BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032092
(147 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3MMY|A Chain A, Structural And Functional Analysis Of The Interaction
Between The Nucleoporin Nup98 And The Mrna Export Factor
Rae1
pdb|3MMY|C Chain C, Structural And Functional Analysis Of The Interaction
Between The Nucleoporin Nup98 And The Mrna Export Factor
Rae1
pdb|3MMY|E Chain E, Structural And Functional Analysis Of The Interaction
Between The Nucleoporin Nup98 And The Mrna Export Factor
Rae1
pdb|3MMY|G Chain G, Structural And Functional Analysis Of The Interaction
Between The Nucleoporin Nup98 And The Mrna Export Factor
Rae1
Length = 368
Score = 115 bits (289), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 87/150 (58%), Gaps = 28/150 (18%)
Query: 2 VVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQ----GFWVGSIEGRVGVH 57
VV TA+R L+V+ L+N +EF+RI SPLK+Q RCVA F D+Q GF +GSIEGRV +H
Sbjct: 184 VVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIH 243
Query: 58 HLDDSQQSK-NFTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVL 116
+++ +K NFTFKCHR S AP+ Y V +
Sbjct: 244 YINPPNPAKDNFTFKCHRSNGTNTS-----------APQ--DIYAVNG----------IA 280
Query: 117 FVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146
F +H T AT GSDG F+FWDKD++ +LK
Sbjct: 281 FHPVHGTLATVGSDGRFSFWDKDARTKLKT 310
>pdb|2I3S|A Chain A, Bub3 Complex With Bub1 Glebs Motif
pdb|2I3S|C Chain C, Bub3 Complex With Bub1 Glebs Motif
pdb|2I3S|E Chain E, Bub3 Complex With Bub1 Glebs Motif
Length = 349
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 31/126 (24%)
Query: 27 SPLKYQMRCVAAFP-DQQGFWVGSIEGRVGVHHLDDS----QQSKNFTFKCHRDGSETCS 81
S LKYQ+R VA P +Q+G+ SI+GRV V DD SK F F+CHR + +
Sbjct: 190 SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTN 249
Query: 82 VISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSK 141
+ Y V + F H TAGSDG + W+ ++
Sbjct: 250 LA----------------YPVNSIE----------FSPRHKFLYTAGSDGIISCWNLQTR 283
Query: 142 QRLKVF 147
+++K F
Sbjct: 284 KKIKNF 289
>pdb|1YFQ|A Chain A, High Resolution S. Cerevisiae Bub3 Mitotic Checkpoint
Protein
Length = 342
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 31/126 (24%)
Query: 27 SPLKYQMRCVAAFP-DQQGFWVGSIEGRVGVHHLDDS----QQSKNFTFKCHRDGSETCS 81
S LKYQ+R VA P +Q+G+ SI+GRV V DD SK F F+CHR + +
Sbjct: 190 SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTN 249
Query: 82 VISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSK 141
+ Y V + F H TAGSDG + W+ ++
Sbjct: 250 LA----------------YPVNSIE----------FSPRHKFLYTAGSDGIISCWNLQTR 283
Query: 142 QRLKVF 147
+++K F
Sbjct: 284 KKIKNF 289
>pdb|2I3T|A Chain A, Bub3 Complex With Mad3 (Bubr1) Glebs Motif
pdb|2I3T|C Chain C, Bub3 Complex With Mad3 (Bubr1) Glebs Motif
pdb|2I3T|E Chain E, Bub3 Complex With Mad3 (Bubr1) Glebs Motif
pdb|2I3T|G Chain G, Bub3 Complex With Mad3 (Bubr1) Glebs Motif
Length = 341
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 31/126 (24%)
Query: 27 SPLKYQMRCVAAFP-DQQGFWVGSIEGRVGVHHLDDS----QQSKNFTFKCHRDGSETCS 81
S LKYQ+R VA P +Q+G+ SI+GRV V DD SK F F+CHR + +
Sbjct: 190 SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTN 249
Query: 82 VISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSK 141
+ Y V + F H TAGSDG + W+ ++
Sbjct: 250 LA----------------YPVNSIE----------FSPRHKFLYTAGSDGIISCWNLQTR 283
Query: 142 QRLKVF 147
+++K F
Sbjct: 284 KKIKNF 289
>pdb|1U4C|A Chain A, Structure Of Spindle Checkpoint Protein Bub3
