BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032081
(147 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 163 bits (412), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 78/149 (52%), Positives = 105/149 (70%), Gaps = 2/149 (1%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL-- 58
M L+DDQ+S KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 59 TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
DFP FL+LMA+ MK + +L++AF+V DKD GF+S ++LRH++T++GEKL
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 119 EFDEWIREVDVGSDGKIKYEDFIARMVAK 147
E DE IRE DV DG+I YE+F+ M+AK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 160 bits (404), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 105/149 (70%), Gaps = 2/149 (1%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL-- 58
M L++DQ+S KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 59 TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
DFP FL+LMA+ MK + +L++AF+V DKD GF+S ++LRH++T++GEKL
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 119 EFDEWIREVDVGSDGKIKYEDFIARMVAK 147
E DE IRE DV DG+I Y++F+ M+AK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 159 bits (402), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 104/145 (71%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+D+Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL+LMA+ MK + +L++AF+V DKD GF+S ++LRH++T++GEKL E DE
Sbjct: 64 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE DV DG++ YE+F+ M+AK
Sbjct: 124 MIREADVDGDGQVNYEEFVQVMMAK 148
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 159 bits (401), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 104/145 (71%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+D+Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL+LMA+ MK + +L++AF+V DKD GF+S ++LRH++T++GEKL E DE
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 120
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE DV DG++ YE+F+ M+AK
Sbjct: 121 MIREADVDGDGQVNYEEFVQVMMAK 145
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 159 bits (401), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 104/145 (71%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+D+Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL+LMA+ MK + +L++AF+V DKD GF+S ++LRH++T++GEKL E DE
Sbjct: 64 DFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE DV DG++ YE+F+ M+AK
Sbjct: 124 MIREADVDGDGQVNYEEFVQVMMAK 148
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 156 bits (395), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 103/149 (69%), Gaps = 2/149 (1%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL-- 58
M L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 63
Query: 59 TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL
Sbjct: 64 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 123
Query: 119 EFDEWIREVDVGSDGKIKYEDFIARMVAK 147
E DE IRE D+ DG++ YE+F+ M AK
Sbjct: 124 EVDEMIREADIDGDGQVNYEEFVQMMTAK 152
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 156 bits (395), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 103/149 (69%), Gaps = 2/149 (1%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL-- 58
M L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 59 TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 119 EFDEWIREVDVGSDGKIKYEDFIARMVAK 147
E DE IRE D+ DG++ YE+F+ M AK
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 156 bits (395), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 103/149 (69%), Gaps = 2/149 (1%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL-- 58
M L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 59 TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL
Sbjct: 62 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 121
Query: 119 EFDEWIREVDVGSDGKIKYEDFIARMVAK 147
E DE IRE D+ DG++ YE+F+ M AK
Sbjct: 122 EVDEMIREADIDGDGQVNYEEFVQMMTAK 150
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 156 bits (395), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 103/149 (69%), Gaps = 2/149 (1%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL-- 58
M L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 59 TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 119 EFDEWIREVDVGSDGKIKYEDFIARMVAK 147
E DE IRE D+ DG++ YE+F+ M AK
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 156 bits (394), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 103/149 (69%), Gaps = 2/149 (1%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL-- 58
M L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 59 TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 119 EFDEWIREVDVGSDGKIKYEDFIARMVAK 147
E DE IRE D+ DG++ YE+F+ M AK
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 156 bits (394), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD GF+S ++LRH++T++GEKL E DE
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 124 MIREADIDGDGQVNYEEFVTMMTAK 148
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 156 bits (394), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 103/149 (69%), Gaps = 2/149 (1%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL-- 58
M L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 59 TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 119 EFDEWIREVDVGSDGKIKYEDFIARMVAK 147
E DE IRE D+ DG++ YE+F+ M AK
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 156 bits (394), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 103/149 (69%), Gaps = 2/149 (1%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL-- 58
M L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 59 TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
DFP FL +MA+ MK + ++R+AF+V DKD GF+S ++LRH++T++GEKL
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 119 EFDEWIREVDVGSDGKIKYEDFIARMVAK 147
E DE IRE D+ DG++ YE+F+ M +K
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMMTSK 149
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 155 bits (393), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 102/149 (68%), Gaps = 2/149 (1%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL-- 58
M L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 59 TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
DFP FL +MA+ MK + ++R+AF+V DKD GF+S ++LRH++T++GEKL
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 119 EFDEWIREVDVGSDGKIKYEDFIARMVAK 147
E DE IRE D+ DG++ YE+F+ M K
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMMTTK 149
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 155 bits (392), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 103/149 (69%), Gaps = 2/149 (1%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL-- 58
M L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 59 TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
DFP FL +MA+ MK + ++R+AF+V DKD GF+S ++LRH++T++GEKL
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 119 EFDEWIREVDVGSDGKIKYEDFIARMVAK 147
E DE IRE D+ DG++ YE+F+ M +K
Sbjct: 121 EVDEMIRESDIDGDGQVNYEEFVTMMTSK 149
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 155 bits (392), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 103/149 (69%), Gaps = 2/149 (1%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL-- 58
M L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 59 TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 119 EFDEWIREVDVGSDGKIKYEDFIARMVAK 147
E D+ IRE D+ DG++ YE+F+ M AK
Sbjct: 121 EVDQMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 155 bits (391), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 122 MIREADIDGDGQVNYEEFVQMMTAK 146
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 155 bits (391), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 10 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 69
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 70 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 129
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 130 MIREADIDGDGQVNYEEFVQMMTAK 154
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 155 bits (391), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 124 MIREADIDGDGQVNYEEFVQMMTAK 148
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 155 bits (391), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD GF+S ++LRH++T++GEKL E DE
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M +K
Sbjct: 124 MIREADIDGDGQVNYEEFVTMMTSK 148
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 154 bits (389), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTA--PF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 124 MIREADIDGDGQVNYEEFVQMMTAK 148
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 154 bits (388), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE ++ DG++ YE+F+ M AK
Sbjct: 124 MIREANIDGDGQVNYEEFVQMMTAK 148
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 153 bits (387), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 101/144 (70%), Gaps = 2/144 (1%)
Query: 6 SDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFD 63
+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E D
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 64 FPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEW 123
FP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 61 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 120
Query: 124 IREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 121 IREADIDGDGQVNYEEFVQMMTAK 144
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 153 bits (387), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 102/148 (68%), Gaps = 2/148 (1%)
Query: 2 GKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--T 59
++L+++Q++ KEAF LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 60 APFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSE 119
DFP FL LMA+ MK + + +L +AFKV D+D G +S ++LRH++T++GEKL E
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 120 FDEWIREVDVGSDGKIKYEDFIARMVAK 147
DE IRE D+ DG I YE+F+ MV+K
Sbjct: 121 VDEMIREADIDGDGHINYEEFVRMMVSK 148
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 153 bits (387), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 101/144 (70%), Gaps = 2/144 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 123 WIREVDVGSDGKIKYEDFIARMVA 146
IRE D+ DG++ YE+F+ M A
Sbjct: 124 MIREADIDGDGQVNYEEFVQMMTA 147
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ ++AF + DKD G ++ +L ++ S+G+ +E + I EVD +G I + +F+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 143 RMVAK 147
M K
Sbjct: 71 MMARK 75
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 153 bits (386), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 101/144 (70%), Gaps = 2/144 (1%)
Query: 6 SDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFD 63
+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E D
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 64 FPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEW 123
FP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 63 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 122
Query: 124 IREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 123 IREADIDGDGQVNYEEFVQMMTAK 146
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 153 bits (386), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 101/144 (70%), Gaps = 2/144 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 120
Query: 123 WIREVDVGSDGKIKYEDFIARMVA 146
IRE D+ DG++ YE+F+ M A
Sbjct: 121 MIREADIDGDGQVNYEEFVQMMTA 144
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ ++AF + DKD G ++ +L ++ S+G+ +E + I EVD +G I + +F+
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 67
Query: 143 RMVAK 147
M K
Sbjct: 68 MMARK 72
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 153 bits (386), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 101/145 (69%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GE L E DE
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDE 124
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 125 MIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 153 bits (386), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 101/145 (69%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GE L E DE
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDE 123
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 124 MIREADIDGDGQVNYEEFVQMMTAK 148
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 152 bits (385), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 425 MIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 152 bits (385), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 425 MIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 152 bits (385), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 425 MIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 152 bits (385), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 365
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 366 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 425
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 426 MIREADIDGDGQVNYEEFVQMMTAK 450
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 152 bits (384), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 100/145 (68%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL LMA+ MK + + +L +AFKV D+D G +S ++LRH++T++GEKL E DE
Sbjct: 64 DFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDE 123
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG I YE+F+ MV+K
Sbjct: 124 MIREADIDGDGHINYEEFVRMMVSK 148
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 152 bits (384), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 390
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 391 MIREADIDGDGQVNYEEFVQMMTAK 415
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 152 bits (384), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 390
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 391 MIREADIDGDGQVNYEEFVQMMTAK 415
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 152 bits (383), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 365 DFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 425 MIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 152 bits (383), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTA--PF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 364
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 425 MIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 151 bits (382), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTA--PF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 364 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 424 MIREADIDGDGQVNYEEFVQMMTAK 448
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 151 bits (382), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTA--PF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 424 MIREADIDGDGQVNYEEFVQMMTAK 448
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 151 bits (382), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 100/143 (69%), Gaps = 2/143 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 123 WIREVDVGSDGKIKYEDFIARMV 145
IRE D+ DG++ YE+F+ M
Sbjct: 122 MIREADIDGDGQVNYEEFVQMMT 144
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ ++AF + DKD G ++ +L ++ S+G+ +E + I EVD +G I + +F+
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 143 RMVAK 147
M K
Sbjct: 69 MMARK 73
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 151 bits (381), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTA--PF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 424 MIREADIDGDGQVNYEEFVQMMTAK 448
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 151 bits (381), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 100/143 (69%), Gaps = 2/143 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 63 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 122
Query: 123 WIREVDVGSDGKIKYEDFIARMV 145
IRE D+ DG++ YE+F+ M
Sbjct: 123 MIREADIDGDGQVNYEEFVQMMT 145
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ ++AF + DKD G ++ +L ++ S+G+ +E + I EVD +G I + +F+
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 69
Query: 143 RMVAK 147
M K
Sbjct: 70 MMARK 74
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 151 bits (381), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 102/145 (70%), Gaps = 4/145 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD GF+S ++LRH++T++GEKL E DE
Sbjct: 64 DFPEFLTMMARKMKDS--EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 121
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M +K
Sbjct: 122 MIREADIDGDGQVNYEEFVTMMTSK 146
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 150 bits (380), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 101/144 (70%), Gaps = 2/144 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 327
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 328 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 387
Query: 123 WIREVDVGSDGKIKYEDFIARMVA 146
IRE D+ DG++ YE+F+ M A
Sbjct: 388 MIREADIDGDGQVNYEEFVQMMTA 411
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ ++AF + DKD G ++ +L ++ S+G+ +E + I EVD +G I + +F+
Sbjct: 275 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 334
Query: 143 RMVAK 147
M K
Sbjct: 335 MMARK 339
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 150 bits (380), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTA--PF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 296 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 355
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 356 DFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 415
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ M AK
Sbjct: 416 MIREADIDGDGQVNYEEFVQMMTAK 440
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 150 bits (379), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 100/145 (68%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAPF 62
L+++QV+ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ ++SE
Sbjct: 4 LTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTV 63
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL +MA+ MK + ++R+AF+V DKD GFVS ++LRH++T +GEKL E DE
Sbjct: 64 DFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDE 123
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IR D DG++ YE+F+ +V+K
Sbjct: 124 MIRAADTDGDGQVNYEEFVRVLVSK 148
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 145 bits (367), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 99/145 (68%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I +LG +MRSLG NPT+A+L+ +I+E
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTI 364
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP+FL +MA+ MK + ++R+AF+V KD G++S + LRH++T++GEKL E DE
Sbjct: 365 DFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDE 424
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE + DG++ YE F+ M AK
Sbjct: 425 MIREAGIDGDGQVNYEQFVQMMTAK 449
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 145 bits (367), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 99/143 (69%), Gaps = 3/143 (2%)
Query: 6 SDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFD 63
+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E D
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 64 FPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEW 123
FP FL +MA+ MK ++R+AF+V DKD G++S ++LRH++T++GEKL E DE
Sbjct: 61 FPEFLTMMARKMKDTD-SEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 119
Query: 124 IREVDVGSDGKIKYEDFIARMVA 146
IRE ++ DG++ YE+F+ M A
Sbjct: 120 IREANIDGDGQVNYEEFVQMMTA 142
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ ++AF + DKD G ++ +L ++ S+G+ +E + I EVD +G I + +F+
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 143 RMVAK 147
M K
Sbjct: 67 MMARK 71
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL-- 58
M + + D ++EAF +FD DG+G I+ +EL +M +LG T ++ +I E +
Sbjct: 68 MARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDG 127
Query: 59 TAPFDFPRFLDLMA 72
++ F+ +M
Sbjct: 128 DGQVNYEEFVQMMT 141
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 140 bits (354), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 95/145 (65%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG + RSLG NPT+A+L+ I+E
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL A+ K + ++R+AF+V DKD G++S ++LRH+ T++GEKL E DE
