BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 032076
         (148 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O49856|FTRC_SOYBN Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic
           OS=Glycine max GN=FTRC PE=2 SV=1
          Length = 144

 Score =  229 bits (584), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 111/148 (75%), Positives = 123/148 (83%), Gaps = 4/148 (2%)

Query: 1   MTLQSSLCGSGVSTFICTPRPIIARPRPVTQIRAQVEPSEKSVEIMRKFSEQYARRSDTF 60
           MT Q+S     V + + TP     R R    +RAQ EPS+KSVEIMRKFSEQYAR+S T+
Sbjct: 1   MTTQASTFAVAVPS-VATP---FRRHRNPFVVRAQAEPSDKSVEIMRKFSEQYARKSGTY 56

Query: 61  FCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCM 120
           FCVDK VTSVVIKGLADHKD+LGAPLCPCRHYDDKAAE  QGFWNCPCVPMRERKECHCM
Sbjct: 57  FCVDKGVTSVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCM 116

Query: 121 LFLTPENDFAGQDQSISLDEIKESTANM 148
           LFLTP+NDFAG +Q+I+LDEIKESTANM
Sbjct: 117 LFLTPDNDFAGNEQTITLDEIKESTANM 144


>sp|Q9SJ89|FTRC_ARATH Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic
           OS=Arabidopsis thaliana GN=FTRC PE=2 SV=1
          Length = 146

 Score =  227 bits (578), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 112/150 (74%), Positives = 121/150 (80%), Gaps = 6/150 (4%)

Query: 1   MTLQSSLCGSGV--STFICTPRPIIARPRPVTQIRAQVEPSEKSVEIMRKFSEQYARRSD 58
           M LQ+  C  G   S    TPR    R      IRA+ EPSEKSVEIMRKFSEQYARRS 
Sbjct: 1   MNLQAVSCSFGFLSSPLGVTPRTSFRR----FVIRAKTEPSEKSVEIMRKFSEQYARRSG 56

Query: 59  TFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECH 118
           T+FCVDK VTSVVIKGLA+HKDS GAPLCPCRHYDDKAAE  QGFWNCPCVPMRERKECH
Sbjct: 57  TYFCVDKGVTSVVIKGLAEHKDSYGAPLCPCRHYDDKAAEVGQGFWNCPCVPMRERKECH 116

Query: 119 CMLFLTPENDFAGQDQSISLDEIKESTANM 148
           CMLFLTP+NDFAG+DQ+I+ DEIKE+TANM
Sbjct: 117 CMLFLTPDNDFAGKDQTITSDEIKETTANM 146


>sp|P41349|FTRC2_SPIOL Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic
           OS=Spinacia oleracea PE=2 SV=1
          Length = 148

 Score =  224 bits (571), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 103/122 (84%), Positives = 113/122 (92%)

Query: 27  RPVTQIRAQVEPSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPL 86
           RP   I ++VEPS+KSVEIMRKFSEQYAR+S T+FCVDK VTSVVIKGLA+HKDSLGAPL
Sbjct: 27  RPQCVILSKVEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTSVVIKGLAEHKDSLGAPL 86

Query: 87  CPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTA 146
           CPCR+YDDKAAEA QGFWNCPCVPMRERKECHCMLFLTPENDFAG+DQ+I LDEI+E TA
Sbjct: 87  CPCRYYDDKAAEATQGFWNCPCVPMRERKECHCMLFLTPENDFAGKDQTIGLDEIREVTA 146

Query: 147 NM 148
           NM
Sbjct: 147 NM 148


>sp|P41348|FTRC1_SPIOL Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic
           OS=Spinacia oleracea GN=FTRC PE=1 SV=2
          Length = 144

 Score =  219 bits (558), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 98/126 (77%), Positives = 118/126 (93%), Gaps = 1/126 (0%)

Query: 24  ARPRPVTQ-IRAQVEPSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSL 82
           A PR  ++ IRAQ +PS+KS+E+MRKFSEQ+ R+SDT+FCVDKSVT+VVIKGLADH+D+L
Sbjct: 19  ASPRRFSRVIRAQADPSDKSMEVMRKFSEQFCRKSDTYFCVDKSVTAVVIKGLADHRDTL 78

