Query 032075
Match_columns 148
No_of_seqs 170 out of 1097
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 14:54:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032075.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032075hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpr_A Ubiquitin-conjugating e 100.0 6.5E-55 2.2E-59 311.9 18.9 148 1-148 4-151 (151)
2 2r0j_A Ubiquitin carrier prote 100.0 5.7E-54 1.9E-58 306.4 17.5 147 2-148 2-148 (149)
3 1z2u_A Ubiquitin-conjugating e 100.0 6.3E-54 2.2E-58 306.5 17.7 147 1-147 4-150 (150)
4 2c2v_B Ubiquitin-conjugating e 100.0 3.6E-54 1.2E-58 308.9 16.3 147 2-148 6-152 (154)
5 1fxt_A Ubiquitin-conjugating e 100.0 2.9E-54 9.8E-59 307.9 15.3 147 1-147 1-149 (149)
6 2ayv_A Ubiquitin-conjugating e 100.0 1.7E-53 5.9E-58 308.6 19.4 146 1-146 21-166 (166)
7 2c4o_A Ubiquitin-conjugating e 100.0 1.7E-53 5.8E-58 308.4 18.9 147 1-147 19-165 (165)
8 1zdn_A Ubiquitin-conjugating e 100.0 2.4E-53 8.4E-58 305.7 17.0 145 2-146 14-158 (158)
9 1ayz_A UBC2, ubiquitin-conjuga 100.0 4.4E-53 1.5E-57 307.2 18.3 146 2-147 5-150 (169)
10 2aak_A UBC1, ubiquitin conjuga 100.0 7E-53 2.4E-57 301.6 18.7 146 2-147 5-150 (152)
11 1jat_A Ubiquitin-conjugating e 100.0 1.6E-53 5.5E-58 305.9 15.3 148 1-148 5-152 (155)
12 1yh2_A HSPC150 protein similar 100.0 1.5E-52 5.1E-57 304.6 19.6 147 2-148 5-155 (169)
13 3h8k_A Ubiquitin-conjugating e 100.0 2.3E-52 8E-57 302.3 19.6 147 2-148 4-164 (164)
14 2bep_A Ubiquitin-conjugating e 100.0 1.8E-52 6.2E-57 301.5 18.7 147 2-148 9-159 (159)
15 2e2c_A Ubiquitin conjugating e 100.0 2.2E-52 7.6E-57 300.2 17.9 145 2-147 10-154 (156)
16 3rcz_B SUMO-conjugating enzyme 100.0 2.4E-52 8.1E-57 301.8 17.8 145 2-146 11-162 (163)
17 3bzh_A Ubiquitin-conjugating e 100.0 7E-52 2.4E-56 306.6 19.3 146 2-147 49-194 (194)
18 2ucz_A UBC7, ubiquitin conjuga 100.0 6E-52 2E-56 300.4 18.4 146 2-147 5-164 (165)
19 2f4z_A Tgtwinscan_2721 - E2 do 100.0 5E-52 1.7E-56 307.0 18.2 147 1-147 32-192 (193)
20 2gjd_A Ubiquitin-conjugating e 100.0 4.4E-52 1.5E-56 298.9 16.9 146 2-147 5-157 (157)
21 3k9o_A Ubiquitin-conjugating e 100.0 8.8E-52 3E-56 308.0 19.1 148 1-148 5-156 (201)
22 2pwq_A Ubiquitin conjugating e 100.0 4.3E-52 1.5E-56 312.0 17.1 147 2-148 24-171 (216)
23 1wzv_A Ubiquitin-conjugating e 100.0 1.1E-51 3.7E-56 296.3 16.8 146 1-147 4-151 (155)
24 2grr_A Ubiquitin-conjugating e 100.0 1.6E-51 5.3E-56 297.2 17.2 147 2-148 8-161 (161)
25 1i7k_A Ubiquitin-conjugating e 100.0 1.3E-51 4.5E-56 301.7 16.3 146 2-148 31-176 (179)
26 1tte_A Ubiquitin-conjugating e 100.0 1.6E-51 5.6E-56 308.6 13.4 148 1-148 2-151 (215)
27 3e46_A Ubiquitin-conjugating e 100.0 1.6E-50 5.4E-55 309.5 18.2 147 2-148 58-208 (253)
28 3fn1_B NEDD8-conjugating enzym 100.0 2.2E-50 7.6E-55 292.7 18.1 145 2-147 15-167 (167)
29 3rz3_A Ubiquitin-conjugating e 100.0 8.7E-50 3E-54 293.3 17.7 145 2-146 8-172 (183)
30 2onu_A Ubiquitin-conjugating e 100.0 7.7E-51 2.6E-55 291.0 11.7 144 2-148 3-148 (152)
31 1c4z_D UBCH7, ubiquitin conjug 100.0 1.1E-50 3.9E-55 290.7 11.4 147 1-148 2-150 (154)
32 1yrv_A Ubiquitin-conjugating l 100.0 5.3E-50 1.8E-54 290.9 15.0 142 2-144 24-168 (169)
33 2awf_A Ubiquitin-conjugating e 100.0 9.6E-50 3.3E-54 290.5 14.8 140 2-141 18-172 (172)
34 2y9m_A Ubiquitin-conjugating e 100.0 7E-49 2.4E-53 285.9 18.1 146 2-147 7-168 (172)
35 2z5d_A Ubiquitin-conjugating e 100.0 7.6E-50 2.6E-54 292.1 13.0 142 2-147 26-169 (179)
36 1y8x_A Ubiquitin-conjugating e 100.0 6.5E-49 2.2E-53 283.1 17.1 140 2-144 7-147 (160)
37 4ddg_A Ubiquitin-conjugating e 100.0 8.8E-49 3E-53 317.6 18.1 148 1-148 3-150 (399)
38 2nvu_C NEDD8-conjugating enzym 100.0 2.4E-48 8.3E-53 284.8 16.7 140 2-144 27-167 (180)
39 1yf9_A Ubiquitin carrier prote 100.0 1.8E-48 6.1E-53 283.4 13.8 142 2-147 13-156 (171)
40 3o2u_A NEDD8-conjugating enzym 100.0 1.8E-47 6E-52 282.3 15.5 141 2-145 30-177 (190)
41 4ds2_A Ubiquitin-conjugating e 100.0 7.1E-46 2.4E-50 269.0 13.1 138 2-139 9-163 (167)
42 3ceg_A Baculoviral IAP repeat- 100.0 1.3E-43 4.3E-48 278.5 14.7 146 2-147 77-243 (323)
43 2q0v_A Ubiquitin-conjugating e 100.0 3.8E-44 1.3E-48 257.0 10.5 128 2-130 22-156 (156)
44 2fo3_A Ubiquitin-conjugating e 100.0 3.9E-43 1.3E-47 243.7 13.3 116 2-117 7-123 (125)
45 2h2y_A Ubiquitin-conjugating e 100.0 3.4E-42 1.1E-46 242.0 14.6 114 2-115 21-135 (136)
46 2a4d_A Ubiquitin-conjugating e 100.0 2.5E-42 8.6E-47 248.2 13.3 123 2-124 26-156 (160)
47 1jat_B Ubiquitin-conjugating e 100.0 3.4E-43 1.2E-47 247.7 7.2 125 2-127 7-138 (138)
48 2hlw_A Ubiquitin-conjugating e 100.0 9.3E-42 3.2E-46 247.6 9.9 123 2-124 36-166 (170)
49 2a7l_A Hypothetical ubiquitin- 100.0 7.8E-41 2.7E-45 234.9 12.6 109 3-111 24-136 (136)
50 2f4w_A Ubiquitin-conjugating e 100.0 1.7E-39 5.8E-44 239.1 15.7 135 1-137 14-154 (187)
51 1zuo_A Hypothetical protein LO 100.0 3.1E-40 1.1E-44 242.8 5.6 137 2-146 28-181 (186)
52 2z6o_A UFM1-conjugating enzyme 100.0 1.1E-29 3.9E-34 180.8 2.6 96 3-104 34-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 2.7E-21 9.1E-26 138.6 8.6 113 4-117 31-161 (162)
54 3kpa_A Probable ubiquitin fold 99.8 1.1E-21 3.6E-26 137.0 0.8 95 3-103 36-145 (168)
55 3obq_A Tumor susceptibility ge 99.6 1.8E-15 6.3E-20 106.5 6.8 102 5-112 24-138 (146)
56 2ebm_A RWD domain-containing p 97.2 0.0055 1.9E-07 41.2 10.0 66 4-71 13-78 (128)
57 2day_A Ring finger protein 25; 96.7 0.016 5.6E-07 38.8 8.9 68 5-72 12-83 (128)
58 2yz0_A Serine/threonine-protei 96.4 0.034 1.2E-06 37.8 9.2 66 5-71 14-85 (138)
59 3zqs_A E3 ubiquitin-protein li 95.5 0.22 7.5E-06 35.9 10.5 85 4-112 4-88 (186)
60 2ebk_A RWD domain-containing p 95.5 0.07 2.4E-06 35.7 7.5 65 5-70 11-78 (128)
61 2daw_A RWD domain containing p 95.1 0.22 7.5E-06 34.6 9.2 23 49-71 76-98 (154)
62 1ukx_A GCN2, GCN2 EIF2alpha ki 95.0 0.15 5.1E-06 34.3 7.9 67 4-71 13-86 (137)
63 2dax_A Protein C21ORF6; RWD do 93.4 0.26 8.8E-06 33.9 6.5 24 49-72 74-97 (152)
64 2cwb_A Chimera of immunoglobul 86.9 0.12 4.2E-06 34.0 0.0 34 113-146 21-54 (108)
65 3u3c_B Paxillin LD2 peptide; 4 77.5 1.8 6.2E-05 20.2 2.0 19 3-21 7-25 (26)
66 3rls_A YAF9, protein AF-9 homo 34.7 99 0.0034 21.7 5.6 43 28-72 30-72 (175)
67 1h3o_B Transcription initiatio 29.6 72 0.0025 19.2 3.7 41 106-146 11-51 (76)
68 2bum_A Protocatechuate 3,4-dio 28.9 53 0.0018 23.7 3.5 25 46-70 109-138 (209)
69 2f4m_B UV excision repair prot 27.2 64 0.0022 18.5 3.0 20 119-138 37-56 (61)
70 3s7v_A Major capsid protein VP 27.1 1.2E+02 0.0042 22.7 5.2 40 44-86 198-239 (277)
71 1pve_A HHR23B, UV excision rep 25.4 65 0.0022 19.2 2.9 21 119-139 39-59 (72)
72 3qrl_A Transcription initiatio 24.8 1.6E+02 0.0056 19.8 5.6 43 30-74 32-77 (140)
73 3g9r_A Fusion complex of HIV-1 23.8 52 0.0018 17.2 1.9 13 3-15 30-42 (42)
74 2jrw_A Cyclic extended PEP.1; 22.2 22 0.00075 16.4 0.2 14 63-76 6-19 (26)
75 1sid_A Polyomavirus coat prote 22.1 1.5E+02 0.0051 23.3 5.0 24 63-86 249-274 (383)
76 1vps_A Polyomavirus VP1 pentam 21.5 1.9E+02 0.0064 21.8 5.3 40 44-86 202-243 (289)
77 3rco_A Tudor domain-containing 20.9 54 0.0018 20.4 1.9 19 2-20 30-48 (89)
78 3nxg_A Major capsid protein VP 20.2 1.2E+02 0.0041 22.7 4.0 44 40-86 185-230 (272)
No 1
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=6.5e-55 Score=311.90 Aligned_cols=148 Identities=65% Similarity=1.218 Sum_probs=145.6
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeC
Q 032075 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (148)
+|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||||+.