Sbjct: 64 DFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDE 123
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ AK
Sbjct: 124 XIREADIDGDGQVNYEEFVQXXTAK 148
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 140 bits (352), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 95/145 (65%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG + RSLG NPT+A+L+ I+E
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
+FP FL A+ K + ++R+AF+V DKD G++S ++LRH+ T++GEKL E DE
Sbjct: 64 NFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDE 123
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ AK
Sbjct: 124 XIREADIDGDGQVNYEEFVQXXTAK 148
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 140 bits (352), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 95/145 (65%), Gaps = 2/145 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG + RSLG NPT+A+L+ I+E
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 64
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DFP FL A+ K + ++R+AF+V DKD G++S ++LRH+ T++GEKL E D+
Sbjct: 65 DFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQ 124
Query: 123 WIREVDVGSDGKIKYEDFIARMVAK 147
IRE D+ DG++ YE+F+ AK
Sbjct: 125 XIREADIDGDGQVNYEEFVQXXTAK 149
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 131 bits (329), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 94/144 (65%), Gaps = 2/144 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
LS++Q+ KEAF LFD DGDG I EL ++RSL NPT+ +L+ +ISE
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
+F FL LMAK +K + +L++AFKV DKD G++S S+LRH++ ++GEKL E ++
Sbjct: 64 EFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQ 123
Query: 123 WIREVDVGSDGKIKYEDFIARMVA 146
I+E D+ DG++ YE+F+ M+
Sbjct: 124 MIKEADLDGDGQVNYEEFVKMMMT 147
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 84 LRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIAR 143
++AF + DKD G ++V +L ++ S+ + E + I EVD +G I++++F++
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
Query: 144 MVAK 147
M K
Sbjct: 72 MAKK 75
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 130 bits (327), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 93/140 (66%), Gaps = 2/140 (1%)
Query: 4 DLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAP 61
+L+++Q++ K+AF FD +G GKIA ELG LMR+LG NPT+A+L+ +I+E
Sbjct: 3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQ 62
Query: 62 FDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFD 121
+F F +MAK M+ + ++R+AFK+ D+D GF+S ++LR ++ ++GEK+ E D
Sbjct: 63 LNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEID 122
Query: 122 EWIREVDVGSDGKIKYEDFI 141
E IRE D DG I YE+F+
Sbjct: 123 EMIREADFDGDGMINYEEFV 142
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 36/65 (55%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ +DAF DK+ TG ++ +L ++ ++G+ +E + I E + ++G++ + +F
Sbjct: 11 EFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCG 70
Query: 143 RMVAK 147
M +
Sbjct: 71 IMAKQ 75
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 122 bits (307), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 98/146 (67%), Gaps = 3/146 (2%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL-- 58
M ++L+++Q++ KEAF LFD D G I+ SEL +MRSLG +P++A++ +++E +
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 59 TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
+F FL LM++ +K +++L +AFKV DK+ G +S ++L+H+LTSIGEKL +
Sbjct: 61 NHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 120
Query: 119 EFDEWIREVDVGSDGKIKYEDFIARM 144
E DE +REV GS G+I + F A +
Sbjct: 121 EVDEMLREVSDGS-GEINIKQFAALL 145
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 120 bits (300), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 96/141 (68%), Gaps = 3/141 (2%)
Query: 4 DLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAP 61
+L+++Q++ KEAF LFD D +G I+ SEL +MRSLG +P++A++ +++E +
Sbjct: 4 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 63
Query: 62 FDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFD 121
+F FL LM++ +K +++L +AFKV DK+ G +S ++L+H+LTSIGEKL +E D
Sbjct: 64 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVD 123
Query: 122 EWIREVDVGSDGKIKYEDFIA 142
+ +REV GS G+I + F A
Sbjct: 124 DMLREVSDGS-GEINIQQFAA 143
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 40/62 (64%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ ++AF + DKDN G +S S+L ++ S+G +E ++ + E+DV + +I++ +F+A
Sbjct: 12 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 71
Query: 143 RM 144
M
Sbjct: 72 LM 73
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 119 bits (299), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 97/143 (67%), Gaps = 3/143 (2%)
Query: 4 DLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAP 61
+L+++Q++ KEAF LFD D +G I+ SEL +MRSLG +P++A++ +++E +
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 62 FDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFD 121
+F FL LM++ +K +++L +AFKV DK+ G +S ++L+H+LTSIGEKL +E D
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVD 122
Query: 122 EWIREVDVGSDGKIKYEDFIARM 144
+ +REV GS G+I + F A +
Sbjct: 123 DMLREVSDGS-GEINIQQFAALL 144
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 105 bits (262), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 83/120 (69%), Gaps = 2/120 (1%)
Query: 4 DLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAP 61
+L+++Q++ KEAF LFD D +G I+ SEL +MRSLG +P++A++ +++E +
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 62 FDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFD 121
+F FL LM++ +K +++L +AFKV DK+ G +S ++L+H+LTSIGEKL +E +
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 40/62 (64%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ ++AF + DKDN G +S S+L ++ S+G +E ++ + E+DV + +I++ +F+A
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 143 RM 144
M
Sbjct: 71 LM 72
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 102 bits (253), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 87/145 (60%), Gaps = 5/145 (3%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAPF 62
LS++ ++ K AF +FD DG G I+ ELG +MR LG NPT+ +L +II E E +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 63 DFPRFLDLMAKHMKPEP---FDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSE 119
DF FL +M + MK + + +L D F++ DK+ GF+ + +L IL + GE + +
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 120 FDEWIREVDVGSDGKIKYEDFIARM 144
++ +++ D +DG+I +++F+ M
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 72 AKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGS 131
A+ E + + AF + D D G +S +L ++ +G+ E D I EVD
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 132 DGKIKYEDFIARMV 145
G I +E+F+ MV
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 101 bits (252), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 86/142 (60%), Gaps = 7/142 (4%)
Query: 6 SDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAP-FDF 64
S DQ+ +E F +FD D DGK++ ELG +RSLG NPT A+L +I + +L A FD
Sbjct: 3 SADQI---QECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI--KGQLNAKEFDL 57
Query: 65 PRFLDLMAKHMK-PEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEW 123
F + K +K P +++ DAF+ LDK+ G + ++LR +L ++G+ L SE +E
Sbjct: 58 ATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEEL 117
Query: 124 IREVDVGSDGKIKYEDFIARMV 145
++EV V DG I YE F+ +V
Sbjct: 118 MKEVSVSGDGAINYESFVDMLV 139
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 101 bits (252), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 87/145 (60%), Gaps = 5/145 (3%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAPF 62
LS++ ++ K AF +FD DG G I+ ELG +MR LG NPT+ +L +II E E +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 63 DFPRFLDLMAKHMKPEP---FDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSE 119
DF FL +M + MK + + +L D F++ DK+ GF+ + +L IL + GE + +
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 120 FDEWIREVDVGSDGKIKYEDFIARM 144
++ +++ D +DG+I +++F+ M
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 72 AKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGS 131
A+ E + + AF + D D G +S +L ++ +G+ E D I EVD
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 132 DGKIKYEDFIARMV 145
G I +E+F+ MV
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 100 bits (248), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 87/145 (60%), Gaps = 5/145 (3%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAPF 62
LS++ ++ K AF +FD DG G I+ ELG +MR LG NPT+ +L +II E E +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 63 DFPRFLDLMAKHMKPEP---FDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSE 119
DF FL +M + MK + + +L + F++ DK+ GF+ + +L IL + GE + +
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 130
Query: 120 FDEWIREVDVGSDGKIKYEDFIARM 144
++ +++ D +DG+I +++F+ M
Sbjct: 131 IEDLMKDSDKNNDGRIDFDEFLKMM 155
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 72 AKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGS 131
A+ E + + AF + D D G +S +L ++ +G+ E D I EVD
Sbjct: 7 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 66
Query: 132 DGKIKYEDFIARMV 145
G I +E+F+ MV
Sbjct: 67 SGTIDFEEFLVMMV 80
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 100 bits (248), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 87/145 (60%), Gaps = 5/145 (3%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAPF 62
LS++ ++ K AF +FD DG G I+ ELG +MR LG NPT+ +L +II E E +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 63 DFPRFLDLMAKHMKPEP---FDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSE 119
DF FL +M + MK + + +L + F++ DK+ GF+ + +L IL + GE + +
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 120 FDEWIREVDVGSDGKIKYEDFIARM 144
++ +++ D +DG+I +++F+ M
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 72 AKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGS 131
A+ E + + AF + D D G +S +L ++ +G+ E D I EVD
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 132 DGKIKYEDFIARMV 145
G I +E+F+ MV
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 99.0 bits (245), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 87/145 (60%), Gaps = 5/145 (3%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAPF 62
LS++ ++ K AF +FD DG G I+ ELG +MR LG NPT+ +L +II E E +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 63 DFPRFLDLMAKHMKPEP---FDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSE 119
DF FL +M + MK + + +L + F++ DK+ GF+ + +L IL + GE + +
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEED 133
Query: 120 FDEWIREVDVGSDGKIKYEDFIARM 144
++ +++ D +DG+I +++F+ M
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 72 AKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGS 131
A+ E + + AF + D D G +S +L ++ +G+ E D I EVD
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 132 DGKIKYEDFIARMV 145
G I +E+F+ MV
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 82/142 (57%), Gaps = 11/142 (7%)
Query: 11 SSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFLDL 70
S K+AF+LFD G G+I + +G L+R+ G NPT A++ I E L A D +FL +
Sbjct: 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI--ESTLPAEVDMEQFLQV 62
Query: 71 MAKHMKPEPFD-----RQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIR 125
+ + P FD + F+V DKD TG + V +LR++LTS+GEKL E DE ++
Sbjct: 63 LNR---PNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLK 119
Query: 126 EVDVGSDGKIKYEDFIARMVAK 147
V V DG + Y DF+ ++A
Sbjct: 120 GVPV-KDGMVNYHDFVQMILAN 140
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 79/142 (55%), Gaps = 2/142 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAPF 62
L+++Q ++EAF LFDTDG G I EL + MR+LG P + ++K +ISE + +
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DF FL +M M ++ AF++ D DN+G +++ DLR + +GE L E E
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQE 141
Query: 123 WIREVDVGSDGKIKYEDFIARM 144
I E D D +I ++FI M
Sbjct: 142 MIAEADRNDDNEIDEDEFIRIM 163
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%)
Query: 77 PEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIK 136
E +++R+AF + D D +G + +L+ + ++G + + E + I E+D G I
Sbjct: 23 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTID 82
Query: 137 YEDFIARMVAK 147
+E+F+ M AK
Sbjct: 83 FEEFLTMMTAK 93
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 83/145 (57%), Gaps = 5/145 (3%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAPF 62
LS++ ++ K AF +FD DG G I+ ELG +MR LG PT+ +L +II E E +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 63 DFPRFLDLMAKHMKPEP---FDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSE 119
DF FL +M + MK + + +L + F++ D++ G++ +L I + GE + E
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 120 FDEWIREVDVGSDGKIKYEDFIARM 144
+ +++ D +DG+I +++F+ M
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%)
Query: 72 AKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGS 131
A+ E + + AF + D D G +SV +L ++ +G+ E D I EVD
Sbjct: 7 ARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDG 66
Query: 132 DGKIKYEDFIARMV 145
G I +E+F+ MV
Sbjct: 67 SGTIDFEEFLVMMV 80
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 83/145 (57%), Gaps = 5/145 (3%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAPF 62
LS++ ++ K AF +FD DG G I+ ELG +MR LG PT+ +L +II E E +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 63 DFPRFLDLMAKHMKPEP---FDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSE 119
DF FL +M + MK + + +L + F++ D++ G++ +L I + GE + E
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 120 FDEWIREVDVGSDGKIKYEDFIARM 144
+ +++ D +DG+I +++F+ M
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%)
Query: 72 AKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGS 131
A+ E + + AF + D D G +SV +L ++ +G+ E D I EVD
Sbjct: 7 ARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDG 66
Query: 132 DGKIKYEDFIARMV 145
G I +E+F+ MV
Sbjct: 67 SGTIDFEEFLVMMV 80
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 90.5 bits (223), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 87/149 (58%), Gaps = 10/149 (6%)
Query: 4 DLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII----SEEKLT 59
D S++Q + KEAF LFD GDGKI S+ G +MR+LG NPT A++ ++ S+E
Sbjct: 2 DFSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNL 61
Query: 60 APFDFPRFLDLM---AKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLE 116
F +FL +M AK+ F+ + + +V DK+ G V +++RH+L ++GEK+
Sbjct: 62 KTLKFEQFLPMMQTIAKNKDQGCFEDYV-EGLRVFDKEGNGTVMGAEIRHVLVTLGEKMT 120
Query: 117 PSEFDEWIREVDVGSDGKIKYEDFIARMV 145
E ++ + + S+G I YE+ + RMV
Sbjct: 121 EEEVEQLVAGHE-DSNGCINYEELV-RMV 147
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 90.1 bits (222), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 6 SDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAPFD 63
+++Q ++EAF LFD DG G I EL + MR+LG P + ++K +ISE ++ T +
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 64 FPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEW 123
F FL +M + M + ++ AFK+ D D TG +S +L+ + +GE L E E
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 120
Query: 124 IREVDVGSDGKIKYEDFIARM 144
I E D DG++ ++F+ M
Sbjct: 121 IDEADRDGDGEVSEQEFLRIM 141
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 82 RQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFI 141
+++R+AF + D D TG + V +L+ + ++G + + E + I E+D GK+ + DF+
Sbjct: 6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL 65
Query: 142 ARMVAK 147
M K
Sbjct: 66 TVMTQK 71
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 90.1 bits (222), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 77/142 (54%), Gaps = 2/142 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAPF 62
L+++Q ++EAF LFDTDG G I EL + MR+LG P + ++K +I++ + +
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
DF FL +M M ++ AF++ D D TG +S +L+ + +GE + E E
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQE 121
Query: 123 WIREVDVGSDGKIKYEDFIARM 144
I E D DG++ E+F M
Sbjct: 122 MIDEADRDGDGEVNEEEFFRIM 143
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 38/66 (57%)
Query: 82 RQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFI 141
+++R+AF + D D +G + +L+ + ++G + + E + I ++D G I +E+F+
Sbjct: 8 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFL 67
Query: 142 ARMVAK 147
M AK
Sbjct: 68 QMMTAK 73
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 89.4 bits (220), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 9/150 (6%)
Query: 4 DLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII----SEEKLT 59
+ + DQ+ KEAF LFD GDGKI S+ G +MR+LG NPT A++ ++ S+E +
Sbjct: 3 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKS 62
Query: 60 APFDFPRFLDLM---AKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLE 116
DF FL ++ AK+ ++ L + F+V DK+ G V ++LRH+LT++GEK+
Sbjct: 63 RRVDFETFLPMLQAVAKNRGQGTYEDYL-EGFRVFDKEGNGKVMGAELRHVLTTLGEKMT 121
Query: 117 PSEFDEWIREVDVGSDGKIKYEDFIARMVA 146
E E + S+G I YE F+ +++
Sbjct: 122 EEEV-ETVLAGHEDSNGCINYEAFLKHILS 150
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 86/148 (58%), Gaps = 10/148 (6%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII----SEEKLTA 60
S++Q + KEAF LFD GDGKI S+ G +MR+LG NPT A++ ++ S+E
Sbjct: 1 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 60
Query: 61 PFDFPRFLDLM---AKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEP 117
F +FL +M AK+ F+ + + +V DK+ G V +++RH+L ++GEK+
Sbjct: 61 TLKFEQFLPMMQTIAKNKDQGCFEDYV-EGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTE 119
Query: 118 SEFDEWIREVDVGSDGKIKYEDFIARMV 145
E ++ + + S+G I YE+ + RMV
Sbjct: 120 EEVEQLVAGHE-DSNGCINYEELV-RMV 145
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 82/141 (58%), Gaps = 18/141 (12%)
Query: 14 KEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEE------------KLTAP 61
K+ FTLFD G G IA LG +R++G NPT ++ II+ + ++T
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGL 66
Query: 62 FDF-PRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEF 120
+ + LD K K E F + AF+V DK++TG VSV DLR++LT +GEKL +E
Sbjct: 67 IEVNEKELDATTK-AKTEDFVK----AFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEV 121
Query: 121 DEWIREVDVGSDGKIKYEDFI 141
DE ++ V+V S+G+I Y+ FI
Sbjct: 122 DELLKGVEVDSNGEIDYKKFI 142
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 86.7 bits (213), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFK 89
DFP FL +MA+ MK + ++R+AF+
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFR 90
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ ++AF + DKD G ++ +L ++ S+G+ +E + I EVD +G I + +F+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 143 RMVAK 147
M K
Sbjct: 71 MMARK 75
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 85.5 bits (210), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 89/154 (57%), Gaps = 8/154 (5%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKL 58
M + L +++ ++EAF FD D DG I +LG MR++G PT+ +L + + L
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 60
Query: 59 TAPFDFPRFLDLMAKHMKPEPFD----RQLRDAFKVLDKDNTGFVSVSDLRHILTS-IGE 113
DF F++LM + E D ++LRDAF+ D + G +S S+LR + + +G
Sbjct: 61 GGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGH 120
Query: 114 KLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 147
++ + +E IR+VD+ DG++ +E+F+ RM+++
Sbjct: 121 QVGHRDIEEIIRDVDLNGDGRVDFEEFV-RMMSR 153
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 88/154 (57%), Gaps = 8/154 (5%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKL 58
M + L +++ ++EAF FD D DG I +LG MR++G PT+ +L + + L
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 60
Query: 59 TAPFDFPRFLDLMAKHMKPEPFD----RQLRDAFKVLDKDNTGFVSVSDLRHILTS-IGE 113
DF F++LM + E D ++LRDAF+ D + G +S S+LR + +G
Sbjct: 61 GGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGH 120
Query: 114 KLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 147
++ + +E IR+VD+ DG++ +E+F+ RM+++
Sbjct: 121 QVGHRDIEEIIRDVDLNGDGRVDFEEFV-RMMSR 153
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
++R+AF+V DKD G++S +DLRH++T++GEKL E DE IRE D+ DG++ YEDF+
Sbjct: 8 EIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQ 67
Query: 143 RMVAK 147
M AK
Sbjct: 68 MMTAK 72
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFP 65
D ++EAF +FD DG+G I+ ++L +M +LG T ++ +I E + ++
Sbjct: 4 DSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 63
Query: 66 RFLDLMA 72
F+ +M
Sbjct: 64 DFVQMMT 70
