Query 032092
Match_columns 147
No_of_seqs 151 out of 1114
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 15:15:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032092.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032092hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 99.9 1.7E-22 5.7E-27 155.2 14.5 144 1-147 96-253 (344)
2 3ow8_A WD repeat-containing pr 99.9 5.9E-22 2E-26 150.3 17.1 142 1-147 137-286 (321)
3 2ynn_A Coatomer subunit beta'; 99.9 7.1E-22 2.4E-26 148.3 17.2 143 1-146 112-265 (304)
4 3frx_A Guanine nucleotide-bind 99.9 1.2E-21 4.1E-26 148.1 17.5 140 1-146 80-233 (319)
5 2ynn_A Coatomer subunit beta'; 99.9 1.5E-21 5E-26 146.5 16.7 139 1-143 28-175 (304)
6 3iz6_a 40S ribosomal protein R 99.9 1.2E-21 4.1E-26 151.3 16.2 140 1-143 221-378 (380)
7 4gqb_B Methylosome protein 50; 99.9 2.3E-21 7.7E-26 148.9 15.3 140 1-143 185-334 (344)
8 3ow8_A WD repeat-containing pr 99.9 5.1E-21 1.8E-25 145.1 16.5 144 1-146 51-201 (321)
9 2hes_X YDR267CP; beta-propelle 99.9 7.3E-21 2.5E-25 144.4 16.5 141 1-141 27-185 (330)
10 1got_B GT-beta; complex (GTP-b 99.9 6.4E-21 2.2E-25 145.1 16.2 142 1-146 157-307 (340)
11 1vyh_C Platelet-activating fac 99.9 3.7E-21 1.3E-25 150.1 14.9 142 1-146 123-271 (410)
12 4aow_A Guanine nucleotide-bind 99.9 4.9E-21 1.7E-25 143.4 14.4 138 1-143 188-340 (340)
13 4ggc_A P55CDC, cell division c 99.9 2E-20 7E-25 138.8 17.5 137 3-143 40-184 (318)
14 3fm0_A Protein CIAO1; WDR39,SG 99.9 1E-20 3.6E-25 144.3 16.1 142 1-142 31-183 (345)
15 4ery_A WD repeat-containing pr 99.9 2.2E-20 7.4E-25 139.7 17.5 142 1-146 38-186 (312)
16 1vyh_C Platelet-activating fac 99.9 1.6E-20 5.6E-25 146.5 16.6 141 1-146 207-375 (410)
17 1got_B GT-beta; complex (GTP-b 99.9 2.1E-20 7.1E-25 142.2 16.6 143 1-146 70-221 (340)
18 4g56_B MGC81050 protein; prote 99.9 9.7E-21 3.3E-25 145.5 14.1 138 1-141 197-344 (357)
19 2pm7_B Protein transport prote 99.9 5.1E-20 1.7E-24 137.7 17.5 138 1-141 70-239 (297)
20 2w18_A PALB2, fancn, partner a 99.9 1.3E-20 4.6E-25 145.3 14.3 133 1-138 196-355 (356)
21 2xzm_R RACK1; ribosome, transl 99.9 3.3E-20 1.1E-24 141.1 16.1 135 1-140 91-244 (343)
22 2pbi_B Guanine nucleotide-bind 99.8 7.2E-20 2.5E-24 140.4 17.6 142 1-146 169-321 (354)
23 2pbi_B Guanine nucleotide-bind 99.8 1E-19 3.5E-24 139.5 18.4 115 29-145 153-276 (354)
24 3frx_A Guanine nucleotide-bind 99.8 4.4E-20 1.5E-24 139.5 15.5 143 1-146 33-191 (319)
25 4e54_B DNA damage-binding prot 99.8 2.2E-20 7.6E-25 146.3 14.1 139 1-143 135-285 (435)
26 4aez_A CDC20, WD repeat-contai 99.8 1.1E-19 3.8E-24 140.7 17.6 143 1-146 106-254 (401)
27 2j04_B YDR362CP, TAU91; beta p 99.8 1.3E-20 4.5E-25 152.5 12.5 137 1-140 280-428 (524)
28 4ery_A WD repeat-containing pr 99.8 1.7E-19 5.7E-24 134.8 17.3 142 1-146 80-229 (312)
29 3fm0_A Protein CIAO1; WDR39,SG 99.8 8.5E-20 2.9E-24 139.2 15.9 137 1-138 76-223 (345)
30 1nr0_A Actin interacting prote 99.8 6.8E-20 2.3E-24 149.5 16.0 142 1-146 74-227 (611)
31 1nr0_A Actin interacting prote 99.8 1.5E-19 5.2E-24 147.5 17.7 142 1-145 205-360 (611)
32 4gga_A P55CDC, cell division c 99.8 1.6E-19 5.6E-24 140.7 17.1 138 1-142 119-263 (420)
33 2pm7_B Protein transport prote 99.8 1.6E-19 5.5E-24 135.0 16.4 139 1-142 24-191 (297)
34 4g56_B MGC81050 protein; prote 99.8 7.2E-20 2.5E-24 140.6 14.6 141 1-146 154-307 (357)
35 2xzm_R RACK1; ribosome, transl 99.8 2.8E-19 9.6E-24 136.0 17.2 136 1-139 42-202 (343)
36 2hes_X YDR267CP; beta-propelle 99.8 3.3E-19 1.1E-23 135.2 16.9 140 1-141 73-231 (330)
37 3f3f_A Nucleoporin SEH1; struc 99.8 4.3E-19 1.5E-23 131.8 16.8 58 1-59 74-141 (351)
38 4h5i_A Guanine nucleotide-exch 99.8 3.7E-20 1.3E-24 142.7 11.0 102 1-140 234-343 (365)
39 3lrv_A PRE-mRNA-splicing facto 99.8 4.7E-20 1.6E-24 140.1 11.3 106 1-145 142-249 (343)
40 3vl1_A 26S proteasome regulato 99.8 9.2E-20 3.1E-24 140.6 13.0 107 1-146 112-218 (420)
41 2ymu_A WD-40 repeat protein; u 99.8 2.6E-19 8.9E-24 143.3 16.0 131 1-137 441-577 (577)
42 4e54_B DNA damage-binding prot 99.8 3.3E-20 1.1E-24 145.4 9.9 140 1-145 180-332 (435)
43 3iz6_a 40S ribosomal protein R 99.8 1.4E-19 4.7E-24 139.7 13.2 108 1-146 173-286 (380)
44 4h5i_A Guanine nucleotide-exch 99.8 5.2E-19 1.8E-23 136.3 16.0 139 2-146 151-306 (365)
45 3dm0_A Maltose-binding peripla 99.8 3.5E-19 1.2E-23 146.8 16.0 140 1-146 445-598 (694)
46 3bg1_A Protein SEC13 homolog; 99.8 1.2E-19 4E-24 137.0 11.8 137 1-141 28-199 (316)
47 3v7d_B Cell division control p 99.8 9.1E-19 3.1E-23 137.1 16.8 140 1-146 283-427 (464)
48 3bg1_A Protein SEC13 homolog; 99.8 1.8E-19 6.3E-24 135.9 12.4 137 1-140 74-247 (316)
49 3vu4_A KMHSV2; beta-propeller 99.8 1.8E-19 6.1E-24 138.2 12.2 100 4-141 155-272 (355)
50 1erj_A Transcriptional repress 99.8 1.1E-18 3.9E-23 135.1 16.9 140 1-146 180-347 (393)
51 3dwl_C Actin-related protein 2 99.8 1.7E-19 5.8E-24 137.5 11.9 139 1-143 70-239 (377)
52 1erj_A Transcriptional repress 99.8 8.4E-19 2.9E-23 135.8 15.9 137 1-141 138-288 (393)
53 3dm0_A Maltose-binding peripla 99.8 8.3E-19 2.8E-23 144.6 16.7 143 1-146 398-556 (694)
54 2aq5_A Coronin-1A; WD40 repeat 99.8 6.1E-19 2.1E-23 136.3 14.9 142 2-146 51-213 (402)
55 4aow_A Guanine nucleotide-bind 99.8 2.9E-18 9.9E-23 128.3 17.5 143 1-146 54-252 (340)
56 3i2n_A WD repeat-containing pr 99.8 9.2E-19 3.2E-23 131.6 14.5 138 1-144 183-357 (357)
57 3ei3_B DNA damage-binding prot 99.8 1.7E-18 5.9E-23 132.5 16.3 139 1-145 134-287 (383)
58 4gq1_A NUP37; propeller, trans 99.8 1.2E-19 4E-24 140.9 9.3 107 1-144 104-222 (393)
59 3zwl_B Eukaryotic translation 99.8 1.7E-18 6E-23 130.2 15.4 141 1-145 190-351 (369)
60 2ymu_A WD-40 repeat protein; u 99.8 2.1E-18 7.3E-23 138.0 16.4 139 1-146 400-544 (577)
61 3gre_A Serine/threonine-protei 99.8 3.3E-19 1.1E-23 138.6 11.3 145 1-146 79-251 (437)
62 3vl1_A 26S proteasome regulato 99.8 1.4E-18 4.9E-23 133.9 14.7 138 1-143 154-325 (420)
63 2oaj_A Protein SNI1; WD40 repe 99.8 5.9E-19 2E-23 150.3 13.1 144 1-146 450-670 (902)
64 3dw8_B Serine/threonine-protei 99.8 7.6E-19 2.6E-23 136.3 12.6 140 1-144 192-377 (447)
65 3ei3_B DNA damage-binding prot 99.8 2E-18 6.9E-23 132.1 14.7 136 1-140 89-236 (383)
66 2oaj_A Protein SNI1; WD40 repe 99.8 1.6E-18 5.3E-23 147.8 15.5 139 1-145 72-247 (902)
67 3v7d_B Cell division control p 99.8 4E-18 1.4E-22 133.5 16.7 143 1-147 176-348 (464)
68 1yfq_A Cell cycle arrest prote 99.8 1.9E-18 6.4E-23 129.6 14.0 117 1-147 163-289 (342)
69 3sfz_A APAF-1, apoptotic pepti 99.8 3.1E-18 1.1E-22 148.1 17.3 140 1-145 630-779 (1249)
70 3dwl_C Actin-related protein 2 99.8 4.2E-19 1.4E-23 135.3 10.5 136 1-139 26-176 (377)
71 3jrp_A Fusion protein of prote 99.8 5.8E-18 2E-22 128.0 16.6 140 1-141 72-241 (379)
72 2j04_B YDR362CP, TAU91; beta p 99.8 2.3E-18 7.8E-23 139.3 14.9 141 1-146 228-392 (524)
73 3mmy_A MRNA export factor; mRN 99.8 5E-18 1.7E-22 127.6 15.6 141 1-147 101-311 (368)
74 4a11_B DNA excision repair pro 99.8 3.4E-18 1.2E-22 130.4 14.4 143 1-145 202-370 (408)
75 1sq9_A Antiviral protein SKI8; 99.8 2.6E-18 9E-23 131.4 13.7 143 1-147 141-329 (397)
76 3mmy_A MRNA export factor; mRN 99.8 1.1E-18 3.7E-23 131.3 11.3 107 1-146 57-166 (368)
77 1sq9_A Antiviral protein SKI8; 99.8 7.7E-18 2.6E-22 128.8 16.0 139 1-142 200-397 (397)
78 3f3f_A Nucleoporin SEH1; struc 99.8 1.3E-18 4.6E-23 129.2 11.1 109 1-145 26-148 (351)
79 1gxr_A ESG1, transducin-like e 99.8 1.5E-17 5.1E-22 123.8 16.4 140 1-145 156-301 (337)
80 1gxr_A ESG1, transducin-like e 99.8 2.7E-17 9.2E-22 122.5 17.8 142 1-144 112-259 (337)
81 3odt_A Protein DOA1; ubiquitin 99.8 1.2E-17 4E-22 123.4 15.6 137 1-145 158-301 (313)
82 1k8k_C P40, ARP2/3 complex 41 99.8 4.3E-18 1.5E-22 128.8 13.2 146 1-146 67-239 (372)
83 3k26_A Polycomb protein EED; W 99.8 1.2E-18 4.3E-23 131.1 10.0 105 1-144 88-196 (366)
84 3lrv_A PRE-mRNA-splicing facto 99.8 6.2E-18 2.1E-22 128.4 13.3 107 1-144 88-205 (343)
85 4aez_A CDC20, WD repeat-contai 99.8 2.3E-17 7.8E-22 127.7 16.7 141 1-144 189-340 (401)
86 2aq5_A Coronin-1A; WD40 repeat 99.8 1E-17 3.4E-22 129.4 14.5 140 1-143 97-257 (402)
87 4gga_A P55CDC, cell division c 99.8 4.1E-18 1.4E-22 132.7 12.1 100 3-142 296-397 (420)
88 1r5m_A SIR4-interacting protei 99.8 1.2E-17 4E-22 127.9 14.2 137 1-142 220-363 (425)
89 2vdu_B TRNA (guanine-N(7)-)-me 99.8 1.2E-17 4E-22 131.2 14.4 141 2-146 119-277 (450)
90 2pm9_A Protein WEB1, protein t 99.8 5E-18 1.7E-22 130.3 11.9 106 1-143 230-340 (416)
91 1pgu_A Actin interacting prote 99.8 5.8E-18 2E-22 135.7 12.5 135 1-140 459-614 (615)
92 3zwl_B Eukaryotic translation 99.8 7.2E-17 2.5E-21 121.3 17.5 140 1-146 47-213 (369)
93 3odt_A Protein DOA1; ubiquitin 99.8 4.2E-17 1.4E-21 120.4 15.8 137 1-140 32-174 (313)
94 4ggc_A P55CDC, cell division c 99.8 8.2E-18 2.8E-22 124.7 12.0 101 2-142 215-317 (318)
95 3mkq_A Coatomer beta'-subunit; 99.8 2.2E-17 7.5E-22 136.9 15.7 140 1-144 28-176 (814)
96 3gre_A Serine/threonine-protei 99.8 5.2E-18 1.8E-22 131.9 11.2 108 1-146 185-298 (437)
97 2pm9_A Protein WEB1, protein t 99.8 9.3E-18 3.2E-22 128.8 12.4 137 5-146 42-203 (416)
98 3jrp_A Fusion protein of prote 99.8 1.9E-17 6.6E-22 125.1 13.8 139 1-142 26-193 (379)
99 2xyi_A Probable histone-bindin 99.7 5.2E-17 1.8E-21 127.1 16.2 138 1-141 247-411 (430)
100 3i2n_A WD repeat-containing pr 99.7 3E-17 1E-21 123.3 13.8 139 1-144 83-247 (357)
101 1k8k_C P40, ARP2/3 complex 41 99.7 4.6E-17 1.6E-21 123.1 14.9 136 1-139 23-172 (372)
102 1p22_A F-BOX/WD-repeat protein 99.7 9.7E-17 3.3E-21 125.3 16.7 138 1-146 146-291 (435)
103 1r5m_A SIR4-interacting protei 99.7 2.9E-17 1E-21 125.6 12.2 108 1-146 61-186 (425)
104 3k26_A Polycomb protein EED; W 99.7 3E-17 1E-21 123.5 12.0 108 1-146 37-153 (366)
105 3jro_A Fusion protein of prote 99.7 1.2E-16 4.2E-21 133.4 16.6 138 1-141 70-239 (753)
106 3dw8_B Serine/threonine-protei 99.7 5.6E-17 1.9E-21 125.7 13.5 139 1-143 43-261 (447)
107 3mkq_A Coatomer beta'-subunit; 99.7 1.1E-16 3.8E-21 132.7 15.6 143 1-146 112-265 (814)
108 2ovr_B FBW7, F-BOX/WD repeat p 99.7 2.4E-16 8.3E-21 123.1 16.3 138 1-146 132-274 (445)
109 2ovr_B FBW7, F-BOX/WD repeat p 99.7 3.2E-16 1.1E-20 122.5 16.0 140 1-146 212-354 (445)
110 2xyi_A Probable histone-bindin 99.7 3.9E-16 1.3E-20 122.1 16.4 137 1-140 197-353 (430)
111 1pgu_A Actin interacting prote 99.7 9.8E-17 3.3E-21 128.6 13.2 142 1-147 81-245 (615)
112 4a11_B DNA excision repair pro 99.7 3.8E-16 1.3E-20 119.0 15.7 139 1-144 115-280 (408)
113 1p22_A F-BOX/WD-repeat protein 99.7 3.7E-16 1.3E-20 122.0 14.8 136 1-142 226-367 (435)
114 2j04_A TAU60, YPL007P, hypothe 99.7 8.7E-17 3E-21 130.9 10.7 103 1-142 100-213 (588)
115 4gq1_A NUP37; propeller, trans 99.7 1E-16 3.4E-21 124.4 10.5 125 1-145 159-291 (393)
116 3jro_A Fusion protein of prote 99.7 3.3E-16 1.1E-20 130.8 14.0 138 1-141 24-190 (753)
117 2oit_A Nucleoporin 214KDA; NH2 99.7 3.8E-17 1.3E-21 129.1 7.5 100 3-139 113-222 (434)
118 2w18_A PALB2, fancn, partner a 99.7 1.7E-15 5.7E-20 116.9 15.5 137 6-147 155-321 (356)
119 1yfq_A Cell cycle arrest prote 99.7 3.7E-16 1.3E-20 117.0 10.8 133 1-141 72-226 (342)
120 3sfz_A APAF-1, apoptotic pepti 99.7 7.8E-16 2.7E-20 133.2 14.0 140 1-146 1018-1164(1249)
121 3vu4_A KMHSV2; beta-propeller 99.7 1.5E-15 5.2E-20 116.3 14.1 136 2-147 75-234 (355)
122 1l0q_A Surface layer protein; 99.7 6.4E-15 2.2E-19 112.6 17.2 141 1-146 5-153 (391)
123 2vdu_B TRNA (guanine-N(7)-)-me 99.6 5.2E-15 1.8E-19 116.1 13.4 127 1-141 213-342 (450)
124 2j04_A TAU60, YPL007P, hypothe 99.6 8.4E-15 2.9E-19 119.3 14.1 131 1-139 144-296 (588)
125 1l0q_A Surface layer protein; 99.6 1.3E-13 4.3E-18 105.4 17.8 140 2-146 48-195 (391)
126 3bws_A Protein LP49; two-domai 99.5 6.4E-14 2.2E-18 108.3 11.5 107 2-146 138-249 (433)
127 3bws_A Protein LP49; two-domai 99.5 5.9E-13 2E-17 102.9 16.6 142 1-146 184-340 (433)
128 1nir_A Nitrite reductase; hemo 99.5 7E-13 2.4E-17 107.4 12.8 105 1-146 152-263 (543)
129 2oit_A Nucleoporin 214KDA; NH2 99.4 8.9E-13 3E-17 104.0 11.4 106 1-141 165-279 (434)
130 2hqs_A Protein TOLB; TOLB, PAL 99.4 3.2E-12 1.1E-16 99.9 14.2 139 1-143 193-347 (415)
131 2hqs_A Protein TOLB; TOLB, PAL 99.4 5.1E-12 1.7E-16 98.8 12.7 95 8-143 159-259 (415)
132 3u4y_A Uncharacterized protein 99.4 1.4E-11 4.8E-16 92.0 13.6 105 2-146 14-123 (331)
133 1nir_A Nitrite reductase; hemo 99.4 2.1E-11 7.3E-16 98.7 15.2 141 1-146 193-361 (543)
134 1pby_B Quinohemoprotein amine 99.4 1.5E-11 5.1E-16 91.3 12.7 113 1-146 4-130 (337)
135 1jmx_B Amine dehydrogenase; ox 99.3 1.4E-11 4.7E-16 92.1 11.7 109 1-142 14-136 (349)
136 1ri6_A Putative isomerase YBHE 99.3 1.1E-11 3.8E-16 92.2 10.3 100 2-139 9-114 (343)
137 3vgz_A Uncharacterized protein 99.3 9.5E-11 3.2E-15 87.8 14.6 107 2-146 105-221 (353)
138 1pby_B Quinohemoprotein amine 99.3 3.8E-11 1.3E-15 89.1 11.8 97 9-146 220-316 (337)
139 3hfq_A Uncharacterized protein 99.3 6.9E-10 2.3E-14 83.6 17.7 143 2-144 156-323 (347)
140 3u4y_A Uncharacterized protein 99.3 2.2E-10 7.6E-15 85.4 14.6 138 3-143 57-210 (331)
141 3vgz_A Uncharacterized protein 99.2 2.8E-10 9.7E-15 85.1 14.6 106 1-146 199-309 (353)
142 1k32_A Tricorn protease; prote 99.2 7.5E-11 2.6E-15 101.4 12.9 102 2-143 352-464 (1045)
143 2ojh_A Uncharacterized protein 99.2 6.2E-11 2.1E-15 85.9 10.6 95 4-138 18-115 (297)
144 2ecf_A Dipeptidyl peptidase IV 99.2 4.3E-11 1.5E-15 98.7 10.1 104 1-144 51-185 (741)
145 2ojh_A Uncharacterized protein 99.2 6.6E-11 2.3E-15 85.8 9.8 104 3-143 146-261 (297)
146 3o4h_A Acylamino-acid-releasin 99.2 4.3E-11 1.5E-15 96.5 9.6 108 2-144 165-278 (582)
147 1ri6_A Putative isomerase YBHE 99.2 7.7E-11 2.6E-15 87.6 10.0 105 1-143 52-164 (343)
148 1z68_A Fibroblast activation p 99.2 2.5E-11 8.6E-16 99.9 7.2 100 2-144 30-143 (719)
149 1xfd_A DIP, dipeptidyl aminope 99.2 2.8E-11 9.6E-16 99.4 6.9 103 4-144 33-147 (723)
150 3o4h_A Acylamino-acid-releasin 99.2 1.4E-10 4.7E-15 93.6 10.1 96 6-144 130-231 (582)
151 3scy_A Hypothetical bacterial 99.2 4.4E-09 1.5E-13 79.6 17.7 140 3-144 172-343 (361)
152 1jmx_B Amine dehydrogenase; ox 99.1 4.4E-10 1.5E-14 83.8 10.9 103 2-146 59-181 (349)
153 1xfd_A DIP, dipeptidyl aminope 99.1 1.7E-10 5.8E-15 94.7 8.3 59 7-70 90-150 (723)
154 2z3z_A Dipeptidyl aminopeptida 99.1 5.5E-10 1.9E-14 91.7 11.3 106 6-144 233-347 (706)
155 2ecf_A Dipeptidyl peptidase IV 99.1 1E-09 3.4E-14 90.5 10.8 59 2-66 124-184 (741)
156 2z3z_A Dipeptidyl aminopeptida 99.1 5.3E-10 1.8E-14 91.7 9.0 53 5-63 98-150 (706)
157 3no2_A Uncharacterized protein 99.0 7.2E-09 2.5E-13 77.0 13.8 140 1-147 8-161 (276)
158 3hfq_A Uncharacterized protein 99.0 1.2E-09 4.1E-14 82.2 9.4 108 7-142 62-174 (347)
159 1k32_A Tricorn protease; prote 99.0 1.2E-09 4.2E-14 93.9 10.0 101 1-141 393-503 (1045)
160 1z68_A Fibroblast activation p 99.0 1.2E-09 4.2E-14 89.8 8.4 53 7-66 89-142 (719)
161 3scy_A Hypothetical bacterial 99.0 7.4E-09 2.5E-13 78.4 11.7 105 5-143 117-245 (361)
162 4a5s_A Dipeptidyl peptidase 4 99.0 1.7E-09 5.7E-14 90.0 8.8 98 7-144 35-145 (740)
163 2oiz_A Aromatic amine dehydrog 99.0 5.8E-09 2E-13 80.1 11.2 105 6-146 29-146 (361)
164 1qks_A Cytochrome CD1 nitrite 98.9 2E-08 6.9E-13 81.9 12.7 104 2-146 171-281 (567)
165 1jof_A Carboxy-CIS,CIS-muconat 98.9 2.5E-08 8.6E-13 76.0 12.4 61 6-66 165-229 (365)
166 1jof_A Carboxy-CIS,CIS-muconat 98.9 3.4E-08 1.2E-12 75.3 12.6 102 6-142 117-228 (365)
167 2oiz_A Aromatic amine dehydrog 98.9 5.1E-08 1.7E-12 74.8 13.0 103 4-146 217-342 (361)
168 3azo_A Aminopeptidase; POP fam 98.8 3.2E-08 1.1E-12 80.6 10.6 97 8-143 161-277 (662)
169 1q7f_A NHL, brain tumor CG1071 98.8 1.1E-07 3.7E-12 69.7 12.5 103 2-143 179-283 (286)
170 3fvz_A Peptidyl-glycine alpha- 98.8 2E-07 6.8E-12 70.2 13.3 117 2-146 106-233 (329)
171 3pe7_A Oligogalacturonate lyas 98.8 2.4E-08 8.3E-13 75.8 8.1 96 12-144 14-115 (388)
172 2gop_A Trilobed protease; beta 98.8 7.9E-08 2.7E-12 72.0 10.7 93 7-143 42-164 (347)
173 3dsm_A Uncharacterized protein 98.7 1E-06 3.5E-11 66.4 15.4 137 3-146 59-218 (328)
174 3e5z_A Putative gluconolactona 98.7 2.2E-06 7.4E-11 63.1 16.5 134 2-142 44-205 (296)
175 1xip_A Nucleoporin NUP159; bet 98.7 1.5E-07 5.2E-12 73.5 10.2 94 1-142 100-193 (388)
176 2hz6_A Endoplasmic reticulum t 98.7 3.1E-09 1E-13 82.0 0.2 140 1-146 12-155 (369)
177 1q7f_A NHL, brain tumor CG1071 98.7 3.9E-07 1.3E-11 66.6 11.6 104 3-145 137-242 (286)
178 3sjl_D Methylamine dehydrogena 98.6 4.9E-07 1.7E-11 70.6 11.9 104 7-146 58-175 (386)
179 3pe7_A Oligogalacturonate lyas 98.6 5E-07 1.7E-11 68.5 11.3 66 2-71 51-119 (388)
180 3fvz_A Peptidyl-glycine alpha- 98.6 1.1E-07 3.9E-12 71.6 7.2 105 2-141 212-323 (329)
181 3azo_A Aminopeptidase; POP fam 98.6 2.2E-07 7.4E-12 75.7 9.1 95 7-141 101-228 (662)
182 4a5s_A Dipeptidyl peptidase 4 98.5 8.2E-08 2.8E-12 79.8 6.0 78 33-144 19-105 (740)
183 2bkl_A Prolyl endopeptidase; m 98.5 1.8E-07 6.2E-12 77.2 6.9 100 4-141 143-262 (695)
184 2xdw_A Prolyl endopeptidase; a 98.5 3.7E-07 1.3E-11 75.5 8.0 94 9-140 152-268 (710)
185 2hz6_A Endoplasmic reticulum t 98.5 1.7E-07 5.8E-12 72.2 5.6 101 1-146 95-198 (369)
186 3no2_A Uncharacterized protein 98.5 1.3E-05 4.5E-10 59.3 15.6 138 5-147 53-202 (276)
187 2xdw_A Prolyl endopeptidase; a 98.5 2.2E-06 7.4E-11 70.9 12.1 74 31-142 125-219 (710)
188 3dsm_A Uncharacterized protein 98.5 1.8E-06 6.2E-11 65.1 10.8 98 6-144 150-257 (328)
189 3c75_H MADH, methylamine dehyd 98.5 3E-06 1E-10 67.0 12.3 103 8-146 99-215 (426)
190 2dg1_A DRP35, lactonase; beta 98.4 5E-06 1.7E-10 61.9 12.8 61 2-66 60-124 (333)
191 1yiq_A Quinohemoprotein alcoho 98.4 3.8E-06 1.3E-10 69.8 12.9 32 116-147 481-512 (689)
192 3c5m_A Oligogalacturonate lyas 98.4 3.2E-06 1.1E-10 63.8 11.5 94 8-143 216-332 (396)
193 1kb0_A Quinohemoprotein alcoho 98.4 5.4E-06 1.9E-10 68.8 13.4 32 116-147 483-514 (677)
194 2mad_H Methylamine dehydrogena 98.4 6.1E-06 2.1E-10 63.8 12.5 101 9-146 48-162 (373)
195 3c5m_A Oligogalacturonate lyas 98.4 4E-07 1.4E-11 68.8 5.5 101 6-143 166-276 (396)
196 1rwi_B Serine/threonine-protei 98.4 2.8E-06 9.5E-11 61.3 9.6 102 4-145 167-269 (270)
197 1qks_A Cytochrome CD1 nitrite 98.4 2.7E-05 9.3E-10 63.5 16.2 140 1-145 211-378 (567)
198 2dg1_A DRP35, lactonase; beta 98.4 2.4E-06 8.2E-11 63.6 9.1 97 5-143 24-124 (333)
199 2mad_H Methylamine dehydrogena 98.3 1.7E-05 5.8E-10 61.3 13.4 103 6-146 232-356 (373)
200 1rwi_B Serine/threonine-protei 98.3 1.6E-05 5.3E-10 57.2 11.7 102 3-143 82-183 (270)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 98.3 1.5E-05 5.1E-10 58.5 11.8 98 5-140 195-299 (314)
202 2bkl_A Prolyl endopeptidase; m 98.3 2.1E-06 7.3E-11 70.8 7.7 75 31-142 121-213 (695)
203 1mda_H Methylamine dehydrogena 98.3 8.3E-06 2.8E-10 63.2 10.4 58 9-72 47-114 (368)
204 1xip_A Nucleoporin NUP159; bet 98.2 1E-05 3.5E-10 63.2 9.8 96 2-143 53-158 (388)
205 2gop_A Trilobed protease; beta 98.2 2.3E-05 7.7E-10 58.4 11.0 39 9-51 86-124 (347)
206 3e5z_A Putative gluconolactona 98.1 1.9E-05 6.4E-10 58.0 9.2 73 32-143 29-102 (296)
207 3c75_H MADH, methylamine dehyd 98.0 3.4E-05 1.1E-09 61.0 9.7 104 5-146 283-408 (426)
208 1yr2_A Prolyl oligopeptidase; 98.0 9.7E-06 3.3E-10 67.4 6.7 95 8-141 189-304 (741)
209 3sjl_D Methylamine dehydrogena 98.0 8.3E-05 2.8E-09 58.0 10.9 106 3-146 242-369 (386)
210 3g4e_A Regucalcin; six bladed 97.9 0.0015 5.3E-08 48.0 16.8 56 3-66 30-85 (297)
211 3g4e_A Regucalcin; six bladed 97.9 0.00022 7.4E-09 52.6 11.9 82 33-146 151-235 (297)
212 1mda_H Methylamine dehydrogena 97.9 6.8E-05 2.3E-09 58.0 9.3 74 36-147 269-353 (368)
213 2ad6_A Methanol dehydrogenase 97.9 0.00031 1.1E-08 57.2 12.8 31 117-147 471-501 (571)
214 3nok_A Glutaminyl cyclase; bet 97.8 0.00023 7.9E-09 52.8 10.8 101 2-146 69-170 (268)
215 2iwa_A Glutamine cyclotransfer 97.8 0.0002 6.8E-09 53.1 10.5 105 5-146 83-187 (266)
216 2ece_A 462AA long hypothetical 97.8 0.00023 8E-09 56.6 11.4 110 2-146 100-243 (462)
217 2z2n_A Virginiamycin B lyase; 97.8 0.00048 1.7E-08 49.7 12.3 93 6-138 34-127 (299)
218 1pjx_A Dfpase, DIISOPROPYLFLUO 97.8 0.0021 7E-08 46.9 15.8 135 3-144 87-260 (314)
219 3nok_A Glutaminyl cyclase; bet 97.8 0.0003 1E-08 52.2 11.1 104 5-146 113-216 (268)
220 2z2n_A Virginiamycin B lyase; 97.8 0.00067 2.3E-08 48.9 12.9 97 5-142 117-214 (299)
221 1flg_A Protein (quinoprotein e 97.8 0.00057 1.9E-08 55.8 13.6 29 119-147 495-523 (582)
222 3nol_A Glutamine cyclotransfer 97.8 0.00055 1.9E-08 50.7 12.0 100 3-145 58-160 (262)
223 3hrp_A Uncharacterized protein 97.7 0.00041 1.4E-08 54.0 11.5 103 3-142 147-251 (409)
224 3hrp_A Uncharacterized protein 97.7 0.00072 2.5E-08 52.6 12.6 114 3-143 235-357 (409)
225 2ghs_A AGR_C_1268P; regucalcin 97.7 0.0015 5E-08 48.9 13.4 96 3-139 105-209 (326)
226 2iwa_A Glutamine cyclotransfer 97.7 0.0015 5E-08 48.4 13.1 98 7-146 43-141 (266)
227 3nol_A Glutamine cyclotransfer 97.7 0.00038 1.3E-08 51.5 9.7 103 6-146 105-207 (262)
228 2qe8_A Uncharacterized protein 97.7 0.00072 2.5E-08 50.9 11.4 74 33-142 197-280 (343)
229 1yr2_A Prolyl oligopeptidase; 97.7 0.00023 7.8E-09 59.1 9.3 73 31-142 163-254 (741)
230 3dr2_A Exported gluconolactona 97.6 0.0008 2.8E-08 49.7 11.3 55 2-62 61-115 (305)
231 1kv9_A Type II quinohemoprotei 97.6 0.00096 3.3E-08 55.2 12.8 32 116-147 464-495 (668)
232 3mbr_X Glutamine cyclotransfer 97.6 0.0014 4.7E-08 48.0 11.7 104 5-146 82-185 (243)
233 3mbr_X Glutamine cyclotransfer 97.6 0.0026 8.8E-08 46.6 13.1 96 8-146 43-139 (243)
234 3q7m_A Lipoprotein YFGL, BAMB; 97.6 0.0025 8.7E-08 48.1 13.7 104 2-146 57-168 (376)
235 1kb0_A Quinohemoprotein alcoho 97.6 0.0011 3.7E-08 55.0 12.0 111 7-146 189-352 (677)
236 2qc5_A Streptogramin B lactona 97.5 0.0023 7.8E-08 46.1 12.4 53 5-62 38-91 (300)
237 2qc5_A Streptogramin B lactona 97.5 0.0039 1.3E-07 44.8 13.2 52 6-62 81-133 (300)
238 3q7m_A Lipoprotein YFGL, BAMB; 97.5 0.0033 1.1E-07 47.5 12.9 108 1-146 106-213 (376)
239 3iuj_A Prolyl endopeptidase; h 97.4 0.00042 1.4E-08 57.3 8.1 45 5-53 152-196 (693)
240 1w6s_A Methanol dehydrogenase 97.4 0.0029 1E-07 51.9 12.8 30 118-147 481-510 (599)
241 2ghs_A AGR_C_1268P; regucalcin 97.4 0.0024 8.1E-08 47.8 11.2 57 2-66 65-121 (326)
242 3dr2_A Exported gluconolactona 97.3 0.0016 5.5E-08 48.0 9.0 27 115-141 193-225 (305)
243 1yiq_A Quinohemoprotein alcoho 97.3 0.0016 5.4E-08 54.1 9.8 138 1-147 124-291 (689)
244 3iuj_A Prolyl endopeptidase; h 97.3 0.001 3.4E-08 55.0 8.2 72 31-142 129-219 (693)
245 2ece_A 462AA long hypothetical 97.2 0.0059 2E-07 48.6 11.9 54 7-61 227-289 (462)
246 3hxj_A Pyrrolo-quinoline quino 97.2 0.0051 1.8E-07 45.0 10.7 135 2-146 111-249 (330)
247 1fwx_A Nitrous oxide reductase 97.0 0.0015 5E-08 53.6 6.3 105 8-140 254-361 (595)
248 1fwx_A Nitrous oxide reductase 96.9 0.0028 9.6E-08 52.0 7.3 58 2-61 293-361 (595)
249 1kv9_A Type II quinohemoprotei 96.8 0.022 7.7E-07 47.0 12.7 83 35-145 234-338 (668)
250 2qe8_A Uncharacterized protein 96.8 0.0055 1.9E-07 46.0 8.4 83 31-145 67-159 (343)
251 2p9w_A MAL S 1 allergenic prot 96.8 0.021 7.2E-07 43.6 11.4 102 7-141 99-216 (334)
252 2xe4_A Oligopeptidase B; hydro 96.8 0.0052 1.8E-07 51.4 8.7 53 8-64 201-257 (751)
253 2fp8_A Strictosidine synthase; 96.5 0.032 1.1E-06 41.2 10.3 25 116-140 191-216 (322)
254 3hxj_A Pyrrolo-quinoline quino 96.4 0.038 1.3E-06 40.3 10.3 134 2-146 151-289 (330)
255 1w6s_A Methanol dehydrogenase 96.4 0.041 1.4E-06 45.1 11.2 83 35-146 245-348 (599)
256 1k3i_A Galactose oxidase precu 96.3 0.035 1.2E-06 45.5 10.2 99 9-143 220-326 (656)
257 2ad6_A Methanol dehydrogenase 96.1 0.078 2.7E-06 43.0 11.3 83 35-146 239-341 (571)
258 1flg_A Protein (quinoprotein e 96.1 0.13 4.4E-06 41.8 12.5 28 119-146 331-361 (582)
259 2fp8_A Strictosidine synthase; 95.9 0.2 6.7E-06 36.9 12.1 58 2-64 34-111 (322)
260 2xe4_A Oligopeptidase B; hydro 95.9 0.05 1.7E-06 45.4 9.4 31 32-64 175-211 (751)
261 2p4o_A Hypothetical protein; p 95.6 0.27 9.3E-06 36.0 11.8 57 6-66 51-107 (306)
262 2p4o_A Hypothetical protein; p 95.1 0.19 6.3E-06 36.9 9.3 29 32-62 33-61 (306)
263 1npe_A Nidogen, entactin; glyc 95.1 0.59 2E-05 33.2 13.0 50 8-62 146-197 (267)
264 3tc9_A Hypothetical hydrolase; 95.1 0.69 2.4E-05 36.0 12.9 40 8-50 159-198 (430)
265 2be1_A Serine/threonine-protei 94.8 0.034 1.2E-06 42.5 4.7 116 1-147 13-137 (339)
266 1npe_A Nidogen, entactin; glyc 94.8 0.72 2.5E-05 32.7 13.9 32 115-146 212-244 (267)
267 4hw6_A Hypothetical protein, I 94.7 0.71 2.4E-05 36.0 12.2 38 8-48 162-199 (433)
268 3pbp_A Nucleoporin NUP82; beta 94.5 0.77 2.6E-05 36.3 11.8 113 5-140 38-158 (452)
269 3sre_A PON1, serum paraoxonase 94.5 0.54 1.9E-05 36.0 10.8 28 113-140 224-252 (355)
270 4hw6_A Hypothetical protein, I 93.6 1.2 4.2E-05 34.6 11.4 59 6-64 248-307 (433)
271 1k3i_A Galactose oxidase precu 93.5 0.45 1.6E-05 38.9 9.1 29 35-65 190-230 (656)
272 3amr_A 3-phytase; beta-propell 93.4 2 6.9E-05 32.9 12.0 56 3-62 148-209 (355)
273 4a2l_A BT_4663, two-component 93.2 2.1 7.3E-05 35.5 13.0 59 3-65 372-438 (795)
274 3qqz_A Putative uncharacterize 92.4 1.2 4.1E-05 32.4 9.1 37 31-70 27-64 (255)
275 3tc9_A Hypothetical hydrolase; 92.1 0.64 2.2E-05 36.1 7.8 71 33-139 228-300 (430)
276 1tl2_A L10, protein (tachylect 91.7 0.27 9.2E-06 35.6 4.8 28 32-63 42-69 (236)
277 3qqz_A Putative uncharacterize 90.9 3.4 0.00012 29.9 11.3 57 3-61 44-100 (255)
278 3a9g_A Putative uncharacterize 90.7 3.8 0.00013 30.8 10.8 47 2-49 43-94 (354)
279 3kya_A Putative phosphatase; s 90.7 2.1 7.1E-05 34.3 9.6 32 32-63 311-343 (496)
280 3kya_A Putative phosphatase; s 89.9 6.5 0.00022 31.4 13.0 24 116-139 253-277 (496)
281 4gq2_M Nucleoporin NUP120; bet 89.8 1.4 4.9E-05 37.9 8.5 34 113-146 239-272 (950)
282 3v9f_A Two-component system se 89.2 4.1 0.00014 33.7 10.7 57 3-65 422-480 (781)
283 4a2l_A BT_4663, two-component 88.9 6.6 0.00023 32.5 11.7 57 2-64 421-481 (795)
284 1ijq_A LDL receptor, low-densi 88.5 5.8 0.0002 29.1 13.7 52 6-61 97-150 (316)
285 3v64_C Agrin; beta propeller, 88.3 6.5 0.00022 29.3 12.2 49 6-56 136-186 (349)
286 2ism_A Putative oxidoreductase 87.9 7 0.00024 29.2 10.6 47 2-50 45-97 (352)
287 1n7d_A LDL receptor, low-densi 87.8 3.2 0.00011 34.4 9.0 52 6-61 473-526 (699)
288 3pbp_A Nucleoporin NUP82; beta 87.7 2.2 7.4E-05 33.8 7.5 31 31-61 125-158 (452)
289 3ei3_A DNA damage-binding prot 86.7 9.7 0.00033 33.6 11.7 52 8-60 807-872 (1158)
290 3v9f_A Two-component system se 86.0 10 0.00034 31.4 11.1 56 3-64 465-525 (781)
291 3v65_B Low-density lipoprotein 85.5 10 0.00035 28.7 12.2 28 32-61 203-232 (386)
292 4fhn_B Nucleoporin NUP120; pro 84.9 1 3.5E-05 39.5 4.8 32 115-146 243-274 (1139)
293 2ism_A Putative oxidoreductase 84.9 2.9 9.9E-05 31.4 6.8 26 32-60 32-57 (352)
294 3sov_A LRP-6, low-density lipo 84.6 10 0.00035 28.0 9.8 54 6-62 11-65 (318)
295 2xbg_A YCF48-like protein; pho 82.2 12 0.0004 27.5 9.1 23 32-55 251-273 (327)
296 3sov_A LRP-6, low-density lipo 81.8 13 0.00046 27.3 13.4 52 6-61 99-152 (318)
297 3v64_C Agrin; beta propeller, 81.7 14 0.00048 27.5 12.3 28 33-62 118-146 (349)
298 1n7d_A LDL receptor, low-densi 81.3 9.2 0.00031 31.6 8.9 28 33-62 542-570 (699)
299 3zwu_A Alkaline phosphatase PH 81.1 5.6 0.00019 32.6 7.4 16 34-49 479-494 (592)
300 3amr_A 3-phytase; beta-propell 80.6 17 0.00058 27.8 11.1 53 7-59 98-160 (355)
301 2be1_A Serine/threonine-protei 80.2 2.4 8.1E-05 32.2 4.7 29 42-72 10-38 (339)
302 3p5b_L Low density lipoprotein 79.5 18 0.00063 27.5 13.1 51 7-61 180-232 (400)
303 3das_A Putative oxidoreductase 79.3 15 0.0005 27.9 8.9 17 33-49 142-158 (347)
304 3a9g_A Putative uncharacterize 78.9 14 0.00049 27.6 8.7 16 33-48 137-152 (354)
305 3f7f_A Nucleoporin NUP120; nuc 78.7 2.3 7.9E-05 35.7 4.4 29 118-146 228-256 (729)
306 3ii7_A Kelch-like protein 7; p 78.2 16 0.00055 26.1 10.2 24 120-143 247-275 (306)
307 3m0c_C LDL receptor, low-densi 78.1 30 0.001 29.2 12.4 36 32-70 472-508 (791)
308 1ijq_A LDL receptor, low-densi 78.1 17 0.0006 26.4 12.2 53 5-62 7-60 (316)
309 3sbq_A Nitrous-oxide reductase 77.1 5 0.00017 33.0 5.8 105 9-140 299-408 (638)
310 2xn4_A Kelch-like protein 2; s 76.7 18 0.0006 25.8 10.9 24 120-143 251-279 (302)
311 3sre_A PON1, serum paraoxonase 76.4 23 0.00078 26.9 12.5 58 6-63 81-150 (355)
312 2p9w_A MAL S 1 allergenic prot 75.9 11 0.00037 28.6 7.2 29 34-64 16-45 (334)
313 3v65_B Low-density lipoprotein 75.6 23 0.0008 26.6 12.0 29 32-62 247-276 (386)
314 4a9v_A PHOX; hydrolase, beta-p 74.1 16 0.00054 30.0 8.0 15 33-47 478-492 (592)
315 3ii7_A Kelch-like protein 7; p 71.7 24 0.00083 25.1 10.7 24 120-143 200-228 (306)
316 2vpj_A Kelch-like protein 12; 71.4 24 0.00083 25.0 10.6 24 120-143 253-281 (301)
317 2xzh_A Clathrin heavy chain 1; 70.8 33 0.0011 26.3 14.9 135 7-146 125-296 (365)
318 1bpo_A Protein (clathrin); cla 68.7 43 0.0015 26.7 12.5 135 7-146 124-295 (494)
319 2g8s_A Glucose/sorbosone dehyd 68.5 30 0.001 25.7 8.2 46 2-47 33-86 (353)
320 1cru_A Protein (soluble quinop 68.4 40 0.0014 26.2 10.7 15 114-128 148-162 (454)
321 3m0c_C LDL receptor, low-densi 67.8 55 0.0019 27.6 14.1 60 6-70 491-552 (791)
322 3p5b_L Low density lipoprotein 67.3 38 0.0013 25.6 13.1 29 32-62 160-189 (400)
323 1cru_A Protein (soluble quinop 64.5 20 0.00067 28.0 6.6 19 32-50 145-163 (454)
324 2g8s_A Glucose/sorbosone dehyd 62.2 16 0.00055 27.2 5.6 16 33-48 132-147 (353)
325 1olz_A Semaphorin 4D; developm 60.7 28 0.00096 28.8 7.1 55 2-56 419-477 (663)
326 3sbq_A Nitrous-oxide reductase 60.3 8.5 0.00029 31.7 3.8 60 2-61 339-408 (638)
327 3das_A Putative oxidoreductase 59.7 54 0.0018 24.7 11.4 39 3-41 47-90 (347)
328 2xzh_A Clathrin heavy chain 1; 59.2 21 0.00071 27.4 5.6 30 116-146 73-102 (365)
329 3ei3_A DNA damage-binding prot 58.6 98 0.0033 27.4 12.0 107 6-139 53-164 (1158)
330 1tl2_A L10, protein (tachylect 58.5 48 0.0017 23.8 8.0 24 34-61 91-114 (236)
331 2xbg_A YCF48-like protein; pho 57.8 52 0.0018 23.9 11.7 24 31-55 163-186 (327)
332 1zgk_A Kelch-like ECH-associat 57.8 48 0.0017 23.6 10.3 24 120-143 215-243 (308)
333 2wg3_C Hedgehog-interacting pr 54.8 75 0.0026 24.9 11.2 40 2-41 30-79 (463)
334 4asc_A Kelch repeat and BTB do 54.5 56 0.0019 23.3 8.7 50 8-63 117-174 (315)
335 1q47_A Semaphorin 3A; beta pro 52.9 48 0.0016 26.4 7.1 55 2-56 425-487 (495)
336 4asc_A Kelch repeat and BTB do 52.7 60 0.002 23.1 9.6 24 120-143 196-224 (315)
337 4gq2_M Nucleoporin NUP120; bet 51.8 24 0.00081 30.4 5.5 37 32-70 237-273 (950)
338 4gz8_A Semaphorin-3A; multi-do 50.8 48 0.0016 27.5 6.9 55 2-56 433-495 (667)
339 3s25_A Hypothetical 7-bladed b 50.4 71 0.0024 23.3 10.4 59 7-73 87-147 (302)
340 3s94_A LRP-6, low-density lipo 48.7 1.1E+02 0.0037 24.9 12.0 51 5-56 15-66 (619)
341 2vpj_A Kelch-like protein 12; 48.2 69 0.0023 22.5 12.4 24 120-143 159-187 (301)
342 3s94_A LRP-6, low-density lipo 43.8 1.3E+02 0.0044 24.4 12.5 49 5-56 103-154 (619)
343 3ol2_B Plexin-B1; beta-propell 41.0 67 0.0023 25.8 6.2 55 2-56 404-461 (528)
344 3nvq_A Semaphorin-7A; beta-pro 40.3 73 0.0025 26.1 6.4 55 2-56 384-444 (590)
345 4fhn_B Nucleoporin NUP120; pro 39.7 22 0.00077 31.1 3.5 36 33-70 240-275 (1139)
346 3al9_A Plexin-A2; beta-propell 39.5 37 0.0013 27.3 4.5 56 1-56 416-476 (539)
347 4a9v_A PHOX; hydrolase, beta-p 38.1 73 0.0025 26.1 6.0 39 9-48 510-548 (592)
348 2woz_A Kelch repeat and BTB do 34.3 1.2E+02 0.0042 21.4 8.7 41 8-52 175-217 (318)
349 3oky_B Putative uncharacterize 34.0 1.3E+02 0.0046 24.4 7.0 26 31-56 470-495 (565)
350 2uvk_A YJHT; unknown function, 32.5 1.4E+02 0.0048 21.5 7.7 13 131-143 168-180 (357)
351 4a0p_A LRP6, LRP-6, low-densit 32.4 2E+02 0.0069 23.3 13.1 50 5-56 408-460 (628)
352 2xn4_A Kelch-like protein 2; s 32.0 1.3E+02 0.0045 21.0 12.4 24 120-143 204-232 (302)
353 3mwp_A Nucleoprotein; structur 31.3 10 0.00034 30.1 -0.0 19 126-144 162-180 (577)
354 1uhe_A Aspartate 1-decarboxyla 29.5 27 0.00092 21.5 1.7 16 132-147 18-33 (97)
355 1vc3_B L-aspartate-alpha-decar 28.7 28 0.00097 21.4 1.7 16 132-147 19-34 (96)
356 2wl1_A Pyrin, marenostrin; amy 27.7 33 0.0011 23.5 2.2 20 128-147 139-158 (191)
357 3plx_B Aspartate 1-decarboxyla 27.2 31 0.0011 21.4 1.7 16 132-147 19-34 (102)
358 3al9_A Plexin-A2; beta-propell 26.3 2.1E+02 0.0071 22.9 6.9 26 32-57 401-428 (539)
359 3ott_A Two-component system se 26.2 2.6E+02 0.009 22.7 11.7 55 4-64 162-221 (758)
360 1zso_A Hypothetical protein; s 26.1 1.3E+02 0.0043 20.3 4.8 29 33-63 112-140 (164)
361 3f7f_A Nucleoporin NUP120; nuc 25.9 84 0.0029 26.4 4.6 31 39-71 228-258 (729)
362 3zwu_A Alkaline phosphatase PH 25.0 1.6E+02 0.0055 24.0 6.0 38 9-47 510-547 (592)
363 2c45_A Aspartate 1-decarboxyla 24.9 48 0.0016 21.7 2.4 17 131-147 42-58 (139)
364 4a0p_A LRP6, LRP-6, low-densit 24.6 2.8E+02 0.0096 22.4 12.7 55 5-62 12-67 (628)
365 2fbe_A Predicted: similar to R 24.4 41 0.0014 23.3 2.2 20 128-147 136-155 (201)
366 3oug_A Aspartate 1-decarboxyla 23.2 40 0.0014 21.3 1.7 17 131-147 45-61 (114)
367 2wg3_C Hedgehog-interacting pr 23.0 70 0.0024 25.0 3.5 27 33-61 16-43 (463)
368 3oky_A Plexin-A2; transmembran 22.8 1.6E+02 0.0054 24.5 5.6 55 2-56 416-475 (681)
369 2vok_A 52 kDa RO protein; poly 22.4 48 0.0016 22.7 2.2 20 128-147 134-154 (188)
370 3b7f_A Glycosyl hydrolase, BNR 20.4 2.6E+02 0.0089 20.5 6.7 50 2-52 26-77 (394)
371 2zwa_A Leucine carboxyl methyl 20.3 3.5E+02 0.012 22.0 9.6 33 110-142 539-579 (695)
372 1pqh_A Aspartate 1-decarboxyla 20.0 50 0.0017 21.8 1.7 17 131-147 59-75 (143)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.89 E-value=1.7e-22 Score=155.23 Aligned_cols=144 Identities=12% Similarity=0.090 Sum_probs=103.1
Q ss_pred CeEeecCCeEEEEECCCCcccee--EecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCce
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFK--RINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~--~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~ 78 (147)
|++|+.||+|+|||+.+++.... .....|...|++|+|+|||++|++|+.||+|+| ||+++++.+.++.+|.....
