Query 032085
Match_columns 147
No_of_seqs 204 out of 1076
Neff 7.2
Searched_HMMs 13730
Date Mon Mar 25 15:06:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032085.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032085hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lwma_ a.21.1.1 (A:) NHP6a {B 99.9 1.9E-25 1.4E-29 150.4 12.6 86 27-113 8-93 (93)
2 d1hsma_ a.21.1.1 (A:) High mob 99.9 7.1E-25 5.1E-29 143.2 8.7 78 38-116 1-78 (79)
3 d1k99a_ a.21.1.1 (A:) Nucleola 99.9 1.6E-24 1.1E-28 145.0 8.5 85 31-116 2-86 (91)
4 d1gt0d_ a.21.1.1 (D:) Sox-2 {M 99.9 4.7E-24 3.4E-28 140.0 7.6 74 38-112 1-74 (80)
5 d1j46a_ a.21.1.1 (A:) SRY {Hum 99.9 1.2E-23 8.7E-28 139.3 8.2 74 38-112 3-76 (85)
6 d1i11a_ a.21.1.1 (A:) Sox-5 {M 99.9 1.1E-23 7.9E-28 134.8 6.1 69 39-108 2-70 (70)
7 d1ckta_ a.21.1.1 (A:) High mob 99.9 7.6E-23 5.5E-27 130.8 8.8 70 39-108 1-71 (71)
8 d1qrva_ a.21.1.1 (A:) HMG-D {D 99.9 1E-22 7.3E-27 131.1 9.3 71 38-111 2-72 (73)
9 d2lefa_ a.21.1.1 (A:) Lymphoid 99.9 1.2E-22 8.8E-27 134.7 8.6 74 39-113 2-75 (86)
10 d1wgfa_ a.21.1.1 (A:) Nucleola 99.9 6.7E-22 4.9E-26 131.8 8.4 73 31-104 12-84 (90)
11 d1v64a_ a.21.1.1 (A:) Nucleola 99.9 1.9E-21 1.4E-25 133.7 10.7 82 30-116 8-89 (108)
12 d1v63a_ a.21.1.1 (A:) Nucleola 99.8 3.1E-21 2.3E-25 131.0 9.1 78 37-117 6-83 (101)
13 d1l8ya_ a.21.1.1 (A:) Nucleola 97.0 0.0031 2.2E-07 38.7 8.5 73 39-113 3-75 (84)
14 d1kxpd3 a.126.1.1 (D:405-473) 50.3 19 0.0014 20.7 4.9 33 45-78 9-41 (69)
15 d1o20a_ c.82.1.1 (A:) Gamma-gl 20.2 80 0.0058 23.2 5.4 39 71-109 9-47 (414)
16 d1v65a_ a.212.1.1 (A:) hypothe 20.2 38 0.0027 19.1 2.6 17 77-93 20-36 (64)
No 1
>d1lwma_ a.21.1.1 (A:) NHP6a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.93 E-value=1.9e-25 Score=150.40 Aligned_cols=86 Identities=36% Similarity=0.672 Sum_probs=80.3
Q ss_pred CccCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhcCCChHhhHHHHHHHHHHHHHHHHHHH
Q 032085 27 RTAKPKAAKDPNKPKRPPSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQ 106 (147)
Q Consensus 27 ~k~kkk~~~dp~~PKrP~say~lF~~e~r~~~k~~~p~~~~~~ei~k~l~~~Wk~ls~~eK~~Y~~~A~~~k~~y~~~~~ 106 (147)
+++..+..++|++||||+|||||||+++|..|+.+||+ +++.+|++.||.+|++||+++|.+|.++|..++.+|..+|.