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+D+Q+S KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHMK 76
DFP FL+LMA+ MK
Sbjct: 64 DFPEFLNLMARKMK 77
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ ++AF + DKD G ++ +L ++ S+G+ +E + I EVD +G I + +F+
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 143 RMVAK 147
M K
Sbjct: 71 LMARK 75
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 83.6 bits (205), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 87/152 (57%), Gaps = 8/152 (5%)
Query: 3 KDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTA 60
+ L +++ ++EAF FD D DG I +LG MR++G PT+ +L + + L
Sbjct: 17 RSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGG 76
Query: 61 PFDFPRFLDLMAKHMKPEPFD----RQLRDAFKVLDKDNTGFVSVSDLRHILTS-IGEKL 115
DF F++LM + E D ++LRDAF+ D + G +S S+LR + +G ++
Sbjct: 77 HVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQV 136
Query: 116 EPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 147
+ +E IR+VD+ DG++ +E+F+ RM+++
Sbjct: 137 GHRDIEEIIRDVDLNGDGRVDFEEFV-RMMSR 167
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 83.2 bits (204), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 85/146 (58%), Gaps = 6/146 (4%)
Query: 5 LSDDQVSSMKEAFTLFDTDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAP 61
L+++Q + K AF +F DG I+ ELG +MR LG NPT +L+ +I E E +
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 62 FDFPRFLDLMAKHMKPEP---FDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
DF FL +M + MK + + +L D F++ DK+ G++ + +L+ +L + GE +
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITED 131
Query: 119 EFDEWIREVDVGSDGKIKYEDFIARM 144
+ +E +++ D +DG+I Y++F+ M
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 97 GFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMV 145
G +S +L ++ +G+ P E E I EVD G + +++F+ MV
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 6 SDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTA--PFD 63
DDQVS KEAF LFD++ G I L +++ G A + +E T
Sbjct: 1 GDDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQ 60
Query: 64 FPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEW 123
FP FL +M + MK + LR AF+ D + TG++ + L+ L ++G++L+P EF E+
Sbjct: 61 FPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEF 120
Query: 124 IREVDVGSDGKIKYEDFIARM 144
+ + G+I+Y++FI M
Sbjct: 121 LGITET-EKGQIRYDNFINTM 140
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 82.8 bits (203), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 85/146 (58%), Gaps = 6/146 (4%)
Query: 5 LSDDQVSSMKEAFTLFDTDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAP 61
L+++Q + K AF +F DG I+ ELG +MR LG NPT +L+ +I E E +
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 62 FDFPRFLDLMAKHMKPEP---FDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
DF FL +M + MK + + +L D F++ DK+ G++ + +L+ +L + GE +
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITED 131
Query: 119 EFDEWIREVDVGSDGKIKYEDFIARM 144
+ +E +++ D +DG+I Y++F+ M
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 33.1 bits (74), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 97 GFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMV 145
G +S +L ++ +G+ P E E I EVD G + +++F+ MV
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 82.8 bits (203), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 85/146 (58%), Gaps = 6/146 (4%)
Query: 5 LSDDQVSSMKEAFTLFDTDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAP 61
L+++Q + K AF +F DG I+ ELG +MR LG NPT +L+ +I E E +
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 62 FDFPRFLDLMAKHMKPEP---FDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
DF FL +M + MK + + +L D F++ DK+ G++ + +L+ +L + GE +
Sbjct: 72 VDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITED 131
Query: 119 EFDEWIREVDVGSDGKIKYEDFIARM 144
+ +E +++ D +DG+I Y++F+ M
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 97 GFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMV 145
G +S +L ++ +G+ P E E I EVD G + +++F+ MV
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 82.8 bits (203), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 52/73 (71%)
Query: 75 MKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGK 134
MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE IRE D+ DG+
Sbjct: 2 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 61
Query: 135 IKYEDFIARMVAK 147
+ YE+F+ M AK
Sbjct: 62 VNYEEFVQMMTAK 74
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFP 65
D ++EAF +FD DG+G I+ +EL +M +LG T ++ +I E + ++
Sbjct: 6 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 65
Query: 66 RFLDLMA 72
F+ +M
Sbjct: 66 EFVQMMT 72
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 82.4 bits (202), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 52/73 (71%)
Query: 75 MKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGK 134
MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE IRE D+ DG+
Sbjct: 1 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 60
Query: 135 IKYEDFIARMVAK 147
+ YE+F+ M AK
Sbjct: 61 VNYEEFVQMMTAK 73
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFP 65
D ++EAF +FD DG+G I+ +EL +M +LG T ++ +I E + ++
Sbjct: 5 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 64
Query: 66 RFLDLMA 72
F+ +M
Sbjct: 65 EFVQMMT 71
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 82.0 bits (201), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 51/67 (76%)
Query: 81 DRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
+ +L++AF+V DKD GF+S ++LRH++T++GEKL E DE IRE DV DG+I YE+F
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 62
Query: 141 IARMVAK 147
+ M+AK
Sbjct: 63 VKVMMAK 69
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFP 65
D +KEAF +FD D +G I+ +EL +M +LG T ++ +I E + ++
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 66 RFLDLM 71
F+ +M
Sbjct: 61 EFVKVM 66
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 85/146 (58%), Gaps = 6/146 (4%)
Query: 5 LSDDQVSSMKEAFTLFDTDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAP 61
L+++Q + K AF +F DG I+ ELG +MR LG NPT +L+ +I E E +
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 62 FDFPRFLDLMAKHMKPEP---FDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
DF FL +M + MK + + +L D F++ DK+ G++ + +L+ +L + GE +
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITED 131
Query: 119 EFDEWIREVDVGSDGKIKYEDFIARM 144
+ +E +++ D +DG+I Y++F+ M
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 97 GFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMV 145
G +S +L ++ +G+ P E E I EVD G + +++F+ MV
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 85/146 (58%), Gaps = 6/146 (4%)
Query: 5 LSDDQVSSMKEAFTLFDTDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAP 61
L+++Q + K AF +F DG I+ ELG +MR LG NPT +L+ +I E E +
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 62 FDFPRFLDLMAKHMKPEP---FDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
DF FL +M + MK + + +L D F++ DK+ G++ + +L+ +L + GE +
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITED 131
Query: 119 EFDEWIREVDVGSDGKIKYEDFIARM 144
+ +E +++ D +DG+I Y++F+ M
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 32.7 bits (73), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 97 GFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMV 145
G +S +L ++ +G+ P E E I EVD G + +++F+ MV
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 52/73 (71%)
Query: 75 MKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGK 134
MK + ++R+AF+V DKD G++S ++LRH++T++GEKL E DE IRE D+ DG+
Sbjct: 22 MKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 81
Query: 135 IKYEDFIARMVAK 147
+ YE+F+ M AK
Sbjct: 82 VNYEEFVQMMTAK 94
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFP 65
D ++EAF + D DG+G I+ +EL +M +LG T ++ +I E + ++
Sbjct: 26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 85
Query: 66 RFLDLMA 72
F+ +M
Sbjct: 86 EFVQMMT 92
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 85/146 (58%), Gaps = 6/146 (4%)
Query: 5 LSDDQVSSMKEAFTLFDTDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAP 61
L+++Q + K AF +F DG I+ ELG +MR LG NPT +L+ +I E E +
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 62 FDFPRFLDLMAKHMKPEP---FDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
DF FL +M + MK + + +L D F++ DK+ G++ + +L+ +L + GE +
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITED 131
Query: 119 EFDEWIREVDVGSDGKIKYEDFIARM 144
+ +E +++ D +DG+I Y++++ M
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEWLEFM 157
Score = 32.7 bits (73), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 97 GFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMV 145
G +S +L ++ +G+ P E E I EVD G + +++F+ MV
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 50/67 (74%)
Query: 81 DRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
+ ++R+AF+V DKD G++S ++LRH++T++GEKL E DE IRE D+ DG++ YE+F
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 141 IARMVAK 147
+ M AK
Sbjct: 61 VQMMTAK 67
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 13 MKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDL 70
++EAF +FD DG+G I+ +EL +M +LG T ++ +I E + ++ F+ +
Sbjct: 4 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 63
Query: 71 MA 72
M
Sbjct: 64 MT 65
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 50/67 (74%)
Query: 81 DRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
+ ++R+AF+V DKD G++S ++LRH++T++GEKL E DE IRE D+ DG++ YE+F
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 64
Query: 141 IARMVAK 147
+ M AK
Sbjct: 65 VQMMTAK 71
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFP 65
D ++EAF +FD DG+G I+ +EL +M +LG T ++ +I E + ++
Sbjct: 3 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Query: 66 RFLDLMA 72
F+ +M
Sbjct: 63 EFVQMMT 69
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 80.5 bits (197), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 86/145 (59%), Gaps = 7/145 (4%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII---SEEKLTA-PFD 63
D+++ KEAF LFD GD KI S++G ++R+LG NPT A++ I+ S+E++ A
Sbjct: 1 DEINDFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKIT 60
Query: 64 FPRFLDLM--AKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFD 121
F FL ++ A + K + + +V DK+ G V ++LRH+L ++GEK+ E +
Sbjct: 61 FEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVE 120
Query: 122 EWIREVDVGSDGKIKYEDFIARMVA 146
E ++ + S+G I YE F+ +++
Sbjct: 121 ELMKGQE-DSNGCINYEAFVKHIMS 144
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 84/151 (55%), Gaps = 12/151 (7%)
Query: 5 LSDDQVSSMKEAFTLFD-TDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL---T 59
LS D++ +K+ F LFD DG DG + +LG + R LG NP + ++ K+ +
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 60
Query: 60 APFD--FPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEP 117
PF+ P + LM +AFK D++ GF+S ++LRH+LT++GE+L
Sbjct: 61 LPFEEFLPAYEGLMDCEQGTFA---DYMEAFKTFDREGQGFISGAELRHVLTALGERLSD 117
Query: 118 SEFDEWIREVDVGSD--GKIKYEDFIARMVA 146
+ DE I+ D+ D G +KYEDF+ +++A
Sbjct: 118 EDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 148
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 4 DLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII 53
D + EAF FD +G G I+ +EL ++ +LG + + II
Sbjct: 75 DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 124
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 79.7 bits (195), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 84/151 (55%), Gaps = 12/151 (7%)
Query: 5 LSDDQVSSMKEAFTLFD-TDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL---T 59
LS D++ +K+ F LFD DG DG + +LG + R LG NP + ++ K+ +
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 62
Query: 60 APFD--FPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEP 117
PF+ P + LM +AFK D++ GF+S ++LRH+LT++GE+L
Sbjct: 63 LPFEEFLPAYEGLMDCEQGTFA---DYMEAFKTFDREGQGFISGAELRHVLTALGERLSD 119
Query: 118 SEFDEWIREVDVGSD--GKIKYEDFIARMVA 146
+ DE I+ D+ D G +KYEDF+ +++A
Sbjct: 120 EDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 4 DLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII 53
D + EAF FD +G G I+ +EL ++ +LG + + II
Sbjct: 77 DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 126
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 79.7 bits (195), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 84/151 (55%), Gaps = 12/151 (7%)
Query: 5 LSDDQVSSMKEAFTLFD-TDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL---T 59
LS D++ +K+ F LFD DG DG + +LG + R LG NP + ++ K+ +
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 62
Query: 60 APFD--FPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEP 117
PF+ P + LM +AFK D++ GF+S ++LRH+LT++GE+L
Sbjct: 63 LPFEEFLPAYEGLMDCEQGTFA---DYMEAFKTFDREGQGFISGAELRHVLTALGERLSD 119
Query: 118 SEFDEWIREVDVGSD--GKIKYEDFIARMVA 146
+ DE I+ D+ D G +KYEDF+ +++A
Sbjct: 120 EDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 4 DLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII 53
D + EAF FD +G G I+ +EL ++ +LG + + II
Sbjct: 77 DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 126
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 51/73 (69%)
Query: 75 MKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGK 134
MK + + +L +AFKV D+D G +S ++LRH++T++GEKL E DE IRE D+ DG
Sbjct: 1 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGH 60
Query: 135 IKYEDFIARMVAK 147
I YE+F+ MV+K
Sbjct: 61 INYEEFVRMMVSK 73
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFP 65
D + EAF +FD DG+G I+ +EL +M +LG T ++ +I E + ++
Sbjct: 5 DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYE 64
Query: 66 RFLDLMA 72
F+ +M
Sbjct: 65 EFVRMMV 71
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHMK 76
DFP FL +MA+ MK
Sbjct: 64 DFPEFLTMMARKMK 77
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ ++AF + DKD G ++ +L ++ S+G+ +E + I EVD +G I + +F+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 143 RMVAK 147
M K
Sbjct: 71 MMARK 75
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 84/146 (57%), Gaps = 6/146 (4%)
Query: 5 LSDDQVSSMKEAFTLFDTDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAP 61
L+++Q + K AF +F DG I+ ELG +MR LG NPT +L+ +I E E +
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 62 FDFPRFLDLMAKHMKPEP---FDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
DF FL +M + MK + + +L D F++ DK+ G++ + +L+ +L + GE +
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITED 131
Query: 119 EFDEWIREVDVGSDGKIKYEDFIARM 144
+ +E +++ D +DG+I Y++ + M
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEXLEFM 157
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 97 GFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMV 145
G +S +L ++ +G+ P E E I EVD G + +++F+ MV
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHMK 76
DFP FL +MA+ MK
Sbjct: 64 DFPEFLTMMARKMK 77
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ ++AF + DKD G ++ +L ++ S+G+ +E + I EVD +G I + +F+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 143 RMVAK 147
M K
Sbjct: 71 MMARK 75
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHMK 76
DFP FL +MA+ MK
Sbjct: 64 DFPEFLTMMARKMK 77
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ ++AF + DKD G ++ +L ++ S+G+ +E + I EVD +G I + +F+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 143 RMVAK 147
M K
Sbjct: 71 MMARK 75
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 78/139 (56%), Gaps = 7/139 (5%)
Query: 14 KEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIIS----EEKLTAPFDFPRFLD 69
KEAF LFD GD KI S++G + R+LG NPT A++ I+ EE A F FL
Sbjct: 9 KEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLP 68
Query: 70 LM--AKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREV 127
++ A + K + + +V DK+ G V ++LRH+L ++GEK+ E +E ++
Sbjct: 69 MLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQ 128
Query: 128 DVGSDGKIKYEDFIARMVA 146
+ S+G I YE F+ +++
Sbjct: 129 E-DSNGCINYEAFVKHIMS 146
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 79.0 bits (193), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 78/139 (56%), Gaps = 7/139 (5%)
Query: 14 KEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIIS----EEKLTAPFDFPRFLD 69
KEAF LFD GD KI S++G + R+LG NPT A++ I+ EE A F FL
Sbjct: 11 KEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLP 70
Query: 70 LM--AKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREV 127
++ A + K + + +V DK+ G V ++LRH+L ++GEK+ E +E ++
Sbjct: 71 MLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQ 130
Query: 128 DVGSDGKIKYEDFIARMVA 146
+ S+G I YE F+ +++
Sbjct: 131 E-DSNGCINYEAFVKHIMS 148
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 49/66 (74%)
Query: 81 DRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
+ ++R+AF+V DKD G++S ++LRH++T++GEKL E DE IRE D+ DG++ YE+F
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 141 IARMVA 146
+ M A
Sbjct: 64 VQMMTA 69
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFP 65
D ++EAF +FD DG+G I+ +EL +M +LG T ++ +I E + ++
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 66 RFLDLMA 72
F+ +M
Sbjct: 62 EFVQMMT 68
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
Query: 63 DFPRFLDLMAKHMK 76
DFP FL +MA+ MK
Sbjct: 64 DFPEFLTMMARKMK 77
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ ++AF + DKD G ++ +L ++ S+G+ +E + I EVD DG I + +F+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 143 RMVAK 147
M K
Sbjct: 71 MMARK 75
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 83/150 (55%), Gaps = 12/150 (8%)
Query: 6 SDDQVSSMKEAFTLFD-TDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL---TA 60
S D++ +K+ F LFD DG DG + +LG + R LG NP + ++ K+ +
Sbjct: 1 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSL 60
Query: 61 PFD--FPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
PF+ P + LM +AFK D++ GF+S ++LRH+LT++GE+L
Sbjct: 61 PFEEFLPAYEGLMDCEQGTFA---DYMEAFKTFDREGQGFISGAELRHVLTALGERLSDE 117
Query: 119 EFDEWIREVDVGSD--GKIKYEDFIARMVA 146
+ DE I+ D+ D G +KYEDF+ +++A
Sbjct: 118 DVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 147
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 4 DLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII 53
D + EAF FD +G G I+ +EL ++ +LG + + II
Sbjct: 74 DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 123
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 83/150 (55%), Gaps = 12/150 (8%)
Query: 6 SDDQVSSMKEAFTLFD-TDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL---TA 60
S D++ +K+ F LFD DG DG + +LG + R LG NP + ++ K+ +
Sbjct: 1 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSL 60
Query: 61 PFD--FPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
PF+ P + LM +AFK D++ GF+S ++LRH+LT++GE+L
Sbjct: 61 PFEEFLPAYEGLMDCEQGTFA---DYMEAFKTFDREGQGFISGAELRHVLTALGERLSDE 117
Query: 119 EFDEWIREVDVGSD--GKIKYEDFIARMVA 146
+ DE I+ D+ D G +KYEDF+ +++A
Sbjct: 118 DVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 147
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 4 DLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII 53
D + EAF FD +G G I+ +EL ++ +LG + + II
Sbjct: 74 DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 123
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 81/152 (53%), Gaps = 13/152 (8%)
Query: 5 LSDDQVSSMKEAFTLFDT-DGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPF- 62
LS +QV ++ AF F+T +G G+++ ++GI++ LG T++ ++ +I E PF
Sbjct: 7 LSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDE---FDPFG 63
Query: 63 ----DFPRF----LDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEK 114
DF F + + + PE ++LR+AF++ DK+ G++S +R IL + E
Sbjct: 64 NGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDET 123
Query: 115 LEPSEFDEWIREVDVGSDGKIKYEDFIARMVA 146
L + D I E+D G + +E+F+ M
Sbjct: 124 LSSEDLDAMIDEIDADGSGTVDFEEFMGVMTG 155
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 9 QVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFL 68
Q+ KEAF + D + DG I +L ++ S+G NPT L+ ++SE P +F FL
Sbjct: 5 QIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE--APGPINFTMFL 62
Query: 69 DLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVD 128
+ + + + +R+AF D++ +GF+ LR +LT++G++ E DE RE
Sbjct: 63 TMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAP 122
Query: 129 VGSDGKIKYEDF 140
+ G Y +F
Sbjct: 123 IDKKGNFNYVEF 134
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHM 75
DFP FL +MA+ M
Sbjct: 64 DFPEFLTMMARKM 76
