BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032073
(148 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P47044|YJF5_YEAST LOG family protein YJL055W OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YJL055W PE=1 SV=1
Length = 245
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL 91
A VA+PGG GT +E+ E + QL P ++ N D FY KLL+FL
Sbjct: 143 AFVAMPGGYGTFEEIMECITWSQLGIHNK----PIILFNIDGFYDKLLEFL 189
>sp|P46378|FAS6_RHOFA LOG family protein ORF6 in fasciation locus OS=Rhodococcus fascians
GN=fas6 PE=2 SV=1
Length = 198
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 12/78 (15%)
Query: 22 ARKHGLIDCAVRNDSCDRTAV--------VALPGGVGTLDEMFEILALIQLERIGSELPV 73
A HGL + V +D R A+ +ALPGGVGT +E FE+L L
Sbjct: 92 AAHHGLTELHVVHDMHQRKALMAELGDAFIALPGGVGTAEEFFEVLTWSHLGLHNK---- 147
Query: 74 PFLVMNYDSFYKKLLDFL 91
P +++N + +Y+ LL ++
Sbjct: 148 PCVLLNDNEYYRPLLSYI 165
>sp|Q84M85|LOGL5_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOGL5 OS=Oryza sativa subsp. japonica GN=LOGL5 PE=2 SV=1
Length = 246
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL 91
A +ALPGG GTL+E+ E++ QL RI + P ++N D +Y LL F+
Sbjct: 131 AFIALPGGYGTLEELLEVITWAQL-RIHHK---PVGLLNVDGYYDSLLAFI 177
>sp|Q8GW29|LOG7_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7
OS=Arabidopsis thaliana GN=LOG7 PE=1 SV=2
Length = 217
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A +ALPGG GTL+E+ E++ QL P ++N D +Y LL F+ D G +
Sbjct: 107 AFIALPGGYGTLEELLEVITWAQL----GIHRKPVGLLNVDGYYNSLLTFIDKAVDEGFI 162
Query: 101 AKDEVASLWKICDSNSEAL-----SYLAEFYDLSS 130
+ +A + N++ L Y EF +++S
Sbjct: 163 SP--MARRIIVSAPNAKELVRQLEEYEPEFDEITS 195
>sp|Q5BPS0|LOG2_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG2
OS=Arabidopsis thaliana GN=LOG2 PE=1 SV=1
Length = 213
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A +ALPGG GT +E+ E++ QL I ++ P ++N D FY LL F+ D G V
Sbjct: 107 AFIALPGGYGTFEELLEVITWSQL-GIHTK---PVGLLNVDGFYDSLLTFIDKAVDEGFV 162
Query: 101 AKDEVASLWKICDSNSEALSYLAEFY 126
+ A + N+ L L E Y
Sbjct: 163 SS--TARRIIVSAPNAPQLLQLLEEY 186
>sp|Q0JBP5|LOGL6_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOGL6 OS=Oryza sativa subsp. japonica GN=LOGL6 PE=2 SV=1
Length = 250
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL 91
A +ALPGG GTL+E+ E++A QL + PV L N D +Y LL F+
Sbjct: 126 AFIALPGGYGTLEELLEVIAWAQLGI--HDKPVGLL--NVDGYYNSLLSFI 172
>sp|Q851C7|LOGL4_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOG4 OS=Oryza sativa subsp. japonica GN=LOGL4 PE=3 SV=1
Length = 230
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A +ALPGG GT++E+ EI+A QL P ++N D +Y LL + G +
Sbjct: 119 AFIALPGGYGTIEELLEIIAWAQL----GIHNKPVGLLNVDGYYNNLLSLFDKGVEEGFI 174
Query: 101 AKDEVA-SLWKICDSNSEALSYLAE 124
D A +++ + D+ E L+ L E
Sbjct: 175 --DAAARNIFVLADNAGELLTKLTE 197
>sp|B9F166|LOGL2_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOGL2 OS=Oryza sativa subsp. japonica GN=LOGL2 PE=3 SV=1
Length = 244
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL 91
A +ALPGG GTL+E+ E++A QL P ++N D +Y LL F+
Sbjct: 119 AFIALPGGYGTLEELLEVIAWAQL----GIHDKPVGLLNVDGYYNPLLSFI 165
>sp|Q5ZC82|LOG_ORYSJ Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG
OS=Oryza sativa subsp. japonica GN=LOG PE=1 SV=1
Length = 242
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A +ALPGG GTL+E+ E++ QL P ++N D FY L F+ G +
Sbjct: 134 AFIALPGGYGTLEELLEVITWAQL----GIHKKPVGLLNVDGFYDPFLSFIDMAVSEGFI 189
Query: 101 AKD 103
A+D
Sbjct: 190 AED 192
>sp|Q9LFH3|LOG4_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4
OS=Arabidopsis thaliana GN=LOG4 PE=1 SV=1
Length = 215
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A +ALPGG GTL+E+ E++ QL + PV L N D +Y LL F+ + G +
Sbjct: 112 AFIALPGGYGTLEELLEVITWAQLGI--HDKPVGLL--NVDGYYNSLLSFIDKAVEEGFI 167
Query: 101 AKD 103
+ +
Sbjct: 168 STN 170