T Consensus 96 l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~i--wd~~~~~~~~~~~~h~~~V~ 173 (344)
T 4gqb_B 96 ILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKV--WDLAQQVVLSSYRAHAAQVT 173 (344)
T ss_dssp EEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE--EETTTTEEEEEECCCSSCEE
T ss_pred EEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEE--EECCCCcEEEEEcCcCCceE
Confidence 57899999999999998864321 112246678999999999999999999999999 78888899999999987643
Q ss_pred E--EeeccceeeeecCCC-cceeeeeee--eeeee----eec--eEEEEEecCC-CeEEEeCCCCcEEEeecCCceeeec
Q 032092 79 T--CSVISFTSILAGDAP-KYSSFYKVK--RLHLF----VKS--HVIVLFVQIH-HTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 79 ~--~~v~~~~~~~~~~~~-~~~~~~~~~--~~~~~----~~~--~~~~~fspdg-~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
. +......++++++.| .++++. +. +.... ..+ ..+++|+|++ ++||+|+.||+|+|||+++++++++
T Consensus 174 ~~~~~~~~~~~l~s~s~D~~v~iwd-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~ 252 (344)
T 4gqb_B 174 CVAASPHKDSVFLSCSEDNRILLWD-TRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLS 252 (344)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEE-TTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEE
T ss_pred EEEecCCCCCceeeecccccccccc-ccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEE
Confidence 2 333333345555544 555543 21 11111 122 3578999965 7899999999999999999988765
Q ss_pred C
Q 032092 147 F 147 (147)
Q Consensus 147 ~ 147 (147)
|
T Consensus 253 ~ 253 (344)
T 4gqb_B 253 S 253 (344)
T ss_dssp E
T ss_pred E
Confidence 3
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.89 E-value=5.9e-22 Score=150.29 Aligned_cols=142 Identities=18% Similarity=0.240 Sum_probs=107.6
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCc--e
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGS--E 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~--~ 78 (147)
|++|+.||.|++||+++++.. ..+. .+...+.+++|+|+|++|++|+.||.|++ ||.++++.+.++.+|.... .
T Consensus 137 l~~g~~dg~v~i~~~~~~~~~-~~~~-~~~~~v~~~~~spdg~~lasg~~dg~i~i--wd~~~~~~~~~~~~h~~~v~~l 212 (321)
T 3ow8_A 137 LATGTHVGKVNIFGVESGKKE-YSLD-TRGKFILSIAYSPDGKYLASGAIDGIINI--FDIATGKLLHTLEGHAMPIRSL 212 (321)
T ss_dssp EEEECTTSEEEEEETTTCSEE-EEEE-CSSSCEEEEEECTTSSEEEEEETTSCEEE--EETTTTEEEEEECCCSSCCCEE
T ss_pred EEEEcCCCcEEEEEcCCCcee-EEec-CCCceEEEEEECCCCCEEEEEcCCCeEEE--EECCCCcEEEEEcccCCceeEE
Confidence 578999999999999998643 3333 23457999999999999999999999999 7888888888898887643 3
Q ss_pred EEeeccceeeeecCCC-cceeeee-eeeeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeeecC
Q 032092 79 TCSVISFTSILAGDAP-KYSSFYK-VKRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKVF 147 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~~ 147 (147)
.+..+.. .+++|+++ .++++.. .......+.+| ..++|+|++++|++|+.|++|+|||+++++++++|
T Consensus 213 ~~spd~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 286 (321)
T 3ow8_A 213 TFSPDSQ-LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 286 (321)
T ss_dssp EECTTSC-EEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEcCCCC-EEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEE
Confidence 3444443 34444445 5555442 12233455565 57999999999999999999999999999888764
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.89 E-value=7.1e-22 Score=148.27 Aligned_cols=143 Identities=17% Similarity=0.271 Sum_probs=101.6
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEcc-CCCEEEEEeeCCeEEEEeecCCCCcceeEEEecc-CCce
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFP-DQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHR-DGSE 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~sp-dg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~-~~~~ 78 (147)
|++|+.||+|++||++++......+ ..|...|.+++|+| ++..|++|+.||+|++ ||.+++.....+..+. ....
T Consensus 112 l~sgs~D~~v~lWd~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~i--wd~~~~~~~~~~~~~~~~~v~ 188 (304)
T 2ynn_A 112 VLSGSDDLTVKLWNWENNWALEQTF-EGHEHFVMCVAFNPKDPSTFASGCLDRTVKV--WSLGQSTPNFTLTTGQERGVN 188 (304)
T ss_dssp EEEEETTSCEEEEEGGGTTEEEEEE-CCCCSCEEEEEECTTCTTEEEEEETTSEEEE--EETTCSSCSEEEECCCTTCEE
T ss_pred EEEECCCCeEEEEECCCCcchhhhh-cccCCcEEEEEECCCCCCEEEEEeCCCeEEE--EECCCCCccceeccCCcCcEE
Confidence 5899999999999999875433333 34667899999999 6789999999999999 6766666666665432 2211
Q ss_pred --EEeec-cceeeeecCCC-cceeeee-eeeeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 79 --TCSVI-SFTSILAGDAP-KYSSFYK-VKRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 79 --~~~v~-~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.+... .-..+++|+++ .+++|.. ..+....+.+| ..++|+|++++|+||+.||+|+|||+++++++++
T Consensus 189 ~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~ 265 (304)
T 2ynn_A 189 YVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKT 265 (304)
T ss_dssp EEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeee
Confidence 12111 11234444444 5555442 12344566666 4689999999999999999999999999888765
No 4
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.89 E-value=1.2e-21 Score=148.06 Aligned_cols=140 Identities=19% Similarity=0.217 Sum_probs=102.6
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETC 80 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~ 80 (147)
|++|+.|++|+|||+++++. ...+. .|..+|.+++|+|++++|++|+.||+|++ ||.+ +..+.++.+|.......
T Consensus 80 l~s~s~D~~v~~wd~~~~~~-~~~~~-~h~~~v~~~~~~~~~~~l~s~s~D~~i~v--wd~~-~~~~~~~~~h~~~v~~~ 154 (319)
T 3frx_A 80 ALSASWDKTLRLWDVATGET-YQRFV-GHKSDVMSVDIDKKASMIISGSRDKTIKV--WTIK-GQCLATLLGHNDWVSQV 154 (319)
T ss_dssp EEEEETTSEEEEEETTTTEE-EEEEE-CCSSCEEEEEECTTSCEEEEEETTSCEEE--EETT-SCEEEEECCCSSCEEEE
T ss_pred EEEEeCCCEEEEEECCCCCe-eEEEc-cCCCcEEEEEEcCCCCEEEEEeCCCeEEE--EECC-CCeEEEEeccCCcEEEE
Confidence 58999999999999999863 44443 46678999999999999999999999999 5654 45667777887543221
Q ss_pred eec--------cceeeeecCCCcceeeeeee--eeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 81 SVI--------SFTSILAGDAPKYSSFYKVK--RLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 81 ~v~--------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
... ...+++++.|..++.+. +. +....+.+| ..++|+|+|++|++|+.||.|+|||+.+++++++
T Consensus 155 ~~~~~~~~~~~~~~l~s~~~d~~i~~wd-~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~ 233 (319)
T 3frx_A 155 RVVPNEKADDDSVTIISAGNDKMVKAWN-LNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYT 233 (319)
T ss_dssp EECCC------CCEEEEEETTSCEEEEE-TTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE
T ss_pred EEccCCCCCCCccEEEEEeCCCEEEEEE-CCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 111 11234444444554443 32 223345555 5799999999999999999999999999888765
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.88 E-value=1.5e-21 Score=146.53 Aligned_cols=139 Identities=16% Similarity=0.168 Sum_probs=103.6
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCce--
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE-- 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~-- 78 (147)
|++|+.||+|+|||+.+++. ...+. .+..+|++++|+|++++|++|+.|++|++ ||..+++.+.++.+|.....
T Consensus 28 l~s~~~dg~v~lWd~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~l~s~s~d~~i~v--wd~~~~~~~~~~~~h~~~v~~~ 103 (304)
T 2ynn_A 28 VLTTLYSGRVELWNYETQVE-VRSIQ-VTETPVRAGKFIARKNWIIVGSDDFRIRV--FNYNTGEKVVDFEAHPDYIRSI 103 (304)
T ss_dssp EEEEETTSEEEEEETTTTEE-EEEEE-CCSSCEEEEEEEGGGTEEEEEETTSEEEE--EETTTCCEEEEEECCSSCEEEE
T ss_pred EEEEcCCCcEEEEECCCCce-eEEee-ccCCcEEEEEEeCCCCEEEEECCCCEEEE--EECCCCcEEEEEeCCCCcEEEE
Confidence 58999999999999999853 44444 34568999999999999999999999999 77778888899999987543
Q ss_pred EEeeccceeeeecCCCcceeeeeee--eeeeeeece----EEEEEec-CCCeEEEeCCCCcEEEeecCCcee
Q 032092 79 TCSVISFTSILAGDAPKYSSFYKVK--RLHLFVKSH----VIVLFVQ-IHHTFATAGSDGAFNFWDKDSKQR 143 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~fsp-dg~~latg~~Dg~i~iWd~~~~~~ 143 (147)
.+..+...+++++.|..+++|.... .....+.+| ..++|+| ++++||+|+.|++|++||+++++.
T Consensus 104 ~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~ 175 (304)
T 2ynn_A 104 AVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP 175 (304)
T ss_dssp EECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSC
T ss_pred EEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCc
Confidence 3333333334444444555544211 233455666 4789999 579999999999999999976543
No 6
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.88 E-value=1.2e-21 Score=151.31 Aligned_cols=140 Identities=16% Similarity=0.226 Sum_probs=100.5
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCC----
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDG---- 76 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~---- 76 (147)
|++|+.||+|++||++....+...+. .|..+|++++|+|++++|++|+.||+|+| ||.++++.+..+..+...
T Consensus 221 l~sgs~D~~v~~wd~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~D~~i~l--wd~~~~~~~~~~~~~~~~~~~~ 297 (380)
T 3iz6_a 221 FISGSCDTTVRLWDLRITSRAVRTYH-GHEGDINSVKFFPDGQRFGTGSDDGTCRL--FDMRTGHQLQVYNREPDRNDNE 297 (380)
T ss_dssp EEEEETTSCEEEEETTTTCCCCEEEC-CCSSCCCEEEECTTSSEEEEECSSSCEEE--EETTTTEEEEEECCCCSSSCCS
T ss_pred EEEEECCCeEEEEECCCCCcceEEEC-CcCCCeEEEEEecCCCeEEEEcCCCeEEE--EECCCCcEEEEecccccccccc
Confidence 57899999999999986544444443 46678999999999999999999999999 788878777777554321
Q ss_pred -----ceEEeeccceeeeecCCCcceeeeee-eeeeeee----ece----EEEEEecCCCeEEEeCCCCcEEEeecCCce
Q 032092 77 -----SETCSVISFTSILAGDAPKYSSFYKV-KRLHLFV----KSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQ 142 (147)
Q Consensus 77 -----~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~ 142 (147)
..++..+.-.+++++.+..+.+|... .+....+ .+| ..++|+|||++|+||+.||+|+||++..++
T Consensus 298 ~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 298 LPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp SCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred cCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 12344444434444444455555421 1111222 455 468999999999999999999999998765
Q ss_pred e
Q 032092 143 R 143 (147)
Q Consensus 143 ~ 143 (147)
.
T Consensus 378 ~ 378 (380)
T 3iz6_a 378 K 378 (380)
T ss_dssp S
T ss_pred c
Confidence 4
No 7
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.87 E-value=2.3e-21 Score=148.90 Aligned_cols=140 Identities=14% Similarity=0.167 Sum_probs=98.6
Q ss_pred CeEeecCCeEEEEECCCCccceeEecC-CCCcceEEEEEccC-CCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCce
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINS-PLKYQMRCVAAFPD-QQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~-~~~~~i~~la~spd-g~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~ 78 (147)
|++|+.||+|+|||+++++. ...+.. .+...+.+++|+|+ +++|++|+.||+|+| ||.++++.+.++.+|.....
T Consensus 185 l~s~s~D~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~--wd~~~~~~~~~~~~h~~~v~ 261 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKP-ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSL--VDTKSTSCVLSSAVHSQCVT 261 (344)
T ss_dssp EEEEETTSCEEEEETTSSSC-EEECC----CCCEEEEEECSSCTTEEEEEETTSEEEE--EESCC--CCEEEECCSSCEE
T ss_pred eeeeccccccccccccccce-eeeeecceeeccceeeeecCCCCcceEEeccCCcEEE--EECCCCcEEEEEcCCCCCEE
Confidence 47899999999999999864 333322 23346899999996 568899999999999 78888899999999987543
Q ss_pred --EEeeccceeeeecCCC-cceeeeeeeeeeeeeece----EEEEEecCCC-eEEEeCCCCcEEEeecCCcee
Q 032092 79 --TCSVISFTSILAGDAP-KYSSFYKVKRLHLFVKSH----VIVLFVQIHH-TFATAGSDGAFNFWDKDSKQR 143 (147)
Q Consensus 79 --~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~fspdg~-~latg~~Dg~i~iWd~~~~~~ 143 (147)
++..+...++++|++| .+++|..-......+.+| .+++|+|+++ +|+|||.|++|++|++.+...
T Consensus 262 ~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 262 GLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred EEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 3444443445555555 455554222223445666 5799999985 688999999999999987543
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.87 E-value=5.1e-21 Score=145.09 Aligned_cols=144 Identities=12% Similarity=0.070 Sum_probs=104.6
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCc--e
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGS--E 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~--~ 78 (147)
|++|+.|++|+|||++.++.........|...|.+++|+|++..+++|+.|++|++ ||..+++.+..+..|.... .
T Consensus 51 l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~l--Wd~~~~~~~~~~~~~~~~~~~~ 128 (321)
T 3ow8_A 51 VVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRL--WDLENGKQIKSIDAGPVDAWTL 128 (321)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEE--EETTTTEEEEEEECCTTCCCCE
T ss_pred EEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEE--EECCCCCEEEEEeCCCccEEEE
Confidence 58999999999999987643222222356678999999999999999999999999 7777788888887776532 3
Q ss_pred EEeeccceeeeecCCCcceeeeee-eeeeeeeec----eEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 79 TCSVISFTSILAGDAPKYSSFYKV-KRLHLFVKS----HVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.+..+...+++++.+..+.++... .+....+.. ...++|+|+|++||+|+.||.|++||+++++++++
T Consensus 129 ~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~ 201 (321)
T 3ow8_A 129 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT 201 (321)
T ss_dssp EECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 444444433444444444444311 122223333 35789999999999999999999999999988765
No 9
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.87 E-value=7.3e-21 Score=144.37 Aligned_cols=141 Identities=14% Similarity=0.199 Sum_probs=95.1
Q ss_pred CeEeecCCeEEEEECCCCc-cceeEecC-CCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCC-----CCcceeEEEec
Q 032092 1 MVVGTADRNLVVFNLQNPQ-TEFKRINS-PLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDS-----QQSKNFTFKCH 73 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~-~~~~~~~~-~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~-----~~~~~~~~~~h 73 (147)
||+|+.|++|+|||++.++ .....+.. .|..+|++++|+|++++|++|+.|++|+||+.+.. +.+....+.+|
T Consensus 27 las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h 106 (330)
T 2hes_X 27 LATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGH 106 (330)
T ss_dssp EEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC--
T ss_pred EEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCC
Confidence 5899999999999998753 22233422 36678999999999999999999999999544321 23345667788
Q ss_pred cCCce--EEeeccceeeeecCCCcceeeeeee-----eeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCc
Q 032092 74 RDGSE--TCSVISFTSILAGDAPKYSSFYKVK-----RLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSK 141 (147)
Q Consensus 74 ~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~ 141 (147)
..... .+..+...++++|.|..++++..-. +....+.+| ..++|+|++++|+||+.|++|++||..++
T Consensus 107 ~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 107 ENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp --CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETT
T ss_pred CCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 76533 3333443334445555555544211 233455666 57999999999999999999999998765
No 10
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.87 E-value=6.4e-21 Score=145.06 Aligned_cols=142 Identities=15% Similarity=0.129 Sum_probs=105.8
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCce--
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE-- 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~-- 78 (147)
|++|+.|++|++||+++++. ...+. .|..+|.+++|+|++++|++|+.||+|++ ||.++++...++.+|.....
T Consensus 157 l~s~s~d~~i~~wd~~~~~~-~~~~~-~h~~~v~~~~~~~~~~~l~sg~~d~~v~~--wd~~~~~~~~~~~~h~~~v~~v 232 (340)
T 1got_B 157 IVTSSGDTTCALWDIETGQQ-TTTFT-GHTGDVMSLSLAPDTRLFVSGACDASAKL--WDVREGMCRQTFTGHESDINAI 232 (340)
T ss_dssp EEEEETTSCEEEEETTTTEE-EEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEE--EETTTCSEEEEECCCSSCEEEE
T ss_pred EEEEECCCcEEEEECCCCcE-EEEEc-CCCCceEEEEECCCCCEEEEEeCCCcEEE--EECCCCeeEEEEcCCcCCEEEE
Confidence 57899999999999999853 34443 45668999999999999999999999999 78888888888988876532
Q ss_pred EEeeccceeeeecCCCcceeeeee-eeeeeee------eceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 79 TCSVISFTSILAGDAPKYSSFYKV-KRLHLFV------KSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
++..+.-.+++++.|..+++|..- .+....+ .+..+++|+|+|++|++|+.||.|++||+.+++.+.+
T Consensus 233 ~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~ 307 (340)
T 1got_B 233 CFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGV 307 (340)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeE
Confidence 343444334444555555554411 1111111 2346799999999999999999999999988877654
No 11
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.87 E-value=3.7e-21 Score=150.14 Aligned_cols=142 Identities=11% Similarity=0.011 Sum_probs=106.0
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCce--
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE-- 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~-- 78 (147)
|++|+.||+|+|||+.+++. ...+. .|..+|.+++|+|++++|++|+.||+|+| ||..+++.+.++.+|.....
T Consensus 123 l~s~s~Dg~i~vwd~~~~~~-~~~l~-~h~~~V~~v~~~~~~~~l~sgs~D~~i~i--wd~~~~~~~~~~~~h~~~V~~v 198 (410)
T 1vyh_C 123 MVSASEDATIKVWDYETGDF-ERTLK-GHTDSVQDISFDHSGKLLASCSADMTIKL--WDFQGFECIRTMHGHDHNVSSV 198 (410)
T ss_dssp EEEEESSSCEEEEETTTCCC-CEEEC-CCSSCEEEEEECTTSSEEEEEETTSCCCE--EETTSSCEEECCCCCSSCEEEE
T ss_pred EEEEeCCCeEEEEECCCCcE-EEEEe-ccCCcEEEEEEcCCCCEEEEEeCCCeEEE--EeCCCCceeEEEcCCCCCEEEE
Confidence 58999999999999999864 34443 46668999999999999999999999999 67777777788888876533
Q ss_pred EEeeccceeeeecCCCcceeeee-eeeeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 79 TCSVISFTSILAGDAPKYSSFYK-VKRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.+..+...++++|.|..+++|.. .......+.+| ..++|+|+|++|++|+.|++|++||+.++++..+
T Consensus 199 ~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~ 271 (410)
T 1vyh_C 199 SIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271 (410)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeE
Confidence 23333333444455444544442 12234455666 4689999999999999999999999998876543
No 12
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.86 E-value=4.9e-21 Score=143.42 Aligned_cols=138 Identities=16% Similarity=0.091 Sum_probs=95.9
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCC-ceE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDG-SET 79 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~-~~~ 79 (147)
+++|+.|+.|++||+++++. ...+. .+..+|++|+|+|++++|++|+.||+|++ ||.++.+.+..+..+..- ...
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~-~~~~~-~h~~~v~~~~~s~~~~~l~s~s~Dg~i~i--wd~~~~~~~~~~~~~~~v~~~~ 263 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKL-KTNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAML--WDLNEGKHLYTLDGGDIINALC 263 (340)
T ss_dssp EEEEETTSCEEEEETTTTEE-EEEEC-CCSSCEEEEEECTTSSEEEEEETTCEEEE--EETTTTEEEEEEECSSCEEEEE
T ss_pred EEEEcCCCEEEEEECCCCce-eeEec-CCCCcEEEEEECCCCCEEEEEeCCCeEEE--EEeccCceeeeecCCceEEeee
Confidence 36889999999999999853 33343 46678999999999999999999999999 777777777777755431 122
Q ss_pred EeeccceeeeecCCCcceeeee--------eeee--eeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCcee
Q 032092 80 CSVISFTSILAGDAPKYSSFYK--------VKRL--HLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQR 143 (147)
Q Consensus 80 ~~v~~~~~~~~~~~~~~~~~~~--------~~~~--~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~ 143 (147)
+..+. .+++++.+..+.++.. +... .....+| ++++|+|||++|+||+.||.|+|||+++|.+
T Consensus 264 ~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 264 FSPNR-YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp ECSSS-SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC---
T ss_pred cCCCC-ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcCC
Confidence 32232 3455565555544431 1111 1122333 5799999999999999999999999998863
No 13
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.86 E-value=2e-20 Score=138.84 Aligned_cols=137 Identities=14% Similarity=0.161 Sum_probs=100.9
Q ss_pred EeecCCeEEEEECCCCccceeEec-CCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEEe
Q 032092 3 VGTADRNLVVFNLQNPQTEFKRIN-SPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCS 81 (147)
Q Consensus 3 ~gs~dg~v~iwdi~~~~~~~~~~~-~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~ 81 (147)
+.+.|++|+|||+.+++. .+.+. ..+...|++++|+|++++|++|+.||+|+| ||.++++.+.++.+|........
T Consensus 40 Avg~D~tV~iWd~~tg~~-~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~i--w~~~~~~~~~~~~~h~~~~~~~~ 116 (318)
T 4ggc_A 40 AVALDNSVYLWSASSGDI-LQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQL--WDVQQQKRLRNMTSHSARVGSLS 116 (318)
T ss_dssp EEEETTEEEEEETTTCCE-EEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEE--EETTTTEEEEEEECCSSCEEEEE
T ss_pred EEEeCCEEEEEECCCCCE-EEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEE--eecCCceeEEEecCccceEEEee
Confidence 345699999999999864 34443 235557999999999999999999999999 78888888899999987654454
Q ss_pred eccceeeeecCCC-cceeeeee--eeeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCcee
Q 032092 82 VISFTSILAGDAP-KYSSFYKV--KRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQR 143 (147)
Q Consensus 82 v~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~ 143 (147)
.... .+++|+.+ .+..+... ......+.+| ..++|+|++++|++|+.||.|++||+++++.
T Consensus 117 ~~~~-~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 184 (318)
T 4ggc_A 117 WNSY-ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG 184 (318)
T ss_dssp EETT-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTT
T ss_pred cCCC-EEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcc
Confidence 4454 34444444 33333321 1223344555 4689999999999999999999999987653
No 14
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.86 E-value=1e-20 Score=144.30 Aligned_cols=142 Identities=11% Similarity=0.079 Sum_probs=101.0
Q ss_pred CeEeecCCeEEEEECCCCcccee-EecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCce-
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFK-RINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE- 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~-~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~- 78 (147)
||+|+.|++|+|||+.+++.... .....|..+|++++|+|+|++|++|+.|++++||+.+..+.+...++.+|.....
T Consensus 31 las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~ 110 (345)
T 3fm0_A 31 LASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKS 110 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEE
T ss_pred EEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceE
Confidence 68999999999999988742211 2234566789999999999999999999999996554433345677888876533
Q ss_pred -EEeeccceeeeecCCCcceeeeee----eeeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCce
Q 032092 79 -TCSVISFTSILAGDAPKYSSFYKV----KRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQ 142 (147)
Q Consensus 79 -~~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~ 142 (147)
.+..+.-.+++++.|..++++..- ......+.+| ..++|+|++++||+|+.|++|++||.++++
T Consensus 111 v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~ 183 (345)
T 3fm0_A 111 VAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDD 183 (345)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTE
T ss_pred EEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCC
Confidence 343444334444555555554421 1223345555 478999999999999999999999988764
No 15
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.86 E-value=2.2e-20 Score=139.69 Aligned_cols=142 Identities=18% Similarity=0.108 Sum_probs=106.0
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCce--
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE-- 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~-- 78 (147)
|++|+.||.|++||+.+++. ...+. .+..+|.+++|+|++++|++|+.||.|++ ||.++++.+..+.+|.....
T Consensus 38 l~s~~~dg~i~iw~~~~~~~-~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~~i~v--wd~~~~~~~~~~~~~~~~v~~~ 113 (312)
T 4ery_A 38 LASSSADKLIKIWGAYDGKF-EKTIS-GHKLGISDVAWSSDSNLLVSASDDKTLKI--WDVSSGKCLKTLKGHSNYVFCC 113 (312)
T ss_dssp EEEEETTSCEEEEETTTCCE-EEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEE--EETTTCCEEEEEECCSSCEEEE
T ss_pred EEEeeCCCeEEEEeCCCccc-chhhc-cCCCceEEEEEcCCCCEEEEECCCCEEEE--EECCCCcEEEEEcCCCCCEEEE
Confidence 58899999999999998753 33343 45668999999999999999999999999 77777888888988876533
Q ss_pred EEeeccceeeeecCCCcceeeeee-eeeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 79 TCSVISFTSILAGDAPKYSSFYKV-KRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.+....-.+++++.+..++++... .+....+.+| ..++|+|++++|++|+.||.|++||+++++.+.+
T Consensus 114 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~ 186 (312)
T 4ery_A 114 NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 186 (312)
T ss_dssp EECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeE
Confidence 233333333444555455554421 2233445444 5689999999999999999999999998877653
No 16
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.86 E-value=1.6e-20 Score=146.50 Aligned_cols=141 Identities=18% Similarity=0.174 Sum_probs=104.9
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceE-
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSET- 79 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~- 79 (147)
|++|+.|++|++||+++++. ...+. .+...|++++++|++++|++|+.||+|++ ||.++++...++.+|.....+
T Consensus 207 l~s~s~D~~i~~wd~~~~~~-~~~~~-~h~~~v~~~~~~~~g~~l~s~s~D~~v~v--wd~~~~~~~~~~~~h~~~v~~~ 282 (410)
T 1vyh_C 207 IVSASRDKTIKMWEVQTGYC-VKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRV--WVVATKECKAELREHRHVVECI 282 (410)
T ss_dssp EEEEETTSEEEEEETTTCCE-EEEEE-CCSSCEEEEEECTTSSEEEEEETTSCEEE--EETTTCCEEEEECCCSSCEEEE
T ss_pred EEEEeCCCeEEEEECCCCcE-EEEEe-CCCccEEEEEECCCCCEEEEEcCCCeEEE--EECCCCceeeEecCCCceEEEE
Confidence 57899999999999999864 44454 35567999999999999999999999999 777777777888888764322
Q ss_pred -Eeecc-------------------ceeeeecCCC-cceeeeeee--eeeeeeece----EEEEEecCCCeEEEeCCCCc
Q 032092 80 -CSVIS-------------------FTSILAGDAP-KYSSFYKVK--RLHLFVKSH----VIVLFVQIHHTFATAGSDGA 132 (147)
Q Consensus 80 -~~v~~-------------------~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~----~~~~fspdg~~latg~~Dg~ 132 (147)
+.... -..+++|+.+ .+++|. +. .....+.+| ..++|+|+|++|++|+.||+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd-~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~ 361 (410)
T 1vyh_C 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD-VSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT 361 (410)
T ss_dssp EECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEE-TTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTE
T ss_pred EEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEE-CCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 22210 1234455555 444443 32 334455666 47999999999999999999
Q ss_pred EEEeecCCceeeec
Q 032092 133 FNFWDKDSKQRLKV 146 (147)
Q Consensus 133 i~iWd~~~~~~~~~ 146 (147)
|++||+++++++++
T Consensus 362 i~vwd~~~~~~~~~ 375 (410)
T 1vyh_C 362 LRVWDYKNKRCMKT 375 (410)
T ss_dssp EEEECCTTSCCCEE
T ss_pred EEEEECCCCceEEE
Confidence 99999998887654
No 17
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.86 E-value=2.1e-20 Score=142.23 Aligned_cols=143 Identities=9% Similarity=0.102 Sum_probs=102.0
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCC--cceeEEEeccCCce
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQ--SKNFTFKCHRDGSE 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~--~~~~~~~~h~~~~~ 78 (147)
|++|+.||+|+|||+.+++. ...+. .+...|.+++|+|++++|++|+.|+.|++|+++...+ +....+.+|.....