pdb|1U4C|B Chain B, Structure Of Spindle Checkpoint Protein Bub3
Length = 349
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 31/126 (24%)
Query: 27 SPLKYQMRCVAAFP-DQQGFWVGSIEGRVGVHHLDDS----QQSKNFTFKCHRDGSETCS 81
S LKYQ+R VA P +Q+G+ SI+GRV V DD SK F F+CHR + +
Sbjct: 190 SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTN 249
Query: 82 VISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSK 141
+ Y V + F H TAGSDG + W+ ++
Sbjct: 250 LA----------------YPVNSIE----------FSPRHKFLYTAGSDGIISCWNLQTR 283
Query: 142 QRLKVF 147
+++K F
Sbjct: 284 KKIKNF 289
>pdb|3SO3|C Chain C, Structures Of Fab-Protease Complexes Reveal A Highly
Specific Non- Canonical Mechanism Of Inhibition
Length = 228
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 22/110 (20%)
Query: 31 YQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVISFTSILA 90
Y M V P + WV +I G G + DS + + F RD S+ + +S+ A
Sbjct: 32 YAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGR---FTISRDNSKNTLYLQMSSLRA 88
Query: 91 GDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDS 140
D Y Y VK L + + V GAF+ W + +
Sbjct: 89 EDTAVY---YCVKDLGIAARRFV----------------SGAFDIWGQGT 119
>pdb|4DH2|B Chain B, Crystal Structure Of
Coh-olpc(cthe_0452)-doc435(cthe_0435) Complex: A Novel
Type I Cohesin-dockerin Complex From Clostridium
Thermocellum Attc 27405
pdb|4DH2|D Chain D, Crystal Structure Of
Coh-olpc(cthe_0452)-doc435(cthe_0435) Complex: A Novel
Type I Cohesin-dockerin Complex From Clostridium
Thermocellum Attc 27405
Length = 82
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 30 KYQMRCVAAFPDQQGFWVGSIEGRVGVHHLD 60
+Y +R +A FP WVG + G ++ +D
Sbjct: 26 RYILRIIADFPADDDMWVGDVNGDNVINDID 56
>pdb|1SQ9|A Chain A, Structure Of Ski8p, A Wd Repeat Protein Involved In Mrna
Degradation And Meiotic Recombination
Length = 397
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 122 HTFATAGSDGAFNFWDKDSKQRLKVF 147
T +AG DG FWD +K+R+
Sbjct: 304 ETLCSAGWDGKLRFWDVKTKERITTL 329
>pdb|1S4U|X Chain X, Crystal Structure Analysis Of The Beta-Propeller Protein
Ski8p
Length = 407
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 122 HTFATAGSDGAFNFWDKDSKQRLKVF 147
T +AG DG FWD +K+R+
Sbjct: 314 ETLCSAGWDGKLRFWDVKTKERITTL 339
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 56 VHHLDDSQQSKNFTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIV 115
H++D+Q+ + DGS SV + L+ +S K LH++ K+H
Sbjct: 20 ARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGE 79
Query: 116 L----FVQIHH 122
+ F +HH
Sbjct: 80 ITFDEFKDLHH 90
>pdb|2OR9|H Chain H, The Structure Of The Anti-C-Myc Antibody 9e10 Fab
FragmentEPITOPE PEPTIDE COMPLEX REVEALS A NOVEL BINDING
Mode Dominated By The Heavy Chain Hypervariable Loops
pdb|2OR9|I Chain I, The Structure Of The Anti-C-Myc Antibody 9e10 Fab
FragmentEPITOPE PEPTIDE COMPLEX REVEALS A NOVEL BINDING
Mode Dominated By The Heavy Chain Hypervariable Loops
pdb|2ORB|H Chain H, The Structure Of The Anti-C-Myc Antibody 9e10 Fab
Fragment
pdb|2ORB|I Chain I, The Structure Of The Anti-C-Myc Antibody 9e10 Fab
Fragment
Length = 228
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 31 YQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVISFTSILA 90
Y M V PD++ WV +I R H DS + + F RD + + S+ +
Sbjct: 32 YGMSWVRQTPDKRLEWVATIGSRGTYTHYPDSVKGR---FTISRDNDKNALYLQMNSLKS 88
Query: 91 GDAPKY 96
D Y
Sbjct: 89 EDTAMY 94
>pdb|3BN9|D Chain D, Crystal Structure Of Mt-Sp1 In Complex With Fab
Inhibitor E2