>sp|Q0DFG8|LOGL8_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOGL8 OS=Oryza sativa subsp. japonica GN=LOGL8 PE=2 SV=3
Length = 266
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL 91
A +ALPGG GTL+E+ E++ QL P ++N D FY LL F+
Sbjct: 156 AFIALPGGYGTLEELLEVITWAQL----GIHKKPVGLLNVDGFYNPLLSFI 202
>sp|Q8LBB7|LOG5_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5
OS=Arabidopsis thaliana GN=LOG5 PE=1 SV=1
Length = 228
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 43 VALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
+ALPGG GTL+E+ E++A QL + PV L N D +Y LL F+ D G +
Sbjct: 109 IALPGGYGTLEELLEVIAWAQLGI--HDKPVGLL--NVDGYYNYLLTFIDKAVDDGFI 162
>sp|Q8L8B8|LOG3_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3
OS=Arabidopsis thaliana GN=LOG3 PE=1 SV=1
Length = 215
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A +ALPGG GTL+E+ E++ QL P ++N D +Y LL F+ + G +
Sbjct: 112 AFIALPGGYGTLEELLEVITWAQL----GIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFI 167
Query: 101 A 101
+
Sbjct: 168 S 168
>sp|Q8H7U8|LOGL3_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOGL3 OS=Oryza sativa subsp. japonica GN=LOGL3 PE=2 SV=1
Length = 211
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 1 MLSPKVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILA 60
+++P+++ + ++ + RK + A ++D A +ALPGG GTL+E+ E++
Sbjct: 80 LMTPEIIGETVGEVRPVSDMHQRK---AEMARQSD-----AFIALPGGYGTLEELLEVIT 131
Query: 61 LIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVA 101
QL P ++N D +Y LL F+ + G ++
Sbjct: 132 WAQL----GIHHKPVGLLNVDGYYNSLLTFIDQAVEEGFIS 168
>sp|Q7XDB8|LOGLA_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOGL10 OS=Oryza sativa subsp. japonica GN=LOGL10 PE=2
SV=1
Length = 204
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL 91
A +ALPGG GTL+E+ E++ QL P ++N D +Y LL F+
Sbjct: 105 AFIALPGGYGTLEELLEVITWAQL----GIHHKPVGLLNVDGYYNSLLTFI 151
>sp|P48636|Y4923_PSEAE LOG family protein PA4923 OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA4923 PE=3
SV=2
Length = 195
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL 91
A +ALPGG+GTL+E+FE+ QL P ++ + FY LL FL
Sbjct: 102 AFIALPGGLGTLEELFEVWTWGQLGYHAK----PLGLLEVNGFYDPLLTFL 148
>sp|B7E7M8|LOGL9_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOGL9 OS=Oryza sativa subsp. japonica GN=LOGL9 PE=2 SV=1
Length = 227
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL 91
A VALPGG GTL+E+ E++A QL I ++ P ++N D +Y LL F+
Sbjct: 145 AFVALPGGYGTLEEVVEVIAWAQLG-IHAK---PVGLLNVDGYYDFLLAFV 191
>sp|Q8RUN2|LOG1_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1
OS=Arabidopsis thaliana GN=LOG1 PE=1 SV=1
Length = 213
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A +ALPGG GTL+E+ E++ QL + PV L N + +Y LL F+ + G +
Sbjct: 106 AFIALPGGYGTLEELLEVITWAQLGI--HDKPVGLL--NVEGYYNSLLSFIDKAVEEGFI 161
Query: 101 A 101
+
Sbjct: 162 S 162
>sp|Q5TKP8|LOGL7_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOGL7 OS=Oryza sativa subsp. japonica GN=LOGL7 PE=2 SV=1
Length = 223
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A +ALPGG GT++E+ E++ QL + PV L N D +Y LL E G +
Sbjct: 115 AFIALPGGYGTMEELLEMITWCQLGI--HDKPVGLL--NVDGYYDPLLALFDKGEAEGFI 170
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDL 128
D ++ + SE L+ + ++ L
Sbjct: 171 NSD-CRQIFVSAPTASELLTKMEQYTRL 197
>sp|Q9LYV8|LOG6_ARATH Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOG6 OS=Arabidopsis thaliana GN=LOG6 PE=3 SV=2
Length = 201
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 100
A + LPGG GTL+E+ E++ QL + PV L N D +Y LL F+ + G +
Sbjct: 117 AFITLPGGYGTLEELLEVITWAQLGI--HDKPVGLL--NVDGYYDALLLFIDKAVEEGFI 172
>sp|Q8LR50|LOGL1_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOGL1 OS=Oryza sativa subsp. japonica GN=LOGL1 PE=2 SV=1
Length = 223
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 41 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLL 88