T Consensus 70 l~s~s~Dg~v~iWd~~~~~~-~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~ 147 (340)
T 1got_B 70 LLSASQDGKLIIWDSYTTNK-VHAIP-LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLS 147 (340)
T ss_dssp EEEEETTTEEEEEETTTCCE-EEEEE-CSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEE
T ss_pred EEEEeCCCcEEEEECCCCCc-ceEee-cCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEE
Confidence 58999999999999998864 34443 3456799999999999999999999999954433222 23456677876432
Q ss_pred E--EeeccceeeeecCCCcceeeeee-eeeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 79 T--CSVISFTSILAGDAPKYSSFYKV-KRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 79 ~--~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
+ +.... .+++++.|..+++|... .+....+.+| ..++|+|++++|++|+.||.|++||+++++++.+
T Consensus 148 ~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~ 221 (340)
T 1got_B 148 CCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT 221 (340)
T ss_dssp EEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE
T ss_pred EEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEE
Confidence 2 22222 24455555555555421 2334455555 5799999999999999999999999999887654
No 18
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.85 E-value=9.7e-21 Score=145.47 Aligned_cols=138 Identities=17% Similarity=0.152 Sum_probs=98.6
Q ss_pred CeEeecCCeEEEEECCCCccceeEec-CCCCcceEEEEEccC-CCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCce
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRIN-SPLKYQMRCVAAFPD-QQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~-~~~~~~i~~la~spd-g~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~ 78 (147)
+++++.||+|++||+++++.. ..+. ..+...+.+++|+|+ +++|++|+.|+.|++ ||+++++...++.+|.....
T Consensus 197 ~~s~~~dg~v~~wd~~~~~~~-~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~--wd~~~~~~~~~~~~~~~~v~ 273 (357)
T 4g56_B 197 FLSCGEDGRILLWDTRKPKPA-TRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSL--VNIKNPDSAQTSAVHSQNIT 273 (357)
T ss_dssp EEEEETTSCEEECCTTSSSCB-CBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEE--EESSCGGGCEEECCCSSCEE
T ss_pred eeeeccCCceEEEECCCCcee-eeeeeccccccccchhhhhcccceEEEeecccceeE--EECCCCcEeEEEeccceeEE
Confidence 478899999999999998642 2222 234456999999998 568899999999999 78888888889988876533
Q ss_pred --EEeeccceeeeecCCC-cceeeeeeeeeeeeeece----EEEEEec-CCCeEEEeCCCCcEEEeecCCc
Q 032092 79 --TCSVISFTSILAGDAP-KYSSFYKVKRLHLFVKSH----VIVLFVQ-IHHTFATAGSDGAFNFWDKDSK 141 (147)
Q Consensus 79 --~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~fsp-dg~~latg~~Dg~i~iWd~~~~ 141 (147)
++....-.++++|++| .+++|..-........+| ..++|+| |+++|||||.||+|++||+.+.
T Consensus 274 ~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 274 GLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 3333333345555555 455544211222233355 5799999 7899999999999999999754
No 19
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.85 E-value=5.1e-20 Score=137.71 Aligned_cols=138 Identities=14% Similarity=0.181 Sum_probs=94.3
Q ss_pred CeEeecCCeEEEEECCCCcc-ceeEecCCCCcceEEEEEccC--CCEEEEEeeCCeEEEEeecCCCCc--ceeEEEeccC
Q 032092 1 MVVGTADRNLVVFNLQNPQT-EFKRINSPLKYQMRCVAAFPD--QQGFWVGSIEGRVGVHHLDDSQQS--KNFTFKCHRD 75 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~-~~~~~~~~~~~~i~~la~spd--g~~l~~g~~dg~i~i~~~d~~~~~--~~~~~~~h~~ 75 (147)
|++|+.||+|+|||+++++. ....+ ..+..+|++++|+|+ |++|++|+.||+|++| |.+++. ....+.+|..
T Consensus 70 l~s~s~D~~v~iWd~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~w--d~~~~~~~~~~~~~~h~~ 146 (297)
T 2pm7_B 70 LASCSYDGKVMIWKEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPMLLVASSDGKVSVV--EFKENGTTSPIIIDAHAI 146 (297)
T ss_dssp EEEEETTTEEEEEEBSSSCBCCCEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEE--EBCSSSCBCCEEEECCSS
T ss_pred EEEEcCCCEEEEEEcCCCceEEEEEe-ecCCCceeEEEeCcCCCCcEEEEEECCCcEEEE--EecCCCceeeeeeecccC
Confidence 58999999999999998642 22223 235567999999998 8999999999999995 544332 2456677765
Q ss_pred Cce--EEeecc------------ceeeee-cCCCcceeeeeee-----eeeeeeece----EEEEEecCC---CeEEEeC
Q 032092 76 GSE--TCSVIS------------FTSILA-GDAPKYSSFYKVK-----RLHLFVKSH----VIVLFVQIH---HTFATAG 128 (147)
Q Consensus 76 ~~~--~~~v~~------------~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~----~~~~fspdg---~~latg~ 128 (147)
... .+.+.. -..+++ |.|..++++..-. .....+.+| ..++|+|++ ++||||+
T Consensus 147 ~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s 226 (297)
T 2pm7_B 147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVS 226 (297)
T ss_dssp CEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEE
Confidence 432 222221 123444 4444555544211 123456676 479999995 8999999
Q ss_pred CCCcEEEeecCCc
Q 032092 129 SDGAFNFWDKDSK 141 (147)
Q Consensus 129 ~Dg~i~iWd~~~~ 141 (147)
.|++|+|||+++.
T Consensus 227 ~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 227 QDRTCIIWTQDNE 239 (297)
T ss_dssp TTSCEEEEEESST
T ss_pred CCCcEEEEEeCCC
Confidence 9999999998763
No 20
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.85 E-value=1.3e-20 Score=145.32 Aligned_cols=133 Identities=12% Similarity=0.014 Sum_probs=89.1
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCC--CcceEEEEEccCCCEE------------EEEeeCCeEEEEeecCCCCcc
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPL--KYQMRCVAAFPDQQGF------------WVGSIEGRVGVHHLDDSQQSK 66 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~--~~~i~~la~spdg~~l------------~~g~~dg~i~i~~~d~~~~~~ 66 (147)
||+|+.|++|+|||+++++. .+++..++ ...+.+++|+|||+++ ++|+.|++|++ ||+.+++.
T Consensus 196 LaSgS~D~TIkIWDl~TGk~-l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIkl--Wd~~tgk~ 272 (356)
T 2w18_A 196 LLGTTIMNNIVIWNLKTGQL-LKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIV--INPKTTLS 272 (356)
T ss_dssp EEEEETTSEEEEEETTTCCE-EEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEE--EETTTTEE
T ss_pred EEEecCCCcEEEEECCCCcE-EEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEE--EECCCCEE
Confidence 57899999999999999964 45564322 2357888999999886 66889999999 77777776
Q ss_pred eeEEE-----eccCCceEEeeccceeeeecCCC-cceeeeeee--eeeeeeece----E-EEEEecCCCeEEEeCCCCcE
Q 032092 67 NFTFK-----CHRDGSETCSVISFTSILAGDAP-KYSSFYKVK--RLHLFVKSH----V-IVLFVQIHHTFATAGSDGAF 133 (147)
Q Consensus 67 ~~~~~-----~h~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~----~-~~~fspdg~~latg~~Dg~i 133 (147)
+..+. +|............ ++++|+.| .++++. +. +....+.+| . .++|||||++||||+.|++|
T Consensus 273 l~v~~~~~p~Gh~~~~lsg~~sg~-~lASgS~DgTIkIWD-l~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TI 350 (356)
T 2w18_A 273 VGVMLYCLPPGQAGRFLEGDVKDH-CAAAILTSGTIAIWD-LLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNI 350 (356)
T ss_dssp EEEEEECCCTTCCCCEEEEEEETT-EEEEEETTSCEEEEE-TTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCE
T ss_pred EEEEEeeccCCCcceeEccccCCC-EEEEEcCCCcEEEEE-CCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcE
Confidence 65542 45432111111111 34555555 455444 33 334456666 3 47999999999999999999
Q ss_pred EEeec
Q 032092 134 NFWDK 138 (147)
Q Consensus 134 ~iWd~ 138 (147)
+|||.
T Consensus 351 klWd~ 355 (356)
T 2w18_A 351 FVYHY 355 (356)
T ss_dssp EEEEE
T ss_pred EEecC
Confidence 99995
No 21
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.85 E-value=3.3e-20 Score=141.12 Aligned_cols=135 Identities=19% Similarity=0.193 Sum_probs=92.0
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEE---eccCCc
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFK---CHRDGS 77 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~---~h~~~~ 77 (147)
|++|+.|++|+|||+++++. ...+. .|..+|.+++|+|++++|++|+.||+|++ ||... .....+. +|....
T Consensus 91 l~s~s~D~~v~lwd~~~~~~-~~~~~-~h~~~v~~v~~sp~~~~l~s~~~d~~i~~--wd~~~-~~~~~~~~~~~~~~~v 165 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTGTT-YKRFV-GHQSEVYSVAFSPDNRQILSAGAEREIKL--WNILG-ECKFSSAEKENHSDWV 165 (343)
T ss_dssp EEEEETTSEEEEEETTSSCE-EEEEE-CCCSCEEEEEECSSTTEEEEEETTSCEEE--EESSS-CEEEECCTTTSCSSCE
T ss_pred EEEEcCCCcEEEEECCCCcE-EEEEc-CCCCcEEEEEECCCCCEEEEEcCCCEEEE--EeccC-CceeeeecccCCCcee
Confidence 57999999999999999863 44443 45678999999999999999999999999 55542 2222222 343321
Q ss_pred eE--Eeecc----------ceeeeecCCCcceeeeeeeeeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCC
Q 032092 78 ET--CSVIS----------FTSILAGDAPKYSSFYKVKRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDS 140 (147)
Q Consensus 78 ~~--~~v~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~ 140 (147)
.+ +.... ..+++++.|..++++..-.+....+.+| ..++|+|+|++||+|+.||.|++||+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 166 SCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp EEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred eeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 11 11111 1233445555555555222333445555 5799999999999999999999999843
No 22
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.85 E-value=7.2e-20 Score=140.35 Aligned_cols=142 Identities=13% Similarity=0.147 Sum_probs=104.5
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEcc--CCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCce
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFP--DQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~sp--dg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~ 78 (147)
|++|+.||+|++||+++++. ...+. .|..+|.+++++| +|++|++|+.||+|++ ||.++++...++.+|.....
T Consensus 169 l~t~s~D~~v~lwd~~~~~~-~~~~~-~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~--wd~~~~~~~~~~~~h~~~v~ 244 (354)
T 2pbi_B 169 ILTASGDGTCALWDVESGQL-LQSFH-GHGADVLCLDLAPSETGNTFVSGGCDKKAMV--WDMRSGQCVQAFETHESDVN 244 (354)
T ss_dssp EEEEETTSEEEEEETTTCCE-EEEEE-CCSSCEEEEEECCCSSCCEEEEEETTSCEEE--EETTTCCEEEEECCCSSCEE
T ss_pred EEEEeCCCcEEEEeCCCCeE-EEEEc-CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEE--EECCCCcEEEEecCCCCCeE
Confidence 57899999999999999863 44454 3556799999988 4789999999999999 78888888888888876532
Q ss_pred --EEeeccceeeeecCCCcceeeeee-eeeeeee------eceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 79 --TCSVISFTSILAGDAPKYSSFYKV-KRLHLFV------KSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 79 --~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.+..+.-.++++|.|..+++|..- .+....+ .+...++|+|+|++|++|+.|+.|++||+.+++.+.+
T Consensus 245 ~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~ 321 (354)
T 2pbi_B 245 SVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSI 321 (354)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEE
Confidence 333334334455555556555421 1111122 2345789999999999999999999999988876653
No 23
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.85 E-value=1e-19 Score=139.49 Aligned_cols=115 Identities=11% Similarity=0.114 Sum_probs=83.1
Q ss_pred CCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEEee--cc-ceeeeecCCC-cceeeee-ee
Q 032092 29 LKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSV--IS-FTSILAGDAP-KYSSFYK-VK 103 (147)
Q Consensus 29 ~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v--~~-~~~~~~~~~~-~~~~~~~-~~ 103 (147)
|...|.+++|+|+++.|++|+.||+|++ ||+++++.+.++.+|.....+..+ .. -..+++|+.+ .+.+|.. ..
T Consensus 153 h~~~v~~~~~~~~~~~l~t~s~D~~v~l--wd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~ 230 (354)
T 2pbi_B 153 HTNYLSACSFTNSDMQILTASGDGTCAL--WDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSG 230 (354)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSEEEE--EETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTC
T ss_pred cCCcEEEEEEeCCCCEEEEEeCCCcEEE--EeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence 3445889999999999999999999999 777888888899999865433222 21 1244444444 4544441 12
Q ss_pred eeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeee
Q 032092 104 RLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLK 145 (147)
Q Consensus 104 ~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~ 145 (147)
+....+.+| ..++|+|++++||+|+.|++|++||+++++.+.
T Consensus 231 ~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~ 276 (354)
T 2pbi_B 231 QCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVA 276 (354)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 333445555 579999999999999999999999998876543
No 24
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.85 E-value=4.4e-20 Score=139.46 Aligned_cols=143 Identities=13% Similarity=0.097 Sum_probs=104.0
Q ss_pred CeEeecCCeEEEEECCCCcc----ceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCC
Q 032092 1 MVVGTADRNLVVFNLQNPQT----EFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDG 76 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~----~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~ 76 (147)
|++|+.|++|++||+...+. ++..+. .|..+|.+++|+|+|++|++|+.||+|+| ||..+++...++.+|...
T Consensus 33 l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~dg~~l~s~s~D~~v~~--wd~~~~~~~~~~~~h~~~ 109 (319)
T 3frx_A 33 LLSASRDKTLISWKLTGDDQKFGVPVRSFK-GHSHIVQDCTLTADGAYALSASWDKTLRL--WDVATGETYQRFVGHKSD 109 (319)
T ss_dssp EEEEETTSEEEEEEEEEETTEEEEEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSEEEE--EETTTTEEEEEEECCSSC
T ss_pred EEEecCCccEEEecCCCCCccccccceEEe-CCcccEEEEEECCCCCEEEEEeCCCEEEE--EECCCCCeeEEEccCCCc
Confidence 58999999999999975432 223333 46678999999999999999999999999 788888888899999875
Q ss_pred ceEEe--eccceeeeecCCCcceeeeeeeeeeeeeece----EEEEEecC------CCeEEEeCCCCcEEEeecCCceee
Q 032092 77 SETCS--VISFTSILAGDAPKYSSFYKVKRLHLFVKSH----VIVLFVQI------HHTFATAGSDGAFNFWDKDSKQRL 144 (147)
Q Consensus 77 ~~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~fspd------g~~latg~~Dg~i~iWd~~~~~~~ 144 (147)
..... .....+++++.|..+++|..-.+....+.+| ..++|+|. +..|++|+.|+.|++||+++.+..
T Consensus 110 v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~ 189 (319)
T 3frx_A 110 VMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIE 189 (319)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhh
Confidence 43322 2332234444444555554322334455555 46889884 458999999999999999987765
Q ss_pred ec
Q 032092 145 KV 146 (147)
Q Consensus 145 ~~ 146 (147)
.+
T Consensus 190 ~~ 191 (319)
T 3frx_A 190 AD 191 (319)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 25
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.84 E-value=2.2e-20 Score=146.32 Aligned_cols=139 Identities=17% Similarity=0.178 Sum_probs=94.0
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEcc-CCCEEEEEeeCCeEEEEeecCCCCcceeEEEe-ccCC--
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFP-DQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKC-HRDG-- 76 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~sp-dg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~-h~~~-- 76 (147)
||+|+.||+|+|||+.+++........+|..+|++|+|+| ++++|++|+.||+|+| ||.+++. ...+.. |...
T Consensus 135 lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i--wd~~~~~-~~~~~~~~~~~~~ 211 (435)
T 4e54_B 135 VAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL--QDFKGNI-LRVFASSDTINIW 211 (435)
T ss_dssp EEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE--EETTSCE-EEEEECCSSCSCC
T ss_pred EEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE--eeccCCc-eeEEeccCCCCcc
Confidence 5899999999999999875432221235667899999999 6899999999999999 5665433 333332 3221
Q ss_pred --ceEEeeccceeeeecCCCcceeeeeee-eeeeeeece----EEEEEecCC-CeEEEeCCCCcEEEeecCCcee
Q 032092 77 --SETCSVISFTSILAGDAPKYSSFYKVK-RLHLFVKSH----VIVLFVQIH-HTFATAGSDGAFNFWDKDSKQR 143 (147)
Q Consensus 77 --~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~fspdg-~~latg~~Dg~i~iWd~~~~~~ 143 (147)
...+..+.. ++++|+.++...++++. +....+.+| ..++|+|++ .+|++|+.|+.|+|||+++.+.
T Consensus 212 ~~~~~~~~~~~-~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~ 285 (435)
T 4e54_B 212 FCSLDVSASSR-MVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRG 285 (435)
T ss_dssp CCCEEEETTTT-EEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCS
T ss_pred EEEEEECCCCC-EEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccc
Confidence 122333333 34555555433333333 333445555 579999998 4789999999999999987654
No 26
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.84 E-value=1.1e-19 Score=140.72 Aligned_cols=143 Identities=17% Similarity=0.092 Sum_probs=107.3
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETC 80 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~ 80 (147)
+++++.||.|++||+.+++. .......+..+|.+++|+|++++|++|+.||.|++ ||..+++...++.+|.......
T Consensus 106 l~~~~~d~~v~lw~~~~~~~-~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~i--wd~~~~~~~~~~~~~~~~v~~~ 182 (401)
T 4aez_A 106 VVAVALERNVYVWNADSGSV-SALAETDESTYVASVKWSHDGSFLSVGLGNGLVDI--YDVESQTKLRTMAGHQARVGCL 182 (401)
T ss_dssp EEEEEETTEEEEEETTTCCE-EEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEE--EETTTCCEEEEECCCSSCEEEE
T ss_pred EEEEECCCeEEEeeCCCCcE-eEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEE--EECcCCeEEEEecCCCCceEEE
Confidence 47889999999999999864 34444445668999999999999999999999999 7777788888888887754444
Q ss_pred eeccceeeeecCCCcceeeee--eeeeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 81 SVISFTSILAGDAPKYSSFYK--VKRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
..+.-.+++++.+..+.++.. .......+.+| ..++|+|++++|++|+.||.|++||+++++.+.+
T Consensus 183 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 254 (401)
T 4aez_A 183 SWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFT 254 (401)
T ss_dssp EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEE
T ss_pred EECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEE
Confidence 444443444455444444432 12334445555 5789999999999999999999999998877654
No 27
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.84 E-value=1.3e-20 Score=152.46 Aligned_cols=137 Identities=12% Similarity=0.063 Sum_probs=100.5
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEE--EEccCC-CEEEEEeeCCeEEEEeecCCCCcceeEEEeccCC-
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCV--AAFPDQ-QGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDG- 76 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~l--a~spdg-~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~- 76 (147)
|++|+.||+|++||+++++.+...+. .|..+|++| +|+|+| ++||+|+.||+|+| ||+++++...++.+|...
T Consensus 280 lasgs~DgtV~lWD~~~~~~~~~~~~-~H~~~V~sv~~~~s~~g~~~laS~S~D~tvkl--WD~~~~~~~~~~~~~~~~~ 356 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEVPSFYDQ-VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYI--FNPKDIATTKTTVSRFRGS 356 (524)
T ss_dssp EEEEETTSEEEEEETTBCSSCSEEEE-CSSSCEEEEEEECCTTSCCEEEEEETTSEEEE--ECGGGHHHHCEEEEECSCC
T ss_pred EEEEeCCCEEEEEECCCCCCceEEee-cccccEEEEEEEcCCCCCeEEEEeccCCeEEE--EECCCCCcccccccccccC
Confidence 68999999999999998755544343 456689999 578888 89999999999999 788877777778777531
Q ss_pred ---ceEEeeccceeeeecCCCcceeeeeee-eeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCC
Q 032092 77 ---SETCSVISFTSILAGDAPKYSSFYKVK-RLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDS 140 (147)
Q Consensus 77 ---~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~ 140 (147)
...+..+...+++++.+..++++..-. .....+.+| .+++|||+|++||+|+.||+|++||...
T Consensus 357 ~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 357 NLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp SCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred cccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 234555444445555555565554211 112334455 5799999999999999999999999754
No 28
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.84 E-value=1.7e-19 Score=134.85 Aligned_cols=142 Identities=15% Similarity=0.163 Sum_probs=104.2
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCce--
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE-- 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~-- 78 (147)
|++|+.||.|++||+++++. ...+. .+...|.+++|+|++++|++|+.||+|++ ||.++++....+..|.....
T Consensus 80 l~s~~~d~~i~vwd~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~i--wd~~~~~~~~~~~~~~~~v~~~ 155 (312)
T 4ery_A 80 LVSASDDKTLKIWDVSSGKC-LKTLK-GHSNYVFCCNFNPQSNLIVSGSFDESVRI--WDVKTGKCLKTLPAHSDPVSAV 155 (312)
T ss_dssp EEEEETTSEEEEEETTTCCE-EEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEE--EETTTCCEEEEECCCSSCEEEE
T ss_pred EEEECCCCEEEEEECCCCcE-EEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCcEEE--EECCCCEEEEEecCCCCcEEEE
Confidence 57899999999999999863 44443 35567999999999999999999999999 78787888888888876432
Q ss_pred EEeeccceeeeecCCCcceeeeeee-eeeeee-----eceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 79 TCSVISFTSILAGDAPKYSSFYKVK-RLHLFV-----KSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.+..+...+++++.+..++++.... +....+ .....++|+|++++|++|+.||.|++||+++++++.+
T Consensus 156 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 229 (312)
T 4ery_A 156 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 229 (312)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEE
T ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 3333333344445544555444211 111122 2234689999999999999999999999999887764
No 29
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.84 E-value=8.5e-20 Score=139.23 Aligned_cols=137 Identities=11% Similarity=0.097 Sum_probs=95.6
Q ss_pred CeEeecCCeEEEEECCCCcc-ceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCC-cceeEEEeccCCc-
Q 032092 1 MVVGTADRNLVVFNLQNPQT-EFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQ-SKNFTFKCHRDGS- 77 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~-~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~-~~~~~~~~h~~~~- 77 (147)
|++|+.|++|+|||+.+++. ....+ ..|..+|.+++|+|++++|++|+.||+|++|+++.... .....+.+|....
T Consensus 76 l~s~s~D~~v~iw~~~~~~~~~~~~~-~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~ 154 (345)
T 3fm0_A 76 LASASFDATTCIWKKNQDDFECVTTL-EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVK 154 (345)
T ss_dssp EEEEETTSCEEEEEECCC-EEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEE
T ss_pred EEEEECCCcEEEEEccCCCeEEEEEc-cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeE
Confidence 58999999999999987642 22333 34667899999999999999999999999955543211 2344566776543
Q ss_pred -eEEeeccceeeeecCCCcceeeeeee---eeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeec
Q 032092 78 -ETCSVISFTSILAGDAPKYSSFYKVK---RLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDK 138 (147)
Q Consensus 78 -~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~ 138 (147)
..+..+...+++++.|..++++.... .....+.+| .+++|+|+|++||+|+.|++|+|||.
T Consensus 155 ~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 155 HVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp EEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 23333443344445555555554322 123455666 57999999999999999999999996
No 30
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.84 E-value=6.8e-20 Score=149.52 Aligned_cols=142 Identities=13% Similarity=0.127 Sum_probs=100.1
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeC----CeEEEEeecCCCCcceeEEEeccCC
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIE----GRVGVHHLDDSQQSKNFTFKCHRDG 76 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~d----g~i~i~~~d~~~~~~~~~~~~h~~~ 76 (147)
||+|+.||+|+|||+.+++.........+..+|.+++|+|||+.|++++.+ ++|++ ||. ++...++.+|...
T Consensus 74 lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~--wd~--~~~~~~l~gh~~~ 149 (611)
T 1nr0_A 74 CASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFL--FDT--GTSNGNLTGQARA 149 (611)
T ss_dssp EEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEE--TTT--CCBCBCCCCCSSC
T ss_pred EEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEE--eeC--CCCcceecCCCCC
Confidence 689999999999999765432222122456689999999999999988865 36666 885 4566677888765
Q ss_pred ce--EEeeccceeeeecCCC-cceeeee-eeeeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 77 SE--TCSVISFTSILAGDAP-KYSSFYK-VKRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 77 ~~--~~~v~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.. .+....-..+++|++| .++++.. ..+....+.+| .+++|+|||++||||+.|++|++||..+++++.+
T Consensus 150 v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~ 227 (611)
T 1nr0_A 150 MNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGV 227 (611)
T ss_dssp EEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred ceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeee
Confidence 33 3333332234554444 5555541 12334456666 4799999999999999999999999998877654
No 31
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.84 E-value=1.5e-19 Score=147.48 Aligned_cols=142 Identities=10% Similarity=0.024 Sum_probs=101.4
Q ss_pred CeEeecCCeEEEEECCCCccceeEecC------CCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEecc
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINS------PLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHR 74 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~------~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~ 74 (147)
||+|+.|++|+|||+++++. ...+.. .|..+|.+++|+|||++|++|+.|++|+| ||.++++...++..+.
T Consensus 205 las~s~D~~i~lwd~~~g~~-~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~l--Wd~~~~~~~~~~~~~~ 281 (611)
T 1nr0_A 205 FASTGGDGTIVLYNGVDGTK-TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKI--WNVATLKVEKTIPVGT 281 (611)
T ss_dssp EEEEETTSCEEEEETTTCCE-EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEE--EETTTTEEEEEEECCS
T ss_pred EEEEECCCcEEEEECCCCcE-eeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEE--EeCCCCceeeeecCCC
Confidence 58999999999999998864 333322 46678999999999999999999999999 7777777777776432
Q ss_pred C---CceEEeeccceeeeecCCCcceeeeee-eeeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeee
Q 032092 75 D---GSETCSVISFTSILAGDAPKYSSFYKV-KRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLK 145 (147)
Q Consensus 75 ~---~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~ 145 (147)
. ...........+++++.+..++.+... .+....+.+| ..++|+|||++|++|+.|++|++||+.++++..
T Consensus 282 ~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 282 RIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNR 360 (611)
T ss_dssp SGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceee
Confidence 1 111111223333444555455544321 1233445566 579999999999999999999999999877654
No 32
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.84 E-value=1.6e-19 Score=140.69 Aligned_cols=138 Identities=14% Similarity=0.158 Sum_probs=102.2
Q ss_pred CeEeecCCeEEEEECCCCccceeEec-CCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRIN-SPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSET 79 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~-~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~ 79 (147)
||+| .|++|+|||+.+++. .+.+. ..+...|++|+|+|||++||+|+.||+|+| ||..+++.+.++.+|.....+
T Consensus 119 lAvg-ld~tV~lWd~~tg~~-~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~i--Wd~~~~~~~~~~~~h~~~v~~ 194 (420)
T 4gga_A 119 LAVA-LDNSVYLWSASSGDI-LQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQL--WDVQQQKRLRNMTSHSARVGS 194 (420)
T ss_dssp EEEE-ETTEEEEEETTTCCE-EEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEE--EETTTTEEEEEECCCSSCEEE
T ss_pred EEEE-eCCEEEEEECCCCCE-EEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEE--EEcCCCcEEEEEeCCCCceEE
Confidence 3454 599999999999864 33333 234557999999999999999999999999 777888888899999876555
Q ss_pred EeeccceeeeecCCCcceeeee--eeeeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCce
Q 032092 80 CSVISFTSILAGDAPKYSSFYK--VKRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQ 142 (147)
Q Consensus 80 ~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~ 142 (147)
...+...+++++.+..+..+.. .......+.+| ..+.|+|+|+++++++.|+.+++||..+++
T Consensus 195 ~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~ 263 (420)
T 4gga_A 195 LSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 263 (420)
T ss_dssp EEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCS
T ss_pred EeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecccc
Confidence 5555543344444444444331 12223445555 468999999999999999999999998764
No 33
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.84 E-value=1.6e-19 Score=134.97 Aligned_cols=139 Identities=14% Similarity=0.176 Sum_probs=94.9
Q ss_pred CeEeecCCeEEEEECCCCc-cceeEecCCCCcceEEEEEccC--CCEEEEEeeCCeEEEEeecCCCC--cceeEEEeccC
Q 032092 1 MVVGTADRNLVVFNLQNPQ-TEFKRINSPLKYQMRCVAAFPD--QQGFWVGSIEGRVGVHHLDDSQQ--SKNFTFKCHRD 75 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~-~~~~~~~~~~~~~i~~la~spd--g~~l~~g~~dg~i~i~~~d~~~~--~~~~~~~~h~~ 75 (147)
||+|+.|++|+|||+.... ++...+. .|..+|.+++|+|+ +++|++|+.||+|+| ||.+++ .....+.+|..
T Consensus 24 las~s~D~~v~iw~~~~~~~~~~~~l~-gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i--Wd~~~~~~~~~~~~~~h~~ 100 (297)
T 2pm7_B 24 MATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDGKVMI--WKEENGRWSQIAVHAVHSA 100 (297)
T ss_dssp EEEEETTSCEEEEEBCSSCBCCCEEEC-CCSSCEEEEEECCGGGCSEEEEEETTTEEEE--EEBSSSCBCCCEEECCCSS
T ss_pred EEEEeCCCEEEEEecCCCCcEEEEEEc-cccCCeEEEEecCCCcCCEEEEEcCCCEEEE--EEcCCCceEEEEEeecCCC
Confidence 6899999999999997542 2334443 56678999999864 899999999999999 555554 34556777766
Q ss_pred Cce--EEeec--cceeeeecCCCcceeeeeee--ee-eeeeece----EEEEEecC-------------CCeEEEeCCCC
Q 032092 76 GSE--TCSVI--SFTSILAGDAPKYSSFYKVK--RL-HLFVKSH----VIVLFVQI-------------HHTFATAGSDG 131 (147)
Q Consensus 76 ~~~--~~~v~--~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~----~~~~fspd-------------g~~latg~~Dg 131 (147)
... .+... ...+++++.|..++++..-. .. ...+.+| .+++|+|+ +++||+|+.|+
T Consensus 101 ~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~ 180 (297)
T 2pm7_B 101 SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 180 (297)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTS
T ss_pred ceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCC
Confidence 432 23222 22233444444455443211 11 2344555 57899997 57999999999
Q ss_pred cEEEeecCCce
Q 032092 132 AFNFWDKDSKQ 142 (147)
Q Consensus 132 ~i~iWd~~~~~ 142 (147)
+|+|||+++++
T Consensus 181 ~v~lwd~~~~~ 191 (297)
T 2pm7_B 181 LVKIWKYNSDA 191 (297)
T ss_dssp CEEEEEEETTT
T ss_pred cEEEEEEcCCC
Confidence 99999987654
No 34
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.84 E-value=7.2e-20 Score=140.62 Aligned_cols=141 Identities=18% Similarity=0.206 Sum_probs=100.1
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCC-EEEEEeeCCeEEEEeecCCCCcceeEEEeccCC--c
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQ-GFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDG--S 77 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~-~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~--~ 77 (147)
|++|+.||+|++||+++++. ...+. .+..+|++++|+|+++ .+++++.||+|++ ||.++++....+..+... .
T Consensus 154 l~sgs~dg~v~iwd~~~~~~-~~~~~-~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~--wd~~~~~~~~~~~~~~~~~~v 229 (357)
T 4g56_B 154 AVSGGKDFSVKVWDLSQKAV-LKSYN-AHSSEVNCVAACPGKDTIFLSCGEDGRILL--WDTRKPKPATRIDFCASDTIP 229 (357)
T ss_dssp EEEEETTSCEEEEETTTTEE-EEEEC-CCSSCEEEEEECTTCSSCEEEEETTSCEEE--CCTTSSSCBCBCCCTTCCSCE
T ss_pred EEEEeCCCeEEEEECCCCcE-EEEEc-CCCCCEEEEEEccCCCceeeeeccCCceEE--EECCCCceeeeeeeccccccc
Confidence 58999999999999999853 44443 4566899999999975 7899999999999 888777665544332221 1
Q ss_pred --eEEeeccceeeeecCCC-cceeeeeee--eeeeeeece----EEEEEecCC-CeEEEeCCCCcEEEeecCCceeeec
Q 032092 78 --ETCSVISFTSILAGDAP-KYSSFYKVK--RLHLFVKSH----VIVLFVQIH-HTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 78 --~~~~v~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~----~~~~fspdg-~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
..+....-.++++|+++ .++++. +. +....+.+| ..++|+|++ ++||||+.|++|+|||++++++++.
T Consensus 230 ~~v~~sp~~~~~la~g~~d~~i~~wd-~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 230 TSVTWHPEKDDTFACGDETGNVSLVN-IKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD 307 (357)
T ss_dssp EEEEECTTSTTEEEEEESSSCEEEEE-SSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE
T ss_pred cchhhhhcccceEEEeecccceeEEE-CCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE
Confidence 12322333345555555 444443 22 223344444 579999998 6899999999999999999988764
No 35
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.83 E-value=2.8e-19 Score=135.98 Aligned_cols=136 Identities=15% Similarity=0.212 Sum_probs=99.0
Q ss_pred CeEeecCCeEEEEECCCCcc------ceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEecc
Q 032092 1 MVVGTADRNLVVFNLQNPQT------EFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHR 74 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~------~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~ 74 (147)
|++|+.|++|+|||+.+.+. +...+ ..|..+|.+++|+|+++++++|+.||+|+| ||.++++...++.+|.
T Consensus 42 l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l-~~h~~~V~~~~~~~~~~~l~s~s~D~~v~l--wd~~~~~~~~~~~~h~ 118 (343)
T 2xzm_R 42 LISGSRDKTVMIWKLYEEEQNGYFGIPHKAL-TGHNHFVSDLALSQENCFAISSSWDKTLRL--WDLRTGTTYKRFVGHQ 118 (343)
T ss_dssp EEEEETTSCEEEEEECSSCCSSBSEEEEEEE-CCCSSCEEEEEECSSTTEEEEEETTSEEEE--EETTSSCEEEEEECCC
T ss_pred EEEEcCCCEEEEEECCcCCcccccccccchh-ccCCCceEEEEECCCCCEEEEEcCCCcEEE--EECCCCcEEEEEcCCC
Confidence 58999999999999986531 22223 346678999999999999999999999999 7888888888999998
Q ss_pred CCce--EEeeccceeeeecCCCcceeeeeeeeeeeee---ece----EEEEEecCC----------CeEEEeCCCCcEEE
Q 032092 75 DGSE--TCSVISFTSILAGDAPKYSSFYKVKRLHLFV---KSH----VIVLFVQIH----------HTFATAGSDGAFNF 135 (147)
Q Consensus 75 ~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~fspdg----------~~latg~~Dg~i~i 135 (147)
.... .+..+...++++|.|..+++|.......... .+| ..++|+|++ ++|++|+.||.|++
T Consensus 119 ~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i 198 (343)
T 2xzm_R 119 SEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKV 198 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEE
T ss_pred CcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEE
Confidence 7543 3334444445556555666554222111111 133 468999987 78999999999999
Q ss_pred eecC
Q 032092 136 WDKD 139 (147)
Q Consensus 136 Wd~~ 139 (147)
||..
T Consensus 199 wd~~ 202 (343)
T 2xzm_R 199 WNTN 202 (343)
T ss_dssp EETT
T ss_pred EcCC
Confidence 9953
No 36
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.83 E-value=3.3e-19 Score=135.19 Aligned_cols=140 Identities=11% Similarity=0.071 Sum_probs=93.9
Q ss_pred CeEeecCCeEEEEECCCCc------cceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCC--CCcceeEEEe
Q 032092 1 MVVGTADRNLVVFNLQNPQ------TEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDS--QQSKNFTFKC 72 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~------~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~--~~~~~~~~~~ 72 (147)
|++|+.|++|+|||+.... .+...+ ..|..+|.+++|+|+|++|++|+.||+|+||+.+.. ..+.+..+.+
T Consensus 73 las~s~D~~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~ 151 (330)
T 2hes_X 73 LAAGSFDSTVSIWAKEESADRTFEMDLLAII-EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQE 151 (330)
T ss_dssp EEEEETTSCEEEEEC-------CCCEEEEEE-C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECC
T ss_pred EEEEeCCCcEEEEEcccCcCccccceeEEEE-cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEecc
Confidence 5899999999999996431 122223 346678999999999999999999999999544221 1234566778
Q ss_pred ccCCce--EEeeccceeeeecCCCcceeeeeee---eeeeeeece----EEEEEecC--CCeEEEeCCCCcEEEeecCCc
Q 032092 73 HRDGSE--TCSVISFTSILAGDAPKYSSFYKVK---RLHLFVKSH----VIVLFVQI--HHTFATAGSDGAFNFWDKDSK 141 (147)
Q Consensus 73 h~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~fspd--g~~latg~~Dg~i~iWd~~~~ 141 (147)
|..... .+..+...++++|.|..++++.... +....+.+| ..++|+|+ +.+|++|+.|++|++||++++
T Consensus 152 h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 152 HSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 876532 3434444344555555666654321 334566676 46899998 678999999999999998654
No 37
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.83 E-value=4.3e-19 Score=131.82 Aligned_cols=58 Identities=12% Similarity=0.114 Sum_probs=46.9
Q ss_pred CeEeecCCeEEEEECCCCcc--------ceeEecCCCCcceEEEEEccC--CCEEEEEeeCCeEEEEee
Q 032092 1 MVVGTADRNLVVFNLQNPQT--------EFKRINSPLKYQMRCVAAFPD--QQGFWVGSIEGRVGVHHL 59 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~--------~~~~~~~~~~~~i~~la~spd--g~~l~~g~~dg~i~i~~~ 59 (147)
|++|+.||.|++||+++++. +...+. .+..+|.+++|+|+ +++|++|+.||.|++|+.
T Consensus 74 l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~ 141 (351)
T 3f3f_A 74 IASASYDKTVKLWEEDPDQEECSGRRWNKLCTLN-DSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDA 141 (351)
T ss_dssp EEEEETTSCEEEEEECTTSCTTSSCSEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTCEEEEEEC
T ss_pred EEEEcCCCeEEEEecCCCcccccccCcceeeeec-ccCCceeEEEEcCCCCCcEEEEecCCCcEEEecC
Confidence 58899999999999998642 223332 45568999999999 999999999999999443
No 38
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.83 E-value=3.7e-20 Score=142.72 Aligned_cols=102 Identities=8% Similarity=0.074 Sum_probs=82.7
Q ss_pred CeEeecCC----eEEEEECCCCccce---eEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEE-Ee
Q 032092 1 MVVGTADR----NLVVFNLQNPQTEF---KRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTF-KC 72 (147)
Q Consensus 1 l~~gs~dg----~v~iwdi~~~~~~~---~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~-~~ 72 (147)
|++++.|+ .+++||+....... ..+. .+..+|++++|||||++||+|+.||+|+| ||.++++.+.++ .+
T Consensus 234 l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~V~~~~~Spdg~~lasgs~D~~V~i--wd~~~~~~~~~~~~g 310 (365)
T 4h5i_A 234 LIAASLKKGKGIVLTKISIKSGNTSVLRSKQVT-NRFKGITSMDVDMKGELAVLASNDNSIAL--VKLKDLSMSKIFKQA 310 (365)
T ss_dssp EEEEEESSSCCEEEEEEEEETTEEEEEEEEEEE-SSCSCEEEEEECTTSCEEEEEETTSCEEE--EETTTTEEEEEETTS
T ss_pred EEEEecCCcceeEEeecccccceecceeeeeec-CCCCCeEeEEECCCCCceEEEcCCCEEEE--EECCCCcEEEEecCc
Confidence 46777776 68899998764321 1122 34567999999999999999999999999 788888888776 57
Q ss_pred ccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCC
Q 032092 73 HRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDS 140 (147)
Q Consensus 73 h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~ 140 (147)
|.. +|+++ +|||||++|||||.|++|+|||+.+
T Consensus 311 H~~-----~V~~v------------------------------~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 311 HSF-----AITEV------------------------------TISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp SSS-----CEEEE------------------------------EECTTSCEEEEEETTSEEEEEECCT
T ss_pred ccC-----CEEEE------------------------------EECCCCCEEEEEeCCCeEEEEEcCC
Confidence 875 47777 9999999999999999999999854
No 39
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.82 E-value=4.7e-20 Score=140.14 Aligned_cols=106 Identities=8% Similarity=0.030 Sum_probs=86.9
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcce-eEEEe-ccCCce
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKN-FTFKC-HRDGSE 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~-~~~~~-h~~~~~ 78 (147)
|++|+.||+|++||+++++. .......+..++.+++|+|||++|++|+.||.|+| ||.++++.. .++.+ |..