T Consensus 4 ~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 83 (151)
T 4gpr_A 4 MAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINK 83 (151)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECC
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhCC
Q 032075 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 148 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+|.||+++|.++|+|+++|.+||.+|+++|.+||+++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~p 151 (151)
T 4gpr_A 84 NGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYARP 151 (151)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCCC
T ss_pred CCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999985
No 2
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=5.7e-54 Score=306.38 Aligned_cols=147 Identities=47% Similarity=0.900 Sum_probs=144.2
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeCC
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (148)
+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||||+.+
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhCC
Q 032075 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 148 (148)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 82 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CEEechhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999975
No 3
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=6.3e-54 Score=306.46 Aligned_cols=147 Identities=80% Similarity=1.409 Sum_probs=144.4
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeC
Q 032075 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (148)
+|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||||+.
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 83 (150)
T 1z2u_A 4 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 83 (150)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhC
Q 032075 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 147 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 84 NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999996
No 4
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.6e-54 Score=308.91 Aligned_cols=147 Identities=46% Similarity=0.867 Sum_probs=142.4
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeCC
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (148)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||||+.+
T Consensus 6 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 85 (154)
T 2c2v_B 6 LPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL 85 (154)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCccC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhCC
Q 032075 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 148 (148)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 86 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~~ 152 (154)
T 2c2v_B 86 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMN 152 (154)
T ss_dssp CBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999974
No 5
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=2.9e-54 Score=307.93 Aligned_cols=147 Identities=48% Similarity=0.929 Sum_probs=144.2
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCC-CcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceee
Q 032075 1 MASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~-n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 79 (148)
||.+||++|+++|++++++|+++.+.++ |+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||||+
T Consensus 1 ~~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~ 80 (149)
T 1fxt_A 1 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 80 (149)
T ss_dssp CCHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred ChHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCc
Confidence 6899999999999999999999999987 999999999999999999999999999999999999999999999999999
Q ss_pred C-CCceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhC
Q 032075 80 S-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 147 (148)
Q Consensus 80 ~-~G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
. +|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 81 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 81 SVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp SSSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 8 9999999999999999999999999999999999999999999999999999999999999999996
No 6
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-53 Score=308.56 Aligned_cols=146 Identities=79% Similarity=1.375 Sum_probs=143.7
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeC
Q 032075 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (148)
+|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++|||||+.
T Consensus 21 ~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~ 100 (166)
T 2ayv_A 21 GALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINS 100 (166)
T ss_dssp THHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhh
Q 032075 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYA 146 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a 146 (148)
+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||
T Consensus 101 ~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 101 QGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999997
No 7
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.7e-53 Score=308.38 Aligned_cols=147 Identities=81% Similarity=1.399 Sum_probs=144.3
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeC
Q 032075 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (148)
+|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||||+.
T Consensus 19 ~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~ 98 (165)
T 2c4o_A 19 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 98 (165)
T ss_dssp HHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCC
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhC
Q 032075 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 147 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 99 ~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 99 NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred CCeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999996
No 8
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.4e-53 Score=305.74 Aligned_cols=145 Identities=39% Similarity=0.701 Sum_probs=142.9
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeCC
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (148)
|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||||+.+
T Consensus 14 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 93 (158)
T 1zdn_A 14 IIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGAN 93 (158)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhh
Q 032075 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYA 146 (148)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a 146 (148)
|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||
T Consensus 94 G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 94 GEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp SBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999998
No 9
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=4.4e-53 Score=307.25 Aligned_cols=146 Identities=38% Similarity=0.830 Sum_probs=143.7
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeCC
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (148)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++|||||+.+
T Consensus 5 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~ 84 (169)
T 1ayz_A 5 ARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYAN 84 (169)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhC
Q 032075 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 147 (148)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 85 G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~ 150 (169)
T 1ayz_A 85 GEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150 (169)
T ss_dssp SBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999999999985
No 10
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=7e-53 Score=301.64 Aligned_cols=146 Identities=44% Similarity=0.884 Sum_probs=143.7
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeCC
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (148)
|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||||+.+
T Consensus 5 a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 84 (152)
T 2aak_A 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYAD 84 (152)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhC
Q 032075 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 147 (148)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 85 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 150 (152)
T 2aak_A 85 GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWT 150 (152)
T ss_dssp SBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999999999999999999999999999999999996
No 11
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=1.6e-53 Score=305.86 Aligned_cols=148 Identities=45% Similarity=0.822 Sum_probs=144.6
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeC
Q 032075 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (148)
+|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 ~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 84 (155)
T 1jat_A 5 SLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDR 84 (155)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCC
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhCC
Q 032075 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 148 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 85 ~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~ 152 (155)
T 1jat_A 85 LGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKK 152 (155)
T ss_dssp TCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEE
T ss_pred CCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999963
No 12
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-52 Score=304.61 Aligned_cols=147 Identities=40% Similarity=0.803 Sum_probs=144.1
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeCC
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (148)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++|||||+.+
T Consensus 5 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~ 84 (169)
T 1yh2_A 5 RASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSA 84 (169)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCcC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeccCCC----CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhCC
Q 032075 82 GSICLDILK----EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 148 (148)
Q Consensus 82 G~icl~~l~----~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 85 G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 155 (169)
T 1yh2_A 85 GRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQ 155 (169)
T ss_dssp CBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHccc
Confidence 999999998 8999999999999999999999999999999999999999999999999999999974
No 13
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=2.3e-52 Score=302.29 Aligned_cols=147 Identities=40% Similarity=0.800 Sum_probs=143.1
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCC-CcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeC
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~-n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (148)
|.|||++|+++|+++++.|+++.+.++ |+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||||+.
T Consensus 4 a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~ 83 (164)
T 3h8k_A 4 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYP 83 (164)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCC
Confidence 789999999999999999999999876 9999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccCCC-------------CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhC
Q 032075 81 NGSICLDILK-------------EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 147 (148)
Q Consensus 81 ~G~icl~~l~-------------~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++|. ++|+|++||.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 84 ~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~s~~ 163 (164)
T 3h8k_A 84 DGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKSLG 163 (164)
T ss_dssp TSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHT
T ss_pred CCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 9999999996 789999999999999999999999999999999999999999999999999999986
Q ss_pred C
Q 032075 148 G 148 (148)
Q Consensus 148 ~ 148 (148)
+
T Consensus 164 ~ 164 (164)
T 3h8k_A 164 L 164 (164)
T ss_dssp C
T ss_pred C
Confidence 3
No 14
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=1.8e-52 Score=301.50 Aligned_cols=147 Identities=44% Similarity=0.824 Sum_probs=142.9
Q ss_pred hHHHHHHHHHHhhcC---CCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeecccccee
Q 032075 2 ASKRILKELKDLQKD---PPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNI 78 (148)
Q Consensus 2 a~~RL~~E~~~l~~~---~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv 78 (148)
|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||||
T Consensus 9 a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni 88 (159)
T 2bep_A 9 AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNI 88 (159)
T ss_dssp HHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCC
Confidence 679999999999985 58899999999999999999999999999999999999999999999999999999999999
Q ss_pred e-CCCceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhCC
Q 032075 79 N-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 148 (148)
Q Consensus 79 ~-~~G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+ .+|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+|
T Consensus 89 ~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 159 (159)
T 2bep_A 89 SSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 159 (159)
T ss_dssp CTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhcC
Confidence 9 499999999999999999999999999999999999999999999999999999999999999999986
No 15
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-52 Score=300.18 Aligned_cols=145 Identities=37% Similarity=0.734 Sum_probs=142.2
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeCC
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (148)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||||+.+
T Consensus 10 ~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 89 (156)
T 2e2c_A 10 VSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQS 89 (156)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCccC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhC
Q 032075 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 147 (148)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| +|+++|.++||+|+++||.
T Consensus 90 G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~ 154 (156)
T 2e2c_A 90 GNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQS 154 (156)
T ss_dssp CBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred ceEECccccccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999 8999999999999999984
No 16
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=2.4e-52 Score=301.78 Aligned_cols=145 Identities=38% Similarity=0.787 Sum_probs=141.6
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCC-----CcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccc
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 76 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~-----n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hp 76 (148)
|.+||++|+++|+++++.|+++.|.++ |+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||
T Consensus 11 ~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HP 90 (163)
T 3rcz_B 11 CKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHP 90 (163)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccC
Confidence 789999999999999999999999876 999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCceeccCCCC--CCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhh
Q 032075 77 NINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYA 146 (148)
Q Consensus 77 nv~~~G~icl~~l~~--~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a 146 (148)
||+.+|.||+++|.. +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||
T Consensus 91 nV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya 162 (163)
T 3rcz_B 91 NVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENA 162 (163)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred CCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999999999999975 4999999999999999999999999999999999999999999999999999998
No 17
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=7e-52 Score=306.56 Aligned_cols=146 Identities=62% Similarity=1.155 Sum_probs=143.8
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeCC
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (148)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|.|++|||||+.+
T Consensus 49 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~ 128 (194)
T 3bzh_A 49 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQ 128 (194)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhC
Q 032075 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 147 (148)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++|++|+++||+
T Consensus 129 G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 129 GVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp CBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CceechhhhccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999999999999999996
No 18
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=6e-52 Score=300.42 Aligned_cols=146 Identities=41% Similarity=0.841 Sum_probs=142.0
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecC-CCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeC
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVA-EDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~-~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (148)
|.+||++|+++|++++++|+++.+.+ +|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++|||||+.