T Consensus 8 ~k~~~k~~k~p~~PKrP~saf~lF~~e~r~~ik~~~p~-~~~~ei~k~l~~~W~~ls~~eK~~y~~~a~~~k~~y~~e~~ 86 (93)
T d1lwma_ 8 KKRTTRKKKDPNAPKRALSAYMFFANENRDIVRSENPD-ITFGQVGKKLGEKWKALTPEEKQPYEAKAQADKKRYESEKE 86 (93)
T ss_dssp TSCCCSCCCCSSCCCCCCCHHHHHHHHHHHHHHHHCTT-SCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccCCCCcCCCCCCCCHHHHHHHHHHHHHHHhCCC-CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445567899999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHhhcc
Q 032085 107 DYNKQLA 113 (147)
Q Consensus 107 ~y~~k~~ 113 (147)
.|++++.
T Consensus 87 ~y~~~l~ 93 (93)
T d1lwma_ 87 LYNATLA 93 (93)
T ss_dssp HHHHHHC
T ss_pred HHHhccC
Confidence 9998863
No 2
>d1hsma_ a.21.1.1 (A:) High mobility group protein 1, HMG1 {Hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.91 E-value=7.1e-25 Score=143.25 Aligned_cols=78 Identities=40% Similarity=0.766 Sum_probs=74.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhcCCChHhhHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 032085 38 NKPKRPPSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYNKQLADGV 116 (147)
Q Consensus 38 ~~PKrP~say~lF~~e~r~~~k~~~p~~~~~~ei~k~l~~~Wk~ls~~eK~~Y~~~A~~~k~~y~~~~~~y~~k~~~~~ 116 (147)
|.||||+|||||||+++|..|+.+||+ +++.+|+++||.+|+.||+++|.+|..+|..++.+|..+|+.|+.+..+..
T Consensus 1 NaPKrP~say~~f~~~~r~~i~~~~p~-~~~~ei~k~~~~~W~~ls~~eK~~y~~~a~~~k~~Y~~e~~~y~~k~~~~a 78 (79)
T d1hsma_ 1 NAPKRPPSAFFLFCSEYRPKIKGEHPG-LSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDA 78 (79)
T ss_dssp CCCCCCCCSHHHHHHHHHHHHHHHCTT-CCTTTHHHHHHHHHHTSCSTTTHHHHHHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred CcCCCCCcHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHhhHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC
Confidence 579999999999999999999999999 999999999999999999999999999999999999999999999876553
No 3
>d1k99a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream binding factor 1, UBF-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=1.6e-24 Score=145.05 Aligned_cols=85 Identities=25% Similarity=0.542 Sum_probs=80.9
Q ss_pred CccCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhcCCChHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 032085 31 PKAAKDPNKPKRPPSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYNK 110 (147)
Q Consensus 31 kk~~~dp~~PKrP~say~lF~~e~r~~~k~~~p~~~~~~ei~k~l~~~Wk~ls~~eK~~Y~~~A~~~k~~y~~~~~~y~~ 110 (147)
++..+||+.|+||+||||||++++|..|+..||+ +++.+|+++||.+|+.||+++|.+|.++|..++.+|..+|..|..
T Consensus 2 kk~kk~p~~PKrP~say~lf~~~~r~~~~~~~p~-~~~~ev~k~l~~~W~~ls~~eK~~y~~~a~~~~~~y~~~~~~y~~ 80 (91)
T d1k99a_ 2 KKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPE-MSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFRE 80 (91)
T ss_dssp CCCCSSSSSCCCSCCHHHHHHHHHHHHHHTTCTT-SCSHHHHHHHHHHHHHSCSTTHHHHHHHHHHHHHHHHHHHGGGGG
T ss_pred CCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHhHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred hcccCc
Q 032085 111 QLADGV 116 (147)
Q Consensus 111 k~~~~~ 116 (147)
.+++..