pdb|3BN9|F Chain F, Crystal Structure Of Mt-Sp1 In Complex With Fab
Inhibitor E2
Length = 257
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 31 YQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVISFTSILA 90
Y M V P + WV +I G G + DS + + F RD S+ + +S+ A
Sbjct: 32 YAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGR---FTISRDNSKNTLYLQMSSLRA 88
Query: 91 GDAPKY 96
D Y
Sbjct: 89 EDTAVY 94
>pdb|3UX9|B Chain B, Structural Insights Into A Human Anti-Ifn Antibody
Exerting Therapeutic Potential For Systemic Lupus
Erythematosus
pdb|3UX9|D Chain D, Structural Insights Into A Human Anti-Ifn Antibody
Exerting Therapeutic Potential For Systemic Lupus
Erythematosus
Length = 256
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Query: 30 KYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVISFTSIL 89
Y M V P + WV +I G G + DS + + F RD S+ + S+
Sbjct: 165 SYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGR---FTISRDNSKNTLYLQMNSLR 221
Query: 90 AGDAPKY 96
A D Y
Sbjct: 222 AEDTAVY 228
>pdb|3O8O|A Chain A, Structure Of Phosphofructokinase From Saccharomyces
Cerevisiae
pdb|3O8O|C Chain C, Structure Of Phosphofructokinase From Saccharomyces
Cerevisiae
pdb|3O8O|E Chain E, Structure Of Phosphofructokinase From Saccharomyces
Cerevisiae
pdb|3O8O|G Chain G, Structure Of Phosphofructokinase From Saccharomyces
Cerevisiae
Length = 787
Score = 26.9 bits (58), Expect = 4.4, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 56 VHHLDDSQQSKNFT----FKCHRDGSETCSVISFTSILAGDAPKYSSFYKV 102
V++ DD +QS + T F C G + + SFT ++ G Y+ K+
Sbjct: 544 VNYTDDIKQSASATRRRVFVCEVQGGHSGYIASFTGLITGAVSVYTPEKKI 594
>pdb|1IFH|H Chain H, A Detailed Analysis Of The Free And Bound Conformation
Of An Antibody: X-Ray Structures Of Anti-Peptide Fab
17(Slash)9 And Three Different Fab-Peptide Complexes
pdb|1HIL|B Chain B, Structural Evidence For Induced Fit As A Mechanism For
Antigen-Antibody Recognition
pdb|1HIL|D Chain D, Structural Evidence For Induced Fit As A Mechanism For
Antigen-Antibody Recognition
pdb|1HIM|L Chain L, Structural Evidence For Induced Fit As A Mechanism For
Antibody-Antigen Recognition
pdb|1HIM|M Chain M, Structural Evidence For Induced Fit As A Mechanism For
Antibody-Antigen Recognition
pdb|1HIN|H Chain H, Structural Evidence For Induced Fit As A Mechanism For
Antibody-Antigen Recognition
Length = 220
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 31 YQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVISFTSILA 90
Y M V PD++ WV +I G + DS + + F RD ++ + +S+ +
Sbjct: 32 YGMSWVRQTPDKRLEWVATISNGGGYTYYPDSVKGR---FTISRDNAKNTLYLQMSSLKS 88
Query: 91 GDAPKY 96
D+ Y
Sbjct: 89 EDSAMY 94
>pdb|1FRG|H Chain H, Crystal Structure, Sequence, And Epitope Mapping Of A
Peptide Complex Of An Anti-Influenza Ha Peptide
Antibody Fab 26(Slash)9: Fine-Tuning Antibody
Specificity
Length = 220
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 31 YQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVISFTSILA 90
+ M V PD++ WV +I G + DS + + F RD ++ + TS+ +
Sbjct: 32 FGMSWVRHTPDKRLEWVATISNGGGYTYYQDSVKGR---FTISRDNAKNTLFLEMTSLKS 88
Query: 91 GDAPKY 96
DA Y
Sbjct: 89 EDAGLY 94
>pdb|2VXS|H Chain H, Structure Of Il-17a In Complex With A Potent, Fully
Human Neutralising Antibody
pdb|2VXS|I Chain I, Structure Of Il-17a In Complex With A Potent, Fully
Human Neutralising Antibody
pdb|2VXS|J Chain J, Structure Of Il-17a In Complex With A Potent, Fully
Human Neutralising Antibody
pdb|2VXS|K Chain K, Structure Of Il-17a In Complex With A Potent, Fully
