloC_17405 [Streptomyces globisporus C-1027]
Length = 261
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A V LPGG+GTLDE+FE L L+Q ++ + P+
Sbjct: 160 VNFRYFFVRKTMFVKYA--------QGFVVLPGGLGTLDELFEALTLVQTGKV-TRFPI- 209
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
V+ +++ L+D+L D
Sbjct: 210 --VLFGTAYWGGLIDWLRDT 227
>gi|223041111|ref|ZP_03611366.1| conserved hypothetical protein [Campylobacter rectus RM3267]
gi|222877605|gb|EEF12731.1| conserved hypothetical protein [Campylobacter rectus RM3267]
Length = 209
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 13/93 (13%)
Query: 21 SARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNY 80
SARK LI+ + A + PGG GTLDE+FEIL L Q IG++ FL+ +
Sbjct: 116 SARKFALIERS--------RAFLVFPGGFGTLDELFEILVLAQ---IGAKKAKIFLIGS- 163
Query: 81 DSFYKKLLDFLGDCEDWGTVAKDEVASLWKICD 113
F+ KL DF+ +E SL+ I D
Sbjct: 164 -EFWGKLDDFIKTTLIHEKAVSEEDLSLYTISD 195
>gi|190891098|ref|YP_001977640.1| hypothetical protein RHECIAT_CH0001483 [Rhizobium etli CIAT 652]
gi|190696377|gb|ACE90462.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 207
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGS 69
Q ++L+ ARKH + + R+D A VALPGG+GTL+E+ EI+ QL R
Sbjct: 87 QLNELIVTPDMHARKHTMFE---RSD-----AFVALPGGIGTLEEIVEIMTWAQLGR--H 136
Query: 70 ELPVPFLVMNYDSFYKKLLDFLGDCEDWG 98
E P+ F N + F+ +++ L D G
Sbjct: 137 EKPMVFA--NINGFWDPMMELLRHMTDEG 163
>gi|157375563|ref|YP_001474163.1| lysine decarboxylase family protein [Shewanella sediminis HAW-EB3]
gi|157317937|gb|ABV37035.1| lysine decarboxylase family [Shewanella sediminis HAW-EB3]
Length = 249
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + ++ V +PGG GT DE FE L L+Q +I P+P
Sbjct: 132 LNYRYFFARKVMFVKHSM--------GYVCMPGGFGTFDEFFEALTLLQTNKI---YPIP 180
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
++ D F++ LLD++ + E L + D E +S + +
Sbjct: 181 IVLYGTD-FWQGLLDWMAAQPLKHGLISPEDLELLTVTDDIEEVISIMVQ 229
>gi|124267298|ref|YP_001021302.1| hypothetical protein Mpe_A2111 [Methylibium petroleiphilum PM1]
gi|124260073|gb|ABM95067.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 195
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 19/133 (14%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
P+ L ++E S+L + RK G+ + A A +ALPGG+GT +E+FE
Sbjct: 68 PRSLMEREVGHSGLSELNVVETMHQRKQGMAEQA--------DAFLALPGGIGTFEELFE 119
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
+ QL P ++N +Y L+ F+ D G V+ D ++ +I D S
Sbjct: 120 VWTWRQL----GYHDQPIGLLNVGGYYNALVAFMQQTVDAGFVS-DGTRAMLEIGDEPSA 174
Query: 118 ALSYLAEFYDLSS 130
L LA LS
Sbjct: 175 LLDRLAAQAALSG 187
>gi|400288442|ref|ZP_10790474.1| hypothetical protein PPAM21_10237 [Psychrobacter sp. PAMC 21119]
Length = 225
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A + LPGG+GTL+E+ EI QL + P +++N + FY ++++ L + G +
Sbjct: 131 AFITLPGGLGTLEEIMEIATWRQL----YQHEKPMIILNINGFYDRMIEHLKYTTEQGFM 186
Query: 101 AKDEVASLWKICDSNSEALSYL 122
+ ++ L +C++ +EA+ L
Sbjct: 187 KQQDLERLV-VCNTIAEAIDLL 207
>gi|333921016|ref|YP_004494597.1| hypothetical protein AS9A_3356 [Amycolicicoccus subflavus DQS3-9A1]
gi|333483237|gb|AEF41797.1| hypothetical protein AS9A_3356 [Amycolicicoccus subflavus DQS3-9A1]
Length = 233
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A A V +PGG GTLDE+FE L L+Q +I + P+
Sbjct: 122 VNFRYFFVRKTMFVKYA--------QAFVCVPGGFGTLDELFEALTLVQTNKI-TRFPI- 171
Query: 75 FLVMNYDSFYKKLLDFL 91
++ SF+ L+D++
Sbjct: 172 --ILFGSSFWGGLVDWI 186
>gi|149196232|ref|ZP_01873287.1| hypothetical protein LNTAR_13782 [Lentisphaera araneosa HTCC2155]
gi|149140493|gb|EDM28891.1| hypothetical protein LNTAR_13782 [Lentisphaera araneosa HTCC2155]
Length = 273
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GT DE FEIL LIQ + +P+ V+ F+ +++F E
Sbjct: 181 AIVVFPGGFGTFDEFFEILTLIQTGKTTKTIPI---VLYGKEFWSNIVNFDYLVEAGVIC 237
Query: 101 AKDEVASLWKICDSNSEALSYL-AEFYDLSSIDKRVH 136
KD +W DS E YL AE + +R+H
Sbjct: 238 EKDLDLFIW--ADSPKEVFDYLTAEL----KLQRRLH 268
>gi|163781758|ref|ZP_02176758.1| hypothetical protein HG1285_02708 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882978|gb|EDP76482.1| hypothetical protein HG1285_02708 [Hydrogenivirga sp. 128-5-R1-1]
Length = 252
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 27/137 (19%)
Query: 4 PKVLCKQESQLVDLRF--FSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILAL 61
P+ + Q + L+F F RK LI ++ A V PGG GT DE+FE L L
Sbjct: 106 PREQHPNKYQNLSLKFDYFFVRKVMLIKYSL--------AYVIFPGGFGTFDELFEALTL 157
Query: 62 IQLERIGSELPVPFLVMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEAL- 119
IQ G P ++ F+ LL ++ D +GT+ ++++ +L + D SE +
Sbjct: 158 IQ---TGKSYRFPLILFG-SEFWNPLLRYMEDKMVGFGTIDREDI-NLMSVADDPSEVVD 212
Query: 120 ----------SYLAEFY 126
YL E+Y
Sbjct: 213 IVYERSKEKYHYLEEYY 229
>gi|430003038|emb|CCF18821.1| conserved hypothetical protein [Rhizobium sp.]
Length = 201
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGS 69
Q +L+ ARKH + + R+D A V LPGG+GTL+E+ EI+ QL R
Sbjct: 82 QLDELIVTEDMHARKHAMFE---RSD-----AFVTLPGGIGTLEEIVEIMTWAQLGR--H 131
Query: 70 ELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICD 113
E P+ F N F+ +LD + + G + + + I D
Sbjct: 132 EKPMVF--ANIGGFWNPMLDLVDHMREQGFIHRAHLVQPLVIND 173
>gi|418532607|ref|ZP_13098510.1| hypothetical protein CTATCC11996_23022 [Comamonas testosteroni ATCC
11996]
gi|371450466|gb|EHN63515.1| hypothetical protein CTATCC11996_23022 [Comamonas testosteroni ATCC
11996]
Length = 197
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 22/106 (20%)
Query: 7 LCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRT------------------AVVALPGG 48
+ + +Q R L+D + N +CD A VALPGG
Sbjct: 52 VVAEATQQAGGRVVGIIPQALVDKELANQACDELHIVKNMHERKAMMAERSDAFVALPGG 111
Query: 49 VGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC 94
+GT +E+FE+ QL P ++N D +Y +L FL C
Sbjct: 112 IGTFEELFEVWTWRQL----GYHDKPVGILNVDGYYDAMLQFLQSC 153
>gi|284033386|ref|YP_003383317.1| hypothetical protein Kfla_5508 [Kribbella flavida DSM 17836]
gi|283812679|gb|ADB34518.1| conserved hypothetical protein [Kribbella flavida DSM 17836]
Length = 288
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 20/112 (17%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A V +PGG GTLDE+FE L L Q ++ S PV
Sbjct: 149 MNFRYFFTRKTMFVKYA--------QGFVVMPGGFGTLDELFEALTLAQTRKVTS-FPV- 198
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVAS----LWKICDSNSEALSYL 122
V+ S++ L+D+L + +A ++++ ++ + D EA+SY+
Sbjct: 199 --VLFGTSYWSGLVDWLRET----MLADGKISAADLEMFTLTDDADEAVSYI 244
>gi|225851123|ref|YP_002731357.1| hypothetical protein PERMA_1590 [Persephonella marina EX-H1]
gi|225645425|gb|ACO03611.1| conserved hypothetical protein [Persephonella marina EX-H1]
Length = 221
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 16/114 (14%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK A TA V PGG GTLDE+ E L LIQ +++ P
Sbjct: 114 INFRYFFARKVMFNKYA--------TAYVLFPGGYGTLDELTETLVLIQTKKVK-----P 160
Query: 75 FLVMNYDS-FYKKLLDFLGDCE-DWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
F V+ Y S ++ L++++ D D G + ++ +L++I D + + + FY
Sbjct: 161 FPVILYGSEYWNGLVEWIKDVVLDKGFIDSEDF-NLFQISDDLDQIVDIIVSFY 213
>gi|421746989|ref|ZP_16184742.1| hypothetical protein B551_09831 [Cupriavidus necator HPC(L)]
gi|409774427|gb|EKN56050.1| hypothetical protein B551_09831 [Cupriavidus necator HPC(L)]
Length = 239
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD-FLGDCEDWGT 99
A + +PGG GTLDE+ E+L L+Q G VP +VM F+K LLD F G
Sbjct: 140 AFIVMPGGFGTLDELAEVLTLVQ---TGKSRAVP-VVMVGSRFWKGLLDWFRFTLLPMGL 195
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 135
+A+ ++ L +I D E L + ++Y+ D +
Sbjct: 196 IAEHDL-DLMQIVDEPHEVLEAVYDYYERRGGDTPI 230
>gi|344204518|ref|YP_004789661.1| hypothetical protein [Muricauda ruestringensis DSM 13258]
gi|343956440|gb|AEM72239.1| Conserved hypothetical protein CHP00730 [Muricauda ruestringensis
DSM 13258]
Length = 230
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC--EDWG 98
V +PGG GTLDE FE L LIQ +I + P +++ + F+K L+D++ + E
Sbjct: 140 GFVVMPGGFGTLDEFFEALTLIQTHKIHT---FPIILVGTE-FWKGLMDWIKNTLVEAGN 195
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFY 126
AKD L K+ D+ E + + FY
Sbjct: 196 ISAKD--LDLIKLVDTEDEVVEIIDAFY 221
>gi|372279415|ref|ZP_09515451.1| decarboxylase [Oceanicola sp. S124]
Length = 187
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 36 SCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCE 95
+CD A V +PGG GTLDE FEIL QL P L+MN ++ LL L
Sbjct: 99 NCD--AAVVMPGGAGTLDEFFEILTWRQL----GLHQKPILLMNVAGYWDPLLQMLEKIA 152
Query: 96 DWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
G + S+ ++ + EA + LA +
Sbjct: 153 AQGFAETSMLHSI-RVVEGAQEAATSLARHF 182
>gi|237747177|ref|ZP_04577657.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229378528|gb|EEO28619.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 245
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R F ARK A A V PGG GTLDEM E+L LIQ G +P
Sbjct: 128 LNFRHFFARKVAFAKYA--------DAFVLFPGGFGTLDEMSEVLTLIQ---TGKSRRIP 176
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSS 130
+++ F+K +D++ + + E L +I D + L + FY+ S
Sbjct: 177 VILVG-SKFWKGFIDWMYESLLAEGMLNREDIELMQIIDETDKVLEAIFSFYEKRS 231
>gi|408421536|ref|YP_006762950.1| hypothetical protein TOL2_C40900 [Desulfobacula toluolica Tol2]
gi|405108749|emb|CCK82246.1| conserved uncharacterized protein [Desulfobacula toluolica Tol2]
Length = 197
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Query: 43 VALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL 91
+ALPGG GT+DE+FEIL QL + + P FL N +Y KL+DF+
Sbjct: 102 IALPGGFGTMDEIFEILTWSQLNIL--QKPCGFL--NVKGYYNKLIDFI 146
>gi|290996796|ref|XP_002680968.1| predicted protein [Naegleria gruberi]
gi|284094590|gb|EFC48224.1| predicted protein [Naegleria gruberi]
Length = 174
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A +ALPGGVGTL+E+ E + QL E+ +++N + +Y L+ L E G V
Sbjct: 99 ACIALPGGVGTLEEVLESITWKQLGLFDGEI----IILNTNQYYAHLIMLLDRAEQDGFV 154
Query: 101 AKDEVASLWKICDSNSEAL 119
K + L+K+ ++ + +
Sbjct: 155 GKGDSRKLFKVAETPEQVI 173
>gi|257455916|ref|ZP_05621133.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
gi|257446662|gb|EEV21688.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
Length = 216
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 40 TAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGT 99
+A + LPGG+GTL+E+ EI QL + P +++N + FY KL++ L + G
Sbjct: 124 SAFITLPGGLGTLEEIMEIATWRQL----YQHEKPMIILNINGFYDKLVEHLQFTAEQGF 179
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYDL 128
+ +++ L +C++ ++A+ L ++
Sbjct: 180 MKPEDLQRLI-VCNTVADAIELLKPIVNM 207
>gi|300773287|ref|ZP_07083156.1| methionyl-tRNA formyltransferase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300759458|gb|EFK56285.1| methionyl-tRNA formyltransferase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 251
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