T Consensus 81 ~~pe~~ 86 (91)
T d1k99a_ 81 DHPDLI 86 (91)
T ss_dssp CCCCCS
T ss_pred HCcccc
Confidence 987543
No 4
>d1gt0d_ a.21.1.1 (D:) Sox-2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.89 E-value=4.7e-24 Score=139.95 Aligned_cols=74 Identities=30% Similarity=0.565 Sum_probs=71.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhcCCChHhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032085 38 NKPKRPPSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYNKQL 112 (147)
Q Consensus 38 ~~PKrP~say~lF~~e~r~~~k~~~p~~~~~~ei~k~l~~~Wk~ls~~eK~~Y~~~A~~~k~~y~~~~~~y~~k~ 112 (147)
++||||+||||||++++|..|+.+||+ +++.+|+++||.+|++|++++|++|..+|..++++|..+|+.|+.+.
T Consensus 1 ~kiKRP~nAy~lF~~~~r~~~~~~~p~-~~~~eisk~~g~~W~~l~~eeK~~y~~~A~~~k~~y~~~~p~Yk~~p 74 (80)
T d1gt0d_ 1 DRVKRPMNAFMVWSRGQRRKMAQENPK-MHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRP 74 (80)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHHTTSTT-SCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCCCCC
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHCcCCHHHHHHHHHHHHHHHHHHHHHCccccCCC
Confidence 579999999999999999999999999 99999999999999999999999999999999999999999998653
No 5
>d1j46a_ a.21.1.1 (A:) SRY {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=1.2e-23 Score=139.31 Aligned_cols=74 Identities=27% Similarity=0.513 Sum_probs=71.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhcCCChHhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 032085 38 NKPKRPPSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYNKQL 112 (147)
Q Consensus 38 ~~PKrP~say~lF~~e~r~~~k~~~p~~~~~~ei~k~l~~~Wk~ls~~eK~~Y~~~A~~~k~~y~~~~~~y~~k~ 112 (147)
++||||+|||||||+++|..|+.+||+ +++.+|+++||.+|++||+++|.+|.++|..++.+|..+|+.|+.+.
T Consensus 3 ~~iKRP~nay~lF~~~~r~~i~~~~p~-~~~~eisk~ig~~W~~L~~eeK~~y~~~A~~~k~~y~~~~~~yk~~p 76 (85)
T d1j46a_ 3 DRVKRPMNAFIVWSRDQRRKMALENPR-MRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYKYRP 76 (85)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHHHHSTT-SCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCCCCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhcc-CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhHHhccCC
Confidence 789999999999999999999999999 99999999999999999999999999999999999999999998754
No 6
>d1i11a_ a.21.1.1 (A:) Sox-5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.88 E-value=1.1e-23 Score=134.78 Aligned_cols=69 Identities=29% Similarity=0.564 Sum_probs=66.4
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhcCCChHhhHHHHHHHHHHHHHHHHHHHHH
Q 032085 39 KPKRPPSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDY 108 (147)
Q Consensus 39 ~PKrP~say~lF~~e~r~~~k~~~p~~~~~~ei~k~l~~~Wk~ls~~eK~~Y~~~A~~~k~~y~~~~~~y 108 (147)
++|||+|||||||+++|..|+.+||+ +++.+|+++||.+|++||+++|++|.++|+.++++|.+++++|
T Consensus 2 ~iKRP~nay~lf~~~~r~~i~~~~p~-~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~~~~~~p~Y 70 (70)
