BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032079
(147 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255572781|ref|XP_002527323.1| double-stranded RNA binding protein, putative [Ricinus communis]
gi|223533323|gb|EEF35075.1| double-stranded RNA binding protein, putative [Ricinus communis]
Length = 219
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 97/142 (68%), Gaps = 14/142 (9%)
Query: 11 DDDALFCLTKHIDPNS----TSSVINNIETSGYDYEDDRFYEKESKNEGAPNKVSAKSKL 66
DD + C KHID N+ T S +N Y+ D+R +S +VSAKS+L
Sbjct: 84 DDLSSVCAIKHIDSNNFVKKTHSKLN------YEGSDNRVLVDKS---SELKRVSAKSQL 134
Query: 67 HEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFE-IESLNTILECFGAPQSKKKTAAEH 125
HEIC AN+WKPP ++CC+EEGPC+++LFTFKV E I + +LEC+G P+ KKKTAAEH
Sbjct: 135 HEICVANNWKPPLYECCKEEGPCHQRLFTFKVIVEMIGAEYIVLECYGIPKIKKKTAAEH 194
Query: 126 AAEGALWYLEHLGYFPIRKLKK 147
AAEGALWYL+HLGYFPI K K
Sbjct: 195 AAEGALWYLKHLGYFPINKWDK 216
>gi|224072687|ref|XP_002303835.1| predicted protein [Populus trichocarpa]
gi|222841267|gb|EEE78814.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/144 (52%), Positives = 94/144 (65%), Gaps = 20/144 (13%)
Query: 5 ETMKSGDDDALFCLTKHIDPNSTSSVINNIETSGYDYEDDRFYEKESKNEGAPNKVSAKS 64
+ +K+GDD SS I N G +DD K S N+ K+SAKS
Sbjct: 40 QIIKTGDD---------------SSTIKNTTKVGEISKDD----KNSHNDSGGPKISAKS 80
Query: 65 KLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIES-LNTILECFGAPQSKKKTAA 123
+L E AAN WKPP F+C +EEGPC++KLFT+KV IE +T+LECFG P+ KKTAA
Sbjct: 81 QLLETLAANKWKPPLFECFKEEGPCHKKLFTYKVAIRIEGEASTVLECFGYPKPTKKTAA 140
Query: 124 EHAAEGALWYLEHLGYFPIRKLKK 147
EHAAEGALWYL+HLGYFPI+K+K+
Sbjct: 141 EHAAEGALWYLKHLGYFPIKKVKR 164
>gi|449468964|ref|XP_004152191.1| PREDICTED: uncharacterized protein LOC101212514 [Cucumis sativus]
gi|449528319|ref|XP_004171152.1| PREDICTED: uncharacterized protein LOC101230392 [Cucumis sativus]
Length = 227
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Query: 50 ESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIES-LNTI 108
+S EG P K +AKS L EIC ANHW+PP F+CC+EEGP + K + FKV E++ +
Sbjct: 133 DSTKEGTPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYRFKVRIEMKGDCEAV 192
Query: 109 LECFGAPQSKKKTAAEHAAEGALWYLEHLGY 139
+EC+G Q++KK AAEHAAEGALWYL HLGY
Sbjct: 193 VECYGNLQTRKKVAAEHAAEGALWYLNHLGY 223
>gi|397529815|gb|AFO53518.1| dicer-like protein 4 [Solanum lycopersicum]
Length = 1620
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 68/93 (73%)
Query: 48 EKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNT 107
++++K G SAKS+LHEICAAN WKPP F+CC+E GP + K FTF+V EIE +
Sbjct: 1525 KEDAKATGGSKTESAKSRLHEICAANCWKPPLFECCKETGPSHLKEFTFRVLVEIEETSR 1584
Query: 108 ILECFGAPQSKKKTAAEHAAEGALWYLEHLGYF 140
++E +G Q+KKK AAEHAAEGALW+L+ GY
Sbjct: 1585 VIESYGEAQAKKKDAAEHAAEGALWFLKQEGYL 1617
>gi|356546104|ref|XP_003541471.1| PREDICTED: dicer-like protein 4-like [Glycine max]
Length = 1636
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 64/82 (78%), Gaps = 1/82 (1%)
Query: 61 SAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEI-ESLNTILECFGAPQSKK 119
+A+S+L+E+CAA WKPPSF+CC++EGP + K FT KVT EI E+ N ILE G P SKK
Sbjct: 1551 TARSRLYELCAAYCWKPPSFECCKKEGPDHLKQFTCKVTLEIEEAQNLILEFVGEPLSKK 1610
Query: 120 KTAAEHAAEGALWYLEHLGYFP 141
K AAE AAEGALWYL+H G+ P
Sbjct: 1611 KDAAESAAEGALWYLQHEGFLP 1632
>gi|255638997|gb|ACU19799.1| unknown [Glycine max]
Length = 168
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Query: 61 SAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEI-ESLNTILECFGAPQSKK 119
+A+S+L+E+CA+ WKPPSF+CC+ EGP + K FT KVT EI E+ N ILE G P SKK
Sbjct: 83 TARSRLYELCASYCWKPPSFECCKAEGPDHLKQFTCKVTLEIEEAQNLILEFVGEPLSKK 142
Query: 120 KTAAEHAAEGALWYLEHLGYFPIR 143
K AAE AAEGA WYL+H GY P R
Sbjct: 143 KDAAESAAEGAFWYLQHEGYLPSR 166
>gi|356565129|ref|XP_003550797.1| PREDICTED: dicer-like protein 4-like [Glycine max]
Length = 1636
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
Query: 61 SAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEI-ESLNTILECFGAPQSKK 119
+A+S+L+E+CA+ WKPPSF+CC+ EGP + K FT KVT EI E+ N ILE G P SKK
Sbjct: 1551 TARSRLYELCASYCWKPPSFECCKAEGPDHLKQFTCKVTLEIEEAQNLILEFVGEPLSKK 1610
Query: 120 KTAAEHAAEGALWYLEHLGYFP 141
K AAE AAEGA WYL+H GY P
Sbjct: 1611 KDAAESAAEGAFWYLQHEGYLP 1632
>gi|293335075|ref|NP_001167848.1| uncharacterized protein LOC100381550 [Zea mays]
gi|223944409|gb|ACN26288.1| unknown [Zea mays]
Length = 264
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 69/99 (69%), Gaps = 3/99 (3%)
Query: 44 DRFYEKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE 103
D+ +KE G + +A+S L+E+CAAN+WKPP F+ C +EGP + + FT KV EI
Sbjct: 162 DKINQKEY--HGDMVRKTARSFLYELCAANYWKPPEFELCNDEGPSHLRKFTCKVLIEIT 219
Query: 104 SLN-TILECFGAPQSKKKTAAEHAAEGALWYLEHLGYFP 141
+ ++LEC+ P+ +K+ A EHAAEGALWYL+HLGY P
Sbjct: 220 GTSVSLLECYSDPKLQKRAAQEHAAEGALWYLKHLGYLP 258
>gi|413918885|gb|AFW58817.1| hypothetical protein ZEAMMB73_714278 [Zea mays]
Length = 306
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 69/99 (69%), Gaps = 3/99 (3%)
Query: 44 DRFYEKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE 103
D+ +KE G + +A+S L+E+CAAN+WKPP F+ C +EGP + + FT KV EI
Sbjct: 204 DKINQKEY--HGDMVRKTARSFLYELCAANYWKPPEFELCNDEGPSHLRKFTCKVLIEIT 261
Query: 104 SLN-TILECFGAPQSKKKTAAEHAAEGALWYLEHLGYFP 141
+ ++LEC+ P+ +K+ A EHAAEGALWYL+HLGY P
Sbjct: 262 GTSVSLLECYSDPKLQKRAAQEHAAEGALWYLKHLGYLP 300
>gi|297842797|ref|XP_002889280.1| hypothetical protein ARALYDRAFT_316895 [Arabidopsis lyrata subsp.
lyrata]
gi|297335121|gb|EFH65539.1| hypothetical protein ARALYDRAFT_316895 [Arabidopsis lyrata subsp.
lyrata]
Length = 190
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 77/123 (62%), Gaps = 4/123 (3%)
Query: 21 HIDPNSTSSVINNIETSGYDYEDDRFYEKESKNEGAPNKVSAKSKLHEICAANHWKPPSF 80
IDPNST S+ + ED +E + SAKS LHEICA+ W+PP +
Sbjct: 58 QIDPNSTRSITQENKLVPKPEEDTTTKPNSKGDES--KRGSAKSVLHEICASKRWRPPVY 115
Query: 81 DCCQEEGPCYRKLFTFKVTFEI--ESLNTILECFGAPQSKKKTAAEHAAEGALWYLEHLG 138
+CC+ +GPC+ +LFT+KV EI S T+LECFG P+ KK AAEHAAEGALWYLEH+
Sbjct: 116 ECCKVDGPCHLRLFTYKVVVEIIESSGKTVLECFGDPRRNKKAAAEHAAEGALWYLEHVK 175
Query: 139 YFP 141
P
Sbjct: 176 AKP 178
>gi|255565079|ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis]
gi|223537239|gb|EEF38871.1| Ribonuclease III, putative [Ricinus communis]
Length = 1633
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
Query: 61 SAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESL-NTILECFGAPQSKK 119
SAKS+LH+ICAAN WKPP F+CC EEGP + K F++KV EIE+ + ILECFGAP+ KK
Sbjct: 1550 SAKSRLHDICAANCWKPPLFECCYEEGPSHLKSFSYKVIVEIEAAPDMILECFGAPREKK 1609
Query: 120 KTAAEHAAEGALWYLEHLGYFPIR 143
K AAEHAAEGALWYL+H+GY ++
Sbjct: 1610 KAAAEHAAEGALWYLQHVGYLTVK 1633
>gi|379987682|gb|AFD22621.1| dicer-like 4 protein [Nicotiana attenuata]
Length = 1622
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 66/91 (72%)
Query: 50 ESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTIL 109
+SK G SAKS LHE+CAAN WKPP F+CC+E GP + K FTF+V EIE + ++
Sbjct: 1529 DSKATGGAINGSAKSILHEVCAANCWKPPRFECCKETGPSHLKEFTFRVVVEIEETSRVI 1588
Query: 110 ECFGAPQSKKKTAAEHAAEGALWYLEHLGYF 140
E GAP++KKK AAE AAEGALW+L+H GY
Sbjct: 1589 ESCGAPRAKKKDAAEDAAEGALWFLKHEGYM 1619
>gi|296084589|emb|CBI25610.3| unnamed protein product [Vitis vinifera]
Length = 1623
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 68/88 (77%), Gaps = 1/88 (1%)
Query: 54 EGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE-SLNTILECF 112
+G KVS K++++EICAAN+WKPPSF+CC+EEGP + KLFT K+T +IE +LEC+
Sbjct: 1531 QGGVQKVSTKARMYEICAANYWKPPSFECCKEEGPSHLKLFTVKLTMKIEDGSGLLLECY 1590
Query: 113 GAPQSKKKTAAEHAAEGALWYLEHLGYF 140
G P+S KK AA+ AAEGA+ YL+ GYF
Sbjct: 1591 GYPKSTKKAAADSAAEGAIAYLKQEGYF 1618
>gi|359484756|ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinifera]
Length = 1622
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 68/88 (77%), Gaps = 1/88 (1%)
Query: 54 EGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE-SLNTILECF 112
+G KVS K++++EICAAN+WKPPSF+CC+EEGP + KLFT K+T +IE +LEC+
Sbjct: 1530 QGGVQKVSTKARMYEICAANYWKPPSFECCKEEGPSHLKLFTVKLTMKIEDGSGLLLECY 1589
Query: 113 GAPQSKKKTAAEHAAEGALWYLEHLGYF 140
G P+S KK AA+ AAEGA+ YL+ GYF
Sbjct: 1590 GYPKSTKKAAADSAAEGAIAYLKQEGYF 1617
>gi|15220196|ref|NP_178180.1| RNAse THREE-like protein 1 [Arabidopsis thaliana]
gi|75264856|sp|Q9M8N2.1|RTL1_ARATH RecName: Full=Ribonuclease 3-like protein 1; AltName:
Full=Ribonuclease III-like protein 1; Short=RNase
III-like protein 1; AltName: Full=Ribonuclease
three-like protein 1
gi|6730736|gb|AAF27126.1|AC018849_14 hypothetical protein; 4021-3030 [Arabidopsis thaliana]
gi|26449780|dbj|BAC42013.1| unknown protein [Arabidopsis thaliana]
gi|28950719|gb|AAO63283.1| At1g80650 [Arabidopsis thaliana]
gi|332198311|gb|AEE36432.1| RNAse THREE-like protein 1 [Arabidopsis thaliana]
Length = 198
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 86/136 (63%), Gaps = 5/136 (3%)
Query: 11 DDDALFCLTK-HIDPNSTSSV-INNIETSGYDYEDDRFYEKESKN-EGAPNKVSAKSKLH 67
+D+A+ + IDPNST S+ + D E + SK+ E + SAKS LH
Sbjct: 61 EDNAISSFSNIQIDPNSTRSISLEKKLAPKPDEEHTTTTKPISKDDESKTRRGSAKSVLH 120
Query: 68 EICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE--SLNTILECFGAPQSKKKTAAEH 125
E+CA+ W+PP ++CC +GPC+ +LFT+KV EI S T+LECFG P+ KKK AAEH
Sbjct: 121 EMCASKRWRPPVYECCNVDGPCHLRLFTYKVMVEIRDSSGKTVLECFGDPRRKKKAAAEH 180
Query: 126 AAEGALWYLEHLGYFP 141
AAEGALWYLEH+ P
Sbjct: 181 AAEGALWYLEHVKTKP 196
>gi|357167959|ref|XP_003581414.1| PREDICTED: endoribonuclease Dicer homolog 4-like [Brachypodium
distachyon]
Length = 1627
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 61 SAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLN-TILECFGAPQSKK 119
+AKS L E+CAA++WKPP F C EEGP + + FT+KV +I + T+LEC+ + +K
Sbjct: 1539 TAKSFLFELCAASYWKPPEFQLCIEEGPSHLRRFTYKVIVQIRGPSETLLECYSDAKLQK 1598
Query: 120 KTAAEHAAEGALWYLEHLGYFP 141
K A EHAA+GALWYL+ L Y P
Sbjct: 1599 KAAQEHAAQGALWYLKQLEYLP 1620
>gi|157279689|dbj|BAF80150.1| SHOOT ORGANIZATION1 [Oryza sativa Japonica Group]
Length = 1631
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 61 SAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLN-TILECFGAPQSKK 119
+A+S L E+CAAN+WKPP F C+EEGP + + FT+KV EI+ + T+LEC + +K
Sbjct: 1543 TARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHSDGKLQK 1602
Query: 120 KTAAEHAAEGALWYLEHLGYFP 141
K A EHAA+GALW L+ LG+ P
Sbjct: 1603 KAAQEHAAQGALWCLKQLGHLP 1624
>gi|218195189|gb|EEC77616.1| hypothetical protein OsI_16596 [Oryza sativa Indica Group]
Length = 1576
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 61 SAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLN-TILECFGAPQSKK 119
+A+S L E+CAAN+WKPP F C+EEGP + + FT+KV EI+ + T+LEC + +K
Sbjct: 1488 TARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHSDGKLQK 1547
Query: 120 KTAAEHAAEGALWYLEHLGYFP 141
K A EHAA+GALW L+ LG+ P
Sbjct: 1548 KAAQEHAAQGALWCLKQLGHLP 1569
>gi|222629185|gb|EEE61317.1| hypothetical protein OsJ_15421 [Oryza sativa Japonica Group]