T Consensus 5 a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~ 84 (165)
T 2ucz_A 5 AQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYP 84 (165)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCC
Confidence 68999999999999999999999986 69999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccCC-------------CCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhC
Q 032075 81 NGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 147 (148)
Q Consensus 81 ~G~icl~~l-------------~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++| .++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 85 ~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~~~~~~ 164 (165)
T 2ucz_A 85 NGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSILKSLG 164 (165)
T ss_dssp TSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHHHHHTT
T ss_pred CCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHhh
Confidence 999999999 6899999999999999999999999999999999999999999999999999999874
No 19
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=5e-52 Score=307.01 Aligned_cols=147 Identities=47% Similarity=0.865 Sum_probs=140.8
Q ss_pred ChHHHHHHHHHHhhcCCC-------------CCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCee
Q 032075 1 MASKRILKELKDLQKDPP-------------TSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKV 67 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~-------------~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v 67 (148)
+|.+||++|+++|+++++ .|+++.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|
T Consensus 32 ~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V 111 (193)
T 2f4z_A 32 REQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKM 111 (193)
T ss_dssp CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeE
Confidence 378999999999999876 7999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccceee-CCCceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhh
Q 032075 68 AFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYA 146 (148)
Q Consensus 68 ~f~t~i~Hpnv~-~~G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a 146 (148)
+|.|+||||||+ .+|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+|+++||
T Consensus 112 ~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~ya 191 (193)
T 2f4z_A 112 KFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETFA 191 (193)
T ss_dssp EESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred EEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHc
Confidence 999999999999 5999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C
Q 032075 147 M 147 (148)
Q Consensus 147 ~ 147 (148)
+
T Consensus 192 ~ 192 (193)
T 2f4z_A 192 K 192 (193)
T ss_dssp C
T ss_pred c
Confidence 7
No 20
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=4.4e-52 Score=298.91 Aligned_cols=146 Identities=35% Similarity=0.737 Sum_probs=141.8
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecC-----CCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccc
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVA-----EDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 76 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~-----~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hp 76 (148)
|.+||++|+++|+++++.|+++.|.. +|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||
T Consensus 5 a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 84 (157)
T 2gjd_A 5 CLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHP 84 (157)
T ss_dssp HHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCccC
Confidence 68999999999999999999999875 3899999999999999999999999999999999999999999999999
Q ss_pred eeeCCCceeccCCCC--CCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhC
Q 032075 77 NINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 147 (148)
Q Consensus 77 nv~~~G~icl~~l~~--~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
||+.+|.||+++|.. +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 85 nv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 85 NVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred CCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999999999976 79999999999999999999999999999999999999999999999999999996
No 21
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=8.8e-52 Score=308.00 Aligned_cols=148 Identities=44% Similarity=0.831 Sum_probs=143.4
Q ss_pred ChHHHHHHHHHHhhcC---CCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccce
Q 032075 1 MASKRILKELKDLQKD---PPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN 77 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~---~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 77 (148)
+|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++||||
T Consensus 5 ~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 84 (201)
T 3k9o_A 5 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPN 84 (201)
T ss_dssp TTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCC
Confidence 4789999999999987 3789999999999999999999999999999999999999999999999999999999999
Q ss_pred eeC-CCceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhCC
Q 032075 78 INS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 148 (148)
Q Consensus 78 v~~-~G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
|+. +|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 85 v~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 156 (201)
T 3k9o_A 85 ISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 156 (201)
T ss_dssp BCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred CcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 994 99999999999999999999999999999999999999999999999999999999999999999974
No 22
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=4.3e-52 Score=312.01 Aligned_cols=147 Identities=47% Similarity=0.903 Sum_probs=143.9
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceee-C
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-S 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~-~ 80 (148)
|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|+||||||+ .
T Consensus 24 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~ 103 (216)
T 2pwq_A 24 ELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQ 103 (216)
T ss_dssp HHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCC
Confidence 689999999999999999999999999999999999999999999999999999999999999999999999999999 5
Q ss_pred CCceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhCC
Q 032075 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 148 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 104 ~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~ 171 (216)
T 2pwq_A 104 TGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFATG 171 (216)
T ss_dssp TCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999974
No 23
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=1.1e-51 Score=296.35 Aligned_cols=146 Identities=37% Similarity=0.784 Sum_probs=142.2
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeE-eecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceee
Q 032075 1 MASKRILKELKDLQKDPPTSCSA-GPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~-~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 79 (148)
+|.+||++|+++|+++++.|+++ .+.++|+++|+++|. |++|||+||.|++.|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 37899999999999999999999 788899999999999 9999999999999999999999999999999999999999
Q ss_pred CCCceeccCC-CCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhC
Q 032075 80 SNGSICLDIL-KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 147 (148)
Q Consensus 80 ~~G~icl~~l-~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
.+|.||+++| .++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 83 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~ 151 (155)
T 1wzv_A 83 ENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGV 151 (155)
T ss_dssp TTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCE
T ss_pred CCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999 8999999999999999999999999999999999999999999999999999999996
No 24
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=1.6e-51 Score=297.15 Aligned_cols=147 Identities=37% Similarity=0.745 Sum_probs=141.6
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecC-----CCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccc
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVA-----EDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 76 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~-----~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hp 76 (148)
|.+||++|+++|+++++.|+.+.+.. +|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||
T Consensus 8 a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 87 (161)
T 2grr_A 8 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHP 87 (161)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcccC
Confidence 67999999999999999999998874 5899999999999999999999999999999999999999999999999
Q ss_pred eeeCCCceeccCCCC--CCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhCC
Q 032075 77 NINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 148 (148)
Q Consensus 77 nv~~~G~icl~~l~~--~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
||+.+|.||+++|.. +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 88 nv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 161 (161)
T 2grr_A 88 NVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 161 (161)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC-
T ss_pred CCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Confidence 999999999999975 899999999999999999999999999999999999999999999999999999975
No 25
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-51 Score=301.69 Aligned_cols=146 Identities=34% Similarity=0.632 Sum_probs=142.5
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeCC
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (148)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|.|++|||||+.+
T Consensus 31 ~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~ 110 (179)
T 1i7k_A 31 VGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQ 110 (179)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCccccC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhCC
Q 032075 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 148 (148)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++| +|+++|.++|++++++++++
T Consensus 111 G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~~ 176 (179)
T 1i7k_A 111 GNISLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVTS 176 (179)
T ss_dssp CBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC-
T ss_pred CeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999 99999999999999999864
No 26
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=1.6e-51 Score=308.65 Aligned_cols=148 Identities=46% Similarity=0.911 Sum_probs=143.2
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCC-cceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceee
Q 032075 1 MASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n-~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 79 (148)
+|.+||++|+++|++++++|+++.+.++| +++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 47899999999999999999999998874 66999999999999999999999999999999999999999999999999
Q ss_pred C-CCceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhCC
Q 032075 80 S-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 148 (148)
Q Consensus 80 ~-~G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
. +|.||+++|.++|+|++||.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 82 ~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~~ 151 (215)
T 1tte_A 82 SVTGAICLDILRNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASE 151 (215)
T ss_dssp SSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSCC
T ss_pred CCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 8 99999999999999999999999999999999999999999999999999999999999999999964
No 27
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=1.6e-50 Score=309.51 Aligned_cols=147 Identities=44% Similarity=0.824 Sum_probs=142.9
Q ss_pred hHHHHHHHHHHhhcC---CCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeecccccee
Q 032075 2 ASKRILKELKDLQKD---PPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNI 78 (148)
Q Consensus 2 a~~RL~~E~~~l~~~---~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv 78 (148)
|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|+||||||
T Consensus 58 a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 137 (253)
T 3e46_A 58 AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNI 137 (253)
T ss_dssp HHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCc
Confidence 689999999999987 47899999999999999999999999999999999999999999999999999999999999
Q ss_pred e-CCCceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhCC
Q 032075 79 N-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 148 (148)
Q Consensus 79 ~-~~G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+ .+|.||+++|.++|+|+++|.+||.+|+++|.+||+++|+|.+||++|++|+++|.++|++|+++||++
T Consensus 138 ~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~ 208 (253)
T 3e46_A 138 SSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 208 (253)
T ss_dssp CTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 9 499999999999999999999999999999999999999999999999999999999999999999974
No 28
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=2.2e-50 Score=292.70 Aligned_cols=145 Identities=34% Similarity=0.638 Sum_probs=139.4
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeec-CCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeC
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPV-AEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~-~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (148)
+.+||++|+++|+++++.|+++.+. ++|++.|+++| ||++|||+||.|++.|.||++||++||+|+|.|++|||||+.
T Consensus 15 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 93 (167)
T 3fn1_B 15 RDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITE 93 (167)
T ss_dssp HHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCC
Confidence 6799999999999999999999865 57899999998 899999999999999999999999999999999999999999
Q ss_pred CCceeccCCCC------CCCCcCCHHHHHHHHHHhhcC-CCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhC
Q 032075 81 NGSICLDILKE------QWSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 147 (148)
Q Consensus 81 ~G~icl~~l~~------~W~p~~~i~~il~~l~~ll~~-p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++|.. +|+|+++|.+||.+|+++|.+ ||+++|+|.|||++|++|+++|.++||+|+++||+
T Consensus 94 ~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 94 TGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp TCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999975 799999999999999999999 69999999999999999999999999999999996
No 29
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=8.7e-50 Score=293.31 Aligned_cols=145 Identities=36% Similarity=0.750 Sum_probs=139.6
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEe-ecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeC
Q 032075 2 ASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~-~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (148)
|.|||++|+++|+++++.|+++. +.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||||++
T Consensus 8 a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~ 87 (183)
T 3rz3_A 8 SQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYE 87 (183)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCC
Confidence 67999999999999999999999 66789999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccCCC-------------CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhh------CHHHHHHHHHHH
Q 032075 81 NGSICLDILK-------------EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT------DRSKYETTARSW 141 (148)
Q Consensus 81 ~G~icl~~l~-------------~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~------~~~~f~~~~~~~ 141 (148)
+|.||+++|. ++|+|+++|.+||.+|++||.+||+++|+|.+||++|++ |+++|.++++++
T Consensus 88 ~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~~v~~~ 167 (183)
T 3rz3_A 88 TGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQ 167 (183)
T ss_dssp TSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred CCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHHHHHHH
Confidence 9999999996 889999999999999999999999999999999999998 789999999999
Q ss_pred HHHhh
Q 032075 142 TQKYA 146 (148)
Q Consensus 142 ~~~~a 146 (148)
+++++
T Consensus 168 v~~s~ 172 (183)
T 3rz3_A 168 VLGTK 172 (183)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99885
No 30
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=7.7e-51 Score=290.96 Aligned_cols=144 Identities=29% Similarity=0.639 Sum_probs=138.2
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceee-C
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-S 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~-~ 80 (148)
|.+||++|+++|++. |+++.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||||+ .