T d1i11a_ 2 HIKRPMNAFMVWAKDERRKILQAFPD-MHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDY 70 (70)
T ss_dssp CSCCSCCHHHHHHHHHHHHHHTTCSS-CCHHHHHHHHHHHHTTSCSGGGHHHHHHHHHHHHHHHTTCSCC
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHhcc-CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCcCC
Confidence 67999999999999999999999999 9999999999999999999999999999999999999887766
No 7
>d1ckta_ a.21.1.1 (A:) High mobility group protein 1, HMG1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.88 E-value=7.6e-23 Score=130.85 Aligned_cols=70 Identities=31% Similarity=0.646 Sum_probs=66.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHhcCCChHhhHHHHHHHHHHHHHHHHHHHHH
Q 032085 39 KPKRPPSAFFVFMEEFRKQFKEAHPN-NKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDY 108 (147)
Q Consensus 39 ~PKrP~say~lF~~e~r~~~k~~~p~-~~~~~ei~k~l~~~Wk~ls~~eK~~Y~~~A~~~k~~y~~~~~~y 108 (147)
+||||+|||||||+++|..|+.+||+ .+++.+|+++||.+|+.||+++|++|.++|..++++|..+|+.|
T Consensus 1 KPKrP~say~~f~~~~r~~~k~~~p~~~~~~~ei~k~~~~~Wk~ls~~eK~~y~~~a~~~k~~y~~e~~~Y 71 (71)
T d1ckta_ 1 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY 71 (71)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHTCCTTTSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 59999999999999999999999997 24689999999999999999999999999999999999999887
No 8
>d1qrva_ a.21.1.1 (A:) HMG-D {Drosophila melanogaster [TaxId: 7227]}
Probab=99.88 E-value=1e-22 Score=131.10 Aligned_cols=71 Identities=32% Similarity=0.717 Sum_probs=68.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhcCCChHhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 032085 38 NKPKRPPSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYNKQ 111 (147)
Q Consensus 38 ~~PKrP~say~lF~~e~r~~~k~~~p~~~~~~ei~k~l~~~Wk~ls~~eK~~Y~~~A~~~k~~y~~~~~~y~~k 111 (147)
++||||+|||||||+++|..|+.+||+ +++.+|+++||.+|++|+ +|++|.++|..++++|..+|+.|+.+
T Consensus 2 n~PKrP~say~lf~~~~r~~~k~~~p~-~~~~eisk~l~~~Wk~~~--eK~~y~~~a~~~k~~y~~~~~~y~~~ 72 (73)
T d1qrva_ 2 DKPKRPLSAYMLWLNSARESIKRENPG-IKVTEVAKRGGELWRAMK--DKSEWEAKAAKAKDDYDRAVKEFEAN 72 (73)
T ss_dssp CSCCCCCCHHHHHHHHHHHHHHHTSTT-CCHHHHHHHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccCCCCCcHHHHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHhcChh--HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 789999999999999999999999999 999999999999999986 49999999999999999999999875
No 9
>d2lefa_ a.21.1.1 (A:) Lymphoid enhancer-binding factor, LEF1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.87 E-value=1.2e-22 Score=134.68 Aligned_cols=74 Identities=23% Similarity=0.426 Sum_probs=70.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhcCCChHhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 032085 39 KPKRPPSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYNKQLA 113 (147)
Q Consensus 39 ~PKrP~say~lF~~e~r~~~k~~~p~~~~~~ei~k~l~~~Wk~ls~~eK~~Y~~~A~~~k~~y~~~~~~y~~k~~ 113 (147)
++|||+||||||++++|..|..+||+ +++.+|+++||.+|++||+++|++|.++|..++++|..++++|.....