Length = 1632
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 61 SAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLN-TILECFGAPQSKK 119
+A+S L E+CAAN+WKPP F C+EEGP + + FT+KV EI+ + T+LEC + +K
Sbjct: 1544 TARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHSDGKLQK 1603
Query: 120 KTAAEHAAEGALWYLEHLGYFP 141
K A EHAA+GALW L+ LG+ P
Sbjct: 1604 KAAQEHAAQGALWCLKQLGHLP 1625
>gi|251764670|sp|A7LFZ6.1|DCL4_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 4; AltName:
Full=Dicer-like protein 4; Short=OsDCL4; AltName:
Full=Protein SHOOT ORGANIZATION 1
gi|152926631|gb|ABS32306.1| dicer-like protein [Oryza sativa Japonica Group]
Length = 1657
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 61 SAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLN-TILECFGAPQSKK 119
+A+S L E+CAAN+WKPP F C+EEGP + + FT+KV EI+ + T+LEC + +K
Sbjct: 1569 TARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHSDGKLQK 1628
Query: 120 KTAAEHAAEGALWYLEHLGYFP 141
K A EHAA+GALW L+ LG+ P
Sbjct: 1629 KAAQEHAAQGALWCLKQLGHLP 1650
>gi|32488296|emb|CAE03362.1| OSJNBb0065L13.5 [Oryza sativa Japonica Group]
gi|116311061|emb|CAH67991.1| OSIGBa0157K09-H0214G12.2 [Oryza sativa Indica Group]
Length = 1604
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 61 SAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLN-TILECFGAPQSKK 119
+A+S L E+CAAN+WKPP F C+EEGP + + FT+KV EI+ + T+LEC + +K
Sbjct: 1516 TARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHSDGKLQK 1575
Query: 120 KTAAEHAAEGALWYLEHLGYFP 141
K A EHAA+GALW L+ LG+ P
Sbjct: 1576 KAAQEHAAQGALWCLKQLGHLP 1597
>gi|215694849|dbj|BAG90040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1058
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 61 SAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLN-TILECFGAPQSKK 119
+A+S L E+CAAN+WKPP F C+EEGP + + FT+KV EI+ + T+LEC + +K
Sbjct: 970 TARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHSDGKLQK 1029
Query: 120 KTAAEHAAEGALWYLEHLGYFP 141
K A EHAA+GALW L+ LG+ P
Sbjct: 1030 KAAQEHAAQGALWCLKQLGHLP 1051
>gi|115459356|ref|NP_001053278.1| Os04g0509300 [Oryza sativa Japonica Group]
gi|113564849|dbj|BAF15192.1| Os04g0509300, partial [Oryza sativa Japonica Group]
Length = 1090
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 61 SAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLN-TILECFGAPQSKK 119
+A+S L E+CAAN+WKPP F C+EEGP + + FT+KV EI+ + T+LEC + +K
Sbjct: 1002 TARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHSDGKLQK 1061
Query: 120 KTAAEHAAEGALWYLEHLGYFP 141
K A EHAA+GALW L+ LG+ P
Sbjct: 1062 KAAQEHAAQGALWCLKQLGHLP 1083
>gi|449457995|ref|XP_004146733.1| PREDICTED: dicer-like protein 4-like [Cucumis sativus]
Length = 1657
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Query: 55 GAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESL-NTILECFG 113
G K +A+S+L+E+CAANHW PSFDC EEGP + K+FT+KV EIE +TI E FG
Sbjct: 1561 GRSGKTTARSRLYEVCAANHWNRPSFDCMNEEGPSHLKMFTYKVVLEIEEAPDTIFEFFG 1620
Query: 114 APQSKKKTAAEHAAEGALWYLEHLGYF 140
AP KKK AAEHAAE ALWYLE GY+
Sbjct: 1621 APHLKKKAAAEHAAEAALWYLEKGGYW 1647
>gi|449505410|ref|XP_004162460.1| PREDICTED: LOW QUALITY PROTEIN: dicer-like protein 4-like [Cucumis
sativus]
Length = 1228
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Query: 55 GAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEI-ESLNTILECFG 113
G K +A+S+L+E+CAANHW PSFDC EEGP + K+FT+KV EI E+ +TI E FG
Sbjct: 1132 GRSGKTTARSRLYEVCAANHWNRPSFDCMNEEGPSHLKMFTYKVVLEIEEAPDTIFEFFG 1191
Query: 114 APQSKKKTAAEHAAEGALWYLEHLGYF 140
AP KKK AAEHAAE ALWYLE GY+
Sbjct: 1192 APHLKKKAAAEHAAEAALWYLEKGGYW 1218
>gi|334187796|ref|NP_001190348.1| dicer-like protein 4 [Arabidopsis thaliana]
gi|332005448|gb|AED92831.1| dicer-like protein 4 [Arabidopsis thaliana]
Length = 1688
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
Query: 26 STSSVINNIETSGYDYEDDRFYEKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQE 85
S+S VI +DR +K G P+ +AKS LHE C AN WKPP F+CC+E
Sbjct: 1572 SSSYVIRRGLPQAPSKTEDRLPQKAIIKAGGPSSKTAKSLLHETCVANCWKPPHFECCEE 1631
Query: 86 EGPCYRKLFTFKVTFEIESL-NTILECFGAPQSKKKTAAEHAAEGALWYLEHLGYF 140
EGP + K F +KV E+E N LEC+G ++ KK AAEHAA+ A+W L+H G+
Sbjct: 1632 EGPGHLKSFVYKVILEVEDAPNMTLECYGEARATKKGAAEHAAQAAIWCLKHSGFL 1687
>gi|145358264|ref|NP_197532.3| dicer-like protein 4 [Arabidopsis thaliana]
gi|322510021|sp|P84634.2|DCL4_ARATH RecName: Full=Dicer-like protein 4
gi|73672051|gb|AAZ80387.1| dicer-like 4 [Arabidopsis thaliana]
gi|332005447|gb|AED92830.1| dicer-like protein 4 [Arabidopsis thaliana]
Length = 1702
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
Query: 26 STSSVINNIETSGYDYEDDRFYEKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQE 85
S+S VI +DR +K G P+ +AKS LHE C AN WKPP F+CC+E
Sbjct: 1586 SSSYVIRRGLPQAPSKTEDRLPQKAIIKAGGPSSKTAKSLLHETCVANCWKPPHFECCEE 1645
Query: 86 EGPCYRKLFTFKVTFEIESL-NTILECFGAPQSKKKTAAEHAAEGALWYLEHLGYF 140
EGP + K F +KV E+E N LEC+G ++ KK AAEHAA+ A+W L+H G+
Sbjct: 1646 EGPGHLKSFVYKVILEVEDAPNMTLECYGEARATKKGAAEHAAQAAIWCLKHSGFL 1701
>gi|218202148|gb|EEC84575.1| hypothetical protein OsI_31370 [Oryza sativa Indica Group]
Length = 180
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Query: 55 GAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNT-ILECFG 113
G + A+ +LH+IC+A HWK PS+D +E+GP + KLFT KVT +++ T I+EC
Sbjct: 94 GTTDNEPARLRLHKICSATHWKEPSYDF-EEQGPSHLKLFTCKVTIHVDTFTTTIVECIS 152
Query: 114 APQSKKKTAAEHAAEGALWYLEHLGY 139
P+ KK A EHAA+GALWYL+ G+
Sbjct: 153 EPKRSKKAAQEHAAQGALWYLKIFGH 178
>gi|215768941|dbj|BAH01170.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 180
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 55 GAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNT-ILECFG 113
G + A+ +LH+IC+A HWK PS+D +E+GP + KLFT KVT +++ T I+EC
Sbjct: 94 GTTDNEPARLRLHKICSATHWKEPSYDF-EEQGPSHLKLFTCKVTIHVDTFTTTIVECIS 152
Query: 114 APQSKKKTAAEHAAEGALWYLEHLGY 139
P KK A EHAA+GALWYL+ G+
Sbjct: 153 EPNRSKKAAQEHAAQGALWYLKIFGH 178
>gi|297812215|ref|XP_002873991.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319828|gb|EFH50250.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1693
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
Query: 26 STSSVINNIETSGYDYEDDRFYEKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQE 85
S+S VI +DR +K G P+ +AKS LHE C AN WKPP F+CC+E
Sbjct: 1578 SSSYVIRRGLPQAPSKTEDRLPQKTIIEAGRPSSKTAKSLLHETCVANCWKPPHFECCEE 1637
Query: 86 EGPCYRKLFTFKVTFEIESL-NTILECFGAPQSKKKTAAEHAAEGALWYLEHLGYF 140
EGP + K F +KV E+E N LEC+G ++ KK AAEHAA+ A+W L+H G+
Sbjct: 1638 EGPGHLKSFFYKVILEVEDAPNMTLECYGEARATKKGAAEHAAQAAIWCLKHSGFL 1693
>gi|224088236|ref|XP_002308384.1| dicer-like protein [Populus trichocarpa]
gi|222854360|gb|EEE91907.1| dicer-like protein [Populus trichocarpa]
Length = 1588
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
Query: 55 GAPNKV---SAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTI-LE 110
G P+KV +A+S+L EICAAN WKPPSF+CC EEGP + K FT+KV EIE + E
Sbjct: 1498 GQPSKVDLGTARSRLREICAANSWKPPSFECCTEEGPSHLKSFTYKVVVEIEEAPEMSFE 1557
Query: 111 CFGAPQSKKKTAAEHAAEGALWYLEH 136
C G+PQ KKK AAE AAEGALWYL+H
Sbjct: 1558 CVGSPQMKKKAAAEDAAEGALWYLKH 1583
>gi|50251545|dbj|BAD28919.1| hypothetical protein [Oryza sativa Japonica Group]
gi|50253009|dbj|BAD29259.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125605702|gb|EAZ44738.1| hypothetical protein OsJ_29369 [Oryza sativa Japonica Group]
Length = 122
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Query: 52 KNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNT-ILE 110
++ G + A+ +LH+IC+A HWK PS+D +E+GP + KLFT KVT +++ T I+E
Sbjct: 33 QSNGTTDNEPARLRLHKICSATHWKEPSYDF-EEQGPSHLKLFTCKVTIHVDTFTTTIVE 91
Query: 111 CFGAPQSKKKTAAEHAAEGALWYLEHLGY 139
C P KK A EHAA+GALWYL+ G+
Sbjct: 92 CISEPNRSKKAAQEHAAQGALWYLKIFGH 120
>gi|356557225|ref|XP_003546918.1| PREDICTED: dicer-like protein 4-like [Glycine max]
Length = 194
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 62/77 (80%)
Query: 59 KVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSK 118
K +A+S L+EICA N WKPP F+CC+EEGP ++++FTFKV EIE+ I+EC+GAP K
Sbjct: 105 KGTARSTLYEICAVNCWKPPIFECCKEEGPGHKRMFTFKVIIEIEASRNIIECYGAPHGK 164
Query: 119 KKTAAEHAAEGALWYLE 135
KK AA+HAAEGAL YL+
Sbjct: 165 KKAAADHAAEGALLYLK 181
>gi|212722406|ref|NP_001131481.1| Double-stranded RNA binding motif protein family [Zea mays]
gi|194691644|gb|ACF79906.1| unknown [Zea mays]
gi|195623306|gb|ACG33483.1| double-stranded RNA binding motif family protein [Zea mays]
gi|414885437|tpg|DAA61451.1| TPA: Double-stranded RNA binding motif protein family [Zea mays]
Length = 184
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 56 APNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESL-NTILECFGA 114
A SA S+L +IC A WK PSFD +E+GP + ++FT KVT ++ L NTI+ECF
Sbjct: 84 AKGNTSASSRLPKICKAAGWKEPSFDF-EEQGPPHNRIFTCKVTVHLDGLVNTIMECFSD 142
Query: 115 PQSKKKTAAEHAAEGALWYLEHLGYF 140
P+ KKK A E+AA+GALW LE GY
Sbjct: 143 PKPKKKAARENAAQGALWCLERSGYV 168
>gi|242076428|ref|XP_002448150.1| hypothetical protein SORBIDRAFT_06g022180 [Sorghum bicolor]
gi|241939333|gb|EES12478.1| hypothetical protein SORBIDRAFT_06g022180 [Sorghum bicolor]
Length = 698
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Query: 61 SAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLN-TILECFGAPQSKK 119
+A+S L+E+CAAN+WKPP F+ C+ EGP + + FT KV +I + T+LEC+ P+ +K
Sbjct: 611 TARSFLYELCAANYWKPPDFELCKGEGPSHLRKFTCKVLIQITGTSATLLECYSDPKLQK 670
Query: 120 KTAAEHAAEGALWYLEHLGYFP 141
K A EHAAEGALWYL+ LGY P
Sbjct: 671 KAAHEHAAEGALWYLKQLGYLP 692
>gi|30678641|ref|NP_849275.1| Double-stranded RNA-binding domain (DsRBD)-containing protein
[Arabidopsis thaliana]
gi|332656475|gb|AEE81875.1| Double-stranded RNA-binding domain (DsRBD)-containing protein
[Arabidopsis thaliana]
Length = 190
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
Query: 58 NKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEI--ESLNTILECFGAP 115
+ SAKS+L+ +C+ HWK P ++ E GPC+ K+FT KVT E+ +S T+LECFG P
Sbjct: 81 QRSSAKSQLYNLCSVRHWKAPLYEYIAE-GPCHMKIFTGKVTVEMKEDSRITVLECFGNP 139
Query: 116 QSKKKTAAEHAAEGALWYLEHLGY 139
Q KKK AAE AAE ALWYL+++GY
Sbjct: 140 QYKKKIAAEQAAEAALWYLKNVGY 163
>gi|30678637|ref|NP_191952.2| Double-stranded RNA-binding domain (DsRBD)-containing protein
[Arabidopsis thaliana]
gi|27754619|gb|AAO22755.1| unknown protein [Arabidopsis thaliana]
gi|28393927|gb|AAO42371.1| unknown protein [Arabidopsis thaliana]
gi|332656476|gb|AEE81876.1| Double-stranded RNA-binding domain (DsRBD)-containing protein
[Arabidopsis thaliana]
Length = 189
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
Query: 58 NKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEI--ESLNTILECFGAP 115
+ SAKS+L+ +C+ HWK P ++ E GPC+ K+FT KVT E+ +S T+LECFG P
Sbjct: 80 QRSSAKSQLYNLCSVRHWKAPLYEYIAE-GPCHMKIFTGKVTVEMKEDSRITVLECFGNP 138
Query: 116 QSKKKTAAEHAAEGALWYLEHLGY 139
Q KKK AAE AAE ALWYL+++GY