++ LPGG GTLDE+FE + LIQ +I P ++M + +++ + + + + GT+
Sbjct: 144 GIITLPGGFGTLDELFETITLIQTGKIKK---FPIVIMGLE-YHRHIQEHIAIMAEAGTI 199
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
+ D+ L D EA+ ++ + S I K
Sbjct: 200 SPDD-QELILFTDDIDEAIGHIRRHAEESRILK 231
>gi|83746275|ref|ZP_00943328.1| Lysine decarboxylase family [Ralstonia solanacearum UW551]
gi|207742709|ref|YP_002259101.1| hypothetical protein 730 [Ralstonia solanacearum IPO1609]
gi|386333013|ref|YP_006029182.1| hypothetical protein RSPO_c01346 [Ralstonia solanacearum Po82]
gi|421897848|ref|ZP_16328215.1| conserved hypothetical protein 730 [Ralstonia solanacearum MolK2]
gi|83727025|gb|EAP74150.1| Lysine decarboxylase family [Ralstonia solanacearum UW551]
gi|206589054|emb|CAQ36016.1| conserved hypothetical protein 730 [Ralstonia solanacearum MolK2]
gi|206594103|emb|CAQ61030.1| conserved hypothetical protein 730 [Ralstonia solanacearum IPO1609]
gi|334195461|gb|AEG68646.1| conserved hypothetical protein [Ralstonia solanacearum Po82]
Length = 194
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 37 CDRT-AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCE 95
DR A +A+PGG+GT +E+FE +QL G P ++N FY KL+ F+
Sbjct: 95 ADRADAFIAMPGGIGTYEELFETFTWLQLGYHGK----PIGLLNVAGFYDKLIAFIDHAV 150
Query: 96 DWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
D G + + A L + D + AL L E ++DK
Sbjct: 151 DEGFLMRHH-ADLLHVSD-DPGALIDLLERAPRDAVDK 186
>gi|319763537|ref|YP_004127474.1| hypothetical protein Alide_2856 [Alicycliphilus denitrificans BC]
gi|317118098|gb|ADV00587.1| Conserved hypothetical protein CHP00730 [Alicycliphilus
denitrificans BC]
Length = 288
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
+VA PGG GTLDE+FE+L LIQ G +P +++ D F+ + +DF D G V
Sbjct: 199 GLVAFPGGYGTLDELFEVLTLIQ---TGKMQRIPVVLVGRD-FWSRAVDF-DLLLDEGYV 253
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+ ++ L+ D E + L FY
Sbjct: 254 SPSDL-DLFTCVDKAEEIMGALERFY 278
>gi|224371634|ref|YP_002605798.1| hypothetical protein HRM2_45780 [Desulfobacterium autotrophicum
HRM2]
gi|223694351|gb|ACN17634.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 208
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 12/73 (16%)
Query: 27 LIDCAVRNDSCDRTAVVA--------LPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
L D V N +R A++A LPGG GT+DEMFEI+ QL + P FL
Sbjct: 86 LSDLRVVNTMHERKALMADLSDGFISLPGGFGTMDEMFEIITWAQLNL--HQKPCGFL-- 141
Query: 79 NYDSFYKKLLDFL 91
N + +Y KL++F+
Sbjct: 142 NVNGYYNKLIEFI 154
>gi|423711975|ref|ZP_17686280.1| TIGR00730 family protein [Bartonella washoensis Sb944nv]
gi|395412823|gb|EJF79303.1| TIGR00730 family protein [Bartonella washoensis Sb944nv]
Length = 279
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE+FE L L+Q R+ VP L+ + F+ +++F GT+
Sbjct: 197 ALAIFPGGFGTLDELFETLTLMQTGRMKK---VPILMFGKE-FWNNVVNF-DYLSAQGTI 251
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
++ ++ L D+ +EA ++ FY L
Sbjct: 252 SRSDM-DLVTFVDTAAEAFEHIRVFYKL 278
>gi|417103434|ref|ZP_11961054.1| hypothetical protein RHECNPAF_330011 [Rhizobium etli CNPAF512]
gi|327191289|gb|EGE58329.1| hypothetical protein RHECNPAF_330011 [Rhizobium etli CNPAF512]
Length = 182
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGS 69
Q ++L+ ARKH + + R+D A VALPGG+GTL+E+ EI+ QL R
Sbjct: 62 QLNELIVTPDMHARKHTMFE---RSD-----AFVALPGGIGTLEEIVEIMTWAQLGR--H 111
Query: 70 ELPVPFLVMNYDSFYKKLLDFLGDCEDWG 98
E P+ F N + F+ +++ L D G
Sbjct: 112 EKPMVFA--NINGFWDPMMELLRHMTDEG 138
>gi|326774166|ref|ZP_08233448.1| methionyl-tRNA formyltransferase [Actinomyces viscosus C505]
gi|326636305|gb|EGE37209.1| methionyl-tRNA formyltransferase [Actinomyces viscosus C505]
Length = 251
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK + + V +PGG+GTLDE+FE L L+Q ++I S P+
Sbjct: 142 VNFRYFFARKTMFVKYS--------DGFVVMPGGMGTLDELFEALTLVQTQKI-SSFPI- 191
Query: 75 FLVMNYDSFYKKLLDFL 91
V+ ++ LL++L
Sbjct: 192 --VLVDSGYWSGLLEWL 206
>gi|239918029|ref|YP_002957587.1| hypothetical protein Mlut_15410 [Micrococcus luteus NCTC 2665]
gi|281415792|ref|ZP_06247534.1| hypothetical protein MlutN2_11369 [Micrococcus luteus NCTC 2665]
gi|239839236|gb|ACS31033.1| conserved hypothetical protein, DprA/Smf-related, family 1
TIGR00725/conserved hypothetical protein,
DprA/Smf-related, family 2 TIGR00730 [Micrococcus luteus
NCTC 2665]
Length = 267
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 14/107 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
VD R+F RK + A + LPGG+GTLDE+FE L L+Q + + PV
Sbjct: 163 VDFRYFFVRKVMFLKYA--------QGFIVLPGGLGTLDELFEALTLVQTGTV-TRFPV- 212
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALS 120
V+ F+ L+D++ G + G ++ ++ L+ + D+ EA++
Sbjct: 213 --VLVDRGFWSPLVDWIRGTLVERGMISPED-PDLFHLVDTAEEAVA 256
>gi|104783102|ref|YP_609600.1| hypothetical protein PSEEN4126 [Pseudomonas entomophila L48]
gi|95112089|emb|CAK16816.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 372
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 13 QLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELP 72
+L+ FF RK + A A+V PGG GTLDE E+L LIQ + +P
Sbjct: 161 KLLPFHFFFIRKLFFVKEA--------DALVLCPGGFGTLDEALEVLTLIQTGK-SPLVP 211
Query: 73 VPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
V L SF++ LDF+G + L ++ S EA+ + +FY
Sbjct: 212 VVLLDSPGGSFWRDCLDFIGRQLEENRYILPSDLKLLRLVHSADEAVEEINQFY 265
>gi|365860428|ref|ZP_09400238.1| hypothetical protein SPW_0540 [Streptomyces sp. W007]
gi|364010158|gb|EHM31088.1| hypothetical protein SPW_0540 [Streptomyces sp. W007]
Length = 261
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A V LPGG+GTLDE+FE L L+Q ++ + P+
Sbjct: 160 VNFRYFFVRKTMFVKYA--------QGFVVLPGGLGTLDELFEALTLVQTGKV-TRFPI- 209
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
V+ +++ L+D+L D
Sbjct: 210 --VLFGTAYWGGLIDWLRDT 227
>gi|289705230|ref|ZP_06501629.1| conserved hypothetical protein TIGR00730 [Micrococcus luteus SK58]
gi|289557980|gb|EFD51272.1| conserved hypothetical protein TIGR00730 [Micrococcus luteus SK58]
Length = 267
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 14/107 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
VD R+F RK + A + LPGG+GTLDE+FE L L+Q + + PV
Sbjct: 163 VDFRYFFVRKVMFLKYA--------QGFIVLPGGLGTLDELFEALTLVQTGTV-TRFPV- 212
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALS 120
V+ F+ L+D++ G + G ++ ++ L+ + D+ EA++
Sbjct: 213 --VLVDRGFWSPLVDWIRGTLVERGMISPED-PDLFHLVDTAEEAVA 256
>gi|75675425|ref|YP_317846.1| hypothetical protein Nwi_1232 [Nitrobacter winogradskyi Nb-255]
gi|74420295|gb|ABA04494.1| Conserved hypothetical protein 730 [Nitrobacter winogradskyi
Nb-255]
Length = 201
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 15/84 (17%)
Query: 19 FFSARKHGLI---DCAVRNDSCDRT--------AVVALPGGVGTLDEMFEILALIQLERI 67
F +AR+H L + V D +R A VALPGGVGTL+E+ E L QL R
Sbjct: 70 FLTAREHALSRVQEMIVTRDMHERKRLMFERSDAFVALPGGVGTLEELVEQLTWQQLGRH 129
Query: 68 GSELPVPFLVMNYDSFYKKLLDFL 91
P ++ N D F++ LL L
Sbjct: 130 SK----PIMLANIDGFWEPLLALL 149
>gi|381191103|ref|ZP_09898615.1| hypothetical protein RLTM_09144 [Thermus sp. RL]
gi|380451192|gb|EIA38804.1| hypothetical protein RLTM_09144 [Thermus sp. RL]
Length = 217
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 13/112 (11%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
++ + LR+F RK + AV V LPGG GTLDE+ E+L LIQ E++
Sbjct: 112 QTHALSLRYFFVRKVLFVRYAV--------GFVFLPGGFGTLDELSEVLVLIQTEKVHR- 162
Query: 71 LPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
P +M+ +++ L+ +L D V +++ L+ + D E + L
Sbjct: 163 --FPVFLMD-RGYWEGLVRWLAFLRDQKAVGPEDL-QLFHLVDEPEEVVKAL 210
>gi|430822117|ref|ZP_19440697.1| TIGR00730 family protein [Enterococcus faecium E0120]
gi|430443618|gb|ELA53594.1| TIGR00730 family protein [Enterococcus faecium E0120]
Length = 182
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGT 99
A + LPGG GT+ E+FE+L + +GS+ VP +++NY FY L+ L E GT
Sbjct: 102 AFIILPGGSGTMYELFEVLTKVA---VGSKDEVPIVIVNYKGFYDDLIKQLVKLEQEGT 157
>gi|218258556|ref|ZP_03474907.1| hypothetical protein PRABACTJOHN_00562 [Parabacteroides johnsonii
DSM 18315]
gi|218225371|gb|EEC98021.1| hypothetical protein PRABACTJOHN_00562 [Parabacteroides johnsonii
DSM 18315]
Length = 220
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 21/134 (15%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
P+ + +Q+ + LV++ RK + D + AV+ALPGG GTL+E+ E
Sbjct: 93 PRFMVEQDWCHKGLTDLVEVDSMHERKQRMADLS--------DAVIALPGGCGTLEELLE 144
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
++ QL G L P +++N + ++ LL+ D + + A+LW + + +E
Sbjct: 145 VITWKQL---GLYLN-PIVILNINGYFDPLLEMFRRAVD-EHFMRPQHAALWAVASTPAE 199
Query: 118 A--LSYLAEFYDLS 129
A L Y +D S
Sbjct: 200 AVELIYSEPVWDAS 213
>gi|182436178|ref|YP_001823897.1| hypothetical protein SGR_2385 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326776804|ref|ZP_08236069.1| hypothetical protein CHP00730 [Streptomyces griseus XylebKG-1]
gi|178464694|dbj|BAG19214.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326657137|gb|EGE41983.1| hypothetical protein CHP00730 [Streptomyces griseus XylebKG-1]
Length = 261
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A V LPGG+GTLDE+FE L L+Q ++ + P+
Sbjct: 160 VNFRYFFVRKTMFVKYA--------QGFVVLPGGLGTLDELFEALTLVQTGKV-TRFPI- 209
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
V+ +++ L+D+L D
Sbjct: 210 --VLFGTAYWGGLIDWLRDT 227
>gi|238024947|ref|YP_002909179.1| decarboxylase family protein [Burkholderia glumae BGR1]
gi|237879612|gb|ACR31944.1| decarboxylase family protein [Burkholderia glumae BGR1]
Length = 255
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGD-CEDWGT 99
AVV +PGG GTLDE+ E+L LIQ ++ S L VP +++ + F++ LL + D G
Sbjct: 145 AVVVMPGGFGTLDELSEVLTLIQTKK--SRL-VPIILVGSE-FWQGLLQWFRDQLIPMGL 200
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVHE 137
+ D++ +L ++ D + L + FY+ + D E
Sbjct: 201 INPDDM-NLMQVIDDPDQVLEAVLAFYEDTGEDGSAQE 237
>gi|149174779|ref|ZP_01853404.1| hypothetical protein PM8797T_26625 [Planctomyces maris DSM 8797]
gi|148846473|gb|EDL60811.1| hypothetical protein PM8797T_26625 [Planctomyces maris DSM 8797]
Length = 356
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 4 PKVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQ 63
P + ++ +LV+L +F RK + + A+V GG GTLDE FE L L+Q
Sbjct: 145 PNYVIHKDEKLVNLNYFFTRKLLFVK--------EVHAIVCCAGGFGTLDEAFETLTLVQ 196
Query: 64 LERIGSELPVPFLVMNYD--SFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSY 121
G P+P ++++ S++K +FL + + E SL+ + D +A+
Sbjct: 197 ---TGKRDPMPIVLLDAPGGSYWKDWEEFLKNNLLKQELISKEDLSLFHVTDDLEDAVDE 253
Query: 122 LAEFY 126
+ FY
Sbjct: 254 VIGFY 258
>gi|330821222|ref|YP_004350084.1| hypothetical protein bgla_2g21380 [Burkholderia gladioli BSR3]
gi|327373217|gb|AEA64572.1| Predicted Rossmann fold nucleotide-binding protein [Burkholderia
gladioli BSR3]
Length = 226
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGD-CEDWGT 99
AVV +PGG GTLDE+ E+L LIQ ++ S L VP +++ SF++ LL + D G