T Consensus 142 l~s~s~dg~i~~wd~~~~~~-~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~i--wd~~~~~~~~~~~~~~h~~--- 215 (343)
T 3lrv_A 142 FIWADNRGTIGFQSYEDDSQ-YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDV--YNLSSPDQASSRFPVDEEA--- 215 (343)
T ss_dssp EEEEETTCCEEEEESSSSCE-EEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEE--EESSCTTSCCEECCCCTTS---
T ss_pred EEEEeCCCcEEEEECCCCcE-EEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEE--EECCCCCCCccEEeccCCC---
Confidence 57899999999999999864 33333344457999999999999999999999999 777777766 67776 764
Q ss_pred EEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceeee
Q 032092 79 TCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLK 145 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~ 145 (147)
++.++ +|+|+|++|++|+ |+.|++||+++++.++
T Consensus 216 --~v~~l------------------------------~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~ 249 (343)
T 3lrv_A 216 --KIKEV------------------------------KFADNGYWMVVEC-DQTVVCFDLRKDVGTL 249 (343)
T ss_dssp --CEEEE------------------------------EECTTSSEEEEEE-SSBEEEEETTSSTTCB
T ss_pred --CEEEE------------------------------EEeCCCCEEEEEe-CCeEEEEEcCCCCcce
Confidence 46666 9999999999999 5599999999886654
No 40
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.82 E-value=9.2e-20 Score=140.60 Aligned_cols=107 Identities=15% Similarity=0.281 Sum_probs=91.7
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETC 80 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~ 80 (147)
|++|+.||.|++||+++++. .. ....+..+|++++|+|++++|++|+.||+|++ ||.++++...++.+|..
T Consensus 112 l~~~~~dg~i~iwd~~~~~~-~~-~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~i--wd~~~~~~~~~~~~h~~----- 182 (420)
T 3vl1_A 112 FILGTTEGDIKVLDSNFNLQ-RE-IDQAHVSEITKLKFFPSGEALISSSQDMQLKI--WSVKDGSNPRTLIGHRA----- 182 (420)
T ss_dssp EEEEETTSCEEEECTTSCEE-EE-ETTSSSSCEEEEEECTTSSEEEEEETTSEEEE--EETTTCCCCEEEECCSS-----
T ss_pred EEEEECCCCEEEEeCCCcce-ee-ecccccCccEEEEECCCCCEEEEEeCCCeEEE--EeCCCCcCceEEcCCCC-----
Confidence 58899999999999998753 33 32356678999999999999999999999999 77777888888888875
Q ss_pred eeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 81 SVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.+.++ +|+|++++|++|+.||.|++||+++++.+.+
T Consensus 183 ~v~~~------------------------------~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 218 (420)
T 3vl1_A 183 TVTDI------------------------------AIIDRGRNVLSASLDGTIRLWECGTGTTIHT 218 (420)
T ss_dssp CEEEE------------------------------EEETTTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cEEEE------------------------------EEcCCCCEEEEEcCCCcEEEeECCCCceeEE
Confidence 36666 9999999999999999999999999888765
No 41
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.82 E-value=2.6e-19 Score=143.29 Aligned_cols=131 Identities=20% Similarity=0.197 Sum_probs=98.1
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCce--
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE-- 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~-- 78 (147)
|++|+.|++|++||+... ....+. .+..+|++++|+||+++|++++.|++|++ ||. +++.+.++.+|.....
T Consensus 441 l~~~~~d~~v~~w~~~~~--~~~~~~-~~~~~v~~~~~spd~~~las~~~d~~i~i--w~~-~~~~~~~~~~h~~~v~~l 514 (577)
T 2ymu_A 441 IASASDDKTVKLWNRNGQ--LLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKL--WNR-NGQLLQTLTGHSSSVRGV 514 (577)
T ss_dssp EEEEETTSEEEEEETTSC--EEEEEE-CCSSCEEEEEECTTSCEEEEEETTSEEEE--EET-TSCEEEEEECCSSCEEEE
T ss_pred EEEEcCCCEEEEEECCCC--EEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCEEEE--EcC-CCCEEEEEeCCCCCEEEE
Confidence 578999999999997543 233443 45668999999999999999999999999 564 5778889999987532
Q ss_pred EEeeccceeeeecCCCcceeeeeeeeeeeeeece----EEEEEecCCCeEEEeCCCCcEEEee
Q 032092 79 TCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWD 137 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd 137 (147)
++..+...+++++.|..+++|..-.+....+.+| ..++|+|||++|+||+.|++|++||
T Consensus 515 ~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 515 AFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 3444444344445555566555222344556666 4799999999999999999999998
No 42
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.82 E-value=3.3e-20 Score=145.37 Aligned_cols=140 Identities=8% Similarity=0.067 Sum_probs=97.0
Q ss_pred CeEeecCCeEEEEECCCCccceeEecC--CCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCce
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINS--PLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~--~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~ 78 (147)
|++|+.||+|+|||+++... ..+.. .....+.+++|+|++++|++|+.||+|++ ||.+ ++.+.++.+|.....
T Consensus 180 l~s~s~D~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~--wd~~-~~~~~~~~~h~~~v~ 254 (435)
T 4e54_B 180 FYASSMEGTTRLQDFKGNIL--RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVIL--LNMD-GKELWNLRMHKKKVT 254 (435)
T ss_dssp EEEECSSSCEEEEETTSCEE--EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEE--EESS-SCBCCCSBCCSSCEE
T ss_pred EEEEeCCCEEEEeeccCCce--eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEee--eccC-cceeEEEecccceEE
Confidence 58999999999999987632 22222 22345789999999999999999999999 5654 456677788876533
Q ss_pred E--EeeccceeeeecCCC-cceeee--eee--eeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeee
Q 032092 79 T--CSVISFTSILAGDAP-KYSSFY--KVK--RLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLK 145 (147)
Q Consensus 79 ~--~~v~~~~~~~~~~~~-~~~~~~--~~~--~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~ 145 (147)
. +....-.++++|+.+ .+++|. ..+ .......+| .+++|+|+|++|+||+.||.|+|||+.++++..
T Consensus 255 ~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~ 332 (435)
T 4e54_B 255 HVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPL 332 (435)
T ss_dssp EEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEE
T ss_pred eeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccce
Confidence 2 222332345555544 444443 111 112223344 578999999999999999999999998876543
No 43
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.82 E-value=1.4e-19 Score=139.70 Aligned_cols=108 Identities=19% Similarity=0.313 Sum_probs=89.0
Q ss_pred CeEeecCCeEEEEECCCCccceeEec----CCCCcceEEEEEcc-CCCEEEEEeeCCeEEEEeecCC-CCcceeEEEecc
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRIN----SPLKYQMRCVAAFP-DQQGFWVGSIEGRVGVHHLDDS-QQSKNFTFKCHR 74 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~----~~~~~~i~~la~sp-dg~~l~~g~~dg~i~i~~~d~~-~~~~~~~~~~h~ 74 (147)
|++|+.|++|++||+++++. ...+. ..+...|.+++++| ++++|++|+.||+|++ ||.+ .++...++.+|.
T Consensus 173 l~s~s~D~~i~~wd~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~--wd~~~~~~~~~~~~~h~ 249 (380)
T 3iz6_a 173 LITGSGDQTCVLWDVTTGQR-ISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRL--WDLRITSRAVRTYHGHE 249 (380)
T ss_dssp EEEECTTSCEEEECTTTCCE-EEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEE--EETTTTCCCCEEECCCS
T ss_pred EEEECCCCcEEEEEcCCCcE-EEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEE--EECCCCCcceEEECCcC
Confidence 57999999999999999864 33331 23556799999987 7899999999999999 6665 346677788887
Q ss_pred CCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 75 DGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 75 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
. .++++ +|+|+|++|+||+.||+|++||+++++.+.+
T Consensus 250 ~-----~v~~v------------------------------~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 250 G-----DINSV------------------------------KFFPDGQRFGTGSDDGTCRLFDMRTGHQLQV 286 (380)
T ss_dssp S-----CCCEE------------------------------EECTTSSEEEEECSSSCEEEEETTTTEEEEE
T ss_pred C-----CeEEE------------------------------EEecCCCeEEEEcCCCeEEEEECCCCcEEEE
Confidence 5 46776 9999999999999999999999999887654
No 44
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.82 E-value=5.2e-19 Score=136.28 Aligned_cols=139 Identities=8% Similarity=-0.113 Sum_probs=90.1
Q ss_pred eEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEE--EeccCC--c
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTF--KCHRDG--S 77 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~--~~h~~~--~ 77 (147)
|+|+.|++|+|||+++++. ...+. +..+|.+|+|+|||+++++++.++. .+ |+..+++..... .+|... .
T Consensus 151 as~~~d~~i~iwd~~~~~~-~~~~~--~~~~V~~v~fspdg~~l~s~s~~~~-~~--~~~~~~~~~~~~~~~~~~~~v~~ 224 (365)
T 4h5i_A 151 ASSKVPAIMRIIDPSDLTE-KFEIE--TRGEVKDLHFSTDGKVVAYITGSSL-EV--ISTVTGSCIARKTDFDKNWSLSK 224 (365)
T ss_dssp EESCSSCEEEEEETTTTEE-EEEEE--CSSCCCEEEECTTSSEEEEECSSCE-EE--EETTTCCEEEEECCCCTTEEEEE
T ss_pred EECCCCCEEEEeECCCCcE-EEEeC--CCCceEEEEEccCCceEEeccceeE-EE--EEeccCcceeeeecCCCCCCEEE
Confidence 3456799999999999864 34443 3457999999999999999986654 45 344444443322 334332 1
Q ss_pred eEEeeccceeeeecCCCc---ceeeeeee----ee--eeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceee
Q 032092 78 ETCSVISFTSILAGDAPK---YSSFYKVK----RL--HLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRL 144 (147)
Q Consensus 78 ~~~~v~~~~~~~~~~~~~---~~~~~~~~----~~--~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~ 144 (147)
..+..+...+++++.+.. ....+++. .. ...+.+| .+++|+|||++||+|+.|++|+|||+++++++
T Consensus 225 v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 225 INFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMS 304 (365)
T ss_dssp EEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEE
Confidence 234444444444444442 11122221 11 1233443 67999999999999999999999999999988
Q ss_pred ec
Q 032092 145 KV 146 (147)
Q Consensus 145 ~~ 146 (147)
++
T Consensus 305 ~~ 306 (365)
T 4h5i_A 305 KI 306 (365)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 45
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.82 E-value=3.5e-19 Score=146.84 Aligned_cols=140 Identities=18% Similarity=0.225 Sum_probs=99.1
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEE----EeccCC
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTF----KCHRDG 76 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~----~~h~~~ 76 (147)
|++|+.||+|+|||+++++. ...+. .|..+|.+++|+|++++|++|+.|++|+| ||.... ....+ .+|...
T Consensus 445 l~sgs~Dg~v~vwd~~~~~~-~~~~~-~h~~~v~~~~~s~~~~~l~s~s~D~~i~i--wd~~~~-~~~~~~~~~~~h~~~ 519 (694)
T 3dm0_A 445 ALSGSWDGELRLWDLAAGVS-TRRFV-GHTKDVLSVAFSLDNRQIVSASRDRTIKL--WNTLGE-CKYTISEGGEGHRDW 519 (694)
T ss_dssp EEEEETTSEEEEEETTTTEE-EEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEE--ECTTSC-EEEEECSSTTSCSSC
T ss_pred EEEEeCCCcEEEEECCCCcc-eeEEe-CCCCCEEEEEEeCCCCEEEEEeCCCEEEE--EECCCC-cceeeccCCCCCCCc
Confidence 58999999999999999854 34443 46678999999999999999999999999 666432 22222 235443
Q ss_pred ce--EEeeccc-eeeee-cCCCcceeeeeee--eeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 77 SE--TCSVISF-TSILA-GDAPKYSSFYKVK--RLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 77 ~~--~~~v~~~-~~~~~-~~~~~~~~~~~~~--~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.. .+..+.. ..+++ +.|..++++. +. +....+.+| ..++|+|+|++|++|+.||.|+|||+++++++++
T Consensus 520 v~~~~~~~~~~~~~l~s~s~d~~v~vwd-~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~ 598 (694)
T 3dm0_A 520 VSCVRFSPNTLQPTIVSASWDKTVKVWN-LSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYS 598 (694)
T ss_dssp EEEEEECSCSSSCEEEEEETTSCEEEEE-TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEEC
T ss_pred EEEEEEeCCCCcceEEEEeCCCeEEEEE-CCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 22 2222221 23444 4444555544 32 233455666 4799999999999999999999999999988765
No 46
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.82 E-value=1.2e-19 Score=136.96 Aligned_cols=137 Identities=14% Similarity=0.178 Sum_probs=95.4
Q ss_pred CeEeecCCeEEEEECCCCcc-ceeEecCCCCcceEEEEEcc--CCCEEEEEeeCCeEEEEeecCCCC--cceeEEEeccC
Q 032092 1 MVVGTADRNLVVFNLQNPQT-EFKRINSPLKYQMRCVAAFP--DQQGFWVGSIEGRVGVHHLDDSQQ--SKNFTFKCHRD 75 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~-~~~~~~~~~~~~i~~la~sp--dg~~l~~g~~dg~i~i~~~d~~~~--~~~~~~~~h~~ 75 (147)
||+|+.|++|+|||+++++. ....+. .|..+|.+++|+| ++++|++|+.|++|+| ||.+++ +...++.+|..
T Consensus 28 lasgs~D~~v~lwd~~~~~~~~~~~l~-gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i--Wd~~~~~~~~~~~~~~h~~ 104 (316)
T 3bg1_A 28 LATCSSDRSVKIFDVRNGGQILIADLR-GHEGPVWQVAWAHPMYGNILASCSYDRKVII--WREENGTWEKSHEHAGHDS 104 (316)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEEE-CCSSCEEEEEECCGGGSSCEEEEETTSCEEE--ECCSSSCCCEEEEECCCSS
T ss_pred EEEEeCCCeEEEEEecCCCcEEEEEEc-CCCccEEEEEeCCCCCCCEEEEEECCCEEEE--EECCCCcceEEEEccCCCC
Confidence 68999999999999988642 233333 4667899999986 4899999999999999 676655 34566778876
Q ss_pred Cce--EEeecc-ceeeeecCCC-cceeeeeeee-----eeeeeece----EEEEEecC-----------------CCeEE
Q 032092 76 GSE--TCSVIS-FTSILAGDAP-KYSSFYKVKR-----LHLFVKSH----VIVLFVQI-----------------HHTFA 125 (147)
Q Consensus 76 ~~~--~~~v~~-~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~----~~~~fspd-----------------g~~la 125 (147)
... .+.... -.++++|+.+ .++++. +.. ....+.+| ..++|+|+ +++||
T Consensus 105 ~V~~v~~~p~~~g~~lasgs~D~~i~lwd-~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 183 (316)
T 3bg1_A 105 SVNSVCWAPHDYGLILACGSSDGAISLLT-YTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFA 183 (316)
T ss_dssp CCCEEEECCTTTCSCEEEECSSSCEEEEE-ECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEE
T ss_pred ceEEEEECCCCCCcEEEEEcCCCCEEEEe-cCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEE
Confidence 432 333331 1245555555 444443 221 12233445 46899998 47999
Q ss_pred EeCCCCcEEEeecCCc
Q 032092 126 TAGSDGAFNFWDKDSK 141 (147)
Q Consensus 126 tg~~Dg~i~iWd~~~~ 141 (147)
+|+.|++|++||+++.
T Consensus 184 sgs~D~~v~lWd~~~~ 199 (316)
T 3bg1_A 184 SGGCDNLIKLWKEEED 199 (316)
T ss_dssp CCBTTSBCCEEEECTT
T ss_pred EecCCCeEEEEEeCCC
Confidence 9999999999999754
No 47
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.81 E-value=9.1e-19 Score=137.12 Aligned_cols=140 Identities=11% Similarity=0.144 Sum_probs=104.6
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETC 80 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~ 80 (147)
|++|+.||.|++||+++++. ...+. .+..+|.+++|+|+++++++|+.||+|++ ||.++++.+.++.+|.......
T Consensus 283 l~~~~~d~~i~vwd~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~l~sg~~dg~i~v--wd~~~~~~~~~~~~h~~~v~~~ 358 (464)
T 3v7d_B 283 VVSGSYDNTLIVWDVAQMKC-LYILS-GHTDRIYSTIYDHERKRCISASMDTTIRI--WDLENGELMYTLQGHTALVGLL 358 (464)
T ss_dssp EEEEETTSCEEEEETTTTEE-EEEEC-CCSSCEEEEEEETTTTEEEEEETTSCEEE--EETTTTEEEEEECCCSSCEEEE
T ss_pred EEEEeCCCeEEEEECCCCcE-EEEec-CCCCCEEEEEEcCCCCEEEEEeCCCcEEE--EECCCCcEEEEEeCCCCcEEEE
Confidence 57899999999999998853 44443 45668999999999999999999999999 7888888889999888764444
Q ss_pred eeccceeeeecCCCcceeeeeeeeeeeee---ec--eEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 81 SVISFTSILAGDAPKYSSFYKVKRLHLFV---KS--HVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
....-.+++++.|..++++. +....... .. ...++|+|++++|++|+ ||.|++||+++++++++
T Consensus 359 ~~~~~~l~s~s~dg~v~vwd-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 359 RLSDKFLVSAAADGSIRGWD-ANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp EECSSEEEEEETTSEEEEEE-TTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEES
T ss_pred EEcCCEEEEEeCCCcEEEEE-CCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEeh
Confidence 44443344445544555444 32211111 11 13579999999999998 99999999999998875
No 48
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.81 E-value=1.8e-19 Score=135.87 Aligned_cols=137 Identities=14% Similarity=0.185 Sum_probs=92.0
Q ss_pred CeEeecCCeEEEEECCCCcc-ceeEecCCCCcceEEEEEccC--CCEEEEEeeCCeEEEEeecCCCCcc---eeEEEecc
Q 032092 1 MVVGTADRNLVVFNLQNPQT-EFKRINSPLKYQMRCVAAFPD--QQGFWVGSIEGRVGVHHLDDSQQSK---NFTFKCHR 74 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~-~~~~~~~~~~~~i~~la~spd--g~~l~~g~~dg~i~i~~~d~~~~~~---~~~~~~h~ 74 (147)
|++|+.|++|+|||+++++. ....+ ..|..+|++++|+|+ +.+|++|+.||+|++|++ +.+.. ...+.+|.
T Consensus 74 l~s~s~D~~v~iWd~~~~~~~~~~~~-~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~--~~~~~~~~~~~~~~h~ 150 (316)
T 3bg1_A 74 LASCSYDRKVIIWREENGTWEKSHEH-AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTY--TGEGQWEVKKINNAHT 150 (316)
T ss_dssp EEEEETTSCEEEECCSSSCCCEEEEE-CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEE--CSSSCEEECCBTTSSS
T ss_pred EEEEECCCEEEEEECCCCcceEEEEc-cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEec--CCCCCcceeeeecccc
Confidence 58999999999999998642 22233 245668999999998 789999999999999544 43321 22334554
Q ss_pred CCc--eEEeecc----------------ceeeeecCCC-cceeeeeee----eeeeeeece----EEEEEecCC----Ce
Q 032092 75 DGS--ETCSVIS----------------FTSILAGDAP-KYSSFYKVK----RLHLFVKSH----VIVLFVQIH----HT 123 (147)
Q Consensus 75 ~~~--~~~~v~~----------------~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~----~~~~fspdg----~~ 123 (147)
... ..+.... ...+++|+.| .++++.... +....+.+| ..++|+|++ ++
T Consensus 151 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~ 230 (316)
T 3bg1_A 151 IGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230 (316)
T ss_dssp SCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCE
T ss_pred CCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCce
Confidence 421 1222211 1245555555 455544211 233456666 479999987 88
Q ss_pred EEEeCCCCcEEEeecCC
Q 032092 124 FATAGSDGAFNFWDKDS 140 (147)
Q Consensus 124 latg~~Dg~i~iWd~~~ 140 (147)
||+|+.||+|+|||+++
T Consensus 231 las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 231 IASCSQDGRVFIWTCDD 247 (316)
T ss_dssp EEEEETTCEEEEEECSS
T ss_pred EEEEcCCCeEEEEEccC
Confidence 99999999999999876
No 49
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.81 E-value=1.8e-19 Score=138.19 Aligned_cols=100 Identities=11% Similarity=0.074 Sum_probs=82.8
Q ss_pred eecCCeEEEEECCCCcc--------------c-eeEecCCCCcceEEEEEccCCCEEEEEeeCCe-EEEEeecCCCCcce
Q 032092 4 GTADRNLVVFNLQNPQT--------------E-FKRINSPLKYQMRCVAAFPDQQGFWVGSIEGR-VGVHHLDDSQQSKN 67 (147)
Q Consensus 4 gs~dg~v~iwdi~~~~~--------------~-~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~-i~i~~~d~~~~~~~ 67 (147)
|+.||.|++||+++++. + ...+ ..|..+|++++|+|||++||+|+.||+ |+| ||.++++.+
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~-~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~i--wd~~~~~~~ 231 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI-KAHTNPIKMVRLNRKSDMVATCSQDGTIIRV--FKTEDGVLV 231 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEE-CCCSSCEEEEEECTTSSEEEEEETTCSEEEE--EETTTCCEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEE-EccCCceEEEEECCCCCEEEEEeCCCCEEEE--EECCCCcEE
Confidence 68899999999998641 1 2333 356678999999999999999999998 999 788888888
Q ss_pred eEEE-e-ccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCc
Q 032092 68 FTFK-C-HRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSK 141 (147)
Q Consensus 68 ~~~~-~-h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~ 141 (147)
.++. + |.. ++.++ +|+|+|++|++|+.|++|+|||+++.
T Consensus 232 ~~~~~g~h~~-----~v~~~------------------------------~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 232 REFRRGLDRA-----DVVDM------------------------------KWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEECTTCCS-----CEEEE------------------------------EECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEEcCCCCC-----cEEEE------------------------------EECCCCCEEEEEECCCEEEEEEccCC
Confidence 8887 5 664 46666 99999999999999999999999764
No 50
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.81 E-value=1.1e-18 Score=135.09 Aligned_cols=140 Identities=19% Similarity=0.239 Sum_probs=99.9
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEcc-CCCEEEEEeeCCeEEEEeecCCCCcceeEE-------Ee
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFP-DQQGFWVGSIEGRVGVHHLDDSQQSKNFTF-------KC 72 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~sp-dg~~l~~g~~dg~i~i~~~d~~~~~~~~~~-------~~ 72 (147)
|++|+.|++|++||+++++. ...+. +...+.+++|+| ++++|++|+.||+|++ ||.++++....+ .+
T Consensus 180 l~s~s~d~~v~iwd~~~~~~-~~~~~--~~~~v~~~~~~~~~~~~l~~~s~d~~v~i--wd~~~~~~~~~~~~~~~~~~~ 254 (393)
T 1erj_A 180 LVSGSGDRTVRIWDLRTGQC-SLTLS--IEDGVTTVAVSPGDGKYIAAGSLDRAVRV--WDSETGFLVERLDSENESGTG 254 (393)
T ss_dssp EEEEETTSEEEEEETTTTEE-EEEEE--CSSCEEEEEECSTTCCEEEEEETTSCEEE--EETTTCCEEEEEC------CC
T ss_pred EEEecCCCcEEEEECCCCee-EEEEE--cCCCcEEEEEECCCCCEEEEEcCCCcEEE--EECCCCcEEEeecccccCCCC
Confidence 57899999999999999864 23333 234689999999 8999999999999999 777777666555 35
Q ss_pred ccCCce--EEeeccceeeeecCCCcceeeeeee--------------eeeeeeece----EEEEEecCCCeEEEeCCCCc
Q 032092 73 HRDGSE--TCSVISFTSILAGDAPKYSSFYKVK--------------RLHLFVKSH----VIVLFVQIHHTFATAGSDGA 132 (147)
Q Consensus 73 h~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~----~~~~fspdg~~latg~~Dg~ 132 (147)
|..... .+..+...+++++.|..+++|. +. .....+.+| .+++|+|++++|++|+.|+.
T Consensus 255 h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd-~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~ 333 (393)
T 1erj_A 255 HKDSVYSVVFTRDGQSVVSGSLDRSVKLWN-LQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG 333 (393)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEE-C---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCEEEEEE-CCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCe
Confidence 554322 3333333334444444454443 21 112344555 47999999999999999999
Q ss_pred EEEeecCCceeeec
Q 032092 133 FNFWDKDSKQRLKV 146 (147)
Q Consensus 133 i~iWd~~~~~~~~~ 146 (147)
|++||.++++.+.+
T Consensus 334 v~iwd~~~~~~~~~ 347 (393)
T 1erj_A 334 VLFWDKKSGNPLLM 347 (393)
T ss_dssp EEEEETTTCCEEEE
T ss_pred EEEEECCCCeEEEE
Confidence 99999999887654
No 51
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.81 E-value=1.7e-19 Score=137.49 Aligned_cols=139 Identities=17% Similarity=0.077 Sum_probs=90.2
Q ss_pred CeEeecCCeEEEEECCCCc--cceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCc---ceeEEEe-cc
Q 032092 1 MVVGTADRNLVVFNLQNPQ--TEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQS---KNFTFKC-HR 74 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~--~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~---~~~~~~~-h~ 74 (147)
|++|+.||+|++||+.+++ .+...+ ..+..+|.+++|+|++++|++|+.||+|++ ||.++++ ....+.+ |.
T Consensus 70 l~s~s~d~~v~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i--wd~~~~~~~~~~~~~~~~h~ 146 (377)
T 3dwl_C 70 IVTCSQDRNAYVYEKRPDGTWKQTLVL-LRLNRAATFVRWSPNEDKFAVGSGARVISV--CYFEQENDWWVSKHLKRPLR 146 (377)
T ss_dssp EEEEETTSSEEEC------CCCCEEEC-CCCSSCEEEEECCTTSSCCEEEESSSCEEE--CCC-----CCCCEEECSSCC
T ss_pred EEEEeCCCeEEEEEcCCCCceeeeeEe-cccCCceEEEEECCCCCEEEEEecCCeEEE--EEECCcccceeeeEeecccC
Confidence 5889999999999999875 122222 245668999999999999999999999999 6666554 3566666 76
Q ss_pred CCce--EEeeccceeeeecCCCcceeeee-------------------eeeeeeeeece----EEEEEecCCCeEEEeCC
Q 032092 75 DGSE--TCSVISFTSILAGDAPKYSSFYK-------------------VKRLHLFVKSH----VIVLFVQIHHTFATAGS 129 (147)
Q Consensus 75 ~~~~--~~~v~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~----~~~~fspdg~~latg~~ 129 (147)
.... .+..+...+++++.|..++++.. ..+....+ +| ..++|+|+|++|++|+.
T Consensus 147 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~ 225 (377)
T 3dwl_C 147 STILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGH 225 (377)
T ss_dssp SCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEET
T ss_pred CCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeC
Confidence 5433 23333333344444444544442 12223333 54 57999999999999999
Q ss_pred CCcEEEeecCCcee
Q 032092 130 DGAFNFWDKDSKQR 143 (147)
Q Consensus 130 Dg~i~iWd~~~~~~ 143 (147)
||.|++||+++++.
T Consensus 226 d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 226 DSSVTIAYPSAPEQ 239 (377)
T ss_dssp TTEEC-CEECSTTS
T ss_pred CCcEEEEECCCCCC
Confidence 99999999998765
No 52
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.81 E-value=8.4e-19 Score=135.84 Aligned_cols=137 Identities=17% Similarity=0.238 Sum_probs=92.8
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCC-ceE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDG-SET 79 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~-~~~ 79 (147)
|++|+.||+|+|||+.+++. ...+. .|..+|.+++|+|++++|++|+.||+|++ ||.++++...++..+... ...
T Consensus 138 l~s~~~d~~i~iwd~~~~~~-~~~~~-~h~~~v~~~~~~p~~~~l~s~s~d~~v~i--wd~~~~~~~~~~~~~~~v~~~~ 213 (393)
T 1erj_A 138 LATGAEDRLIRIWDIENRKI-VMILQ-GHEQDIYSLDYFPSGDKLVSGSGDRTVRI--WDLRTGQCSLTLSIEDGVTTVA 213 (393)
T ss_dssp EEEEETTSCEEEEETTTTEE-EEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEE--EETTTTEEEEEEECSSCEEEEE
T ss_pred EEEEcCCCeEEEEECCCCcE-EEEEc-cCCCCEEEEEEcCCCCEEEEecCCCcEEE--EECCCCeeEEEEEcCCCcEEEE
Confidence 58899999999999998753 34443 46678999999999999999999999999 777777766666533221 112
Q ss_pred EeeccceeeeecCCC-cceeeee-----eeee---eeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCc
Q 032092 80 CSVISFTSILAGDAP-KYSSFYK-----VKRL---HLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSK 141 (147)
Q Consensus 80 ~~v~~~~~~~~~~~~-~~~~~~~-----~~~~---~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~ 141 (147)
+....-..+++|+.+ .++++.. +.+. .....+| .+++|+|+|++|++|+.||.|++||+++.
T Consensus 214 ~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 214 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp ECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 222122344444444 4554431 1111 1111344 57999999999999999999999999764
No 53
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.81 E-value=8.3e-19 Score=144.62 Aligned_cols=143 Identities=15% Similarity=0.167 Sum_probs=105.0
Q ss_pred CeEeecCCeEEEEECCCCccc----eeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCC
Q 032092 1 MVVGTADRNLVVFNLQNPQTE----FKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDG 76 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~----~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~ 76 (147)
|++|+.||+|+|||+.+.... ...+ ..|...|++++|+|++++|++|+.||+|+| ||..+++...++.+|...
T Consensus 398 l~s~s~D~~i~~W~~~~~~~~~~~~~~~~-~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~v--wd~~~~~~~~~~~~h~~~ 474 (694)
T 3dm0_A 398 IVSASRDKSIILWKLTKDDKAYGVAQRRL-TGHSHFVEDVVLSSDGQFALSGSWDGELRL--WDLAAGVSTRRFVGHTKD 474 (694)
T ss_dssp EEEEETTSEEEEEECCCSTTCSCEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEE--EETTTTEEEEEEECCSSC
T ss_pred EEEEeCCCcEEEEEccCCCccccccccee-cCCCCcEEEEEECCCCCEEEEEeCCCcEEE--EECCCCcceeEEeCCCCC
Confidence 589999999999999875321 1222 246678999999999999999999999999 777778888899999875
Q ss_pred ce--EEeeccceeeeecCCCcceeeeeeeeeeee----eece----EEEEEecCC--CeEEEeCCCCcEEEeecCCceee
Q 032092 77 SE--TCSVISFTSILAGDAPKYSSFYKVKRLHLF----VKSH----VIVLFVQIH--HTFATAGSDGAFNFWDKDSKQRL 144 (147)
Q Consensus 77 ~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~fspdg--~~latg~~Dg~i~iWd~~~~~~~ 144 (147)
.. .+..+.-.++++|.|..++++......... ..+| ..++|+|++ ..|++|+.|++|++||+++++++
T Consensus 475 v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~ 554 (694)
T 3dm0_A 475 VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLR 554 (694)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEE
Confidence 43 333344334555665566665532221111 1344 468999987 68999999999999999988776
Q ss_pred ec
Q 032092 145 KV 146 (147)
Q Consensus 145 ~~ 146 (147)
.+
T Consensus 555 ~~ 556 (694)
T 3dm0_A 555 ST 556 (694)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 54
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.81 E-value=6.1e-19 Score=136.27 Aligned_cols=142 Identities=12% Similarity=0.044 Sum_probs=99.8
Q ss_pred eEeecCCeEEEEECCCCcc---ceeEecCCCCcceEEEEEcc-CCCEEEEEeeCCeEEEEeecCCCC-------cceeEE
Q 032092 2 VVGTADRNLVVFNLQNPQT---EFKRINSPLKYQMRCVAAFP-DQQGFWVGSIEGRVGVHHLDDSQQ-------SKNFTF 70 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~---~~~~~~~~~~~~i~~la~sp-dg~~l~~g~~dg~i~i~~~d~~~~-------~~~~~~ 70 (147)
++|+.||.|+|||+.+..+ ....+ ..|..+|.+++|+| ++++|++|+.||+|+| ||..++ +....+
T Consensus 51 ~~~~~~g~i~v~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~v--w~~~~~~~~~~~~~~~~~~ 127 (402)
T 2aq5_A 51 CEASGGGAFLVLPLGKTGRVDKNVPLV-CGHTAPVLDIAWCPHNDNVIASGSEDCTVMV--WEIPDGGLVLPLREPVITL 127 (402)
T ss_dssp BCCSSSCCEEEEETTCCEECCTTCCCB-CCCSSCEEEEEECTTCTTEEEEEETTSEEEE--EECCTTCCSSCBCSCSEEE
T ss_pred EEEcCCCEEEEEECccCCCCCCCCceE-ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEE--EEccCCCCccccCCceEEe
Confidence 3578899999999976432 11222 24667899999999 8999999999999999 555544 566788
Q ss_pred EeccCCce--EEeeccceeeee-cCCCcceeeeee-eeeeeee--ece----EEEEEecCCCeEEEeCCCCcEEEeecCC
Q 032092 71 KCHRDGSE--TCSVISFTSILA-GDAPKYSSFYKV-KRLHLFV--KSH----VIVLFVQIHHTFATAGSDGAFNFWDKDS 140 (147)
Q Consensus 71 ~~h~~~~~--~~~v~~~~~~~~-~~~~~~~~~~~~-~~~~~~~--~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~ 140 (147)
.+|..... .+....-.++++ +.|..+.++... .+....+ .+| ..++|+|++++|++|+.||.|++||+++
T Consensus 128 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 128 EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRK 207 (402)
T ss_dssp ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTT
T ss_pred cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCC
Confidence 88886543 333333224444 444445544411 1223334 344 5799999999999999999999999999
Q ss_pred ceeeec
Q 032092 141 KQRLKV 146 (147)
Q Consensus 141 ~~~~~~ 146 (147)
++.+.+
T Consensus 208 ~~~~~~ 213 (402)
T 2aq5_A 208 GTVVAE 213 (402)
T ss_dssp TEEEEE
T ss_pred Cceeee
Confidence 887754
No 55
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.81 E-value=2.9e-18 Score=128.27 Aligned_cols=143 Identities=18% Similarity=0.186 Sum_probs=91.1
Q ss_pred CeEeecCCeEEEEECCCCccc----eeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCC
Q 032092 1 MVVGTADRNLVVFNLQNPQTE----FKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDG 76 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~----~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~ 76 (147)
||||+.||+|+|||+.+.+.. ...+ ..|..+|.+++|+|+|++|++|+.||.|++ |+............+...
T Consensus 54 l~S~s~D~~i~vWd~~~~~~~~~~~~~~l-~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~--~~~~~~~~~~~~~~~~~~ 130 (340)
T 4aow_A 54 ILSASRDKTIIMWKLTRDETNYGIPQRAL-RGHSHFVSDVVISSDGQFALSGSWDGTLRL--WDLTTGTTTRRFVGHTKD 130 (340)
T ss_dssp EEEEETTSCEEEEEECCSSSCSEEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEE--EETTTTEEEEEEECCSSC
T ss_pred EEEEcCCCeEEEEECCCCCcccceeeEEE-eCCCCCEEEEEECCCCCEEEEEcccccceE--EeecccceeeeecCCCCc
Confidence 589999999999999876532 2223 346678999999999999999999999999 554433332222222111
Q ss_pred ce---------------------------------------------EEeecc-ceeeee-cCCCcceeeeee-eeeeee
Q 032092 77 SE---------------------------------------------TCSVIS-FTSILA-GDAPKYSSFYKV-KRLHLF 108 (147)
Q Consensus 77 ~~---------------------------------------------~~~v~~-~~~~~~-~~~~~~~~~~~~-~~~~~~ 108 (147)
.. .+.... ..++++ +.+..++++..- .+....
T Consensus 131 ~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~ 210 (340)
T 4aow_A 131 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 210 (340)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEE
T ss_pred eeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeE
Confidence 00 000000 011222 223333333211 122334
Q ss_pred eece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 109 VKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 109 ~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
+.+| ..++|+|++++|++|+.||.|++||+++.+.++.
T Consensus 211 ~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 252 (340)
T 4aow_A 211 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT 252 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeee
Confidence 4444 4689999999999999999999999999887764
No 56
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.80 E-value=9.2e-19 Score=131.58 Aligned_cols=138 Identities=12% Similarity=0.085 Sum_probs=94.5
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEcc---CCCEEEEEeeCCeEEEEeecCCCCcceeEEE-----e
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFP---DQQGFWVGSIEGRVGVHHLDDSQQSKNFTFK-----C 72 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~sp---dg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~-----~ 72 (147)
|++|+.||.|++||+++++. .... .+..+|.+++|+| +++.|++|+.||.|++ ||.++++....+. +
T Consensus 183 l~~~~~d~~i~i~d~~~~~~-~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i--~d~~~~~~~~~~~~~~~~~ 257 (357)
T 3i2n_A 183 VCAGYDNGDIKLFDLRNMAL-RWET--NIKNGVCSLEFDRKDISMNKLVATSLEGKFHV--FDMRTQHPTKGFASVSEKA 257 (357)
T ss_dssp EEEEETTSEEEEEETTTTEE-EEEE--ECSSCEEEEEESCSSSSCCEEEEEESTTEEEE--EEEEEEETTTEEEEEEEEC
T ss_pred EEEEccCCeEEEEECccCce-eeec--CCCCceEEEEcCCCCCCCCEEEEECCCCeEEE--EeCcCCCcccceeeeccCC
Confidence 57889999999999999864 2222 3456799999999 9999999999999999 5555555444443 6
Q ss_pred ccCCce--EEeeccceeeeecCCCc-ceeeeeee---------------------eeeeeeece----EEEEEecCCCeE
Q 032092 73 HRDGSE--TCSVISFTSILAGDAPK-YSSFYKVK---------------------RLHLFVKSH----VIVLFVQIHHTF 124 (147)
Q Consensus 73 h~~~~~--~~~v~~~~~~~~~~~~~-~~~~~~~~---------------------~~~~~~~~~----~~~~fspdg~~l 124 (147)
|..... .+....-.++++|+.++ +.++. +. +....+.+| ..++|+|+|++|
T Consensus 258 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 336 (357)
T 3i2n_A 258 HKSTVWQVRHLPQNRELFLTAGGAGGLHLWK-YEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGL 336 (357)
T ss_dssp CSSCEEEEEEETTEEEEEEEEETTSEEEEEE-EECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTE
T ss_pred CcCCEEEEEECCCCCcEEEEEeCCCcEEEee-cCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeE
Confidence 765432 23333322455555554 44433 22 233345555 579999999998
Q ss_pred E-EeCCCCcEEEeecCCceee
Q 032092 125 A-TAGSDGAFNFWDKDSKQRL 144 (147)
Q Consensus 125 a-tg~~Dg~i~iWd~~~~~~~ 144 (147)
+ ||+.||.|+|||+.+.+++
T Consensus 337 ~~s~~~d~~i~iw~~~~~~~i 357 (357)
T 3i2n_A 337 CVCSSFDQTVRVLIVTKLNKI 357 (357)
T ss_dssp EEEEETTSEEEEEEECC----
T ss_pred EEEecCCCcEEEEECCCcccC
Confidence 8 8999999999999887653
No 57
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.80 E-value=1.7e-18 Score=132.48 Aligned_cols=139 Identities=11% Similarity=0.095 Sum_probs=98.6
Q ss_pred CeEeecCCeEEEEECCCCccceeEecC--CCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCce
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINS--PLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~--~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~ 78 (147)
|++|+.||.|++||++... ...+.. .+...|.+++|+|++++|++|+.||.|++ ||. +++...++.+|.....
T Consensus 134 l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i--~d~-~~~~~~~~~~h~~~v~ 208 (383)
T 3ei3_B 134 LFVSSIRGATTLRDFSGSV--IQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLL--LGL-DGHEIFKEKLHKAKVT 208 (383)
T ss_dssp EEEEETTTEEEEEETTSCE--EEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEE--EET-TSCEEEEEECSSSCEE
T ss_pred EEEEeCCCEEEEEECCCCc--eEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEE--EEC-CCCEEEEeccCCCcEE
Confidence 5789999999999999642 233332 22356999999999999999999999999 666 4677888888886543
Q ss_pred E--EeeccceeeeecCCC-cceeeeeee-----eeeeeeece----EEEEEec-CCCeEEEeCCCCcEEEeecCCceeee
Q 032092 79 T--CSVISFTSILAGDAP-KYSSFYKVK-----RLHLFVKSH----VIVLFVQ-IHHTFATAGSDGAFNFWDKDSKQRLK 145 (147)
Q Consensus 79 ~--~~v~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~----~~~~fsp-dg~~latg~~Dg~i~iWd~~~~~~~~ 145 (147)
. +....-.++++++.+ .++++. +. .......+| ..++|+| ++++|++++.|+.|++||+++++.+.
T Consensus 209 ~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 287 (383)
T 3ei3_B 209 HAEFNPRCDWLMATSSVDATVKLWD-LRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPD 287 (383)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEE-GGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCS
T ss_pred EEEECCCCCCEEEEEeCCCEEEEEe-CCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccc
Confidence 3 333332145555545 444443 22 112222233 5799999 99999999999999999998876543
No 58
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.80 E-value=1.2e-19 Score=140.92 Aligned_cols=107 Identities=8% Similarity=-0.003 Sum_probs=84.5
Q ss_pred CeEeecCCeEEEEECCCCccceeE-e--cCCCCcceEEEEEcc--------CCCEEEEEeeCCeEEEEeecCCCCcceeE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKR-I--NSPLKYQMRCVAAFP--------DQQGFWVGSIEGRVGVHHLDDSQQSKNFT 69 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~-~--~~~~~~~i~~la~sp--------dg~~l~~g~~dg~i~i~~~d~~~~~~~~~ 69 (147)
||+|+.|++|+|||+++++..... + ..+|...|++|+|+| |+++||+|+.|++|+| ||++++.....