T Consensus 3 a~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~ 79 (152)
T 2onu_A 3 SLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEA 79 (152)
T ss_dssp CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCc
Confidence 679999999999874 788889999999999999999999999999999999999999999999999999999999 4
Q ss_pred CCceeccCCCCCCCCcCCHHHHHHH-HHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhCC
Q 032075 81 NGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 148 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~-l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+|.||+++|.++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 80 ~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~ 148 (152)
T 2onu_A 80 SGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASK 148 (152)
T ss_dssp TCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCG
T ss_pred CCeEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999 6899999999999999999999999999999999999999973
No 31
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=1.1e-50 Score=290.74 Aligned_cols=147 Identities=38% Similarity=0.831 Sum_probs=137.2
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEee-cCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceee
Q 032075 1 MASKRILKELKDLQKDPPTSCSAGP-VAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~-~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 79 (148)
+|.+||++|+++|+++++.|+.+.+ .++|+++|+++|. |++|||+||.|++.|.||++||++||+|+|.|++|||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 80 (154)
T 1c4z_D 2 AASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNID 80 (154)
T ss_dssp --CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred cHHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCC
Confidence 3779999999999999999998654 5679999999998 9999999999999999999999999999999999999999
Q ss_pred CCCceeccCCC-CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhCC
Q 032075 80 SNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 148 (148)
Q Consensus 80 ~~G~icl~~l~-~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
.+|.||+++|. ++|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 81 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (154)
T 1c4z_D 81 EKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEK 150 (154)
T ss_dssp TTCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC---
T ss_pred CCCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhccc
Confidence 99999999996 8999999999999999999999999999999999999999999999999999999963
No 32
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.3e-50 Score=290.93 Aligned_cols=142 Identities=35% Similarity=0.643 Sum_probs=137.3
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeecccccee-eC
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNI-NS 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv-~~ 80 (148)
|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++||||| +.
T Consensus 24 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~ 103 (169)
T 1yrv_A 24 AYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPH 103 (169)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999 68
Q ss_pred CCceeccCCC--CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHH
Q 032075 81 NGSICLDILK--EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQK 144 (148)
Q Consensus 81 ~G~icl~~l~--~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~ 144 (148)
+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++ ++++++
T Consensus 104 ~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 104 TGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp TCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred CCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 9999999998 89999999999999999999999999999999999999999999999 888764
No 33
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=9.6e-50 Score=290.45 Aligned_cols=140 Identities=38% Similarity=0.860 Sum_probs=108.8
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecC-CCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeC
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVA-EDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~-~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (148)
|.+||++|+++|+++++.|+++.+.+ +|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++|||||+.
T Consensus 18 ~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~~ 97 (172)
T 2awf_A 18 GSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDK 97 (172)
T ss_dssp THHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCCC
Confidence 78999999999999999999999876 69999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccCCC-------------CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHH-HHHHHHHHH
Q 032075 81 NGSICLDILK-------------EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRS-KYETTARSW 141 (148)
Q Consensus 81 ~G~icl~~l~-------------~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~-~f~~~~~~~ 141 (148)
+|.||+++|. ++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|++ +|.++||+|
T Consensus 98 ~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 98 NGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp TCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-----------------------------
T ss_pred CCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 9999999996 689999999999999999999999999999999999999999 999999975
No 34
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=7e-49 Score=285.94 Aligned_cols=146 Identities=34% Similarity=0.662 Sum_probs=137.3
Q ss_pred hHHHHHHHHHHhhc-C-C------CC---CeeEee-cCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEE
Q 032075 2 ASKRILKELKDLQK-D-P------PT---SCSAGP-VAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAF 69 (148)
Q Consensus 2 a~~RL~~E~~~l~~-~-~------~~---~~~~~~-~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f 69 (148)
|.+||++|+++|++ + + +. ++.+.+ .++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|
T Consensus 7 ~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f 86 (172)
T 2y9m_A 7 CMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISF 86 (172)
T ss_dssp HHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred HHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEE
Confidence 67999999999998 4 3 33 466778 67899999999999999999999999999999999999999999
Q ss_pred ee-ccccceee-CCCceeccCCC-CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhh-CHHHHHHHHHHHHHHh
Q 032075 70 RT-KVFHPNIN-SNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT-DRSKYETTARSWTQKY 145 (148)
Q Consensus 70 ~t-~i~Hpnv~-~~G~icl~~l~-~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~-~~~~f~~~~~~~~~~~ 145 (148)
.| ++|||||+ .+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++ |+++|.++||+|++++
T Consensus 87 ~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~~~~~~ 166 (172)
T 2y9m_A 87 MQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKYFLAER 166 (172)
T ss_dssp CTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred eeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99 99999997 79999999998 899999999999999999999999999999999999999 9999999999999998
Q ss_pred hC
Q 032075 146 AM 147 (148)
Q Consensus 146 a~ 147 (148)
+.
T Consensus 167 ~~ 168 (172)
T 2y9m_A 167 ER 168 (172)
T ss_dssp HC
T ss_pred Hh
Confidence 74
No 35
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.6e-50 Score=292.11 Aligned_cols=142 Identities=32% Similarity=0.708 Sum_probs=136.7
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeC-
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS- 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~- 80 (148)
|.+||++|+++|++ +|+++.+. +|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||||+.
T Consensus 26 a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~ 101 (179)
T 2z5d_A 26 GKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEA 101 (179)
T ss_dssp HHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCC
Confidence 57999999999985 57888887 67999999999999999999999999999999999999999999999999998
Q ss_pred CCceeccCCCCCCCCcCCHHHHHHH-HHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhC
Q 032075 81 NGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 147 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~-l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 102 ~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~ 169 (179)
T 2z5d_A 102 SGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 169 (179)
T ss_dssp TCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSS
T ss_pred CCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999999 999999999999999999999999999999999999999996
No 36
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.5e-49 Score=283.11 Aligned_cols=140 Identities=34% Similarity=0.726 Sum_probs=135.2
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEe-ecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeC
Q 032075 2 ASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~-~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (148)
|.+||++|+++| ++++|+++. +.++|+++|+++| ||++|||+||.|++.|.||++||++||+|+|.|++|||||+.
T Consensus 7 ~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 83 (160)
T 1y8x_A 7 AQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL 83 (160)
T ss_dssp HHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCC
Confidence 789999999999 467899998 7889999999998 999999999999999999999999999999999999999999
Q ss_pred CCceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHH
Q 032075 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQK 144 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~ 144 (148)
+|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||++++.
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 84 EGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHS
T ss_pred CCeEEcccchhhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999874
No 37
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=8.8e-49 Score=317.57 Aligned_cols=148 Identities=80% Similarity=1.379 Sum_probs=145.5
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeC
Q 032075 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (148)
||.|||++|+++|++++++|+++.|.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||||++
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 82 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 82 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhCC
Q 032075 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 148 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+|.||+++|.++|+|++++.+||.+|+++|.+||+++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 83 ~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~ 150 (399)
T 4ddg_A 83 NGSISLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMG 150 (399)
T ss_dssp TCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSC
T ss_pred CCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999974
No 38
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.4e-48 Score=284.77 Aligned_cols=140 Identities=33% Similarity=0.700 Sum_probs=135.3
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEe-ecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeC
Q 032075 2 ASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~-~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (148)
|.+||++|+++| ++++|+++. +.++|+++|+++| ||++|||+||.|++.|.||++||++||+|+|.|++|||||+.
T Consensus 27 ~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~ 103 (180)
T 2nvu_C 27 AQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL 103 (180)
T ss_dssp HHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCC
Confidence 679999999999 477899998 7889999999998 999999999999999999999999999999999999999999
Q ss_pred CCceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHH
Q 032075 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQK 144 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~ 144 (148)
+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++|++|++.
T Consensus 104 ~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~ 167 (180)
T 2nvu_C 104 EGNVALNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 167 (180)
T ss_dssp TSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred CCcEEcccccccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999874
No 39
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-48 Score=283.40 Aligned_cols=142 Identities=27% Similarity=0.647 Sum_probs=134.9
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceee-C
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-S 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~-~ 80 (148)
|.+||++|+++|++++. + + +.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||||+ .
T Consensus 13 ~~~RL~~El~~l~~~~~-~--v-~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~ 88 (171)
T 1yf9_A 13 SNRRREMDYMRLCNSTR-K--V-YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDER 88 (171)
T ss_dssp CCHHHHHHHHHHHSSSS-C--E-EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCC-C--C-CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCccc
Confidence 46999999999999874 3 3 3578999999999999999999999999999999999999999999999999999 5
Q ss_pred CCceeccCCCCCCCCcCCHHHHHHHH-HHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhhC
Q 032075 81 NGSICLDILKEQWSPALTISKVLLSI-CSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 147 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l-~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++|.++|+|+++|.+||.+| ++||.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 89 ~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~ 156 (171)
T 1yf9_A 89 SGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHAT 156 (171)
T ss_dssp TCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999997 79999999999999999999999999999999999999986
No 40
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=1.8e-47 Score=282.32 Aligned_cols=141 Identities=30% Similarity=0.611 Sum_probs=135.8
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEe----ecCCCcc---eEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccc
Q 032075 2 ASKRILKELKDLQKDPPTSCSAG----PVAEDMF---HWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVF 74 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~----~~~~n~~---~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~ 74 (148)
|.+||++|+++|+ +++++++. +.++|++ +|+++|. |++|||+||.|++.|.||++||++||+|+|.|++|
T Consensus 30 a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 106 (190)
T 3o2u_A 30 ARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIF 106 (190)
T ss_dssp HHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred HHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcc
Confidence 6899999999999 77899998 7889999 9999997 88899999999999999999999999999999999
Q ss_pred cceeeCCCceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHh
Q 032075 75 HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKY 145 (148)
Q Consensus 75 Hpnv~~~G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~ 145 (148)
||||+.+|.||+++|.++|+|+++|.+||.+|+++|.+||+++|+|.+||++|++|+++|.++||+|++..