Sbjct: 116 AVVVMPGGFGTLDELSEVLTLIQTKK--SRL-VPIILVG-SSFWQGLLQWFRDQLIPMGL 171
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYD 127
+ D++ +L ++ D + L + FY+
Sbjct: 172 INPDDM-NLMQVIDDPDQVLEAVLAFYE 198
>gi|325292445|ref|YP_004278309.1| hypothetical protein AGROH133_05135 [Agrobacterium sp. H13-3]
gi|418406600|ref|ZP_12979919.1| hypothetical protein AT5A_05225 [Agrobacterium tumefaciens 5A]
gi|325060298|gb|ADY63989.1| hypothetical protein AGROH133_05135 [Agrobacterium sp. H13-3]
gi|358007093|gb|EHJ99416.1| hypothetical protein AT5A_05225 [Agrobacterium tumefaciens 5A]
Length = 206
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGS 69
Q ++L+ + RKH + + R+D A V LPGGVGTL+E+ EI+ QL R
Sbjct: 87 QLNELIVTKDMHERKHMMFE---RSD-----AFVTLPGGVGTLEEIVEIMTWAQLGRHAK 138
Query: 70 ELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAK 102
P + N + F+ +L+ + D G + +
Sbjct: 139 ----PIVFANINGFWNPMLELVQHMRDQGFIHR 167
>gi|418295687|ref|ZP_12907537.1| decarboxylase family protein [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
gi|379067020|gb|EHY79763.1| decarboxylase family protein [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
Length = 363
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 15/126 (11%)
Query: 4 PKVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQ 63
P L+ FF RK I A A+V PGG GTLDE E+L LIQ
Sbjct: 154 PNPTVGGTDNLLSFHFFFVRKLFFIKEA--------DALVLCPGGFGTLDEALEVLTLIQ 205
Query: 64 LERIGSELPVPFLVMNYD--SFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALS 120
G VP ++++ S++K L F+ G E+ + ++ L ++ D+ EA
Sbjct: 206 ---TGKSPLVPVVLLDEPGGSYWKDALQFMRGQLEENRYILPSDM-RLMRLVDNADEAAK 261
Query: 121 YLAEFY 126
+A FY
Sbjct: 262 EIANFY 267
>gi|448097364|ref|XP_004198655.1| Piso0_002038 [Millerozyma farinosa CBS 7064]
gi|359380077|emb|CCE82318.1| Piso0_002038 [Millerozyma farinosa CBS 7064]
Length = 230
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC 94
A VALPGG GTL+E+ E++ QL P ++ N D FY L+ F+ D
Sbjct: 137 AFVALPGGYGTLEELMEVVTWFQLNIHNK----PIIIYNVDGFYDGLMQFIQDA 186
>gi|50409418|ref|XP_456873.1| DEHA2A12496p [Debaryomyces hansenii CBS767]
gi|49652537|emb|CAG84848.1| DEHA2A12496p [Debaryomyces hansenii CBS767]
Length = 231
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCED--WG 98
A VALPGG GTL+E+ E++ QL P +V N D FY L F+ D D +
Sbjct: 138 AFVALPGGYGTLEELMEMVTWFQLNIHNK----PIVVYNMDGFYDNFLTFIQDSIDSQFV 193
Query: 99 TVAKDEVASLWKICDSNSEAL 119
+V E+ + D EA+
Sbjct: 194 SVKNGEIMKVATTADEVVEAI 214
>gi|453364705|dbj|GAC79671.1| hypothetical protein GM1_011_01000 [Gordonia malaquae NBRC 108250]
Length = 270
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + + A V LPGG+GTLDE+FE L L+Q ++ L P
Sbjct: 168 INFRYFFVRKTMFVKYS--------QAFVCLPGGIGTLDELFEALTLVQTRKV---LRFP 216
Query: 75 FLVMNYDSFYKKLLDFL 91
+++ D F+ L+D++
Sbjct: 217 IVLVGRD-FWGPLVDWM 232
>gi|302869752|ref|YP_003838389.1| hypothetical protein Micau_5307 [Micromonospora aurantiaca ATCC
27029]
gi|315503766|ref|YP_004082653.1| hypothetical protein ML5_2985 [Micromonospora sp. L5]
gi|302572611|gb|ADL48813.1| Conserved hypothetical protein CHP00730 [Micromonospora aurantiaca
ATCC 27029]
gi|315410385|gb|ADU08502.1| Conserved hypothetical protein CHP00730 [Micromonospora sp. L5]
Length = 181
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL 91
A VALPGG+GTLDE+FE+ L P ++++ D FY+ LLD++
Sbjct: 100 AFVALPGGLGTLDELFEVWTTATLALHAK----PMVIVDVDGFYRPLLDWI 146
>gi|282889783|ref|ZP_06298322.1| hypothetical protein pah_c004o165 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338175934|ref|YP_004652744.1| lOG family protein [Parachlamydia acanthamoebae UV-7]
gi|281500357|gb|EFB42637.1| hypothetical protein pah_c004o165 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336480292|emb|CCB86890.1| lOG family protein PA4923 [Parachlamydia acanthamoebae UV-7]
Length = 223
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 14/113 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ R+F RK I A V LPGG GTLDE+FE L LIQ ++I P P
Sbjct: 115 LQFRYFFVRKVMFIRYA--------QGYVFLPGGFGTLDELFEALTLIQTQKIH---PFP 163
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
+M + +++ L+D++ D ++K ++ L I D+ E + + Y
Sbjct: 164 IYLMGKE-YWEGLMDWMRSTVTDHKCISKSDL-DLINITDNPEEVANGIERHY 214
>gi|167583896|ref|ZP_02376284.1| hypothetical protein BuboB_01082 [Burkholderia ubonensis Bu]
Length = 250
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV+ +PGG GTLDE+ E+L LIQ ++ S L VP +++ +F++ LL + D +
Sbjct: 145 AVIVMPGGFGTLDELSEVLTLIQTKK--SRL-VPIILVG-STFWQGLLQWFRDQMIPNGL 200
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYD 127
E +L ++ D + L + FY+
Sbjct: 201 INAEDMNLMQVIDDPDQVLDAVLAFYE 227
>gi|253700128|ref|YP_003021317.1| hypothetical protein GM21_1503 [Geobacter sp. M21]
gi|251774978|gb|ACT17559.1| conserved hypothetical protein [Geobacter sp. M21]
Length = 342
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Query: 5 KVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQL 64
+V+ K +L+ ++F RK + + A+ PGG GTLDE E+ LIQ
Sbjct: 146 RVMLKN-PRLITYKYFFNRKVAFVK--------ESDAIAVFPGGFGTLDEAMEVFTLIQ- 195
Query: 65 ERIGSELPVPF-LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLA 123
G P P LV + + +++ F+ + E S++ I S EA+ +
Sbjct: 196 --TGKTSPKPLVLVDDEEGYWEHFFRFIKERLLVMGFISAEDFSIFTITKSYEEAVQVIE 253
Query: 124 EFY 126
EFY
Sbjct: 254 EFY 256
>gi|87312104|ref|ZP_01094210.1| hypothetical protein DSM3645_15945 [Blastopirellula marina DSM
3645]
gi|87285200|gb|EAQ77128.1| hypothetical protein DSM3645_15945 [Blastopirellula marina DSM
3645]
Length = 358
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 13/118 (11%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
+ +LV +++F RK + CD AVV GG GTLDE FE+L L+Q G
Sbjct: 155 DEKLVHMKYFFTRKLMFVK------ECD--AVVCFAGGFGTLDEAFEVLTLLQ---TGKR 203
Query: 71 LPVPFLVMNYDS--FYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
P ++++ ++K+ +F+ D + E +++K+ DS EA+ FY
Sbjct: 204 DMCPVVLVDEPGGYYWKRFHEFILDPLLKQRLISPEDLAIYKVTDSCDEAIEETIGFY 261
>gi|218516678|ref|ZP_03513518.1| hypothetical protein Retl8_25198 [Rhizobium etli 8C-3]
Length = 182
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGS 69
Q ++L+ ARKH + + R+D A VALPGG+GTL+E+ EI+ QL R
Sbjct: 62 QLNELIVTPDMHARKHTMFE---RSD-----AFVALPGGIGTLEEIVEIMTWAQLGR--H 111
Query: 70 ELPVPFLVMNYDSFYKKLLDFLGDCEDWG 98
E P+ F N + F+ +++ L D G
Sbjct: 112 EKPMVF--ANINGFWDPMMELLRHMTDEG 138
>gi|311745333|ref|ZP_07719118.1| methionyl-tRNA formyltransferase [Algoriphagus sp. PR1]
gi|126577871|gb|EAZ82091.1| methionyl-tRNA formyltransferase [Algoriphagus sp. PR1]
Length = 244
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
V LPGG GT+DE FE L LIQ +IG P +++ D ++ LLD++ +
Sbjct: 154 GFVVLPGGFGTMDEFFEALTLIQTNKIGR---FPIVLVGKD-YWTGLLDWIKNTLLEHQY 209
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+ L+ I + +EA+ + EFY
Sbjct: 210 ISETDLDLFCIVEDATEAVKVIDEFY 235
>gi|410031470|ref|ZP_11281300.1| hypothetical protein MaAK2_19809 [Marinilabilia sp. AK2]
Length = 244
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC--EDWG 98
V LPGG GTLDE+FE L LIQ +IG P+ V+ F+ LLD++ +
Sbjct: 153 GFVVLPGGFGTLDELFEALTLIQTIKIG-RYPI---VLVGKEFWGGLLDWIKSTLLQQHA 208
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFY 126
+ +++ L+ + D +EA+ + EFY
Sbjct: 209 YINAEDL-DLFYVVDDATEAVKVIDEFY 235
>gi|404449347|ref|ZP_11014337.1| hypothetical protein A33Q_08452 [Indibacter alkaliphilus LW1]
gi|403765035|gb|EJZ25920.1| hypothetical protein A33Q_08452 [Indibacter alkaliphilus LW1]
Length = 190
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 43 VALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL 91
+A+PGG+GT +E+FEI+ L QL I P + N + +Y KL+ FL
Sbjct: 102 IAMPGGIGTFEELFEIMTLNQLAYIRK----PLALYNVNGYYDKLIAFL 146
>gi|325002593|ref|ZP_08123705.1| lysine decarboxylase [Pseudonocardia sp. P1]
Length = 256
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + A V LPGG GTLDE+FE L L+Q +++ ++ PV
Sbjct: 150 INFRYFFARKTMFVKYS--------QAFVCLPGGFGTLDELFEALVLVQTKKV-TKFPVV 200
Query: 75 FLVMNY 80
L +Y
Sbjct: 201 LLGTDY 206
>gi|119357262|ref|YP_911906.1| hypothetical protein Cpha266_1454 [Chlorobium phaeobacteroides DSM
266]
gi|119354611|gb|ABL65482.1| conserved hypothetical protein 730 [Chlorobium phaeobacteroides DSM
266]
Length = 182
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 19/123 (15%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
P+ L ++E S+L ++ RK L D A A + LPGG GTLDE+ E
Sbjct: 66 PRFLEEKEVAHYGISELHVVQTMHERKMKLTDWA--------DAFIILPGGFGTLDELME 117
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
I+ L + P +++N F+ L+ F D + K + A+ + +C++ SE
Sbjct: 118 IITWKHL----GQHQKPIILLNTAGFWNPLISFFDRIAD-DRMVKADYANYYSVCETPSE 172
Query: 118 ALS 120
L+
Sbjct: 173 VLA 175
>gi|372281623|ref|ZP_09517659.1| decarboxylase [Oceanicola sp. S124]
Length = 288
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE FE L LIQ R+ + PFL +F++ +++F E GTV
Sbjct: 189 AICVFPGGFGTLDETFEALTLIQTGRMERQ---PFLFFGR-AFWEGVINFEALVE-AGTV 243
Query: 101 AKDEVASLWKICDSNSEALSYL 122
+ +++ L+K ++ EA+ +
Sbjct: 244 SPEDM-ELFKFVETAEEAMEAI 264
>gi|307726749|ref|YP_003909962.1| hypothetical protein BC1003_4742 [Burkholderia sp. CCGE1003]
gi|307587274|gb|ADN60671.1| Conserved hypothetical protein CHP00730 [Burkholderia sp. CCGE1003]
Length = 285
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 65/117 (55%), Gaps = 18/117 (15%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I P+P +++
Sbjct: 185 YFAIRKLHLLERA--------KAAVFFPGGYGTCDELFEVLTLLQTGKIK---PLPVVLV 233
Query: 79 NYDSFYKKLLD--FLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDK 133
+ F+++ +D FL D G +A+ + A+L+ + ++ + + ++Y+ +S K
Sbjct: 234 G-ERFWRQAVDVQFL---IDEGMIAESD-AALFCVAETAPQIWRLVTQWYERASSQK 285
>gi|452952069|gb|EME57504.1| lysine decarboxylase [Amycolatopsis decaplanina DSM 44594]
Length = 261
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK I + A + LPGG GTLDE+FE L L+Q +++ ++ PV
Sbjct: 155 VNFRYFFARKTMFIKYS--------QAFICLPGGFGTLDELFEALTLVQTKKV-TKFPV- 204
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
V+ ++ L D++ G G + + ++ L + D +A+ + E Y
Sbjct: 205 --VLFGSDYWGGLYDWIAGSLLGEGKIGQKDL-ELLHVTDDIEDAVRVVQESY 254
>gi|255322030|ref|ZP_05363180.1| conserved hypothetical protein [Campylobacter showae RM3277]
gi|255301134|gb|EET80401.1| conserved hypothetical protein [Campylobacter showae RM3277]
Length = 184
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 21 SARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNY 80
SARK LI+ + +A + PGG GTLDE+FEIL L Q IG++ FL+
Sbjct: 91 SARKFALIERS--------SAFLVFPGGFGTLDELFEILVLAQ---IGAKKAKIFLIGR- 138
Query: 81 DSFYKKLLDFLGDCEDWGTVAKDEVASLWKICD 113
F+ KL DF+ E SL+ I D
Sbjct: 139 -EFWSKLDDFIKTTLIREKAVSKEDLSLYTISD 170
>gi|416964439|ref|ZP_11936579.1| hypothetical protein B1M_31567 [Burkholderia sp. TJI49]
gi|325521683|gb|EGD00446.1| hypothetical protein B1M_31567 [Burkholderia sp. TJI49]