T Consensus 2 hikRP~naf~lF~~~~r~~~~~~~P~-~~~~~Isk~lg~~Wk~ls~~eK~~y~~~A~~~k~~~~~~~p~yk~~~~ 75 (86)
T d2lefa_ 2 HIKKPLNAFMLYMKEMRANVVAESTL-KESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDN 75 (86)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHSSC-CCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHSTTCCSCSS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 68999999999999999999999999 999999999999999999999999999999999999999999976543
No 10
>d1wgfa_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=6.7e-22 Score=131.76 Aligned_cols=73 Identities=32% Similarity=0.545 Sum_probs=68.0
Q ss_pred CccCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhcCCChHhhHHHHHHHHHHHHHHHHH
Q 032085 31 PKAAKDPNKPKRPPSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKN 104 (147)
Q Consensus 31 kk~~~dp~~PKrP~say~lF~~e~r~~~k~~~p~~~~~~ei~k~l~~~Wk~ls~~eK~~Y~~~A~~~k~~y~~~ 104 (147)
.....+++.||||+|||||||+++|..|+..||+ +++.+|+++||.+|+.|++++|.+|.++|..++.+|..+
T Consensus 12 ~~~~~~~~~PKrP~say~lF~~e~r~~~~~~~p~-~~~~ei~k~l~~~W~~Ls~~eK~~Y~~~A~~~k~~y~~~ 84 (90)
T d1wgfa_ 12 EGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPE-LSESELTRLLARMWNDLSEKKKAKYKAREAALKAQSERK 84 (90)
T ss_dssp CCCSSCCCCCCCCCCHHHHHHHHTHHHHHHHCTT-SCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTTTCCC
T ss_pred cCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4456789999999999999999999999999999 999999999999999999999999999999998888643
No 11
>d1v64a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=1.9e-21 Score=133.72 Aligned_cols=82 Identities=18% Similarity=0.391 Sum_probs=74.3
Q ss_pred CCccCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhcCCChHhhHHHHHHHHHHHHHHHHHHHHHH
Q 032085 30 KPKAAKDPNKPKRPPSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYN 109 (147)
Q Consensus 30 kkk~~~dp~~PKrP~say~lF~~e~r~~~k~~~p~~~~~~ei~k~l~~~Wk~ls~~eK~~Y~~~A~~~k~~y~~~~~~y~ 109 (147)
+.+...++.+||+|+|||||||+++|.+ +|+ +++.+|+++||.+|++||+++|++|.++|..++.+|..+|+.|.
T Consensus 8 ~~k~~~~~~p~K~P~~ay~lF~~~~r~~----~~~-~~~~e~~k~ig~~W~~Ls~~eK~~Y~~~a~~~k~~Y~~~~~~y~ 82 (108)
T d1v64a_ 8 QLKDKFDGRPTKPPPNSYSLYCAELMAN----MKD-VPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFL 82 (108)
T ss_dssp CSSCCTTTSCCCCCSSHHHHHHHHHHHH----CTT-SCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCCCCCCCcHHHHHHHHHHHH----ccC-CCHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555678889999999999999998864 577 89999999999999999999999999999999999999999999
Q ss_pred hhcccCc
Q 032085 110 KQLADGV 116 (147)
Q Consensus 110 ~k~~~~~ 116 (147)
.++++..
T Consensus 83 ~~~~~~~ 89 (108)
T d1v64a_ 83 ESLPEEE 89 (108)
T ss_dssp HHSCHHH
T ss_pred hhCCHHH
Confidence 9887543
No 12
>d1v63a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=3.1e-21 Score=130.95 Aligned_cols=78 Identities=17% Similarity=0.298 Sum_probs=71.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhcCCChHhhHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 032085 37 PNKPKRPPSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYNKQLADGV 116 (147)
Q Consensus 37 p~~PKrP~say~lF~~e~r~~~k~~~p~~~~~~ei~k~l~~~Wk~ls~~eK~~Y~~~A~~~k~~y~~~~~~y~~k~~~~~ 116 (147)
..|||||+|||||||+++|..+... + +++.+|+++||.+|+.||+++|++|.++|..++.+|..+|..|...+++..
T Consensus 6 ~~p~KrP~~ay~~F~~e~r~~~~~~--~-~~~~ei~k~~g~~Wk~ls~~eK~~Y~~~a~~~~~~y~~e~~~y~~~~~~~~ 82 (101)
T d1v63a_ 6 SGPKKPPMNGYQKFSQELLSNGELN--H-LPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQD 82 (101)
T ss_dssp CSSCCCCSSSHHHHHHHHHHHCTTT--T-SCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhc--C-CCHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 4689999999999999999988644 4 678999999999999999999999999999999999999999999988655
Q ss_pred c
Q 032085 117 N 117 (147)
Q Consensus 117 ~ 117 (147)
.