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ ++AF + DKD G ++ +L ++ S+G+ +E + I EVD +G I + +F+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 143 RMVAK 147
M K
Sbjct: 71 MMARK 75
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHM 75
DFP FL +MA+ M
Sbjct: 64 DFPEFLTMMARKM 76
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ ++AF + DKD G ++ +L ++ S+G+ +E + I EVD +G I + +F+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 143 RMVAK 147
M K
Sbjct: 71 MMARK 75
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 82/151 (54%), Gaps = 12/151 (7%)
Query: 5 LSDDQVSSMKEAFTLFD-TDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL---T 59
LS D++ +K+ F LFD DG DG + +LG + R LG NP + ++ K+ +
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 62
Query: 60 APFD--FPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEP 117
PF+ P + LM +AFK D++ GF+S ++LRH+L+ +GE+L
Sbjct: 63 LPFEEFLPAYEGLMDCEQGTFA---DYMEAFKTFDREGQGFISGAELRHVLSGLGERLSD 119
Query: 118 SEFDEWIREVDVGSD--GKIKYEDFIARMVA 146
E DE I D+ D G +KYE+F+ +++A
Sbjct: 120 EEVDEIINLTDLQEDLEGNVKYEEFVKKVMA 150
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 4 DLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIIS 54
D + EAF FD +G G I+ +EL ++ LG + ++ II+
Sbjct: 77 DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIIN 127
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+L+D DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHMK 76
DFP FL +MA+ MK
Sbjct: 64 DFPEFLTMMARIMK 77
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ ++AF + DKD G ++ +L ++ S+G +E + I EVD +G I + +F+
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 143 RMV 145
M
Sbjct: 71 MMA 73
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 86/151 (56%), Gaps = 12/151 (7%)
Query: 5 LSDDQVSSMKEAFTLFD-TDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL---T 59
LS D++ +K+ F LF DG DG + +LG + R LG NP + ++ K+ +
Sbjct: 3 LSQDEIDDLKDVFELFAFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 62
Query: 60 APFD--FPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEP 117
PF+ P + LM + F + +AFK D++ GF+S ++LRH+LT++GE+L
Sbjct: 63 LPFEEFLPAYEGLM--DCEQGTFADYM-EAFKTFDREGQGFISGAELRHVLTALGERLSD 119
Query: 118 SEFDEWIREVDVGSD--GKIKYEDFIARMVA 146
+ DE I+ D+ D G +KYEDF+ +++A
Sbjct: 120 EDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 4 DLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII 53
D + EAF FD +G G I+ +EL ++ +LG + + II
Sbjct: 77 DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 126
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%)
Query: 81 DRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
+ ++R+AF+V DKD G++S ++LRH++T++GEKL E DE IRE D+ DG++ YE+F
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 141 IARM 144
+ M
Sbjct: 64 VQMM 67
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFP 65
D ++EAF +FD DG+G I+ +EL +M +LG T ++ +I E + ++
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 66 RFLDLM 71
F+ +M
Sbjct: 62 EFVQMM 67
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 12/151 (7%)
Query: 5 LSDDQVSSMKEAFTLFD-TDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL---T 59
LS D++ +KE F LFD DG DG + ++G + R LG NP + ++ K+ +
Sbjct: 4 LSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAVGGTHKMGEKS 63
Query: 60 APFD--FPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEP 117
PF+ P + LM +AFK D++ GF+S ++LRH+L+ +GE+L
Sbjct: 64 LPFEEFLPAYEGLMDCEQGTYA---DYMEAFKTFDREGQGFISGAELRHVLSGLGERLSD 120
Query: 118 SEFDEWIREVDVGSD--GKIKYEDFIARMVA 146
E DE I D+ D G +KYE+F+ +++
Sbjct: 121 EEVDEIINLTDLQEDLEGNVKYEEFVKKVMT 151
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 4 DLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIIS 54
D + EAF FD +G G I+ +EL ++ LG + ++ II+
Sbjct: 78 DCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIIN 128
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 12/151 (7%)
Query: 5 LSDDQVSSMKEAFTLFD-TDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL---T 59
LS D++ +KE F LFD DG DG + ++G + R LG NP + ++ K+ +
Sbjct: 3 LSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAVGGTHKMGEKS 62
Query: 60 APFD--FPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEP 117
PF+ P + LM +AFK D++ GF+S ++LRH+L+ +GE+L
Sbjct: 63 LPFEEFLPAYEGLMDCEQGTYA---DYMEAFKTFDREGQGFISGAELRHVLSGLGERLSD 119
Query: 118 SEFDEWIREVDVGSD--GKIKYEDFIARMVA 146
E DE I D+ D G +KYE+F+ +++
Sbjct: 120 EEVDEIINLTDLQEDLEGNVKYEEFVKKVMT 150
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 4 DLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIIS 54
D + EAF FD +G G I+ +EL ++ LG + ++ II+
Sbjct: 77 DCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIIN 127
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 75.9 bits (185), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 63 DFPRFLDLMAK 73
DFP FL +MA+
Sbjct: 64 DFPEFLTMMAR 74
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ ++AF + DKD G ++ +L ++ S+G+ +E + I EVD +G I + +F+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 143 RMVAK 147
M K
Sbjct: 71 MMARK 75
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 75.9 bits (185), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
L+++Q++ KEAF+LFD DGDG I ELG +MRSLG NPT+A+L+ +I+E
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 63 DFPRFLDLMAK 73
DFP FL +MA+
Sbjct: 65 DFPEFLTMMAR 75
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ ++AF + DKD G ++ +L ++ S+G+ +E + I EVD +G I + +F+
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 143 RMVAK 147
M K
Sbjct: 72 MMARK 76
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 48/66 (72%)
Query: 81 DRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
+ +L++AFKV DKD G++S S+LRH++ ++GEKL E ++ I+E D+ DG++ YE+F
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 62
Query: 141 IARMVA 146
+ M+
Sbjct: 63 VKMMMT 68
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFP 65
D +KEAF +FD D +G I+ SEL +M +LG T +++ +I E L ++
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 66 RFLDLM 71
F+ +M
Sbjct: 61 EFVKMM 66
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE----- 55
+ +L ++Q + EAF+LFD + DG + EL + M++LG + ++ +I E
Sbjct: 13 LNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEG 72
Query: 56 EKLTAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKL 115
L DF ++ + K +K +P D +++ AF++ D D+TG +S+ +LR + +GE L
Sbjct: 73 RHLMKYDDF--YIVMGEKILKRDPLD-EIKRAFQLFDDDHTGKISIKNLRRVAKELGETL 129
Query: 116 EPSEFDEWIREVDVGSDGKIKYEDFIA 142
E I E D+ DG+I +FIA
Sbjct: 130 TDEELRAMIEEFDLDGDGEINENEFIA 156
Score = 33.5 bits (75), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 82 RQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFI 141
+++ +AF + D +N GF+ +L+ + ++G +L E + I E D +KY+DF
Sbjct: 23 QEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFY 82
Query: 142 ARMVAK 147
M K
Sbjct: 83 IVMGEK 88
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 74 HMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDG 133
HM + + +L++AFKV DKD G++S S+LRH++ ++GEKL E ++ I+E D+ DG
Sbjct: 2 HMDTDA-EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDG 60
Query: 134 KIKYEDFIARMVA 146
++ YE+F+ M+
Sbjct: 61 QVNYEEFVKMMMT 73
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFP 65
D +KEAF +FD D +G I+ SEL +M +LG T +++ +I E L ++
Sbjct: 6 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 65
Query: 66 RFLDLM 71
F+ +M
Sbjct: 66 EFVKMM 71
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 4 DLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLG--GNPTQAQLKSIISEEKLTAP 61
+L+++Q ++EAF LFD DG G I EL + R+LG + + +++ T
Sbjct: 24 ELTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGK 83
Query: 62 FDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFD 121
+F FL + + + ++ AFK+ D D TG +S +L+ + +GE L E
Sbjct: 84 XNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 143
Query: 122 EWIREVDVGSDGKIKYEDFI 141
E I E D DG++ ++F+
Sbjct: 144 EXIDEADRDGDGEVSEQEFL 163
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 11/151 (7%)
Query: 5 LSDDQVSSMKEAFTLFD-TDG-DGKIAPSELGILMRSLGGNPTQAQLKSI-----ISEEK 57
L+ D++ ++E F LFD DG DG + +++G L+R LG NPT+AQ+ + E+
Sbjct: 3 LTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMGEKA 62
Query: 58 LTAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEP 117
P + ++ +K + +AFK D++ G +S +++R++L +GE++
Sbjct: 63 YKLEEILPIYEEMSSKDTGTAA--DEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITE 120
Query: 118 SEFDEWIREVDVGS--DGKIKYEDFIARMVA 146
+ ++ D+ DG IKYED + +++A
Sbjct: 121 DQCNDIFTFCDIREDIDGNIKYEDLMKKVMA 151
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE----- 55
+ +L ++Q + EAF+LFD + DG + EL + ++LG + ++ +I E
Sbjct: 13 LNSELLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEG 72
Query: 56 EKLTAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKL 115
L DF ++ K +K +P D +++ AF++ D D+TG +S+ +LR + +GE L
Sbjct: 73 RHLXKYDDF--YIVXGEKILKRDPLD-EIKRAFQLFDDDHTGKISIKNLRRVAKELGETL 129
Query: 116 EPSEFDEWIREVDVGSDGKIKYEDFIA 142
E I E D+ DG+I +FIA
Sbjct: 130 TDEELRAXIEEFDLDGDGEINENEFIA 156
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAPF 62
LS++ ++ K AF +FD DG G I+ ELG +MR LG NPT+ +L +II E E +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTI 73
Query: 63 DFPRFLDLMAKHMKPEP 79
DF FL +M + MK +
Sbjct: 74 DFEEFLVMMVRQMKEDA 90
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 72 AKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGS 131
A+ E + + AF + D D G +S +L ++ +G+ E D I EVD
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDG 69
Query: 132 DGKIKYEDFIARMV 145
G I +E+F+ MV
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAPF 62
LS++ ++ K AF +FD DG G I+ ELG +MR LG NPT+ +L +II E E +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 63 DFPRFLDLMAKHMKPEP 79
DF FL +M + MK +
Sbjct: 74 DFEEFLVMMVRQMKEDA 90
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 72 AKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGS 131
A+ E + + AF + D D G +S +L ++ +G+ E D I EVD
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 132 DGKIKYEDFIARMV 145
G I +E+F+ MV
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
LS++Q+ KEAF LFD DGDG I EL ++RSL NPT+ +L+ +ISE
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHMK 76
+F FL LMAK +K
Sbjct: 64 EFDEFLSLMAKKVK 77
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 84 LRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIAR 143
++AF + DKD G ++V +L ++ S+ + E + I EVD +G I++++F++
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
Query: 144 MVAK 147
M K
Sbjct: 72 MAKK 75
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAPF 62
LS++ ++ K AF +FD DG G I+ ELG +MR LG NPT+ +L +II E E +
Sbjct: 3 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 62
Query: 63 DFPRFLDLMAKHMK 76
DF FL +M + MK
Sbjct: 63 DFEEFLVMMVRQMK 76
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ + AF + D D G +S +L ++ +G+ E D I EVD G I +E+F+
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 69
Query: 143 RMV 145
MV
Sbjct: 70 MMV 72
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
LS++++ +KE F + DTD G I EL ++ +G ++++K ++ + +
Sbjct: 4 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 63
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
D+ F+ H+ + L AF DKD +G++++ +++ G L+ D+
Sbjct: 64 DYGEFI-AATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDD 120
Query: 123 WIREVDVGSDGKIKYEDFIARM 144
I+E+D +DG+I Y +F A M
Sbjct: 121 MIKEIDQDNDGQIDYGEFAAMM 142
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 84 LRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIAR 143
L++ FK++D DN+G ++ +L+ L +G +L SE + + D+ G I Y +FIA
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 71
Query: 144 MV 145
V
Sbjct: 72 TV 73
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 4 DLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAP 61
+L+++Q++ KEAF LFD D +G I+ SEL +MRSLG +P++A++ +++E +
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 62 FDFPRFLDLMAKHMK 76
+F FL LM++ +K
Sbjct: 63 IEFSEFLALMSRQLK 77
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 40/62 (64%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ ++AF + DKDN G +S S+L ++ S+G +E ++ + E+DV + +I++ +F+A
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 143 RM 144
M
Sbjct: 71 LM 72
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPF 62
LS++Q+ KEAF LFD DGDG I EL ++RSL NPT+ +L+ +ISE
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 63 DFPRFLDLMAKHM 75
+F FL LMAK +
Sbjct: 64 EFDEFLSLMAKKV 76
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 84 LRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIAR 143
++AF + DKD G ++V +L ++ S+ + E + I EVD +G I++++F++
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
Query: 144 MVAK 147
M K
Sbjct: 72 MAKK 75
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 47 AQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDL 104
A+L+ +I+E DFP FL +MA+ MK + ++R+AF+V DKD G++S ++L
Sbjct: 1 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 60
Query: 105 RHILTSIG 112
RH++T++G
Sbjct: 61 RHVMTNLG 68
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 1 MGKDLSD-DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLG 41
M + + D D ++EAF +FD DG+G I+ +EL +M +LG
Sbjct: 27 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 68
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAPF 62
LS++ ++ K AF +FD DG G I+ LG +MR LG NPT+ +L +II E E +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 63 DFPRFLDLMAKHMKPEP 79
DF FL +M + MK +
Sbjct: 74 DFEEFLVMMVRQMKEDA 90
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%)
Query: 72 AKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGS 131
A+ E + + AF + D D G +S L ++ +G+ E D I EVD
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 132 DGKIKYEDFIARMV 145
G I +E+F+ MV
Sbjct: 70 SGTIDFEEFLVMMV 83
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 43/55 (78%)
Query: 87 AFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFI 141
AF+V DK++TG VSV DLR++LT +GEKL +E DE ++ V+V S+G+I Y+ FI
Sbjct: 10 AFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 64
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 16 AFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIIS--EEKLTAPFDFPRFLD 69
AF +FD + GK++ +L ++ LG T A++ ++ E D+ +F++
Sbjct: 10 AFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 65
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL-- 58
+ + LS+++++ +KE F D D G+I EL ++ +G N ++++ + +
Sbjct: 17 IAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDN 76
Query: 59 TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
+ D+ F+ H+ + L AF DKD +G+++ +L+ G +E
Sbjct: 77 SGTIDYKEFI-AATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDV 133
Query: 119 EFDEWIREVDVGSDGKIKYEDFIA 142
+E R+VD +DG+I Y +F+A
Sbjct: 134 RIEELXRDVDQDNDGRIDYNEFVA 157
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDF 64
L Q+ MKEAFT+ D + DG I ++L + SLG P +L +++ E P +F
Sbjct: 13 LPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA--PGPLNF 70
Query: 65 PRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWI 124
FL + + + + +R+AF + D+ +T +++ ++ +L ++G+ E
Sbjct: 71 TMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTF 130
Query: 125 REVDVGSDGKIKYEDFIA 142
+E V GK Y F+A
Sbjct: 131 KEAPV-EGGKFDYVRFVA 147
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 84 LRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIAR 143
L+ AF+ D+D G ++V +LR + +G+ L E D IRE DV DG++ YE+F AR
Sbjct: 8 LQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF-AR 66
Query: 144 MVAK 147
M+A+
Sbjct: 67 MLAQ 70
Score = 32.7 bits (73), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 10 VSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE 55
+ ++ AF FD DGDG I EL M LG Q +L ++I E
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIRE 50
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDF 64
LS Q+ +KEAFT+ D D DG I +L + SLG P +L +++ E +F
Sbjct: 10 LSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKE--CPGQLNF 67
Query: 65 PRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSE 119
FL L + + + LR+AF + D+D GF+ L+ +L ++G+ E
Sbjct: 68 TAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEE 122
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAPF 62
L+++Q ++EAF LFDTDG G I EL + MR+LG P + ++K +ISE + +
Sbjct: 24 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 83
Query: 63 DFPRFLDLMAKHM 75
DF FL +M M
Sbjct: 84 DFEEFLTMMTAKM 96
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%)
Query: 77 PEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIK 136
E +++R+AF + D D +G + +L+ + ++G + + E + I E+D G I
Sbjct: 25 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTID 84
Query: 137 YEDFIARMVAK 147
+E+F+ M AK
Sbjct: 85 FEEFLTMMTAK 95
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDF 64
L Q+ MKEAF++ D D DG ++ ++ + LG P +L +++ E P +F
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE--APGPLNF 58
Query: 65 PRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWI 124
FL + + + + +R+AF + D+ T +++ ++ +L ++G+ E
Sbjct: 59 TMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTF 118
Query: 125 REVDVGSDGKIKYEDFIA 142
+E V GK Y F A
Sbjct: 119 KEAPV-EGGKFDYVKFTA 135
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDF 64
L Q+ MKEAF++ D D DG ++ ++ + LG P +L +++ E P +F
Sbjct: 12 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE--APGPLNF 69
Query: 65 PRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWI 124
FL + + + + +R+AF + D+ T +++ ++ +L ++G+ E
Sbjct: 70 TMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTF 129
Query: 125 REVDVGSDGKIKYEDFIA 142
+E V GK Y F A
Sbjct: 130 KEAPV-EGGKFDYVKFTA 146
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDF 64
L Q+ MKEAF++ D D DG ++ ++ + LG P +L +++ E P +F
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE--APGPLNF 58
Query: 65 PRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWI 124
FL + + + + +R+AF + D+ T +++ ++ +L ++G+ E
Sbjct: 59 TMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTF 118
Query: 125 REVDVGSDGKIKYEDFIA 142
+E V GK Y F A
Sbjct: 119 KEAPV-EGGKFDYVKFTA 135
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Query: 9 QVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFL 68
Q+ MKEAF++ D D DG ++ ++ + LG P +L +++ E P +F FL
Sbjct: 2 QIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE--APGPLNFTMFL 59
Query: 69 DLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVD 128
+ + + + +R+AF + D+ T +++ ++ +L ++G+ E +E
Sbjct: 60 SIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAP 119
Query: 129 VGSDGKIKYEDFIA 142
V GK Y F A
Sbjct: 120 V-EGGKFDYVKFTA 132
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Query: 9 QVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFL 68
Q+ MKEAF++ D D DG ++ ++ + LG P +L +++ E P +F FL
Sbjct: 4 QIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE--APGPLNFTMFL 61
Query: 69 DLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVD 128
+ + + + +R+AF + D+ T +++ ++ +L ++G+ E +E
Sbjct: 62 SIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAP 121
Query: 129 VGSDGKIKYEDFIA 142
V GK Y F A
Sbjct: 122 V-EGGKFDYVKFTA 134
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%)
Query: 77 PEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREV 127
P+ +++++AF ++D D GFVS D++ I +G + E ++E
Sbjct: 1 PQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA 51
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Query: 10 VSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFLD 69
+ MKEAFT+ D + DG I ++L SLG P +L +++ E P +F FL
Sbjct: 1 MQEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEA--PGPLNFTMFLS 58
Query: 70 LMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDV 129
+ + + + +R+AF + D+D T +++ ++ +L ++G+ E +E V
Sbjct: 59 IFSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPV 118
Query: 130 GSDGKIKYEDFIA 142
GK Y F+A
Sbjct: 119 -EGGKFDYVRFVA 130
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLT-APFDFPR 66
D +++ AF +FD D K+ + L+ ++G N + +++ E + FD+ R
Sbjct: 68 DSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEGGKFDYVR 127
Query: 67 FLDLM 71
F+ ++
Sbjct: 128 FVAMI 132
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 3 KDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIIS--EEKLTA 60
K L+ ++ KEAF LFD D D K+ ELG +MR+LG NPT+ ++ I+ ++ +
Sbjct: 6 KVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSG 65
Query: 61 PFDFPRFLDLMAKH 74
FD FL +M ++
Sbjct: 66 KFDQETFLTIMLEY 79