Length = 252
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV+ +PGG GTLDE+ E+L LIQ ++ S L VP +++ D F+K LL + D +
Sbjct: 145 AVIVMPGGFGTLDELSEVLTLIQTKK--SRL-VPIILVGSD-FWKGLLQWFRDQLIPMGL 200
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
E L ++ D + L + FY
Sbjct: 201 INPEDMDLMQVIDDPDQVLDAVLAFY 226
>gi|296283332|ref|ZP_06861330.1| decarboxylase family protein [Citromicrobium bathyomarinum JL354]
Length = 282
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
P + ++E +QL+ + RK D A + LPGG+GT+DE+FE
Sbjct: 154 PHAMVEREFANHDCTQLITVDTMHQRKQHFTDLA--------DGFITLPGGMGTMDELFE 205
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
L+ Q+ E PV L N FY L+ F+ D G V + + ++ DS E
Sbjct: 206 ALSWAQIGY--HENPVGLL--NAFGFYDDLVQFVNRMADTGFV-RATHREILQVADSLPE 260
Query: 118 ALSYLAEF 125
L LA +
Sbjct: 261 LLDKLASY 268
>gi|253575592|ref|ZP_04852928.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844930|gb|EES72942.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
Length = 194
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 12 SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSEL 71
+Q +++ ARK + + A +ALPGG GTL+E+FE+L +Q IG
Sbjct: 79 TQFIEVEGMHARKAKMSELA--------DGFIALPGGFGTLEELFEVLCWLQ---IGIHQ 127
Query: 72 PVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSI 131
P V+N +++ L++ + C G V A L + + E LS + F + +
Sbjct: 128 K-PVGVLNVQGYFEPLMELVNSCIRAGFVHPGHEA-LINLAEEPGELLSRMENFVPVIAE 185
Query: 132 DK 133
K
Sbjct: 186 KK 187
>gi|452748550|ref|ZP_21948328.1| decarboxylase family protein [Pseudomonas stutzeri NF13]
gi|452007456|gb|EMD99710.1| decarboxylase family protein [Pseudomonas stutzeri NF13]
Length = 363
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 13/125 (10%)
Query: 4 PKVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQ 63
P L+ FF RK I A A+V PGG GTLDE E+L LIQ
Sbjct: 154 PNPTVGGTENLLSFHFFFVRKLFFIKEA--------DALVLCPGGFGTLDEALEVLTLIQ 205
Query: 64 LERIGSELPVPFLVMNYD--SFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSY 121
G VP ++++ +++K L F+ D + L ++ D EA
Sbjct: 206 ---TGKSPLVPIVLLDEPGGTYWKDALQFMRDQLEENRYILPSDMRLMRLVDDAEEAARE 262
Query: 122 LAEFY 126
+A FY
Sbjct: 263 IANFY 267
>gi|395791608|ref|ZP_10471064.1| TIGR00730 family protein [Bartonella alsatica IBS 382]
gi|395407911|gb|EJF74531.1| TIGR00730 family protein [Bartonella alsatica IBS 382]
Length = 287
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+ PGG GTLDE+FE L L+Q R+ VP L+ + F+ +++F GT+
Sbjct: 205 ALAIFPGGFGTLDELFETLTLMQTGRMKK---VPVLMFGKE-FWNNVVNF-DYLSAQGTI 259
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ +V L D+ +EA + FY L
Sbjct: 260 SPSDV-DLVTFVDTAAEAFEQIRSFYKL 286
>gi|313204646|ref|YP_004043303.1| hypothetical protein Palpr_2182 [Paludibacter propionicigenes WB4]
gi|312443962|gb|ADQ80318.1| Conserved hypothetical protein CHP00730 [Paludibacter
propionicigenes WB4]
Length = 192
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 19/122 (15%)
Query: 4 PKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFE 57
P+ +C+ E ++L+ + RK + A+ D AVVALPGG GTL+E+ E
Sbjct: 65 PRFMCEVEWNHTNLTELILVETMHERKEKM---ALMAD-----AVVALPGGCGTLEELLE 116
Query: 58 ILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
+ I +R+G P +++N + ++ L+ L D +DE +W++ ++ E
Sbjct: 117 V---ITWKRLGI-FTKPIVIVNLEGYFDALITMLDRAVD-EHFMRDEHRRMWEVVETPEE 171
Query: 118 AL 119
L
Sbjct: 172 VL 173
>gi|83716305|ref|YP_438654.1| decarboxylase [Burkholderia thailandensis E264]
gi|257141724|ref|ZP_05589986.1| decarboxylase family protein [Burkholderia thailandensis E264]
gi|83650130|gb|ABC34194.1| decarboxylase family protein [Burkholderia thailandensis E264]
Length = 318
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 14/99 (14%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I + LPV V+
Sbjct: 222 YFAIRKLHLLERA--------KAAVFFPGGYGTCDELFEVLTLLQTRKI-APLPV---VL 269
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
+F++ +DF G D G + ++ L++ C++ E
Sbjct: 270 VGRAFWRSAVDF-GFFVDEGMIDPHDM-ELFRFCETADE 306
>gi|384099322|ref|ZP_10000408.1| hypothetical protein W5A_11571 [Imtechella halotolerans K1]
gi|383832670|gb|EID72140.1| hypothetical protein W5A_11571 [Imtechella halotolerans K1]
Length = 229
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC--EDWG 98
V +PGG GTLDE+FE + LIQ +I P +++ D F+ L D++ E +
Sbjct: 138 GFVVMPGGFGTLDELFEAITLIQTNKIAK---FPIILVGKD-FWGGLFDWIKATLLEKYH 193
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFY 126
V+ ++ L KI D+ E + L FY
Sbjct: 194 NVSPGDL-DLIKIVDTEEEVIDVLDSFY 220
>gi|320532975|ref|ZP_08033727.1| conserved hypothetical protein TIGR00730 [Actinomyces sp. oral
taxon 171 str. F0337]
gi|320134805|gb|EFW27001.1| conserved hypothetical protein TIGR00730 [Actinomyces sp. oral
taxon 171 str. F0337]
Length = 251
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK + + V +PGG+GTLDE+FE L L+Q ++I S P+
Sbjct: 142 VNFRYFFARKTMFVKYS--------DGFVVMPGGMGTLDELFEALTLVQTQKI-SSFPI- 191
Query: 75 FLVMNYDSFYKKLLDFL 91
V+ ++ LL++L
Sbjct: 192 --VLVDSGYWGGLLEWL 206
>gi|402486335|ref|ZP_10833167.1| lysine decarboxylase [Rhizobium sp. CCGE 510]
gi|401814991|gb|EJT07321.1| lysine decarboxylase [Rhizobium sp. CCGE 510]
Length = 207
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGS 69
Q ++L+ ARKH + + R+D A VALPGG+GTL+E+ EI+ QL R
Sbjct: 87 QLNELIVTPDMHARKHTMFE---RSD-----AFVALPGGIGTLEEIVEIMTWAQLGR--H 136
Query: 70 ELPVPFLVMNYDSFYKKLLDFLGDCEDWG 98
E P+ F N + F+ +++ + D G
Sbjct: 137 EKPMVFA--NVNGFWDPMMELMRHMTDEG 163
>gi|397669916|ref|YP_006511451.1| hypothetical protein HMPREF9154_1175 [Propionibacterium propionicum
F0230a]
gi|395141977|gb|AFN46084.1| TIGR00730 family protein [Propionibacterium propionicum F0230a]
Length = 240
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + +A+PGG GTLDE+FE L LIQ ++ + PV
Sbjct: 139 INFRYFFARKTMFLKYS--------RGFIAMPGGFGTLDELFESLTLIQTGKV-THFPV- 188
Query: 75 FLVMNYDSFYKKLLDFL 91
V+ F+ LLD++
Sbjct: 189 --VLFGSRFWGPLLDWI 203
>gi|295836676|ref|ZP_06823609.1| decarboxylase [Streptomyces sp. SPB74]
gi|333024614|ref|ZP_08452678.1| putative decarboxylase [Streptomyces sp. Tu6071]
gi|197699709|gb|EDY46642.1| decarboxylase [Streptomyces sp. SPB74]
gi|332744466|gb|EGJ74907.1| putative decarboxylase [Streptomyces sp. Tu6071]
Length = 249
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A V LPGG GTLDE+FE L L+Q +++ + P+
Sbjct: 148 VNFRYFFVRKVMFVKYA--------RGFVVLPGGFGTLDELFEALTLVQTQKV-TRFPI- 197
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
V+ +++ L+D+L D
Sbjct: 198 --VLFGTAYWGGLVDWLRDT 215
>gi|113867046|ref|YP_725535.1| Rossmann fold nucleotide-binding protein / lysine decarboxylase
family protein [Ralstonia eutropha H16]
gi|113525822|emb|CAJ92167.1| Predicted Rossmann fold nucleotide-binding protein / Lysine
decarboxylase family protein [Ralstonia eutropha H16]
Length = 197
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 37 CDRT-AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCE 95
DR A +A+PGGVGT +E+FE +QL + PV L N + FY LL FL
Sbjct: 95 ADRADAFIAMPGGVGTFEELFETFTWLQLGY--HDKPVGLL--NVNGFYDGLLGFLAHAV 150
Query: 96 DWGTVAKDEVASLWKICDSNSEALSYLAEF 125
G + K A L + D+ + L L +
Sbjct: 151 REGFM-KQVHADLLHVADTPAGLLGQLGQL 179
>gi|407776874|ref|ZP_11124146.1| hypothetical protein NA2_02859 [Nitratireductor pacificus pht-3B]
gi|407301570|gb|EKF20690.1| hypothetical protein NA2_02859 [Nitratireductor pacificus pht-3B]
Length = 279
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GT+DE+FE L LIQ R+ VP ++ + F++ +D L + GT+
Sbjct: 198 AVAVFPGGFGTMDELFESLTLIQTGRMER---VPVILFGKE-FWEHAID-LPYLAEQGTI 252
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
+ + L D+ EA + +A FY+L
Sbjct: 253 SPGD-DQLITFVDTAEEAWAKIAAFYEL 279
>gi|329962754|ref|ZP_08300677.1| TIGR00730 family protein [Bacteroides fluxus YIT 12057]
gi|328529588|gb|EGF56491.1| TIGR00730 family protein [Bacteroides fluxus YIT 12057]
Length = 195
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV+ALPGG GTL+E+ E++ QL G L P +++N ++ LLD L D
Sbjct: 103 AVIALPGGCGTLEELLEVITWKQL---GLYLN-PVVILNTKGYFDPLLDMLHRAVD-ENF 157
Query: 101 AKDEVASLWKICDSNSEA--LSYLAEFYDLS 129
+ + ++W + + EA L + +D S
Sbjct: 158 MRQQHGAIWHVARTPQEAVELIHTTPLWDAS 188
>gi|56966780|pdb|1WEK|A Chain A, Crystal Structure Of The Conserved Hypothetical Protein
Tt1465 From Thermus Thermophilus Hb8
gi|56966781|pdb|1WEK|B Chain B, Crystal Structure Of The Conserved Hypothetical Protein
Tt1465 From Thermus Thermophilus Hb8
gi|56966782|pdb|1WEK|C Chain C, Crystal Structure Of The Conserved Hypothetical Protein
Tt1465 From Thermus Thermophilus Hb8
gi|56966783|pdb|1WEK|D Chain D, Crystal Structure Of The Conserved Hypothetical Protein
Tt1465 From Thermus Thermophilus Hb8
gi|56966784|pdb|1WEK|E Chain E, Crystal Structure Of The Conserved Hypothetical Protein
Tt1465 From Thermus Thermophilus Hb8
gi|56966785|pdb|1WEK|F Chain F, Crystal Structure Of The Conserved Hypothetical Protein
Tt1465 From Thermus Thermophilus Hb8
Length = 217
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 13/112 (11%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
++ + LR+F RK + AV V LPGG GTLDE+ E+L L+Q E++
Sbjct: 112 QTHALSLRYFFVRKVLFVRYAV--------GFVFLPGGFGTLDELSEVLVLLQTEKV-HR 162
Query: 71 LPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
PV L Y ++ L+ +L D V +++ L+++ D E + L
Sbjct: 163 FPVFLLDRGY---WEGLVRWLAFLRDQKAVGPEDL-QLFRLTDEPEEVVQAL 210
>gi|418939488|ref|ZP_13492885.1| Conserved hypothetical protein CHP00730 [Rhizobium sp. PDO1-076]
gi|375053826|gb|EHS50224.1| Conserved hypothetical protein CHP00730 [Rhizobium sp. PDO1-076]
Length = 181
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 12/82 (14%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGS 69
Q S+L+ + RKH + + R+D A V LPGG+GTL+E+ EI+ QL R
Sbjct: 62 QLSELIITQDMHERKHAMFE---RSD-----AFVTLPGGIGTLEEIVEIMTWGQLGRHAK 113
Query: 70 ELPVPFLVMNYDSFYKKLLDFL 91
P + N + F+K +L+ +
Sbjct: 114 ----PMVFANVNDFWKPMLELI 131
>gi|167615158|ref|ZP_02383793.1| decarboxylase family protein [Burkholderia thailandensis Bt4]
Length = 294
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 14/99 (14%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I + LPV V+
Sbjct: 198 YFAIRKLHLLERA--------KAAVFFPGGYGTCDELFEVLTLLQTRKI-APLPV---VL 245
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
+F++ +DF G D G + ++ L++ C++ E
Sbjct: 246 VGRAFWRSAVDF-GFFVDEGMIDPHDM-ELFRFCETADE 282
>gi|325068245|ref|ZP_08126918.1| hypothetical protein AoriK_10501 [Actinomyces oris K20]
Length = 251
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK + + V +PGG+GTLDE+FE L L+Q ++I S P+
Sbjct: 142 VNFRYFFARKTMFVKYS--------DGFVVMPGGMGTLDELFEALTLVQTQKI-SSFPI- 191
Query: 75 FLVMNYDSFYKKLLDFL 91
V+ ++ LL++L
Sbjct: 192 --VLVDSGYWGGLLEWL 206
>gi|260436149|ref|ZP_05790119.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