Sbjct: 139 QYKKKIAAEQAAEAALWYLKNVGY 162
>gi|186511390|ref|NP_001118902.1| Double-stranded RNA-binding domain (DsRBD)-containing protein
[Arabidopsis thaliana]
gi|332656477|gb|AEE81877.1| Double-stranded RNA-binding domain (DsRBD)-containing protein
[Arabidopsis thaliana]
Length = 168
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
Query: 58 NKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEI--ESLNTILECFGAP 115
+ SAKS+L+ +C+ HWK P ++ E GPC+ K+FT KVT E+ +S T+LECFG P
Sbjct: 59 QRSSAKSQLYNLCSVRHWKAPLYEYIAE-GPCHMKIFTGKVTVEMKEDSRITVLECFGNP 117
Query: 116 QSKKKTAAEHAAEGALWYLEHLGY 139
Q KKK AAE AAE ALWYL+++GY
Sbjct: 118 QYKKKIAAEQAAEAALWYLKNVGY 141
>gi|297844496|ref|XP_002890129.1| double-stranded RNA-binding domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297335971|gb|EFH66388.1| double-stranded RNA-binding domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 191
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Query: 59 KVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEI--ESLNTILECFGAPQ 116
+ SAKS+L++ C+ HWK P ++C E GPC+ LFT K T E+ +S T+LECFG PQ
Sbjct: 83 RSSAKSQLYKFCSVRHWKAPVYECIAE-GPCHMILFTVKATVEMKEDSRITVLECFGDPQ 141
Query: 117 SKKKTAAEHAAEGALWYLEHLGY 139
KKK AAE AAE ALWYL+++G+
Sbjct: 142 HKKKIAAEQAAEAALWYLKNVGH 164
>gi|242044684|ref|XP_002460213.1| hypothetical protein SORBIDRAFT_02g024705 [Sorghum bicolor]
gi|241923590|gb|EER96734.1| hypothetical protein SORBIDRAFT_02g024705 [Sorghum bicolor]
Length = 172
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 52 KNEGAPNKVS---AKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESL-NT 107
+N G N S A +L +IC WK P FD +E+GP + K F KVT ++ L NT
Sbjct: 79 QNSGQANGRSNEPASLRLLKICKVIGWKEPQFDF-EEQGPQHNKTFKCKVTVHLDGLLNT 137
Query: 108 ILECFGAPQSKKKTAAEHAAEGALWYLEHLGYF 140
I+ECF P +KK A E+AA+GALW L+ GY
Sbjct: 138 IMECFSKPNPRKKAARENAAQGALWCLQCSGYV 170
>gi|148907962|gb|ABR17101.1| unknown [Picea sitchensis]
Length = 685
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 61 SAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKK 120
SAKS L+E C W+ PS+ C QEEG ++K FT+ + N +EC G P K+
Sbjct: 607 SAKSSLNEFCQKKSWEVPSWVCYQEEGMPHQKSFTYMAVLRLPG-NISIECLGEPMKNKR 665
Query: 121 TAAEHAAEGALWYLEHLGYF 140
A E A+ GALW+L GY
Sbjct: 666 LAMESASRGALWWLNSQGYL 685
>gi|357158413|ref|XP_003578120.1| PREDICTED: uncharacterized protein LOC100838232 [Brachypodium
distachyon]
Length = 176
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 59 KVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESL-NTILECFGAPQS 117
+V+A++KL++ C+A WK P +D E+GP + LFT K T ++++ +TI+ECF +
Sbjct: 95 EVTARAKLNDFCSAIGWKYPKYDF-AEQGP-NKNLFTCKATVHVDAITDTIVECFSESKP 152
Query: 118 KKKTAAEHAAEGALWYLEHLGYF 140
+KK A E AA+G LW L LG+
Sbjct: 153 QKKAAREQAAQGILWCLRCLGHV 175
>gi|62320294|dbj|BAD94606.1| CAF protein [Arabidopsis thaliana]
Length = 690
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 38/80 (47%)
Query: 48 EKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNT 107
E E+ N+ ++ + L++IC +W PS+ C +E GP + K FTF V
Sbjct: 599 ENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTFGVRVNTSDRGW 658
Query: 108 ILECFGAPQSKKKTAAEHAA 127
EC G P K A + AA
Sbjct: 659 TDECIGEPMPSVKKAKDSAA 678
>gi|6715634|gb|AAF26461.1|AC007323_2 T25K16.4 [Arabidopsis thaliana]
Length = 2024
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 38/80 (47%)
Query: 48 EKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNT 107
E E+ N+ ++ + L++IC +W PS+ C +E GP + K FTF V
Sbjct: 1933 ENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTFGVRVNTSDRGW 1992
Query: 108 ILECFGAPQSKKKTAAEHAA 127
EC G P K A + AA
Sbjct: 1993 TDECIGEPMPSVKKAKDSAA 2012
>gi|6102610|gb|AAF03534.1|AF187317_1 CAF protein [Arabidopsis thaliana]
Length = 1909
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 38/80 (47%)
Query: 48 EKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNT 107
E E+ N+ ++ + L++IC +W PS+ C +E GP + K FTF V
Sbjct: 1818 ENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTFGVRVNTSDRGW 1877
Query: 108 ILECFGAPQSKKKTAAEHAA 127
EC G P K A + AA
Sbjct: 1878 TDECIGEPMPSVKKAKDSAA 1897
>gi|15223286|ref|NP_171612.1| endoribonuclease Dicer [Arabidopsis thaliana]
gi|34922211|sp|Q9SP32.2|DCL1_ARATH RecName: Full=Endoribonuclease Dicer homolog 1; AltName:
Full=Dicer-like protein 1; Short=AtDCL1; AltName:
Full=Protein ABNORMAL SUSPENSOR 1; AltName: Full=Protein
CARPEL FACTORY; AltName: Full=Protein SHORT INTEGUMENTS
1; AltName: Full=Protein SUSPENSOR 1
gi|11559645|gb|AAG38019.1|AF292940_1 short integuments 1 [Arabidopsis thaliana]
gi|11559647|gb|AAG38020.1|AF292941_1 short integuments 1 [Arabidopsis thaliana]
gi|332189099|gb|AEE27220.1| endoribonuclease Dicer [Arabidopsis thaliana]
Length = 1909
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 38/80 (47%)
Query: 48 EKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNT 107
E E+ N+ ++ + L++IC +W PS+ C +E GP + K FTF V
Sbjct: 1818 ENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTFGVRVNTSDRGW 1877
Query: 108 ILECFGAPQSKKKTAAEHAA 127
EC G P K A + AA
Sbjct: 1878 TDECIGEPMPSVKKAKDSAA 1897
>gi|334182203|ref|NP_001184881.1| endoribonuclease Dicer [Arabidopsis thaliana]
gi|332189100|gb|AEE27221.1| endoribonuclease Dicer [Arabidopsis thaliana]
Length = 1910
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 38/80 (47%)
Query: 48 EKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNT 107
E E+ N+ ++ + L++IC +W PS+ C +E GP + K FTF V
Sbjct: 1819 ENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTFGVRVNTSDRGW 1878
Query: 108 ILECFGAPQSKKKTAAEHAA 127
EC G P K A + AA
Sbjct: 1879 TDECIGEPMPSVKKAKDSAA 1898
>gi|374259482|gb|AEZ02177.1| Dicer [Arabidopsis thaliana]
Length = 1886
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 38/80 (47%)
Query: 48 EKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNT 107
E E+ N+ ++ + L++IC +W PS+ C +E GP + K FTF V
Sbjct: 1795 ENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTFGVRVNTSDRGW 1854
Query: 108 ILECFGAPQSKKKTAAEHAA 127
EC G P K A + AA
Sbjct: 1855 TDECIGEPMPSVKKAKDSAA 1874
>gi|297848414|ref|XP_002892088.1| hypothetical protein ARALYDRAFT_333551 [Arabidopsis lyrata subsp.
lyrata]
gi|297337930|gb|EFH68347.1| hypothetical protein ARALYDRAFT_333551 [Arabidopsis lyrata subsp.
lyrata]
Length = 1962
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 31/65 (47%)
Query: 63 KSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTA 122
+ L++IC +W PS+ C +E GP + K FTF V EC G P K A
Sbjct: 1886 RQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKA 1945
Query: 123 AEHAA 127
+ AA
Sbjct: 1946 KDSAA 1950
>gi|449478272|ref|XP_004155270.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog 1-like
[Cucumis sativus]
Length = 1987
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 34/80 (42%)
Query: 48 EKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNT 107
E K + N+ + L++IC +W P + C E GP + K FTF V
Sbjct: 1896 EDNGKKKKNGNQTFTRQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVNTTDKGW 1955
Query: 108 ILECFGAPQSKKKTAAEHAA 127
EC G P K A + AA
Sbjct: 1956 TDECVGEPMPSVKKAKDSAA 1975
>gi|449432976|ref|XP_004134274.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Cucumis sativus]
Length = 1986
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 34/80 (42%)
Query: 48 EKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNT 107
E K + N+ + L++IC +W P + C E GP + K FTF V
Sbjct: 1895 EDNGKKKKNGNQTFTRQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVNTTDKGW 1954
Query: 108 ILECFGAPQSKKKTAAEHAA 127
EC G P K A + AA
Sbjct: 1955 TDECVGEPMPSVKKAKDSAA 1974
>gi|357512663|ref|XP_003626620.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355501635|gb|AES82838.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 1965
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 48 EKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNT 107
EKE+KN N+ + L++IC +W P + C E GP + K FTF V
Sbjct: 1876 EKETKNG---NQTFTRQTLNDICLRRNWPMPFYRCVSEGGPAHAKRFTFAVRVNTTDKGW 1932
Query: 108 ILECFGAPQSKKKTAAEHAA 127
EC G K A + AA
Sbjct: 1933 TDECVGEAMPSVKKAKDSAA 1952
>gi|87240866|gb|ABD32724.1| Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease
III, bacterial [Medicago truncatula]
Length = 1939
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 48 EKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNT 107
EKE+KN N+ + L++IC +W P + C E GP + K FTF V
Sbjct: 1850 EKETKNG---NQTFTRQTLNDICLRRNWPMPFYRCVSEGGPAHAKRFTFAVRVNTTDKGW 1906
Query: 108 ILECFGAPQSKKKTAAEHAA 127
EC G K A + AA
Sbjct: 1907 TDECVGEAMPSVKKAKDSAA 1926
>gi|356504203|ref|XP_003520888.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
Length = 1944
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 31/70 (44%)
Query: 58 NKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQS 117
N+ + L++IC +W P + C E GP + K FTF V EC G P
Sbjct: 1863 NQTFTRQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVNTTDRGWTDECVGEPMP 1922
Query: 118 KKKTAAEHAA 127
K A + AA
Sbjct: 1923 SVKKAKDSAA 1932
>gi|356571277|ref|XP_003553805.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
Length = 1942
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 31/70 (44%)
Query: 58 NKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQS 117
N+ + L++IC +W P + C E GP + K FTF V EC G P
Sbjct: 1861 NQTFTRQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVNTTDKGWTDECVGEPMP 1920
Query: 118 KKKTAAEHAA 127
K A + AA
Sbjct: 1921 SVKKAKDSAA 1930
>gi|225453660|ref|XP_002268369.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Vitis vinifera]
Length = 1971
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Query: 49 KESKNEGAPNKVSA-----KSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE 103
KE +E K + + L++IC +W P + C E GP + K FTF V
Sbjct: 1876 KEGDDENGKKKKNGSQTFTRQTLNDICLRRNWPMPVYRCVNEGGPAHAKRFTFAVRVNTN 1935
Query: 104 SLNTILECFGAPQSKKKTAAEHAA 127
EC G P K A + AA
Sbjct: 1936 DKGWTDECIGEPMPSVKKAKDSAA 1959
>gi|6049868|gb|AAF02783.1|AF195115_3 contains regions of weak similarity to immunoglobulin heavy chain
variable region [Arabidopsis thaliana]
gi|2252826|gb|AAB62825.1| contains regions of weak similarity to immunoglobulin heavy chain
variable region [Arabidopsis thaliana]
gi|7267129|emb|CAB80800.1| hypothetical protein [Arabidopsis thaliana]
Length = 182
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 90 YRKLFTFKVTFEI--ESLNTILECFGAPQSKKKTAAEHAAEGALWYLEHLGY 139
Y F KVT E+ +S T+LECFG PQ KKK AAE AAE ALWYL+++GY
Sbjct: 104 YVSFFWGKVTVEMKEDSRITVLECFGNPQYKKKIAAEQAAEAALWYLKNVGY 155
>gi|443427939|pdb|2LRS|A Chain A, The Second Dsrbd Domain From A. Thaliana Dicer-like 1
Length = 71
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%)
Query: 67 HEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTAAEHA 126
++IC +W PS+ C +E GP + K FTF V EC G P K A + A
Sbjct: 1 NDICLRKNWPMPSYRCVKEGGPAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSA 60