T Consensus 107 HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~ 177 (190)
T 3o2u_A 107 HPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGG 177 (190)
T ss_dssp CTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTC
T ss_pred cCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999754
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=7.1e-46 Score=268.97 Aligned_cols=138 Identities=28% Similarity=0.601 Sum_probs=130.7
Q ss_pred hHHHHHHHHHHhhcCC------------CCCeeEeecCCCcceEEEEEeCCCCCCCC--CCEEEEEEEcCCCCCCCCCee
Q 032075 2 ASKRILKELKDLQKDP------------PTSCSAGPVAEDMFHWQATIMGPPDSPYA--GGVFLVTIHFPPDYPFKPPKV 67 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~------------~~~~~~~~~~~n~~~w~~~i~gp~~t~y~--g~~f~~~i~fp~~YP~~pP~v 67 (148)
|.|||++|+++|++++ ..++.+.+.++|+++|+++|.||++|||+ ||.|++.|.||++||++||+|
T Consensus 9 a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v 88 (167)
T 4ds2_A 9 SNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTV 88 (167)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEE
Confidence 6799999999999976 78899999999999999999999999999 999999999999999999999
Q ss_pred EEeeccccceeeCCCceeccCCCCCCCCcCCHHHHH-HHHHHhhcC--CCCCCCCCHHHHHHHhhCHHHHHHHHH
Q 032075 68 AFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL-LSICSLLTD--PNPDDPLVPEIAHMYKTDRSKYETTAR 139 (148)
Q Consensus 68 ~f~t~i~Hpnv~~~G~icl~~l~~~W~p~~~i~~il-~~l~~ll~~--p~~~~~~n~~a~~~~~~~~~~f~~~~~ 139 (148)
+|.|++|||||+.+|.||+++|.++|+|++++.++| ..|++|+.. |++++|+|.|||++|++|+++|.++||
T Consensus 89 ~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vr 163 (167)
T 4ds2_A 89 RFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAARVR 163 (167)
T ss_dssp EESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHT
T ss_pred EEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHh
Confidence 999999999999999999999999999999999975 467777774 899999999999999999999999998
No 42
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=1.3e-43 Score=278.48 Aligned_cols=146 Identities=33% Similarity=0.582 Sum_probs=136.4
Q ss_pred hHHHHHHHHHHhhcCCCCC----eeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeec-----
Q 032075 2 ASKRILKELKDLQKDPPTS----CSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTK----- 72 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~----~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~----- 72 (148)
+.+||++|+++|+++++.+ +.+.+.++|++.|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+
T Consensus 77 ~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ 156 (323)
T 3ceg_A 77 RARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSV 156 (323)
T ss_dssp HHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcc
Confidence 6799999999999987764 4566788999999999999999999999999999999999999999999998
Q ss_pred cccceeeCCCceeccCCC-------CCCCCcC-CHHHHHHHHHHhhc--CCCCCCCCCHHH--HHHHhhCHHHHHHHHHH
Q 032075 73 VFHPNINSNGSICLDILK-------EQWSPAL-TISKVLLSICSLLT--DPNPDDPLVPEI--AHMYKTDRSKYETTARS 140 (148)
Q Consensus 73 i~Hpnv~~~G~icl~~l~-------~~W~p~~-~i~~il~~l~~ll~--~p~~~~~~n~~a--~~~~~~~~~~f~~~~~~ 140 (148)
+|||||+.+|.||+++|. ++|+|++ +|.+||.+|++||. +|++++|+|.++ +.++.+|+++|.++|+.
T Consensus 157 ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~~vr~ 236 (323)
T 3ceg_A 157 RFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQ 236 (323)
T ss_dssp CCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHHHHHH
Confidence 999999999999999997 6999999 89999999999996 677899999987 57899999999999999
Q ss_pred HHHHhhC
Q 032075 141 WTQKYAM 147 (148)
Q Consensus 141 ~~~~~a~ 147 (148)
|+++|||
T Consensus 237 ~t~k~A~ 243 (323)
T 3ceg_A 237 ATVKWAM 243 (323)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 9999996
No 43
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=3.8e-44 Score=257.03 Aligned_cols=128 Identities=28% Similarity=0.505 Sum_probs=119.0
Q ss_pred hHHHHHHHHHHhhcC-CCCCeeEeecC-C--CcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccce
Q 032075 2 ASKRILKELKDLQKD-PPTSCSAGPVA-E--DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN 77 (148)
Q Consensus 2 a~~RL~~E~~~l~~~-~~~~~~~~~~~-~--n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 77 (148)
+.+||++|+++|+++ ++.++++.+.+ + |+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++||||
T Consensus 22 ~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPN 101 (156)
T 2q0v_A 22 RSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSC 101 (156)
T ss_dssp HHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCC
Confidence 679999999999998 78999998864 3 5999999999999999999999999999999999999999999999999
Q ss_pred eeCCCce---eccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhC
Q 032075 78 INSNGSI---CLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD 130 (148)
Q Consensus 78 v~~~G~i---cl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~ 130 (148)
|+.+|.| |+++|. +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|
T Consensus 102 V~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 102 VDNCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp BCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred CccCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHhhhC
Confidence 9999999 888886 599999999999999999999999999999999998775
No 44
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=3.9e-43 Score=243.65 Aligned_cols=116 Identities=37% Similarity=0.704 Sum_probs=106.4
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeecc-ccceeeC
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV-FHPNINS 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i-~Hpnv~~ 80 (148)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++ |||||+.
T Consensus 7 a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~ 86 (125)
T 2fo3_A 7 ANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYS 86 (125)
T ss_dssp --CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCC
Confidence 679999999999999999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred CCceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCC
Q 032075 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 117 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~ 117 (148)
+|.||+++|.++|+|++++.+||.+|+++|.+|+.+.
T Consensus 87 ~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~p~~~~ 123 (125)
T 2fo3_A 87 NGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEKK 123 (125)
T ss_dssp TSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC------
T ss_pred CCEEEchhcCCCCCCCCcHHHHHHHHHHHHhCccccc
Confidence 9999999999999999999999999999999997653
No 45
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.4e-42 Score=242.04 Aligned_cols=114 Identities=38% Similarity=0.720 Sum_probs=110.7
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeecc-ccceeeC
Q 032075 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV-FHPNINS 80 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i-~Hpnv~~ 80 (148)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++ |||||+.
T Consensus 21 ~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~ 100 (136)
T 2h2y_A 21 ANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYS 100 (136)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCC
Confidence 679999999999999999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred CCceeccCCCCCCCCcCCHHHHHHHHHHhhcCCCC
Q 032075 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 115 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~ 115 (148)
+|.||+++|.++|+|++++.+||.+|++||.+|+.
T Consensus 101 ~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 101 NGDICLSVLGDDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp TCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCEEECccccCCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 99999999999999999999999999999999864
No 46
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=2.5e-42 Score=248.25 Aligned_cols=123 Identities=32% Similarity=0.516 Sum_probs=115.1
Q ss_pred hHHHHHHHHHHhhcCCCCC-eeEeec-CCC--cceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccce
Q 032075 2 ASKRILKELKDLQKDPPTS-CSAGPV-AED--MFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN 77 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~-~~~~~~-~~n--~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 77 (148)
+.+||++|+++|++++++| +.+.+. ++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 26 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 105 (160)
T 2a4d_A 26 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 105 (160)
T ss_dssp HHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCC
Confidence 5689999999999998888 777774 444 899999999999999999999999999999999999999999999999
Q ss_pred ee-CCCceeccCCC--CCCCCcCCHHHHHHHHHHhhc-CCCCCCCCCHHHH
Q 032075 78 IN-SNGSICLDILK--EQWSPALTISKVLLSICSLLT-DPNPDDPLVPEIA 124 (148)
Q Consensus 78 v~-~~G~icl~~l~--~~W~p~~~i~~il~~l~~ll~-~p~~~~~~n~~a~ 124 (148)
|+ .+|.||+++|. ++|+|+++|.+||.+|+++|. +||+++|+|.|||
T Consensus 106 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 106 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp BCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTC
T ss_pred EECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhhc
Confidence 99 69999999997 899999999999999999995 6999999999987
No 47
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=3.4e-43 Score=247.73 Aligned_cols=125 Identities=31% Similarity=0.617 Sum_probs=114.2
Q ss_pred hHHHHHHHHHHhhcC-CCCCeeEeecC-C--CcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccce
Q 032075 2 ASKRILKELKDLQKD-PPTSCSAGPVA-E--DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN 77 (148)
Q Consensus 2 a~~RL~~E~~~l~~~-~~~~~~~~~~~-~--n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 77 (148)
+.+||++|+++|+++ ++.++++.+.+ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 7 ~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 86 (138)
T 1jat_B 7 RNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPC 86 (138)
T ss_dssp HHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccCC
Confidence 468999999999998 78999998864 3 4999999999999999999999999999999999999999999999999
Q ss_pred eeCC-Cce--eccCCCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 032075 78 INSN-GSI--CLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMY 127 (148)
Q Consensus 78 v~~~-G~i--cl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~ 127 (148)
|+.+ |.| |++++. +|+|++++.+||.+|+++|.+|++++|+|.+||.+|
T Consensus 87 v~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 87 VNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp BCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred EeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 9975 999 999885 899999999999999999999999999999988654
No 48
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=9.3e-42 Score=247.64 Aligned_cols=123 Identities=32% Similarity=0.516 Sum_probs=115.0
Q ss_pred hHHHHHHHHHHhhcCCCCC-eeEeec-CCC--cceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccce
Q 032075 2 ASKRILKELKDLQKDPPTS-CSAGPV-AED--MFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN 77 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~-~~~~~~-~~n--~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 77 (148)
+.+||++|+++|++++++| +.+.+. ++| +++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++||||
T Consensus 36 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 115 (170)
T 2hlw_A 36 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 115 (170)
T ss_dssp HHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSS
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCC
Confidence 5799999999999998888 677764 444 999999999999999999999999999999999999999999999999
Q ss_pred ee-CCCceeccCCC--CCCCCcCCHHHHHHHHHHhhc-CCCCCCCCCHHHH
Q 032075 78 IN-SNGSICLDILK--EQWSPALTISKVLLSICSLLT-DPNPDDPLVPEIA 124 (148)
Q Consensus 78 v~-~~G~icl~~l~--~~W~p~~~i~~il~~l~~ll~-~p~~~~~~n~~a~ 124 (148)
|+ .+|.||+++|. ++|+|+++|.+||.+|+++|. .||+++|+|.|||
T Consensus 116 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 116 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp BCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred EeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 99 79999999997 899999999999999999997 5999999999987
No 49
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.8e-41 Score=234.89 Aligned_cols=109 Identities=42% Similarity=0.809 Sum_probs=105.1
Q ss_pred HHHHHHHHHHhhcCCCCCeeEe--ecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccc--ccee
Q 032075 3 SKRILKELKDLQKDPPTSCSAG--PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVF--HPNI 78 (148)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~~~~~--~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~--Hpnv 78 (148)
.+||++|+++|++++++|+++. +.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|++| ||||
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV 103 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHV 103 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTB
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccC
Confidence 3999999999999999999965 88899999999999999999999999999999999999999999999999 9999
Q ss_pred eCCCceeccCCCCCCCCcCCHHHHHHHHHHhhc
Q 032075 79 NSNGSICLDILKEQWSPALTISKVLLSICSLLT 111 (148)
Q Consensus 79 ~~~G~icl~~l~~~W~p~~~i~~il~~l~~ll~ 111 (148)
+.+|.||+++|.++|+|++++.+||.+|++||.