gi|260414023|gb|EEX07319.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
Length = 235
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL 91
A VA+PGG+GTLDE+FE L QL R ++ P ++N D ++ LL FL
Sbjct: 155 AAVAMPGGLGTLDELFEALTWAQL-RFHAK---PIGMLNLDGYFDALLSFL 201
>gi|260753769|ref|YP_003226662.1| hypothetical protein Za10_1540 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258553132|gb|ACV76078.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 292
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A PGG GTLDE+FE+L LI R+ + VP L D F+ K+++F E+
Sbjct: 200 AFAIFPGGFGTLDEVFELLTLIHTHRLEA---VPILFYGRD-FWNKIINFDALVEEGMIS 255
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
A+D ++ D+ E + + +F+
Sbjct: 256 AED--LRFFQFVDTAEEGWAVICDFW 279
>gi|400754688|ref|YP_006563056.1| hypothetical protein PGA2_c18150 [Phaeobacter gallaeciensis 2.10]
gi|398653841|gb|AFO87811.1| hypothetical protein PGA2_c18150 [Phaeobacter gallaeciensis 2.10]
Length = 180
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKL 87
AVV LPGG G+LDE+FE L QLE G P L++N D ++ L
Sbjct: 102 AVVVLPGGAGSLDELFEALTWRQLELHGK----PILILNIDGYWDPL 144
>gi|55981613|ref|YP_144910.1| hypothetical protein TTHA1644 [Thermus thermophilus HB8]
gi|55773026|dbj|BAD71467.1| conserved hypothetical protein [Thermus thermophilus HB8]
Length = 217
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 13/112 (11%)
Query: 11 ESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSE 70
++ + LR+F RK + AV V LPGG GTLDE+ E+L L+Q E++
Sbjct: 112 QTHALSLRYFFVRKVLFVRYAV--------GFVFLPGGFGTLDELSEVLVLLQTEKV-HR 162
Query: 71 LPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYL 122
PV L Y ++ L+ +L D V +++ L+++ D E + L
Sbjct: 163 FPVFLLDRGY---WEGLVRWLAFLRDQKAVGPEDL-QLFRLTDEPEEVVQAL 210
>gi|294675799|ref|YP_003576414.1| hypothetical protein RCAP_rcc00242 [Rhodobacter capsulatus SB 1003]
gi|294474619|gb|ADE84007.1| conserved hypothetical protein 730 [Rhodobacter capsulatus SB 1003]
Length = 276
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 10/84 (11%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLL--DFLGDCEDWG 98
AV PGG GTLDEMFE L LIQ R+ +P ++ + F+++++ D+L + G
Sbjct: 191 AVCVFPGGFGTLDEMFETLTLIQTRRMKR---IPLILFGAE-FWRRVVDWDYLAEA---G 243
Query: 99 TVAKDEVASLWKICDSNSEALSYL 122
T+A +++ L ++ EA+ +
Sbjct: 244 TIAAEDI-RLISFVETAEEAVEVI 266
>gi|295676013|ref|YP_003604537.1| hypothetical protein BC1002_0931 [Burkholderia sp. CCGE1002]
gi|295435856|gb|ADG15026.1| conserved hypothetical protein [Burkholderia sp. CCGE1002]
Length = 195
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A VA+PGG GTL+E+FE+ QL G P ++N SFY+ L+ L D G +
Sbjct: 100 AFVAMPGGAGTLEELFEVFTWAQLGYHGK----PVALLNTGSFYEPLIGLLQHTVDEGFL 155
Query: 101 AK 102
K
Sbjct: 156 RK 157
>gi|224370417|ref|YP_002604581.1| multidomain fusion protein (N:DNA-binding domain/C:signal
transduction histidine kinase) [Desulfobacterium
autotrophicum HRM2]
gi|223693134|gb|ACN16417.1| multidomain fusion protein (N:DNA-binding domain/C:signal
transduction histidine kinase) [Desulfobacterium
autotrophicum HRM2]
Length = 772
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPV-PFLVMNYDSFYKKLLDFLGDCEDWG 98
A +ALPGG+GTL+E+FE+L+L L EL + P ++N + ++ +L FL D G
Sbjct: 100 AFIALPGGIGTLEELFEVLSLNAL-----ELNIKPCALLNINHYWDRLTGFLNHAMDQG 153
>gi|150003838|ref|YP_001298582.1| lysine decarboxylase [Bacteroides vulgatus ATCC 8482]
gi|149932262|gb|ABR38960.1| lysine decarboxylase [Bacteroides vulgatus ATCC 8482]
Length = 177
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 22 ARKHGLIDCAVRNDS-CDRT--------AVVALPGGVGTLDEMFEILALIQLERIGSELP 72
R L+D R D+ DR V+ALPGGVGTLDE+F ++A L+ ++
Sbjct: 72 GRASDLVDVTFRTDNLSDRKDVMLNESDVVIALPGGVGTLDEVFHVMAAATLDYHRKKV- 130
Query: 73 VPFLVMNYDSFYKKLLDFLGDCE 95
+ N + F+ ++DFL E
Sbjct: 131 ---IFYNINGFWNGIIDFLAGLE 150
>gi|424891022|ref|ZP_18314621.1| TIGR00730 family protein [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393173240|gb|EJC73285.1| TIGR00730 family protein [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 207
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGS 69
Q ++L+ ARKH + + R+D A VALPGG+GTL+E+ EI+ QL R
Sbjct: 87 QLNELIVTPDMHARKHTMFE---RSD-----AFVALPGGIGTLEEIVEIMTWAQLGR--H 136
Query: 70 ELPVPFLVMNYDSFYKKLLDFLGDCEDWG 98
E P+ F N + F+ +++ + D G
Sbjct: 137 EKPMVFA--NINGFWDPMMELMRHMTDEG 163
>gi|345001891|ref|YP_004804745.1| hypothetical protein SACTE_4371 [Streptomyces sp. SirexAA-E]
gi|344317517|gb|AEN12205.1| conserved hypothetical protein [Streptomyces sp. SirexAA-E]
Length = 261
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 12/80 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A V LPGG+GTLDE+FE L L+Q ++ + P+
Sbjct: 160 VNFRYFFVRKTMFVKYA--------QGFVVLPGGLGTLDELFEALTLVQTGKV-TRFPI- 209
Query: 75 FLVMNYDSFYKKLLDFLGDC 94
V+ +++ L+D+L D
Sbjct: 210 --VLFGSAYWGGLVDWLRDT 227
>gi|423230471|ref|ZP_17216875.1| TIGR00730 family protein [Bacteroides dorei CL02T00C15]
gi|423240884|ref|ZP_17221998.1| TIGR00730 family protein [Bacteroides dorei CL03T12C01]
gi|423244180|ref|ZP_17225255.1| TIGR00730 family protein [Bacteroides dorei CL02T12C06]
gi|423313023|ref|ZP_17290959.1| TIGR00730 family protein [Bacteroides vulgatus CL09T03C04]
gi|392630836|gb|EIY24818.1| TIGR00730 family protein [Bacteroides dorei CL02T00C15]
gi|392642734|gb|EIY36497.1| TIGR00730 family protein [Bacteroides dorei CL02T12C06]
gi|392643846|gb|EIY37595.1| TIGR00730 family protein [Bacteroides dorei CL03T12C01]
gi|392686237|gb|EIY79543.1| TIGR00730 family protein [Bacteroides vulgatus CL09T03C04]
Length = 178
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 22 ARKHGLIDCAVRNDS-CDRT--------AVVALPGGVGTLDEMFEILALIQLERIGSELP 72
R L+D R D+ DR V+ALPGGVGTLDE+F ++A L+ ++
Sbjct: 73 GRASDLVDVTFRTDNLSDRKDVMLNESDVVIALPGGVGTLDEVFHVMAAATLDYHRKKV- 131
Query: 73 VPFLVMNYDSFYKKLLDFLGDCE 95
+ N + F+ ++DFL E
Sbjct: 132 ---IFYNINGFWNGIIDFLAGLE 151
>gi|377813368|ref|YP_005042617.1| hypothetical protein BYI23_B011230 [Burkholderia sp. YI23]
gi|357938172|gb|AET91730.1| hypothetical protein BYI23_B011230 [Burkholderia sp. YI23]
Length = 249
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 4 PKVLCKQESQLVDLRF--FSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILAL 61
P + Q + LRF F RK + + AVV +PGG GTLDE+ E+L L
Sbjct: 114 PHEQSGNQWQDISLRFRHFFTRKVTFVK--------NSDAVVVMPGGFGTLDELAEVLTL 165
Query: 62 IQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSY 121
IQ ++ VP +++ D F+ LLD+ + V + L ++ D + L
Sbjct: 166 IQTKK---SRHVPIVLVGAD-FWAGLLDWFKNTLLTNGVISPKDLDLMQVIDDPDQVLDA 221
Query: 122 LAEFYD 127
+ FY+
Sbjct: 222 VLRFYE 227
>gi|285018447|ref|YP_003376158.1| hypothetical protein XALc_1671 [Xanthomonas albilineans GPE PC73]
gi|283473665|emb|CBA16168.1| hypothetical protein XALC_1671 [Xanthomonas albilineans GPE PC73]
Length = 188
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 43 VALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAK 102
VALPGG GT++E+FE+L QL RIG + P FL M ++FY L+ + + G +
Sbjct: 102 VALPGGFGTMEEIFEMLTWRQL-RIGHK-PCAFLDM--ENFYAPLIGMIDRMVEEGFLHP 157
Query: 103 DEVASLWKICD 113
D+ A W D
Sbjct: 158 DQRADFWYGSD 168
>gi|305667001|ref|YP_003863288.1| hypothetical protein FB2170_12136 [Maribacter sp. HTCC2170]
gi|88709236|gb|EAR01470.1| hypothetical protein FB2170_12136 [Maribacter sp. HTCC2170]
Length = 228
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCE-DWGT 99
V +PGG GTLDE+FE + LIQ +I + P+ ++ F+ L+D++ D G
Sbjct: 138 GFVVMPGGFGTLDELFEAITLIQTNKI-EKFPI---ILVGSRFWAGLIDWVKDIMLKEGN 193
Query: 100 VAKDEVASLWKICDSNSEALSYLAEFYDLSSI 131
++ +++ L K+ D+ E + L FY S+
Sbjct: 194 ISPEDL-DLIKMADTEGEVVDILDSFYKGRSL 224
>gi|407717880|ref|YP_006795285.1| hypothetical protein C270_01845 [Leuconostoc carnosum JB16]
gi|407241636|gb|AFT81286.1| hypothetical protein C270_01845 [Leuconostoc carnosum JB16]
Length = 181
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 19/130 (14%)
Query: 2 LSPKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEM 55
+SP+ L + + L+ + S RK L+D A A + LPGG GTL+E+
Sbjct: 65 ISPRNLAEDSIEADEITTLIKVDTMSERKQLLMDNA--------DAFIVLPGGFGTLEEL 116
Query: 56 FEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSN 115
++ I RIG P +++N D FY L ++ D G V ++ + +I +
Sbjct: 117 AQV---ISWNRIGLHAK-PLILLNIDGFYDGLWQWIIDSVHHGFVDDHDLEYI-QIFTTT 171
Query: 116 SEALSYLAEF 125
AL Y+ +F
Sbjct: 172 KAALDYIDQF 181
>gi|319639945|ref|ZP_07994672.1| lysine decarboxylase [Bacteroides sp. 3_1_40A]
gi|317388223|gb|EFV69075.1| lysine decarboxylase [Bacteroides sp. 3_1_40A]
Length = 177
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 22 ARKHGLIDCAVRNDS-CDRT--------AVVALPGGVGTLDEMFEILALIQLERIGSELP 72
R L+D R D+ DR V+ALPGGVGTLDE+F ++A L+ ++
Sbjct: 72 GRASDLVDVTFRTDNLSDRKDVMLNESDVVIALPGGVGTLDEVFHVMAAATLDYHRKKV- 130
Query: 73 VPFLVMNYDSFYKKLLDFLGDCE 95
+ N + F+ ++DFL E
Sbjct: 131 ---IFYNINGFWNGIIDFLAGLE 150
>gi|228472429|ref|ZP_04057193.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
33624]
gi|228276203|gb|EEK14944.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
33624]
Length = 228
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 19/116 (16%)
Query: 16 DLRF--FSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPV 73
+LRF F ARK + + A V PGG GT+DE+FE + LIQ +I P
Sbjct: 118 NLRFNYFFARKVMFVRYS--------QAFVVFPGGFGTMDELFEAITLIQTTKIE---PF 166
Query: 74 PFLVMNYDSFYKKLLDFLGDC--EDWGTV-AKDEVASLWKICDSNSEALSYLAEFY 126
P +++ + F+ L+ ++ + + +G + AKD ++KI D+ E + +FY
Sbjct: 167 PIILVGTE-FWSGLVAWIKEVLLDKFGNISAKD--MDIFKIVDTADEVEEIIEKFY 219
>gi|294775004|ref|ZP_06740533.1| conserved hypothetical protein TIGR00730 [Bacteroides vulgatus
PC510]
gi|345516951|ref|ZP_08796431.1| lysine decarboxylase [Bacteroides sp. 4_3_47FAA]
gi|254833731|gb|EET14040.1| lysine decarboxylase [Bacteroides sp. 4_3_47FAA]
gi|294451048|gb|EFG19519.1| conserved hypothetical protein TIGR00730 [Bacteroides vulgatus
PC510]
Length = 214
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Query: 22 ARKHGLIDCAVRNDS-CDRT--------AVVALPGGVGTLDEMFEILALIQLERIGSELP 72
R L+D R D+ DR V+ALPGGVGTLDE+F ++A L+ ++
Sbjct: 109 GRASDLVDVTFRTDNLSDRKDVMLNESDVVIALPGGVGTLDEVFHVMAAATLDYHRKKV- 167
Query: 73 VPFLVMNYDSFYKKLLDFLGDCE 95
+ N + F+ ++DFL E
Sbjct: 168 ---IFYNINGFWNGIIDFLAGLE 187
>gi|407002367|gb|EKE19143.1| hypothetical protein ACD_9C00120G0001 [uncultured bacterium]
Length = 126
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
Query: 36 SCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCE 95
+ A V PGG GT+DE+FEIL LIQ E+ ++PV + Y G E
Sbjct: 34 AASAQAYVYFPGGFGTIDELFEILTLIQTEK-SEKIPVVLVGKEY----------WGGLE 82
Query: 96 DW---------GTVAKDEVASLWKICDSNSEAL 119
DW T+ K ++ L+ I D+ EA
Sbjct: 83 DWIKEFQLEKLATINKSDL-DLFSIVDTAQEAF 114
>gi|345851200|ref|ZP_08804181.1| hypothetical protein SZN_15648 [Streptomyces zinciresistens K42]
gi|345637354|gb|EGX58880.1| hypothetical protein SZN_15648 [Streptomyces zinciresistens K42]