Query: 83  GAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIK 142
           GAPLCPCRHYDDK AEA+QGFWNCPCVPMRERKECHCMLFLTP+NDFAG++Q+I+LDEI+
Sbjct: 79  GAPLCPCRHYDDKEAEAKQGFWNCPCVPMRERKECHCMLFLTPDNDFAGKEQTITLDEIR 138

Query: 143 ESTANM 148
           E T+NM
Sbjct: 139 EVTSNM 144


>sp|P41347|FTRC_MAIZE Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic
           OS=Zea mays GN=FTRC PE=2 SV=1
          Length = 152

 Score =  207 bits (528), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 96/129 (74%), Positives = 110/129 (85%), Gaps = 5/129 (3%)

Query: 24  ARPRPVTQIRAQVE----PSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHK 79
            RPR    +RAQ       ++KSVE+MRKFSEQYARRS+TFFC DK+VT+VVIKGLADH+
Sbjct: 25  GRPRRCA-VRAQAAGADASNDKSVEVMRKFSEQYARRSNTFFCADKTVTAVVIKGLADHR 83

Query: 80  DSLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLD 139
           D+LGAPLCPCRHYDDKAAE  QGFWNCPCVPMRERKECHCMLFLTP+NDFAG+DQ IS +
Sbjct: 84  DTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLTPDNDFAGKDQVISFE 143

Query: 140 EIKESTANM 148
           EIKE+T+  
Sbjct: 144 EIKEATSKF 152


>sp|Q6K471|FTRC_ORYSJ Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic
           OS=Oryza sativa subsp. japonica GN=Os09g0249900 PE=2
           SV=1
          Length = 146

 Score =  204 bits (520), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 91/108 (84%), Positives = 103/108 (95%)

Query: 41  KSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQ 100
           KS+EIMRKFSEQYARRS+TFFC +KSVT+VVIKGLADHKD LGAPLCPCRHYDDKAAE  
Sbjct: 39  KSLEIMRKFSEQYARRSNTFFCSEKSVTAVVIKGLADHKDQLGAPLCPCRHYDDKAAEVA 98

Query: 101 QGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTANM 148
           QGFWNCPCVPMRERKECHCMLFLTP+NDFAGQDQ+I+L+EIK++T+ +
Sbjct: 99  QGFWNCPCVPMRERKECHCMLFLTPDNDFAGQDQAITLEEIKDATSKI 146


>sp|Q1XDA1|FTRC_PORYE Ferredoxin-thioredoxin reductase, catalytic chain OS=Porphyra
           yezoensis GN=ftrB PE=3 SV=2
          Length = 116

 Score =  157 bits (396), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 68/103 (66%), Positives = 82/103 (79%)

Query: 41  KSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQ 100
           +++E MRKFSE YA+R+ TFFC+D SVT+VVI+GLA HKD  GAPLCPCRHY+DK AE  
Sbjct: 11  ENLEAMRKFSETYAKRTGTFFCIDSSVTAVVIEGLARHKDQYGAPLCPCRHYEDKKAEIS 70

Query: 101 QGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKE 143
             +WNCPCVPMRER+ECHCMLFLTP+N+FA   Q I    + E
Sbjct: 71  ATYWNCPCVPMRERRECHCMLFLTPDNEFASDLQEIDKTTLTE 113


>sp|P51386|FTRC_PORPU Ferredoxin-thioredoxin reductase, catalytic chain OS=Porphyra
           purpurea GN=ftrB PE=3 SV=1
          Length = 118

 Score =  157 bits (396), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 69/106 (65%), Positives = 81/106 (76%)

Query: 42  SVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQQ 101
           ++E MRKFSE YA+R+ TFFC D SVT+VVI+GLA HKD  GAPLCPCRHY+DK AE   
Sbjct: 12  NLEAMRKFSETYAKRTGTFFCADNSVTAVVIEGLARHKDKYGAPLCPCRHYEDKKAEISA 71

Query: 102 GFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKESTAN 147
            +WNCPCVPMRERKECHCMLFLTP+N+F    Q I    + E  A+
Sbjct: 72  TYWNCPCVPMRERKECHCMLFLTPDNEFTSDLQEIDKTTLLEKIAS 117


>sp|O78461|FTRC_GUITH Ferredoxin-thioredoxin reductase, catalytic chain OS=Guillardia
           theta GN=ftrB PE=3 SV=1
          Length = 102