Query: 127 A 127
A
Sbjct: 61 A 61
>gi|296089026|emb|CBI38729.3| unnamed protein product [Vitis vinifera]
Length = 227
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Query: 63 KSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTA 122
+ L++IC +W P + C E GP + K FTF V EC G P K A
Sbjct: 151 RQTLNDICLRRNWPMPVYRCVNEGGPAHAKRFTFAVRVNTNDKGWTDECIGEPMPSVKKA 210
Query: 123 AEHAAEGAL-----WY 133
+ AA L WY
Sbjct: 211 KDSAAVLLLELLNKWY 226
>gi|125584735|gb|EAZ25399.1| hypothetical protein OsJ_09217 [Oryza sativa Japonica Group]
Length = 1883
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 42 EDDRFYEKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFE 101
ED+R + E KN GA ++ + L++IC W P + C E GP + K F + V
Sbjct: 1783 EDER--DGEKKN-GA--QMFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKRFVYSVRVN 1837
Query: 102 IESLNTILECFGAPQSKKKTAAEHAA 127
EC G P K A + AA
Sbjct: 1838 TSDRGWTDECIGEPMPSVKKAKDSAA 1863
>gi|125542181|gb|EAY88320.1| hypothetical protein OsI_09779 [Oryza sativa Indica Group]
Length = 1883
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 42 EDDRFYEKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFE 101
ED+R + E KN GA ++ + L++IC W P + C E GP + K F + V
Sbjct: 1783 EDER--DGEKKN-GA--QMFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKRFVYSVRVN 1837
Query: 102 IESLNTILECFGAPQSKKKTAAEHAA 127
EC G P K A + AA
Sbjct: 1838 TSDRGWTDECIGEPMPSVKKAKDSAA 1863
>gi|75330224|sp|Q8LMR2.1|DCL1_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 1; AltName:
Full=Dicer-like protein 1; Short=OsDCL1
gi|21426125|gb|AAM52322.1|AC105363_11 Putative CAF protein [Oryza sativa Japonica Group]
gi|108705906|gb|ABF93701.1| DEAD/DEAH box helicase carpel factory, putative, expressed [Oryza
sativa Japonica Group]
Length = 1883
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 42 EDDRFYEKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFE 101
ED+R + E KN GA ++ + L++IC W P + C E GP + K F + V
Sbjct: 1783 EDER--DGEKKN-GA--QMFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKRFVYSVRVN 1837
Query: 102 IESLNTILECFGAPQSKKKTAAEHAA 127
EC G P K A + AA
Sbjct: 1838 TSDRGWTDECIGEPMPSVKKAKDSAA 1863
>gi|297600250|ref|NP_001048796.2| Os03g0121800 [Oryza sativa Japonica Group]
gi|255674167|dbj|BAF10710.2| Os03g0121800, partial [Oryza sativa Japonica Group]
Length = 165
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 42 EDDRFYEKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFE 101
ED+R EK++ GA ++ + L++IC W P + C E GP + K F + V
Sbjct: 65 EDERDGEKKN---GA--QMFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKRFVYSVRVN 119
Query: 102 IESLNTILECFGAPQSKKKTAAEHAAEGALWYLEHLGY-FP 141
EC G P K A + A A+ LE L FP
Sbjct: 120 TSDRGWTDECIGEPMPSVKKAKDSA---AVLLLELLNRDFP 157
>gi|51245097|ref|YP_064981.1| ribonuclease III [Desulfotalea psychrophila LSv54]
gi|81642476|sp|Q6ANV0.1|RNC_DESPS RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|50876134|emb|CAG35974.1| related to ribonuclease III [Desulfotalea psychrophila LSv54]
Length = 241
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 62 AKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKT 121
AKS+L EI H + PS+ EEGP ++K FT V F E L T G SKK+
Sbjct: 172 AKSRLQEILQEKHNEGPSYRLDNEEGPSHKKRFTISVLFRDEVLGT-----GEAGSKKEA 226
Query: 122 AAEHAA 127
AA
Sbjct: 227 EQRGAA 232
>gi|168021275|ref|XP_001763167.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
gi|162685650|gb|EDQ72044.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
Length = 961
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 49 KESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTI 108
K SKN G N + ++++C W P + C E GP + K FTF V +
Sbjct: 765 KSSKN-GHTN--FTRKTINDLCLKRQWPMPQYKCVLESGPAHAKKFTFSVRVLTTTDGWT 821
Query: 109 LECFGAPQSKKKTAAEHAA 127
EC G P + K A + AA
Sbjct: 822 EECVGEPMASVKKAKDSAA 840
>gi|255548081|ref|XP_002515097.1| dicer-1, putative [Ricinus communis]
gi|223545577|gb|EEF47081.1| dicer-1, putative [Ricinus communis]
Length = 1543
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 29/65 (44%)
Query: 63 KSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTA 122
+ L++IC +W P + C E GP + K FTF V EC G P K A
Sbjct: 1467 RQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVNTTDRGWTDECVGEPMPSVKKA 1526
Query: 123 AEHAA 127
+ AA
Sbjct: 1527 KDSAA 1531
>gi|357129531|ref|XP_003566415.1| PREDICTED: ribonuclease 3-like protein 2-like [Brachypodium
distachyon]
Length = 366
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 63 KSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTA 122
K KL+E C+ HW P F +E+GP + + FT+ V ++E+ G P SK K A
Sbjct: 294 KQKLNEQCSRKHWPKPIFKLEKEDGPAHERKFTYSV--QVETDGGTFVTIGDPMSKVKDA 351
Query: 123 AEHAAEGALWYLEHL 137
A+ L L L
Sbjct: 352 ENSGAQKMLEVLLKL 366
>gi|357114316|ref|XP_003558946.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Brachypodium
distachyon]
Length = 1888
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Query: 48 EKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNT 107
+ + K GA V + L++IC W P + C E GP + K F + V
Sbjct: 1791 KDDDKKNGA--HVFTRQTLNDICLRRQWPMPQYRCINEGGPAHAKRFVYAVRVNTSDRGW 1848
Query: 108 ILECFGAPQSKKKTAAEHAAEGALWYLEHLGYFP 141
EC G P K A + AA L L G FP
Sbjct: 1849 TDECIGEPMPSVKKAKDSAAVLLLELLN--GSFP 1880
>gi|414864448|tpg|DAA43005.1| TPA: hypothetical protein ZEAMMB73_941906 [Zea mays]
Length = 1307
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Query: 42 EDDRFYEKESKNEGAPNKVS--AKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVT 99
E + +K+++ +G S + L++IC W P + C E GP + K F + V
Sbjct: 1202 EKETAAKKDTEKDGEKKNGSQFTRQTLNDICLRRQWPMPQYRCINEGGPAHAKRFVYAVR 1261
Query: 100 FEIESLNTILECFGAPQSKKKTAAEHAA 127
EC G P K A + AA
Sbjct: 1262 VNTSDSGWTDECIGEPMPSVKKAKDSAA 1289
>gi|242037143|ref|XP_002465966.1| hypothetical protein SORBIDRAFT_01g049110 [Sorghum bicolor]
gi|241919820|gb|EER92964.1| hypothetical protein SORBIDRAFT_01g049110 [Sorghum bicolor]
Length = 178
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 63 KSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTA 122
+ L++IC W P + C E GP + K F + V EC G P K A
Sbjct: 96 RQTLNDICLRRQWPMPQYRCINEGGPAHAKRFVYAVRVNTSDRGWTDECIGEPMPSVKKA 155
Query: 123 AEHAA 127
+ AA
Sbjct: 156 KDSAA 160
>gi|260835242|ref|XP_002612618.1| hypothetical protein BRAFLDRAFT_219680 [Branchiostoma floridae]
gi|229297996|gb|EEN68627.1| hypothetical protein BRAFLDRAFT_219680 [Branchiostoma floridae]
Length = 331
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLN 106
S L EIC W PP F + GP ++K F FKV E++SL+
Sbjct: 287 SALMEICNKRKWMPPEFVLVHDSGPDHKKNFLFKVLSELDSLS 329
>gi|293334879|ref|NP_001167729.1| uncharacterized protein LOC100381417 [Zea mays]
gi|223943645|gb|ACN25906.1| unknown [Zea mays]
Length = 178
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 63 KSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTA 122
+ L++IC W P + C E GP + K F + V EC G P K A
Sbjct: 96 RQTLNDICLRRQWPMPQYRCINEGGPAHAKRFVYAVRVNTSDSGWTDECIGEPMPSVKKA 155
Query: 123 AEHAA 127
+ AA
Sbjct: 156 KDSAA 160
>gi|444721324|gb|ELW62066.1| Protein SON [Tupaia chinensis]
Length = 798
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTAA 123
S L EIC W+PP F + GP +RK F F+V + F +P K
Sbjct: 713 SALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLINGSAYQP---SFASPNKK----- 764
Query: 124 EHA-AEGALWYLEHLGYFP 141
HA A A L+ +G P
Sbjct: 765 -HAKATAATVVLQAMGLVP 782
>gi|110520367|gb|ABG74922.1| Dicer-like 1b protein [Physcomitrella patens]
Length = 1695
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 49 KESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTI 108
K SKN G N + ++++C W P + C E GP + K FT V +
Sbjct: 1600 KSSKN-GHTN--FTRKTINDLCLKRQWPMPQYKCVLESGPAHAKKFTLSVRVLTTTDGWT 1656
Query: 109 LECFGAPQSKKKTAAEHAA 127
EC G P + K A + AA
Sbjct: 1657 EECVGEPMASVKKAKDSAA 1675
>gi|357465903|ref|XP_003603236.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355492284|gb|AES73487.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 1758
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 63 KSKLHEICAANHWKPPSFD------------CCQEEGPCYRKLFTFKVTFEIESLNTILE 110
+S+L+E+C W PSFD C EG F K+T I I +
Sbjct: 1641 RSELYEVCKKKLWPLPSFDSTEYKDRTLFESCKGLEGSKGLNCFVSKITLGIPGYGDI-K 1699
Query: 111 CFGAPQSKKKTAAEHAAEGALWYLEHLGYFPIR 143
C G +S KK++ + AA AL+ L+ LG I+
Sbjct: 1700 CQGEARSDKKSSYDSAAVQALYELQRLGKIMIK 1732
>gi|157285009|gb|ABV31244.1| dicer-like 1 [Physcomitrella patens]
Length = 1662
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 48 EKESKNEGAPNKVSAKS--------KLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVT 99
+ E++N A N S+K+ L+++C W P + C E GP + K FTF V
Sbjct: 1565 KSEAENSEANNGKSSKNGHTNFTRQTLNDLCLKRQWPMPQYRCVLEGGPAHAKKFTFSVR 1624
Query: 100 FEIESLNTILECFGAPQSKKKTAAE 124
+ EC G P K A +
Sbjct: 1625 VLTTTDGWTEECVGDPMPSVKKAKD 1649
>gi|414885438|tpg|DAA61452.1| TPA: hypothetical protein ZEAMMB73_614985 [Zea mays]
gi|414885439|tpg|DAA61453.1| TPA: hypothetical protein ZEAMMB73_614985 [Zea mays]
Length = 48
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 109 LECFGAPQSKKKTAAEHAAEGALWYLEHLGYF 140
+ECF P+ KKK A E+AA+GALW LE GY
Sbjct: 1 MECFSDPKPKKKAARENAAQGALWCLERSGYV 32
>gi|168010516|ref|XP_001757950.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
gi|162690827|gb|EDQ77192.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
Length = 1662
Score = 43.1 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 48 EKESKNEGAPNKVSAKS--------KLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVT 99
+ E++N A N S+K+ L+++C W P + C E GP + K FTF V
Sbjct: 1565 KSEAENSEANNGKSSKNGHTNFTRQTLNDLCLKRQWPMPQYRCVLEGGPAHAKKFTFSVR 1624
Query: 100 FEIESLNTILECFGAPQSKKKTAAE 124
+ EC G P K A +
Sbjct: 1625 VLTTTDGWTEECVGDPMPSVKKAKD 1649
>gi|317506412|ref|ZP_07964217.1| ribonuclease III [Segniliparus rugosus ATCC BAA-974]
gi|316255292|gb|EFV14557.1| ribonuclease III [Segniliparus rugosus ATCC BAA-974]
Length = 347
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 63 KSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTA 122
K+ L E+CA +PP ++ E GP + KLFT V E +SL T G+ ++KK+
Sbjct: 271 KTSLQELCARRGLRPPVYEVA-EAGPDHEKLFTAVVLIEEKSLGT-----GSGRTKKE-- 322
Query: 123 AEHAAEGALW 132
AE A G W
Sbjct: 323 AEMKAAGHAW 332
>gi|390364358|ref|XP_797285.3| PREDICTED: uncharacterized protein LOC592681 [Strongylocentrotus
purpuratus]
Length = 1573
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 66 LHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFE-IESLNTILECFGAPQSKKKTAAE 124
L+E+C W P+F+ +E+GP ++K F FKV E + T+ C G + K AA
Sbjct: 1505 LNELCNKRRWGKPNFEVVREDGPPHKKNFVFKVCIRNDEYIPTV--CSGNKKDAKAMAAT 1562
Query: 125 HAAEGALWYLEHLGYFP 141
A L+ +G P
Sbjct: 1563 VA-------LQKMGLLP 1572
>gi|297794783|ref|XP_002865276.1| hypothetical protein ARALYDRAFT_494464 [Arabidopsis lyrata subsp.
lyrata]
gi|297311111|gb|EFH41535.1| hypothetical protein ARALYDRAFT_494464 [Arabidopsis lyrata subsp.