T Consensus 104 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 104 YSNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp CTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred CCCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 999999999999999999999999999999984
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-39 Score=239.12 Aligned_cols=135 Identities=24% Similarity=0.568 Sum_probs=112.9
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeC
Q 032075 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (148)
.|.+||++|+++|++++++|+.+.+.++|+++|+++|.||++|||+||.|++.|.||++||++||+|+|.|+ ||+|+.
T Consensus 14 ~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~ 91 (187)
T 2f4w_A 14 TATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKC 91 (187)
T ss_dssp CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cceecc
Confidence 378999999999999999999999999999999999999999999999999999999999999999999998 999999
Q ss_pred CCceeccCC---CCCCCCcCCHHHHHHHHHHhhcCCCCCCC---CCHHHHHHHhhCHHHHHHH
Q 032075 81 NGSICLDIL---KEQWSPALTISKVLLSICSLLTDPNPDDP---LVPEIAHMYKTDRSKYETT 137 (148)
Q Consensus 81 ~G~icl~~l---~~~W~p~~~i~~il~~l~~ll~~p~~~~~---~n~~a~~~~~~~~~~f~~~ 137 (148)
+|.||+++| .++|+|+++|.+||.+|+++|.+|+++.. ......+.|..+...|+.+
T Consensus 92 ~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~g~~~~~~~~r~~~a~~s~~~~~~ 154 (187)
T 2f4w_A 92 NTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLK 154 (187)
T ss_dssp TSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCTTBCCCCHHHHHHHHHHHHHHHHT
T ss_pred CCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCCcccccChHHHHHHHHHHHHHhhc
Confidence 999999999 68999999999999999999999988644 2333444454444444443
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=3.1e-40 Score=242.78 Aligned_cols=137 Identities=23% Similarity=0.530 Sum_probs=122.4
Q ss_pred hHHHHHHHHHHhhcCC---CCCeeEeecCCCcceEEEEEeCC-CCCCCCC-----------CEEEEEEEcCCCCCCCCCe
Q 032075 2 ASKRILKELKDLQKDP---PTSCSAGPVAEDMFHWQATIMGP-PDSPYAG-----------GVFLVTIHFPPDYPFKPPK 66 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~---~~~~~~~~~~~n~~~w~~~i~gp-~~t~y~g-----------~~f~~~i~fp~~YP~~pP~ 66 (148)
|.+||++|+++|++++ +.++++.+.++|+++|+++|.|| ++|||+| |.|++.|.||++||++||+
T Consensus 28 a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~ 107 (186)
T 1zuo_A 28 ASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPF 107 (186)
T ss_dssp HHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCCe
Confidence 6799999999999988 68899999999999999999997 9999998 8999999999999999999
Q ss_pred eEEeeccccc-eeeCCCceeccCCC-CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHH
Q 032075 67 VAFRTKVFHP-NINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQK 144 (148)
Q Consensus 67 v~f~t~i~Hp-nv~~~G~icl~~l~-~~W~p~~~i~~il~~l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~ 144 (148)
|+|.|++||| ||+.+|.||+++|. ++|+|+++|.+||.+|+++|.+|+... .|..++++|.+.++..+.+
T Consensus 108 V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a~~--------~~~~~~~~Y~~~~~~~~~~ 179 (186)
T 1zuo_A 108 VRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARV--------QFGANKNQYNLARAQQSYN 179 (186)
T ss_dssp EEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTCEE--------CTTCCTTCCCHHHHHHHHH
T ss_pred EEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCChhH--------hhccCHHHHhHHHHHHHHH
Confidence 9999999999 69999999999996 799999999999999999999986543 2344566777777766665
Q ss_pred hh
Q 032075 145 YA 146 (148)
Q Consensus 145 ~a 146 (148)
.+
T Consensus 180 ~~ 181 (186)
T 1zuo_A 180 SI 181 (186)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.95 E-value=1.1e-29 Score=180.84 Aligned_cols=96 Identities=18% Similarity=0.304 Sum_probs=89.7
Q ss_pred HHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCC----------EEEEEEEcCCCCCCCCCeeEEeec
Q 032075 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGG----------VFLVTIHFPPDYPFKPPKVAFRTK 72 (148)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~----------~f~~~i~fp~~YP~~pP~v~f~t~ 72 (148)
.+||++|+++|++ ++.++.+|+..|.+.+.||+||+|+|| .|.+++.||++||.+||+|+|.+.
T Consensus 34 ~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~ 107 (172)
T 2z6o_A 34 VQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPEL 107 (172)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCC
Confidence 7999999999999 577888999999999999999999999 999999999999999999999998
Q ss_pred -cccceeeCCCceeccCC-CC---CCCCcCCHHHHHH
Q 032075 73 -VFHPNINSNGSICLDIL-KE---QWSPALTISKVLL 104 (148)
Q Consensus 73 -i~Hpnv~~~G~icl~~l-~~---~W~p~~~i~~il~ 104 (148)
+||||||.+|+||||+| +. .|+|.++|.++|.
T Consensus 108 ~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 108 DGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp TTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred CCCCCCCCCCCcEechhhccccccccCCccCHHHHHh
Confidence 99999999999999999 43 4569999999984
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.85 E-value=2.7e-21 Score=138.56 Aligned_cols=113 Identities=25% Similarity=0.403 Sum_probs=92.2
Q ss_pred HHHHHHHHHhhcCCC---CCeeEeecCCCcceEEEEEeCCCCCCCCCCE---EEEEEEcCCCCCCCCCeeEEeec-----
Q 032075 4 KRILKELKDLQKDPP---TSCSAGPVAEDMFHWQATIMGPPDSPYAGGV---FLVTIHFPPDYPFKPPKVAFRTK----- 72 (148)
Q Consensus 4 ~RL~~E~~~l~~~~~---~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~---f~~~i~fp~~YP~~pP~v~f~t~----- 72 (148)
+|..+|..++.+.-+ +...+...++...++.+.+.|.-.++|+|+. |.+.|.||++||++||.|.|.++
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 567788877766422 2223344556667777777777779999999 88999999999999999987541
Q ss_pred -----cc-cceeeCCCceeccCCCCCCCC-cCCHHHHHHHHHHhhcCCCCCC
Q 032075 73 -----VF-HPNINSNGSICLDILKEQWSP-ALTISKVLLSICSLLTDPNPDD 117 (148)
Q Consensus 73 -----i~-Hpnv~~~G~icl~~l~~~W~p-~~~i~~il~~l~~ll~~p~~~~ 117 (148)
|+ |||||++|+||+++| ++|+| +.++.++|.+|+++|.+|+++.
T Consensus 111 ~~~~~I~~hpnVD~~G~I~lpyL-~~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 111 TISSSLPIQEYIDSNGWIALPIL-HAWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp TSCTTSTHHHHBCTTSBBCCGGG-GSCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred ccccccCCCCCCCCCCcEeCccc-ccCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 77 999999999999999 57999 5799999999999999999885
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.82 E-value=1.1e-21 Score=137.02 Aligned_cols=95 Identities=24% Similarity=0.420 Sum_probs=82.7
Q ss_pred HHHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCC----------EEEEEEEcCCCCCCCCCeeEEeec
Q 032075 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGG----------VFLVTIHFPPDYPFKPPKVAFRTK 72 (148)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~----------~f~~~i~fp~~YP~~pP~v~f~t~ 72 (148)
..||+.||+.|.+ +++.+.++-..|...+.|++||+|.|+ .|.+++.||.+||.+||+|+|.+.