T Consensus 104 las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~--Wd~~~~~~~~~ 181 (393)
T 4gq1_A 104 LACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLII--WRLTDEGPILA 181 (393)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEE--EEEETTEEEEE
T ss_pred EEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEE--EECCCCceeee
Confidence 588999999999999987532111 1 235667899999998 8999999999999999 66666666666
Q ss_pred EEeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCC-CeEEEeCCCCcEEEeecCCceee
Q 032092 70 FKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIH-HTFATAGSDGAFNFWDKDSKQRL 144 (147)
Q Consensus 70 ~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg-~~latg~~Dg~i~iWd~~~~~~~ 144 (147)
+..|.. ++.++ +|+|++ ++|++|+.||+|++||+++++..
T Consensus 182 ~~~~~~-----~v~~v------------------------------~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~ 222 (393)
T 4gq1_A 182 GYPLSS-----PGISV------------------------------QFRPSNPNQLIVGERNGNIRIFDWTLNLSA 222 (393)
T ss_dssp EEECSS-----CEEEE------------------------------EEETTEEEEEEEEETTSEEEEEETTCCC--
T ss_pred ecCCCC-----CcEEE------------------------------EECCCCCceEEecCCCCEEEEEECCCCccc
Confidence 666664 35555 999987 68999999999999999887654
No 59
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.80 E-value=1.7e-18 Score=130.19 Aligned_cols=141 Identities=16% Similarity=0.133 Sum_probs=98.2
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCc--e
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGS--E 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~--~ 78 (147)
|++|+.||.|++||+++..++...+. .+..+|.+++|+|++++|++++.||.|++ ||.++++....+. +.... .
T Consensus 190 l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v--~d~~~~~~~~~~~-~~~~~~~~ 265 (369)
T 3zwl_B 190 IIAGHKDGKISKYDVSNNYEYVDSID-LHEKSISDMQFSPDLTYFITSSRDTNSFL--VDVSTLQVLKKYE-TDCPLNTA 265 (369)
T ss_dssp EEEEETTSEEEEEETTTTTEEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSEEEE--EETTTCCEEEEEE-CSSCEEEE
T ss_pred EEEEcCCCEEEEEECCCCcEeEEEEe-cCCCceeEEEECCCCCEEEEecCCceEEE--EECCCCceeeeec-CCCCceeE
Confidence 57899999999999998434444443 34567999999999999999999999999 7777777777776 32221 2
Q ss_pred EEeeccceeeeecCCCc-------------ceeeeeee--eeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecC
Q 032092 79 TCSVISFTSILAGDAPK-------------YSSFYKVK--RLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKD 139 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~-------------~~~~~~~~--~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~ 139 (147)
.+......+++++.+.. ...++++. +....+.+| ..++|+|++++|++|+.||.|+|||++
T Consensus 266 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 266 VITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFE 345 (369)
T ss_dssp EECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEEC
T ss_pred EecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECc
Confidence 33333433444444442 11122221 223344444 579999999999999999999999998
Q ss_pred Cceeee
Q 032092 140 SKQRLK 145 (147)
Q Consensus 140 ~~~~~~ 145 (147)
++...+
T Consensus 346 ~~~~~~ 351 (369)
T 3zwl_B 346 KSYFDF 351 (369)
T ss_dssp HHHHTC
T ss_pred cccchh
Confidence 765443
No 60
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.80 E-value=2.1e-18 Score=137.98 Aligned_cols=139 Identities=19% Similarity=0.200 Sum_probs=101.7
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCce--
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE-- 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~-- 78 (147)
|++|+.|+.|++||... + ....+. .+..+|.+++|+||+++|++++.|++|++ ||. +++...++.+|.....
T Consensus 400 l~~~~~d~~v~~~~~~~-~-~~~~~~-~~~~~v~~~~~s~d~~~l~~~~~d~~v~~--w~~-~~~~~~~~~~~~~~v~~~ 473 (577)
T 2ymu_A 400 IASASDDKTVKLWNRNG-Q-LLQTLT-GHSSSVWGVAFSPDDQTIASASDDKTVKL--WNR-NGQLLQTLTGHSSSVRGV 473 (577)
T ss_dssp EEEEETTSEEEEECTTC-C-EEEEEE-CCSSCEEEEEECTTSSEEEEEETTSEEEE--EET-TSCEEEEEECCSSCEEEE
T ss_pred EEEEeCCCEEEEEeCCC-C-EEEEec-CCCCCeEEEEECCCCCEEEEEcCCCEEEE--EEC-CCCEEEEEcCCCCCEEEE
Confidence 57899999999999653 3 334443 35568999999999999999999999999 554 4667778888876533
Q ss_pred EEeeccceeeeecCCCcceeeeeeeeeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 79 TCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.+..+...+++++.|..++++..-.+....+.+| ..++|+|||++||+|+.||.|+|||. +++++.+
T Consensus 474 ~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~ 544 (577)
T 2ymu_A 474 AFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQT 544 (577)
T ss_dssp EECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEE
T ss_pred EEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEE
Confidence 3434443344445555566555333445566666 57999999999999999999999996 5666554
No 61
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.80 E-value=3.3e-19 Score=138.64 Aligned_cols=145 Identities=12% Similarity=0.173 Sum_probs=95.0
Q ss_pred CeEeecCCeEEEEECCC---CccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCC-CCcceeEEEeccCC
Q 032092 1 MVVGTADRNLVVFNLQN---PQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDS-QQSKNFTFKCHRDG 76 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~---~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~-~~~~~~~~~~h~~~ 76 (147)
||+|+.||+|+|||+.+ +..........+..+|.+++|+|++++|++|+.||+|++|+++.. +++....+.+|...
T Consensus 79 l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~ 158 (437)
T 3gre_A 79 LITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIR 158 (437)
T ss_dssp EEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeE
Confidence 58999999999999977 321100111135568999999999999999999999999655422 34444444443211
Q ss_pred c------------eE----EeeccceeeeecCCC-cceeeee-eeeeeeeeec--e----EEEEEecCCCeEEEeCCCCc
Q 032092 77 S------------ET----CSVISFTSILAGDAP-KYSSFYK-VKRLHLFVKS--H----VIVLFVQIHHTFATAGSDGA 132 (147)
Q Consensus 77 ~------------~~----~~v~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~--~----~~~~fspdg~~latg~~Dg~ 132 (147)
. .+ ...+. ..+++|+.+ .+.++.. ..+....+.+ | ..++|+|++++|++|+.||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~ 237 (437)
T 3gre_A 159 KINLKNFGKNEYAVRMRAFVNEEK-SLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGI 237 (437)
T ss_dssp EEEGGGGSSCCCEEEEEEEECSSC-EEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSC
T ss_pred EEEccCcccccCceEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCe
Confidence 0 00 00112 234444444 4444432 1222334433 3 57999999999999999999
Q ss_pred EEEeecCCceeeec
Q 032092 133 FNFWDKDSKQRLKV 146 (147)
Q Consensus 133 i~iWd~~~~~~~~~ 146 (147)
|++||+++++++++
T Consensus 238 i~iwd~~~~~~~~~ 251 (437)
T 3gre_A 238 IDIWDIRFNVLIRS 251 (437)
T ss_dssp EEEEETTTTEEEEE
T ss_pred EEEEEcCCccEEEE
Confidence 99999999888764
No 62
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.80 E-value=1.4e-18 Score=133.92 Aligned_cols=138 Identities=9% Similarity=0.139 Sum_probs=97.3
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCC---c
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDG---S 77 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~---~ 77 (147)
|++|+.||+|++||+++++. ...+. .+..+|.+++|+|++++|++|+.||+|++ ||.++++....+..|... .
T Consensus 154 l~s~s~d~~i~iwd~~~~~~-~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~~v~i--wd~~~~~~~~~~~~~~~~~~~v 229 (420)
T 3vl1_A 154 LISSSQDMQLKIWSVKDGSN-PRTLI-GHRATVTDIAIIDRGRNVLSASLDGTIRL--WECGTGTTIHTFNRKENPHDGV 229 (420)
T ss_dssp EEEEETTSEEEEEETTTCCC-CEEEE-CCSSCEEEEEEETTTTEEEEEETTSCEEE--EETTTTEEEEEECBTTBTTCCE
T ss_pred EEEEeCCCeEEEEeCCCCcC-ceEEc-CCCCcEEEEEEcCCCCEEEEEcCCCcEEE--eECCCCceeEEeecCCCCCCCc
Confidence 58999999999999998864 34443 45678999999999999999999999999 787878888787754321 0
Q ss_pred e-----------------------EEeeccceeeeecCCC-cceeeee--eeeeeeeeec----eEEEEEecCCC-eEEE
Q 032092 78 E-----------------------TCSVISFTSILAGDAP-KYSSFYK--VKRLHLFVKS----HVIVLFVQIHH-TFAT 126 (147)
Q Consensus 78 ~-----------------------~~~v~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~----~~~~~fspdg~-~lat 126 (147)
. .+..+.. .+++|+.+ .+.++.. .+.......+ ...++|+|+++ +|++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 308 (420)
T 3vl1_A 230 NSIALFVGTDRQLHEISTSKKNNLEFGTYGK-YVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYA 308 (420)
T ss_dssp EEEEEEECCCSSCGGGCCCCCCTTCSSCTTE-EEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEE
T ss_pred cEEEEecCCcceeeecccCcccceEEcCCCC-EEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEE
Confidence 0 1111222 34444444 4444431 1112222223 35799999998 9999
Q ss_pred eCCCCcEEEeecCCcee
Q 032092 127 AGSDGAFNFWDKDSKQR 143 (147)
Q Consensus 127 g~~Dg~i~iWd~~~~~~ 143 (147)
|+.||.|++||+++++.
T Consensus 309 g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 309 GYENGMLAQWDLRSPEC 325 (420)
T ss_dssp EETTSEEEEEETTCTTS
T ss_pred EeCCCeEEEEEcCCCcC
Confidence 99999999999988643
No 63
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.79 E-value=5.9e-19 Score=150.35 Aligned_cols=144 Identities=8% Similarity=0.027 Sum_probs=99.9
Q ss_pred CeEeecCCeEEEEECCCCccce-eEec--------CCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCC-------
Q 032092 1 MVVGTADRNLVVFNLQNPQTEF-KRIN--------SPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQ------- 64 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~-~~~~--------~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~------- 64 (147)
||+|+.||+|++||+.+++... ..+. ..+...|.+|+|+|||++||+|+.||+|+||+++....
T Consensus 450 laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~ 529 (902)
T 2oaj_A 450 FITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRP 529 (902)
T ss_dssp EEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC-------
T ss_pred EEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccC
Confidence 5899999999999998874210 0110 13556799999999999999999999999977654310
Q ss_pred ------------------------------------cceeEEEeccCCc--eEEeeccceeeeecCCCcceeeeeeeee-
Q 032092 65 ------------------------------------SKNFTFKCHRDGS--ETCSVISFTSILAGDAPKYSSFYKVKRL- 105 (147)
Q Consensus 65 ------------------------------------~~~~~~~~h~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~- 105 (147)
+.+.++.+|.... .+++.+. ++++|++++....++++..
T Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG--~lAsgs~D~tv~lwd~~~~~ 607 (902)
T 2oaj_A 530 ESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG--FVGIAYAAGSLMLIDRRGPA 607 (902)
T ss_dssp --------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS--EEEEEETTSEEEEEETTTTE
T ss_pred CCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc--EEEEEeCCCcEEEEECCCCe
Confidence 1245667787653 3444444 6667777754333333321
Q ss_pred -e-----eeee-ce----EEEEEe-----cCC---CeEEEeCCCCcEEEeec---CCceeeec
Q 032092 106 -H-----LFVK-SH----VIVLFV-----QIH---HTFATAGSDGAFNFWDK---DSKQRLKV 146 (147)
Q Consensus 106 -~-----~~~~-~~----~~~~fs-----pdg---~~latg~~Dg~i~iWd~---~~~~~~~~ 146 (147)
. ..+. +| .+++|+ ||| ++|++|+.|++|++||+ .+++++.+
T Consensus 608 ~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~ 670 (902)
T 2oaj_A 608 IIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQ 670 (902)
T ss_dssp EEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEE
T ss_pred EEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEE
Confidence 1 1122 66 579999 886 89999999999999999 77776554
No 64
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.79 E-value=7.6e-19 Score=136.27 Aligned_cols=140 Identities=14% Similarity=0.160 Sum_probs=96.6
Q ss_pred CeEeecCCeEEEEECCCCccceeEe------cCCCCcceEEEEEccCC-CEEEEEeeCCeEEEEeecCCCCcc----eeE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRI------NSPLKYQMRCVAAFPDQ-QGFWVGSIEGRVGVHHLDDSQQSK----NFT 69 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~------~~~~~~~i~~la~spdg-~~l~~g~~dg~i~i~~~d~~~~~~----~~~ 69 (147)
|++| .||.|++||+++..+....+ ...+...|.+++|+|++ +.|++|+.||+|++ ||.++++. ...
T Consensus 192 l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~i--wd~~~~~~~~~~~~~ 268 (447)
T 3dw8_B 192 YLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRL--CDMRASALCDRHSKL 268 (447)
T ss_dssp EEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEE--EETTTCSSSCTTCEE
T ss_pred EEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEE--EECcCCccccceeeE
Confidence 4677 79999999999544333322 12355679999999998 99999999999999 77776665 677
Q ss_pred EEeccC------------Cc--eEEeeccceeeeecCCCcceeeeee--eeeeeeeeceE-------------------E
Q 032092 70 FKCHRD------------GS--ETCSVISFTSILAGDAPKYSSFYKV--KRLHLFVKSHV-------------------I 114 (147)
Q Consensus 70 ~~~h~~------------~~--~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-------------------~ 114 (147)
+.+|.. .. ..+..+... ++++++..+++|..- .+....+.+|. .
T Consensus 269 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~ 347 (447)
T 3dw8_B 269 FEEPEDPSNRSFFSEIISSISDVKFSHSGRY-MMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFE 347 (447)
T ss_dssp ECCC-----CCHHHHHTTCEEEEEECTTSSE-EEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCC
T ss_pred eccCCCccccccccccCceEEEEEECCCCCE-EEEeeCCeEEEEeCCCCccccceeeccccccccccccccccccccceE
Confidence 777754 22 233333333 344444444444321 23344555553 2
Q ss_pred EEEecCCCeEEEeCCCCcEEEeecCCceee
Q 032092 115 VLFVQIHHTFATAGSDGAFNFWDKDSKQRL 144 (147)
Q Consensus 115 ~~fspdg~~latg~~Dg~i~iWd~~~~~~~ 144 (147)
++|+|++++|++|+.||.|+|||+++++.+
T Consensus 348 ~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 348 CCWNGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp EEECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred EEECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 899999999999999999999999988765
No 65
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.79 E-value=2e-18 Score=132.12 Aligned_cols=136 Identities=15% Similarity=0.110 Sum_probs=95.4
Q ss_pred CeEeecCCeEEEEECCCCccceeEec-CCCCcceEEEEEcc-CCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccC---
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRIN-SPLKYQMRCVAAFP-DQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRD--- 75 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~-~~~~~~i~~la~sp-dg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~--- 75 (147)
|++|+.||.|+|||+.+++.. ..+. ..+...|.+++|+| ++++|++|+.||.|++ ||.+. .....+..|..
T Consensus 89 l~s~~~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i--wd~~~-~~~~~~~~~~~~~~ 164 (383)
T 3ei3_B 89 VAVGSKGGDIILWDYDVQNKT-SFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTL--RDFSG-SVIQVFAKTDSWDY 164 (383)
T ss_dssp EEEEEBTSCEEEEETTSTTCE-EEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEE--EETTS-CEEEEEECCCCSSC
T ss_pred EEEEcCCCeEEEEeCCCcccc-eeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEE--EECCC-CceEEEeccCCCCC
Confidence 589999999999999987543 3333 24667899999999 6899999999999999 66653 55556655542
Q ss_pred Cc--eEEeeccceeeeecCCCcceeeeeeeeeeeeeece----EEEEEecCCC-eEEEeCCCCcEEEeecCC
Q 032092 76 GS--ETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSH----VIVLFVQIHH-TFATAGSDGAFNFWDKDS 140 (147)
Q Consensus 76 ~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~fspdg~-~latg~~Dg~i~iWd~~~ 140 (147)
.. ..+..+...+++++.+..+.++..-.+....+.+| ..++|+|+++ +|++|+.|+.|++||+++
T Consensus 165 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 165 WYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred CeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 11 23333343334444444454444222233444454 5799999998 999999999999999987
No 66
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.79 E-value=1.6e-18 Score=147.79 Aligned_cols=139 Identities=14% Similarity=0.145 Sum_probs=98.5
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcce-----------eE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKN-----------FT 69 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~-----------~~ 69 (147)
|++|+.|++|+|||+++++. ...+. +...|++++|+|+++++++|+.||+|++ ||.++++.. ..
T Consensus 72 L~S~s~D~~v~lWd~~~~~~-~~~~~--~~~~V~~v~~sp~g~~l~sgs~dg~V~l--wd~~~~~~~~~~i~~~~~~~~~ 146 (902)
T 2oaj_A 72 LVVINAKDTVYVLSLYSQKV-LTTVF--VPGKITSIDTDASLDWMLIGLQNGSMIV--YDIDRDQLSSFKLDNLQKSSFF 146 (902)
T ss_dssp EEEEETTCEEEEEETTTCSE-EEEEE--CSSCEEEEECCTTCSEEEEEETTSCEEE--EETTTTEEEEEEECCHHHHHTC
T ss_pred EEEEECcCeEEEEECCCCcE-EEEEc--CCCCEEEEEECCCCCEEEEEcCCCcEEE--EECCCCccccceeccccccccc
Confidence 58999999999999999853 44443 3357999999999999999999999999 666655432 11
Q ss_pred EEeccCCc--eEEeeccceeeeecCCCcceeeeeee--eeeeeeec----------------------eEEEEEecCCCe
Q 032092 70 FKCHRDGS--ETCSVISFTSILAGDAPKYSSFYKVK--RLHLFVKS----------------------HVIVLFVQIHHT 123 (147)
Q Consensus 70 ~~~h~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----------------------~~~~~fspdg~~ 123 (147)
+.+|.... ..+.......+++|++++.. .|+++ +....+.+ ...++|+|||++
T Consensus 147 ~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~ 225 (902)
T 2oaj_A 147 PAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLH 225 (902)
T ss_dssp SSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSE
T ss_pred cccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCE
Confidence 23454432 23333223456666666555 55443 22222322 357999999999
Q ss_pred EEEeCCCCcEEEeecCCceeee
Q 032092 124 FATAGSDGAFNFWDKDSKQRLK 145 (147)
Q Consensus 124 latg~~Dg~i~iWd~~~~~~~~ 145 (147)
||||+.||+|+|||+++++++.
T Consensus 226 lasgs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 226 IITIHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp EEEEETTCCEEEEETTTCCEEE
T ss_pred EEEEECCCeEEEEECCCCcEEE
Confidence 9999999999999999887754
No 67
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.79 E-value=4e-18 Score=133.48 Aligned_cols=143 Identities=13% Similarity=0.195 Sum_probs=101.2
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEcc--CCCEEEEEeeCCeEEEEeecCCCCcc------------
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFP--DQQGFWVGSIEGRVGVHHLDDSQQSK------------ 66 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~sp--dg~~l~~g~~dg~i~i~~~d~~~~~~------------ 66 (147)
|++|+.||+|++||+++++. ...+. .+..+|.+++|+| +++++++|+.||+|++ ||.+++..
T Consensus 176 l~s~s~dg~i~vwd~~~~~~-~~~~~-~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~v--wd~~~~~~~~~~~~~~~~~~ 251 (464)
T 3v7d_B 176 LVSGSTDRTVRVWDIKKGCC-THVFE-GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHV--WKLPKESSVPDHGEEHDYPL 251 (464)
T ss_dssp EEEEETTSCEEEEETTTTEE-EEEEC-CCSSCEEEEEEEESSSCEEEEEEETTSCEEE--EECCCCCCC------CCSSE
T ss_pred EEEEeCCCCEEEEECCCCcE-EEEEC-CCCCccEEEEEecCCCCCEEEEEcCCCcEEE--eeCCCCcccccccccCCcce
Confidence 58999999999999999863 34443 4567899999984 7789999999999999 55544332
Q ss_pred -----------eeEEEeccCCceEEeeccceeeeecCCCcceeeeee-eeeeeeeece----EEEEEecCCCeEEEeCCC
Q 032092 67 -----------NFTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKV-KRLHLFVKSH----VIVLFVQIHHTFATAGSD 130 (147)
Q Consensus 67 -----------~~~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~fspdg~~latg~~D 130 (147)
...+.+|...........-.+++++.+..+.++... .+....+.+| ..++|+|++++|++|+.|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d 331 (464)
T 3v7d_B 252 VFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD 331 (464)
T ss_dssp EESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETT
T ss_pred EeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCC
Confidence 334555655433333444434455555555554421 2333445555 579999999999999999
Q ss_pred CcEEEeecCCceeeecC
Q 032092 131 GAFNFWDKDSKQRLKVF 147 (147)
Q Consensus 131 g~i~iWd~~~~~~~~~~ 147 (147)
|.|++||++++++++++
T Consensus 332 g~i~vwd~~~~~~~~~~ 348 (464)
T 3v7d_B 332 TTIRIWDLENGELMYTL 348 (464)
T ss_dssp SCEEEEETTTTEEEEEE
T ss_pred CcEEEEECCCCcEEEEE
Confidence 99999999999887653
No 68
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.79 E-value=1.9e-18 Score=129.59 Aligned_cols=117 Identities=37% Similarity=0.609 Sum_probs=92.2
Q ss_pred CeEeecCCeEEEEECCC-CccceeEecCCCCcceEEEEEcc-CCCEEEEEeeCCeEEEEeecCC--C--CcceeEEEecc
Q 032092 1 MVVGTADRNLVVFNLQN-PQTEFKRINSPLKYQMRCVAAFP-DQQGFWVGSIEGRVGVHHLDDS--Q--QSKNFTFKCHR 74 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~-~~~~~~~~~~~~~~~i~~la~sp-dg~~l~~g~~dg~i~i~~~d~~--~--~~~~~~~~~h~ 74 (147)
|++|+.||.|++||+++ ++.+.......+..++++++|+| ++++|++|+.||.|++|+++.. + .+....+.+|.
T Consensus 163 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 242 (342)
T 1yfq_A 163 LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHR 242 (342)
T ss_dssp EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCC
T ss_pred EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccc
Confidence 57899999999999998 65433444445667899999999 9999999999999999777654 1 26677888875
Q ss_pred CCc----eEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeecC
Q 032092 75 DGS----ETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKVF 147 (147)
Q Consensus 75 ~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~~ 147 (147)
... +..++.++ +|+|++++|++|+.||.|++||++++++++++
T Consensus 243 ~~~~~~~~~~~i~~~------------------------------~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 289 (342)
T 1yfq_A 243 LNLKDTNLAYPVNSI------------------------------EFSPRHKFLYTAGSDGIISCWNLQTRKKIKNF 289 (342)
T ss_dssp CCTTCCSSCCCEEEE------------------------------EECTTTCCEEEEETTSCEEEEETTTTEEEEEC
T ss_pred ccccccccceeEEEE------------------------------EEcCCCCEEEEecCCceEEEEcCccHhHhhhh
Confidence 410 11134444 99999999999999999999999999888764
No 69
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.79 E-value=3.1e-18 Score=148.11 Aligned_cols=140 Identities=17% Similarity=0.227 Sum_probs=105.8
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceE-
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSET- 79 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~- 79 (147)
||+|+.||+|++||+.+++. ...+. .|..+|.+++|+|+++++++|+.||+|++ ||..+++.+.++.+|.....+
T Consensus 630 l~s~~~d~~i~vw~~~~~~~-~~~~~-~h~~~v~~~~~s~~~~~l~s~~~d~~v~v--wd~~~~~~~~~~~~~~~~v~~~ 705 (1249)
T 3sfz_A 630 IASCGADKTLQVFKAETGEK-LLDIK-AHEDEVLCCAFSSDDSYIATCSADKKVKI--WDSATGKLVHTYDEHSEQVNCC 705 (1249)
T ss_dssp EEEEETTSCEEEEETTTCCE-EEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEE--EETTTCCEEEEEECCSSCEEEE
T ss_pred EEEEeCCCeEEEEECCCCCE-EEEec-cCCCCEEEEEEecCCCEEEEEeCCCeEEE--EECCCCceEEEEcCCCCcEEEE
Confidence 58899999999999999864 44444 46678999999999999999999999999 777788888999988765432
Q ss_pred -Eeec-cceeeeecCCCc-ceeeeeee--eeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeee
Q 032092 80 -CSVI-SFTSILAGDAPK-YSSFYKVK--RLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLK 145 (147)
Q Consensus 80 -~~v~-~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~ 145 (147)
+... ...++++|+.++ +.+|. +. +....+.+| ..++|+|++++|++|+.||.|++||+.+++...
T Consensus 706 ~~~~~~~~~~l~sg~~d~~v~vwd-~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~ 779 (1249)
T 3sfz_A 706 HFTNKSNHLLLATGSNDFFLKLWD-LNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERK 779 (1249)
T ss_dssp EECSSSSCCEEEEEETTSCEEEEE-TTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEE
T ss_pred EEecCCCceEEEEEeCCCeEEEEE-CCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccc
Confidence 2221 122344555554 44443 32 233445555 578999999999999999999999998876654
No 70
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.79 E-value=4.2e-19 Score=135.31 Aligned_cols=136 Identities=11% Similarity=0.062 Sum_probs=91.3
Q ss_pred CeEeecCCeEEEEECCCCc-cceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCc---ceeEEEeccCC
Q 032092 1 MVVGTADRNLVVFNLQNPQ-TEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQS---KNFTFKCHRDG 76 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~-~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~---~~~~~~~h~~~ 76 (147)
||+|+.||.|+|||+.+++ ++...+. .|..+|.+++|+|++++|++|+.||+|++ ||..+++ ....+.+|...
T Consensus 26 l~~~~~d~~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~d~~v~v--wd~~~~~~~~~~~~~~~~~~~ 102 (377)
T 3dwl_C 26 FVTTTATNQVELYEQDGNGWKHARTFS-DHDKIVTCVDWAPKSNRIVTCSQDRNAYV--YEKRPDGTWKQTLVLLRLNRA 102 (377)
T ss_dssp EECCCSSSCBCEEEEETTEEEECCCBC-CCSSCEEEEEECTTTCCEEEEETTSSEEE--C------CCCCEEECCCCSSC
T ss_pred EEEecCCCEEEEEEccCCceEEEEEEe-cCCceEEEEEEeCCCCEEEEEeCCCeEEE--EEcCCCCceeeeeEecccCCc
Confidence 5788899999999999873 2233333 45678999999999999999999999999 6666554 45556667654
Q ss_pred ceE--EeeccceeeeecCCCcceeeeeeee----eeeeeec-e----EEEEEecCCCeEEEeCCCCcEEEeecC
Q 032092 77 SET--CSVISFTSILAGDAPKYSSFYKVKR----LHLFVKS-H----VIVLFVQIHHTFATAGSDGAFNFWDKD 139 (147)
Q Consensus 77 ~~~--~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~----~~~~fspdg~~latg~~Dg~i~iWd~~ 139 (147)
... +..+.-.+++++.+..+.++..... ....+.+ | ..++|+|++++|++|+.|+.|++||++
T Consensus 103 v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 103 ATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp EEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEEC
T ss_pred eEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEE
Confidence 332 2223333344444444544432111 2334444 4 579999999999999999999999985
No 71
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.79 E-value=5.8e-18 Score=127.95 Aligned_cols=140 Identities=14% Similarity=0.180 Sum_probs=95.8
Q ss_pred CeEeecCCeEEEEECCCCcc-ceeEecCCCCcceEEEEEccC--CCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCc
Q 032092 1 MVVGTADRNLVVFNLQNPQT-EFKRINSPLKYQMRCVAAFPD--QQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGS 77 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~-~~~~~~~~~~~~i~~la~spd--g~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~ 77 (147)
|++|+.||.|++||+++++. ..... ..+..+|.+++|+|+ +++|++|+.||.|++|+++.........+.+|....
T Consensus 72 l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v 150 (379)
T 3jrp_A 72 LASCSYDGKVLIWKEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV 150 (379)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCE
T ss_pred EEEeccCCEEEEEEcCCCceeEeeee-cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCce
Confidence 58999999999999998752 22222 245568999999999 999999999999999444333223445566676543
Q ss_pred e--EEee-------------ccceeeeecCCCcceeeeee-----eeeeeeeece----EEEEEecC---CCeEEEeCCC
Q 032092 78 E--TCSV-------------ISFTSILAGDAPKYSSFYKV-----KRLHLFVKSH----VIVLFVQI---HHTFATAGSD 130 (147)
Q Consensus 78 ~--~~~v-------------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~----~~~~fspd---g~~latg~~D 130 (147)
. .+.. +...+++++.+..++++..- ......+.+| ..++|+|+ +++|++|+.|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d 230 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD 230 (379)
T ss_dssp EEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred EEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCC
Confidence 2 2322 23333444444445444321 1223345555 47999999 8999999999
Q ss_pred CcEEEeecCCc
Q 032092 131 GAFNFWDKDSK 141 (147)
Q Consensus 131 g~i~iWd~~~~ 141 (147)
|.|+|||++++
T Consensus 231 g~i~iwd~~~~ 241 (379)
T 3jrp_A 231 RTCIIWTQDNE 241 (379)
T ss_dssp SCEEEEEESST
T ss_pred CEEEEEeCCCC
Confidence 99999999875
No 72
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.79 E-value=2.3e-18 Score=139.32 Aligned_cols=141 Identities=11% Similarity=0.047 Sum_probs=97.0
Q ss_pred CeEeecCCeEEEEECCCCccc----------eeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCC-cceeE
Q 032092 1 MVVGTADRNLVVFNLQNPQTE----------FKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQ-SKNFT 69 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~----------~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~-~~~~~ 69 (147)
||+|+.||+|+|||+.+++.. ...+ ..+..+|.+++|+|+ +.|++|+.||+|++ ||++++ .+...
T Consensus 228 LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l-~~h~~~v~sv~~s~~-~~lasgs~DgtV~l--WD~~~~~~~~~~ 303 (524)
T 2j04_B 228 LSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTL-SLADSLITTFDFLSP-TTVVCGFKNGFVAE--FDLTDPEVPSFY 303 (524)
T ss_dssp EEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEE-CCTTTCEEEEEESSS-SEEEEEETTSEEEE--EETTBCSSCSEE
T ss_pred EEEEecCCeEEEEEcCCCccccccceeecCceEEE-EcCCCCEEEEEecCC-CeEEEEeCCCEEEE--EECCCCCCceEE
Confidence 588999999999999876421 1122 235567999999986 48999999999999 666654 34456
Q ss_pred EEeccCCceEE----eeccceeeeecCCC-cceeeeeee--eeeeeeece------EEEEEecCCCeEEEeCCCCcEEEe
Q 032092 70 FKCHRDGSETC----SVISFTSILAGDAP-KYSSFYKVK--RLHLFVKSH------VIVLFVQIHHTFATAGSDGAFNFW 136 (147)
Q Consensus 70 ~~~h~~~~~~~----~v~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~------~~~~fspdg~~latg~~Dg~i~iW 136 (147)
+.+|....... +.+.-.++++++.| .++++. +. +....+.+| .+++|+|+++.|++++.|++|++|
T Consensus 304 ~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD-~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lw 382 (524)
T 2j04_B 304 DQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFN-PKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAV 382 (524)
T ss_dssp EECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEEC-GGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEE
T ss_pred eecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEE-CCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEE
Confidence 88888654322 22221345555555 454444 32 112223333 368999999999999999999999
Q ss_pred ecCCceeeec
Q 032092 137 DKDSKQRLKV 146 (147)
Q Consensus 137 d~~~~~~~~~ 146 (147)
|+++++++++
T Consensus 383 d~~~~~~~~~ 392 (524)
T 2j04_B 383 PSRAAFAVHP 392 (524)
T ss_dssp ETTCTTCCEE
T ss_pred ECccccccee
Confidence 9998876543
No 73
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.79 E-value=5e-18 Score=127.65 Aligned_cols=141 Identities=19% Similarity=0.293 Sum_probs=96.2
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEE--ccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCc-
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAA--FPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGS- 77 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~--spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~- 77 (147)
|++|+.||.|++||+++++. .... .+..+|.+++| +|++++|++|+.||.|++ ||.++++.+..+..|....
T Consensus 101 l~s~~~dg~v~iwd~~~~~~-~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~v--wd~~~~~~~~~~~~~~~~~~ 175 (368)
T 3mmy_A 101 VFTASCDKTAKMWDLSSNQA-IQIA--QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKF--WDTRSSNPMMVLQLPERCYC 175 (368)
T ss_dssp EEEEETTSEEEEEETTTTEE-EEEE--ECSSCEEEEEEEECSSCEEEEEEETTSEEEE--ECSSCSSCSEEEECSSCEEE
T ss_pred EEEEcCCCcEEEEEcCCCCc-eeec--cccCceEEEEEEeCCCCCEEEEccCCCcEEE--EECCCCcEEEEEecCCCceE
Confidence 57899999999999999853 3322 35568999999 899999999999999999 7777777766666543100
Q ss_pred ----------------------------------------e--EEeec---c-ceeeeecCCCcceeeeeee-----eee
Q 032092 78 ----------------------------------------E--TCSVI---S-FTSILAGDAPKYSSFYKVK-----RLH 106 (147)
Q Consensus 78 ----------------------------------------~--~~~v~---~-~~~~~~~~~~~~~~~~~~~-----~~~ 106 (147)
. ..... . ..+++++.+..+.++. +. ...
T Consensus 176 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~-~~~~~~~~~~ 254 (368)
T 3mmy_A 176 ADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHY-INPPNPAKDN 254 (368)
T ss_dssp EEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEE-SSCSCHHHHS
T ss_pred EEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEe-cCCCCccccc
Confidence 0 00000 0 0023333333333332 11 112
Q ss_pred eeee----------------ceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeecC
Q 032092 107 LFVK----------------SHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKVF 147 (147)
Q Consensus 107 ~~~~----------------~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~~ 147 (147)
..+. ....++|+|++++|++|+.||.|++||+++++++.++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 311 (368)
T 3mmy_A 255 FTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTS 311 (368)
T ss_dssp EEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC
T ss_pred eeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEe
Confidence 2222 2456899999999999999999999999999887754
No 74
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.78 E-value=3.4e-18 Score=130.39 Aligned_cols=143 Identities=9% Similarity=0.092 Sum_probs=91.8
Q ss_pred CeEeecCCeEEEEECCCCccceeEec--------------CCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcc
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRIN--------------SPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSK 66 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~--------------~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~ 66 (147)
|++|+.||.|++||+++++.+...+. ..+..+|.+++|+|++++|++|+.||.|++ ||.++++.
T Consensus 202 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v--wd~~~~~~ 279 (408)
T 4a11_B 202 LATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRL--WNSSNGEN 279 (408)
T ss_dssp EEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEE--EETTTCCB
T ss_pred EEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEE--EECCCCcc
Confidence 47899999999999998753333221 234567999999999999999999999999 66666555
Q ss_pred eeEEEeccCC----c--eEEeec-cceeeeecCCCcceeeee-eeeeeeeeece----EEEEEecCCCeEEEeCCCCcEE
Q 032092 67 NFTFKCHRDG----S--ETCSVI-SFTSILAGDAPKYSSFYK-VKRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFN 134 (147)
Q Consensus 67 ~~~~~~h~~~----~--~~~~v~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~ 134 (147)
...+..+... . ...... ...++.++.+..+.++.. ..+....+.+| ..++|+|++++|++|+.||.|+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~ 359 (408)
T 4a11_B 280 TLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNIL 359 (408)
T ss_dssp CCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred ceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEE
Confidence 4433322211 0 011111 112233344444444431 11233445555 5799999999999999999999
Q ss_pred EeecCCceeee
Q 032092 135 FWDKDSKQRLK 145 (147)
Q Consensus 135 iWd~~~~~~~~ 145 (147)
+||+++++.+.
T Consensus 360 iw~~~~~~~~~ 370 (408)
T 4a11_B 360 AWVPSLYEPVP 370 (408)
T ss_dssp EEEECC-----
T ss_pred EEeCCCCCccC
Confidence 99999887654
No 75
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.78 E-value=2.6e-18 Score=131.36 Aligned_cols=143 Identities=16% Similarity=0.187 Sum_probs=101.7
Q ss_pred CeEeecCCeEEEEECCC------Ccccee-----Eec------CCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCC
Q 032092 1 MVVGTADRNLVVFNLQN------PQTEFK-----RIN------SPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQ 63 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~------~~~~~~-----~~~------~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~ 63 (147)
|++|+.||.|++||+++ ++.. . .+. ..+...|.+++|+|++ .|++|+.||.|++ ||.++
T Consensus 141 l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i--~d~~~ 216 (397)
T 1sq9_A 141 LVATDVKGTTYIWKFHPFADESNSLTL-NWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQI--SELST 216 (397)
T ss_dssp EEEEETTSCEEEEEEESSSSHHHHTTT-CCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEE--EETTT
T ss_pred EEEEeCCCcEEEEeCCcccccccccee-eccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEE--EECCC
Confidence 57899999999999998 5432 2 332 2345679999999999 9999999999999 78777
Q ss_pred CcceeEEEe---c---cCCce--EEeeccceeeeecCC---Ccceeeee-eeeeeeeeec-------------e----EE
Q 032092 64 QSKNFTFKC---H---RDGSE--TCSVISFTSILAGDA---PKYSSFYK-VKRLHLFVKS-------------H----VI 114 (147)
Q Consensus 64 ~~~~~~~~~---h---~~~~~--~~~v~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~-------------~----~~ 114 (147)
++.+..+.. | ..... .+..+...+++++.+ ..+.++.. ..+....+.+ | ..
T Consensus 217 ~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 296 (397)
T 1sq9_A 217 LRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMS 296 (397)
T ss_dssp TEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEE
T ss_pred CceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEE
Confidence 888888888 7 54432 333334333444444 34444331 1122333444 4 57
Q ss_pred EEEecCCCeEEEeCCCCcEEEeecCCceeeecC
Q 032092 115 VLFVQIHHTFATAGSDGAFNFWDKDSKQRLKVF 147 (147)
Q Consensus 115 ~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~~ 147 (147)
++|+|++++|++|+.||.|++||+++++++.++
T Consensus 297 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 329 (397)
T 1sq9_A 297 LSFNDSGETLCSAGWDGKLRFWDVKTKERITTL 329 (397)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCCceeEEE
Confidence 999999999999999999999999998887653
No 76
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.78 E-value=1.1e-18 Score=131.30 Aligned_cols=107 Identities=16% Similarity=0.189 Sum_probs=84.1
Q ss_pred CeEeecCCeEEEEECCCCccce-eEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEF-KRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSET 79 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~-~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~ 79 (147)
|++|+.||.|+|||+.+..... ..+ ..+..+|.+++|+|++++|++|+.||.|++ ||..+++... +..|..