Length = 252
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A V LPGG+GTLDE+FE L L+Q +++ + P+
Sbjct: 151 LNFRYFFVRKMMFVKYA--------QGFVVLPGGLGTLDELFEALTLVQTQKV-TRFPI- 200
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
V+ +++ L+D+L D A ++ L+ + D EA++ +++
Sbjct: 201 --VLFGAAYWGGLVDWLKDTLVAEGKASEKDLLLFHVTDDVDEAVALVSK 248
>gi|372487148|ref|YP_005026713.1| hypothetical protein Dsui_0458 [Dechlorosoma suillum PS]
gi|359353701|gb|AEV24872.1| TIGR00730 family protein [Dechlorosoma suillum PS]
Length = 242
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 14/112 (12%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R F ARK + A +A V +PGG GTLDE+ E L LIQ G +P L
Sbjct: 127 FRHFFARKFMFVKFA--------SAYVVMPGGFGTLDEVLEALTLIQ---TGKSRKIP-L 174
Query: 77 VMNYDSFYKKLLDFLGD-CEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
++ ++ F++ LL++ D G V+ D++ L ++ D + + + + Y+
Sbjct: 175 ILVHEPFWRGLLEWFKDRLVGEGMVSPDDL-DLIQVIDEPDQIVEAIFKHYE 225
>gi|167576982|ref|ZP_02369856.1| decarboxylase family protein [Burkholderia thailandensis TXDOH]
Length = 298
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 14/99 (14%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I + LPV V+
Sbjct: 202 YFAIRKLHLLERA--------KAAVFFPGGYGTCDELFEVLTLLQTRKI-APLPV---VL 249
Query: 79 NYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSE 117
+F++ +DF G D G + ++ L++ C++ E
Sbjct: 250 VGRAFWRSAVDF-GFFVDEGMIDPHDM-ELFRFCETADE 286
>gi|90423596|ref|YP_531966.1| hypothetical protein RPC_2093 [Rhodopseudomonas palustris BisB18]
gi|90105610|gb|ABD87647.1| conserved hypothetical protein 730 [Rhodopseudomonas palustris
BisB18]
Length = 210
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A VALPGG+GTL+E+ E L QL R P L+ N D F++ LL L D +
Sbjct: 112 AFVALPGGIGTLEELVEQLTWQQLGRHKK----PILIANIDGFWEPLLALLDHMRDTAFI 167
Query: 101 AKD 103
K+
Sbjct: 168 RKN 170
>gi|345009124|ref|YP_004811478.1| hypothetical protein [Streptomyces violaceusniger Tu 4113]
gi|344035473|gb|AEM81198.1| Conserved hypothetical protein CHP00730 [Streptomyces
violaceusniger Tu 4113]
Length = 249
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F RK + A V LPGG+GTLDE FE L L+Q +++ + P+
Sbjct: 148 VNFRYFFVRKTMFVKYA--------QGFVVLPGGLGTLDECFEALTLVQTKKV-TRFPI- 197
Query: 75 FLVMNYDSFYKKLLDFL 91
V+ +++K L+D+L
Sbjct: 198 --VLFGSAYWKGLVDWL 212
>gi|448242488|ref|YP_007406541.1| hypothetical protein SMWW4_v1c27270 [Serratia marcescens WW4]
gi|445212852|gb|AGE18522.1| hypothetical protein SMWW4_v1c27270 [Serratia marcescens WW4]
gi|453065205|gb|EMF06168.1| hypothetical protein F518_08923 [Serratia marcescens VGH107]
Length = 190
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 26 GLIDCAVRNDSCDRTA--------VVALPGGVGTLDEMFEILALIQLERIGSELPVPFLV 77
GL + V D R A +ALPGG+GTL+E+FEI Q+ P +
Sbjct: 78 GLTELEVVPDMHTRKARMAALADSFIALPGGIGTLEELFEIWTWGQIGYHNK----PVGL 133
Query: 78 MNYDSFYKKLLDFLGDCEDWGTVAKDEVASL 108
+N + FY+ L FL D G + D + +L
Sbjct: 134 LNVNGFYRPLSQFLEHVADQGFMRHDYLGTL 164
>gi|258648279|ref|ZP_05735748.1| decarboxylase family protein [Prevotella tannerae ATCC 51259]
gi|260852198|gb|EEX72067.1| decarboxylase family protein [Prevotella tannerae ATCC 51259]
Length = 191
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 23 RKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDS 82
RK L D +D+C +ALPGGVGTL+E+ EI+ QL G L P +++N
Sbjct: 88 RKEKLADL---SDAC-----IALPGGVGTLEELIEIITWKQL---GLYLK-PIIILNTCG 135
Query: 83 FYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVHE 137
+Y LL L D ++ ++W++ + EA+ LAE L DKRV +
Sbjct: 136 YYDPLLAQLDRAAD-ERFMREGHKAIWRVAATPEEAI-LLAETTPL--WDKRVQK 186
>gi|440226053|ref|YP_007333144.1| multicopper oxidase family protein [Rhizobium tropici CIAT 899]
gi|440037564|gb|AGB70598.1| multicopper oxidase family protein [Rhizobium tropici CIAT 899]
Length = 207
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 10 QESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGS 69
Q +L+ ARKHG+ + A A VALPGG+GTL+E+ EI+ QL R
Sbjct: 87 QLDELIITPDMHARKHGMFERA--------DAFVALPGGIGTLEEIVEIMTWGQLGR--H 136
Query: 70 ELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
E P+ F N + F+ +++ + + G V
Sbjct: 137 EKPMVF--ANINGFWDPMMELIRHMTEEGFV 165
>gi|317482285|ref|ZP_07941306.1| hypothetical protein HMPREF0177_00699 [Bifidobacterium sp.
12_1_47BFAA]
gi|419847035|ref|ZP_14370237.1| TIGR00730 family protein [Bifidobacterium longum subsp. longum
1-6B]
gi|419854798|ref|ZP_14377574.1| TIGR00730 family protein [Bifidobacterium longum subsp. longum 44B]
gi|316916301|gb|EFV37702.1| hypothetical protein HMPREF0177_00699 [Bifidobacterium sp.
12_1_47BFAA]
gi|386412344|gb|EIJ27016.1| TIGR00730 family protein [Bifidobacterium longum subsp. longum
1-6B]
gi|386417075|gb|EIJ31566.1| TIGR00730 family protein [Bifidobacterium longum subsp. longum 44B]
Length = 313
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ R+F RK I + + V+ PGG GTLDEMFE+L L+Q ++ + +PV
Sbjct: 212 MSFRYFFVRKTMFIKYS--------SGVIVCPGGFGTLDEMFELLTLVQTHKV-ANIPV- 261
Query: 75 FLVMNYDSFYKKLLDFL 91
V+ +++ L D+L
Sbjct: 262 --VLYGKEYWQGLFDWL 276
>gi|23465514|ref|NP_696117.1| hypothetical protein BL0941 [Bifidobacterium longum NCC2705]
gi|23326173|gb|AAN24753.1| hypothetical protein BL0941 [Bifidobacterium longum NCC2705]
Length = 313
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ R+F RK I + + V+ PGG GTLDEMFE+L L+Q ++ + +PV
Sbjct: 212 MSFRYFFVRKTMFIKYS--------SGVIVCPGGFGTLDEMFELLTLVQTHKV-ANIPV- 261
Query: 75 FLVMNYDSFYKKLLDFL 91
V+ +++ L D+L
Sbjct: 262 --VLYGKEYWQGLFDWL 276
>gi|403725736|ref|ZP_10946748.1| hypothetical protein GORHZ_123_00230 [Gordonia rhizosphera NBRC
16068]
gi|403204858|dbj|GAB91079.1| hypothetical protein GORHZ_123_00230 [Gordonia rhizosphera NBRC
16068]
Length = 274
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 20/110 (18%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R+F RK + A A V LPGG GTLDEMFE L L+Q +++ P+ +
Sbjct: 171 FRYFFVRKTMFVKYA--------QAFVCLPGGFGTLDEMFEALTLVQTKKV-VRFPIVLI 221
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVAS----LWKICDSNSEALSYL 122
N+ + L+D++ D +AK +++ L + D SEA+ +
Sbjct: 222 GRNH---WSGLIDWMRDV----LLAKRMISADDLDLLHVVDEPSEAVEII 264
>gi|385331063|ref|YP_005885014.1| hypothetical protein HP15_1322 [Marinobacter adhaerens HP15]
gi|311694213|gb|ADP97086.1| conserved hypothetical protein [Marinobacter adhaerens HP15]
Length = 297
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKL--LDFL 91
A+VA PGG GTLDE+FE L L+Q I P+P +++ +SF+++ +DFL
Sbjct: 207 ALVAFPGGYGTLDELFETLTLVQTRTIA---PLPIVLVG-ESFWRQAVNIDFL 255
>gi|322690869|ref|YP_004220439.1| hypothetical protein BLLJ_0679 [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320455725|dbj|BAJ66347.1| conserved hypothetical protein [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 313
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ R+F RK I + + V+ PGG GTLDEMFE+L L+Q ++ + +PV
Sbjct: 212 MSFRYFFVRKTMFIKYS--------SGVIVCPGGFGTLDEMFELLTLVQTHKV-ANIPV- 261
Query: 75 FLVMNYDSFYKKLLDFL 91
V+ +++ L D+L
Sbjct: 262 --VLYGKEYWQGLFDWL 276
>gi|225629476|ref|ZP_03787509.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237817396|ref|ZP_04596388.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260756229|ref|ZP_05868577.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260760402|ref|ZP_05872750.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260763642|ref|ZP_05875974.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260882053|ref|ZP_05893667.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261216469|ref|ZP_05930750.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261217613|ref|ZP_05931894.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261312920|ref|ZP_05952117.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261318315|ref|ZP_05957512.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261320490|ref|ZP_05959687.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261322750|ref|ZP_05961947.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261750717|ref|ZP_05994426.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|265985151|ref|ZP_06097886.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|265986113|ref|ZP_06098670.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265990318|ref|ZP_06102875.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265992575|ref|ZP_06105132.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|294853980|ref|ZP_06794652.1| hypothetical protein BAZG_02966 [Brucella sp. NVSL 07-0026]
gi|225615972|gb|EEH13021.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237788209|gb|EEP62425.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260670720|gb|EEX57660.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260674063|gb|EEX60884.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260676337|gb|EEX63158.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260871581|gb|EEX78650.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260918076|gb|EEX84937.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260922702|gb|EEX89270.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293180|gb|EEX96676.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261297538|gb|EEY01035.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261298730|gb|EEY02227.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261301946|gb|EEY05443.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261740470|gb|EEY28396.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|262763445|gb|EEZ09477.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263000987|gb|EEZ13677.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|264658310|gb|EEZ28571.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|264663743|gb|EEZ34004.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|294819635|gb|EFG36635.1| hypothetical protein BAZG_02966 [Brucella sp. NVSL 07-0026]
Length = 282
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD--FLGDCEDWG 98
AV PGG GT+DE+FE + LIQ R+ +P L++ F+ K ++ FL + G
Sbjct: 201 AVCVFPGGFGTMDELFEAMTLIQTNRM-ERMP---LILFGKEFWTKAINIEFLAEQ---G 253
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFYDL 128
T++ ++ L ++ EA ++ +FY L
Sbjct: 254 TISPADI-ELLNFVETADEAWGHIKDFYKL 282
>gi|261220837|ref|ZP_05935118.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|265995807|ref|ZP_06108364.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260919421|gb|EEX86074.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|262550104|gb|EEZ06265.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 282
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD--FLGDCEDWG 98
AV PGG GT+DE+FE + LIQ R+ +P L++ F+ K ++ FL + G
Sbjct: 201 AVCVFPGGFGTMDELFEAMTLIQTNRM-ERMP---LILFGKEFWTKAINIEFLAEQ---G 253
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFYDL 128