T Consensus 36 ~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~l 109 (168)
T 3kpa_A 36 TARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPEL 109 (168)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccc
Confidence 4799999999988 677777788899999999999999999 899999999999999999999995
Q ss_pred -cccceeeCCCceeccCCC-CCC---CCcCCHHHHH
Q 032075 73 -VFHPNINSNGSICLDILK-EQW---SPALTISKVL 103 (148)
Q Consensus 73 -i~Hpnv~~~G~icl~~l~-~~W---~p~~~i~~il 103 (148)
++||+++.+|+|||+++. .-| .|.++|.+.|
T Consensus 110 dgkt~kmYr~GkICLdIhwkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 110 EGKTVKMYRGGKICMTTHFFPLWARNVPYFGISHVL 145 (168)
T ss_dssp TTTCSSEETTTEECCCTTHHHHHHHTTTTCCHHHHH
T ss_pred cCcCccccCCCcEEeccccchhhHhcCCchhHHHHH
Confidence 899999999999999872 223 3556777664
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.59 E-value=1.8e-15 Score=106.54 Aligned_cols=102 Identities=18% Similarity=0.369 Sum_probs=79.3
Q ss_pred HHHHHHHHhhcCCCC-CeeEe---ecCCCcceEEEEEeCCCCCCCCCCEEEE--EEEcCCCCCCCCCeeEEeec------
Q 032075 5 RILKELKDLQKDPPT-SCSAG---PVAEDMFHWQATIMGPPDSPYAGGVFLV--TIHFPPDYPFKPPKVAFRTK------ 72 (148)
Q Consensus 5 RL~~E~~~l~~~~~~-~~~~~---~~~~n~~~w~~~i~gp~~t~y~g~~f~~--~i~fp~~YP~~pP~v~f~t~------ 72 (148)
+..+|...+.+.-+. ..... ....++..|.++|. .+|+|+.|.+ .|.||++||++||.| |.++
T Consensus 24 ~t~~dv~~vl~~yp~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I 98 (146)
T 3obq_A 24 LTVRETVNVITLYKDLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTI 98 (146)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEE
T ss_pred hhHHHHHHHHHhCCCCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEE
Confidence 345566666553221 11111 23368999999997 5799999985 899999999999999 6655
Q ss_pred cccceeeCCCceeccCCCCCCCC-cCCHHHHHHHHHHhhcC
Q 032075 73 VFHPNINSNGSICLDILKEQWSP-ALTISKVLLSICSLLTD 112 (148)
Q Consensus 73 i~Hpnv~~~G~icl~~l~~~W~p-~~~i~~il~~l~~ll~~ 112 (148)
..|||||.+|+||++.|. +|++ +.++.+++..|++.|.+
T Consensus 99 ~~~~~Vd~~G~i~lpyL~-~W~~~~snL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 99 KTGKHVDANGKIYLPYLH-EWKHPQSDLLGLIQVMIVVFGD 138 (146)
T ss_dssp CCBTTBCTTCBBCCHHHH-TCCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCEeccccc-ccCCCCCCHHHHHHHHHHHHhh
Confidence 489999999999999994 5997 78999999999999974
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.18 E-value=0.0055 Score=41.23 Aligned_cols=66 Identities=15% Similarity=0.194 Sum_probs=43.6
Q ss_pred HHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEee
Q 032075 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRT 71 (148)
Q Consensus 4 ~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t 71 (148)
.+...|+..|...-+..+.+ ..+....+.+.|....+..-+.-.+.+.|.+|++||.+||.+.+.+
T Consensus 13 e~q~~EleaL~sIy~d~~~~--~~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 13 EEQRNELEALESIYPDSFTV--LSENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHCSSSEEE--CCSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred HHHHHHHHHHHHHccCceEE--ccCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 56678888888765444443 2233456666665322222234578999999999999999997654
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.65 E-value=0.016 Score=38.82 Aligned_cols=68 Identities=13% Similarity=0.176 Sum_probs=42.2
Q ss_pred HHHHHHHHhhcCCCCCeeEeecC--CCcceEEEEEeCCCCCCC--CCCEEEEEEEcCCCCCCCCCeeEEeec
Q 032075 5 RILKELKDLQKDPPTSCSAGPVA--EDMFHWQATIMGPPDSPY--AGGVFLVTIHFPPDYPFKPPKVAFRTK 72 (148)
Q Consensus 5 RL~~E~~~l~~~~~~~~~~~~~~--~n~~~w~~~i~gp~~t~y--~g~~f~~~i~fp~~YP~~pP~v~f~t~ 72 (148)
+...|+..|...-+..+.+.... .+...+.+.+..+.+..- ..-.+.+.|.+|++||.++|.|...+.
T Consensus 12 ~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 12 VLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp HHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 56788888887655555443221 123444555542222111 124788999999999999999987763
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=96.38 E-value=0.034 Score=37.77 Aligned_cols=66 Identities=12% Similarity=0.224 Sum_probs=41.6
Q ss_pred HHHHHHHHhhcCCCCCeeEeecC------CCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEee
Q 032075 5 RILKELKDLQKDPPTSCSAGPVA------EDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRT 71 (148)
Q Consensus 5 RL~~E~~~l~~~~~~~~~~~~~~------~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t 71 (148)
+-..|+..|...-+..+...... .....+.+.|....+ .-..-.+.+.|.+|++||.+||.|.+.+
T Consensus 14 ~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 14 IQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp HHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred HHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 45677888877544433321110 124567777763222 1123478899999999999999998764
No 59
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=95.54 E-value=0.22 Score=35.89 Aligned_cols=85 Identities=15% Similarity=0.282 Sum_probs=60.4
Q ss_pred HHHHHHHHHhhcCCCCCeeEeecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeCCCc
Q 032075 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGS 83 (148)
Q Consensus 4 ~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~G~ 83 (148)
.+|.+|+.+|-=+ .+.-.+.++....+.+.. =.|..+.++|.++.+||.+||.+...-|. |
T Consensus 4 ~~li~Ei~~iGW~-----~l~~id~~~~~i~l~~~D-----~~gR~H~l~v~l~~~yp~~~P~~~~DlP~--~------- 64 (186)
T 3zqs_A 4 SSLIEEIGTLGWD-----KLVYADTCFSTIKLKAED-----ASGREHLITLKLKAKYPAESPDYFVDFPV--P------- 64 (186)
T ss_dssp CSHHHHHHHHCGG-----GEEEECTTSSEEEEEEEC-----TTSCEEEEEEECCTTTTTSCCEEECCCSS--C-------
T ss_pred HHHHHHHHHhCCc-----eeeeecCCccEEEEEEEe-----CCCCeEEEEEEECCCCCCCCCeeEEcCCC--C-------
Confidence 3677888777321 133345678888888873 24678899999999999999987544332 1
Q ss_pred eeccCCCCCCCCcCCHHHHHHHHHHhhcC
Q 032075 84 ICLDILKEQWSPALTISKVLLSICSLLTD 112 (148)
Q Consensus 84 icl~~l~~~W~p~~~i~~il~~l~~ll~~ 112 (148)
+.-.|++..++.+++.+.+..+.+
T Consensus 65 -----~~~~w~~~ssL~~v~~qF~~~Le~ 88 (186)
T 3zqs_A 65 -----FCASWTPQSSLISIYSQFLAAIES 88 (186)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHHHHH
T ss_pred -----cccccCCCccHHHHHHHHHHHHHH
Confidence 124799999999988877776653
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.51 E-value=0.07 Score=35.69 Aligned_cols=65 Identities=15% Similarity=0.089 Sum_probs=39.5
Q ss_pred HHHHHHHHhhcCCCC--CeeEe-ecCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEe
Q 032075 5 RILKELKDLQKDPPT--SCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFR 70 (148)
Q Consensus 5 RL~~E~~~l~~~~~~--~~~~~-~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~ 70 (148)
+...|+..|...-.. .+.+. ....+...+.+.+... +..-..-.+.+.|.+|.+||..||.|...
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~~-~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAE-GFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEECC-TTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecCC-CCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 456788777764222 23321 1112345777777632 21111347899999999999999998654
No 61
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=95.10 E-value=0.22 Score=34.55 Aligned_cols=23 Identities=17% Similarity=0.391 Sum_probs=20.9
Q ss_pred EEEEEEEcCCCCCCCCCeeEEee
Q 032075 49 VFLVTIHFPPDYPFKPPKVAFRT 71 (148)
Q Consensus 49 ~f~~~i~fp~~YP~~pP~v~f~t 71 (148)
.+.++|.+|.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 79999999999999999998664
No 62
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=94.98 E-value=0.15 Score=34.35 Aligned_cols=67 Identities=15% Similarity=0.178 Sum_probs=40.7
Q ss_pred HHHHHHHHHhhcCCCCCeeEeecCC-----CcceEEEEEeCCCC-C-CCCCCEEEEEEEcCCCCCCCCCeeEEee
Q 032075 4 KRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPD-S-PYAGGVFLVTIHFPPDYPFKPPKVAFRT 71 (148)
Q Consensus 4 ~RL~~E~~~l~~~~~~~~~~~~~~~-----n~~~w~~~i~gp~~-t-~y~g~~f~~~i~fp~~YP~~pP~v~f~t 71 (148)
.+...|+..|...-...+....... ......+.|. +.+ . .-..-.+.+.|.||++||.++|.|.+.+
T Consensus 13 e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 13 QRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred HHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 4567788888775444444321111 1345566665 222 1 0112468999999999999999998743
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=93.36 E-value=0.26 Score=33.95 Aligned_cols=24 Identities=25% Similarity=0.530 Sum_probs=20.9
Q ss_pred EEEEEEEcCCCCCCCCCeeEEeec
Q 032075 49 VFLVTIHFPPDYPFKPPKVAFRTK 72 (148)
Q Consensus 49 ~f~~~i~fp~~YP~~pP~v~f~t~ 72 (148)
.+.+.|.+|.+||..||.|.....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 688999999999999999986653
No 64
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=86.92 E-value=0.12 Score=33.98 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=0.0
Q ss_pred CCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhh
Q 032075 113 PNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYA 146 (148)
Q Consensus 113 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a 146 (148)
.....|.+.+.|+.|.++++.|.+.|+.|+.-+|
T Consensus 21 ~~~~~PQDA~VA~qy~~~~~~f~~TAr~WT~~~a 54 (108)
T 2cwb_A 21 ETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDA 54 (108)
T ss_dssp ----------------------------------
T ss_pred cccCCchhHHHHHHHHhchhccccccccccccCc
Confidence 3456889999999999999999999999996555
No 65
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=77.47 E-value=1.8 Score=20.16 Aligned_cols=19 Identities=37% Similarity=0.704 Sum_probs=16.4
Q ss_pred HHHHHHHHHHhhcCCCCCe
Q 032075 3 SKRILKELKDLQKDPPTSC 21 (148)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~~ 21 (148)
+.||.-|+..++.+|++|.