T Consensus 57 l~~~~~dg~i~iw~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~dg~v~i--wd~~~~~~~~-~~~~~~---- 128 (368)
T 3mmy_A 57 LIAGSWANDVRCWEVQDSGQTIPKAQ-QMHTGPVLDVCWSDDGSKVFTASCDKTAKM--WDLSSNQAIQ-IAQHDA---- 128 (368)
T ss_dssp EEEEETTSEEEEEEECTTSCEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSEEEE--EETTTTEEEE-EEECSS----
T ss_pred EEEECCCCcEEEEEcCCCCceeEEEe-ccccCCEEEEEECcCCCEEEEEcCCCcEEE--EEcCCCCcee-eccccC----
Confidence 5899999999999999833333 333 245678999999999999999999999999 6666555443 455654
Q ss_pred EeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEE--ecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 80 CSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLF--VQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 80 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f--spdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
++.++ +| +|++++|++|+.||.|++||+++++.+.+
T Consensus 129 -~v~~~------------------------------~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 166 (368)
T 3mmy_A 129 -PVKTI------------------------------HWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMV 166 (368)
T ss_dssp -CEEEE------------------------------EEEECSSCEEEEEEETTSEEEEECSSCSSCSEE
T ss_pred -ceEEE------------------------------EEEeCCCCCEEEEccCCCcEEEEECCCCcEEEE
Confidence 35555 88 88999999999999999999988876553
No 77
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.78 E-value=7.7e-18 Score=128.76 Aligned_cols=139 Identities=12% Similarity=0.092 Sum_probs=99.2
Q ss_pred CeEeecCCeEEEEECCCCccceeEecC--CC---CcceEEEEEccCCCEEEEEeeC---CeEEEEeecCCCCcceeEEEe
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINS--PL---KYQMRCVAAFPDQQGFWVGSIE---GRVGVHHLDDSQQSKNFTFKC 72 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~--~~---~~~i~~la~spdg~~l~~g~~d---g~i~i~~~d~~~~~~~~~~~~ 72 (147)
|++|+.||.|++||+++++ +...+.. .+ ..+|.+++|+|++++|++|+.| |.|++ ||.++++.+..+.+
T Consensus 200 l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i--~d~~~~~~~~~~~~ 276 (397)
T 1sq9_A 200 IATGFNNGTVQISELSTLR-PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITL--YETEFGERIGSLSV 276 (397)
T ss_dssp EEEECTTSEEEEEETTTTE-EEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEE--EETTTCCEEEEECB
T ss_pred EEEEeCCCcEEEEECCCCc-eeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEE--EECCCCcccceecc
Confidence 5789999999999999875 3444442 04 5679999999999999999999 99999 78777888888887
Q ss_pred -------------ccCCce--EEeeccceeeeecCCCcceeeeee-eeeeeeee------c-------------------
Q 032092 73 -------------HRDGSE--TCSVISFTSILAGDAPKYSSFYKV-KRLHLFVK------S------------------- 111 (147)
Q Consensus 73 -------------h~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~------------------- 111 (147)
|..... .+..+.-.+++++.+..+.+|... .+....+. +
T Consensus 277 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 356 (397)
T 1sq9_A 277 PTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG 356 (397)
T ss_dssp C--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred CcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCc
Confidence 766432 333334334444544445544311 12222333 3
Q ss_pred eEEEEEecCC----------CeEEEeCCCCcEEEeecCCce
Q 032092 112 HVIVLFVQIH----------HTFATAGSDGAFNFWDKDSKQ 142 (147)
Q Consensus 112 ~~~~~fspdg----------~~latg~~Dg~i~iWd~~~~~ 142 (147)
...++|+|+| ++|++|+.||.|++||+++++
T Consensus 357 v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 357 VFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp EEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred eeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 3579999998 799999999999999998764
No 78
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.78 E-value=1.3e-18 Score=129.17 Aligned_cols=109 Identities=17% Similarity=0.218 Sum_probs=82.8
Q ss_pred CeEeecCCeEEEEECCCCccc---eeEecCCCCcceEEEEEcc--CCCEEEEEeeCCeEEEEeecCCCC-------ccee
Q 032092 1 MVVGTADRNLVVFNLQNPQTE---FKRINSPLKYQMRCVAAFP--DQQGFWVGSIEGRVGVHHLDDSQQ-------SKNF 68 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~---~~~~~~~~~~~i~~la~sp--dg~~l~~g~~dg~i~i~~~d~~~~-------~~~~ 68 (147)
|++|+.||.|++||+.++... ...+. .+..+|.+++|+| |+++|++|+.||+|++|+++.... +...
T Consensus 26 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~ 104 (351)
T 3f3f_A 26 VATCSSDQHIKVFKLDKDTSNWELSDSWR-AHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLC 104 (351)
T ss_dssp EEEEETTSEEEEEEECSSSCCEEEEEEEE-CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEE
T ss_pred EEEeeCCCeEEEEECCCCCCcceecceec-cCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceee
Confidence 589999999999999976432 22222 4567899999999 699999999999999955543211 2344
Q ss_pred EEEeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecC--CCeEEEeCCCCcEEEeecCCceeee
Q 032092 69 TFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQI--HHTFATAGSDGAFNFWDKDSKQRLK 145 (147)
Q Consensus 69 ~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspd--g~~latg~~Dg~i~iWd~~~~~~~~ 145 (147)
.+.+|.. .+.++ +|+|+ +++|++|+.||.|++||+++++.+.
T Consensus 105 ~~~~~~~-----~v~~~------------------------------~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~ 148 (351)
T 3f3f_A 105 TLNDSKG-----SLYSV------------------------------KFAPAHLGLKLACLGNDGILRLYDALEPSDLR 148 (351)
T ss_dssp EECCCSS-----CEEEE------------------------------EECCGGGCSEEEEEETTCEEEEEECSSTTCTT
T ss_pred eecccCC-----ceeEE------------------------------EEcCCCCCcEEEEecCCCcEEEecCCChHHhc
Confidence 5555543 34454 99999 9999999999999999998876554
No 79
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.78 E-value=1.5e-17 Score=123.83 Aligned_cols=140 Identities=14% Similarity=0.180 Sum_probs=99.2
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCc--e
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGS--E 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~--~ 78 (147)
|++|+.||.|++||+++++. ...+. .+..++.+++|+|+++.|++++.||.|++ ||.++++....+. |.... .
T Consensus 156 l~~~~~dg~v~~~d~~~~~~-~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~~--~d~~~~~~~~~~~-~~~~v~~~ 230 (337)
T 1gxr_A 156 CFSCCSDGNIAVWDLHNQTL-VRQFQ-GHTDGASCIDISNDGTKLWTGGLDNTVRS--WDLREGRQLQQHD-FTSQIFSL 230 (337)
T ss_dssp EEEEETTSCEEEEETTTTEE-EEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEE--EETTTTEEEEEEE-CSSCEEEE
T ss_pred EEEEeCCCcEEEEeCCCCce-eeeee-cccCceEEEEECCCCCEEEEEecCCcEEE--EECCCCceEeeec-CCCceEEE
Confidence 57899999999999998753 44443 35567999999999999999999999999 7777776666554 33322 2
Q ss_pred EEeeccceeeeecCCCcceeeeeeeeeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeee
Q 032092 79 TCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLK 145 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~ 145 (147)
.+..+...+++++.+..+..+.........+.+| ..++|+|++++|++++.||.|++||+++++.+.
T Consensus 231 ~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 231 GYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF 301 (337)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEE
Confidence 2333333334444444455444221222233333 579999999999999999999999999887664
No 80
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.78 E-value=2.7e-17 Score=122.46 Aligned_cols=142 Identities=15% Similarity=0.143 Sum_probs=99.3
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCce--
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE-- 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~-- 78 (147)
|++|+.||.|++||+++++.........+..++.+++|+|+++++++++.||.|++ ||.++++....+.+|.....
T Consensus 112 l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~--~d~~~~~~~~~~~~~~~~i~~~ 189 (337)
T 1gxr_A 112 LIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV--WDLHNQTLVRQFQGHTDGASCI 189 (337)
T ss_dssp EEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEE--EETTTTEEEEEECCCSSCEEEE
T ss_pred EEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEE--EeCCCCceeeeeecccCceEEE
Confidence 57889999999999998753211112234567999999999999999999999999 77777888888888876433
Q ss_pred EEeeccceeeeecCCCcceeeeee-eeeeeee---eceEEEEEecCCCeEEEeCCCCcEEEeecCCceee
Q 032092 79 TCSVISFTSILAGDAPKYSSFYKV-KRLHLFV---KSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRL 144 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~ 144 (147)
.+..+.-.+++++.+..+..+... .+....+ .....++|+|++++|++++.|+.|++||+++++..
T Consensus 190 ~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~ 259 (337)
T 1gxr_A 190 DISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY 259 (337)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE
T ss_pred EECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE
Confidence 233333333444544444444311 1111111 23357899999999999999999999999887653
No 81
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.2e-17 Score=123.43 Aligned_cols=137 Identities=13% Similarity=0.131 Sum_probs=97.8
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceE-
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSET- 79 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~- 79 (147)
|++|+.||.|++||..+. ...+...+..++.+++|+|++. +++|+.||.|++ ||.++++.+..+.+|......
T Consensus 158 l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i--~d~~~~~~~~~~~~~~~~i~~~ 231 (313)
T 3odt_A 158 FLTASADKTIKLWQNDKV---IKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKL--VDMHTGDVLRTYEGHESFVYCI 231 (313)
T ss_dssp EEEEETTSCEEEEETTEE---EEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEE--EETTTCCEEEEEECCSSCEEEE
T ss_pred EEEEECCCCEEEEecCce---EEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEE--EECCchhhhhhhhcCCceEEEE
Confidence 578999999999994432 3344444566899999999998 999999999999 788888888899888765332
Q ss_pred -EeeccceeeeecCCCcceeeee-eeeeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeee
Q 032092 80 -CSVISFTSILAGDAPKYSSFYK-VKRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLK 145 (147)
Q Consensus 80 -~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~ 145 (147)
+..+. .+++++.+..+.++.. ..+....+..| ..++|+|+++ +++|+.||.|++||+++++.+.
T Consensus 232 ~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 232 KLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp EECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC
T ss_pred EEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceee
Confidence 33333 2344454444544441 11223334333 5799999998 6678899999999999877654
No 82
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.77 E-value=4.3e-18 Score=128.77 Aligned_cols=146 Identities=19% Similarity=0.119 Sum_probs=98.0
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCc-ceeEE-EeccCCce
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQS-KNFTF-KCHRDGSE 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~-~~~~~-~~h~~~~~ 78 (147)
|++|+.||.|++||+++++.........+..+|.+++|+|++++|++|+.||.|++|+++..... ....+ .+|.....
T Consensus 67 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~ 146 (372)
T 1k8k_C 67 IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVL 146 (372)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEE
T ss_pred EEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCee
Confidence 57899999999999988752111111245567999999999999999999999999666553211 12222 23443322
Q ss_pred --EEeeccceeeeecCCCcceeeee-------------------eeeeeeeeece----EEEEEecCCCeEEEeCCCCcE
Q 032092 79 --TCSVISFTSILAGDAPKYSSFYK-------------------VKRLHLFVKSH----VIVLFVQIHHTFATAGSDGAF 133 (147)
Q Consensus 79 --~~~v~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i 133 (147)
.+..+...+++++.+..+.++.. ..+....+.+| ..++|+|++++|++|+.||.|
T Consensus 147 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 226 (372)
T 1k8k_C 147 SLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTV 226 (372)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEE
T ss_pred EEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEE
Confidence 23333333444455555555441 11233344444 579999999999999999999
Q ss_pred EEeecCCceeeec
Q 032092 134 NFWDKDSKQRLKV 146 (147)
Q Consensus 134 ~iWd~~~~~~~~~ 146 (147)
++||+++++++.+
T Consensus 227 ~i~d~~~~~~~~~ 239 (372)
T 1k8k_C 227 CLADADKKMAVAT 239 (372)
T ss_dssp EEEEGGGTTEEEE
T ss_pred EEEECCCCceeEE
Confidence 9999998887764
No 83
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.77 E-value=1.2e-18 Score=131.08 Aligned_cols=105 Identities=17% Similarity=0.221 Sum_probs=86.8
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEcc-CCCEEEEEeeCCeEEEEeecCCCCcceeEE---EeccCC
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFP-DQQGFWVGSIEGRVGVHHLDDSQQSKNFTF---KCHRDG 76 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~sp-dg~~l~~g~~dg~i~i~~~d~~~~~~~~~~---~~h~~~ 76 (147)
|++|+.||.|++||+.+++. ...+. .+..+|.+++|+| ++++|++|+.||+|++ ||.++++....+ .+|..
T Consensus 88 l~~~~~dg~i~v~d~~~~~~-~~~~~-~~~~~i~~~~~~~~~~~~l~s~~~dg~i~i--wd~~~~~~~~~~~~~~~~~~- 162 (366)
T 3k26_A 88 LAVAGSRGIIRIINPITMQC-IKHYV-GHGNAINELKFHPRDPNLLLSVSKDHALRL--WNIQTDTLVAIFGGVEGHRD- 162 (366)
T ss_dssp EEEEETTCEEEEECTTTCCE-EEEEE-SCCSCEEEEEECSSCTTEEEEEETTSCEEE--EETTTTEEEEEECSTTSCSS-
T ss_pred EEEecCCCEEEEEEchhceE-eeeec-CCCCcEEEEEECCCCCCEEEEEeCCCeEEE--EEeecCeEEEEecccccccC-
Confidence 58899999999999998864 44444 3566899999999 8999999999999999 777777776666 34543
Q ss_pred ceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceee
Q 032092 77 SETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRL 144 (147)
Q Consensus 77 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~ 144 (147)
.+.++ +|+|++++|++|+.||.|++||+++++.+
T Consensus 163 ----~v~~~------------------------------~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 196 (366)
T 3k26_A 163 ----EVLSA------------------------------DYDLLGEKIMSCGMDHSLKLWRINSKRMM 196 (366)
T ss_dssp ----CEEEE------------------------------EECTTSSEEEEEETTSCEEEEESCSHHHH
T ss_pred ----ceeEE------------------------------EECCCCCEEEEecCCCCEEEEECCCCccc
Confidence 35555 99999999999999999999999987654
No 84
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.77 E-value=6.2e-18 Score=128.40 Aligned_cols=107 Identities=11% Similarity=0.140 Sum_probs=81.9
Q ss_pred CeEeecCCeEEEEECC---------CCccceeEecCCCCcceEEEEEcc--CCCEEEEEeeCCeEEEEeecCCCCcceeE
Q 032092 1 MVVGTADRNLVVFNLQ---------NPQTEFKRINSPLKYQMRCVAAFP--DQQGFWVGSIEGRVGVHHLDDSQQSKNFT 69 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~---------~~~~~~~~~~~~~~~~i~~la~sp--dg~~l~~g~~dg~i~i~~~d~~~~~~~~~ 69 (147)
+++|+.|++|++|+.. +++ ........+..+|.+++|+| ++++|++|+.||+|++ ||.++++....
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~--wd~~~~~~~~~ 164 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNK-VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGF--QSYEDDSQYIV 164 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCC-EEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEE--EESSSSCEEEE
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcc-eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEE--EECCCCcEEEE
Confidence 5789999999999766 332 12333334446799999999 9999999999999999 77776666544
Q ss_pred EEeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceee
Q 032092 70 FKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRL 144 (147)
Q Consensus 70 ~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~ 144 (147)
+..+... .+.++ +|+|+|++||+|+.||.|+|||+++++.+
T Consensus 165 ~~~~~~~----~i~~~------------------------------~~~pdg~~lasg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 165 HSAKSDV----EYSSG------------------------------VLHKDSLLLALYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp ECCCSSC----CCCEE------------------------------EECTTSCEEEEECTTSCEEEEESSCTTSC
T ss_pred EecCCCC----ceEEE------------------------------EECCCCCEEEEEcCCCEEEEEECCCCCCC
Confidence 4333221 25555 99999999999999999999999998765
No 85
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.77 E-value=2.3e-17 Score=127.68 Aligned_cols=141 Identities=11% Similarity=0.124 Sum_probs=100.2
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCce--
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE-- 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~-- 78 (147)
|++|+.||.|++||++........+. .+..+|.+++|+|++++|++|+.||.|++ ||.++++....+..|.....
T Consensus 189 l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~v~i--wd~~~~~~~~~~~~~~~~v~~~ 265 (401)
T 4aez_A 189 LSSGSRSGAIHHHDVRIANHQIGTLQ-GHSSEVCGLAWRSDGLQLASGGNDNVVQI--WDARSSIPKFTKTNHNAAVKAV 265 (401)
T ss_dssp EEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSCEEE--EETTCSSEEEEECCCSSCCCEE
T ss_pred EEEEcCCCCEEEEecccCcceeeEEc-CCCCCeeEEEEcCCCCEEEEEeCCCeEEE--ccCCCCCccEEecCCcceEEEE
Confidence 57899999999999996544444443 35668999999999999999999999999 78777888888887776432
Q ss_pred EEeeccceeeeec--CCCcceeeeeee--eeeeee---eceEEEEEecCCCeEEE--eCCCCcEEEeecCCceee
Q 032092 79 TCSVISFTSILAG--DAPKYSSFYKVK--RLHLFV---KSHVIVLFVQIHHTFAT--AGSDGAFNFWDKDSKQRL 144 (147)
Q Consensus 79 ~~~v~~~~~~~~~--~~~~~~~~~~~~--~~~~~~---~~~~~~~fspdg~~lat--g~~Dg~i~iWd~~~~~~~ 144 (147)
.+....-.++++| +.++...++++. +....+ .....++|+|+++.|++ |+.||.|++||+.+++..
T Consensus 266 ~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~ 340 (401)
T 4aez_A 266 AWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLT 340 (401)
T ss_dssp EECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEE
T ss_pred EECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccce
Confidence 3333333344443 345433333322 222222 23467999999999998 558999999999886544
No 86
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.77 E-value=1e-17 Score=129.45 Aligned_cols=140 Identities=14% Similarity=0.150 Sum_probs=100.5
Q ss_pred CeEeecCCeEEEEECCCCc------cceeEecCCCCcceEEEEEccCC-CEEEEEeeCCeEEEEeecCCCCcceeEE--E
Q 032092 1 MVVGTADRNLVVFNLQNPQ------TEFKRINSPLKYQMRCVAAFPDQ-QGFWVGSIEGRVGVHHLDDSQQSKNFTF--K 71 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~------~~~~~~~~~~~~~i~~la~spdg-~~l~~g~~dg~i~i~~~d~~~~~~~~~~--~ 71 (147)
|++|+.||+|+|||+.+++ .+...+. .|...|.+++|+|++ +.|++|+.||+|++ ||.++++...++ .
T Consensus 97 l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~dg~i~i--wd~~~~~~~~~~~~~ 173 (402)
T 2aq5_A 97 IASGSEDCTVMVWEIPDGGLVLPLREPVITLE-GHTKRVGIVAWHPTAQNVLLSAGCDNVILV--WDVGTGAAVLTLGPD 173 (402)
T ss_dssp EEEEETTSEEEEEECCTTCCSSCBCSCSEEEE-CCSSCEEEEEECSSBTTEEEEEETTSCEEE--EETTTTEEEEEECTT
T ss_pred EEEEeCCCeEEEEEccCCCCccccCCceEEec-CCCCeEEEEEECcCCCCEEEEEcCCCEEEE--EECCCCCccEEEecC
Confidence 5899999999999999873 2333343 455689999999998 69999999999999 777778888888 6
Q ss_pred eccCCce--EEeeccceeeeecCCCcceeeeee-eeeeeee-ece-----EEEEEecCCCeEEEe---CCCCcEEEeecC
Q 032092 72 CHRDGSE--TCSVISFTSILAGDAPKYSSFYKV-KRLHLFV-KSH-----VIVLFVQIHHTFATA---GSDGAFNFWDKD 139 (147)
Q Consensus 72 ~h~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~-----~~~~fspdg~~latg---~~Dg~i~iWd~~ 139 (147)
+|..... .+..+.-.+++++.|..++++..- .+....+ .+| ..++|+|++++|++| +.|+.|++||++
T Consensus 174 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 174 VHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTK 253 (402)
T ss_dssp TCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETT
T ss_pred CCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCc
Confidence 6765432 333333334444555555554421 1223333 344 468999999999999 899999999998
Q ss_pred Ccee
Q 032092 140 SKQR 143 (147)
Q Consensus 140 ~~~~ 143 (147)
+++.
T Consensus 254 ~~~~ 257 (402)
T 2aq5_A 254 HLEE 257 (402)
T ss_dssp BCSS
T ss_pred cccC
Confidence 7643
No 87
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.76 E-value=4.1e-18 Score=132.73 Aligned_cols=100 Identities=18% Similarity=0.275 Sum_probs=83.0
Q ss_pred EeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEe--eCCeEEEEeecCCCCcceeEEEeccCCceEE
Q 032092 3 VGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGS--IEGRVGVHHLDDSQQSKNFTFKCHRDGSETC 80 (147)
Q Consensus 3 ~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~--~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~ 80 (147)
+|+.|++|++||+++++. ...+.. ..++.++.|+|+++.+++++ .||+|+| ||..+++.+.++.+|..
T Consensus 296 ~gs~D~~I~iwd~~t~~~-~~~~~~--~~~v~~~~~~~~~~~lv~~sg~~d~~I~i--wd~~~~~~v~~l~gH~~----- 365 (420)
T 4gga_A 296 GGTSDRHIRIWNVCSGAC-LSAVDA--HSQVCSILWSPHYKELISGHGFAQNQLVI--WKYPTMAKVAELKGHTS----- 365 (420)
T ss_dssp ECTTTCEEEEEETTTTEE-EEEEEC--SSCEEEEEEETTTTEEEEEECTTTCCEEE--EETTTCCEEEEECCCSS-----
T ss_pred eecCCCEEEEEeCCcccc-ceeecc--ccceeeeeecCCCCeEEEEEecCCCEEEE--EECCCCcEEEEEcCCCC-----
Confidence 456899999999999864 344432 24689999999999988765 7999999 77788899999999976
Q ss_pred eeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCce
Q 032092 81 SVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQ 142 (147)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~ 142 (147)
.|.++ +|+|||++||||+.|++|+|||+.+..
T Consensus 366 ~V~~l------------------------------~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 366 RVLSL------------------------------TMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp CEEEE------------------------------EECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred CEEEE------------------------------EEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 46666 999999999999999999999987643
No 88
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.76 E-value=1.2e-17 Score=127.86 Aligned_cols=137 Identities=11% Similarity=0.060 Sum_probs=101.0
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCce--
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE-- 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~-- 78 (147)
+++|+.||.|++||+++++. ...+. .+..+|.+++|+|++++|++++.||.|++ ||.++++....+.+|.....
T Consensus 220 ~~~~~~~g~i~~~d~~~~~~-~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~i--~d~~~~~~~~~~~~~~~~i~~~ 295 (425)
T 1r5m_A 220 FVIPGPKGAIFVYQITEKTP-TGKLI-GHHGPISVLEFNDTNKLLLSASDDGTLRI--WHGGNGNSQNCFYGHSQSIVSA 295 (425)
T ss_dssp EEEECGGGCEEEEETTCSSC-SEEEC-CCSSCEEEEEEETTTTEEEEEETTSCEEE--ECSSSBSCSEEECCCSSCEEEE
T ss_pred EEEEcCCCeEEEEEcCCCce-eeeec-cCCCceEEEEECCCCCEEEEEcCCCEEEE--EECCCCccceEecCCCccEEEE
Confidence 47889999999999998753 34443 45568999999999999999999999999 78777788888877766432
Q ss_pred EEeeccceeeeecCCCcceeeee-eeeeeeeeec----eEEEEEecCCCeEEEeCCCCcEEEeecCCce
Q 032092 79 TCSVISFTSILAGDAPKYSSFYK-VKRLHLFVKS----HVIVLFVQIHHTFATAGSDGAFNFWDKDSKQ 142 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~fspdg~~latg~~Dg~i~iWd~~~~~ 142 (147)
.+.... .+++++.+..+.++.. ..+....+.+ ...++|+|++++|++|+.||.|++||+++++
T Consensus 296 ~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 296 SWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred EECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 333334 3344454444444441 1122333333 3578999999999999999999999998776
No 89
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.76 E-value=1.2e-17 Score=131.22 Aligned_cols=141 Identities=13% Similarity=0.073 Sum_probs=99.4
Q ss_pred eEeecCCeEEEEECC--CCccceeEecC-CCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcce----eEEEecc
Q 032092 2 VVGTADRNLVVFNLQ--NPQTEFKRINS-PLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKN----FTFKCHR 74 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~--~~~~~~~~~~~-~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~----~~~~~h~ 74 (147)
++|+.||.|+|||+. +++. ...+.. .+...|.+++|+|++++|++|+.||.|++ |+..+++.. ..+.+|.
T Consensus 119 ~~~~~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~--~~~~~~~~~~~~~~~~~~h~ 195 (450)
T 2vdu_B 119 ACADSDKSLLVFDVDKTSKNV-LKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYS--IDINSIPEEKFTQEPILGHV 195 (450)
T ss_dssp EEEGGGTEEEEEEECSSSSSC-EEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEE--EETTSCCCSSCCCCCSEECS
T ss_pred EEECCCCeEEEEECcCCCCce-eeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEE--EecCCcccccccceeeeccc
Confidence 788999999999999 6643 344321 23456999999999999999999999998 666554433 2667787
Q ss_pred CCce--EEeec---cceeeeecCCCcceeeeeee-eeeee-eece----EEEEEecCCCeEEEeCCCCcEEEeecCCcee
Q 032092 75 DGSE--TCSVI---SFTSILAGDAPKYSSFYKVK-RLHLF-VKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQR 143 (147)
Q Consensus 75 ~~~~--~~~v~---~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~ 143 (147)
.... .+..+ ...+++++.|..+++|..-. +.... +.+| ..++|+ ++++|++|+.|+.|++||++++++
T Consensus 196 ~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 196 SMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKN 274 (450)
T ss_dssp SCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCE
T ss_pred CceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcE
Confidence 6432 34444 33344555555555544211 22222 3455 579999 999999999999999999999987
Q ss_pred eec
Q 032092 144 LKV 146 (147)
Q Consensus 144 ~~~ 146 (147)
+++
T Consensus 275 ~~~ 277 (450)
T 2vdu_B 275 LST 277 (450)
T ss_dssp EEE
T ss_pred eee
Confidence 764
No 90
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.76 E-value=5e-18 Score=130.34 Aligned_cols=106 Identities=12% Similarity=0.164 Sum_probs=89.5
Q ss_pred CeEeecCC---eEEEEECCCCccceeEecCCCCcceEEEEEcc-CCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCC
Q 032092 1 MVVGTADR---NLVVFNLQNPQTEFKRINSPLKYQMRCVAAFP-DQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDG 76 (147)
Q Consensus 1 l~~gs~dg---~v~iwdi~~~~~~~~~~~~~~~~~i~~la~sp-dg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~ 76 (147)
|++|+.|+ .|++||+++++++...+...+..+|.+++|+| ++++|++|+.||+|++ ||.++++.+.++.+|..
T Consensus 230 l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~--wd~~~~~~~~~~~~~~~- 306 (416)
T 2pm9_A 230 VATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLL--WNPESAEQLSQFPARGN- 306 (416)
T ss_dssp EEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEE--ECSSSCCEEEEEECSSS-
T ss_pred EEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEE--eeCCCCccceeecCCCC-
Confidence 47888898 99999999875554444314556899999999 8999999999999999 78888888888888875
Q ss_pred ceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCC-CeEEEeCCCCcEEEeecCCcee
Q 032092 77 SETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIH-HTFATAGSDGAFNFWDKDSKQR 143 (147)
Q Consensus 77 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg-~~latg~~Dg~i~iWd~~~~~~ 143 (147)
.+.++ +|+|++ ++|++++.||.|+|||+++.+.
T Consensus 307 ----~v~~~------------------------------~~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 307 ----WCFKT------------------------------KFAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp ----CCCCE------------------------------EECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred ----ceEEE------------------------------EECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 46677 999999 8999999999999999987653
No 91
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.76 E-value=5.8e-18 Score=135.70 Aligned_cols=135 Identities=13% Similarity=0.245 Sum_probs=97.7
Q ss_pred CeEeec-CCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEe-ccCCce
Q 032092 1 MVVGTA-DRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKC-HRDGSE 78 (147)
Q Consensus 1 l~~gs~-dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~-h~~~~~ 78 (147)
|++|+. ||.|++||+.+++.... ....+..+|.+++|+|++++|++|+.||.|++ ||..+++.+..+.+ |.....
T Consensus 459 l~~~~~~d~~i~~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~i--w~~~~~~~~~~~~~~h~~~v~ 535 (615)
T 1pgu_A 459 VAVGLEEGNTIQVFKLSDLEVSFD-LKTPLRAKPSYISISPSETYIAAGDVMGKILL--YDLQSREVKTSRWAFRTSKIN 535 (615)
T ss_dssp EEEEETTTSCEEEEETTEEEEEEE-CSSCCSSCEEEEEECTTSSEEEEEETTSCEEE--EETTTTEEEECCSCCCSSCEE
T ss_pred EEEeecCCCeEEEEECCCcccccc-ccCCccCceEEEEECCCCCEEEEcCCCCeEEE--eeCCCCcceeEeecCCCCcee
Confidence 477888 99999999998643112 22245568999999999999999999999999 77777777777776 766533
Q ss_pred --EEee----------ccceeeeecCCC-cceeeeeee--eeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecC
Q 032092 79 --TCSV----------ISFTSILAGDAP-KYSSFYKVK--RLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKD 139 (147)
Q Consensus 79 --~~~v----------~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~ 139 (147)
.+.. +.- .+++++++ .+++|.... +....+.+| ..++|+|+++ |++++.||.|++||++
T Consensus 536 ~~~~sp~~~~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 536 AISWKPAEKGANEEEIEED-LVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp EEEECCCC------CCSCC-EEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC
T ss_pred EEEEcCccccccccccCCC-EEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeee
Confidence 3434 333 44444444 455444222 334455555 5799999999 9999999999999987
Q ss_pred C
Q 032092 140 S 140 (147)
Q Consensus 140 ~ 140 (147)
+
T Consensus 614 ~ 614 (615)
T 1pgu_A 614 L 614 (615)
T ss_dssp -
T ss_pred c
Confidence 5
No 92
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.76 E-value=7.2e-17 Score=121.31 Aligned_cols=140 Identities=11% Similarity=0.018 Sum_probs=98.7
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCc--e
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGS--E 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~--~ 78 (147)
|++|+.||.|++||+.+++. ...+. .+..+|.+++|+|++++|++++.||.|++ ||..+++....+. |.... .
T Consensus 47 l~~~~~dg~i~vwd~~~~~~-~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~i~i--wd~~~~~~~~~~~-~~~~v~~~ 121 (369)
T 3zwl_B 47 LFSCSKDSSASVWYSLNGER-LGTLD-GHTGTIWSIDVDCFTKYCVTGSADYSIKL--WDVSNGQCVATWK-SPVPVKRV 121 (369)
T ss_dssp EEEEESSSCEEEEETTTCCE-EEEEC-CCSSCEEEEEECTTSSEEEEEETTTEEEE--EETTTCCEEEEEE-CSSCEEEE
T ss_pred EEEEeCCCEEEEEeCCCchh-hhhhh-hcCCcEEEEEEcCCCCEEEEEeCCCeEEE--EECCCCcEEEEee-cCCCeEEE
Confidence 57899999999999999863 44443 45668999999999999999999999999 7777777777776 44332 2
Q ss_pred EEeeccceeeeecCC-----Ccceeeeeeee-------------eeeeee------ceEEEEEecCCCeEEEeCCCCcEE
Q 032092 79 TCSVISFTSILAGDA-----PKYSSFYKVKR-------------LHLFVK------SHVIVLFVQIHHTFATAGSDGAFN 134 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~-----~~~~~~~~~~~-------------~~~~~~------~~~~~~fspdg~~latg~~Dg~i~ 134 (147)
.+..+...+++++.+ ..+.++. +.. ....+. ....++|+|++++|++|+.||.|+
T Consensus 122 ~~~~~~~~l~~~~~~~~~~~g~i~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 200 (369)
T 3zwl_B 122 EFSPCGNYFLAILDNVMKNPGSINIYE-IERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKIS 200 (369)
T ss_dssp EECTTSSEEEEEECCBTTBCCEEEEEE-EEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEE
T ss_pred EEccCCCEEEEecCCccCCCCEEEEEE-ecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEE
Confidence 333334334444444 3333332 211 111122 345789999999999999999999
Q ss_pred EeecCC-ceeeec
Q 032092 135 FWDKDS-KQRLKV 146 (147)
Q Consensus 135 iWd~~~-~~~~~~ 146 (147)
+||+++ ++.+.+
T Consensus 201 i~d~~~~~~~~~~ 213 (369)
T 3zwl_B 201 KYDVSNNYEYVDS 213 (369)
T ss_dssp EEETTTTTEEEEE
T ss_pred EEECCCCcEeEEE
Confidence 999998 565543
No 93
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.76 E-value=4.2e-17 Score=120.44 Aligned_cols=137 Identities=13% Similarity=0.092 Sum_probs=96.9
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecC-CCCcceeEEEeccCCceE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDD-SQQSKNFTFKCHRDGSET 79 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~-~~~~~~~~~~~h~~~~~~ 79 (147)
|++|+.||.|++||+.+++. ...+. .+..+|.+++|+|++++|++|+.||.|++|++.. ...+....+.+|......
T Consensus 32 l~s~~~dg~v~vw~~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~ 109 (313)
T 3odt_A 32 VASVSRDGTVRLWSKDDQWL-GTVVY-TGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCS 109 (313)
T ss_dssp EEEEETTSEEEEEEESSSEE-EEEEE-ECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEE
T ss_pred EEEEEcCCcEEEEECCCCEE-EEEee-cCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEE
Confidence 58999999999999988753 23333 3456899999999999999999999999954432 234556777778765443
Q ss_pred EeeccceeeeecCCCcceeeeeeeeeeeeeece----EEEEEec-CCCeEEEeCCCCcEEEeecCC
Q 032092 80 CSVISFTSILAGDAPKYSSFYKVKRLHLFVKSH----VIVLFVQ-IHHTFATAGSDGAFNFWDKDS 140 (147)
Q Consensus 80 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~fsp-dg~~latg~~Dg~i~iWd~~~ 140 (147)
.....-.+++++.+..+.++. ..+....+.+| ..++|+| ++++|++++.||.|++||..+
T Consensus 110 ~~~~~~~l~~~~~d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 174 (313)
T 3odt_A 110 LSFQDGVVISGSWDKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK 174 (313)
T ss_dssp EEEETTEEEEEETTSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE
T ss_pred EEecCCEEEEEeCCCCEEEEc-CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc
Confidence 334444344555555555554 33334444444 4688988 889999999999999999543
No 94
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.76 E-value=8.2e-18 Score=124.72 Aligned_cols=101 Identities=18% Similarity=0.238 Sum_probs=83.4
Q ss_pred eEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEe--eCCeEEEEeecCCCCcceeEEEeccCCceE
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGS--IEGRVGVHHLDDSQQSKNFTFKCHRDGSET 79 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~--~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~ 79 (147)
++|+.+++|++||.+..+.. .... +..++..++|+|+++.+++++ .||+|+| ||.++++.+.++++|..
T Consensus 215 ~~~~~~~~i~lwd~~~~~~~-~~~~--~~~~v~~~~~~~~~~~~~~~sg~~d~~i~i--wd~~~~~~~~~l~gH~~---- 285 (318)
T 4ggc_A 215 GGGTSDRHIRIWNVCSGACL-SAVD--AHSQVCSILWSPHYKELISGHGFAQNQLVI--WKYPTMAKVAELKGHTS---- 285 (318)
T ss_dssp EECTTTCEEEEEETTTCCEE-EEEE--CSSCEEEEEEETTTTEEEEEECTTTCCEEE--EETTTCCEEEEECCCSS----
T ss_pred EecCCCCEEEEEeccccccc-cccc--ceeeeeeeeecccccceEEEEEcCCCEEEE--EECCCCcEEEEEcCCCC----
Confidence 46788999999999987542 2222 335689999999999887654 7999999 78888899999999976
Q ss_pred EeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCce
Q 032092 80 CSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQ 142 (147)
Q Consensus 80 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~ 142 (147)
.|.++ +|+|||++|||||.||+|+|||+.+..
T Consensus 286 -~V~~l------------------------------~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 286 -RVLSL------------------------------TMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp -CEEEE------------------------------EECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred -CEEEE------------------------------EEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 46676 999999999999999999999997654
No 95
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.76 E-value=2.2e-17 Score=136.92 Aligned_cols=140 Identities=16% Similarity=0.153 Sum_probs=103.0
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCce--
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE-- 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~-- 78 (147)
||+|+.||.|+|||+++++. ...+. .+..+|++++|+|++++|++|+.||.|++ ||..+++...++.+|.....
T Consensus 28 la~~~~~g~v~iwd~~~~~~-~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~v--w~~~~~~~~~~~~~~~~~v~~~ 103 (814)
T 3mkq_A 28 VLTTLYSGRVEIWNYETQVE-VRSIQ-VTETPVRAGKFIARKNWIIVGSDDFRIRV--FNYNTGEKVVDFEAHPDYIRSI 103 (814)
T ss_dssp EEEEETTSEEEEEETTTTEE-EEEEE-CCSSCEEEEEEEGGGTEEEEEETTSEEEE--EETTTCCEEEEEECCSSCEEEE
T ss_pred EEEEeCCCEEEEEECCCCce-EEEEe-cCCCcEEEEEEeCCCCEEEEEeCCCeEEE--EECCCCcEEEEEecCCCCEEEE
Confidence 57899999999999999854 44444 45678999999999999999999999999 67777888888988876533
Q ss_pred EEeeccceeeeecCCCcceeeeee--eeeeeeeece----EEEEEec-CCCeEEEeCCCCcEEEeecCCceee
Q 032092 79 TCSVISFTSILAGDAPKYSSFYKV--KRLHLFVKSH----VIVLFVQ-IHHTFATAGSDGAFNFWDKDSKQRL 144 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~fsp-dg~~latg~~Dg~i~iWd~~~~~~~ 144 (147)
.+..+.-.+++++.+..+.++..- ......+.+| ..++|+| +++.|++|+.||.|++||+.+++..
T Consensus 104 ~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~ 176 (814)
T 3mkq_A 104 AVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN 176 (814)
T ss_dssp EECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCS
T ss_pred EEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcce
Confidence 333333333344444444444311 1233445554 5789999 8899999999999999999876544
No 96
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.75 E-value=5.2e-18 Score=131.87 Aligned_cols=108 Identities=8% Similarity=0.095 Sum_probs=86.4
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCC-CCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEE-eccCCce
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSP-LKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFK-CHRDGSE 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~-~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~-~h~~~~~ 78 (147)
|++|+.||.|++||+++++. ...+..+ +..+|++++|+|++++|++|+.||+|++ ||.++++.+.++. .|..
T Consensus 185 l~~~~~d~~i~iwd~~~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~i--wd~~~~~~~~~~~~~~~~--- 258 (437)
T 3gre_A 185 LVALTNLSRVIIFDIRTLER-LQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDI--WDIRFNVLIRSWSFGDHA--- 258 (437)
T ss_dssp EEEEETTSEEEEEETTTCCE-EEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEE--EETTTTEEEEEEBCTTCE---
T ss_pred EEEEeCCCeEEEEeCCCCee-eEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEE--EEcCCccEEEEEecCCCC---
Confidence 57899999999999999864 4555432 5568999999999999999999999999 7777777777665 3432
Q ss_pred EEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEE----ecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 79 TCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLF----VQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f----spdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
++.++ +| +|++++|++|+.||.|++||+++++++.+
T Consensus 259 --~v~~~------------------------------~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 259 --PITHV------------------------------EVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYA 298 (437)
T ss_dssp --EEEEE------------------------------EECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEE
T ss_pred --ceEEE------------------------------EeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEE
Confidence 34444 44 45688999999999999999999887764
No 97
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.75 E-value=9.3e-18 Score=128.83 Aligned_cols=137 Identities=13% Similarity=0.174 Sum_probs=95.0
Q ss_pred ecCCeEEEEECCCCcc--ceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCC----CcceeEEEeccCCce
Q 032092 5 TADRNLVVFNLQNPQT--EFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQ----QSKNFTFKCHRDGSE 78 (147)
Q Consensus 5 s~dg~v~iwdi~~~~~--~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~----~~~~~~~~~h~~~~~ 78 (147)
+.||.|+|||+.+++. +...+ .+..+|++++|+|++++|++|+.||.|++ ||..+ .+....+.+|.....