T++ ++ L ++ EA ++ +FY L
Sbjct: 254 TISPADI-ELLNFVETADEAWGHIKDFYKL 282
>gi|148558260|ref|YP_001257938.1| hypothetical protein BOV_A0968 [Brucella ovis ATCC 25840]
gi|189023106|ref|YP_001932847.1| hypothetical protein BAbS19_II09160 [Brucella abortus S19]
gi|256262084|ref|ZP_05464616.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260545091|ref|ZP_05820912.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260565072|ref|ZP_05835557.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|261757215|ref|ZP_06000924.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|297249208|ref|ZP_06932909.1| hypothetical protein BAYG_01947 [Brucella abortus bv. 5 str. B3196]
gi|306839549|ref|ZP_07472356.1| 3-isopropylmalate dehydrogenase [Brucella sp. NF 2653]
gi|376271525|ref|YP_005114570.1| Rossmann fold nucleotide-binding protein [Brucella abortus A13334]
gi|384213541|ref|YP_005602624.1| hypothetical protein BM590_B1003 [Brucella melitensis M5-90]
gi|384410643|ref|YP_005599263.1| hypothetical protein BM28_B1005 [Brucella melitensis M28]
gi|384447140|ref|YP_005661358.1| hypothetical protein [Brucella melitensis NI]
gi|423168239|ref|ZP_17154941.1| TIGR00730 family protein [Brucella abortus bv. 1 str. NI435a]
gi|423172326|ref|ZP_17159000.1| TIGR00730 family protein [Brucella abortus bv. 1 str. NI474]
gi|423173943|ref|ZP_17160613.1| TIGR00730 family protein [Brucella abortus bv. 1 str. NI486]
gi|423175819|ref|ZP_17162485.1| TIGR00730 family protein [Brucella abortus bv. 1 str. NI488]
gi|423181755|ref|ZP_17168395.1| TIGR00730 family protein [Brucella abortus bv. 1 str. NI010]
gi|423184888|ref|ZP_17171524.1| TIGR00730 family protein [Brucella abortus bv. 1 str. NI016]
gi|423188041|ref|ZP_17174654.1| TIGR00730 family protein [Brucella abortus bv. 1 str. NI021]
gi|423190458|ref|ZP_17177067.1| TIGR00730 family protein [Brucella abortus bv. 1 str. NI259]
gi|148369545|gb|ABQ62417.1| putative conserved hypothetical protein TIGR00730 [Brucella ovis
ATCC 25840]
gi|189021680|gb|ACD74401.1| Conserved hypothetical protein 730 [Brucella abortus S19]
gi|260098362|gb|EEW82236.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260152715|gb|EEW87808.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|261737199|gb|EEY25195.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|263091773|gb|EEZ16104.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|297173077|gb|EFH32441.1| hypothetical protein BAYG_01947 [Brucella abortus bv. 5 str. B3196]
gi|306405381|gb|EFM61653.1| 3-isopropylmalate dehydrogenase [Brucella sp. NF 2653]
gi|326411190|gb|ADZ68254.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326554481|gb|ADZ89120.1| conserved hypothetical protein [Brucella melitensis M5-90]
gi|349745137|gb|AEQ10679.1| hypothetical protein BMNI_II0969 [Brucella melitensis NI]
gi|363402697|gb|AEW19666.1| putative Rossmann fold nucleotide-binding protein [Brucella abortus
A13334]
gi|374536748|gb|EHR08268.1| TIGR00730 family protein [Brucella abortus bv. 1 str. NI474]
gi|374538732|gb|EHR10239.1| TIGR00730 family protein [Brucella abortus bv. 1 str. NI435a]
gi|374539944|gb|EHR11446.1| TIGR00730 family protein [Brucella abortus bv. 1 str. NI486]
gi|374546345|gb|EHR17805.1| TIGR00730 family protein [Brucella abortus bv. 1 str. NI010]
gi|374547188|gb|EHR18647.1| TIGR00730 family protein [Brucella abortus bv. 1 str. NI016]
gi|374554221|gb|EHR25634.1| TIGR00730 family protein [Brucella abortus bv. 1 str. NI021]
gi|374556498|gb|EHR27903.1| TIGR00730 family protein [Brucella abortus bv. 1 str. NI259]
gi|374556619|gb|EHR28023.1| TIGR00730 family protein [Brucella abortus bv. 1 str. NI488]
Length = 279
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 18/115 (15%)
Query: 16 DLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 75
+ +F+ RK + A AV PGG GT+DE+FE + LIQ R+ +P
Sbjct: 181 NFHYFAIRKMHFLMRA--------KAVCVFPGGFGTMDELFEAMTLIQTNRM-ERMP--- 228
Query: 76 LVMNYDSFYKKLLD--FLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 128
L++ F+ K ++ FL + GT++ ++ L ++ EA ++ +FY L
Sbjct: 229 LILFGKEFWTKAINIEFLAEQ---GTISPADI-ELLNFVETADEAWGHIKDFYKL 279
>gi|123969153|ref|YP_001010011.1| dehydrogenase [Prochlorococcus marinus str. AS9601]
gi|123199263|gb|ABM70904.1| Predicted dehydrogenase [Prochlorococcus marinus str. AS9601]
Length = 288
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V PGG GTLDE+FE+L L Q G + +P ++ + ++ K+++F D G +
Sbjct: 206 AAVFFPGGFGTLDELFELLTLCQ---TGMKTKIPIILFGRE-YWNKIINF-EYLADLGLI 260
Query: 101 AKDEVASLWKICDSNSEA 118
+DE +L++ D+ SEA
Sbjct: 261 -EDEHLNLFQYADTASEA 277
>gi|227545999|ref|ZP_03976048.1| possible Rossmann fold nucleotide-binding protein [Bifidobacterium
longum subsp. longum ATCC 55813]
gi|227213633|gb|EEI81482.1| possible Rossmann fold nucleotide-binding protein [Bifidobacterium
longum subsp. infantis ATCC 55813]
Length = 313
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 14/106 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ R+F RK I + + V+ PGG GTLDEMFE+L L+Q ++ + +PV
Sbjct: 212 MSFRYFFVRKTMFIKYS--------SGVIVCPGGFGTLDEMFELLTLVQTHKV-ANIPV- 261
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEAL 119
V+ +++ L D+L G + G ++ + L + D EA+
Sbjct: 262 --VLYGKEYWQGLFDWLNGPVAEHGMISTID-PKLVTVTDDADEAV 304
>gi|121999200|ref|YP_001003987.1| hypothetical protein Hhal_2422 [Halorhodospira halophila SL1]
gi|121590605|gb|ABM63185.1| conserved hypothetical protein 730 [Halorhodospira halophila SL1]
Length = 241
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 17 LRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 76
R F +RK + A +A V LPGG GTLDE+ EIL L+Q G +P +
Sbjct: 126 FRHFFSRKVMFVKYA--------SAYVVLPGGFGTLDELAEILTLVQ---TGKTPKIP-I 173
Query: 77 VMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
++ + F++KL+++ + + L+K+ D+ E ++ + + Y+
Sbjct: 174 ILVHSPFWEKLVEWFQERLVAEAAIDADDMHLFKVVDTPEEVVAAIFDHYE 224
>gi|317507432|ref|ZP_07965165.1| hypothetical protein HMPREF9336_01537 [Segniliparus rugosus ATCC
BAA-974]
gi|316254279|gb|EFV13616.1| hypothetical protein HMPREF9336_01537 [Segniliparus rugosus ATCC
BAA-974]
Length = 186
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A VALPGG+GTLDE+F++ QL + P P V+N + F+ +L + ++ G +
Sbjct: 99 AAVALPGGLGTLDELFDVWGSAQL----ALHPKPVGVLNVNGFWTSMLTAVRGMQEAGFI 154
Query: 101 AKDEVASLWKICDSNSEALSYLAEF 125
A+ L + +S+ + L + +F
Sbjct: 155 AERSY-DLLIVAESSEDYLRQVGDF 178
>gi|23500750|ref|NP_700190.1| hypothetical protein BRA1027 [Brucella suis 1330]
gi|161621075|ref|YP_001594961.1| hypothetical protein BCAN_B1048 [Brucella canis ATCC 23365]
gi|163845141|ref|YP_001622796.1| hypothetical protein BSUIS_B1023 [Brucella suis ATCC 23445]
gi|376278972|ref|YP_005109005.1| hypothetical protein BSVBI22_B1018 [Brucella suis VBI22]
gi|384223532|ref|YP_005614697.1| hypothetical protein BS1330_II1019 [Brucella suis 1330]
gi|23464404|gb|AAN34195.1| conserved hypothetical protein TIGR00730, putative [Brucella suis
1330]
gi|161337886|gb|ABX64190.1| Hypothetical protein BCAN_B1048 [Brucella canis ATCC 23365]
gi|163675864|gb|ABY39974.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|343384980|gb|AEM20471.1| hypothetical protein BS1330_II1019 [Brucella suis 1330]
gi|358260410|gb|AEU08143.1| hypothetical protein BSVBI22_B1018 [Brucella suis VBI22]
Length = 276
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD--FLGDCEDWG 98
AV PGG GT+DE+FE + LIQ R+ +P L++ F+ K ++ FL + G
Sbjct: 195 AVCVFPGGFGTMDELFEAMTLIQTNRM-ERMP---LILFGKEFWTKAINIEFLAEQ---G 247
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFYDL 128
T++ ++ L ++ EA ++ +FY L
Sbjct: 248 TISPADI-ELLNFVETADEAWGHIKDFYKL 276
>gi|323446322|gb|EGB02527.1| hypothetical protein AURANDRAFT_35169 [Aureococcus anophagefferens]
Length = 226
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC 94
+ CD A++ +PGGVGTLDE+++ +L QL G + P +++N D +Y L L
Sbjct: 97 EHCD--ALIVMPGGVGTLDELWDAASLQQL---GFKTSRPVVLVNLDGYYDATLAQLRRA 151
Query: 95 EDWGTVAK---------DEVASLWKICDSNSEALSYLA 123
D G +K +V + C++ A +Y A
Sbjct: 152 HDEGLTSKPPAEILHAVPDVGAALAWCEAQQTADAYTA 189
>gi|261753973|ref|ZP_05997682.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261743726|gb|EEY31652.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 282
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD--FLGDCEDWG 98
AV PGG GT+DE+FE + LIQ R+ +P L++ F+ K ++ FL + G
Sbjct: 201 AVCVFPGGFGTMDELFEAMTLIQTNRM-ERMP---LILFGKEFWTKAINIEFLAEQ---G 253
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFYDL 128
T++ ++ L ++ EA ++ +FY L
Sbjct: 254 TISPADI-ELLNFVETADEAWGHIKDFYKL 282
>gi|260567727|ref|ZP_05838196.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|376277463|ref|YP_005153524.1| hypothetical protein BCA52141_II1527 [Brucella canis HSK A52141]
gi|260154392|gb|EEW89473.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|363405837|gb|AEW16131.1| hypothetical protein BCA52141_II1527 [Brucella canis HSK A52141]
Length = 279
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD--FLGDCEDWG 98
AV PGG GT+DE+FE + LIQ R+ +P L++ F+ K ++ FL + G
Sbjct: 198 AVCVFPGGFGTMDELFEAMTLIQTNRM-ERMP---LILFGKEFWTKAINIEFLAEQ---G 250
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFYDL 128
T++ ++ L ++ EA ++ +FY L
Sbjct: 251 TISPADI-ELLNFVETADEAWGHIKDFYKL 279
>gi|149372763|ref|ZP_01891784.1| hypothetical protein SCB49_12409 [unidentified eubacterium SCB49]
gi|149354460|gb|EDM43025.1| hypothetical protein SCB49_12409 [unidentified eubacterium SCB49]
Length = 229
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+D +F RK + + V +PGG+GTLDE FE LIQ +I ++ P+
Sbjct: 120 IDFDYFFVRKVMFVKYS--------QGFVVMPGGMGTLDEFFEAFTLIQTHKI-AKFPI- 169
Query: 75 FLVMNYDSFYKKLLDFLGDC--EDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
++ +F+ L+D++ E ++ ++ +L I D+ E L L FY+
Sbjct: 170 --ILVSTAFWSGLIDWIKTTVLEANNNISPGDL-NLIHIVDTEDEVLDILNSFYN 221
>gi|375107291|ref|ZP_09753552.1| TIGR00730 family protein [Burkholderiales bacterium JOSHI_001]
gi|374668022|gb|EHR72807.1| TIGR00730 family protein [Burkholderiales bacterium JOSHI_001]
Length = 297
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A+V PGG GTLDE+FE + L+Q G P L+ +F+ KL++F D G +
Sbjct: 202 ALVCFPGGFGTLDELFETMTLVQ---TGKSRKRPILLFG-RAFWDKLINFQ-HLVDTGMI 256
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+ ++ L+ ++ EA + LA+ Y
Sbjct: 257 SASDLG-LFHFVETAEEAWARLADHY 281
>gi|23336270|ref|ZP_00121494.1| COG1611: Predicted Rossmann fold nucleotide-binding protein
[Bifidobacterium longum DJO10A]
gi|189439545|ref|YP_001954626.1| DNA uptake protein [Bifidobacterium longum DJO10A]
gi|239621945|ref|ZP_04664976.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|312132954|ref|YP_004000293.1| DNA uptake protein [Bifidobacterium longum subsp. longum BBMN68]
gi|322688894|ref|YP_004208628.1| hypothetical protein BLIF_0707 [Bifidobacterium longum subsp.