lyrata]
Length = 892
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 33/74 (44%)
Query: 62 AKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKT 121
+ KL EIC N W P F +E GP + F V EI ++ G +SKKK
Sbjct: 247 GRGKLIEICTKNKWPRPIFSVEEERGPKNEQKFVCSVKIEIPNIEGSFHMKGDAKSKKKQ 306
Query: 122 AAEHAAEGALWYLE 135
A +A + LE
Sbjct: 307 AENSSAYHMIRALE 320
>gi|296393287|ref|YP_003658171.1| ribonuclease III [Segniliparus rotundus DSM 44985]
gi|296180434|gb|ADG97340.1| ribonuclease III [Segniliparus rotundus DSM 44985]
Length = 338
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 63 KSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTA 122
K+ L E+CA +PP ++ E GP + KLFT V E +SL T G+ ++KK+
Sbjct: 262 KTSLQELCARRGLRPPVYEVT-EAGPDHEKLFTAVVLIEEKSLGT-----GSGRTKKE-- 313
Query: 123 AEHAAEGALW 132
AE A G W
Sbjct: 314 AEMKAAGHAW 323
>gi|379987676|gb|AFD22618.1| dicer-like 1 protein, partial [Nicotiana attenuata]
Length = 1690
Score = 42.0 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 2/94 (2%)
Query: 34 IETSGYDYEDDRFYEKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKL 93
+E G + R K G P+ + L++IC +W P + E GP + K
Sbjct: 1587 VEKRGRKPKLRRLKMGRKKKNGNPS--YTRQTLNDICLRRNWPMPLYRSVHEGGPAHAKR 1644
Query: 94 FTFKVTFEIESLNTILECFGAPQSKKKTAAEHAA 127
FT+ V EC G P K A + AA
Sbjct: 1645 FTYGVRVNTSDKGWTDECIGEPMPSVKKAKDSAA 1678
>gi|17046379|gb|AAL34500.1|AF380182_1 SON DNA binding protein isoform D [Homo sapiens]
Length = 147
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTAA 123
S L EIC W+PP F + GP +RK F F+V + F +P K
Sbjct: 62 SALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLINGSAYQP---SFASPNKK----- 113
Query: 124 EHA-AEGALWYLEHLGYFP 141
HA A A L+ +G P
Sbjct: 114 -HAKATAATVVLQAMGLVP 131
>gi|302815180|ref|XP_002989272.1| hypothetical protein SELMODRAFT_129431 [Selaginella moellendorffii]
gi|300143015|gb|EFJ09710.1| hypothetical protein SELMODRAFT_129431 [Selaginella moellendorffii]
Length = 524
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 62 AKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKT 121
++ LHE+C+ W P ++ E GP + K+FT + IE EC G P+
Sbjct: 450 SRQALHELCSQRGWPCPDYNTHSETGPAHAKMFTCTASVRIEQ-GEKQECIGQPRPTINK 508
Query: 122 AAEHAAEGALWYLE 135
A + AA + L+
Sbjct: 509 AKDSAARMLMETLQ 522
>gi|302764440|ref|XP_002965641.1| hypothetical protein SELMODRAFT_84784 [Selaginella moellendorffii]
gi|300166455|gb|EFJ33061.1| hypothetical protein SELMODRAFT_84784 [Selaginella moellendorffii]
Length = 524
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 51 SKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILE 110
S+ E A + S + LHE+C+ W P ++ E GP + K+FT + IE E
Sbjct: 440 SQEEKASGEFS-RQALHELCSQRGWPCPDYNTHSETGPAHAKMFTCTASVRIEQ-GEKQE 497
Query: 111 CFGAPQSKKKTAAEHAAEGALWYLE 135
C G P+ A + AA + L+
Sbjct: 498 CIGQPRPTINKAKDSAARVLMETLQ 522
>gi|443698431|gb|ELT98408.1| hypothetical protein CAPTEDRAFT_158003 [Capitella teleta]
Length = 385
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
S L E+C W P+FD E GP +RK+F FK
Sbjct: 313 SALMELCKRRRWATPTFDQVSEHGPPHRKMFLFKA 347
>gi|15242329|ref|NP_199328.1| RNAse THREE-like protein 3 [Arabidopsis thaliana]
gi|75171238|sp|Q9FKF0.1|RTL3_ARATH RecName: Full=Ribonuclease 3-like protein 3; AltName:
Full=Ribonuclease III-like protein 3; Short=RNase
III-like protein 3; AltName: Full=Ribonuclease
three-like protein 3
gi|9759600|dbj|BAB11388.1| unnamed protein product [Arabidopsis thaliana]
gi|332007827|gb|AED95210.1| RNAse THREE-like protein 3 [Arabidopsis thaliana]
Length = 957
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 60 VSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKK 119
V+ + +L EIC N W P F +E+GP F V EI ++ G +SKK
Sbjct: 306 VNGRGELIEICTKNKWPRPIFSVQEEKGPKNEPKFVCSVKIEIPNIEGTFHMKGDIKSKK 365
Query: 120 KTAAEHAAEGALWYLE-HLGYFPIRKLKK 147
K A A + LE L I L+K
Sbjct: 366 KQAENSLAYHMIRALESSLVSLVISNLQK 394
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 31/73 (42%)
Query: 63 KSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTA 122
K KL EICA N W P F +E G + V EI ++ G + KK A
Sbjct: 839 KGKLFEICAKNKWPNPIFSVEEERGQQNEQKIVCSVKIEIPNIEGTFHIKGDAKPTKKEA 898
Query: 123 AEHAAEGALWYLE 135
+A+ + LE
Sbjct: 899 ENSSADHMIRALE 911
>gi|356552945|ref|XP_003544820.1| PREDICTED: ribonuclease 3-like protein 2-like [Glycine max]
Length = 345
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 63 KSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTA 122
K+KL E+CA W P + ++ GP + K F V +I + + IL+ G +S+ K A
Sbjct: 270 KNKLRELCAVKKWPIPEYIIEKDSGPSHEKKFVCAV--QIPTADGILQMSGDEKSRVKDA 327
Query: 123 AEHAAEGALWYLEHLGYF 140
AA + L+ Y
Sbjct: 328 ENSAASLMIRALQQYNYL 345
>gi|451945747|ref|YP_007466342.1| ribonuclease III [Desulfocapsa sulfexigens DSM 10523]
gi|451905095|gb|AGF76689.1| ribonuclease III [Desulfocapsa sulfexigens DSM 10523]
Length = 245
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 62 AKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKT 121
AKS+L E + PS+ +EEGP ++K+FT V F E+L + S KK
Sbjct: 170 AKSRLQEALQEKFNEAPSYRIDEEEGPSHQKIFTVSVLFREEALGS------GTGSSKKE 223
Query: 122 AAEHAAEGALWYLEHL 137
A + AA L L+ +
Sbjct: 224 AEQRAAATTLDSLDDV 239
>gi|198423460|ref|XP_002126266.1| PREDICTED: similar to SON DNA-binding protein [Ciona intestinalis]
Length = 140
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTAA 123
S L EIC+ W P+F GP +++ F FKVT + P KK A
Sbjct: 68 SALMEICSKRKWSQPNFQLVHNSGPDHQRFFMFKVTINGQEYQP-----STPSVNKKLAK 122
Query: 124 EHAAEGALWYLEHLGYFP 141
++A A L+ +G P
Sbjct: 123 ANSASVA---LQGMGLIP 137
>gi|357118476|ref|XP_003560980.1| PREDICTED: ribonuclease 3-like protein 2-like [Brachypodium
distachyon]
Length = 360
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 63 KSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTA 122
K KL+E C+ HW P F +E+GP + + F + V E+E+ N G P S+ K A
Sbjct: 286 KQKLNEQCSKKHWPKPIFKLEKEDGPAHDRKFMYSV--EVETQNGTYFARGDPMSRVKYA 343
>gi|321468839|gb|EFX79822.1| hypothetical protein DAPPUDRAFT_224986 [Daphnia pulex]
Length = 724
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
S LHE+C +HW+PP F+ + GP + K F FKV
Sbjct: 673 SILHELCTKHHWEPPVFEQVLDIGPDHLKHFLFKV 707
>gi|326913278|ref|XP_003202966.1| PREDICTED: hypothetical protein LOC100542052 [Meleagris gallopavo]
Length = 847
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 19/35 (54%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
S L EIC W PP F + GP +RK F FKV
Sbjct: 762 SALMEICNKRRWSPPEFVLVDDSGPDHRKHFIFKV 796
>gi|255577153|ref|XP_002529460.1| ribonuclease III, putative [Ricinus communis]
gi|223531076|gb|EEF32926.1| ribonuclease III, putative [Ricinus communis]
Length = 342
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 62 AKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKT 121
AK KLHE+C W P+++ +E GP + K + V +I +++ +L G + + K
Sbjct: 266 AKRKLHELCGKKKWPKPTYNIEKETGPSHEKKYVCSV--QIATVDGVLYMRGDEKMRVKE 323
Query: 122 AAEHAAEGALWYLEHLGYF 140
A AA + L+ Y
Sbjct: 324 ADNSAASLMIRALQESNYL 342
>gi|297609477|ref|NP_001063177.2| Os09g0416400 [Oryza sativa Japonica Group]
gi|255678898|dbj|BAF25091.2| Os09g0416400 [Oryza sativa Japonica Group]
Length = 131
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 55 GAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKL 93
G + A+ +LH+IC+A HWK PS+D +E+GP + KL
Sbjct: 94 GTTDNEPARLRLHKICSATHWKEPSYD-FEEQGPSHLKL 131
>gi|193627224|ref|XP_001952647.1| PREDICTED: hypothetical protein LOC100161769 [Acyrthosiphon pisum]
Length = 732
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTAA 123
S L+E CA W P F+ E GP +RK F V +N + C Q+KK
Sbjct: 660 SLLNEFCAKRKWDIPKFNTLDESGPSHRKTFIMTVV-----VNGVQYCSSRCQTKKLAKM 714
Query: 124 EHAAE 128
E A E
Sbjct: 715 EAAKE 719
>gi|225460893|ref|XP_002278706.1| PREDICTED: ribonuclease 3-like protein 2-like [Vitis vinifera]
Length = 364
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 62 AKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKT 121
AK KLHE C+ W PS+ +E GP + K F V IE+++ +L G + + K
Sbjct: 288 AKQKLHEFCSKKKWPKPSYRIEKEVGPAHEKGFLCSV--HIETVDGVLVMQGDTKPRVKD 345
Query: 122 AAEHAA 127
A AA
Sbjct: 346 AENSAA 351
>gi|297737474|emb|CBI26675.3| unnamed protein product [Vitis vinifera]
Length = 337
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 62 AKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKT 121
AK KLHE C+ W PS+ +E GP + K F V IE+++ +L G + + K
Sbjct: 261 AKQKLHEFCSKKKWPKPSYRIEKEVGPAHEKGFLCSV--HIETVDGVLVMQGDTKPRVKD 318
Query: 122 AAEHAA 127
A AA
Sbjct: 319 AENSAA 324
>gi|297794785|ref|XP_002865277.1| hypothetical protein ARALYDRAFT_917014 [Arabidopsis lyrata subsp.
lyrata]
gi|297311112|gb|EFH41536.1| hypothetical protein ARALYDRAFT_917014 [Arabidopsis lyrata subsp.
lyrata]
Length = 786
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 33/73 (45%)
Query: 63 KSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTA 122
K KLH+IC N W P + +E GP + F V EI ++ G + KKK A
Sbjct: 366 KGKLHKICVKNKWPFPIYRIEEERGPKNEQKFVCSVKIEIPNIEGSFHMKGDAKPKKKEA 425
Query: 123 AEHAAEGALWYLE 135
+A + LE
Sbjct: 426 ENSSAYHMIRALE 438
>gi|355721229|gb|AES07195.1| SON DNA binding protein [Mustela putorius furo]
Length = 72
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 18 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 72
>gi|371943894|gb|AEX61722.1| putative ribonuclease 3 [Megavirus courdo7]
Length = 210
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 53 NEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECF 112
+E A N+ + K + ++ NHW P + QE+GP ++K FT + LN L
Sbjct: 130 DEIAENETNYKDLVLQLYNKNHWGHPIYKIIQEKGPDHKKKFTMGIY-----LNDKLMGR 184
Query: 113 GAPQSKKKTAAEHAAEGALW 132
G SKKK AE A ++
Sbjct: 185 GTAYSKKK--AEQIASKRMY 202
>gi|17506341|ref|NP_491200.1| Protein D1037.1 [Caenorhabditis elegans]
gi|351060633|emb|CCD68348.1| Protein D1037.1 [Caenorhabditis elegans]
Length = 786
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTAA 123
S + E+CA W PPSF C+E G + K+F + + I + P K
Sbjct: 709 SLIMELCAKRRWNPPSF-SCEESGADHLKMFVWTI--------VINDVEYRPMCGSKQKK 759
Query: 124 EHAAEGALWYLEHLGYFPI 142
E A A L+ LG P+
Sbjct: 760 EGKAVAAQVALQSLGVLPM 778
>gi|26330460|dbj|BAC28960.1| unnamed protein product [Mus musculus]
Length = 119
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
S L EIC W+PP F + GP +RK F F+V
Sbjct: 67 SALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 101
>gi|324502539|gb|ADY41117.1| Protein SON [Ascaris suum]
Length = 1051
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTF 100
S L E+C+ HW PP F C E GP + FT+K
Sbjct: 977 SMLMELCSKKHWPPPQFTCI-ESGPSNNRRFTWKAVV 1012
>gi|302765743|ref|XP_002966292.1| hypothetical protein SELMODRAFT_86110 [Selaginella moellendorffii]
gi|300165712|gb|EFJ32319.1| hypothetical protein SELMODRAFT_86110 [Selaginella moellendorffii]
Length = 1730
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 30/79 (37%)
Query: 49 KESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTI 108
K +K E + L++IC W P + E GP + K FT+ V
Sbjct: 1631 KVAKMENEKANAFTRQTLNDICLQRQWPMPQYRLLSESGPAHAKRFTYTVRVNTRERGWT 1690
Query: 109 LECFGAPQSKKKTAAEHAA 127
EC G K A + AA
Sbjct: 1691 DECEGQAMPSMKKAKDSAA 1709
>gi|157107592|ref|XP_001649849.1| hypothetical protein AaeL_AAEL004808 [Aedes aegypti]
gi|108879546|gb|EAT43771.1| AAEL004808-PA [Aedes aegypti]
Length = 919
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
S L E C+ W PP +D E GP + K F FKV
Sbjct: 849 SILGEYCSKRKWMPPRYDLVHESGPGHAKNFVFKV 883
>gi|406982720|gb|EKE04003.1| hypothetical protein ACD_20C00120G0004 [uncultured bacterium]
Length = 241
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 58 NKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQS 117
+K + K+ L E AN + P +D +EEGP + K+F V ++L G+ +S
Sbjct: 163 SKYNFKAMLQEYTQANELELPVYDVVKEEGPPHNKVFEVAVVINDKTLG-----IGSGKS 217
Query: 118 KKKTAAEHAAEGALWYL 134
KK+ A + +AE A+ L
Sbjct: 218 KKE-AQQKSAEQAVIKL 233
>gi|302793023|ref|XP_002978277.1| hypothetical protein SELMODRAFT_108314 [Selaginella moellendorffii]
gi|300154298|gb|EFJ20934.1| hypothetical protein SELMODRAFT_108314 [Selaginella moellendorffii]
Length = 1728
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 30/79 (37%)
Query: 49 KESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTI 108
K +K E + L++IC W P + E GP + K FT+ V
Sbjct: 1631 KVTKMENDKANAFTRQTLNDICLQRQWPMPQYRLLSESGPAHAKRFTYTVRVNTRERGWT 1690
Query: 109 LECFGAPQSKKKTAAEHAA 127
EC G K A + AA
Sbjct: 1691 DECEGQAMPSMKKAKDSAA 1709
>gi|431894718|gb|ELK04511.1| Protein SON [Pteropus alecto]
Length = 2343
Score = 38.9 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE 103
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2238 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLINGS 2297