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 35/64 (54%)
Query: 82 RQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFI 141
++ ++AF++ DKDN ++ +L ++ ++G + E +++ D + GK E F+
Sbjct: 14 QEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFL 73
Query: 142 ARMV 145
M+
Sbjct: 74 TIML 77
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Query: 10 VSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFLD 69
+ MKEAFT+ D + DG I ++L + SLG P +L +++ E P +F FL
Sbjct: 22 MQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA--PGPLNFTMFLS 79
Query: 70 LMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDV 129
+ + + + +R+AF + D+ +T +++ ++ +L ++G+ E +E V
Sbjct: 80 IFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPV 139
Query: 130 GSDGKIKYEDFIA 142
GK Y F+A
Sbjct: 140 -EGGKFDYVRFVA 151
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 12/51 (23%), Positives = 32/51 (62%)
Query: 77 PEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREV 127
P+ +++++AF ++D++ GF+ ++DL+ + +S+G + E ++E
Sbjct: 18 PQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA 68
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Query: 10 VSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFLD 69
+ MKEAFT+ D + DG I ++L + SLG P +L +++ E P +F FL
Sbjct: 22 MQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE--APGPLNFTMFLS 79
Query: 70 LMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDV 129
+ + + + +R+AF + D+ +T +++ ++ +L ++G+ E +E V
Sbjct: 80 IFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPV 139
Query: 130 GSDGKIKYEDFIA 142
GK Y F+A
Sbjct: 140 -EGGKFDYVRFVA 151
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 12/51 (23%), Positives = 32/51 (62%)
Query: 77 PEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREV 127
P+ +++++AF ++D++ GF+ ++DL+ + +S+G + E ++E
Sbjct: 18 PQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA 68
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 9 QVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFL 68
QV KEAF L D D DG I+ +++ SLG T+ +L S+++E P +F FL
Sbjct: 55 QVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAE--APGPINFTMFL 112
Query: 69 DLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVD 128
+ + + + +AF + D+ + G L+ LT+ GEK E D+ + E
Sbjct: 113 TIFGDRIAGTDEEDVIVNAFNLFDEGD-GKCKEETLKRSLTTWGEKFSQDEVDQALSEAP 171
Query: 129 VGSDGKIKYEDFIARMVAK 147
+ +G I + F A+++ K
Sbjct: 172 IDGNGLIDIKKF-AQILTK 189
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 4 DLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAP 61
+L+++Q ++EAF LFD DG G I EL + MR+LG P + ++K +ISE ++ T
Sbjct: 24 ELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGK 83
Query: 62 FDFPRFLDLMAKHM 75
+F FL +M + M
Sbjct: 84 MNFGDFLTVMTQKM 97
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 73 KHMKPEP-----FDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREV 127
K M P+P +++R+AF + D D TG + V +L+ + ++G + + E + I E+
Sbjct: 17 KRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEI 76
Query: 128 DVGSDGKIKYEDFIARMVAK 147
D GK+ + DF+ M K
Sbjct: 77 DKEGTGKMNFGDFLTVMTQK 96
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 81 DRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
+R+L++AF+VLDK+ G + V LR IL S+G++L E + I E D G + YE+F
Sbjct: 6 ERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEF 65
Query: 141 IARMVA 146
M++
Sbjct: 66 KCLMMS 71
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 13 MKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDL 70
+KEAF + D + G I L +++SLG T+ +++++I+E + D+ F L
Sbjct: 9 LKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKCL 68
Query: 71 M 71
M
Sbjct: 69 M 69
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 5 LSDDQVSSMKEAFTLFDTDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAP 61
L+D+Q + K AF +F D DG I+ ELG +MR LG NPT +L+ +I E E +
Sbjct: 12 LTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 62 FDFPRFLDLMAKHMK 76
DF FL +M + MK
Sbjct: 72 VDFDEFLVMMVRCMK 86
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 82 RQLRDAFKVLDKD-NTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
+ + AF + +D G +S +L ++ +G+ P E E I EVD G + +++F
Sbjct: 18 NEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 141 IARMV 145
+ MV
Sbjct: 78 LVMMV 82
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 5 LSDDQVSSMKEAFTLFDTDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAP 61
L+++Q + K AF +F D DG I+ ELG +MR LG NPT +L+ +I E E +
Sbjct: 12 LTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 62 FDFPRFLDLMAKHMK 76
DF FL +M + MK
Sbjct: 72 VDFDEFLVMMVRCMK 86
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 82 RQLRDAFKVLDKD-NTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
+ + AF + +D G +S +L ++ +G+ P E E I EVD G + +++F
Sbjct: 18 NEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 141 IARMV 145
+ MV
Sbjct: 78 LVMMV 82
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Query: 9 QVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGG-NPTQAQLKSIISEEKLTAPFDFPRF 67
++ KEAFT+ D + DG I +L ++G N +L ++I E + P +F F
Sbjct: 5 EIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKE--ASGPINFTVF 62
Query: 68 LDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSE 119
L + + +K + + AFKVLD D G + S L +LT+ G + P E
Sbjct: 63 LTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEE 114
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Query: 9 QVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGG-NPTQAQLKSIISEEKLTAPFDFPRF 67
++ KEAFT+ D + DG I +L ++G N +L ++I E + P +F F
Sbjct: 23 EIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKE--ASGPINFTVF 80
Query: 68 LDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSE 119
L + + +K + + AFKVLD D G + S L +LT+ G + P E
Sbjct: 81 LTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEE 132
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 4 DLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAP 61
D+ +D++ ++EAF +FD DG+G I+ ELG MRSLG P + +L+ II +
Sbjct: 29 DIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQ 88
Query: 62 FDFPRFLDLMA 72
DF F+ L+
Sbjct: 89 VDFEEFVTLLG 99
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 77 PEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIK 136
PE ++R+AFKV D+D GF+S +L + S+G E + I+ +D+ DG++
Sbjct: 31 PEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVD 90
Query: 137 YEDFIA 142
+E+F+
Sbjct: 91 FEEFVT 96
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Query: 9 QVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGG-NPTQAQLKSIISEEKLTAPFDFPRF 67
Q+ KEAFT+ D + DG I +L ++G N +L ++I E + P +F F
Sbjct: 10 QIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA--SGPINFTVF 67
Query: 68 LDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSE 119
L + + +K + + AFKVLD D G + S L +LT+ ++ P E
Sbjct: 68 LTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEE 119
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 36/159 (22%)
Query: 6 SDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFP 65
+D V +K F + D DG G I T+ QLK + ++ L P++F
Sbjct: 47 NDYDVEKLKSTFLVLDEDGKGYI----------------TKEQLKKGLEKDGLKLPYNFD 90
Query: 66 RFLD--------------LMAKHMKPEPFDRQL-RDAFKVLDKDNTGFVSVSDLRHILTS 110
LD +A + + ++L AF+V D DN G ++ ++L HIL +
Sbjct: 91 LLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYN 150
Query: 111 IGEKLEPSEFD-----EWIREVDVGSDGKIKYEDFIARM 144
+K ++ D IR+VD +DGKI + +F M
Sbjct: 151 GNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMM 189
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 63 DFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDE 122
+F FL +M + M + ++ AFK+ D D TG +S +L+ + +GE L E E
Sbjct: 2 NFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQE 61
Query: 123 WIREVDVGSDGKIKYEDFIARM 144
I E D DG++ ++F+ M
Sbjct: 62 MIDEADRDGDGEVSEQEFLRIM 83
Score = 32.7 bits (73), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 16 AFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE 55
AF LFD D GKI+ L + + LG N T +L+ +I E
Sbjct: 26 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDE 65
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 82 RQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFI 141
++LR+AF++ DK+ G++S +R IL + E L + D I E+D G + +E+F+
Sbjct: 3 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 62
Query: 142 ARMVA 146
M
Sbjct: 63 GVMTG 67
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 13 MKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAPFDFPRFLDL 70
++EAF L+D +G+G I+ + ++ L + L ++I E + DF F+ +
Sbjct: 5 LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGV 64
Query: 71 MA 72
M
Sbjct: 65 MT 66
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 5 LSDDQVSSMKEAFTLFDTDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAP 61
L+++Q + K AF +F DG I+ ELG +MR LG NPT +L+ +I E E +
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 62 FDFPRFLDLMAKHMK 76
DF FL +M + MK
Sbjct: 72 VDFDEFLVMMVRSMK 86
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 97 GFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMV 145
G +S +L ++ +G+ P E E I EVD G + +++F+ MV
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 5 LSDDQVSSMKEAFTLFDTDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAP 61
L+++Q + K AF +F DG I+ ELG +MR LG NPT +L+ +I E E +
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 62 FDFPRFLDLMAKHMK 76
DF FL +M + MK
Sbjct: 72 VDFDEFLVMMVRSMK 86
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 97 GFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMV 145
G +S +L ++ +G+ P E E I EVD G + +++F+ MV
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 5 LSDDQVSSMKEAFTLFDTDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAP 61
L+++Q + K AF +F DG I+ ELG +MR LG NPT +L+ +I E E +
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 62 FDFPRFLDLMAKHMK 76
DF FL +M + MK
Sbjct: 72 VDFDEFLVMMVRSMK 86
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 97 GFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMV 145
G +S +L ++ +G+ P E E I EVD G + +++F+ MV
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 5 LSDDQVSSMKEAFTLFDTDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAP 61
L+++Q + K AF +F DG I+ ELG +MR LG NPT +L+ +I E E +
Sbjct: 12 LTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 62 FDFPRFLDLMAKHMK 76
DF FL +M + MK
Sbjct: 72 VDFDEFLVMMVRCMK 86
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 97 GFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMV 145
G +S +L ++ +G+ P E E I EVD G + +++F+ MV
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 5 LSDDQVSSMKEAFTLFDTDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAP 61
L+++Q + K AF +F DG I+ ELG +MR LG NPT +L+ +I E E +
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 62 FDFPRFLDLMAKHMK 76
DF +L +MA+ MK
Sbjct: 72 VDFDEWLVMMARCMK 86
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 97 GFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMV 145
G +S +L ++ +G+ P E E I EVD G + +++++ M
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVMMA 82
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 5 LSDDQVSSMKEAFTLFDTDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAP 61
L+++Q + K AF +F DG I+ ELG +MR LG NPT +L+ +I E E +
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 62 FDFPRFLDLMAKHMK 76
DF FL +M + MK
Sbjct: 72 VDFDEFLVMMVRCMK 86
Score = 34.3 bits (77), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 97 GFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMV 145
G +S +L ++ +G+ P E E I EVD G + +++F+ MV
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 49 LKSIISEEKLTAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHIL 108
+ IS K FD+ RF L+ K D Q+++ F++LDKD +GF+ +L+ +L
Sbjct: 11 INKAISAFKDPGTFDYKRFFHLVGLKGKT---DAQVKEVFEILDKDQSGFIEEEELKGVL 67
Query: 109 ---TSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 147
++ G L +E + D DGKI ++F A+MVA+
Sbjct: 68 KGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEF-AKMVAQ 108
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 82 RQLRDAFKVLDKDNTGFVSVSDLRHILTSI-GEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
++LRDAF+ D + G +S S+LR + + G ++ + +E IR+VD+ DG++ +E+F
Sbjct: 7 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
Query: 141 IARMVAK 147
+ RM+++
Sbjct: 67 V-RMMSR 72
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 10 VSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPT-QAQLKSIISEEKLT--APFDFPR 66
V +++AF FDT+GDG+I+ SEL MR L G+ ++ II + L DF
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 67 FLDLMAK 73
F+ +M++
Sbjct: 66 FVRMMSR 72
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 87 AFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARM 144
AF++ D DN+G +++ DLR + +GE L E E I E D D +I ++FI M
Sbjct: 14 AFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIM 71
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 16 AFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE 55
AF LFD D G I +L + + LG N T+ +L+ +I+E
Sbjct: 14 AFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAE 53
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 68 LDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREV 127
L ++AKH+ + LR+ F LD DN+G +S ++ L IG + P + + +R++
Sbjct: 44 LTIIAKHLCDVEIN-NLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDI 102
Query: 128 DVGSDGKIKYEDFIARMVAK 147
D + G+I Y DF+A + K
Sbjct: 103 DSNASGQIHYTDFLAATIDK 122
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 5/151 (3%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTA 60
+ K L D ++++++ F D D G ++ E+ ++ +G + ++ + A
Sbjct: 47 IAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNA 106
Query: 61 PFDFPRFLDLMAKHMKPEPFDRQ--LRDAFKVLDKDNTGFVSVSDLRHILTS--IGEKLE 116
+ D +A + + + ++ FK D D G +SV +L+ I I L
Sbjct: 107 SGQI-HYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLI 165
Query: 117 PSEFDEWIREVDVGSDGKIKYEDFIARMVAK 147
D ++EVD+ DG+I + +F+ M K
Sbjct: 166 DKAIDSLLQEVDLNGDGEIDFHEFMLMMSKK 196
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 5 LSDDQVSSMKEAFTLFDTDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAP 61
L+++Q + K AF +F DG I+ ELG +MR LG NPT +L+ +I E E +
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 62 FDFPRFLDLMAKHMK 76
DF +L +M + MK
Sbjct: 72 VDFDEWLVMMVRCMK 86
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 97 GFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMV 145
G +S +L ++ +G+ P E E I EVD G + +++++ MV
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVMMV 82
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAPF 62
LS++Q +KEAF LFDT+ G I EL + MR+LG + + ++ +++E +
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 63 DFPRFLDLMAKHMK 76
F FLD+M + +K
Sbjct: 61 GFDDFLDIMTEKIK 74
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 37/66 (56%)
Query: 82 RQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFI 141
+++++AF + D + TG + +L+ + ++G ++ E E + E D +G I ++DF+
Sbjct: 7 QEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFL 66
Query: 142 ARMVAK 147
M K
Sbjct: 67 DIMTEK 72
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRF 67
D++ + + F D D G ++ E + + L NP ++ I + DF F
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPLVQRVIDIFDTDG-NGEVDFKEF 60
Query: 68 LDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHIL-TSIGEKLEPSEF----DE 122
++ +++ +++LR AF++ D D G++S +L +L +G L+ ++ D+
Sbjct: 61 IEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDK 120
Query: 123 WIREVDVGSDGKIKYEDFIA 142
I D DG+I +E+F A
Sbjct: 121 TIINADKDGDGRISFEEFCA 140
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRF 67
D++ + + F D D G ++ E + + L NP ++ I + DF F
Sbjct: 4 DEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPLVQRVIDIFDTDG-NGEVDFKEF 61
Query: 68 LDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHIL-TSIGEKLEPSEF----DE 122
++ +++ +++LR AF++ D D G++S +L +L +G L+ ++ D+
Sbjct: 62 IEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDK 121
Query: 123 WIREVDVGSDGKIKYEDFIA 142
I D DG+I +E+F A
Sbjct: 122 TIINADKDGDGRISFEEFCA 141
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRF 67
D++ + + F D D G ++ E + + L NP ++ I + DF F
Sbjct: 17 DEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPLVQRVIDIFDTDG-NGEVDFKEF 74
Query: 68 LDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHIL-TSIGEKLEPSEF----DE 122
++ +++ +++LR AF++ D D G++S +L +L +G L+ ++ D+
Sbjct: 75 IEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDK 134
Query: 123 WIREVDVGSDGKIKYEDFIA 142
I D DG+I +E+F A
Sbjct: 135 TIINADKDGDGRISFEEFCA 154
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRF 67
D++ + + F D D G ++ E + + L NP ++ I + DF F
Sbjct: 18 DEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPLVQRVIDIFDTDG-NGEVDFKEF 75
Query: 68 LDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHIL-TSIGEKLEPSEF----DE 122
++ +++ +++LR AF++ D D G++S +L +L +G L+ ++ D+
Sbjct: 76 IEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDK 135
Query: 123 WIREVDVGSDGKIKYEDFIA 142
I D DG+I +E+F A
Sbjct: 136 TIINADKDGDGRISFEEFCA 155
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 71 MAKHMKPEP---FDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREV 127
M + MK + + +L D F++ DK+ G++ + +L+ +L + GE + + +E +++
Sbjct: 1 MVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG 60
Query: 128 DVGSDGKIKYEDFIARM 144
D +DG+I Y++F+ M
Sbjct: 61 DKNNDGRIDYDEFLEFM 77
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 11 SSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII--SEEKLTAPFDFPRFL 68
+ + F +FD + DG I EL I++++ G T+ ++ ++ ++ D+ FL
Sbjct: 15 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 74
Query: 69 DLM 71
+ M
Sbjct: 75 EFM 77
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 36/155 (23%)
Query: 6 SDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFP 65
+D V +K AF D +G G N T+ QL+ + L P +F
Sbjct: 50 NDYDVQKLKAAFLHLDEEGKG----------------NITKLQLRKGLERSGLMLPPNFD 93
Query: 66 RFLD--------------LMAKHMKPEPFDRQL-RDAFKVLDKDNTGFVSVSDLRHILTS 110
LD +A + ++L AF+V D DN G ++ ++L H+L +
Sbjct: 94 LLLDQIDSDGSGNIDYTEFLAAAIDRRQLSKKLIYCAFRVFDVDNDGEITTAELAHVLFN 153
Query: 111 IGEKLEPSEFD-----EWIREVDVGSDGKIKYEDF 140
++ +E D + IREVD DGKI + +F
Sbjct: 154 GNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEF 188
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 82 RQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFI 141
++L+ AF LD++ G ++ LR L G L P+ FD + ++D G I Y +F+
Sbjct: 55 QKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPN-FDLLLDQIDSDGSGNIDYTEFL 113
Query: 142 ARMV 145
A +
Sbjct: 114 AAAI 117
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 3 KDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTA 60
+ L +++ ++EAF FD D DG I +LG MR++G PT+ +L + + L
Sbjct: 2 RSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGG 61
Query: 61 PFDFPRFLDLMA 72
DF F++LM
Sbjct: 62 HVDFDDFVELMG 73
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 73 KHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSD 132
+ ++PE + +LR+AF+ DKD G+++ DL + + ++G E E +++++
Sbjct: 2 RSLRPEEIE-ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLG 60
Query: 133 GKIKYEDFIARMVAK 147
G + ++DF+ M K
Sbjct: 61 GHVDFDDFVELMGPK 75
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 41/64 (64%)
Query: 81 DRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
+ +L D F++ DK+ G++ + +L+ +L + GE + + +E +++ D +DG+I Y++F
Sbjct: 6 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 65
Query: 141 IARM 144
+ M
Sbjct: 66 LEFM 69
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 11 SSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII--SEEKLTAPFDFPRFL 68
+ + F +FD + DG I EL I++++ G T+ ++ ++ ++ D+ FL
Sbjct: 7 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 66
Query: 69 DLM 71
+ M
Sbjct: 67 EFM 69
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 41/64 (64%)
Query: 81 DRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
+ +L D F++ DK+ G++ + +L+ +L + GE + + +E +++ D +DG+I Y++F
Sbjct: 4 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 63
Query: 141 IARM 144
+ M
Sbjct: 64 LEFM 67
Score = 30.0 bits (66), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 11 SSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII--SEEKLTAPFDFPRFL 68
+ + F +FD + DG I EL I++++ G T+ ++ ++ ++ D+ FL
Sbjct: 5 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 64