infantis 157F]
gi|384201754|ref|YP_005587501.1| hypothetical protein BLNIAS_01771 [Bifidobacterium longum subsp.
longum KACC 91563]
gi|419849770|ref|ZP_14372797.1| TIGR00730 family protein [Bifidobacterium longum subsp. longum 35B]
gi|419853113|ref|ZP_14375951.1| TIGR00730 family protein [Bifidobacterium longum subsp. longum
2-2B]
gi|189427980|gb|ACD98128.1| Putative DNA uptake protein [Bifidobacterium longum DJO10A]
gi|239515136|gb|EEQ55003.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|291517061|emb|CBK70677.1| conserved hypothetical protein, DprA/Smf-related, family 2
[Bifidobacterium longum subsp. longum F8]
gi|311773935|gb|ADQ03423.1| Putative DNA uptake protein [Bifidobacterium longum subsp. longum
BBMN68]
gi|320460230|dbj|BAJ70850.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis 157F]
gi|338754761|gb|AEI97750.1| hypothetical protein BLNIAS_01771 [Bifidobacterium longum subsp.
longum KACC 91563]
gi|386408891|gb|EIJ23778.1| TIGR00730 family protein [Bifidobacterium longum subsp. longum
2-2B]
gi|386411123|gb|EIJ25879.1| TIGR00730 family protein [Bifidobacterium longum subsp. longum 35B]
Length = 313
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 14/106 (13%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
+ R+F RK I + + V+ PGG GTLDEMFE+L L+Q ++ + +PV
Sbjct: 212 MSFRYFFVRKTMFIKYS--------SGVIVCPGGFGTLDEMFELLTLVQTHKV-ANIPV- 261
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEAL 119
V+ +++ L D+L G + G ++ + L + D EA+
Sbjct: 262 --VLYGKEYWQGLFDWLNGPVAEHGMISTID-PKLVTVTDDADEAV 304
>gi|386827724|ref|ZP_10114831.1| TIGR00730 family protein [Beggiatoa alba B18LD]
gi|386428608|gb|EIJ42436.1| TIGR00730 family protein [Beggiatoa alba B18LD]
Length = 240
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 12/113 (10%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R F ARK + + +A V LPGG GTLDE+ E+L L+Q +I S +P
Sbjct: 125 LNFRHFFARKVMFVRYS--------SAYVVLPGGFGTLDELAEVLTLVQTHKIPS---IP 173
Query: 75 FLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYD 127
+++ + +++ L+D++ + E +L I DS + + ++Y+
Sbjct: 174 IILVCRE-YWQGLIDWMHNTLIVHRTISPEDMNLITIVDSAEMVVKTIFDYYE 225
>gi|17988615|ref|NP_541248.1| 3-isopropylmalate dehydrogenase [Brucella melitensis bv. 1 str.
16M]
gi|62317856|ref|YP_223709.1| hypothetical protein BruAb2_0967 [Brucella abortus bv. 1 str.
9-941]
gi|83269835|ref|YP_419126.1| hypothetical protein BAB2_0990 [Brucella melitensis biovar Abortus
2308]
gi|225686782|ref|YP_002734754.1| hypothetical protein BMEA_B1013 [Brucella melitensis ATCC 23457]
gi|256015786|ref|YP_003105795.1| hypothetical protein BMI_II1021 [Brucella microti CCM 4915]
gi|340792789|ref|YP_004758253.1| hypothetical protein BPI_II1083 [Brucella pinnipedialis B2/94]
gi|17984417|gb|AAL53512.1| 3-isopropylmalate dehydrogenase [Brucella melitensis bv. 1 str.
16M]
gi|62198049|gb|AAX76348.1| conserved hypothetical protein TIGR00730, hypothetical [Brucella
abortus bv. 1 str. 9-941]
gi|82940109|emb|CAJ13156.1| Conserved hypothetical protein 730 [Brucella melitensis biovar
Abortus 2308]
gi|225642887|gb|ACO02800.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|255998446|gb|ACU50133.1| hypothetical protein BMI_II1021 [Brucella microti CCM 4915]
gi|340561248|gb|AEK56485.1| hypothetical protein BPI_II1083 [Brucella pinnipedialis B2/94]
Length = 276
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLD--FLGDCEDWG 98
AV PGG GT+DE+FE + LIQ R+ +P L++ F+ K ++ FL + G
Sbjct: 195 AVCVFPGGFGTMDELFEAMTLIQTNRM-ERMP---LILFGKEFWTKAINIEFLAEQ---G 247
Query: 99 TVAKDEVASLWKICDSNSEALSYLAEFYDL 128
T++ ++ L ++ EA ++ +FY L
Sbjct: 248 TISPADI-ELLNFVETADEAWGHIKDFYKL 276
>gi|56552575|ref|YP_163414.1| hypothetical protein ZMO1679 [Zymomonas mobilis subsp. mobilis ZM4]
gi|56544149|gb|AAV90303.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 292
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A PGG GTLDE+FE+L LI R+ + VP L D F+ K+++F E+
Sbjct: 200 AFAIFPGGFGTLDEVFELLTLIHTHRLEA---VPILFYGRD-FWNKIINFDALVEESMIS 255
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
A+D ++ D+ E + + +F+
Sbjct: 256 AED--LRFFQFVDTAEEGWAVICDFW 279
>gi|421478175|ref|ZP_15925943.1| TIGR00730 family protein [Burkholderia multivorans CF2]
gi|400225194|gb|EJO55376.1| TIGR00730 family protein [Burkholderia multivorans CF2]
Length = 346
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 18/110 (16%)
Query: 19 FFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVM 78
+F+ RK L++ A A V PGG GT DE+FE+L L+Q +I P+P +++
Sbjct: 217 YFAIRKLHLLERA--------KAAVFFPGGYGTFDELFEVLTLLQTRKIA---PLPVILV 265
Query: 79 NYDSFYKKLLD--FLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFY 126
++++ + +D FL D G + + ++ L+ C+S ++ + +Y
Sbjct: 266 G-EAYWSRAVDVAFLADE---GMIDRRDL-ELFTYCESAAQIWHAIGSWY 310
>gi|21223509|ref|NP_629288.1| hypothetical protein SCO5140 [Streptomyces coelicolor A3(2)]
gi|289769280|ref|ZP_06528658.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|9714425|emb|CAC01341.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
gi|289699479|gb|EFD66908.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length = 252
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 14/111 (12%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F RK + A V LPGG+GTLDE+FE L L+Q +++ + P+
Sbjct: 151 LNFRYFFVRKMMFVKYA--------QGFVVLPGGLGTLDELFEALTLVQTQKV-TRFPI- 200
Query: 75 FLVMNYDSFYKKLLDFL-GDCEDWGTVAKDEVASLWKICDSNSEALSYLAE 124
V+ ++ L+D+L G G A+ ++ L+ + D EA++ +++
Sbjct: 201 --VLFGSEYWGGLVDWLRGTLVAQGKAAEKDLM-LFHVTDDVDEAVALVSK 248
>gi|448111409|ref|XP_004201834.1| Piso0_002038 [Millerozyma farinosa CBS 7064]
gi|359464823|emb|CCE88528.1| Piso0_002038 [Millerozyma farinosa CBS 7064]
Length = 230
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC 94
A VALPGG GTL+E+ E++ QL P ++ N D FY L+ F+ D
Sbjct: 137 AFVALPGGYGTLEELMEVVTWFQLNIHNK----PIIIYNVDGFYDGLMRFIQDA 186
>gi|340359556|ref|ZP_08682038.1| methionyl-tRNA formyltransferase [Actinomyces sp. oral taxon 448
str. F0400]
gi|339884399|gb|EGQ74187.1| methionyl-tRNA formyltransferase [Actinomyces sp. oral taxon 448
str. F0400]
Length = 259
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 26/117 (22%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
++ R+F ARK + + V +PGG+GTLDE+FE + L+Q ++ S P+
Sbjct: 145 INFRYFFARKTMFLKYS--------DGFVVMPGGMGTLDELFEAVTLVQTGKV-SSFPIA 195
Query: 75 FLVMNYDSFYKKLLDFLGDCEDW--GTVAKDEVAS-----LWKICDSNSEALSYLAE 124
+ D+ G W GT+A+ S L + DS EA+ Y+ +
Sbjct: 196 LVGS----------DYWGGLTHWIRGTLARAGAISPQDVDLLHVVDSAEEAVDYVVD 242
>gi|119385242|ref|YP_916298.1| hypothetical protein Pden_2515 [Paracoccus denitrificans PD1222]
gi|119375009|gb|ABL70602.1| conserved hypothetical protein 730 [Paracoccus denitrificans
PD1222]
Length = 284
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
AV PGG GT+DEMFE L LIQ R+ +PF++ + F+ K++++ E GT+
Sbjct: 201 AVTVFPGGFGTMDEMFEALTLIQTGRMRR---IPFILFGPE-FWHKVINWEALAEA-GTI 255
Query: 101 AKDEVASLWKICDSNSEALSYL 122
+ +++ L +S EA+ +
Sbjct: 256 SPEDL-ELISFVESADEAVEII 276
>gi|339451825|ref|ZP_08655195.1| hypothetical protein LlacK3_12165 [Leuconostoc lactis KCTC 3528]
Length = 185
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 19/128 (14%)
Query: 2 LSPKVLCKQE------SQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEM 55
+SPK L ++ +QL+ + S RK L+ A A + LPGG GTL+E+
Sbjct: 69 VSPKNLAEETMPAADITQLMTVETMSERKELLMSLA--------DAFIVLPGGFGTLEEL 120
Query: 56 FEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSN 115
++L+ RIG P ++ N + +Y L D+L D ++A++ ++ S
Sbjct: 121 AQVLS---WARIGLHHK-PLVLFNVNGYYDHLWDWLADSVTADFAVPTDLAAV-RLYQSV 175
Query: 116 SEALSYLA 123
+AL YLA
Sbjct: 176 DDALRYLA 183
>gi|300782970|ref|YP_003763261.1| lysine decarboxylase [Amycolatopsis mediterranei U32]
gi|384146192|ref|YP_005529008.1| lysine decarboxylase [Amycolatopsis mediterranei S699]
gi|399534856|ref|YP_006547518.1| lysine decarboxylase [Amycolatopsis mediterranei S699]
gi|299792484|gb|ADJ42859.1| putative lysine decarboxylase [Amycolatopsis mediterranei U32]
gi|340524346|gb|AEK39551.1| lysine decarboxylase [Amycolatopsis mediterranei S699]
gi|398315626|gb|AFO74573.1| lysine decarboxylase [Amycolatopsis mediterranei S699]
Length = 261
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 12/77 (15%)
Query: 15 VDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVP 74
V+ R+F ARK I + A + LPGG GTLDE+FE L L+Q +++ ++ PV
Sbjct: 155 VNFRYFFARKTMFIKYS--------QAFICLPGGFGTLDELFEALTLVQTKKV-TKFPV- 204
Query: 75 FLVMNYDSFYKKLLDFL 91
V+ ++ L D++
Sbjct: 205 --VLFGSDYWGGLYDWI 219
>gi|126725466|ref|ZP_01741308.1| hypothetical protein RB2150_04658 [Rhodobacterales bacterium
HTCC2150]
gi|126704670|gb|EBA03761.1| hypothetical protein RB2150_04658 [Rhodobacterales bacterium
HTCC2150]
Length = 194
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A V LPGG G+LDE FEIL QL G P +++N + ++ L+D + D G
Sbjct: 115 AFVVLPGGAGSLDEFFEILTWRQLGLHGK----PIVLVNINGYWDPLIDLVRHIVDQGFA 170
Query: 101 AKDEVASLWKICDSNSEALSYLAE 124
+D S+ I + EAL +
Sbjct: 171 GEDVWQSI-NIATNVDEALEIITN 193
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.138 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,174,844,761
Number of Sequences: 23463169
Number of extensions: 78830451
Number of successful extensions: 188034
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 1735
Number of HSP's that attempted gapping in prelim test: 186615
Number of HSP's gapped (non-prelim): 2819
length of query: 148
length of database: 8,064,228,071
effective HSP length: 111
effective length of query: 37
effective length of database: 9,754,783,608
effective search space: 360926993496
effective search space used: 360926993496
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)