A +ALPGG GT++E+ E++ QL + PV L N D +Y LL
Sbjct: 117 AFIALPGGYGTMEELLEMITWSQLGI--HDKPVGLL--NVDGYYDPLL 160
>sp|Q1ILN0|MUTL_KORVE DNA mismatch repair protein MutL OS=Koribacter versatilis (strain
Ellin345) GN=mutL PE=3 SV=1
Length = 647
Score = 33.9 bits (76), Expect = 0.39, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 48 GVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVAS 107
G TLD++ + A I+LERIG P P+L N D ++ ++ G+ G ++K E+
Sbjct: 214 GNETLDQLIPLAAQIKLERIGLPKPPPWLRKNEDDEEEQTVE-PGEVRLHGFISKPEIQK 272
Query: 108 L 108
L
Sbjct: 273 L 273
>sp|Q84MC2|LOG8_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8
OS=Arabidopsis thaliana GN=LOG8 PE=1 SV=1
Length = 216
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 12/52 (23%)
Query: 41 AVVALPGGVGTLDEMFEILALIQL----ERIGSELPVPFLVMNYDSFYKKLL 88
A +ALPGG GT++E+ E++ QL + +G ++N D +Y LL
Sbjct: 108 AFIALPGGYGTMEELLEMITWSQLGIHKKTVG--------LLNVDGYYNNLL 151
>sp|O06986|YVDD_BACSU LOG family protein YvdD OS=Bacillus subtilis (strain 168) GN=yvdD
PE=1 SV=1
Length = 191
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 8/64 (12%)
Query: 1 MLSPKVLCKQESQLVDLRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILA 60
+ S +V+ + ++L+++ RK + + A +++PGG GT +E+FE+L
Sbjct: 68 LFSGEVVHQNLTELIEVNGMHERKAKMSELA--------DGFISMPGGFGTYEELFEVLC 119
Query: 61 LIQL 64
Q+
Sbjct: 120 WAQI 123
>sp|Q10Z79|UVRC_TRIEI UvrABC system protein C OS=Trichodesmium erythraeum (strain IMS101)
GN=uvrC PE=3 SV=1
Length = 622
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 101 AKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVHEVNLKSTHG 145
A+ E+ L K+ D N+EA++ LAE DL + R+ ++ G
Sbjct: 377 AEYELLRLAKMSDRNNEAMTDLAEILDLPELPHRIEGYDISHIQG 421
>sp|Q1WSN8|KUP_LACS1 Probable potassium transport system protein kup OS=Lactobacillus
salivarius (strain UCC118) GN=kup PE=3 SV=1
Length = 674
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 83 FYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVHEVNLKS 142
F KL D+L D E+W ++ +D L ++ + + L Y++ L+ +DKR ++V ++
Sbjct: 445 FGNKLRDYLSDEEEWVSL-RDYKDVLQELSNDDRIPL-YISNLVMLTKVDKRTYKVKRET 502
Query: 143 THGIV 147
+ I+
Sbjct: 503 LYSIL 507
>sp|Q894S7|MNMA2_CLOTE tRNA-specific 2-thiouridylase MnmA 2 OS=Clostridium tetani
(strain Massachusetts / E88) GN=mnmA2 PE=3 SV=1
Length = 358
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 60 ALIQLERIGSELPVPFLVMNY-DSFYKKLLDFLGD 93
A+ R+ +++ +PF VMN+ D+F K ++D+ D
Sbjct: 58 AVADARRVANKIGIPFYVMNFKDAFKKNVIDYFVD 92
>sp|Q9XI21|PPR44_ARATH Pentatricopeptide repeat-containing protein At1g15480,
mitochondrial OS=Arabidopsis thaliana GN=At1g15480 PE=2
SV=2
Length = 594
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Query: 102 KDEVASLWKICDSNSEALSYLAEFYDLSSIDK-----RVHEVNLKSTHGIVS 148
+DEV +WKIC+ N LA IDK V E LK +H + S
Sbjct: 382 EDEVRRVWKICEENPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVSS 433
>sp|Q8N8E3|CE112_HUMAN Centrosomal protein of 112 kDa OS=Homo sapiens GN=CEP112 PE=1 SV=2
Length = 955
Score = 29.3 bits (64), Expect = 9.8, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 85 KKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALS 120
KK+ + DC+ +D++A L KIC+ ++E+L+
Sbjct: 317 KKVQTLIRDCQVIRETKEDQIAELKKICEQSTESLN 352
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,055,244
Number of Sequences: 539616
Number of extensions: 1891073
Number of successful extensions: 4464
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 4434
Number of HSP's gapped (non-prelim): 31
length of query: 148
length of database: 191,569,459
effective HSP length: 106
effective length of query: 42
effective length of database: 134,370,163
effective search space: 5643546846
effective search space used: 5643546846
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)