Query: 69 DLM 71
+ M
Sbjct: 65 EFM 67
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 41/64 (64%)
Query: 81 DRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
+ +L D F++ DK+ G++ + +L+ +L + GE + + +E +++ D +DG+I Y++F
Sbjct: 5 EEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 64
Query: 141 IARM 144
+ M
Sbjct: 65 LEFM 68
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII--SEEKL 58
MGK S++++S + F +FD + DG I EL I++++ G T+ ++ ++ ++
Sbjct: 1 MGK--SEEELSDL---FRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNN 55
Query: 59 TAPFDFPRFLDLM 71
D+ FL+ M
Sbjct: 56 DGRIDYDEFLEFM 68
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 40/63 (63%)
Query: 82 RQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFI 141
+L D F++ DK+ G++ + +L+ +L + GE + + +E +++ D +DG+I Y++F+
Sbjct: 10 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 69
Query: 142 ARM 144
M
Sbjct: 70 EFM 72
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 11 SSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII--SEEKLTAPFDFPRFL 68
+ + F +FD + DG I EL I++++ G T+ ++ ++ ++ D+ FL
Sbjct: 10 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 69
Query: 69 DLM 71
+ M
Sbjct: 70 EFM 72
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 87 AFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARM 144
AFK+ D D TG +S +L+ + +GE L E E I E D DG++ ++F+ M
Sbjct: 16 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 73
Score = 33.1 bits (74), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 16 AFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE 55
AF LFD D GKI+ L + + LG N T +L+ +I E
Sbjct: 16 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDE 55
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Query: 11 SSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQ-AQLKSIIS--EEKLTAPFDFPRF 67
S + F D D G I+ +EL + + P ++SIIS + + A +F F
Sbjct: 3 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 62
Query: 68 LDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREV 127
+ K++ ++ F+ D+DN+G + ++L+ L+ G +L D IR+
Sbjct: 63 TGVW-KYITD------WQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF 115
Query: 128 DVGSDGKIKYEDFIARMVA 146
D G+I ++DFI +
Sbjct: 116 DRQGRGQIAFDDFIQGCIV 134
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Query: 11 SSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQ-AQLKSIIS--EEKLTAPFDFPRF 67
S + F D D G I+ +EL + + P ++SIIS + + A +F F
Sbjct: 25 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 84
Query: 68 LDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREV 127
+ K++ ++ F+ D+DN+G + ++L+ L+ G +L D IR+
Sbjct: 85 TGVW-KYITD------WQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF 137
Query: 128 DVGSDGKIKYEDFIARMVA 146
D G+I ++DFI +
Sbjct: 138 DRQGRGQIAFDDFIQGCIV 156
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 40/64 (62%)
Query: 81 DRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
+ +L + F++ DK+ GF+ + +L IL + GE + + ++ +++ D +DG+I +++F
Sbjct: 9 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 68
Query: 141 IARM 144
+ M
Sbjct: 69 LKMM 72
Score = 32.7 bits (73), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 11 SSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII--SEEKLTAPFDFPRFL 68
+ F +FD + DG I ELG ++R+ G + + ++ ++ S++ DF FL
Sbjct: 10 EELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFL 69
Query: 69 DLM 71
+M
Sbjct: 70 KMM 72
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Query: 11 SSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQ-AQLKSIIS--EEKLTAPFDFPRF 67
S + F D D G I+ +EL + + P ++SIIS + + A +F F
Sbjct: 4 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 63
Query: 68 LDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREV 127
+ K++ ++ F+ D+DN+G + ++L+ L+ G +L D IR+
Sbjct: 64 TGVW-KYITD------WQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF 116
Query: 128 DVGSDGKIKYEDFIARMVA 146
D G+I ++DFI +
Sbjct: 117 DRQGRGQIAFDDFIQGCIV 135
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Query: 11 SSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQ-AQLKSIIS--EEKLTAPFDFPRF 67
S + F D D G I+ +EL + + P ++SIIS + + A +F F
Sbjct: 7 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 66
Query: 68 LDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREV 127
+ K++ ++ F+ D+DN+G + ++L+ L+ G +L D IR+
Sbjct: 67 TGVW-KYITD------WQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF 119
Query: 128 DVGSDGKIKYEDFIARMVA 146
D G+I ++DFI +
Sbjct: 120 DRQGRGQIAFDDFIQGCIV 138
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Query: 11 SSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQ-AQLKSIIS--EEKLTAPFDFPRF 67
S + F D D G I+ +EL + + P ++SIIS + + A +F F
Sbjct: 26 SFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 85
Query: 68 LDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREV 127
+ K++ ++ F+ D+DN+G + ++L+ L+ G +L D IR+
Sbjct: 86 TGVW-KYITD------WQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF 138
Query: 128 DVGSDGKIKYEDFIARMVA 146
D G+I ++DFI +
Sbjct: 139 DRQGRGQIAFDDFIQGCIV 157
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 73 KHMKPEPFDRQ---LRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDV 129
KHM + + L++ FK++D DN+G ++ +L+ L +G +L SE + + D+
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 130 GSDGKIKYEDFIARMV 145
G I Y +FIA V
Sbjct: 71 DKSGTIDYGEFIAATV 86
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL-- 58
M + LS++++ +KE F + DTD G I EL ++ +G ++++K ++ +
Sbjct: 13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK 72
Query: 59 TAPFDFPRFL 68
+ D+ F+
Sbjct: 73 SGTIDYGEFI 82
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Query: 11 SSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQ-AQLKSIIS--EEKLTAPFDFPRF 67
S + F D D G I+ +EL + + P ++SIIS + + A +F F
Sbjct: 7 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 66
Query: 68 LDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREV 127
+ K++ ++ F+ D+DN+G + ++L+ L+ G +L D IR+
Sbjct: 67 TGVW-KYITD------WQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKF 119
Query: 128 DVGSDGKIKYEDFIARMVA 146
D G+I ++DFI +
Sbjct: 120 DRQGRGQIAFDDFIQGCIV 138
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 11/142 (7%)
Query: 2 GKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIIS--EEKLT 59
+ ++D+Q + E F DTDG G I+ EL + S G + A + ++ ++ +
Sbjct: 20 ARHMNDNQ--ELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHS 77
Query: 60 APFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSE 119
F F DL F +R+ F+ D G + +++R L S G ++
Sbjct: 78 GEITFDEFKDL-------HHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQT 130
Query: 120 FDEWIREVDVGSDGKIKYEDFI 141
F +R+ D G + ++D++
Sbjct: 131 FQALMRKFDRQRRGSLGFDDYV 152
Score = 29.3 bits (64), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 10 VSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFLD 69
+ SM+E F D+ GDG++ +E+ + S G ++ ++++ + FD R
Sbjct: 92 ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRK------FDRQRRGS 145
Query: 70 L-MAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVS 102
L +++ F ++R+ F D++ TG V+ +
Sbjct: 146 LGFDDYVELSIFVCRVRNVFAFYDRERTGQVTFT 179
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 14 KEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEE 56
K+ FTLFD G G IA LG +R++G NPT ++ II+ +
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINAD 49
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 5 LSDDQVSSMKEAFTLFDTDG-DGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAP 61
L+++Q + K AF +F DG I+ ELG + R LG NPT +L+ I E E +
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGT 71
Query: 62 FDFPRFL 68
DF FL
Sbjct: 72 VDFDEFL 78
Score = 30.0 bits (66), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 97 GFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMV 145
G +S +L + +G+ P E E I EVD G + +++F+ V
Sbjct: 34 GCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEFLVXXV 82
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 6 SDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQA----QLKSIISEEKLTAP 61
S ++ + + F D +GDG++ EL L G Q++S + A
Sbjct: 58 SQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAAD 117
Query: 62 FDFPRFLDL-----MAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLE 116
FD ++D +A K +L AF+ D+D G +SV +L + + LE
Sbjct: 118 FDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL--DHLE 175
Query: 117 PSEFDEWIREVDVGSDGKIKYEDFIARMVAK 147
+ E I +D +DG + +E+F +M+ K
Sbjct: 176 SKTWKEMISGIDSNNDGDVDFEEF-CKMIQK 205
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELG 34
LS D++ S AF FD DG+GKI+ EL
Sbjct: 140 LSKDKLES---AFQKFDQDGNGKISVDELA 166
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 6 SDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQA----QLKSIISEEKLTAP 61
S ++ + + F D +GDG++ EL L G Q++S + A
Sbjct: 341 SQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAAD 400
Query: 62 FDFPRFLDL-----MAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLE 116
FD ++D +A K +L AF+ D+D G +SV +L + + LE
Sbjct: 401 FDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL--DHLE 458
Query: 117 PSEFDEWIREVDVGSDGKIKYEDFIARMVAK 147
+ E I +D +DG + +E+F +M+ K
Sbjct: 459 SKTWKEMISGIDSNNDGDVDFEEF-CKMIQK 488
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 5 LSDDQVSSMKEAFTLFDTDGDGKIAPSELG 34
LS D++ S AF FD DG+GKI+ EL
Sbjct: 423 LSKDKLES---AFQKFDQDGNGKISVDELA 449
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 16 AFTLFDTDGDGKIAPSELGILMRSLGGNP-TQAQLKSIISE--EKLTAPFDFPRFLDLMA 72
AF +FD +GDG I E +M+ +G P T A+++ + E E D P F+DL+
Sbjct: 13 AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 72
Query: 73 K 73
K
Sbjct: 73 K 73
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 87 AFKVLDKDNTGFVSVSDLRHILTSIGEK-LEPSEFDEWIREVDVGSDGKIKYEDFI 141
AFKV D + G + + + I+ +GE+ L +E +E ++E D +G I +F+
Sbjct: 13 AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 68
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 11 SSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQ-AQLKSIIS--EEKLTAPFDFPRF 67
S + F D D G I+ +EL + + P ++SIIS + + A +F F
Sbjct: 4 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 63
Query: 68 LDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREV 127
+ K++ ++ F+ D+DN+G + ++L+ L+ G +L D IR+
Sbjct: 64 TGVW-KYITD------WQNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKF 114
Query: 128 DVGSDGKIKYEDFIARMVA 146
D G+I ++DFI +
Sbjct: 115 DRQGRGQIAFDDFIQGCIV 133
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILT---SIGEKLEPSEFDEWIREVDVGSDGKIKYED 139
QL++ F++LD D +GF+ +L++ L S L SE ++ D DGKI E+
Sbjct: 42 QLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEE 101
Query: 140 F 140
F
Sbjct: 102 F 102
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 85 RDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARM 144
R F LD D +G V +L+ LT++G +L P + + ++GKI ++D+IA
Sbjct: 106 RQHFISLDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYS--TNGKITFDDYIACC 163
Query: 145 V 145
V
Sbjct: 164 V 164
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 7/91 (7%)
Query: 10 VSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFLD 69
++ ++ F DTD G + P EL + ++G + + SI F ++
Sbjct: 102 LNGWRQHFISLDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIA 161
Query: 70 LMAKHMKPEPFDRQLRDAFKVLDKDNTGFVS 100
K R L D+F+ D G V+
Sbjct: 162 CCVKL-------RALTDSFRRRDTAQQGVVN 185
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFI 141
++ AFK+ DKD +G +S +L + + ++ E + I +VD DG++ + +F+
Sbjct: 418 RMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFV 476
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 13 MKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE--EKLTAPFDFPRFLDL 70
M+ AF +FD DG GKI+ EL L + +L+SII + DF F+++
Sbjct: 419 MERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEM 478
Query: 71 MAKHMKPE 78
+ ++ E
Sbjct: 479 LQNFVRNE 486
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 37.0 bits (84), Expect = 0.004, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 GKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIIS--EEKLT 59
K +S +Q++ + +F FD G + + + S+G N +A+ I+S +
Sbjct: 716 AKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRM 775
Query: 60 APFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHIL 108
F F+D M++ Q+ +FK+L D +++V +LR L
Sbjct: 776 GVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKN-YITVDELRREL 823
Score = 33.9 bits (76), Expect = 0.034, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
+ R +F D+ TG + D R L S+G + +EF + VD G + ++ FI
Sbjct: 726 EFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFID 785
Query: 143 RM 144
M
Sbjct: 786 FM 787
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 15/153 (9%)
Query: 1 MGKDL-SDDQVSSMKEAFTLFDTDGDGKIAPSEL--GI--LMRSLGGNPTQAQLKSIISE 55
MG L S D+ + F D +GDG++ +EL G LMR G + + ++ E
Sbjct: 347 MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHE 406
Query: 56 -EKLTAPFDFPRFLDLMAKHMKPEPFDRQ-------LRDAFKVLDKDNTGFVSVSDLRHI 107
+++ DF + + DR+ L AF++ D DN+G +S ++L I
Sbjct: 407 VDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI 466
Query: 108 LTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
++ + + EVD +DG++ +++F
Sbjct: 467 FGV--SDVDSETWKSVLSEVDKNNDGEVDFDEF 497
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 13 MKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQ-LKSIISE--EKLTAPFDFPRFLD 69
++ AF +FD+D GKI+ +EL + G + ++ KS++SE + DF F
Sbjct: 443 LERAFRMFDSDNSGKISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQ 499
Query: 70 LMAK 73
++ K
Sbjct: 500 MLLK 503
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 9/121 (7%)
Query: 29 APSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFLDLMAKHMKPEPFDRQLRDAF 88
P E + + L NP + ++ + S F FLDL++ D + AF
Sbjct: 76 VPFEQILSLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAF 135
Query: 89 KVLDKDNTGFVSVSDLRHI---LTSIGE--KLEPSE----FDEWIREVDVGSDGKIKYED 139
++ D D+ G ++ DL + LT GE +L SE D + E D+ DG I +
Sbjct: 136 RIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSE 195
Query: 140 F 140
F
Sbjct: 196 F 196
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 15/153 (9%)
Query: 1 MGKDL-SDDQVSSMKEAFTLFDTDGDGKIAPSEL--GI--LMRSLGGNPTQAQLKSIISE 55
MG L S D+ + F D +GDG++ +EL G LMR G + + ++ E
Sbjct: 324 MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHE 383
Query: 56 -EKLTAPFDFPRFLDLMAKHMKPEPFDRQ-------LRDAFKVLDKDNTGFVSVSDLRHI 107
+++ DF + + DR+ L AF++ D DN+G +S ++L I
Sbjct: 384 VDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI 443
Query: 108 LTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
++ + + EVD +DG++ +++F
Sbjct: 444 FGV--SDVDSETWKSVLSEVDKNNDGEVDFDEF 474
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 13 MKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQ-LKSIISE--EKLTAPFDFPRFLD 69
++ AF +FD+D GKI+ +EL + G + ++ KS++SE + DF F
Sbjct: 420 LERAFRMFDSDNSGKISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQ 476
Query: 70 LMAK 73
++ K
Sbjct: 477 MLLK 480
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 15/153 (9%)
Query: 1 MGKDL-SDDQVSSMKEAFTLFDTDGDGKIAPSEL--GI--LMRSLGGNPTQAQLKSIISE 55
MG L S D+ + F D +GDG++ +EL G LMR G + + ++ E
Sbjct: 348 MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHE 407
Query: 56 -EKLTAPFDFPRFLDLMAKHMKPEPFDRQ-------LRDAFKVLDKDNTGFVSVSDLRHI 107
+++ DF + + DR+ L AF++ D DN+G +S ++L I
Sbjct: 408 VDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI 467
Query: 108 LTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
++ + + EVD +DG++ +++F
Sbjct: 468 FGV--SDVDSETWKSVLSEVDKNNDGEVDFDEF 498
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 13 MKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQ-LKSIISE--EKLTAPFDFPRFLD 69
++ AF +FD+D GKI+ +EL + G + ++ KS++SE + DF F
Sbjct: 444 LERAFRMFDSDNSGKISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQ 500
Query: 70 LMAK 73
++ K
Sbjct: 501 MLLK 504
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 85 RDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARM 144
R F D D +G V +L+ LT++G +L P + + ++GKI ++D+IA
Sbjct: 106 RQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYS--TNGKITFDDYIACC 163
Query: 145 V 145
V
Sbjct: 164 V 164
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 7/91 (7%)
Query: 10 VSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFLD 69
++ ++ F FDTD G + P EL + ++G + + SI F ++
Sbjct: 102 LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIA 161
Query: 70 LMAKHMKPEPFDRQLRDAFKVLDKDNTGFVS 100
K R L D+F+ D G V+
Sbjct: 162 CCVKL-------RALTDSFRRRDTAQQGVVN 185
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 9/121 (7%)
Query: 29 APSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFLDLMAKHMKPEPFDRQLRDAF 88
P E + + L NP + ++ + S F FLDL++ D + AF
Sbjct: 45 VPFEQILSLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAF 104
Query: 89 KVLDKDNTGFVSVSDLRHI---LTSIGE--KLEPSE----FDEWIREVDVGSDGKIKYED 139
++ D D+ G ++ DL + LT GE +L SE D + E D+ DG I +
Sbjct: 105 RIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSE 164
Query: 140 F 140
F
Sbjct: 165 F 165
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 10 VSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE 55
++ + F FDT+GDGKI+ SELG +++L G+ T +++ +++E
Sbjct: 10 IADRERIFKRFDTNGDGKISSSELGDALKTL-GSVTPDEVRRMMAE 54
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 88 FKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
FK D + G +S S+L L ++G + P E + E+D DG I +++F
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEF 68
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 49 LKSIISEEKLTAPFDFPRFLDLMA-KHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHI 107
+K + K F+ +F L+ K M ++ FK +D D +GF+ +L+ +
Sbjct: 12 IKKALDAVKAEGSFNHKKFFALVGLKAMSA----NDVKKVFKAIDADASGFIEEEELKFV 67
Query: 108 LTSI---GEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
L S G L +E +++ D DGKI ++F
Sbjct: 68 LKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEF 103
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 86 DAFKV----LDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFI 141
+AFKV D + G + + L+ +L +G E IREV GS+ Y DF+
Sbjct: 48 EAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFL 107
Query: 142 ARMVAK 147
M+ K
Sbjct: 108 RMMLGK 113
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 6 SDDQVSSMKEAFTL----FDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTA- 60
+D+ + S EAF + FD +G+G I L ++ LG T +LK +I E +
Sbjct: 39 NDEDLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSE 98
Query: 61 -PFDFPRFLDLM 71
F + FL +M
Sbjct: 99 ETFSYSDFLRMM 110
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 64 FPRFLDLMA--KHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIG-----EKLE 116
F FL+ +A + E +++L+ FK+ D D G + ++L + ++ + L
Sbjct: 73 FVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLS 132
Query: 117 PSEFDEWI-REVDVGSDGKIKYEDFIARMV 145
P EF + ++D+ +DG++ E+FI M
Sbjct: 133 PEEFINLVFHKIDINNDGELTLEEFINGMA 162
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 49 LKSIISEEKLTAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHIL 108
++S +S + F++ F + K Q++ F +LD+D +GF+ +L+ L
Sbjct: 12 IESALSSCQAADSFNYKSFFSTVGLSSKTPD---QIKKVFGILDQDKSGFIEEEELQLFL 68
Query: 109 ---TSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
+S L +E ++ D DGKI E+F
Sbjct: 69 KNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEF 103
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 85 RDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARM 144
R F D D +G V +L+ LT++G +L P + + + GKI ++D+IA
Sbjct: 75 RQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYS--TSGKITFDDYIACC 132
Query: 145 V 145
V
Sbjct: 133 V 133
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 10 VSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFLD 69
++ ++ F FD+D G + P EL + ++G + SI + F ++
Sbjct: 71 LNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSGKITFDDYIA 130
Query: 70 LMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVS 102
K R L D+F+ D G V+ S
Sbjct: 131 CCVKL-------RALTDSFRRRDSAQQGMVNFS 156
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 49 LKSIISEEKLTAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHIL 108
++S +S + F++ F + K Q++ F +LD+D +GF+ +L+ L
Sbjct: 11 IESALSSCQAADSFNYKSFFSTVGLSSKTPD---QIKKVFGILDQDKSGFIEEEELQLFL 67
Query: 109 ---TSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