 Score =  152 bits (383), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 63/101 (62%), Positives = 79/101 (78%)

Query: 36  VEPSEKSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDK 95
           +E    S   M+KF+E YA+R++TFFC D S+T +V++GLA HKD  GAPLCPCRHYDDK
Sbjct: 2   IESYSDSFVAMKKFAETYAKRTNTFFCNDLSITQIVLEGLAKHKDEYGAPLCPCRHYDDK 61

Query: 96  AAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSI 136
           + E    +WNCPCVPMRERKECHCMLFLT +N+FAG  Q++
Sbjct: 62  SEEVASTYWNCPCVPMRERKECHCMLFLTKDNEFAGSSQTL 102


>sp|Q9TM25|FTRC_CYACA Ferredoxin-thioredoxin reductase, catalytic chain OS=Cyanidium
           caldarium GN=ftrB PE=3 SV=1
          Length = 111

 Score =  152 bits (383), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 62/103 (60%), Positives = 84/103 (81%)

Query: 41  KSVEIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEAQ 100
           K++E + KF+E YA+ S T+FC+D+S+T++VI+GLA HKD  GAPLCPCRHY++K  E  
Sbjct: 6   KNLESLHKFAEAYAKLSRTYFCIDQSITALVIEGLARHKDDYGAPLCPCRHYENKKTEVL 65

Query: 101 QGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQSISLDEIKE 143
             +WNCPCVPMRERKECHCMLFL P N+F+G+ Q IS D++++
Sbjct: 66  AAYWNCPCVPMRERKECHCMLFLQPSNEFSGESQLISKDDLQK 108


>sp|P46224|CH60_PYRSA 60 kDa chaperonin, chloroplastic OS=Pyrenomonas salina GN=groL
          PE=3 SV=1
          Length = 585

 Score = 47.4 bits (111), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 1/40 (2%)

Query: 46 MRKFSEQYARRSD-TFFCVDKSVTSVVIKGLADHKDSLGA 84
          MR+FSE Y ++   TFFC + S+T+VVI+GL  HK+  GA
Sbjct: 1  MRRFSETYGQKKQITFFCSNLSITAVVIEGLLKHKEEYGA 40


>sp|Q608Y9|NUON_METCA NADH-quinone oxidoreductase subunit N OS=Methylococcus capsulatus
           (strain ATCC 33009 / NCIMB 11132 / Bath) GN=nuoN PE=3
           SV=1
          Length = 493

 Score = 35.0 bits (79), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 23/46 (50%)

Query: 18  TPRPIIARPRPVTQIRAQVEPSEKSVEIMRKFSEQYARRSDTFFCV 63
           TP      P PVT   A V  +     ++R F+  +A RS+TF CV
Sbjct: 224 TPDVYQGAPTPVTAFLATVSKASVFALLLRFFTAAHAERSETFLCV 269


>sp|Q72DH6|SYY_DESVH Tyrosine--tRNA ligase OS=Desulfovibrio vulgaris (strain
           Hildenborough / ATCC 29579 / NCIMB 8303) GN=tyrS PE=3
           SV=1
          Length = 398

 Score = 31.2 bits (69), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 15/25 (60%), Positives = 17/25 (68%)

Query: 79  KDSLGAPLCPCRHYDDKAAEAQQGF 103
           K+SL   L    H +DKAAEAQQGF
Sbjct: 289 KESLAYELTTRYHGEDKAAEAQQGF 313


>sp|P47715|RPOB_MYCGA DNA-directed RNA polymerase subunit beta OS=Mycoplasma gallisepticum
            (strain R(low / passage 15 / clone 2)) GN=rpoB PE=3 SV=2
          Length = 1390

 Score = 30.8 bits (68), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 22/35 (62%)

Query: 49   FSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLG 83
            F ++ A + DT F ++KS T  +IK L +H  S+G
Sbjct: 1120 FDKKLADQLDTVFGLEKSKTQSLIKNLVEHMKSIG 1154


>sp|Q0TVB2|VPS10_PHANO Vacuolar protein sorting/targeting protein 10 OS=Phaeosphaeria
           nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)
           GN=VPS10 PE=3 SV=2
          Length = 1421

 Score = 30.4 bits (67), Expect = 3.7,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 14/100 (14%)