Query: 104 SLNTILECFGAPQSK--KKTAA 123
+ F +P K K TAA
Sbjct: 2298 AYQP---SFASPNKKHAKATAA 2316
>gi|148709768|gb|EDL41714.1| mCG1979, isoform CRA_b [Mus musculus]
Length = 767
Score = 38.9 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 16/105 (15%)
Query: 40 DYEDDRFYEKESKNEGAP-NKVSAKSK--------LHEICAANHWKPPSFDCCQEEGPCY 90
D +D+ Y+ E P N VS K + L EIC N+W P + G
Sbjct: 588 DKREDKLYDLLPGMELTPMNTVSLKPQGIKLAPQILEEICQKNNWGQPVYQLHSAIGQDQ 647
Query: 91 RKLFTFKVTF-EIESLNTILECFGAPQ------SKKKTAAEHAAE 128
R+LF +KVT + S N + F P+ K+ AAEH +
Sbjct: 648 RQLFLYKVTIPALASQNPAIHPFIPPKLSAYVDEAKRYAAEHTLQ 692
>gi|344245382|gb|EGW01486.1| Protein SON [Cricetulus griseus]
Length = 2319
Score = 38.9 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE 103
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2214 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLINGS 2273
Query: 104 SLNTILECFGAPQSK--KKTAA 123
+ F +P K K TAA
Sbjct: 2274 AYQP---SFASPNKKHAKATAA 2292
>gi|324518074|gb|ADY46997.1| Protein SON [Ascaris suum]
gi|324540941|gb|ADY49607.1| Protein SON, partial [Ascaris suum]
Length = 140
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTF 100
S L E+C+ HW PP F C E GP + FT+K
Sbjct: 66 SMLMELCSKKHWPPPQFTCI-ESGPSNNRRFTWKAVV 101
>gi|124487289|ref|NP_001074543.1| APOBEC1 complementation factor [Mus musculus]
gi|341940157|sp|Q5YD48.2|A1CF_MOUSE RecName: Full=APOBEC1 complementation factor; AltName:
Full=APOBEC1-stimulating protein
Length = 595
Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 16/105 (15%)
Query: 40 DYEDDRFYEKESKNEGAP-NKVSAKSK--------LHEICAANHWKPPSFDCCQEEGPCY 90
D +D+ Y+ E P N VS K + L EIC N+W P + G
Sbjct: 416 DKREDKLYDLLPGMELTPMNTVSLKPQGIKLAPQILEEICQKNNWGQPVYQLHSAIGQDQ 475
Query: 91 RKLFTFKVTF-EIESLNTILECFGAPQ------SKKKTAAEHAAE 128
R+LF +KVT + S N + F P+ K+ AAEH +
Sbjct: 476 RQLFLYKVTIPALASQNPAIHPFIPPKLSAYVDEAKRYAAEHTLQ 520
>gi|119630222|gb|EAX09817.1| SON DNA binding protein, isoform CRA_d [Homo sapiens]
Length = 2482
Score = 38.5 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE 103
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2377 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLINGS 2436
Query: 104 SLNTILECFGAPQSK--KKTAA 123
+ F +P K K TAA
Sbjct: 2437 AYQP---SFASPNKKHAKATAA 2455
>gi|397507175|ref|XP_003846008.1| PREDICTED: LOW QUALITY PROTEIN: protein SON [Pan paniscus]
Length = 2436
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE 103
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2331 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLINGS 2390
Query: 104 SLNTILECFGAPQSK--KKTAA 123
+ F +P K K TAA
Sbjct: 2391 AYQP---SFASPNKKHAKATAA 2409
>gi|302826423|ref|XP_002994689.1| hypothetical protein SELMODRAFT_432592 [Selaginella moellendorffii]
gi|300137140|gb|EFJ04244.1| hypothetical protein SELMODRAFT_432592 [Selaginella moellendorffii]
Length = 243
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 33/88 (37%)
Query: 49 KESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTI 108
K +K E + L++IC W P + E GP + K FT+ V
Sbjct: 146 KVTKMENDKANAFTRQTLNDICLQRQWPMPQYRLLSESGPAHAKRFTYTVRVNTRERGWT 205
Query: 109 LECFGAPQSKKKTAAEHAAEGALWYLEH 136
EC G K A + AA L L+
Sbjct: 206 DECEGQAMPSMKKAKDSAALVLLEVLKQ 233
>gi|307215189|gb|EFN89961.1| Interferon-inducible double stranded RNA-dependent protein kinase
activator A [Harpegnathos saltator]
Length = 381
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 18/123 (14%)
Query: 17 CLTKHIDPNSTSS---VINNIETSGYDYEDDRFYEKESKNEGAPNKVSAKSKLHEICAAN 73
L K I N+ SS + NN+ S E + E++ N N + A L E+C +
Sbjct: 129 VLDKLIGVNTESSESPIPNNLPDSQNLQELQTYGEEKVMN----NPIGA---LQEMCMSR 181
Query: 74 HWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTAAEHAAEGALWY 133
HW PP + EEG + + FT + +IL+ Q K K A+ A +W
Sbjct: 182 HWPPPKYTMEGEEGLPHERQFTI--------VCSILKYREVGQGKSKKVAKRHAAHKMWQ 233
Query: 134 LEH 136
H
Sbjct: 234 ALH 236
>gi|119630227|gb|EAX09822.1| SON DNA binding protein, isoform CRA_h [Homo sapiens]
Length = 2459
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE 103
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2354 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLINGS 2413
Query: 104 SLNTILECFGAPQSK--KKTAA 123
+ F +P K K TAA
Sbjct: 2414 AYQP---SFASPNKKHAKATAA 2432
>gi|301768411|ref|XP_002919630.1| PREDICTED: protein SON-like [Ailuropoda melanoleuca]
Length = 2336
Score = 38.5 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE 103
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2231 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLINGS 2290
Query: 104 SLNTILECFGAPQSK--KKTAA 123
+ F +P K K TAA
Sbjct: 2291 AYQP---SFASPNKKHAKATAA 2309
>gi|149062707|gb|EDM13130.1| apobec-1 complementation factor, isoform CRA_d [Rattus norvegicus]
Length = 578
Score = 38.5 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 16/105 (15%)
Query: 40 DYEDDRFYEKESKNEGAP-NKVSAKSK--------LHEICAANHWKPPSFDCCQEEGPCY 90
D D+ Y+ E P N +S K + L EIC N+W P + G
Sbjct: 399 DKRQDKLYDLLPGMELTPMNTISLKPQGVKLAPQILEEICQKNNWGQPVYQLHSAIGQDQ 458
Query: 91 RKLFTFKVTF-EIESLNTILECFGAPQ------SKKKTAAEHAAE 128
R+LF +KVT + S N + F P+ K+ AAEH +
Sbjct: 459 RQLFLYKVTIPALASQNPAIHPFTPPKLSAYVDEAKRYAAEHTLQ 503
>gi|149062706|gb|EDM13129.1| apobec-1 complementation factor, isoform CRA_c [Rattus norvegicus]
Length = 586
Score = 38.5 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 16/105 (15%)
Query: 40 DYEDDRFYEKESKNEGAP-NKVSAKSK--------LHEICAANHWKPPSFDCCQEEGPCY 90
D D+ Y+ E P N +S K + L EIC N+W P + G
Sbjct: 407 DKRQDKLYDLLPGMELTPMNTISLKPQGVKLAPQILEEICQKNNWGQPVYQLHSAIGQDQ 466
Query: 91 RKLFTFKVTF-EIESLNTILECFGAPQ------SKKKTAAEHAAE 128
R+LF +KVT + S N + F P+ K+ AAEH +
Sbjct: 467 RQLFLYKVTIPALASQNPAIHPFTPPKLSAYVDEAKRYAAEHTLQ 511
>gi|403271818|ref|XP_003927803.1| PREDICTED: protein SON [Saimiri boliviensis boliviensis]
Length = 2419
Score = 38.5 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE 103
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2314 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLINGS 2373
Query: 104 SLNTILECFGAPQSK--KKTAA 123
+ F +P K K TAA
Sbjct: 2374 AYQP---SFASPNKKHAKATAA 2392
>gi|167427274|gb|ABZ80253.1| SON DNA-binding protein isoform F (predicted) [Callithrix jacchus]
Length = 2454
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE 103
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2349 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLINGS 2408
Query: 104 SLNTILECFGAPQSK--KKTAA 123
+ F +P K K TAA
Sbjct: 2409 AYQP---SFASPNKKHAKATAA 2427
>gi|426392883|ref|XP_004062768.1| PREDICTED: protein SON isoform 1 [Gorilla gorilla gorilla]
Length = 2368
Score = 38.5 bits (88), Expect = 1.00, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE 103
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2263 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLINGS 2322
Query: 104 SLNTILECFGAPQSK--KKTAA 123
+ F +P K K TAA
Sbjct: 2323 AYQP---SFASPNKKHAKATAA 2341
>gi|395849039|ref|XP_003797144.1| PREDICTED: protein SON [Otolemur garnettii]
Length = 2418
Score = 38.5 bits (88), Expect = 1.00, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE 103
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2313 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLINGS 2372
Query: 104 SLNTILECFGAPQSK--KKTAA 123
+ F +P K K TAA
Sbjct: 2373 AYQP---SFASPNKKHAKATAA 2391
>gi|390478200|ref|XP_002807816.2| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100390479
[Callithrix jacchus]
Length = 2365
Score = 38.5 bits (88), Expect = 1.00, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE 103
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2260 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLINGS 2319
Query: 104 SLNTILECFGAPQSK--KKTAA 123
+ F +P K K TAA
Sbjct: 2320 AYQP---SFASPNKKHAKATAA 2338
>gi|50346315|gb|AAT74916.1| APOBEC-1 stimulating protein [Mus musculus]
Length = 595
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 16/105 (15%)
Query: 40 DYEDDRFYEKESKNEGAP-NKVSAKSK--------LHEICAANHWKPPSFDCCQEEGPCY 90
D +D+ Y+ E P N VS K + L EIC N+W P + G
Sbjct: 416 DKREDKLYDLLPGMELTPMNTVSLKPQGIKLAPQILEEICQKNNWGQPVYQLHSAIGQDQ 475
Query: 91 RKLFTFKVTF-EIESLNTILECFGAPQ------SKKKTAAEHAAE 128
R+LF +KVT + S N + F P+ K+ AAEH +
Sbjct: 476 RQLFLYKVTVPALASQNPAIHPFIPPKLSAYVDEAKRYAAEHTLQ 520
>gi|81916405|sp|Q923K9.1|A1CF_RAT RecName: Full=APOBEC1 complementation factor; AltName:
Full=APOBEC1-stimulating protein
gi|15072439|gb|AAK50145.1| APOBEC-1 complementation factor long isoform [Rattus norvegicus]
Length = 594
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 16/105 (15%)
Query: 40 DYEDDRFYEKESKNEGAP-NKVSAKSK--------LHEICAANHWKPPSFDCCQEEGPCY 90
D D+ Y+ E P N +S K + L EIC N+W P + G
Sbjct: 415 DKRQDKLYDLLPGMELTPMNTISLKPQGVKLAPQILEEICQKNNWGQPVYQLHSAIGQDQ 474
Query: 91 RKLFTFKVTF-EIESLNTILECFGAPQ------SKKKTAAEHAAE 128
R+LF +KVT + S N + F P+ K+ AAEH +
Sbjct: 475 RQLFLYKVTIPALASQNPAIHPFTPPKLSAYVDEAKRYAAEHTLQ 519
>gi|320352215|ref|YP_004193554.1| RNAse III [Desulfobulbus propionicus DSM 2032]
gi|320120717|gb|ADW16263.1| RNAse III [Desulfobulbus propionicus DSM 2032]
Length = 243
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 62 AKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKK 119
AKS L E+ + P + EEGP + +LF+ VTF+ E L + G SKK
Sbjct: 172 AKSSLQELLQERFNEGPEYMLTGEEGPAHARLFSITVTFQGEELGS-----GRASSKK 224
>gi|229220869|gb|ACQ45368.1| SON DNA-binding protein isoform F (predicted), 3 prime [Dasypus
novemcinctus]
Length = 2012
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 1940 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 1994
>gi|50346317|gb|AAT74917.1| APOBEC-1 stimulating protein [Mus musculus]
Length = 587
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 16/105 (15%)
Query: 40 DYEDDRFYEKESKNEGAP-NKVSAKSK--------LHEICAANHWKPPSFDCCQEEGPCY 90
D +D+ Y+ E P N VS K + L EIC N+W P + G
Sbjct: 408 DKREDKLYDLLPGMELTPMNTVSLKPQGIKLAPQILEEICQKNNWGQPVYQLHSAIGQDQ 467
Query: 91 RKLFTFKVTF-EIESLNTILECFGAPQ------SKKKTAAEHAAE 128
R+LF +KVT + S N + F P+ K+ AAEH +
Sbjct: 468 RQLFLYKVTVPALASQNPAIHPFIPPKLSAYVDEAKRYAAEHTLQ 512
>gi|19173760|ref|NP_596891.1| APOBEC1 complementation factor [Rattus norvegicus]
gi|15077247|gb|AAK83095.1|AF290984_1 APOBEC-1 complementation factor short isoform [Rattus norvegicus]
Length = 586
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 16/105 (15%)
Query: 40 DYEDDRFYEKESKNEGAP-NKVSAKSK--------LHEICAANHWKPPSFDCCQEEGPCY 90
D D+ Y+ E P N +S K + L EIC N+W P + G
Sbjct: 407 DKRQDKLYDLLPGMELTPMNTISLKPQGVKLAPQILEEICQKNNWGQPVYQLHSAIGQDQ 466
Query: 91 RKLFTFKVTF-EIESLNTILECFGAPQ------SKKKTAAEHAAE 128
R+LF +KVT + S N + F P+ K+ AAEH +
Sbjct: 467 RQLFLYKVTIPALASQNPAIHPFTPPKLSAYVDEAKRYAAEHTLQ 511
>gi|36546|emb|CAA45282.1| son-a [Homo sapiens]
Length = 1523
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE 103
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 1347 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLINGS 1406
Query: 104 SLNTILECFGAPQSK--KKTAA 123
+ F +P K K TAA
Sbjct: 1407 AYQP---SFASPNKKHAKATAA 1425
>gi|302036171|ref|YP_003796493.1| ribonuclease III [Candidatus Nitrospira defluvii]
gi|300604235|emb|CBK40567.1| Ribonuclease III [Candidatus Nitrospira defluvii]
Length = 234
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 63 KSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTA 122
K++L E+C + P ++ +E GP + K+F ++T + ++ G +SKK+ A
Sbjct: 168 KTQLQEVCQKRYESLPQYETVRESGPDHEKVFEVELTIQ-----GVMRGIGRGRSKKE-A 221
Query: 123 AEHAAEGALWYL 134
+ AA+ AL L
Sbjct: 222 EQMAAKEALTQL 233
>gi|328908995|gb|AEB61165.1| SON-like protein, partial [Equus caballus]
Length = 71
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
S L EIC W+PP F + GP +RK F F+V
Sbjct: 19 SALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 53
>gi|354490876|ref|XP_003507582.1| PREDICTED: APOBEC1 complementation factor-like [Cricetulus griseus]
Length = 592
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 16/105 (15%)
Query: 40 DYEDDRFYEKESKNEGAP-NKVSAKSK--------LHEICAANHWKPPSFDCCQEEGPCY 90
D +D+ Y+ E P N VS K + L EIC N+W P + G
Sbjct: 416 DKREDKLYDILPGMELTPMNPVSLKPQGIKLAPQILEEICQKNNWGQPVYQLHSAIGQDQ 475
Query: 91 RKLFTFKVTF-EIESLNTILECFGAPQ------SKKKTAAEHAAE 128
R+LF +KVT + S N + F P+ K AAEH +
Sbjct: 476 RQLFLYKVTIPALASQNPAIHPFTPPKLSAYVDEAKTYAAEHTLQ 520
>gi|354466348|ref|XP_003495636.1| PREDICTED: protein SON-like [Cricetulus griseus]
Length = 2433
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2361 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2415