+S L +E ++ D DGKI E+F
Sbjct: 68 KNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEF 102
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII---SEEKLTAPFDF 64
+ + + + FDTD G I SEL + G + + II S+E + DF
Sbjct: 85 NNIKRWQAIYKQFDTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYSDE--SGNMDF 142
Query: 65 PRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVS 102
F+ + + D R AFK LDKD TG + V+
Sbjct: 143 DNFISCLVR------LDAMFR-AFKSLDKDGTGQIQVN 173
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 34.3 bits (77), Expect = 0.027, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 82 RQLRDAFKVLDKDNTGFVSVSDL-------RHILTSIGE-KLEPSEFDEWIREVDVGSDG 133
++L D FK LDK+ G + +L R+ +GE K E D ++EVD +G
Sbjct: 355 KELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNG 414
Query: 134 KIKYEDFIA 142
I+Y +FI+
Sbjct: 415 YIEYSEFIS 423
Score = 28.9 bits (63), Expect = 1.2, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 13 MKEAFTLFDTDGDGKIAPSELGIL 36
++ AF LFDTD GKI EL L
Sbjct: 437 LRRAFNLFDTDKSGKITKEELANL 460
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 59/149 (39%), Gaps = 24/149 (16%)
Query: 10 VSSMKEAFTLFDTDGDGKIAPSEL-----GILMRSLGGNPTQAQLKSIISEE-------K 57
+ K F D + +G+I+ E+ I++ +LG P QA+ E K
Sbjct: 15 IGRHKHMFNFLDVNHNGRISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMK 74
Query: 58 LTAPFDFPRFLDLMAKHMKPEPFDRQLRDA-----------FKVLDKDNTGFVSVSDLRH 106
++P +++ K + E R ++ F ++DKD G +S+ + +
Sbjct: 75 YGVETEWPEYIEGW-KRLASEELKRYSKNQITLIRLWGDALFDIIDKDQNGAISLDEWKA 133
Query: 107 ILTSIGEKLEPSEFDEWIREVDVGSDGKI 135
S G + +E R D+ G++
Sbjct: 134 YTKSAGIIQSSEDCEETFRVCDIDESGQL 162
>pdb|1WLZ|A Chain A, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|B Chain B, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|C Chain C, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|D Chain D, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
Length = 105
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 88 FKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIAR 143
F+ D T +S + R I + L +FD E+ V + G++KY DF++R
Sbjct: 30 FENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSR 85
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 26 GKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFLDLMAKHMKPEPFDRQLR 85
GKI+ R LG P+ K I +E + ++L+ ++ + + +L
Sbjct: 30 GKISIDNASYNARKLGLAPSSIDEKKI--KELYGDNLTYEQYLEYLSICVHDKDNVEELI 87
Query: 86 DAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSE 119
F D + TG+++ S +++ILT+ G+ L E
Sbjct: 88 KMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQE 121
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 33.5 bits (75), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 13 MKEAFTLFDTDGDGKIAPSELGILMRSLG 41
M+ F FDT+GDGKI+ SEL +R+LG
Sbjct: 4 MERIFKRFDTNGDGKISLSELTDALRTLG 32
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 88 FKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
FK D + G +S+S+L L ++G E + E+D DG I + +FI+
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTLGST-SADEVQRMMAEIDTDGDGFIDFNEFIS 61
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 33.5 bits (75), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 13 MKEAFTLFDTDGDGKIAPSELGILMRSLG 41
M+ F FDT+GDGKI+ SEL +R+LG
Sbjct: 5 MERIFKRFDTNGDGKISLSELTDALRTLG 33
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 88 FKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIA 142
FK D + G +S+S+L L ++G E + E+D DG I + +FI+
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTLGST-SADEVQRMMAEIDTDGDGFIDFNEFIS 62
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 33.1 bits (74), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 82 RQLRDAFKVL--DKDNTGFVSVSDLRHILTSIGEKLEP--SEFDEWIREVDVGSDGKIKY 137
+++ AF+V + + +S +L+ ++ ++G L S DE I EVD DG++ +
Sbjct: 5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSF 64
Query: 138 EDFIARM 144
E+F+ M
Sbjct: 65 EEFLVMM 71
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 33.1 bits (74), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 61 PFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHIL---TSIGEKLEP 117
FD +F ++ +K + D ++ F +LDKD +GF+ +L IL +S L
Sbjct: 23 SFDHKKFFQMVG--LKKKSAD-DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSA 79
Query: 118 SEFDEWIREVDVGSDGKIKYEDF 140
E + D DGKI E+F
Sbjct: 80 KETKTLMAAGDKDGDGKIGVEEF 102
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 33.1 bits (74), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 61 PFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHIL---TSIGEKLEP 117
FD +F ++ +K + D ++ F +LDKD +GF+ +L IL +S L
Sbjct: 23 SFDHKKFFQMVG--LKKKSAD-DVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSA 79
Query: 118 SEFDEWIREVDVGSDGKIKYEDF 140
E + D DGKI E+F
Sbjct: 80 KETKTLMAAGDKDGDGKIGVEEF 102
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 33.1 bits (74), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 82 RQLRDAFKVLDKDNTGFVSVSDLRHILT---SIGEKLEPSEFDEWIREVDVGSDGKIKYE 138
Q++D F+ +D D +G++ +L+ L S +L SE + D DGKI E
Sbjct: 42 NQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAE 101
Query: 139 DF 140
+F
Sbjct: 102 EF 103
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 33.1 bits (74), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 17 FTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE 55
F FD +GDGKI+ +ELG +++L G+ T ++K +++E
Sbjct: 15 FKRFDANGDGKISAAELGEALKTL-GSITPDEVKHMMAE 52
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 78 EPFDRQLRDA-FKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIK 136
P D+ R+ FK D + G +S ++L L ++G + P E + E+D DG I
Sbjct: 4 HPQDKAERERIFKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFIS 62
Query: 137 YEDF 140
+++F
Sbjct: 63 FQEF 66
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 32.7 bits (73), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII---SEEKLTAPFDF 64
+ + + + FDTD G I +EL + G + Q II S+E T DF
Sbjct: 85 NNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSDE--TGNMDF 142
Query: 65 PRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVS 102
F+ + + D R AF+ LDK+ TG + V+
Sbjct: 143 DNFISCLVR------LDAMFR-AFRSLDKNGTGQIQVN 173
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII---SEEKLTAPFDF 64
+ + + + FDTD G I +EL + G + Q II S+E T DF
Sbjct: 85 NNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSDE--TGNMDF 142
Query: 65 PRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVS 102
F+ + + D R AF+ LDK+ TG + V+
Sbjct: 143 DNFISCLVR------LDAMFR-AFRSLDKNGTGQIQVN 173
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 32.7 bits (73), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII---SEEKLTAPFDF 64
+ + + + FDTD G I +EL + G + Q II S+E T DF
Sbjct: 74 NNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSDE--TGNMDF 131
Query: 65 PRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVS 102
F+ + + D R AF+ LDK+ TG + V+
Sbjct: 132 DNFISCLVR------LDAMFR-AFRSLDKNGTGQIQVN 162
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 32.7 bits (73), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 56 EKLTAPFDFPR--FLDLMA-----KHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHIL 108
E++ FDF + ++D M + D++LR FK+ D D G + +L +I+
Sbjct: 55 EQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNII 114
Query: 109 TSI------GEKLEPSEFDEWI-REVDVGSDGKIKYEDFI 141
+I E + EF + ++D+ DG++ E+F+
Sbjct: 115 KAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFM 154
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 32.7 bits (73), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 2 GKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQL 49
G+DLSDD++ +K + L D DGDGK+ E+ + G Q+
Sbjct: 67 GQDLSDDKIG-LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQV 113
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 32.7 bits (73), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 2 GKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQL 49
G+DLSDD++ +K + L D DGDGK+ E+ + G Q+
Sbjct: 67 GQDLSDDKIG-LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQV 113
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 32.3 bits (72), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 9 QVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTA--PFDFPR 66
++ KE + FD +G+G I L ++ LG T +LK +I E + F +P
Sbjct: 30 KLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPD 89
Query: 67 FLDLM 71
FL +M
Sbjct: 90 FLRMM 94
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 32.3 bits (72), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 85 RDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARM 144
++ F +D+D +G V +LR + +G +L P ++ +G+I ++D++A
Sbjct: 73 KENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYS--KNGRIFFDDYVACC 130
Query: 145 V 145
V
Sbjct: 131 V 131
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 85 RDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARM 144
++ F +D+D +G V +LR + +G +L P ++ +G+I ++D++A
Sbjct: 73 KENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYS--KNGRIFFDDYVACC 130
Query: 145 V 145
V
Sbjct: 131 V 131
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 1 MGKDLS--DDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL 58
M +LS ++ + + E F DT+ +G ++ E+ ++ S+G + + I+ +
Sbjct: 27 MAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVG--IKKWDINRILQALDI 84
Query: 59 TAPFDFPRFLDLMAKHMKPEPFDRQ-LRDAFKVLDKDNTGFVSVSDL 104
+ + + MA + + + L+ AF +DKD G++S SD+
Sbjct: 85 NDRGNIT-YTEFMAGCYRWKNIESTFLKAAFNKIDKDEDGYISKSDI 130
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 1 MGKDLSD-DQVSSMKEAFTLFDTDGDGKIAPSEL--GI--LMRSLGGNPTQAQLKSIISE 55
MG L+ ++ + + F D +GDG++ EL G LM+ G + I +E
Sbjct: 29 MGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAE 88
Query: 56 -EKLTAPFDFPRFLDLMAKHMKPEPFDRQL---RD----AFKVLDKDNTGFVSVSDLRHI 107
+ + DF R + D+QL R+ AF+ D D +G ++ +L +
Sbjct: 89 VDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRL 148
Query: 108 LTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARM 144
+++ + + ++E D +DG++ +E+F+ M
Sbjct: 149 FGVT--EVDDETWHQVLQECDKNNDGEVDFEEFVEMM 183
Score = 29.3 bits (64), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 16 AFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEE---KLTAPFDFPRFLDLMA 72
AF FD+DG GKI ELG R G + + +E DF F+++M
Sbjct: 128 AFQQFDSDGSGKITNEELG---RLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQ 184
Query: 73 K 73
K
Sbjct: 185 K 185
>pdb|2AUC|A Chain A, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|B Chain B, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|C Chain C, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
Length = 126
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 24 GDGKIAPSELGILMRSLGGNPTQAQLKSI--ISEEKLTAPFDFPRFLDLMAKHMKPEPFD 81
+GK+ + R LG P+ K I + + LT + ++L+ + +
Sbjct: 9 SNGKLRIEDASHNARKLGLAPSSTDEKKIRDLYGDSLT----YEQYLEYLTXCVHDRDNX 64
Query: 82 RQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFI 141
+L F D +++GF++ + ++ILT+ G+ L E ++ + S+ +I Y+ F
Sbjct: 65 EELIKXFSHFDNNSSGFLTKNQXKNILTTWGDALTEQEANDALNA--FSSEDRINYKLFC 122
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 61 PFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHIL---TSIGEKLEP 117
FD +F ++ +K + D ++ F +LDKD GF+ +L IL +S L
Sbjct: 23 SFDHKKFFQMVG--LKKKSAD-DVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSA 79
Query: 118 SEFDEWIREVDVGSDGKIKYEDF 140
E + D DGKI E+F
Sbjct: 80 KETKTLMAAGDKDGDGKIGVEEF 102
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 61 PFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHIL---TSIGEKLEP 117
FD +F ++ +K + D ++ F +LDKD +GF+ +L IL +S L
Sbjct: 23 SFDHKKFFQMVG--LKKKSAD-DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSA 79
Query: 118 SEFDEWIREVDVGSDGKIKYEDF 140
E + D GKI+ E+F
Sbjct: 80 KETKTLMAAGDKDGSGKIEVEEF 102
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDLRHIL---TSIGEKLEPSEFDEWIREVDVGSDGKIKYED 139
Q++D F+ +D D +G++ +L++ L S +L SE + D DGKI ++
Sbjct: 42 QVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADE 101
Query: 140 F 140
F
Sbjct: 102 F 102
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 9 QVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTA--PFDFPR 66
++ KE + FD +G+G I L ++ LG T +LK +I E + F +P
Sbjct: 49 KLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPD 108
Query: 67 FLDLM 71
FL +M
Sbjct: 109 FLRMM 113
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 6 SDDQVSSMKEAFTLFDTDGDGKIAPSEL--GI--LMRSLGGNPTQAQLKSIISE-EKLTA 60
S D+ + F D +GDG++ +EL G L R G + + ++ E +++
Sbjct: 330 SQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLD 389
Query: 61 PFDFPRFLDLMAKHMKPEPFDRQ-------LRDAFKVLDKDNTGFVSVSDLRHILTSIGE 113
DF + + DR+ L AF+ D DN+G +S ++L I
Sbjct: 390 AVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIFGV--S 447
Query: 114 KLEPSEFDEWIREVDVGSDGKIKYEDF 140
++ + + EVD +DG++ +++F
Sbjct: 448 DVDSETWKSVLSEVDKNNDGEVDFDEF 474
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 12/73 (16%)
Query: 81 DRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLE-----------PSEFDEWI-REVD 128
+++L+ AF + D D G++S +++ I+ +I + + P + E I R++D
Sbjct: 98 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMD 157
Query: 129 VGSDGKIKYEDFI 141
DGK+ E+FI
Sbjct: 158 TNRDGKLSLEEFI 170
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII---SEEKLTAPFDF 64
+ + + + F+TD G I +EL + G + Q II S+E T DF
Sbjct: 801 NNIKKWQGIYKRFETDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSDE--TGNMDF 858
Query: 65 PRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVS 102
F+ + + D R AF+ LDK+ TG + V+
Sbjct: 859 DNFISCLVR------LDAMFR-AFRSLDKNGTGQIQVN 889
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 45/119 (37%), Gaps = 23/119 (19%)
Query: 17 FTLFDTDGDGKIAPS-----------ELGILMRS------LGGNPTQAQLKSIISEEKLT 59
FT FD DG+G I S E G+ RS GG Q + I++
Sbjct: 10 FTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGD 69
Query: 60 APFDFPRFLDLMAKHM--KPEPFDRQLR----DAFKVLDKDNTGFVSVSDLRHILTSIG 112
F+ K + KP+ F R A V D D G V+V+D LT+ G
Sbjct: 70 QRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG 128
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 11/77 (14%)
Query: 71 MAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIG--EKLEPSEFDE----WI 124
MA +K E L AFK LD + G+V+ +L+ + ++ + L + E I
Sbjct: 1 MACKVKAE-----LEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLI 55
Query: 125 REVDVGSDGKIKYEDFI 141
+ D SDGKI E+F+
Sbjct: 56 KMADKNSDGKISKEEFL 72
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 12/98 (12%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII---SEEKLTAPFDF 64
+ + + + FD D G I SEL + G + + II S+E DF
Sbjct: 74 NNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYSDEG--GNMDF 131
Query: 65 PRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVS 102
F+ + + D R AFK LDKD TG + V+
Sbjct: 132 DNFISCLVR------LDAMFR-AFKSLDKDGTGQIQVN 162
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 84 LRDAFKVLDKDNTGFVSVSDLRHILTSI---GEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
++ AF ++D+D +GF+ +L+ L + L E +++ D DGKI ++F
Sbjct: 44 VKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDEF 103
Query: 141 IARMVA 146
A + A
Sbjct: 104 TALVKA 109
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 77 PEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIK 136
PE F L F V DKDN GF+ + +L++ + D+ DG I
Sbjct: 61 PEDFANHL---FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYIT 117
Query: 137 YEDFIA 142
+++ +
Sbjct: 118 FDEMLT 123
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 18/115 (15%)
Query: 17 FTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLK------------SIISEEKLTAPFDF 64
FT+FD D +G I E ++ + + +L I +E LT
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASV 128
Query: 65 PRFLDLMAKHMKPEPF-DRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPS 118
+ + M + E + +++ FK++DK+ G++++ + R G K++PS
Sbjct: 129 YKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFRE-----GSKVDPS 178
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 1 MGKDLSD-DQVSSMKEAFTLFDTDGDGKIAPSEL--GI--LMRSLGGNPTQAQLKSIISE 55
MG L+ ++ + + F D +GDG++ EL G LM+ G + I +E
Sbjct: 303 MGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAE 362
Query: 56 -EKLTAPFDFPRFLDLMAKHMKPEPFDRQL---RD----AFKVLDKDNTGFVSVSDLRHI 107
+ + DF R + D+QL R+ AF+ D D +G ++ +L +
Sbjct: 363 VDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRL 422
Query: 108 LTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARM 144
+++ + + ++E D +DG++ +E+F+ M
Sbjct: 423 FGVT--EVDDETWHQVLQECDKNNDGEVDFEEFVEMM 457
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 84 LRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIAR 143
++ + D +N G + + L+ ++ +G E + I EV G I Y DF+
Sbjct: 52 FKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNM 111
Query: 144 MVAK 147
M+ K
Sbjct: 112 MLGK 115
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE 55
+++++ KE + FD + +G+I L +M LG T ++K +ISE
Sbjct: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISE 94
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 42 GNPTQ-AQLKSIISEEKLTAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVS 100
G+PT+ A + +E +F F+ ++ + D +LR AFK+ D DN G+++
Sbjct: 59 GDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRG-TLDEKLRWAFKLYDLDNDGYIT 117
Query: 101 VSDLRHILTSI----GEKLE-PSE-------FDEWIREVDVGSDGKIKYEDF 140
+++ I+ +I G +E P E D +D +DGK+ ++F
Sbjct: 118 RNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEF 169
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 3 KDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLG 41
+DLSD++V +K + L D DGDGK+ E+ + G
Sbjct: 68 QDLSDEKVG-LKILYKLMDADGDGKLTKEEVTTFFKKFG 105
Score = 26.2 bits (56), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 9/135 (6%)
Query: 13 MKEA-FTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLD 69
M EA F D +GDG ++ E+ + S + L+ I + D F
Sbjct: 1 MAEALFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTK 60
Query: 70 LMAKHMKPEPFDRQ--LRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREV 127
A + + D + L+ +K++D D G ++ + +T+ +K + + I +
Sbjct: 61 FAAAVKEQDLSDEKVGLKILYKLMDADGDGKLT----KEEVTTFFKKFGYEKVVDQIMKA 116
Query: 128 DVGSDGKIKYEDFIA 142
D DG I E+F+A
Sbjct: 117 DANGDGYITLEEFLA 131
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 84 LRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIAR 143
++ + D +N G + + L+ ++ +G E + I EV G I Y DF+
Sbjct: 52 FKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNM 111
Query: 144 MVAK 147
M+ K
Sbjct: 112 MLGK 115
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 8 DQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISE 55
+++++ KE + FD + +G+I L +M LG T ++K +ISE
Sbjct: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISE 94
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 46/120 (38%), Gaps = 25/120 (20%)
Query: 17 FTLFDTDGDGKIAPS-----------ELGILMRS------LGGNPTQAQLKSIISEEKLT 59
FT FD DG+G I S E G+ RS GG Q + I++
Sbjct: 10 FTTFDQDGNGHIDRSDFSGAAKALLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGD 69
Query: 60 APFDFPRFLDLMAKHMKPEPFDRQ-------LRDAFKVLDKDNTGFVSVSDLRHILTSIG 112
F+ K ++ +P DR L A V D D G V+V+D LT+ G
Sbjct: 70 QRITREEFVTGAVKRLRDKP-DRFAEIARPFLHAALGVADTDGDGAVTVADTARALTAFG 128
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Query: 44 PTQAQLKSIISEEKLTAPFD--FPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSV 101
PT+ KS++ E T + + L +MA+ M E F +L F +L ++
Sbjct: 3 PTE---KSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITA 59
Query: 102 SDLRHILTSIG-EKLEPSEFDEWIREVDVGSDGKIKYEDFIARMV 145
LR +G E + + +RE D+ DG + +F MV
Sbjct: 60 ESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMV 104
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 11 SSMKEAFTLFDTDGDGKIAPSE-LGILMRSLGGNPTQAQLKSI 52
+ + AF L+D D DGKI+ E L +L +G T+ QL++I
Sbjct: 114 NKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENI 156
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 84 LRDAFKVLDKDNTGFVSVSDLRHIL---TSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
++ F +LDKD +GF+ +L IL +S L E + D DGKI E+F
Sbjct: 7 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 66
>pdb|2JBW|A Chain A, Crystal Structure Of The 2,6-Dihydroxy-Pseudo-Oxynicotine
Hydrolase.
pdb|2JBW|B Chain B, Crystal Structure Of The 2,6-Dihydroxy-Pseudo-Oxynicotine
Hydrolase.
pdb|2JBW|C Chain C, Crystal Structure Of The 2,6-Dihydroxy-Pseudo-Oxynicotine
Hydrolase.