Human Neutralising Antibody
Length = 225
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 31 YQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVISFTSILA 90
Y M V P + WV +I G G + DS + + F RD S+ + S+ A
Sbjct: 32 YAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGR---FTISRDNSKNTLYLQMNSLRA 88
Query: 91 GDAPKY 96
D Y
Sbjct: 89 EDTAVY 94
>pdb|3QOS|H Chain H, Crystal Structure Of Human Germline Antibody 3-23B3
pdb|3QOS|B Chain B, Crystal Structure Of Human Germline Antibody 3-23B3
Length = 228
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 31 YQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVISFTSILA 90
Y M V P + WV +I G G + DS + + F RD S+ + S+ A
Sbjct: 32 YAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGR---FTISRDNSKNTLYLQMNSLRA 88
Query: 91 GDAPKY 96
D Y
Sbjct: 89 EDTAVY 94
>pdb|3KDM|H Chain H, Crystal Structure Of Human Anti-Steroid Fab 5f2 In
Complex With Testosterone
pdb|3KDM|B Chain B, Crystal Structure Of Human Anti-Steroid Fab 5f2 In
Complex With Testosterone
Length = 225
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 31 YQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVISFTSILA 90
Y M V P + WV +I G G + DS + + F RD S+ + S+ A
Sbjct: 32 YAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGR---FTISRDNSKNTLYLQMNSLRA 88
Query: 91 GDAPKY 96
D Y
Sbjct: 89 EDTAVY 94
>pdb|2XWU|B Chain B, Crystal Structure Of Importin 13 - Ubc9 Complex
Length = 963
Score = 26.2 bits (56), Expect = 7.6, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 14/82 (17%)
Query: 73 HRDGSETCSVISFT-------SILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFA 125
H +ET S ++ T IL+ +A K + + +V R F V++ Q
Sbjct: 349 HYPVNETTSSLTLTFWYTLQDDILSFEAEKQAVYQQVYRPVYFQLVDVLLHKAQFP---- 404
Query: 126 TAGSDGAFNFWDKDSKQRLKVF 147
SD + FW D K++ +++
Sbjct: 405 ---SDEEYGFWSSDEKEQFRIY 423
>pdb|2X19|B Chain B, Crystal Structure Of Importin13 - Rangtp Complex
Length = 963
Score = 25.8 bits (55), Expect = 8.3, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 14/82 (17%)
Query: 73 HRDGSETCSVISFT-------SILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFA 125
H +ET S ++ T IL+ +A K + + +V R F V++ Q
Sbjct: 349 HYPVNETTSSLTLTFWYTLQDDILSFEAEKQAVYQQVYRPVYFQLVDVLLHKAQF----- 403
Query: 126 TAGSDGAFNFWDKDSKQRLKVF 147
SD + FW D K++ +++
Sbjct: 404 --PSDEEYGFWSSDEKEQFRIY 423
>pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The
Structure Of A C. Elegans Homologue Of Yeast Actin
Interacting Protein 1 (Aip1).
pdb|1PEV|A Chain A, Crystal Structure Of The Actin Interacting Protein From
Caenorhabditis Elegans
Length = 611
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 28 PLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSK 66
P+ Y CVA D+Q VG + +V V+ L + S+
Sbjct: 446 PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSE 484
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.137 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,565,626
Number of Sequences: 62578
Number of extensions: 170529
Number of successful extensions: 543
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 515
Number of HSP's gapped (non-prelim): 34
length of query: 147
length of database: 14,973,337
effective HSP length: 90
effective length of query: 57
effective length of database: 9,341,317
effective search space: 532455069
effective search space used: 532455069
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.7 bits)