T Consensus 83 ~ 83 (101)
T d1v63a_ 83 R 83 (101)
T ss_dssp H
T ss_pred H
Confidence 4
No 13
>d1l8ya_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream binding factor 1, UBF-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.03 E-value=0.0031 Score=38.72 Aligned_cols=73 Identities=18% Similarity=0.336 Sum_probs=61.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhcCCChHhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 032085 39 KPKRPPSAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYNKQLA 113 (147)
Q Consensus 39 ~PKrP~say~lF~~e~r~~~k~~~p~~~~~~ei~k~l~~~Wk~ls~~eK~~Y~~~A~~~k~~y~~~~~~y~~k~~ 113 (147)
-|-.|.+|--||.+.....+...+-. .-.-..+.+-..|++|...++-+|...|.++..+|+.++-+-+...+
T Consensus 3 lpetpktaeeiWQqsvIgdYlA~fk~--DR~KaqkaMeatW~~meKkEki~wikkaaedqkryerel~emr~~~a 75 (84)
T d1l8ya_ 3 LPESPKRAEEIWQQSVIGDYLARFKN--DRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPA 75 (84)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHTTS--THHHHHHHHHHHHHTTGGGHHHHHHHHHHHHHHHHHHHHHTTSCGGG
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 46778899999999998888887764 45566677888999999999999999999999999999887665443
No 14
>d1kxpd3 a.126.1.1 (D:405-473) Vitamin D binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.30 E-value=19 Score=20.69 Aligned_cols=33 Identities=12% Similarity=0.353 Sum_probs=27.0
Q ss_pred CHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHH
Q 032085 45 SAFFVFMEEFRKQFKEAHPNNKSVATVGKAAGEK 78 (147)
Q Consensus 45 say~lF~~e~r~~~k~~~p~~~~~~ei~k~l~~~ 78 (147)
+.|.-|.......++...|+ .+..+|..++.++
T Consensus 9 ~tFte~kkkL~e~lr~k~P~-as~~~l~~mVekr 41 (69)
T d1kxpd3 9 NTFTEYKKKLAERLKAKLPD-ATPKELAKLVNKR 41 (69)
T ss_dssp SCHHHHHHHHHHHHHHHCTT-SCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhhCCC-CCHHHHHHHHHHH
Confidence 46888888888999999999 8888887776543
No 15
>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]}
Probab=20.20 E-value=80 Score=23.16 Aligned_cols=39 Identities=13% Similarity=0.199 Sum_probs=32.1
Q ss_pred HHHHHHHHhcCCChHhhHHHHHHHHHHHHHHHHHHHHHH
Q 032085 71 VGKAAGEKWKSMSEDEKAPFVERAEKRKSDYNKNMQDYN 109 (147)
Q Consensus 71 i~k~l~~~Wk~ls~~eK~~Y~~~A~~~k~~y~~~~~~y~ 109 (147)
-++..-..|+.+|..+|..+..........+..++....
T Consensus 9 ~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~ 47 (414)
T d1o20a_ 9 KVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEAN 47 (414)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 345556689999999999999999999988888876543
No 16
>d1v65a_ a.212.1.1 (A:) hypotheical protein 2610044O15Rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.20 E-value=38 Score=19.11 Aligned_cols=17 Identities=24% Similarity=0.554 Sum_probs=14.7
Q ss_pred HHhcCCChHhhHHHHHH
Q 032085 77 EKWKSMSEDEKAPFVER 93 (147)
Q Consensus 77 ~~Wk~ls~~eK~~Y~~~ 93 (147)
+.|..|.+.+|..|.+.
T Consensus 20 EEW~~Ld~~Qk~LyrdV 36 (64)
T d1v65a_ 20 EEWDLLDSSQKRLYEEV 36 (64)
T ss_dssp HHHHTSCHHHHHHHHHH
T ss_pred HHHhCcCHHHHHHHHHh
Confidence 68999999999888763
Done!