pdb|2JBW|D Chain D, Crystal Structure Of The 2,6-Dihydroxy-Pseudo-Oxynicotine
Hydrolase
Length = 386
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 33 LGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFLDL 70
+G+L RSLGGN LKS E +L A + F DL
Sbjct: 225 IGVLGRSLGGN---YALKSAACEPRLAACISWGGFSDL 259
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 30.0 bits (66), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 71/151 (47%), Gaps = 34/151 (22%)
Query: 5 LSDDQVSSMKEAF-TLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFD 63
++D++V +K++F + +D DG++ EL I+ +E+
Sbjct: 50 ITDERVQQIKKSFXSAYDATFDGRLQIEELA---------------NXILPQEE------ 88
Query: 64 FPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSI----GEKLEPSE 119
FL L+ + P + ++ D D++G++S ++L++ L + +K+ P++
Sbjct: 89 --NFL-LIFRREAPLDNSVEFXKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNK 145
Query: 120 FDEWI----REVDVGSDGKIKYEDFIARMVA 146
DE+ + D DG++ D +AR++A
Sbjct: 146 LDEYTDAXXKIFDKNKDGRLDLND-LARILA 175
>pdb|1MR8|A Chain A, Migration Inhibitory Factor-Related Protein 8 From Human
pdb|1MR8|B Chain B, Migration Inhibitory Factor-Related Protein 8 From Human
Length = 93
Score = 29.6 bits (65), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 91 LDKDNTGFVSVSDLRHIL-TSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMV 145
L K N V DL+ +L T + + D W +E+D+ +DG + +++F+ ++
Sbjct: 21 LIKGNFHAVYRDDLKKLLETECPQYIRKKGADVWFKELDINTDGAVNFQEFLILVI 76
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 6/95 (6%)
Query: 49 LKSIISEEKLTAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHIL 108
+K + T FD +F ++ +K + D ++ F +LDKD +GF+ +L IL
Sbjct: 12 IKKAVGAFSATDSFDHKKFFQMVG--LKKKSAD-DVKKVFHMLDKDKSGFIEEDELGFIL 68
Query: 109 TSI---GEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
L E + D DGKI ++F
Sbjct: 69 KGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEF 103
>pdb|1ALC|A Chain A, Refined Structure Of Baboon Alpha-Lactalbumin At 1.7
Angstroms Resolution. Comparison With C-Type Lysozyme
Length = 123
Score = 28.9 bits (63), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 12/125 (9%)
Query: 9 QVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFL 68
Q + + + L+D DG G+IA EL M G TQA I E + + +
Sbjct: 2 QFTKCELSQNLYDIDGYGRIALPELICTMFHTSGYDTQA-----IVENDESTEYGLFQIS 56
Query: 69 DLMAKHMKPEPFDRQLRD--AFKVLDKDNTGFVSVS----DLRHILTSIGEK-LEPSEFD 121
+ + P R + D K LD D T + + D++ I I K L + +
Sbjct: 57 NALWCKSSQSPQSRNICDITCDKFLDDDITDDIMCAKKILDIKGIDYWIAHKALCTEKLE 116
Query: 122 EWIRE 126
+W+ E
Sbjct: 117 QWLCE 121
>pdb|1YFU|A Chain A, Crystal Structure Of
3-Hydroxyanthranilate-3,4-Dioxygenase From Ralstonia
Metallidurans
pdb|1YFW|A Chain A, Crystal Structure Of
3-Hydroxyanthranilate-3,4-Dioxygenase From Ralstonia
Metallidurans Complexed With
4-Chloro-3-Hydroxyanthranilic Acid And O2
pdb|1YFX|A Chain A, Crystal Structure Of
3-Hydroxyanthranilate-3,4-Dioxygenase From Ralstonia
Metallidurans Complexed With
4-Chloro-3-Hydroxyanthranilic Acid And No
pdb|1YFY|A Chain A, Crystal Structure Of
3-Hydroxyanthranilate-3,4-Dioxygenase From Ralstonia
Metallidurans Complexed With 3-Hydroxyanthranilic Acid
Length = 174
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 60 APFDFPRFLDLMAKHMKPEPFDRQL 84
APF+FPR++D A +KP +RQ+
Sbjct: 6 APFNFPRWIDEHAHLLKPPVGNRQV 30
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 84 LRDAFKVLDKDNTGFVSVSDLRHILTSI---GEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
++ AF V+D+D +GF+ +L+ L + L +E ++ + D DG I ++F
Sbjct: 43 VKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEF 102
Query: 141 IARMVA 146
A + A
Sbjct: 103 AAMIKA 108
>pdb|2HG7|A Chain A, Solution Nmr Structure Of Phage-Like Element Pbsx
Protein Xkdw, Northeast Structural Genomics Consortium
Target Sr355
Length = 110
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 44 PTQAQLKSIISEEKLTAPFDFPRFLDLMAKHMKPEPFDR-QLRDAFKVL 91
PTQA+L++ E + P++ P ++L+A+ + E R QL + K L
Sbjct: 41 PTQAELETWWEELQKNPPYEPPDQVELLAQELSQEKLARKQLEELNKTL 89
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 84 LRDAFKVLDKDNTGFVSVSDLRHILTSI---GEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
++ AF ++D+D +GF+ +L+ L + L E +++ D DGKI +++
Sbjct: 43 VKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDEW 102
Query: 141 IARMVA 146
A + A
Sbjct: 103 TALVKA 108
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 31/132 (23%)
Query: 19 LFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFLDLMAKHMKPE 78
LFD++ DGK+ +E+ L+ P Q L M +
Sbjct: 155 LFDSNNDGKLELTEMARLL------PVQENF-----------------LLKFQGIKMCGK 191
Query: 79 PFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEK----LEPSEFDEWIREVDVGSDGK 134
F++ AF++ D+D G++ ++L +L + EK L+ + + + + SDG
Sbjct: 192 EFNK----AFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGG 247
Query: 135 IKYEDFIARMVA 146
Y +A +++
Sbjct: 248 KLYRTDLALILS 259
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 16 AFTLFDTDGDGKIAPSELGILMRSLGGNPTQ 46
AF L+D DG+G I +EL L++ L Q
Sbjct: 196 AFELYDQDGNGYIDENELDALLKDLCEKNKQ 226
>pdb|1XK4|A Chain A, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|B Chain B, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|E Chain E, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|F Chain F, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|I Chain I, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|J Chain J, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|4GGF|A Chain A, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|K Chain K, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|S Chain S, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|U Chain U, Crystal Structure Of Mn2+ Bound Calprotectin
Length = 93
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 91 LDKDNTGFVSVSDLRHIL-TSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMV 145
L K N V DL+ +L T + + D W +E+D+ +DG + +++F+ ++
Sbjct: 21 LIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVI 76
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 84 LRDAFKVLDKDNTGFVSVSDLR---HILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
++ AF +D+D +GF+ +L+ + + L +E +++ D DG I E++
Sbjct: 44 IKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEEW 103
Query: 141 IARMVA 146
+A + A
Sbjct: 104 VALVKA 109
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 84 LRDAFKVLDKDNTGFVSVSDLR---HILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
++ AF +D+D +GF+ +L+ + + L +E +++ D DG I E++
Sbjct: 43 IKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEEW 102
Query: 141 IARMVA 146
+A + A
Sbjct: 103 VALVKA 108
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/54 (22%), Positives = 27/54 (50%)
Query: 88 FKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFI 141
+ +D D G+VS+ + + L ++G L + +D +G+I ++F+
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFL 161
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 13 MKEAFTLFDTDGDGKIAPSELGILMRSL 40
+K AF L+D + DG I E+ +M+S+
Sbjct: 11 LKWAFNLYDINKDGYITKEEMLAIMKSI 38
>pdb|4GXT|A Chain A, The Crystal Structure Of A Conserved Functionally Unknown
Protein From Anaerococcus Prevotii Dsm 20548
Length = 385
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 42 GNPTQAQLKSIISEEKLTAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNT---GF 98
N + +K + EE + + L+AKH K F V D DNT G
Sbjct: 1 SNAXKTYIKRLNWEESIYLAIN-----KLIAKHGKDNEAYNPDNKPFAVFDWDNTSIIGD 55
Query: 99 VSVSDLRHILTSIGEKLEPSEFDEWIRE 126
V + L + + ++ K +P EF E IR+
Sbjct: 56 VEEALLYYXVRNVSFKXDPEEFYELIRK 83
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 88 FKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARM 144
+ +D D G+VS+ + + L ++G L + +D +G+I ++F+ +
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTV 164
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 84 LRDAFKVLDKDNTGFVSVSDLR---HILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 140
++ AF V+D+D +GF+ +L+ + ++ L +E +++ D DG I +++
Sbjct: 44 IKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEW 103
Query: 141 IARMVA 146
A + A
Sbjct: 104 AALVKA 109
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 57 KLTAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTS------ 110
K +F F+ + P +++ AFK+ D TGF+ +L+ ++ +
Sbjct: 86 KRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESE 145
Query: 111 --IGEKLEPSEFDEWIREVDVGSDGKI---KYEDFIA 142
+ E + D+ + D +DGKI +++DF++
Sbjct: 146 LVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVS 182
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 26.9 bits (58), Expect = 4.0, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 81 DRQLRDAFKVLDKDNTGFVSVSDLRHILTSIG 112
+ +L +AF++ DK+ G++ + +L IL + G
Sbjct: 4 EEELANAFRIFDKNADGYIDIEELGEILRATG 35
Score = 26.6 bits (57), Expect = 5.7, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 13 MKEAFTLFDTDGDGKIAPSELGILMRSLG 41
+ AF +FD + DG I ELG ++R+ G
Sbjct: 7 LANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 10/92 (10%)
Query: 32 ELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFLDLMAKHMKPEP-------FDRQL 84
E+ + +++L T Q + +SE + FD P + L K +P +
Sbjct: 36 EICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGS 95
Query: 85 RDAFKVLDKDNTGFVSVSDLRHILTSIGEKLE 116
DAF + N G +V L +L IG ++
Sbjct: 96 LDAFL---RKNDGRFTVIQLVGMLRGIGSGMK 124
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 10/92 (10%)
Query: 32 ELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFLDLMAKHMKPEP-------FDRQL 84
E+ + +++L T Q + +SE + FD P + L K +P +
Sbjct: 42 EICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGS 101
Query: 85 RDAFKVLDKDNTGFVSVSDLRHILTSIGEKLE 116
DAF + N G +V L +L IG ++
Sbjct: 102 LDAFL---RKNDGRFTVIQLVGMLRGIGSGMK 130
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 79 PFDRQLRDAFKVLDKDNTGFVSVSDLRHILTS--------IGEKLEPSEFDEWIREVDVG 130
P +++ AFK+ D TGF+ +L+ ++ + + E + D+ + D
Sbjct: 108 PVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRK 167
Query: 131 SDGKI---KYEDFIA 142
+DGKI +++DF++
Sbjct: 168 NDGKIDIDEWKDFVS 182
>pdb|1SQD|A Chain A, Structural Basis For Inhibitor Selectivity Revealed By
Crystal Structures Of Plant And Mammalian 4-
Hydroxyphenylpyruvate Dioxygenases
pdb|1TFZ|A Chain A, Structural Basis For Herbicidal Inhibitor Selectivity
Revealed By Comparison Of Crystal Structures Of Plant
And Mammalian 4- Hydroxyphenylpyruvate Dioxygenases
pdb|1TG5|A Chain A, Crystal Structures Of Plant 4-Hydroxyphenylpyruvate
Dioxygenases Complexed With Das645
Length = 424
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPT 45
+G LSDDQ+ +E L D D G + L I + LG PT
Sbjct: 329 VGDVLSDDQIKECEELGILVDRDDQGTL----LQIFTKPLGDRPT 369
>pdb|2IBS|A Chain A, Crystal Structure Of The Adenine-Specific Dna
Methyltransferase M.Taqi Complexed With The Cofactor
Analog Aeta And A 10 Bp Dna Containing 2-Aminopurine At
The Target Position
pdb|2IBS|D Chain D, Crystal Structure Of The Adenine-Specific Dna
Methyltransferase M.Taqi Complexed With The Cofactor
Analog Aeta And A 10 Bp Dna Containing 2-Aminopurine At
The Target Position
pdb|2IBT|A Chain A, Crystal Structure Of The Adenine-Specific Dna
Methyltransferase M.Taqi Complexed With The Cofactor
Analog Aeta And A 10 Bp Dna Containing 2- Aminopurine At
The Target Position And An Abasic Site Analog At The
Target Base Partner Position
pdb|2IBT|D Chain D, Crystal Structure Of The Adenine-Specific Dna
Methyltransferase M.Taqi Complexed With The Cofactor
Analog Aeta And A 10 Bp Dna Containing 2- Aminopurine At
The Target Position And An Abasic Site Analog At The
Target Base Partner Position
pdb|2JG3|A Chain A, Mtaqi With Baz
pdb|2JG3|D Chain D, Mtaqi With Baz
pdb|2IH2|A Chain A, Crystal Structure Of The Adenine-Specific Dna
Methyltransferase M.Taqi Complexed With The Cofactor
Analog Aeta And A 10 Bp Dna Containing 5-
Methylpyrimidin-2(1h)-One At The Target Base Partner
Position
pdb|2IH2|D Chain D, Crystal Structure Of The Adenine-Specific Dna
Methyltransferase M.Taqi Complexed With The Cofactor
Analog Aeta And A 10 Bp Dna Containing 5-
Methylpyrimidin-2(1h)-One At The Target Base Partner
Position
pdb|2IH4|A Chain A, Crystal Structure Of The Adenine-Specific Dna
Methyltransferase M.Taqi Complexed With The Cofactor
Analog Aeta And A 10 Bp Dna Containing Pyrrolo-Dc At The
Target Base Partner Position
pdb|2IH4|D Chain D, Crystal Structure Of The Adenine-Specific Dna
Methyltransferase M.Taqi Complexed With The Cofactor
Analog Aeta And A 10 Bp Dna Containing Pyrrolo-Dc At The
Target Base Partner Position
pdb|2IH5|A Chain A, Crystal Structure Of The Adenine-Specific Dna
Methyltransferase M.Taqi Complexed With The Cofactor
Analog Aeta And A 10 Bp Dna Containing An Abasic Site
Analog At The Target Base Partner Position
pdb|2NP6|A Chain A, Crystal Structure Of The Adenine-Specific Dna
Methyltransferase M.Taqi Complexed With The Cofactor
Analog Aeta And A 10 Bp Dna Containing An Abasic Site
Analog At The Target Position
pdb|2NP6|D Chain D, Crystal Structure Of The Adenine-Specific Dna
Methyltransferase M.Taqi Complexed With The Cofactor
Analog Aeta And A 10 Bp Dna Containing An Abasic Site
Analog At The Target Position
pdb|2NP7|A Chain A, Crystal Structure Of The Adenine-Specific Dna
Methyltransferase M.Taqi Complexed With The Cofactor
Analog Aeta And A 10 Bp Dna Containing An Abasic Site
Analog At The Target Position And Pyrrolo-Dc At The
Target Base Partner Position
Length = 421
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 16/99 (16%)
Query: 65 PRFLDLMAKH---MKPEPFDRQLRDAFK-----VLDKDNTGFVSVSDLR--------HIL 108
P ++D H P+ ++LRD + V T V+ D R H+L
Sbjct: 300 PGWVDYEKNHSGLWMPKERAKELRDFYATPHLVVAHTKGTRVVAAWDERAYPWREEFHLL 359
Query: 109 TSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 147
G +L+PS +W+ + + Y DF+ + +
Sbjct: 360 PKEGVRLDPSSLVQWLNSEAMQKHVRTLYRDFVPHLTLR 398
>pdb|1AQJ|A Chain A, Structure Of Adenine-n6-dna-methyltransferase Taqi
pdb|1AQJ|B Chain B, Structure Of Adenine-n6-dna-methyltransferase Taqi
Length = 421
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 16/99 (16%)
Query: 65 PRFLDLMAKH---MKPEPFDRQLRDAFK-----VLDKDNTGFVSVSDLR--------HIL 108
P ++D H P+ ++LRD + V T V+ D R H+L
Sbjct: 300 PGWVDYEKNHSGLWMPKERAKELRDFYATPHLVVAHTKGTRVVAAWDERAYPWREEFHLL 359
Query: 109 TSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 147
G +L+PS +W+ + + Y DF+ + +
Sbjct: 360 PKEGVRLDPSSLVQWLNSEAMQKHVRTLYRDFVPHLTLR 398
>pdb|1SP9|A Chain A, 4-hydroxyphenylpyruvate Dioxygenase
pdb|1SP9|B Chain B, 4-hydroxyphenylpyruvate Dioxygenase
Length = 445
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 1 MGKDLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPT 45
+G LSDDQ+ +E L D D G + L I + LG PT
Sbjct: 350 VGDVLSDDQIKECEELGILVDRDDQGTL----LQIFTKPLGDRPT 390
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 10/92 (10%)
Query: 32 ELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFLDLMAKHMKPEP-------FDRQL 84
E+ + +++L T Q + +SE + FD P + L K +P +
Sbjct: 57 EICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGS 116
Query: 85 RDAFKVLDKDNTGFVSVSDLRHILTSIGEKLE 116
DAF + N G +V L +L IG ++
Sbjct: 117 LDAFL---RKNDGRFTVIQLVGMLRGIGSGMK 145
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 15/74 (20%)
Query: 83 QLRDAFKVLDKDNTGFVSVSDL----RHILTSIGEKLEPSE-----------FDEWIREV 127
+L+ F D D G + +D +HI + G+ +E FD +E
Sbjct: 8 RLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEA 67
Query: 128 DVGSDGKIKYEDFI 141
VGSDG + E FI
Sbjct: 68 GVGSDGSLTEEQFI 81
>pdb|1G38|A Chain A, Adenine-Specific Methyltransferase M. Taq IDNA COMPLEX
pdb|1G38|D Chain D, Adenine-Specific Methyltransferase M. Taq IDNA COMPLEX
Length = 393
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 16/99 (16%)
Query: 65 PRFLDLMAKH---MKPEPFDRQLRDAFK-----VLDKDNTGFVSVSDLR--------HIL 108
P ++D H P+ ++LRD + V T V+ D R H+L
Sbjct: 280 PGWVDYEKNHSGLWMPKERAKELRDFYATPHLVVAHTKGTRVVAAWDERAYPWREEFHLL 339
Query: 109 TSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 147
G +L+PS +W+ + + Y DF+ + +
Sbjct: 340 PKEGVRLDPSSLVQWLNSEAMQKHVRTLYRDFVPHLTLR 378
>pdb|1AQI|A Chain A, Structure Of Adenine-N6-Dna-Methyltransferase Taqi
pdb|1AQI|B Chain B, Structure Of Adenine-N6-Dna-Methyltransferase Taqi
pdb|2ADM|A Chain A, Adenine-N6-Dna-Methyltransferase Taqi
pdb|2ADM|B Chain B, Adenine-N6-Dna-Methyltransferase Taqi
Length = 421
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 16/99 (16%)
Query: 65 PRFLDLMAKH---MKPEPFDRQLRDAFK-----VLDKDNTGFVSVSDLR--------HIL 108
P ++D H P+ ++LRD + V T V+ D R H+L
Sbjct: 300 PGWVDYEKNHSGLWMPKERAKELRDFYATPHLVVAHTKGTRVVAAWDERAYPWREEFHLL 359
Query: 109 TSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 147
G +L+PS +W+ + + Y DF+ + +
Sbjct: 360 PKEGVRLDPSTLVQWLNSEAMQKHVRTLYRDFVPHLTLR 398
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 6 SDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQL 49
SDD++ +K + L D DGDGK+ E+ + G Q+
Sbjct: 1 SDDKIG-LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQV 43
>pdb|3HJN|A Chain A, Crystal Structure Of Thymidylate Kinase In Complex With
Dtdp And Adp From Thermotoga Maritima
pdb|3HJN|B Chain B, Crystal Structure Of Thymidylate Kinase In Complex With
Dtdp And Adp From Thermotoga Maritima
Length = 197
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 35 ILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVL 91
IL R GG T +++ I+ EE++T + FL L ++++ + L + + VL
Sbjct: 32 ILKREPGGTETGEKIRKILLEEEVTPKAEL--FLFLASRNLLVTEIKQYLSEGYAVL 86
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By X-
Ray Crystallography
Length = 76
Score = 26.2 bits (56), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 117 PSEFDEWIREVDVGSDGKIKYEDF 140
PS DE E+D DG++ +E+F
Sbjct: 44 PSTLDELFEELDKNGDGEVSFEEF 67
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The Structure
Of Other Calcium-Binding Proteins
Length = 75
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 117 PSEFDEWIREVDVGSDGKIKYEDF 140
PS DE E+D DG++ +E+F
Sbjct: 43 PSTLDELFEELDKNGDGEVSFEEF 66
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 17/79 (21%)
Query: 80 FDRQLRDAFKVLDKDNTGFVSVSDLRHILTSI----------------GEKLEPSE-FDE 122
+ +L+ FK+ DKD G + +L I+ SI G+ L P E D
Sbjct: 93 LEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDR 152
Query: 123 WIREVDVGSDGKIKYEDFI 141
VD DG++ +F+
Sbjct: 153 IFLLVDENGDGQLSLNEFV 171
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 17/21 (80%)
Query: 13 MKEAFTLFDTDGDGKIAPSEL 33
++ AF+L+D DG+G I+ +E+
Sbjct: 109 LEWAFSLYDVDGNGTISKNEV 129
>pdb|3A8R|A Chain A, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
pdb|3A8R|B Chain B, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
Length = 179
Score = 25.8 bits (55), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 73 KHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHI--LTSIGEKLE--PSEFDEW----I 124
+ + + FD +LR F ++DK+ G ++ +++ I L++ KL DE+ +
Sbjct: 89 EQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIM 148
Query: 125 REVDVGSDGKIKYEDFIARMV 145
E+D + G I+ ED A ++
Sbjct: 149 EELDPTNLGYIEMEDLEALLL 169
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 25.8 bits (55), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Query: 10 VSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIIS--EEKLTAPFDFPRF 67
+ + F D DG + E + LG QA+ + + + + D F
Sbjct: 36 IQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEF 95
Query: 68 LDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGE-KLEPSEFDE 122
L + M + + + AF LD+ G V+V DLR + + K+ E+ E
Sbjct: 96 LRALRPPMS-QAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTE 150
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.137 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,692,773
Number of Sequences: 62578
Number of extensions: 193366
Number of successful extensions: 1476
Number of sequences better than 100.0: 308
Number of HSP's better than 100.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 635
Number of HSP's gapped (non-prelim): 554
length of query: 147
length of database: 14,973,337
effective HSP length: 90
effective length of query: 57
effective length of database: 9,341,317
effective search space: 532455069
effective search space used: 532455069
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.7 bits)