Query: 44  EIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCR--------HYDDK 95
           E++R +  QY      F    K V     +GL +   S  AP+ P +        H   K
Sbjct: 687 EVVRIYPHQYDNNYVYFLTASKKVHYSEDRGLRNSIHSFEAPVMPNQEMLQILQFHPKQK 746

Query: 96  AAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQS 135
                 G  NC  V     KECH   +++ +N   G+D+S
Sbjct: 747 GWLIWMGGKNCEKV---NSKECHTAAYVSQKN---GKDES 780


>sp|Q88BK3|DNAA_PSESM Chromosomal replication initiator protein DnaA OS=Pseudomonas
           syringae pv. tomato (strain DC3000) GN=dnaA PE=3 SV=1
          Length = 511

 Score = 30.4 bits (67), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 16  ICTPRPIIARPRPVTQIRAQVEPSEKSVEIMRKFSEQYA 54
           +  P P++A P PV  +    EPS  S + M   S Q A
Sbjct: 117 MAVPAPMVAAPVPVHNVATHDEPSRDSFDPMAGASSQQA 155


>sp|E3RE00|VPS10_PYRTT Vacuolar protein sorting/targeting protein 10 OS=Pyrenophora teres
           f. teres (strain 0-1) GN=vps10 PE=3 SV=1
          Length = 1490

 Score = 30.0 bits (66), Expect = 4.5,   Method: Composition-based stats.
 Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 14/100 (14%)

Query: 44  EIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCR--------HYDDK 95
           EI+R +  QY   +  F    K V     +GL D  +S  AP+ P          H   K
Sbjct: 735 EIVRIYPHQYETNNVYFLTASKKVYYSKDRGLHDSINSFEAPVMPNTDMLPIMQFHPKQK 794

Query: 96  AAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQS 135
                 G  NC  V     K+CH + +++ +N   G+D S
Sbjct: 795 DWIIWLGGKNCEKV---GNKDCHTVAYVSQKN---GEDSS 828


>sp|E4ZVX1|VPS10_LEPMJ Vacuolar protein sorting/targeting protein 10 OS=Leptosphaeria
           maculans (strain JN3 / isolate v23.1.3 / race
           Av1-4-5-6-7-8) GN=VPS10 PE=3 SV=2
          Length = 1477

 Score = 29.6 bits (65), Expect = 5.9,   Method: Composition-based stats.
 Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 14/100 (14%)

Query: 44  EIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCR--------HYDDK 95
           EI+R +  QY      F    K V     +GL D   S  AP  P          H + K
Sbjct: 739 EIVRIYPHQYENNYVYFLTATKKVYYSEDRGLHDSIHSFQAPTMPNTERLEIMRFHPNQK 798

Query: 96  AAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQS 135
                 G  NC  V     K+CH + +++ +N   GQ++S
Sbjct: 799 GWLIWMGGKNCEKV---GDKDCHTVSYISQKN---GQEES 832


>sp|B2WDP9|VPS10_PYRTR Vacuolar protein sorting/targeting protein 10 OS=Pyrenophora
           tritici-repentis (strain Pt-1C-BFP) GN=vps10 PE=3 SV=1
          Length = 1491

 Score = 29.3 bits (64), Expect = 8.1,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 14/100 (14%)

Query: 44  EIMRKFSEQYARRSDTFFCVDKSVTSVVIKGLADHKDSLGAPLCPCR--------HYDDK 95
           EI+R +  QY   +  F    K V     +GL D  +S  AP+ P          H   K
Sbjct: 735 EIVRIYPHQYENNNVYFLTASKKVYYSKDRGLHDSINSFEAPVMPNTEMLPIMQFHPKQK 794

Query: 96  AAEAQQGFWNCPCVPMRERKECHCMLFLTPENDFAGQDQS 135
                 G  NC  +     K+CH + +++ +N   G+D S
Sbjct: 795 DWIIWLGGKNCEKL---GNKDCHTVAYVSQKN---GEDSS 828


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.133    0.414 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,471,066
Number of Sequences: 539616
Number of extensions: 1873280
Number of successful extensions: 4052
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 4037
Number of HSP's gapped (non-prelim): 20
length of query: 148
length of database: 191,569,459
effective HSP length: 106
effective length of query: 42
effective length of database: 134,370,163
effective search space: 5643546846
effective search space used: 5643546846
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)