>gi|296491682|tpg|DAA33715.1| TPA: SON DNA-binding protein [Bos taurus]
Length = 2136
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE 103
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2031 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLINGS 2090
Query: 104 SLNTILECFGAPQSK--KKTAA 123
+ F +P K K TAA
Sbjct: 2091 AYQP---SFASPNKKHAKATAA 2109
>gi|21040326|ref|NP_620305.1| protein SON isoform F [Homo sapiens]
gi|296453022|sp|P18583.4|SON_HUMAN RecName: Full=Protein SON; AltName: Full=Bax antagonist selected in
saccharomyces 1; Short=BASS1; AltName: Full=Negative
regulatory element-binding protein; Short=NRE-binding
protein; AltName: Full=Protein DBP-5; AltName: Full=SON3
Length = 2426
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2354 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2408
>gi|139948494|ref|NP_001077163.1| protein SON [Bos taurus]
gi|61966462|emb|CAG47115.1| SON DNA-binding protein [Bos taurus]
Length = 2136
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE 103
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2031 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLINGS 2090
Query: 104 SLNTILECFGAPQSK--KKTAA 123
+ F +P K K TAA
Sbjct: 2091 AYQP---SFASPNKKHAKATAA 2109
>gi|410970066|ref|XP_004001391.1| PREDICTED: LOW QUALITY PROTEIN: protein SON [Felis catus]
Length = 2398
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2326 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2380
>gi|119630221|gb|EAX09816.1| SON DNA binding protein, isoform CRA_c [Homo sapiens]
Length = 2426
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2354 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2408
>gi|114683932|ref|XP_001165975.1| PREDICTED: protein SON isoform 9 [Pan troglodytes]
Length = 2426
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2354 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2408
>gi|426217131|ref|XP_004002807.1| PREDICTED: protein SON isoform 1 [Ovis aries]
Length = 2373
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2301 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2355
>gi|17046373|gb|AAL34497.1|AF380179_1 SON DNA binding protein isoform A [Homo sapiens]
Length = 2140
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE 103
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2035 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLINGS 2094
Query: 104 SLNTILECFGAPQSK--KKTAA 123
+ F +P K K TAA
Sbjct: 2095 AYQP---SFASPNKKHAKATAA 2113
>gi|348552920|ref|XP_003462275.1| PREDICTED: protein SON-like [Cavia porcellus]
Length = 2249
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2177 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2231
>gi|17046383|gb|AAL34502.1|AF380184_1 SON DNA binding protein isoform F [Homo sapiens]
Length = 2426
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2354 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2408
>gi|148671870|gb|EDL03817.1| Son cell proliferation protein, isoform CRA_a [Mus musculus]
Length = 2451
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2379 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2433
>gi|124358955|ref|NP_849211.3| protein SON [Mus musculus]
gi|338817942|sp|Q9QX47.2|SON_MOUSE RecName: Full=Protein SON; AltName: Full=Negative regulatory
element-binding protein; Short=NRE-binding protein
Length = 2444
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2372 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2426
>gi|14571500|gb|AAK07692.1| NREBP [Homo sapiens]
Length = 2386
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2314 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2368
>gi|351695172|gb|EHA98090.1| Protein SON, partial [Heterocephalus glaber]
Length = 2338
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2266 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2320
>gi|332229491|ref|XP_003263921.1| PREDICTED: protein SON isoform 1 [Nomascus leucogenys]
Length = 2426
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2354 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2408
>gi|74001129|ref|XP_856774.1| PREDICTED: protein SON isoform 5 [Canis lupus familiaris]
gi|359323542|ref|XP_003640124.1| PREDICTED: protein SON-like isoform 1 [Canis lupus familiaris]
Length = 2431
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2359 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2413
>gi|6671176|gb|AAF23120.1| SON protein [Mus musculus]
Length = 2404
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2332 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2386
>gi|335300657|ref|XP_003358980.1| PREDICTED: protein SON isoform 1 [Sus scrofa]
Length = 2414
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2342 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2396
>gi|281345147|gb|EFB20731.1| hypothetical protein PANDA_008269 [Ailuropoda melanoleuca]
Length = 2265
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2208 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2262
>gi|440908014|gb|ELR58085.1| Protein SON [Bos grunniens mutus]
Length = 2352
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2280 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2334
>gi|281332168|ref|NP_001163798.1| SON DNA-binding protein isoform 1 [Rattus norvegicus]
Length = 2446
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2374 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2428
>gi|204305650|gb|ACG63674.2| SON DNA-binding protein isoform F (predicted) [Otolemur garnettii]
Length = 2411
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2339 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2393
>gi|169246083|gb|ACA51060.1| SON DNA-binding protein isoform F (predicted) [Callicebus moloch]
Length = 2422
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2350 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2404
>gi|281183286|ref|NP_001162514.1| protein SON [Papio anubis]
gi|159487307|gb|ABW97197.1| SON DNA binding protein, isoform f (predicted) [Papio anubis]
Length = 2426
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2354 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2408
>gi|338732330|ref|YP_004670803.1| ribonuclease 3 [Simkania negevensis Z]
gi|336481713|emb|CCB88312.1| ribonuclease 3 [Simkania negevensis Z]
Length = 236
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 63 KSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKT 121
K++L + C N+ KPP+++ EEGP + K F V + + L GA SKK+
Sbjct: 168 KAELQDYCQKNYQKPPTYEVINEEGPDHEKTFYVVVKLDNQILGK-----GAGTSKKEA 221
>gi|189908181|gb|ACE60213.1| SON protein (predicted) [Sorex araneus]
Length = 1825
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 1753 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 1807
>gi|297287594|ref|XP_001093086.2| PREDICTED: protein SON-like [Macaca mulatta]
Length = 2140
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSK--KKT 121
S L EIC W+PP F + GP +RK F F+V + F +P K K T
Sbjct: 2055 SALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLINGSAYQP---SFASPNKKHAKAT 2111
Query: 122 AA 123
AA
Sbjct: 2112 AA 2113
>gi|218456207|gb|ACK77499.1| SON DNA-binding protein isoform F (predicted) [Oryctolagus cuniculus]
Length = 2402
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2330 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2384
>gi|177773079|gb|ACB73274.1| SON DNA-binding protein isoform F (predicted) [Rhinolophus
ferrumequinum]
Length = 2432
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 2360 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2414
>gi|193787107|dbj|BAG52313.1| unnamed protein product [Homo sapiens]
Length = 579
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSK--KKT 121
S L EIC W+PP F + GP +RK F F+V + F +P K K T
Sbjct: 494 SALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRVLINGSAYQP---SFASPNKKHAKAT 550
Query: 122 AA 123
AA
Sbjct: 551 AA 552
>gi|449283806|gb|EMC90400.1| Protein SON, partial [Columba livia]
Length = 460
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 19/35 (54%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
S L EIC W PP F + GP +RK F FKV
Sbjct: 375 SALMEICNKRRWTPPEFVLVDDSGPDHRKHFIFKV 409
>gi|34535081|dbj|BAC87202.1| unnamed protein product [Homo sapiens]
Length = 454
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 382 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 436
>gi|149059854|gb|EDM10737.1| rCG58807, isoform CRA_c [Rattus norvegicus]
Length = 454
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F+V
Sbjct: 382 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 436
>gi|332017864|gb|EGI58524.1| Protein SON [Acromyrmex echinatior]
Length = 808
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTAA 123
S L E C P ++ C E GP +RK F FKV +N I S KK A
Sbjct: 738 SLLGEYCTKKKLGAPVYELCFESGPDHRKNFLFKV-----KVNGIEYKPSVASSNKKQA- 791
Query: 124 EHAAEGALWYLEHLGYFP 141
AE A L++LG P
Sbjct: 792 --KAEAAQICLQNLGLLP 807
>gi|224141703|ref|XP_002324204.1| dicer-like protein [Populus trichocarpa]
gi|222865638|gb|EEF02769.1| dicer-like protein [Populus trichocarpa]
Length = 1492
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 16/106 (15%)
Query: 48 EKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQE---------EGPCYRKLFTFKV 98
E +K +G P ++ L+++C W P+FD + EGP R F V
Sbjct: 1390 ESINKKKGGP-----RTSLYDLCKKVQWTMPTFDTTETKSRTAIEFGEGPDKRTGFNSYV 1444
Query: 99 TFEIESLNT--ILECFGAPQSKKKTAAEHAAEGALWYLEHLGYFPI 142
+ I ++ + ++EC G + KKT+ + AA L LE G I
Sbjct: 1445 SKIIMNIPSYGVVECAGEASADKKTSYDSAALAMLNELEKRGQLII 1490
>gi|349604800|gb|AEQ00249.1| Protein SON-like protein, partial [Equus caballus]
Length = 299
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTF 96
S L EIC W+PP F + GP +RK F F
Sbjct: 267 SALMEICNKRRWQPPEFLLVHDSGPDHRKHFLF 299
>gi|350399379|ref|XP_003485505.1| PREDICTED: RISC-loading complex subunit tarbp2-like [Bombus
impatiens]
Length = 381
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 22/113 (19%)
Query: 24 PNSTSSVINNIETSGYDYEDDRFYEKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCC 83
PN+ S N E SGY E + N + A L E+C + HW PP +
Sbjct: 146 PNNLSDSENLQELSGYGEE-----------KIITNPIGA---LQEMCMSRHWPPPKYTIE 191
Query: 84 QEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTAAEHAAEGALWYLEH 136
EEG + + FT + ++L+ Q K K A+ A +W H
Sbjct: 192 NEEGLPHERQFTI--------VCSVLKYREVGQGKSKKVAKRHAAHKMWQALH 236
>gi|156357520|ref|XP_001624265.1| predicted protein [Nematostella vectensis]
gi|156211031|gb|EDO32165.1| predicted protein [Nematostella vectensis]
Length = 118
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTAA 123
S L EICA W+ P F + GP + K F FKV PQ
Sbjct: 44 SMLQEICARKKWQLPDFQLIFDHGPPHSKQFLFKVAVNGYEYQ--------PQVVSSNKK 95
Query: 124 EHAAEGALWYLEHLGYFP 141
+ A+ AL+ L+ +G P
Sbjct: 96 QAKAQCALYALKAIGAVP 113
>gi|441432411|ref|YP_007354453.1| ribonuclease III [Acanthamoeba polyphaga moumouvirus]
gi|440383491|gb|AGC02017.1| ribonuclease III [Acanthamoeba polyphaga moumouvirus]
Length = 529
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 56 APNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAP 115
A N+ + K + ++ NHW P + E+GP ++K FT + LN L G
Sbjct: 454 AENETNYKDLVLQLYNKNHWGHPIYKLLSEKGPDHKKKFTMGIY-----LNNKLVGKGTA 508
Query: 116 QSKKKTAAEHAAEGALWY 133
SKKK AE A +++
Sbjct: 509 YSKKK--AEQIASKKMYH 524
>gi|345326338|ref|XP_001513874.2| PREDICTED: hypothetical protein LOC100083296 [Ornithorhynchus
anatinus]
Length = 2202
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
S L EIC W+PP F + GP +RK F F+V
Sbjct: 2150 SALMEICNKRRWQPPEFLLVHDSGPDHRKHFLFRV 2184
>gi|301611919|ref|XP_002935470.1| PREDICTED: APOBEC1 complementation factor-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 587
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 66 LHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTF-EIESLNTILECFGAPQ 116
L EIC N+W P + GP R+LF +KVT + S N + F P+
Sbjct: 452 LEEICQKNNWGQPVYQLHSAIGPDQRQLFLYKVTIPALASQNPTIHPFTPPK 503
>gi|242090101|ref|XP_002440883.1| hypothetical protein SORBIDRAFT_09g013160 [Sorghum bicolor]
gi|241946168|gb|EES19313.1| hypothetical protein SORBIDRAFT_09g013160 [Sorghum bicolor]
Length = 377
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 63 KSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTA 122
K KL E C HW P F +E GP + + F + ++++ G P S+ K A
Sbjct: 305 KQKLTEQCIGKHWPKPIFKLEKEGGPAHER--NFVCSVQVDTKTGTFVTIGDPMSRVKDA 362
Query: 123 AEHAAEGALWYLEHL 137
AA+ + L L
Sbjct: 363 ENSAAQKMVELLLKL 377
>gi|383849930|ref|XP_003700586.1| PREDICTED: RISC-loading complex subunit tarbp2-like [Megachile
rotundata]