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~v~v--w~~~~~~~~~~~~~~~~~h~~~v~ 117 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASL--QVDSKFNDLDWSHNNKIIAGALDNGSLEL--YSTNEANNAINSMARFSNHSSSVK 117 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCC--CCSSCEEEEEECSSSSCEEEEESSSCEEE--ECCSSTTSCCCEEEECCCSSSCCC
T ss_pred CCCCeEEEEEccCCCCCcEEEEE--ecCCceEEEEECCCCCeEEEEccCCeEEE--eecccccccccchhhccCCccceE
Confidence 8899999999998752 22222 34567999999999999999999999999 55554 246667777876543
Q ss_pred --EEeeccceeeeecCCC-cceeeeeeee--------e---eeeeece----EEEEEecC-CCeEEEeCCCCcEEEeecC
Q 032092 79 --TCSVISFTSILAGDAP-KYSSFYKVKR--------L---HLFVKSH----VIVLFVQI-HHTFATAGSDGAFNFWDKD 139 (147)
Q Consensus 79 --~~~v~~~~~~~~~~~~-~~~~~~~~~~--------~---~~~~~~~----~~~~fspd-g~~latg~~Dg~i~iWd~~ 139 (147)
.+....-.++++++.+ .+.++. +.. . .....+| ..++|+|+ +++|++|+.||.|++||++
T Consensus 118 ~~~~~~~~~~~l~s~~~dg~v~iwd-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 196 (416)
T 2pm9_A 118 TVKFNAKQDNVLASGGNNGEIFIWD-MNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK 196 (416)
T ss_dssp EEEECSSSTTBEEEECSSSCEEBCB-TTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT
T ss_pred EEEEcCCCCCEEEEEcCCCeEEEEE-CCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC
Confidence 3333312345454444 444443 211 1 1112333 57999999 6999999999999999999
Q ss_pred Cceeeec
Q 032092 140 SKQRLKV 146 (147)
Q Consensus 140 ~~~~~~~ 146 (147)
+++.+.+
T Consensus 197 ~~~~~~~ 203 (416)
T 2pm9_A 197 AKKEVIH 203 (416)
T ss_dssp TTEEEEE
T ss_pred CCCcceE
Confidence 9877654
No 98
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.75 E-value=1.9e-17 Score=125.07 Aligned_cols=139 Identities=12% Similarity=0.158 Sum_probs=95.3
Q ss_pred CeEeecCCeEEEEECCCCcc-ceeEecCCCCcceEEEEEccC--CCEEEEEeeCCeEEEEeecCCCCc--ceeEEEeccC
Q 032092 1 MVVGTADRNLVVFNLQNPQT-EFKRINSPLKYQMRCVAAFPD--QQGFWVGSIEGRVGVHHLDDSQQS--KNFTFKCHRD 75 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~-~~~~~~~~~~~~i~~la~spd--g~~l~~g~~dg~i~i~~~d~~~~~--~~~~~~~h~~ 75 (147)
||+|+.||.|+|||+..... ....+ ..|..+|++++|+|+ +++|++|+.||.|++ ||..+++ ....+.+|..
T Consensus 26 l~~~~~dg~i~iw~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~i--wd~~~~~~~~~~~~~~~~~ 102 (379)
T 3jrp_A 26 LATCSSDKTIKIFEVEGETHKLIDTL-TGHEGPVWRVDWAHPKFGTILASCSYDGKVLI--WKEENGRWSQIAVHAVHSA 102 (379)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSCEEE--EEEETTEEEEEEEECCCSS
T ss_pred EEEEECCCcEEEEecCCCcceeeeEe-cCCCCcEEEEEeCCCCCCCEEEEeccCCEEEE--EEcCCCceeEeeeecCCCc
Confidence 58899999999999985422 22333 346678999999987 999999999999999 5555454 5566666765
Q ss_pred Cce--EEeec--cceeeeecCCCcceeeeeee---eeeeeeece----EEEEEec-------------CCCeEEEeCCCC
Q 032092 76 GSE--TCSVI--SFTSILAGDAPKYSSFYKVK---RLHLFVKSH----VIVLFVQ-------------IHHTFATAGSDG 131 (147)
Q Consensus 76 ~~~--~~~v~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~fsp-------------dg~~latg~~Dg 131 (147)
... .+... ...+++++.+..+.++.... .....+.+| ..++|+| ++++|++|+.||
T Consensus 103 ~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 182 (379)
T 3jrp_A 103 SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 182 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTS
T ss_pred ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC
Confidence 433 23333 22344445555555444211 112234444 5799999 689999999999
Q ss_pred cEEEeecCCce
Q 032092 132 AFNFWDKDSKQ 142 (147)
Q Consensus 132 ~i~iWd~~~~~ 142 (147)
.|++||+++++
T Consensus 183 ~i~i~d~~~~~ 193 (379)
T 3jrp_A 183 LVKIWKYNSDA 193 (379)
T ss_dssp CEEEEEEETTT
T ss_pred eEEEEEecCCC
Confidence 99999987653
No 99
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.75 E-value=5.2e-17 Score=127.09 Aligned_cols=138 Identities=15% Similarity=0.226 Sum_probs=97.8
Q ss_pred CeEeecCCeEEEEECCCCc--cceeEecCCCCcceEEEEEccCCC-EEEEEeeCCeEEEEeecCCC-CcceeEEEeccCC
Q 032092 1 MVVGTADRNLVVFNLQNPQ--TEFKRINSPLKYQMRCVAAFPDQQ-GFWVGSIEGRVGVHHLDDSQ-QSKNFTFKCHRDG 76 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~--~~~~~~~~~~~~~i~~la~spdg~-~l~~g~~dg~i~i~~~d~~~-~~~~~~~~~h~~~ 76 (147)
|++|+.||.|++||+++++ ++...+. .+..+|++|+|+|+++ .|++|+.||+|++ ||.++ ...+.++.+|...
T Consensus 247 l~s~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~v~~i~~~p~~~~~l~tg~~dg~v~v--wd~~~~~~~~~~~~~h~~~ 323 (430)
T 2xyi_A 247 FGSVADDQKLMIWDTRNNNTSKPSHTVD-AHTAEVNCLSFNPYSEFILATGSADKTVAL--WDLRNLKLKLHSFESHKDE 323 (430)
T ss_dssp EEEEETTSEEEEEETTCSCSSSCSEEEE-CCSSCEEEEEECSSCTTEEEEEETTSEEEE--EETTCTTSCSEEEECCSSC
T ss_pred EEEEeCCCeEEEEECCCCCCCcceeEee-cCCCCeEEEEeCCCCCCEEEEEeCCCeEEE--EeCCCCCCCeEEeecCCCC
Confidence 4789999999999999873 3334443 4556799999999987 6889999999999 67665 4567788888765
Q ss_pred ce--EEeeccceeeee-cCCCcceeeeeee---------------eeeeeeece----EEEEEecCCC-eEEEeCCCCcE
Q 032092 77 SE--TCSVISFTSILA-GDAPKYSSFYKVK---------------RLHLFVKSH----VIVLFVQIHH-TFATAGSDGAF 133 (147)
Q Consensus 77 ~~--~~~v~~~~~~~~-~~~~~~~~~~~~~---------------~~~~~~~~~----~~~~fspdg~-~latg~~Dg~i 133 (147)
.. .+....-.++++ +.+..+.+|..-. .......+| ..++|+|+++ +|++++.||.|
T Consensus 324 v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i 403 (430)
T 2xyi_A 324 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIM 403 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEE
T ss_pred EEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCE
Confidence 33 333333233444 4555555443211 223334454 5699999998 89999999999
Q ss_pred EEeecCCc
Q 032092 134 NFWDKDSK 141 (147)
Q Consensus 134 ~iWd~~~~ 141 (147)
+||++.+.
T Consensus 404 ~iw~~~~~ 411 (430)
T 2xyi_A 404 QVWQMAEN 411 (430)
T ss_dssp EEEEECHH
T ss_pred EEeEcccc
Confidence 99998653
No 100
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.75 E-value=3e-17 Score=123.28 Aligned_cols=139 Identities=15% Similarity=0.191 Sum_probs=94.9
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEE------EccCCCEEEEEeeCCeEEEEeecCCCCc-ceeEEEec
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVA------AFPDQQGFWVGSIEGRVGVHHLDDSQQS-KNFTFKCH 73 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la------~spdg~~l~~g~~dg~i~i~~~d~~~~~-~~~~~~~h 73 (147)
|++|+.||.|++||+.+++.+...+. .+..+|.+++ |+|+++.|++|+.||.|++ ||.++++ ....+..|
T Consensus 83 l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~v--wd~~~~~~~~~~~~~~ 159 (357)
T 3i2n_A 83 LATGDFGGNLHIWNLEAPEMPVYSVK-GHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKV--WDPRQKDDPVANMEPV 159 (357)
T ss_dssp EEEEETTSCEEEECTTSCSSCSEEEC-CCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEE--ECTTSCSSCSEEECCC
T ss_pred EEEecCCCeEEEEeCCCCCccEEEEE-ecccceEEEeeccccccCCCccEEEEEeCCCeEEE--EeCCCCCCcceecccc
Confidence 57899999999999998863445444 4566799994 5789999999999999999 7777665 56677655
Q ss_pred cCC----ce--E----EeeccceeeeecCCC-cceeeeeeee-eeee----eeceEEEEEec---CCCeEEEeCCCCcEE
Q 032092 74 RDG----SE--T----CSVISFTSILAGDAP-KYSSFYKVKR-LHLF----VKSHVIVLFVQ---IHHTFATAGSDGAFN 134 (147)
Q Consensus 74 ~~~----~~--~----~~v~~~~~~~~~~~~-~~~~~~~~~~-~~~~----~~~~~~~~fsp---dg~~latg~~Dg~i~ 134 (147)
... .. . +..+.. .+++++++ .+.++. +.. .... -.....++|+| ++++|++|+.||.|+
T Consensus 160 ~~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~ 237 (357)
T 3i2n_A 160 QGENKRDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFD-LRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFH 237 (357)
T ss_dssp TTSCCCCEEEEEEECCCC-CCC-EEEEEETTSEEEEEE-TTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEE
T ss_pred CCCCCCceEEEEEEeccCCCCC-EEEEEccCCeEEEEE-CccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEE
Confidence 431 11 1 112333 34444444 444443 221 1111 23346799999 999999999999999
Q ss_pred EeecCCceee
Q 032092 135 FWDKDSKQRL 144 (147)
Q Consensus 135 iWd~~~~~~~ 144 (147)
+||+++++.+
T Consensus 238 i~d~~~~~~~ 247 (357)
T 3i2n_A 238 VFDMRTQHPT 247 (357)
T ss_dssp EEEEEEEETT
T ss_pred EEeCcCCCcc
Confidence 9999876654
No 101
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.75 E-value=4.6e-17 Score=123.07 Aligned_cols=136 Identities=8% Similarity=0.023 Sum_probs=90.6
Q ss_pred CeEeecCCeEEEEECCCCcc-ceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEE--EeccCCc
Q 032092 1 MVVGTADRNLVVFNLQNPQT-EFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTF--KCHRDGS 77 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~-~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~--~~h~~~~ 77 (147)
|++|+.||.|++||+.+++. ....+. .+..+|.+++|+|++++|++|+.||.|++| |..+++....+ ..|....
T Consensus 23 l~~~~~d~~v~i~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~dg~i~vw--d~~~~~~~~~~~~~~~~~~v 99 (372)
T 1k8k_C 23 IAICPNNHEVHIYEKSGNKWVQVHELK-EHNGQVTGVDWAPDSNRIVTCGTDRNAYVW--TLKGRTWKPTLVILRINRAA 99 (372)
T ss_dssp EEEECSSSEEEEEEEETTEEEEEEEEE-CCSSCEEEEEEETTTTEEEEEETTSCEEEE--EEETTEEEEEEECCCCSSCE
T ss_pred EEEEeCCCEEEEEeCCCCcEEeeeeec-CCCCcccEEEEeCCCCEEEEEcCCCeEEEE--ECCCCeeeeeEEeecCCCce
Confidence 57888999999999998741 233443 456689999999999999999999999995 54444433333 4454432
Q ss_pred e--EEeeccceeeeecCCCcceeeeeee-e---eeeee-ec----eEEEEEecCCCeEEEeCCCCcEEEeecC
Q 032092 78 E--TCSVISFTSILAGDAPKYSSFYKVK-R---LHLFV-KS----HVIVLFVQIHHTFATAGSDGAFNFWDKD 139 (147)
Q Consensus 78 ~--~~~v~~~~~~~~~~~~~~~~~~~~~-~---~~~~~-~~----~~~~~fspdg~~latg~~Dg~i~iWd~~ 139 (147)
. .+..+.-.+++++.+..+.++.... . ....+ .+ ...++|+|++++|++|+.||.|++||++
T Consensus 100 ~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 100 RCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp EEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred eEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 2 2333333334444444444433111 1 11222 33 3579999999999999999999999953
No 102
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.74 E-value=9.7e-17 Score=125.34 Aligned_cols=138 Identities=14% Similarity=0.186 Sum_probs=98.6
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETC 80 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~ 80 (147)
|++|+.||.|++||+.+++. ...+. .+..+|.+++| +++.|++|+.||+|++ ||..+++...++.+|.......
T Consensus 146 l~~g~~dg~i~iwd~~~~~~-~~~~~-~h~~~v~~l~~--~~~~l~sg~~dg~i~v--wd~~~~~~~~~~~~h~~~v~~l 219 (435)
T 1p22_A 146 IVSGLRDNTIKIWDKNTLEC-KRILT-GHTGSVLCLQY--DERVIITGSSDSTVRV--WDVNTGEMLNTLIHHCEAVLHL 219 (435)
T ss_dssp EEEEESSSCEEEEESSSCCE-EEEEC-CCSSCEEEEEC--CSSEEEEEETTSCEEE--EESSSCCEEEEECCCCSCEEEE
T ss_pred EEEEeCCCeEEEEeCCCCeE-EEEEc-CCCCcEEEEEE--CCCEEEEEcCCCeEEE--EECCCCcEEEEEcCCCCcEEEE
Confidence 57899999999999999864 34443 45668999988 7899999999999999 7777788888888887654444
Q ss_pred eeccceeeeecCCCcceeeeeee----eeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 81 SVISFTSILAGDAPKYSSFYKVK----RLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
....-.+++++.+..+.++.... .....+.+| ..++| ++++|++|+.||.|++||+++++++++
T Consensus 220 ~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~ 291 (435)
T 1p22_A 220 RFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRT 291 (435)
T ss_dssp ECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEE
Confidence 44443344445444554443211 111344555 34555 788999999999999999988887764
No 103
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.73 E-value=2.9e-17 Score=125.63 Aligned_cols=108 Identities=13% Similarity=0.212 Sum_probs=83.5
Q ss_pred CeEeecCCeEEEEEC----CCCcc-----ceeEecCC---------CCcceEEEEEccCCCEEEEEeeCCeEEEEeecCC
Q 032092 1 MVVGTADRNLVVFNL----QNPQT-----EFKRINSP---------LKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDS 62 (147)
Q Consensus 1 l~~gs~dg~v~iwdi----~~~~~-----~~~~~~~~---------~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~ 62 (147)
||+|+.||.|++||+ .+++. +...+..+ +..+|.+++|+|++++|++|+.||.|++ || .
T Consensus 61 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i--~~-~ 137 (425)
T 1r5m_A 61 LAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRL--WN-K 137 (425)
T ss_dssp EEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEE--EE-T
T ss_pred EEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEE--Ee-C
Confidence 588999999999999 87752 12222221 3447999999999999999999999999 55 4
Q ss_pred CCcceeEEEeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCce
Q 032092 63 QQSKNFTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQ 142 (147)
Q Consensus 63 ~~~~~~~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~ 142 (147)
+++....+.+|.. ++.++ +|+|++++|++++.||.|++||+++++
T Consensus 138 ~~~~~~~~~~~~~-----~v~~~------------------------------~~~~~~~~l~~~~~d~~i~iwd~~~~~ 182 (425)
T 1r5m_A 138 TGALLNVLNFHRA-----PIVSV------------------------------KWNKDGTHIISMDVENVTILWNVISGT 182 (425)
T ss_dssp TSCEEEEECCCCS-----CEEEE------------------------------EECTTSSEEEEEETTCCEEEEETTTTE
T ss_pred CCCeeeeccCCCc-----cEEEE------------------------------EECCCCCEEEEEecCCeEEEEECCCCc
Confidence 5677777777764 35565 999999999999999999999999988
Q ss_pred eeec
Q 032092 143 RLKV 146 (147)
Q Consensus 143 ~~~~ 146 (147)
.+.+
T Consensus 183 ~~~~ 186 (425)
T 1r5m_A 183 VMQH 186 (425)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7764
No 104
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.73 E-value=3e-17 Score=123.51 Aligned_cols=108 Identities=8% Similarity=0.165 Sum_probs=87.4
Q ss_pred CeEeecCCeEEEEECCCCccceeEec---C-CCCcceEEEEEccC----CCEEEEEeeCCeEEEEeecCCCCcceeEEEe
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRIN---S-PLKYQMRCVAAFPD----QQGFWVGSIEGRVGVHHLDDSQQSKNFTFKC 72 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~---~-~~~~~i~~la~spd----g~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~ 72 (147)
+++++.++.|++||+.+++. ...+. . .+...|.+++|+|+ +++|++|+.||.|++ ||..+++.+..+.+
T Consensus 37 ~~~~~~~~~v~vw~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v--~d~~~~~~~~~~~~ 113 (366)
T 3k26_A 37 VFATVGSNRVTLYECHSQGE-IRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRI--INPITMQCIKHYVG 113 (366)
T ss_dssp EEEEEETTEEEEEEECGGGC-EEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEE--ECTTTCCEEEEEES
T ss_pred EEEECCCCEEEEEEcCCCcE-EEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEE--EEchhceEeeeecC
Confidence 35667788999999997653 22222 1 24457999999999 679999999999999 78777888888888
Q ss_pred ccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEec-CCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 73 HRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQ-IHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 73 h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fsp-dg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
|.. ++.++ +|+| ++++|++|+.||.|++||+++++.+..
T Consensus 114 ~~~-----~i~~~------------------------------~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 153 (366)
T 3k26_A 114 HGN-----AINEL------------------------------KFHPRDPNLLLSVSKDHALRLWNIQTDTLVAI 153 (366)
T ss_dssp CCS-----CEEEE------------------------------EECSSCTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CCC-----cEEEE------------------------------EECCCCCCEEEEEeCCCeEEEEEeecCeEEEE
Confidence 875 36666 9999 889999999999999999999887654
No 105
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.73 E-value=1.2e-16 Score=133.44 Aligned_cols=138 Identities=14% Similarity=0.185 Sum_probs=96.4
Q ss_pred CeEeecCCeEEEEECCCCcc-ceeEecCCCCcceEEEEEccC--CCEEEEEeeCCeEEEEeecCCCC--cceeEEEeccC
Q 032092 1 MVVGTADRNLVVFNLQNPQT-EFKRINSPLKYQMRCVAAFPD--QQGFWVGSIEGRVGVHHLDDSQQ--SKNFTFKCHRD 75 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~-~~~~~~~~~~~~i~~la~spd--g~~l~~g~~dg~i~i~~~d~~~~--~~~~~~~~h~~ 75 (147)
|++|+.||.|++||+++++. ..... ..+..+|.+++|+|+ ++.+++|+.||+|++ ||.+++ .....+.+|..
T Consensus 70 l~s~s~Dg~I~vwd~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~v--wdl~~~~~~~~~~~~~~~~ 146 (753)
T 3jro_A 70 LASCSYDGKVLIWKEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSV--VEFKENGTTSPIIIDAHAI 146 (753)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEE--EECCSSSCCCCEEEECCSS
T ss_pred EEEEeCCCeEEEEECCCCcccccccc-cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEE--EEeecCCCcceeEeecCCC
Confidence 58999999999999998752 22222 345678999999999 999999999999999 555443 34455666765
Q ss_pred Cce--EEee-------------ccceeeeecCCCcceeeeeee-----eeeeeeece----EEEEEecC---CCeEEEeC
Q 032092 76 GSE--TCSV-------------ISFTSILAGDAPKYSSFYKVK-----RLHLFVKSH----VIVLFVQI---HHTFATAG 128 (147)
Q Consensus 76 ~~~--~~~v-------------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~----~~~~fspd---g~~latg~ 128 (147)
... .+.. +...+++++.+..++++..-. .....+.+| ..++|+|+ +++|++|+
T Consensus 147 ~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 226 (753)
T ss_dssp CEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe
Confidence 432 2222 122234445555555543211 233345555 57999999 89999999
Q ss_pred CCCcEEEeecCCc
Q 032092 129 SDGAFNFWDKDSK 141 (147)
Q Consensus 129 ~Dg~i~iWd~~~~ 141 (147)
.||.|++||+.++
T Consensus 227 ~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 227 QDRTCIIWTQDNE 239 (753)
T ss_dssp SSSCEEEEEESSS
T ss_pred cCCEEEEecCCCC
Confidence 9999999999876
No 106
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.73 E-value=5.6e-17 Score=125.73 Aligned_cols=139 Identities=12% Similarity=0.207 Sum_probs=90.8
Q ss_pred CeEeecCCeEEEEECCCCcc----------ceeEecCCCC------------cceEEEEEccCC--CEEEEEeeCCeEEE
Q 032092 1 MVVGTADRNLVVFNLQNPQT----------EFKRINSPLK------------YQMRCVAAFPDQ--QGFWVGSIEGRVGV 56 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~----------~~~~~~~~~~------------~~i~~la~spdg--~~l~~g~~dg~i~i 56 (147)
||+|+.||.|+|||+.+++. ....+. .|. .+|.+++|+|++ ..|++|+.||+|++
T Consensus 43 la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~i 121 (447)
T 3dw8_B 43 LATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQ-SHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKL 121 (447)
T ss_dssp EEEEETTSEEEEEEECC-----CCCCCCEEEEEEEE-CCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEE
T ss_pred EEEEcCCCeEEEEEecCCCCCCcccccceeEecccc-cccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEE
Confidence 68999999999999998652 123333 344 569999999998 79999999999999
Q ss_pred EeecCCCCcc---------------------------------------eeEE-EeccCCce--EEeeccceeeeecCCC
Q 032092 57 HHLDDSQQSK---------------------------------------NFTF-KCHRDGSE--TCSVISFTSILAGDAP 94 (147)
Q Consensus 57 ~~~d~~~~~~---------------------------------------~~~~-~~h~~~~~--~~~v~~~~~~~~~~~~ 94 (147)
|+++. +.. ...+ .+|..... .+..+.. .+++|.|.
T Consensus 122 w~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~d~ 198 (447)
T 3dw8_B 122 WKISE--RDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYE-TYLSADDL 198 (447)
T ss_dssp EEEEE--EEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSS-EEEEECSS
T ss_pred Eeccc--ccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCC-EEEEeCCC
Confidence 65543 111 0122 34654322 2333333 34445444
Q ss_pred cceeeeee--eeeee-------eeece----EEEEEecCC-CeEEEeCCCCcEEEeecCCcee
Q 032092 95 KYSSFYKV--KRLHL-------FVKSH----VIVLFVQIH-HTFATAGSDGAFNFWDKDSKQR 143 (147)
Q Consensus 95 ~~~~~~~~--~~~~~-------~~~~~----~~~~fspdg-~~latg~~Dg~i~iWd~~~~~~ 143 (147)
.+.++... .+... .+.+| ..++|+|++ ++|++|+.||.|++||+++++.
T Consensus 199 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 199 RINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp EEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred eEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 44444311 11111 23344 579999999 9999999999999999988765
No 107
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.73 E-value=1.1e-16 Score=132.68 Aligned_cols=143 Identities=20% Similarity=0.256 Sum_probs=101.7
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEcc-CCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccC-Cc-
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFP-DQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRD-GS- 77 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~sp-dg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~-~~- 77 (147)
|++|+.||.|++||++++......+. .+..+|.+++|+| +++.|++|+.||+|++ ||.++++....+..|.. ..
T Consensus 112 l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~dg~v~v--wd~~~~~~~~~~~~~~~~~v~ 188 (814)
T 3mkq_A 112 VLSGSDDLTVKLWNWENNWALEQTFE-GHEHFVMCVAFNPKDPSTFASGCLDRTVKV--WSLGQSTPNFTLTTGQERGVN 188 (814)
T ss_dssp EEEEETTSEEEEEEGGGTSEEEEEEE-CCSSCEEEEEEETTEEEEEEEEETTSEEEE--EETTCSSCSEEEECCCTTCCC
T ss_pred EEEEcCCCEEEEEECCCCceEEEEEc-CCCCcEEEEEEEcCCCCEEEEEeCCCeEEE--EECCCCcceeEEecCCCCCEE
Confidence 57899999999999998744333333 4556799999999 8999999999999999 67666677777765542 22
Q ss_pred -eEEee--ccceeeeecCCCcceeeee-eeeeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 78 -ETCSV--ISFTSILAGDAPKYSSFYK-VKRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 78 -~~~~v--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
..+.. +.-.+++++.+..+.++.. ..+....+.+| ..++|+|++++|++|+.||.|++||+.+++.+.+
T Consensus 189 ~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~ 265 (814)
T 3mkq_A 189 YVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKT 265 (814)
T ss_dssp EEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 23333 3333344444444555441 12334444554 4689999999999999999999999998877654
No 108
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.72 E-value=2.4e-16 Score=123.14 Aligned_cols=138 Identities=12% Similarity=0.111 Sum_probs=95.6
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETC 80 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~ 80 (147)
|++|+.||+|++||+.+++. ...+. .|..+|.+++|+ ++.+++|+.||+|++ ||..+++...++.+|.....+.
T Consensus 132 l~sg~~dg~i~vwd~~~~~~-~~~~~-~h~~~v~~~~~~--~~~l~s~~~dg~i~v--wd~~~~~~~~~~~~h~~~v~~~ 205 (445)
T 2ovr_B 132 IVSGSDDNTLKVWSAVTGKC-LRTLV-GHTGGVWSSQMR--DNIIISGSTDRTLKV--WNAETGECIHTLYGHTSTVRCM 205 (445)
T ss_dssp EEEEETTSCEEEEETTTCCE-EEECC-CCSSCEEEEEEE--TTEEEEEETTSCEEE--EETTTTEEEEEECCCSSCEEEE
T ss_pred EEEEECCCcEEEEECCCCcE-EEEEc-CCCCCEEEEEec--CCEEEEEeCCCeEEE--EECCcCcEEEEECCCCCcEEEE
Confidence 57899999999999998863 34443 456689999997 679999999999999 6777788888888887654444
Q ss_pred eeccceeeeecCCCcceeeeee-eeeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 81 SVISFTSILAGDAPKYSSFYKV-KRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
....-.+++++.+..+.++... .+....+.+| ..++| ++++|++|+.||.|++||+++++++++
T Consensus 206 ~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~ 274 (445)
T 2ovr_B 206 HLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHT 274 (445)
T ss_dssp EEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEE
T ss_pred EecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEE
Confidence 4444334444444444444321 2233344454 23454 777888888888888888887776654
No 109
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.71 E-value=3.2e-16 Score=122.45 Aligned_cols=140 Identities=16% Similarity=0.193 Sum_probs=92.5
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETC 80 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~ 80 (147)
|++|+.||+|++||+++++. ...+. .+..++.++++ +++.+++|+.||.|++ ||.++++...++.+|.......
T Consensus 212 l~s~s~dg~i~~wd~~~~~~-~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~i--wd~~~~~~~~~~~~~~~~v~~~ 285 (445)
T 2ovr_B 212 VVSGSRDATLRVWDIETGQC-LHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKV--WDPETETCLHTLQGHTNRVYSL 285 (445)
T ss_dssp EEEEETTSEEEEEESSSCCE-EEEEE-CCSSCEEEEEE--CSSCEEEEETTSCEEE--EEGGGTEEEEEECCCSSCEEEE
T ss_pred EEEEeCCCEEEEEECCCCcE-EEEEc-CCcccEEEEEE--CCCEEEEEcCCCEEEE--EECCCCcEeEEecCCCCceEEE
Confidence 46788888888888887753 33333 34456888877 6788888888888888 6666677777777776654433
Q ss_pred eeccceeeeecCCCcceeeee-eeeeeeeeeceE--EEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 81 SVISFTSILAGDAPKYSSFYK-VKRLHLFVKSHV--IVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
..+...+++++.+..+.++.. ..+....+.+|. ..++.+++++|++|+.||.|++||+++++.+.+
T Consensus 286 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 354 (445)
T 2ovr_B 286 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQT 354 (445)
T ss_dssp EECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EECCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 344443444455555554442 122334455553 235666778899999999999999888877654
No 110
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.71 E-value=3.9e-16 Score=122.10 Aligned_cols=137 Identities=15% Similarity=0.194 Sum_probs=95.8
Q ss_pred CeEeecCCeEEEEECCCCccc------eeEecCCCCcceEEEEEcc-CCCEEEEEeeCCeEEEEeecCCCC---cceeEE
Q 032092 1 MVVGTADRNLVVFNLQNPQTE------FKRINSPLKYQMRCVAAFP-DQQGFWVGSIEGRVGVHHLDDSQQ---SKNFTF 70 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~------~~~~~~~~~~~i~~la~sp-dg~~l~~g~~dg~i~i~~~d~~~~---~~~~~~ 70 (147)
|++|+.||.|++||++++... ...+ ..+...|.+++|+| ++..|++++.||.|++ ||.+++ +....+
T Consensus 197 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i--~d~~~~~~~~~~~~~ 273 (430)
T 2xyi_A 197 LLSASDDHTICLWDINATPKEHRVIDAKNIF-TGHTAVVEDVAWHLLHESLFGSVADDQKLMI--WDTRNNNTSKPSHTV 273 (430)
T ss_dssp EEEECTTSCEEEEETTSCCBGGGEEECSEEE-CCCSSCEEEEEECSSCTTEEEEEETTSEEEE--EETTCSCSSSCSEEE
T ss_pred EEEEeCCCeEEEEeCCCCCCCCceeccceee-cCCCCCEeeeEEeCCCCCEEEEEeCCCeEEE--EECCCCCCCcceeEe
Confidence 578999999999999984321 1222 24556799999999 6789999999999999 666654 566677
Q ss_pred EeccCCceE--EeeccceeeeecCCCc-ceeee--eeeeeeeeeece----EEEEEecCC-CeEEEeCCCCcEEEeecCC
Q 032092 71 KCHRDGSET--CSVISFTSILAGDAPK-YSSFY--KVKRLHLFVKSH----VIVLFVQIH-HTFATAGSDGAFNFWDKDS 140 (147)
Q Consensus 71 ~~h~~~~~~--~~v~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~----~~~~fspdg-~~latg~~Dg~i~iWd~~~ 140 (147)
..|.....+ +....-.++++|+.++ +.++. ........+.+| .+++|+|++ .+|++|+.||.|+|||+.+
T Consensus 274 ~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 274 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 777764332 3333323455555554 44433 212334445554 579999999 5799999999999999976
No 111
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.71 E-value=9.8e-17 Score=128.55 Aligned_cols=142 Identities=12% Similarity=0.009 Sum_probs=99.0
Q ss_pred CeEeecCCeEEEEECCCC------c-cceeEecCCCCcceEEEEEccCCCEEEEEeeC----CeEEEEeecCCCCcceeE
Q 032092 1 MVVGTADRNLVVFNLQNP------Q-TEFKRINSPLKYQMRCVAAFPDQQGFWVGSIE----GRVGVHHLDDSQQSKNFT 69 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~------~-~~~~~~~~~~~~~i~~la~spdg~~l~~g~~d----g~i~i~~~d~~~~~~~~~ 69 (147)
|++|+.||.|++||+.++ + +....+. .+..+|.+++|+|++++|++++.+ +.|.+ ||. ++....
T Consensus 81 l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~--~d~--~~~~~~ 155 (615)
T 1pgu_A 81 LCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQ-VLAGPISDISWDFEGRRLCVVGEGRDNFGVFIS--WDS--GNSLGE 155 (615)
T ss_dssp EEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEE-CCSSCEEEEEECTTSSEEEEEECCSSCSEEEEE--TTT--CCEEEE
T ss_pred EEEecCCCEEEEEeCCCCcccccccccccchhh-cccccEEEEEEeCCCCEEEEeccCCCCccEEEE--EEC--CCccee
Confidence 588999999999999754 1 2223333 355689999999999999999987 67877 774 567777
Q ss_pred EEeccCCceE--EeeccceeeeecCCC-cceeeee-eeeeeeeee-------ceEEEEEecC-CCeEEEeCCCCcEEEee
Q 032092 70 FKCHRDGSET--CSVISFTSILAGDAP-KYSSFYK-VKRLHLFVK-------SHVIVLFVQI-HHTFATAGSDGAFNFWD 137 (147)
Q Consensus 70 ~~~h~~~~~~--~~v~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~-------~~~~~~fspd-g~~latg~~Dg~i~iWd 137 (147)
+.+|...... +....-.++++++.+ .++++.. ..+....+. ....++|+|+ +++|++|+.||.|++||
T Consensus 156 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd 235 (615)
T 1pgu_A 156 VSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFD 235 (615)
T ss_dssp CCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEE
T ss_pred eecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence 7788765332 323332244444444 4554441 112233333 3457899999 99999999999999999
Q ss_pred cCCceeeecC
Q 032092 138 KDSKQRLKVF 147 (147)
Q Consensus 138 ~~~~~~~~~~ 147 (147)
+++++.+.++
T Consensus 236 ~~~~~~~~~~ 245 (615)
T 1pgu_A 236 GKSGEFLKYI 245 (615)
T ss_dssp TTTCCEEEEC
T ss_pred CCCCCEeEEe
Confidence 9998887653
No 112
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.71 E-value=3.8e-16 Score=118.98 Aligned_cols=139 Identities=16% Similarity=0.145 Sum_probs=97.9
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccC---CCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCc
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPD---QQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGS 77 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spd---g~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~ 77 (147)
|++|+.||.|++||+++++. ...+. +..++.+++++|. +.++++|+.||.|++ ||.++++....+.+|....
T Consensus 115 l~s~~~d~~i~iwd~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~d~~~~~~~~~~~~~~~~v 189 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTLQT-ADVFN--FEETVYSHHMSPVSTKHCLVAVGTRGPKVQL--CDLKSGSCSHILQGHRQEI 189 (408)
T ss_dssp EEEEETTSEEEEEETTTTEE-EEEEE--CSSCEEEEEECSSCSSCCEEEEEESSSSEEE--EESSSSCCCEEECCCCSCE
T ss_pred EEEEeCCCeEEEeeCCCCcc-ceecc--CCCceeeeEeecCCCCCcEEEEEcCCCeEEE--EeCCCcceeeeecCCCCcE
Confidence 57889999999999999853 33343 3356899999985 459999999999999 7777788888888887653
Q ss_pred eE--EeeccceeeeecCCC-cceeeee--eeeeeeee---------------ece----EEEEEecCCCeEEEeCCCCcE
Q 032092 78 ET--CSVISFTSILAGDAP-KYSSFYK--VKRLHLFV---------------KSH----VIVLFVQIHHTFATAGSDGAF 133 (147)
Q Consensus 78 ~~--~~v~~~~~~~~~~~~-~~~~~~~--~~~~~~~~---------------~~~----~~~~fspdg~~latg~~Dg~i 133 (147)
.+ +....-.++++|+.+ .+.++.. .......+ .+| ..++|+|++++|++|+.||.|
T Consensus 190 ~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 269 (408)
T 4a11_B 190 LAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRM 269 (408)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeE
Confidence 32 333333235444444 4444331 11111111 233 578999999999999999999
Q ss_pred EEeecCCceee
Q 032092 134 NFWDKDSKQRL 144 (147)
Q Consensus 134 ~iWd~~~~~~~ 144 (147)
++||+++++.+
T Consensus 270 ~vwd~~~~~~~ 280 (408)
T 4a11_B 270 RLWNSSNGENT 280 (408)
T ss_dssp EEEETTTCCBC
T ss_pred EEEECCCCccc
Confidence 99999987654
No 113
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.70 E-value=3.7e-16 Score=122.03 Aligned_cols=136 Identities=15% Similarity=0.182 Sum_probs=97.4
Q ss_pred CeEeecCCeEEEEECCCCccce-eEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEF-KRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSET 79 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~-~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~ 79 (147)
|++|+.||.|++||+++++... ......+..+|.++++ +++++++|+.||+|++ ||.++++.+.++.+|.....+
T Consensus 226 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~v--wd~~~~~~~~~~~~~~~~v~~ 301 (435)
T 1p22_A 226 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKV--WNTSTCEFVRTLNGHKRGIAC 301 (435)
T ss_dssp EEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEE--EETTTCCEEEEEECCSSCEEE
T ss_pred EEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEE--EECCcCcEEEEEcCCCCcEEE
Confidence 5789999999999999875321 1222345667999988 6899999999999999 788888888899988875444
Q ss_pred EeeccceeeeecCCCcceeeeee-eeeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCce
Q 032092 80 CSVISFTSILAGDAPKYSSFYKV-KRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQ 142 (147)
Q Consensus 80 ~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~ 142 (147)
.....-.+++++.|..++++..- .+....+.+| ..++| ++++|++|+.||.|++||+++++
T Consensus 302 ~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 302 LQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHT
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCC
Confidence 44444434444555555554421 2334455666 34555 88999999999999999987654
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.70 E-value=8.7e-17 Score=130.94 Aligned_cols=103 Identities=15% Similarity=0.193 Sum_probs=76.2
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCC----CcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcc-------eeE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPL----KYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSK-------NFT 69 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~----~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~-------~~~ 69 (147)
||+++.||.|+|||.+. ....+. ++ ...+.+++|||||++||+|+.||+|+| ||..++.. +.+
T Consensus 100 LAs~s~dg~V~iwd~~~---~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkI--Wd~~~~~l~~~~~i~l~t 173 (588)
T 2j04_A 100 MAVLSNNGNVSVFKDNK---MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQF--FSIRKNSENTPEFYFESS 173 (588)
T ss_dssp EEEEETTSCEEEEETTE---EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEE--EECCCCTTTCCCCEEEEE
T ss_pred EEEEeCCCcEEEEeCCc---eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEE--EECCCCccccccceeeee
Confidence 68999999999999544 233333 22 125999999999999999999999999 66665542 456
Q ss_pred EEeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCce
Q 032092 70 FKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQ 142 (147)
Q Consensus 70 ~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~ 142 (147)
++.|... +...|.++ +|+||| +++++.|++|++||+++++
T Consensus 174 i~~~~~g-h~~~V~sV------------------------------awSPdg--Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 174 IRLSDAG-SKDWVTHI------------------------------VWYEDV--LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp EECSCTT-CCCCEEEE------------------------------EEETTE--EEEEETTCCEEEECCCSSS
T ss_pred eeccccc-ccccEEEE------------------------------EEcCCc--EEEEeCCCeEEEEECCCCc
Confidence 6433321 11135555 999999 8888999999999998776
No 115
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.69 E-value=1e-16 Score=124.38 Aligned_cols=125 Identities=13% Similarity=0.119 Sum_probs=73.4
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCC-EEEEEeeCCeEEEEeecCCCCcceeEEEeccCCce-
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQ-GFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE- 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~-~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~- 78 (147)
||+|+.|++|+|||++++..... .. .+..++.+++|+|++. +|++|+.||+|++ ||.++++...+...+.....
T Consensus 159 las~s~D~tv~~Wd~~~~~~~~~-~~-~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~--wd~~t~~~~~~~~~~~~~~~~ 234 (393)
T 4gq1_A 159 IASVGDDCTLIIWRLTDEGPILA-GY-PLSSPGISVQFRPSNPNQLIVGERNGNIRI--FDWTLNLSAEENSQTELVKNP 234 (393)
T ss_dssp EEEEETTSEEEEEEEETTEEEEE-EE-ECSSCEEEEEEETTEEEEEEEEETTSEEEE--EETTCCC----------CSCC
T ss_pred EEEEECCCeEEEEECCCCceeee-ec-CCCCCcEEEEECCCCCceEEecCCCCEEEE--EECCCCcccccccccCCcccc
Confidence 68999999999999988754322 22 3446799999999874 7999999999999 77776665544433322110
Q ss_pred -EEeeccceeeeecCCCcceeeeeeeeeeeeeece----EEEEEe-cCCCeEEEeCCCCcEEEeecCCceeee
Q 032092 79 -TCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSH----VIVLFV-QIHHTFATAGSDGAFNFWDKDSKQRLK 145 (147)
Q Consensus 79 -~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~fs-pdg~~latg~~Dg~i~iWd~~~~~~~~ 145 (147)
....... . +. ......+| ..++|+ |||+.|++++.|+++++||+.+++...
T Consensus 235 ~~~s~~~~--------~-------~~-~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~ 291 (393)
T 4gq1_A 235 WLLTLNTL--------P-------LV-NTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYN 291 (393)
T ss_dssp CSEEEESG--------G-------GC-------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------
T ss_pred eEEecccc--------c-------ce-eeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCc
Confidence 0000000 0 00 00001111 245776 799999999999999999998766543
No 116
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.69 E-value=3.3e-16 Score=130.80 Aligned_cols=138 Identities=12% Similarity=0.159 Sum_probs=95.0
Q ss_pred CeEeecCCeEEEEECCCCcc-ceeEecCCCCcceEEEEEccC--CCEEEEEeeCCeEEEEeecCCCCc--ceeEEEeccC
Q 032092 1 MVVGTADRNLVVFNLQNPQT-EFKRINSPLKYQMRCVAAFPD--QQGFWVGSIEGRVGVHHLDDSQQS--KNFTFKCHRD 75 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~-~~~~~~~~~~~~i~~la~spd--g~~l~~g~~dg~i~i~~~d~~~~~--~~~~~~~h~~ 75 (147)
|++|+.||.|+|||+..+.. ....+ ..|..+|++++|+|+ +++|++|+.||+|++| |..+++ ....+.+|..