T Consensus 7 ldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 7 LDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHhhhccCCCCCC
Confidence 5799999999999998874
No 66
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=34.73 E-value=99 Score=21.71 Aligned_cols=43 Identities=19% Similarity=0.331 Sum_probs=31.5
Q ss_pred CCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeec
Q 032075 28 EDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTK 72 (148)
Q Consensus 28 ~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~ 72 (148)
+....|.|.+.|+.+.-...-+=++.+.+.+.||. |.-.+..+
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~P 72 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAP 72 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSS
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCC
Confidence 46789999999987654555667888999999975 55444443
No 67
>1h3o_B Transcription initiation factor TFIID 20/15 kDa subunits; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=29.60 E-value=72 Score=19.19 Aligned_cols=41 Identities=12% Similarity=0.241 Sum_probs=30.9
Q ss_pred HHHhhcCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHHHHhh
Q 032075 106 ICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYA 146 (148)
Q Consensus 106 l~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~~~a 146 (148)
|+.|+..-++...+.+++..+..+=-+.|...+-..+.+.|
T Consensus 11 L~~Lv~~idp~~~ld~~vee~ll~lADdFV~~V~~~ac~lA 51 (76)
T 1h3o_B 11 LQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLA 51 (76)
T ss_dssp HHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555444667888999988888888888888877777666
No 68
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=28.86 E-value=53 Score=23.65 Aligned_cols=25 Identities=16% Similarity=0.307 Sum_probs=21.4
Q ss_pred CCCEEEEEEEcCCCCCC-----CCCeeEEe
Q 032075 46 AGGVFLVTIHFPPDYPF-----KPPKVAFR 70 (148)
Q Consensus 46 ~g~~f~~~i~fp~~YP~-----~pP~v~f~ 70 (148)
+.|.|.|+-.+|.-||. .||.|.|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 46889999999999998 78888765
No 69
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=27.24 E-value=64 Score=18.52 Aligned_cols=20 Identities=5% Similarity=0.149 Sum_probs=17.5
Q ss_pred CCHHHHHHHhhCHHHHHHHH
Q 032075 119 LVPEIAHMYKTDRSKYETTA 138 (148)
Q Consensus 119 ~n~~a~~~~~~~~~~f~~~~ 138 (148)
.|++.+++..+|.++|.+..
T Consensus 37 ~nP~l~~~I~~n~e~Fl~ll 56 (61)
T 2f4m_B 37 ENPQLLQQISQHQEHFIQML 56 (61)
T ss_dssp HCHHHHHHHHHSHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHH
Confidence 58899999999999998865
No 70
>3s7v_A Major capsid protein VP1; jelly-roll, antiparallel beta sandwich, major capsid protein protein; 2.55A {Ki polyomavirus} PDB: 3s7x_A
Probab=27.10 E-value=1.2e+02 Score=22.67 Aligned_cols=40 Identities=20% Similarity=0.372 Sum_probs=26.8
Q ss_pred CCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeCCCc--eec
Q 032075 44 PYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGS--ICL 86 (148)
Q Consensus 44 ~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~G~--icl 86 (148)
.=|...|..++.=.. ..||.+.|....-.+..|++|. +|.
T Consensus 198 kNENtRYFG~~tGG~---~TPPVl~ftNt~TTvLLDENGVGpLCk 239 (277)
T 3s7v_A 198 RNDNCRYFGRVVGGA---ATPPVVSYGNNSTIPLLDENGIGILCL 239 (277)
T ss_dssp SCCSEEEEEEEECCS---SCCCEEEEESSCCEECCCTTSCCEECT
T ss_pred cCcCceeeEEecCCC---CCCCeEEecCceeEEEEcCCCcccccc
Confidence 334444444444333 3699999998888888998765 775
No 71
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=25.44 E-value=65 Score=19.20 Aligned_cols=21 Identities=5% Similarity=0.146 Sum_probs=18.8
Q ss_pred CCHHHHHHHhhCHHHHHHHHH
Q 032075 119 LVPEIAHMYKTDRSKYETTAR 139 (148)
Q Consensus 119 ~n~~a~~~~~~~~~~f~~~~~ 139 (148)
.|++.+++..+|.++|.+...
T Consensus 39 ~NPqL~q~I~~n~e~Fl~ll~ 59 (72)
T 1pve_A 39 ENPQLLQQISQHQEHFIQMLN 59 (72)
T ss_dssp TCHHHHHHHHTTHHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHHc
Confidence 689999999999999998764
No 72
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=24.79 E-value=1.6e+02 Score=19.80 Aligned_cols=43 Identities=16% Similarity=0.328 Sum_probs=31.8
Q ss_pred cceEE--EEEeCCCCCCCC-CCEEEEEEEcCCCCCCCCCeeEEeeccc
Q 032075 30 MFHWQ--ATIMGPPDSPYA-GGVFLVTIHFPPDYPFKPPKVAFRTKVF 74 (148)
Q Consensus 30 ~~~w~--~~i~gp~~t~y~-g~~f~~~i~fp~~YP~~pP~v~f~t~i~ 74 (148)
+..|. +.+.|+.|.... .-+=++...+-+.|+. |...+..+.|
T Consensus 32 ~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~n--p~r~v~~pPF 77 (140)
T 3qrl_A 32 VRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFAN--PNRTFTDPPF 77 (140)
T ss_dssp CEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSSS--CEEEECSTTC
T ss_pred ccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCCC--CeEEEcCCCc
Confidence 46998 899998887664 4566788888898874 7666665544
No 73
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=23.76 E-value=52 Score=17.22 Aligned_cols=13 Identities=46% Similarity=0.639 Sum_probs=10.4
Q ss_pred HHHHHHHHHHhhc
Q 032075 3 SKRILKELKDLQK 15 (148)
Q Consensus 3 ~~RL~~E~~~l~~ 15 (148)
.+|+..|++++.+
T Consensus 30 ~~~~~~~~~~~~~ 42 (42)
T 3g9r_A 30 IKRIENEIKRIKK 42 (42)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcC
Confidence 5899999988753
No 74
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=22.15 E-value=22 Score=16.41 Aligned_cols=14 Identities=29% Similarity=0.679 Sum_probs=7.0
Q ss_pred CCCeeEEeeccccc
Q 032075 63 KPPKVAFRTKVFHP 76 (148)
Q Consensus 63 ~pP~v~f~t~i~Hp 76 (148)
.-|.-.|....|||
T Consensus 6 tlpenyfserpyhp 19 (26)
T 2jrw_A 6 TLPENYFSERPYHP 19 (26)
T ss_dssp CCSSSSCCSSSCCS
T ss_pred ccchhhcccCCCCC
Confidence 33444455555665
No 75
>1sid_A Polyomavirus coat protein VP1; icosahedral virus; HET: SIA GAL BGC; 3.65A {Mouse polyomavirus} SCOP: b.121.6.1 PDB: 1sie_A*
Probab=22.07 E-value=1.5e+02 Score=23.25 Aligned_cols=24 Identities=25% Similarity=0.610 Sum_probs=18.9
Q ss_pred CCCeeEEeeccccceeeCCCc--eec
Q 032075 63 KPPKVAFRTKVFHPNINSNGS--ICL 86 (148)
Q Consensus 63 ~pP~v~f~t~i~Hpnv~~~G~--icl 86 (148)
.||.+.|....-.+..|+||. +|.
T Consensus 249 TPPVlqftNt~TTvLLDENGVGpLCk 274 (383)
T 1sid_A 249 TPPVLQFTNTLTTVLLDENGVGPLCK 274 (383)
T ss_dssp CCCEEEEESSCEEECCCTTSCCCBCS
T ss_pred CCCeEEeccceeEEEEcCCCcccccc
Confidence 599999987777788888764 554
No 76
>1vps_A Polyomavirus VP1 pentamer; virus coat protein, oligosaccharide binding, virus assembly, acid, viral protein; HET: SIA GAL NAG; 1.90A {Murine polyomavirus} SCOP: b.121.6.1 PDB: 1vpn_A* 1cn3_A
Probab=21.46 E-value=1.9e+02 Score=21.81 Aligned_cols=40 Identities=15% Similarity=0.281 Sum_probs=26.3
Q ss_pred CCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeCCCc--eec
Q 032075 44 PYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGS--ICL 86 (148)
Q Consensus 44 ~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~G~--icl 86 (148)
.=|...|..++.=.. ..||.+.|....-.+..|++|. +|.
T Consensus 202 kNENtRYFG~~tGG~---~TPpvl~ftNt~TtvLldEnGvGpLCk 243 (289)
T 1vps_A 202 KNENTRYFGNYTGGT---TTPPVLQFTNTLTTVLLDENGVGPLCK 243 (289)
T ss_dssp SCTTEEEEEEEECCS---SCCCEEEEESSCCEECCCTTSCCCEES
T ss_pred cCcCceeeeeecCCC---CCCCeEEecCceeEEEEcCCCcccccc
Confidence 334444444444333 3699999998877888998765 775
No 77
>3rco_A Tudor domain-containing protein 7; structural genomics, structural genomics consortium, SGC, HL DNA binding protein; 1.80A {Homo sapiens} PDB: 2lh9_A
Probab=20.86 E-value=54 Score=20.42 Aligned_cols=19 Identities=26% Similarity=0.153 Sum_probs=15.6
Q ss_pred hHHHHHHHHHHhhcCCCCC
Q 032075 2 ASKRILKELKDLQKDPPTS 20 (148)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~ 20 (148)
.+++|++||+.+...+.|.
T Consensus 30 tl~~L~~DYr~l~G~~iP~ 48 (89)
T 3rco_A 30 ALPRLQGEYRSLTGDWIPF 48 (89)
T ss_dssp EHHHHHHHHHHHHSSCCCT
T ss_pred CHHHHHHHHHHHhCCcCCh
Confidence 4689999999999886653
No 78
>3nxg_A Major capsid protein VP1; beta-sandwich jelly roll, viral protein; 1.95A {Jc polyomavirus} PDB: 3nxd_C 3bwr_A* 3bwq_A*
Probab=20.21 E-value=1.2e+02 Score=22.68 Aligned_cols=44 Identities=14% Similarity=0.214 Sum_probs=28.9
Q ss_pred CCCCCCCCCEEEEEEEcCCCCCCCCCeeEEeeccccceeeCCCc--eec
Q 032075 40 PPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGS--ICL 86 (148)
Q Consensus 40 p~~t~y~g~~f~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~G~--icl 86 (148)
|+-+.=|...|..++.=.. ..||.+.|....-.+..|++|. +|.
T Consensus 185 pDPskNENtRYfG~~tGG~---~TPPVlqftNt~TTvLLDENGVGpLCk 230 (272)
T 3nxg_A 185 PDPTRNENTRYFGTLTGGE---NVPPVLHITNTATTVLLDEFGVGPLCK 230 (272)
T ss_dssp ECTTSCTTEEEEEEEECST---TCCCEEEEESSCCEECCCTTSCCCBCG
T ss_pred CCCCcCcCceeEEEecCCC---CCCCeEEecCceeEEEEcCCCcccccc
Confidence 3334444555555554433 3699999998888888998765 674
Done!