Length = 377
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 66 LHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTAAEH 125
L E+C + HW PP + EEG + + FT + +IL+ Q K K A+
Sbjct: 170 LQEMCMSRHWPPPKYTMENEEGLPHERQFTI--------VCSILKYREVGQGKSKKVAKR 221
Query: 126 AAEGALWYLEH 136
A +W H
Sbjct: 222 HAAHKMWQALH 232
>gi|340372411|ref|XP_003384737.1| PREDICTED: protein SON-like [Amphimedon queenslandica]
Length = 136
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 66 LHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTAAEH 125
L E+ W PPS++ E GP + ++F +KVT ++ C S KK A
Sbjct: 65 LQELSVKKLWDPPSYEIVSETGPPHMRIFIYKVTVNGDTYQP--SCG---TSNKKLA--- 116
Query: 126 AAEGALWYLEHLGYF 140
A+ AL L+ LG
Sbjct: 117 KAQAALTCLKSLGLI 131
>gi|301611921|ref|XP_002935471.1| PREDICTED: APOBEC1 complementation factor-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 579
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 66 LHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTF-EIESLNTILECFGAPQ 116
L EIC N+W P + GP R+LF +KVT + S N + F P+
Sbjct: 444 LEEICQKNNWGQPVYQLHSAIGPDQRQLFLYKVTIPALASQNPTIHPFTPPK 495
>gi|345489251|ref|XP_001601132.2| PREDICTED: probable RISC-loading complex subunit
BRAFLDRAFT_242885-like [Nasonia vitripennis]
Length = 392
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Query: 66 LHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTAAEH 125
L E+C + HW PP + EEG + + FT + +IL+ Q K K A+
Sbjct: 184 LQEMCMSRHWPPPKYSMEGEEGLPHERQFTI--------VCSILKYRQVGQGKSKKLAKR 235
Query: 126 AAEGALW 132
A +W
Sbjct: 236 QAAHKMW 242
>gi|410974963|ref|XP_003993908.1| PREDICTED: LOW QUALITY PROTEIN: APOBEC1 complementation factor
[Felis catus]
Length = 592
Score = 37.0 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
Query: 40 DYEDDRFYEKESKNEGAP-NKVSAKSK--------LHEICAANHWKPPSFDCCQEEGPCY 90
D +D+ Y+ E P N V+ K + L EIC N+W P + G
Sbjct: 416 DKREDKLYDLLPGMELTPMNPVTLKPQGIKLAPQILEEICQKNNWGQPVYQLHSAIGQDQ 475
Query: 91 RKLFTFKVTF-EIESLNTILECFGAPQ------SKKKTAAEH 125
R+LF +K+T + S N + F P+ K AAEH
Sbjct: 476 RQLFLYKITIPALASQNPAIHPFTPPKLSAYVDEAKTYAAEH 517
>gi|332029664|gb|EGI69553.1| Interferon-inducible double stranded RNA-dependent protein kinase
activator A [Acromyrmex echinatior]
Length = 377
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 66 LHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTAAEH 125
L E+C + HW PP + EEG + + FT + +IL+ Q K K A+
Sbjct: 170 LQEMCMSRHWPPPKYSMEGEEGLPHERQFTI--------VCSILKYREVGQGKSKKVAKR 221
Query: 126 AAEGALWYLEH 136
A +W H
Sbjct: 222 HAAHKMWQALH 232
>gi|328784437|ref|XP_624606.3| PREDICTED: RISC-loading complex subunit tarbp2-like [Apis
mellifera]
Length = 383
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 22/113 (19%)
Query: 24 PNSTSSVINNIETSGYDYEDDRFYEKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCC 83
PNS N E SGY E + N + A L E+C + HW PP +
Sbjct: 148 PNSIPDSENLQELSGYGEE-----------KIITNPIGA---LQEMCMSRHWPPPKYTIE 193
Query: 84 QEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTAAEHAAEGALWYLEH 136
EEG + + FT + ++L+ Q K K A+ A +W H
Sbjct: 194 NEEGLPHERQFTI--------VCSVLKYREVGQGKSKKVAKRHAAHKMWQALH 238
>gi|380016563|ref|XP_003692250.1| PREDICTED: RISC-loading complex subunit tarbp2-like [Apis florea]
Length = 383
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 22/113 (19%)
Query: 24 PNSTSSVINNIETSGYDYEDDRFYEKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCC 83
PNS N E SGY E + N + A L E+C + HW PP +
Sbjct: 148 PNSIPDSENLQELSGYGEE-----------KIITNPIGA---LQEMCMSRHWPPPKYTIE 193
Query: 84 QEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTAAEHAAEGALWYLEH 136
EEG + + FT + ++L+ Q K K A+ A +W H
Sbjct: 194 NEEGLPHERQFTI--------VCSVLKYREVGQGKSKKVAKRHAAHKMWQALH 238
>gi|363728854|ref|XP_003640567.1| PREDICTED: uncharacterized protein LOC770637 [Gallus gallus]
Length = 3708
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 19/35 (54%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
S L EIC W PP F + GP +RK F FKV
Sbjct: 3623 SALMEICNKRRWSPPEFVLVDDSGPDHRKHFIFKV 3657
>gi|371944883|gb|AEX62704.1| putative ribonuclease 3 [Moumouvirus Monve]
Length = 208
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 56 APNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAP 115
A N+ + K + ++ NHW P + E+GP ++K FT + LN L G
Sbjct: 133 AENETNYKDLVLQLYNKNHWGHPIYKLLSEKGPDHKKKFTMGIY-----LNNKLVGKGTA 187
Query: 116 QSKKKTAAEHAAEGALWY 133
SKKK AE A +++
Sbjct: 188 YSKKK--AEQIASKKMYH 203
>gi|406994955|gb|EKE13831.1| hypothetical protein ACD_12C00799G0004 [uncultured bacterium]
Length = 230
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 60 VSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTF 100
+S+KSKL EI + K P + +E+GP ++++F V F
Sbjct: 161 LSSKSKLQEIIQRKYKKTPIYKVIEEKGPEHKRIFKIGVYF 201
>gi|242014081|ref|XP_002427726.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512167|gb|EEB14988.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 865
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 17/95 (17%)
Query: 55 GAPNKVSAK-------SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFE-IESLN 106
GAP +V S L+E+C+ + P F+ C E GP ++K F FKV +E
Sbjct: 777 GAPAQVIKNLDGKHPVSLLNELCSRRKYGTPQFELCFECGPDHKKNFLFKVIVNGVEYTP 836
Query: 107 TILECFGAPQSKKKTAAEHAAEGALWYLEHLGYFP 141
TI A +KK+ E AA L LG P
Sbjct: 837 TI-----ASPNKKQAKVEAAA----VCLRALGIIP 862
>gi|448825532|ref|YP_007418463.1| putative ribonuclease 3 [Megavirus lba]
gi|444236717|gb|AGD92487.1| putative ribonuclease 3 [Megavirus lba]
Length = 542
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 53 NEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECF 112
+E A N+ + K + ++ NHW P + QE+GP ++K FT + LN L
Sbjct: 462 DEIAENETNYKDLVLQLYNKNHWGHPIYKIIQEKGPDHKKKFTMGIY-----LNDKLMGR 516
Query: 113 GAPQSKKKTAAEHAAEGALW 132
G SKKK AE A ++
Sbjct: 517 GTAYSKKK--AEQIASKRMY 534
>gi|363540715|ref|YP_004894610.1| mg559 gene product [Megavirus chiliensis]
gi|350611880|gb|AEQ33324.1| putative ribonuclease 3 [Megavirus chiliensis]
gi|425701462|gb|AFX92624.1| putative ribonuclease 3 [Megavirus courdo11]
Length = 542
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 53 NEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECF 112
+E A N+ + K + ++ NHW P + QE+GP ++K FT + LN L
Sbjct: 462 DEIAENETNYKDLVLQLYNKNHWGHPIYKIIQEKGPDHKKKFTMGIY-----LNDKLMGR 516
Query: 113 GAPQSKKKTAAEHAAEGALW 132
G SKKK AE A ++
Sbjct: 517 GTAYSKKK--AEQIASKRMY 534
>gi|301620037|ref|XP_002939389.1| PREDICTED: hypothetical protein LOC100485785 [Xenopus (Silurana)
tropicalis]
Length = 1537
Score = 36.6 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 64 SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVT 99
S L E+C W PP F + GP +RK F F+VT
Sbjct: 1450 SALMELCNKKKWSPPEFVLVDDTGPEHRKRFLFRVT 1485
>gi|344274538|ref|XP_003409072.1| PREDICTED: APOBEC1 complementation factor [Loxodonta africana]
Length = 595
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 16/105 (15%)
Query: 40 DYEDDRFYEKESKNEGAP-NKVSAKSK--------LHEICAANHWKPPSFDCCQEEGPCY 90
D +D+ Y+ E P N V+ K + L EIC N+W P + G
Sbjct: 416 DKREDKLYDLLPGMELTPMNPVTLKPQGIKLAPQILEEICQKNNWGQPVYQLHTAIGQDQ 475
Query: 91 RKLFTFKVTF-EIESLNTILECFGAPQ------SKKKTAAEHAAE 128
R+LF +K+T + S N + F P+ K AAEH +
Sbjct: 476 RQLFLYKITIPALASQNPAIHPFTPPKLSAYVDEAKTYAAEHTLQ 520
>gi|307172924|gb|EFN64091.1| Interferon-inducible double stranded RNA-dependent protein kinase
activator A [Camponotus floridanus]
Length = 376
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 66 LHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTAAEH 125
L E+C + HW PP + EEG + + FT + +IL+ Q K K A+
Sbjct: 169 LQEMCMSRHWPPPKYTMEGEEGLPHERQFTI--------VCSILKYREVGQGKSKKVAKR 220
Query: 126 AAEGALWYLEH 136
A +W H
Sbjct: 221 HAAHKMWQALH 231
>gi|340721164|ref|XP_003398995.1| PREDICTED: RISC-loading complex subunit tarbp2-like [Bombus
terrestris]
Length = 388
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 22/113 (19%)
Query: 24 PNSTSSVINNIETSGYDYEDDRFYEKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCC 83
PN+ S N E SGY E + N + A L E+C + HW PP +
Sbjct: 153 PNNLSDSENLQELSGYGEE-----------KIITNPIGA---LQEMCMSRHWPPPKYTIE 198
Query: 84 QEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTAAEHAAEGALWYLEH 136
EEG + + FT + ++L+ Q K K A+ A +W H
Sbjct: 199 NEEGLPHERQFTI--------VCSVLKYREHGQGKSKKVAKRHAAHKMWQALH 243
>gi|432119038|gb|ELK38263.1| Protein SON [Myotis davidii]
Length = 2420
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 48 EKESKNEGAPNK-VSAK---SKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV 98
+K S N A K +S K S L EIC W+PP F + GP +RK F F++
Sbjct: 2321 QKRSGNFSAAMKDLSGKHPVSALMEICNKRRWQPPEFLLIHDSGPDHRKHFLFRM 2375
>gi|242054547|ref|XP_002456419.1| hypothetical protein SORBIDRAFT_03g035960 [Sorghum bicolor]
gi|241928394|gb|EES01539.1| hypothetical protein SORBIDRAFT_03g035960 [Sorghum bicolor]
Length = 448
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 63 KSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTA 122
KS+L E+C W PP ++ + EGP + LF V ES F +P +++
Sbjct: 3 KSRLQELCQKRRWAPPVYEPTR-EGPAHTPLFRATVVVNGES-------FSSPDEGERSV 54
Query: 123 AEHAAEGALWYLEHL 137
E A+ E+L
Sbjct: 55 KEACNLAAMAAFENL 69
>gi|449459642|ref|XP_004147555.1| PREDICTED: ribonuclease 3-like protein 2-like [Cucumis sativus]
Length = 338
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 62 AKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKT 121
AK KLH++C W+ P++ ++ GP + ++F V +I + G +S+ K
Sbjct: 262 AKQKLHDVCCKRKWQKPNYSVEKDLGPSHERIFVCSV--KIATCYGTFYIVGDEKSRVKD 319
Query: 122 AAEHAAEGALWYLE 135
A AA + L+
Sbjct: 320 AENSAASLMIRALQ 333
>gi|449526603|ref|XP_004170303.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease 3-like protein 2-like
[Cucumis sativus]
Length = 338
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 62 AKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKT 121
AK KLH++C W+ P++ ++ GP + ++F V +I + G +S+ K
Sbjct: 262 AKQKLHDVCCKRKWQKPNYSVEKDLGPSHERIFVCSV--KIATCYGTFYIVGDEKSRVKD 319
Query: 122 AAEHAAEGALWYLE 135
A AA + L+
Sbjct: 320 AENSAASLMIRALQ 333
>gi|322789739|gb|EFZ14905.1| hypothetical protein SINV_08859 [Solenopsis invicta]
Length = 885
Score = 36.2 bits (82), Expect = 5.3, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 66 LHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIESLNTILECFGAPQSKKKTAAEH 125
L E+C + HW PP + EEG + + FT + +IL+ Q K K A+
Sbjct: 177 LQEMCMSRHWPPPKYTMEGEEGLPHERQFTI--------VCSILKYREVGQGKSKKVAKR 228
Query: 126 AAEGALWYLEH 136
A +W H
Sbjct: 229 QAAHKMWQALH 239
>gi|432857632|ref|XP_004068726.1| PREDICTED: RISC-loading complex subunit tarbp2-like [Oryzias
latipes]
Length = 345
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 30 VINNIETSGYDY---EDDRFYEKESKNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEE 86
V+ E G D ED E ++ N ++ + L E+ W+ P + QE
Sbjct: 106 VVGVDEFVGVDVLVDEDGPQSEMKTTNTSQQSECNPVGALQELVVQKGWRLPEYTVTQES 165
Query: 87 GPCYRKLFTFKVTFE 101
GP +RK FT E
Sbjct: 166 GPAHRKEFTMTCRVE 180
>gi|375161472|gb|AFA41504.1| tar RNA binding protein-like protein [Laodelphax striatella]
Length = 339
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 10/69 (14%)
Query: 66 LHEICAANHWKPPSFDCCQEEGPCYRKLFTFKV-TFEIESLNTILECFGAPQSKKKTAAE 124
L E+C + W PPS+D EEG + + FT ++ + + T K K A+
Sbjct: 131 LQELCMSRRWPPPSYDTEHEEGLPHERQFTIGCQVYKYKEIGT---------GKSKKLAK 181
Query: 125 HAAEGALWY 133
A +W+
Sbjct: 182 RQAANKMWF 190
>gi|195037815|ref|XP_001990356.1| GH18282 [Drosophila grimshawi]
gi|193894552|gb|EDV93418.1| GH18282 [Drosophila grimshawi]
Length = 833
Score = 35.4 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Query: 51 SKNEGAPN----KVSAKSK-----LHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFE 101
SKN A N ++A+ K L+E+ + N W PP + + GP + ++F F V
Sbjct: 740 SKNTNASNIAQVALTAQDKHPVCVLNELTSKNRWTPPQYTLRGDSGPSHSRMFLFSVEIN 799
Query: 102 IESLNTILECFGAPQSKKKTA 122
+S C ++K A
Sbjct: 800 GQSYTPAQSCNNKKEAKMNAA 820
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.132 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,444,877,379
Number of Sequences: 23463169
Number of extensions: 91714063
Number of successful extensions: 164837
Number of sequences better than 100.0: 222
Number of HSP's better than 100.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 164598
Number of HSP's gapped (non-prelim): 243
length of query: 147
length of database: 8,064,228,071
effective HSP length: 110
effective length of query: 37
effective length of database: 9,778,246,777
effective search space: 361795130749
effective search space used: 361795130749
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 71 (32.0 bits)