T Consensus 24 latg~~dg~I~vwd~~~~~~~~~~~l-~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw--d~~~~~~~~~~~~~~h~~ 100 (753)
T 3jro_A 24 LATCSSDKTIKIFEVEGETHKLIDTL-TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW--KEENGRWSQIAVHAVHSA 100 (753)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE--EEETTEEEEEEEECCCSS
T ss_pred EEEEECCCcEEEEecCCCCCccceec-cCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE--ECCCCcccccccccCCCC
Confidence 58899999999999985432 22333 346678999999998 9999999999999995 544444 5566677766
Q ss_pred Cce--EEeec--cceeeeecCCCcceeeeeee---eeeeeeece----EEEEEec-------------CCCeEEEeCCCC
Q 032092 76 GSE--TCSVI--SFTSILAGDAPKYSSFYKVK---RLHLFVKSH----VIVLFVQ-------------IHHTFATAGSDG 131 (147)
Q Consensus 76 ~~~--~~~v~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~fsp-------------dg~~latg~~Dg 131 (147)
... .+... ...+++++.+..+.++..-. .....+.+| ..++|+| ++++|++|+.||
T Consensus 101 ~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg 180 (753)
T 3jro_A 101 SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 180 (753)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTS
T ss_pred CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCC
Confidence 533 23333 32334445444454444211 112233444 5789999 589999999999
Q ss_pred cEEEeecCCc
Q 032092 132 AFNFWDKDSK 141 (147)
Q Consensus 132 ~i~iWd~~~~ 141 (147)
.|++||++++
T Consensus 181 ~I~iwd~~~~ 190 (753)
T 3jro_A 181 LVKIWKYNSD 190 (753)
T ss_dssp CEEEEEEETT
T ss_pred eEEEEeccCC
Confidence 9999999776
No 117
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.69 E-value=3.8e-17 Score=129.07 Aligned_cols=100 Identities=13% Similarity=0.044 Sum_probs=77.2
Q ss_pred EeecCCeEEEEECCCC-----c--cceeEe--cCCCCcceEEEEEccC-CCEEEEEeeCCeEEEEeecCCCCcceeEEEe
Q 032092 3 VGTADRNLVVFNLQNP-----Q--TEFKRI--NSPLKYQMRCVAAFPD-QQGFWVGSIEGRVGVHHLDDSQQSKNFTFKC 72 (147)
Q Consensus 3 ~gs~dg~v~iwdi~~~-----~--~~~~~~--~~~~~~~i~~la~spd-g~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~ 72 (147)
+|+.|+.|+|||++++ + +++..+ ...|..+|++|+|+|+ ++.|++++.||+|++ ||.+++.......+
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~i--wD~~~~~~~~~~~~ 190 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAV--LQVTETVKVCATLP 190 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEE--EEESSSEEEEEEEC
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEE--EEcCCCcceeeccC
Confidence 6788999999999764 1 122112 1235567999999998 889999999999999 66666655445555
Q ss_pred ccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecC
Q 032092 73 HRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKD 139 (147)
Q Consensus 73 h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~ 139 (147)
|.. .+.++ +|+|+|++||+|+.||+|++||.+
T Consensus 191 ~~~-----~v~~v------------------------------~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 191 STV-----AVTSV------------------------------CWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp GGG-----CEEEE------------------------------EECTTSSCEEEEETTSCEEEECTT
T ss_pred CCC-----ceeEE------------------------------EEcCCCCEEEEEcCCCcEEEEccC
Confidence 553 35555 999999999999999999999997
No 118
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.68 E-value=1.7e-15 Score=116.95 Aligned_cols=137 Identities=9% Similarity=-0.032 Sum_probs=88.1
Q ss_pred cCCeEEEEECCC-CccceeEecCCCCcceEEEEEcc---CCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCC---c-
Q 032092 6 ADRNLVVFNLQN-PQTEFKRINSPLKYQMRCVAAFP---DQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDG---S- 77 (147)
Q Consensus 6 ~dg~v~iwdi~~-~~~~~~~~~~~~~~~i~~la~sp---dg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~---~- 77 (147)
.|+.|++|++.. ++ ...... .+...++.++|+| +++.||+|+.|++|+| ||+++++.+.++.+|... .
T Consensus 155 ~d~~V~~~~~s~dG~-~~~s~~-~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkI--WDl~TGk~l~tL~g~~~~v~~v~ 230 (356)
T 2w18_A 155 SDQQVEVMTFAEDGG-GKENQF-LMPPEETILTFAEVQGMQEALLGTTIMNNIVI--WNLKTGQLLKKMHIDDSYQASVC 230 (356)
T ss_dssp TTCEEEEEEECTTSC-EEEEEE-ECCCSSCEEEEEEEETSTTEEEEEETTSEEEE--EETTTCCEEEEEECCC---CCCE
T ss_pred CCCcEEEEEECCCCc-eeeeec-cCCCceeeEEeeccCCCCceEEEecCCCcEEE--EECCCCcEEEEEcCCCcceeeeE
Confidence 499999999955 53 222222 2334588999999 7799999999999999 888889999999865431 1
Q ss_pred -eEEeecccee-----------eeecCCCc-ceeeeeee--eeeeee-----eceE--EEEEecCCCeEEEeCCCCcEEE
Q 032092 78 -ETCSVISFTS-----------ILAGDAPK-YSSFYKVK--RLHLFV-----KSHV--IVLFVQIHHTFATAGSDGAFNF 135 (147)
Q Consensus 78 -~~~~v~~~~~-----------~~~~~~~~-~~~~~~~~--~~~~~~-----~~~~--~~~fspdg~~latg~~Dg~i~i 135 (147)
.++..+...+ +++|+.+. ++.+ +.. +....+ .||. .+..+.++.++|+|+.|++|+|
T Consensus 231 ~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklW-d~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkI 309 (356)
T 2w18_A 231 HKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVI-NPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAI 309 (356)
T ss_dssp EEEEEETTEEEEEEC------------CCEEEEEE-ETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEE
T ss_pred EEEECCCCCEEEEeccCCCcceeeccCCCcEEEEE-ECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEE
Confidence 1244444322 24455553 4443 322 111111 2452 2344445778999999999999
Q ss_pred eecCCceeeecC
Q 032092 136 WDKDSKQRLKVF 147 (147)
Q Consensus 136 Wd~~~~~~~~~~ 147 (147)
||++++++++++
T Consensus 310 WDl~tGk~l~tL 321 (356)
T 2w18_A 310 WDLLLGQCTALL 321 (356)
T ss_dssp EETTTCSEEEEE
T ss_pred EECCCCcEEEEe
Confidence 999999988764
No 119
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.67 E-value=3.7e-16 Score=117.01 Aligned_cols=133 Identities=14% Similarity=0.143 Sum_probs=90.8
Q ss_pred CeEeecCCeEEEEEC-CCCccceeEecCC--CCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCC---------Cccee
Q 032092 1 MVVGTADRNLVVFNL-QNPQTEFKRINSP--LKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQ---------QSKNF 68 (147)
Q Consensus 1 l~~gs~dg~v~iwdi-~~~~~~~~~~~~~--~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~---------~~~~~ 68 (147)
|++|+.||.|++||+ .+++. ..+. . +..+|.+++|+| ++.|++++.||.|++ ||.++ ++...
T Consensus 72 l~~~~~dg~i~~wd~~~~~~~--~~~~-~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~i--wd~~~~~~~~~~~~~~~~~ 145 (342)
T 1yfq_A 72 IYVGTVQGEILKVDLIGSPSF--QALT-NNEANLGICRICKYG-DDKLIAASWDGLIEV--IDPRNYGDGVIAVKNLNSN 145 (342)
T ss_dssp EEEEETTSCEEEECSSSSSSE--EECB-SCCCCSCEEEEEEET-TTEEEEEETTSEEEE--ECHHHHTTBCEEEEESCSS
T ss_pred EEEEcCCCeEEEEEeccCCce--Eecc-ccCCCCceEEEEeCC-CCEEEEEcCCCeEEE--EcccccccccccccCCeee
Confidence 578999999999999 87642 3333 3 567899999999 999999999999999 56554 44444
Q ss_pred EEEeccCCceEEeeccceeeeecCCCcceeeeeeee-----eeeeee----ceEEEEEec-CCCeEEEeCCCCcEEEeec
Q 032092 69 TFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKR-----LHLFVK----SHVIVLFVQ-IHHTFATAGSDGAFNFWDK 138 (147)
Q Consensus 69 ~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~----~~~~~~fsp-dg~~latg~~Dg~i~iWd~ 138 (147)
++. |.............+++++.+..+.++. +.. ...... ....++|+| ++++|++|+.||.|++||+
T Consensus 146 ~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~d-~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~ 223 (342)
T 1yfq_A 146 NTK-VKNKIFTMDTNSSRLIVGMNNSQVQWFR-LPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFF 223 (342)
T ss_dssp SSS-SCCCEEEEEECSSEEEEEESTTEEEEEE-SSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEEC
T ss_pred EEe-eCCceEEEEecCCcEEEEeCCCeEEEEE-CCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEE
Confidence 443 4433222333333344444444444443 222 111222 235789999 9999999999999999999
Q ss_pred CCc
Q 032092 139 DSK 141 (147)
Q Consensus 139 ~~~ 141 (147)
+.+
T Consensus 224 ~~~ 226 (342)
T 1yfq_A 224 DDQ 226 (342)
T ss_dssp CTT
T ss_pred cCC
Confidence 776
No 120
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.67 E-value=7.8e-16 Score=133.20 Aligned_cols=140 Identities=16% Similarity=0.146 Sum_probs=102.7
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCc--e
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGS--E 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~--~ 78 (147)
|++|+.||.|++||+.+++.. . . ..+...+.+++|+|++ .+++++.||+|++ ||..+++...++.+|.... .
T Consensus 1018 l~s~~~dg~i~vwd~~~~~~~-~-~-~~~~~~v~~~~~~~~~-~l~~~~~dg~v~v--wd~~~~~~~~~~~~~~~~v~~~ 1091 (1249)
T 3sfz_A 1018 LISSSEDSVIQVWNWQTGDYV-F-L-QAHQETVKDFRLLQDS-RLLSWSFDGTVKV--WNVITGRIERDFTCHQGTVLSC 1091 (1249)
T ss_dssp EEEECSSSBEEEEETTTTEEE-C-C-BCCSSCEEEEEECSSS-EEEEEESSSEEEE--EETTTTCCCEEEECCSSCCCCE
T ss_pred EEEEcCCCEEEEEECCCCceE-E-E-ecCCCcEEEEEEcCCC-cEEEEECCCcEEE--EECCCCceeEEEcccCCcEEEE
Confidence 578999999999999998532 1 2 2455679999999966 6789999999999 7888888888999887643 2
Q ss_pred EEeeccceeeeecCCCcceeeee-eeeeeeeeece----EEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 79 TCSVISFTSILAGDAPKYSSFYK-VKRLHLFVKSH----VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.+..+...+++++.|..+.+|.. ..+....+.+| ..++|+|||++||+|+.||.|++||+.+++.+.+
T Consensus 1092 ~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~ 1164 (1249)
T 3sfz_A 1092 AISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHS 1164 (1249)
T ss_dssp EECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCC
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEE
Confidence 34334433444455545554441 11223344454 5789999999999999999999999999887654
No 121
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.67 E-value=1.5e-15 Score=116.26 Aligned_cols=136 Identities=13% Similarity=0.099 Sum_probs=89.3
Q ss_pred eEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCC-cceeEEEeccCCceEE
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQ-SKNFTFKCHRDGSETC 80 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~-~~~~~~~~h~~~~~~~ 80 (147)
++|+.|++|+|||+++++. ...+. +..+|.+++++|+. ++++ .|++|++ ||..++ +.+.++.. .....++
T Consensus 75 ~~~~~d~~v~iWd~~~~~~-~~~~~--~~~~v~~v~~~~~~--~~~~-~~~~i~i--~d~~~~~~~~~~~~~-~~~~~~~ 145 (355)
T 3vu4_A 75 FVTGVKEVVHIWDDVKKQD-VSRIK--VDAPVKDLFLSREF--IVVS-YGDVISV--FKFGNPWKRITDDIR-FGGVCEF 145 (355)
T ss_dssp EECSSTTEEEEEETTTTEE-EEEEE--CSSCEEEEEECSSE--EEEE-ETTEEEE--EESSTTCCBSSCCEE-EEEEEEE
T ss_pred EEECCccEEEEEECCCCcE-EEEEE--CCCceEEEEEcCCE--EEEE-EcCEEEE--EECCCCceeeEEecc-CCceEEE
Confidence 4678899999999999864 44444 33479999998764 4443 5899999 666655 45444443 1111122
Q ss_pred eeccceeeeecCCCcceeeeeeee------------------eeeeeece----EEEEEecCCCeEEEeCCCCc-EEEee
Q 032092 81 SVISFTSILAGDAPKYSSFYKVKR------------------LHLFVKSH----VIVLFVQIHHTFATAGSDGA-FNFWD 137 (147)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~----~~~~fspdg~~latg~~Dg~-i~iWd 137 (147)
.. ....+.+|+.++....+++.. ....+.+| ..++|+|+|++||||+.||+ |+|||
T Consensus 146 s~-~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd 224 (355)
T 3vu4_A 146 SN-GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFK 224 (355)
T ss_dssp ET-TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEE
T ss_pred Ec-cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 22 221223256664333333321 13556676 47999999999999999998 99999
Q ss_pred cCCceeeecC
Q 032092 138 KDSKQRLKVF 147 (147)
Q Consensus 138 ~~~~~~~~~~ 147 (147)
+++++++++|
T Consensus 225 ~~~~~~~~~~ 234 (355)
T 3vu4_A 225 TEDGVLVREF 234 (355)
T ss_dssp TTTCCEEEEE
T ss_pred CCCCcEEEEE
Confidence 9999887754
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.66 E-value=6.4e-15 Score=112.57 Aligned_cols=141 Identities=11% Similarity=0.064 Sum_probs=97.1
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEE-EEEeeCCeEEEEeecCCCCcceeEEEeccCC-ce
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGF-WVGSIEGRVGVHHLDDSQQSKNFTFKCHRDG-SE 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l-~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~-~~ 78 (147)
+++++.|+.|++||+.+++. ...+.. + ..+.+++|+|+|+.+ ++++.|++|++ ||..+++....+..+..- ..
T Consensus 5 ~vs~~~d~~v~v~d~~~~~~-~~~~~~-~-~~~~~~~~s~dg~~l~~~~~~d~~i~v--~d~~~~~~~~~~~~~~~v~~~ 79 (391)
T 1l0q_A 5 YIANSESDNISVIDVTSNKV-TATIPV-G-SNPMGAVISPDGTKVYVANAHSNDVSI--IDTATNNVIATVPAGSSPQGV 79 (391)
T ss_dssp EEEETTTTEEEEEETTTTEE-EEEEEC-S-SSEEEEEECTTSSEEEEEEGGGTEEEE--EETTTTEEEEEEECSSSEEEE
T ss_pred EEEcCCCCEEEEEECCCCeE-EEEeec-C-CCcceEEECCCCCEEEEECCCCCeEEE--EECCCCeEEEEEECCCCccce
Confidence 47889999999999999853 344432 2 358999999999976 67779999999 787778777777655421 12
Q ss_pred EEeeccceeeeecCCC-cceeeeee-eeeeeeeec---eEEEEEecCCCeE-EEeCCCCcEEEeecCCceeeec
Q 032092 79 TCSVISFTSILAGDAP-KYSSFYKV-KRLHLFVKS---HVIVLFVQIHHTF-ATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~---~~~~~fspdg~~l-atg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.+..+.-.++++++++ .+.++... .+....+.. ...++|+|+|+.| ++++.|+.|++||+++++.+..
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT 153 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 3333333344555554 44444311 122223322 3578999999876 7888899999999999887654
No 123
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.63 E-value=5.2e-15 Score=116.08 Aligned_cols=127 Identities=6% Similarity=-0.055 Sum_probs=83.0
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETC 80 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~ 80 (147)
|++|+.|++|++||+++++. ...+...+..+|.+++|+ ++++|++|+.||+|++ ||.++++.+..+..+..
T Consensus 213 l~s~~~d~~i~vwd~~~~~~-~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~v--wd~~~~~~~~~~~~~~~----- 283 (450)
T 2vdu_B 213 IITSDRDEHIKISHYPQCFI-VDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFA--WDWKTGKNLSTFDYNSL----- 283 (450)
T ss_dssp EEEEETTSCEEEEEESCTTC-EEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEE--EETTTCCEEEEEECHHH-----
T ss_pred EEEEcCCCcEEEEECCCCce-eeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEE--EECCCCcEeeeecchhh-----
Confidence 57899999999999998864 344333566789999999 9999999999999999 77777887777764421
Q ss_pred eeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeC-CCCcEEEeec--CCc
Q 032092 81 SVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAG-SDGAFNFWDK--DSK 141 (147)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~-~Dg~i~iWd~--~~~ 141 (147)
+..+.. .... .... +. .......-.....++|+|++++|++++ .|+.|+|||+ .++
T Consensus 284 -~~~~~~-~~~~-~~~~-~~-~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~ 342 (450)
T 2vdu_B 284 -IKPYLN-DQHL-APPR-FQ-NENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQK 342 (450)
T ss_dssp -HGGGCC-TTSB-C------------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSST
T ss_pred -hhhhhh-hccc-cccc-cc-ccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCC
Confidence 000000 0000 0000 00 000000001123459999999999988 8999999999 554
No 124
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.62 E-value=8.4e-15 Score=119.32 Aligned_cols=131 Identities=12% Similarity=0.044 Sum_probs=90.5
Q ss_pred CeEeecCCeEEEEECCCCcc------ceeEec---CCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcc---ee
Q 032092 1 MVVGTADRNLVVFNLQNPQT------EFKRIN---SPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSK---NF 68 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~------~~~~~~---~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~---~~ 68 (147)
||+|+.||+|+|||++++.. .++++. .+|...|.+++|+||| +++++.|++|++ ||...++. ..
T Consensus 144 LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrl--Wd~~~~~~~~~~~ 219 (588)
T 2j04_A 144 IVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFS--MTVSASSHQPVSR 219 (588)
T ss_dssp EEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEE--ECCCSSSSCCCEE
T ss_pred EEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEE--EECCCCcccccee
Confidence 68999999999999998742 134442 2355689999999999 889999999999 55554442 34
Q ss_pred EEE-eccCCc--eEEeeccceeeeecCCCcceeeeeeeeeeeeee-ce----EEEEE--ecCCCeEEEeCCCCcEEEeec
Q 032092 69 TFK-CHRDGS--ETCSVISFTSILAGDAPKYSSFYKVKRLHLFVK-SH----VIVLF--VQIHHTFATAGSDGAFNFWDK 138 (147)
Q Consensus 69 ~~~-~h~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~f--spdg~~latg~~Dg~i~iWd~ 138 (147)
+++ +|+... ..+. . ..++++++..++.|.........+. +| ..++| +||++.|++++.||+ ++|..
T Consensus 220 tL~~~h~~~V~svaFs--g-~~LASa~~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 220 MIQNASRRKITDLKIV--D-YKVVLTCPGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp EEECCCSSCCCCEEEE--T-TEEEEECSSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEES
T ss_pred eecccccCcEEEEEEE--C-CEEEEEeCCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEee
Confidence 564 676432 3343 2 3455545555555553323232332 66 36899 999999999999999 99997
Q ss_pred C
Q 032092 139 D 139 (147)
Q Consensus 139 ~ 139 (147)
+
T Consensus 296 d 296 (588)
T 2j04_A 296 D 296 (588)
T ss_dssp S
T ss_pred c
Confidence 5
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.59 E-value=1.3e-13 Score=105.35 Aligned_cols=140 Identities=11% Similarity=0.075 Sum_probs=93.3
Q ss_pred eEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEE-EEeeCCeEEEEeecCCCCcceeEEEeccCC-ceE
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFW-VGSIEGRVGVHHLDDSQQSKNFTFKCHRDG-SET 79 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~-~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~-~~~ 79 (147)
++++.|+.|++||+.+++. ...+..+ ..+.+++|+|++++++ +++.++.|++ ||..+++....+..|... ...
T Consensus 48 ~~~~~d~~i~v~d~~~~~~-~~~~~~~--~~v~~~~~spdg~~l~~~~~~~~~v~v--~d~~~~~~~~~~~~~~~~~~~~ 122 (391)
T 1l0q_A 48 VANAHSNDVSIIDTATNNV-IATVPAG--SSPQGVAVSPDGKQVYVTNMASSTLSV--IDTTSNTVAGTVKTGKSPLGLA 122 (391)
T ss_dssp EEEGGGTEEEEEETTTTEE-EEEEECS--SSEEEEEECTTSSEEEEEETTTTEEEE--EETTTTEEEEEEECSSSEEEEE
T ss_pred EECCCCCeEEEEECCCCeE-EEEEECC--CCccceEECCCCCEEEEEECCCCEEEE--EECCCCeEEEEEeCCCCcceEE
Confidence 5677899999999998864 3444322 3799999999999875 5556799999 788777777777655431 123
Q ss_pred EeeccceeeeecCCC-cceeeeee-eeeeeeee---ceEEEEEecCCCeE-EEeCCCCcEEEeecCCceeeec
Q 032092 80 CSVISFTSILAGDAP-KYSSFYKV-KRLHLFVK---SHVIVLFVQIHHTF-ATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 80 ~~v~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~---~~~~~~fspdg~~l-atg~~Dg~i~iWd~~~~~~~~~ 146 (147)
+..+.-.++.+++++ .+..+... .+....+. ....++|+|+|+.| ++++.|+.|++||+++++.+..
T Consensus 123 ~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 123 LSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDT 195 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 333333343444444 44444311 12222232 23578999999876 7888899999999998877653
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.53 E-value=6.4e-14 Score=108.34 Aligned_cols=107 Identities=11% Similarity=0.055 Sum_probs=83.3
Q ss_pred eEeecCCeEEEEECCCCccceeEec----CCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCc
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRIN----SPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGS 77 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~----~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~ 77 (147)
++++.|+.|++||+.+++. ..... ..+...+.+++|+|+++.+++++.|+.|++ ||.++++...++..|..
T Consensus 138 ~~~~~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~--~d~~~~~~~~~~~~~~~-- 212 (433)
T 3bws_A 138 IPLLEDEGMDVLDINSGQT-VRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHV--FDLKTLAYKATVDLTGK-- 212 (433)
T ss_dssp EEBTTSSSEEEEETTTCCE-EEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEE--EETTTCCEEEEEECSSS--
T ss_pred EEeCCCCeEEEEECCCCeE-eeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEE--EECCCceEEEEEcCCCC--
Confidence 5667788999999998864 23211 134457999999999999999999999999 77777777777776654
Q ss_pred eEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeE-EEeCCCCcEEEeecCCceeeec
Q 032092 78 ETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTF-ATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 78 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~l-atg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.+..+ +|+|+++.+ ++++.|+.|++||+++++.+.+
T Consensus 213 ---~~~~~------------------------------~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~ 249 (433)
T 3bws_A 213 ---WSKIL------------------------------LYDPIRDLVYCSNWISEDISVIDRKTKLEIRK 249 (433)
T ss_dssp ---SEEEE------------------------------EEETTTTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ---CeeEE------------------------------EEcCCCCEEEEEecCCCcEEEEECCCCcEEEE
Confidence 24455 999999876 5666899999999999887764
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.53 E-value=5.9e-13 Score=102.90 Aligned_cols=142 Identities=11% Similarity=-0.018 Sum_probs=90.5
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEE-EEeeCCeEEEEeecCCCCcceeEEEeccCC-ce
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFW-VGSIEGRVGVHHLDDSQQSKNFTFKCHRDG-SE 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~-~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~-~~ 78 (147)
+++++.|+.|++||+++++. ...+. .+...+.+++|+|+++.++ +++.|+.|++ ||+++++....+..+... ..
T Consensus 184 ~~s~~~d~~v~~~d~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~--~d~~~~~~~~~~~~~~~~~~~ 259 (433)
T 3bws_A 184 WVSQMQANAVHVFDLKTLAY-KATVD-LTGKWSKILLYDPIRDLVYCSNWISEDISV--IDRKTKLEIRKTDKIGLPRGL 259 (433)
T ss_dssp EEEEGGGTEEEEEETTTCCE-EEEEE-CSSSSEEEEEEETTTTEEEEEETTTTEEEE--EETTTTEEEEECCCCSEEEEE
T ss_pred EEEECCCCEEEEEECCCceE-EEEEc-CCCCCeeEEEEcCCCCEEEEEecCCCcEEE--EECCCCcEEEEecCCCCceEE
Confidence 47888999999999998753 34443 3445689999999999875 5558999999 777777666555443211 11
Q ss_pred EEeeccceeeeecC--------CCcceeeeeee-eeee---eeeceEEEEEecCCC-eEEEeCCCCcEEEeecCCceeee
Q 032092 79 TCSVISFTSILAGD--------APKYSSFYKVK-RLHL---FVKSHVIVLFVQIHH-TFATAGSDGAFNFWDKDSKQRLK 145 (147)
Q Consensus 79 ~~~v~~~~~~~~~~--------~~~~~~~~~~~-~~~~---~~~~~~~~~fspdg~-~latg~~Dg~i~iWd~~~~~~~~ 145 (147)
.+....-.+++++. +..+..+..-. +... +......++|+|+++ ++++++.|+.|++||+++++.+.
T Consensus 260 ~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~ 339 (433)
T 3bws_A 260 LLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQK 339 (433)
T ss_dssp EECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEE
Confidence 22223322333332 22333333111 1111 122345789999996 56777999999999999887765
Q ss_pred c
Q 032092 146 V 146 (147)
Q Consensus 146 ~ 146 (147)
.
T Consensus 340 ~ 340 (433)
T 3bws_A 340 S 340 (433)
T ss_dssp E
T ss_pred E
Confidence 4
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.46 E-value=7e-13 Score=107.44 Aligned_cols=105 Identities=10% Similarity=0.061 Sum_probs=82.7
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecC--CCCcceeEEEeccCCce
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDD--SQQSKNFTFKCHRDGSE 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~--~~~~~~~~~~~h~~~~~ 78 (147)
+++++.|++|.+||..+++. ..++..++ .+..++|+|||+++++++.|++|.+ ||+ .+++.+.++..+.
T Consensus 152 ~vs~~~d~~V~v~D~~t~~~-~~~i~~g~--~~~~v~~spdg~~l~v~~~d~~V~v--~D~~~~t~~~~~~i~~g~---- 222 (543)
T 1nir_A 152 SVTLRDAGQIALVDGDSKKI-VKVIDTGY--AVHISRMSASGRYLLVIGRDARIDM--IDLWAKEPTKVAEIKIGI---- 222 (543)
T ss_dssp EEEEGGGTEEEEEETTTCCE-EEEEECST--TEEEEEECTTSCEEEEEETTSEEEE--EETTSSSCEEEEEEECCS----
T ss_pred EEEEcCCCeEEEEECCCceE-EEEEecCc--ccceEEECCCCCEEEEECCCCeEEE--EECcCCCCcEEEEEecCC----
Confidence 46778899999999999863 45554333 3789999999999999999999999 565 6666666665322
Q ss_pred EEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEec----CCCeEEEeCC-CCcEEEeecCCceeeec
Q 032092 79 TCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQ----IHHTFATAGS-DGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fsp----dg~~latg~~-Dg~i~iWd~~~~~~~~~ 146 (147)
.+..+ +|+| ||++|++++. |++|.+||..+++++++
T Consensus 223 --~p~~v------------------------------a~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~ 263 (543)
T 1nir_A 223 --EARSV------------------------------ESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQI 263 (543)
T ss_dssp --EEEEE------------------------------EECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEE
T ss_pred --CcceE------------------------------EeCCCcCCCCCEEEEEEccCCeEEEEecccccccee
Confidence 23444 9999 9999999885 89999999999887764
No 129
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.44 E-value=8.9e-13 Score=104.01 Aligned_cols=106 Identities=17% Similarity=0.149 Sum_probs=75.1
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCC--ce
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDG--SE 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~--~~ 78 (147)
|++|+.||+|++||+++++... ... .+...|++++|+|+|++|++|+.||+|++ ||.+ ++...++..|... .+
T Consensus 165 las~s~Dg~v~iwD~~~~~~~~-~~~-~~~~~v~~v~wspdg~~lasgs~dg~v~i--wd~~-~~~~~~~~~~~~~~~~~ 239 (434)
T 2oit_A 165 VAVCLADGSIAVLQVTETVKVC-ATL-PSTVAVTSVCWSPKGKQLAVGKQNGTVVQ--YLPT-LQEKKVIPCPPFYESDH 239 (434)
T ss_dssp EEEEETTSCEEEEEESSSEEEE-EEE-CGGGCEEEEEECTTSSCEEEEETTSCEEE--ECTT-CCEEEEECCCTTCCTTS
T ss_pred EEEEECCCeEEEEEcCCCccee-ecc-CCCCceeEEEEcCCCCEEEEEcCCCcEEE--EccC-CcccccccCCcccCCCC
Confidence 5789999999999999875322 222 34567999999999999999999999999 7776 5555555554321 01
Q ss_pred EEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEE-eCCCCc------EEEeecCCc
Q 032092 79 TCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFAT-AGSDGA------FNFWDKDSK 141 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~lat-g~~Dg~------i~iWd~~~~ 141 (147)
...+.++ +|+|++.++++ +..||. +++||+.+.
T Consensus 240 ~~~v~~v------------------------------~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 240 PVRVLDV------------------------------LWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CEEEEEE------------------------------EEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ceeEEEE------------------------------EEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 1123333 99999877644 334443 899999764
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.43 E-value=3.2e-12 Score=99.92 Aligned_cols=139 Identities=12% Similarity=0.006 Sum_probs=86.8
Q ss_pred CeEeecCC---eEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEE-EEeeCCeEEEEeecCCCCcceeEEEeccCC
Q 032092 1 MVVGTADR---NLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFW-VGSIEGRVGVHHLDDSQQSKNFTFKCHRDG 76 (147)
Q Consensus 1 l~~gs~dg---~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~-~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~ 76 (147)
|++++.++ .|++||+++++. . .+. .+...+.+++|+|||+.|+ +++.||...||.||+.+++. ..+..|...
T Consensus 193 la~~s~~~~~~~i~~~d~~tg~~-~-~l~-~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~ 268 (415)
T 2hqs_A 193 LAYVTFESGRSALVIQTLANGAV-R-QVA-SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSN 268 (415)
T ss_dssp EEEEECTTSSCEEEEEETTTCCE-E-EEE-CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSC
T ss_pred EEEEEecCCCcEEEEEECCCCcE-E-Eee-cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCc
Confidence 46677664 999999998853 2 333 2345689999999999888 66667764444488876554 455555533
Q ss_pred c--eEEeeccceeeeecCCCc-ceee-eeeee-eeeee----eceEEEEEecCCCeEEEeCCC---CcEEEeecCCcee
Q 032092 77 S--ETCSVISFTSILAGDAPK-YSSF-YKVKR-LHLFV----KSHVIVLFVQIHHTFATAGSD---GAFNFWDKDSKQR 143 (147)
Q Consensus 77 ~--~~~~v~~~~~~~~~~~~~-~~~~-~~~~~-~~~~~----~~~~~~~fspdg~~latg~~D---g~i~iWd~~~~~~ 143 (147)
. ..+..+.-.++.++.+++ ..++ +++.. ....+ .....++|+|||++|+.++.+ ..|++||+++++.
T Consensus 269 ~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 269 NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred ccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 2 234444443444444332 2222 12211 11111 223468999999999888764 5899999988765
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.39 E-value=5.1e-12 Score=98.78 Aligned_cols=95 Identities=13% Similarity=0.016 Sum_probs=70.1
Q ss_pred CeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCC---eEEEEeecCCCCcceeEEEeccCCceEEeecc
Q 032092 8 RNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEG---RVGVHHLDDSQQSKNFTFKCHRDGSETCSVIS 84 (147)
Q Consensus 8 g~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg---~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~ 84 (147)
+.|++||+...+ + ..+. .+...+.+++|||||+.|++++.++ .|++ ||+.+++.. .+..|.. .+.+
T Consensus 159 ~~i~i~d~~g~~-~-~~l~-~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~--~d~~tg~~~-~l~~~~~-----~~~~ 227 (415)
T 2hqs_A 159 YELRVSDYDGYN-Q-FVVH-RSPQPLMSPAWSPDGSKLAYVTFESGRSALVI--QTLANGAVR-QVASFPR-----HNGA 227 (415)
T ss_dssp EEEEEEETTSCS-C-EEEE-EESSCEEEEEECTTSSEEEEEECTTSSCEEEE--EETTTCCEE-EEECCSS-----CEEE
T ss_pred ceEEEEcCCCCC-C-EEEe-CCCCcceeeEEcCCCCEEEEEEecCCCcEEEE--EECCCCcEE-EeecCCC-----cccC
Confidence 799999998643 2 3332 2345799999999999999999885 8988 777766553 4554543 2334
Q ss_pred ceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEE-EeCCCCc--EEEeecCCcee
Q 032092 85 FTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFA-TAGSDGA--FNFWDKDSKQR 143 (147)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~la-tg~~Dg~--i~iWd~~~~~~ 143 (147)
. +|+|||+.|| +++.|+. |++||+++++.
T Consensus 228 ~------------------------------~~spdg~~la~~~~~~g~~~i~~~d~~~~~~ 259 (415)
T 2hqs_A 228 P------------------------------AFSPDGSKLAFALSKTGSLNLYVMDLASGQI 259 (415)
T ss_dssp E------------------------------EECTTSSEEEEEECTTSSCEEEEEETTTCCE
T ss_pred E------------------------------EEcCCCCEEEEEEecCCCceEEEEECCCCCE
Confidence 4 9999999877 7766665 99999988765
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.37 E-value=1.4e-11 Score=91.97 Aligned_cols=105 Identities=10% Similarity=0.008 Sum_probs=75.8
Q ss_pred eEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEee-CCeEEEEeecCCCCcc-eeEEEeccCCceE
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSI-EGRVGVHHLDDSQQSK-NFTFKCHRDGSET 79 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~-dg~i~i~~~d~~~~~~-~~~~~~h~~~~~~ 79 (147)
++++.++.|++||+.+++. ...+..+. .++ .++|+|||+++++++. ++.|.+ ||..+++. ...+..+..
T Consensus 14 v~~~~~~~v~~~d~~~~~~-~~~~~~~~-~~~-~~~~s~dg~~l~~~~~~~~~i~~--~d~~~~~~~~~~~~~~~~---- 84 (331)
T 3u4y_A 14 VVEQHLRRISFFSTDTLEI-LNQITLGY-DFV-DTAITSDCSNVVVTSDFCQTLVQ--IETQLEPPKVVAIQEGQS---- 84 (331)
T ss_dssp EEEGGGTEEEEEETTTCCE-EEEEECCC-CEE-EEEECSSSCEEEEEESTTCEEEE--EECSSSSCEEEEEEECSS----
T ss_pred EEecCCCeEEEEeCcccce-eeeEEccC-Ccc-eEEEcCCCCEEEEEeCCCCeEEE--EECCCCceeEEecccCCC----
Confidence 6778899999999999864 34443332 345 9999999997666555 889988 77776666 555544432
Q ss_pred EeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCC---cEEEeecCCceeeec
Q 032092 80 CSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDG---AFNFWDKDSKQRLKV 146 (147)
Q Consensus 80 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg---~i~iWd~~~~~~~~~ 146 (147)
+...+ +|+|||++|+++..++ .|.+||+++++.+.+
T Consensus 85 -~~~~~------------------------------~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~ 123 (331)
T 3u4y_A 85 -SMADV------------------------------DITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIST 123 (331)
T ss_dssp -CCCCE------------------------------EECTTSSEEEECCCSSSSCEEEEEETTTTEEEEE
T ss_pred -Cccce------------------------------EECCCCCEEEEecCCCCcccEEEEECCCCCeEEE
Confidence 22225 9999999988665553 899999999887654
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.36 E-value=2.1e-11 Score=98.74 Aligned_cols=141 Identities=12% Similarity=0.088 Sum_probs=88.6
Q ss_pred CeEeecCCeEEEEEC--CCCccceeEecCCCCcceEEEEEcc----CCCEEEEEe-eCCeEEEEeecCCCCcceeEEEec
Q 032092 1 MVVGTADRNLVVFNL--QNPQTEFKRINSPLKYQMRCVAAFP----DQQGFWVGS-IEGRVGVHHLDDSQQSKNFTFKCH 73 (147)
Q Consensus 1 l~~gs~dg~v~iwdi--~~~~~~~~~~~~~~~~~i~~la~sp----dg~~l~~g~-~dg~i~i~~~d~~~~~~~~~~~~h 73 (147)
|++++.|++|++||+ .+++ ...++.. ...++.++|+| ||+++++++ .+++|.+ ||..+++.+.++..+
T Consensus 193 l~v~~~d~~V~v~D~~~~t~~-~~~~i~~--g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v--~D~~t~~~~~~i~~~ 267 (543)
T 1nir_A 193 LLVIGRDARIDMIDLWAKEPT-KVAEIKI--GIEARSVESSKFKGYEDRYTIAGAYWPPQFAI--MDGETLEPKQIVSTR 267 (543)
T ss_dssp EEEEETTSEEEEEETTSSSCE-EEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEEESSEEEE--EETTTCCEEEEEECC
T ss_pred EEEECCCCeEEEEECcCCCCc-EEEEEec--CCCcceEEeCCCcCCCCCEEEEEEccCCeEEE--Eeccccccceeeccc
Confidence 467889999999999 7764 3444542 23579999999 999998887 5899999 787778877777542
Q ss_pred c----------C-Cc--eEEeeccceeeeecCCC-cceeeee--eeeee-eeee---ceEEEEEecCCCeEE-EeCCCCc
Q 032092 74 R----------D-GS--ETCSVISFTSILAGDAP-KYSSFYK--VKRLH-LFVK---SHVIVLFVQIHHTFA-TAGSDGA 132 (147)
Q Consensus 74 ~----------~-~~--~~~~v~~~~~~~~~~~~-~~~~~~~--~~~~~-~~~~---~~~~~~fspdg~~la-tg~~Dg~ 132 (147)
. . .. .......-.++.+..++ .+.++.- .+... ..+. .-..++|+|||++|+ ++..|++
T Consensus 268 g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~ 347 (543)
T 1nir_A 268 GMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNK 347 (543)
T ss_dssp EECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTE
T ss_pred CcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCe
Confidence 1 1 10 11111111223333333 3333321 11010 1111 113579999999765 4556899
Q ss_pred EEEeecCCceeeec
Q 032092 133 FNFWDKDSKQRLKV 146 (147)
Q Consensus 133 i~iWd~~~~~~~~~ 146 (147)
|.+||+++++++.+
T Consensus 348 v~v~D~~tg~l~~~ 361 (543)
T 1nir_A 348 VAVIDSKDRRLSAL 361 (543)
T ss_dssp EEEEETTTTEEEEE
T ss_pred EEEEECCCCeEEEe
Confidence 99999999988764
No 134
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.35 E-value=1.5e-11 Score=91.34 Aligned_cols=113 Identities=12% Similarity=-0.016 Sum_probs=79.6
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCc-ceEEEEEccCCCEE-EEEeeCCeEEEEeecCCCCcceeEEEeccCCce
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKY-QMRCVAAFPDQQGF-WVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~-~i~~la~spdg~~l-~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~ 78 (147)
|++++.++.|++||+.+++. ...+..+... .+..++|+|||+.+ +++..++.|.+ ||+.+++...++........
T Consensus 4 ~v~~~~~~~v~~~d~~~~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~--~d~~~~~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 4 ILAPARPDKLVVIDTEKMAV-DKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK--IDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp EEEEETTTEEEEEETTTTEE-EEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEE--EETTTCCEEEEEECCBTTEE
T ss_pred EEEcCCCCeEEEEECCCCcE-EEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEE--EECCCCCeEeeEEcCCcccc
Confidence 57889999999999998853 3444333211 37899999999865 55666889999 78777776665542111001
Q ss_pred EEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeC------------CCCcEEEeecCCceeeec
Q 032092 79 TCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAG------------SDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~------------~Dg~i~iWd~~~~~~~~~ 146 (147)
...+..+ +|+|||++|+.++ .|+.|.+||+++++.+..
T Consensus 81 ~~~~~~~------------------------------~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~ 130 (337)
T 1pby_B 81 VKSLFGA------------------------------ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKA 130 (337)
T ss_dssp EECTTCE------------------------------EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEE
T ss_pred cccccce------------------------------EECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEE
Confidence 1123444 9999999888886 579999999998877653
No 135
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.34 E-value=1.4e-11 Score=92.11 Aligned_cols=109 Identities=16% Similarity=0.143 Sum_probs=76.8
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEE-EEEeeCCeEEEEeecCCCCcceeEEEeccC-Cce
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGF-WVGSIEGRVGVHHLDDSQQSKNFTFKCHRD-GSE 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l-~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~-~~~ 78 (147)
+++++.+++|++||+.+++. ...+..+....+..++|+|||+.+ +++..++.|.+ ||+.+++....+..+.. ...
T Consensus 14 ~v~~~~~~~v~~~d~~~~~~-~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~--~d~~t~~~~~~~~~~~~~~~~ 90 (349)
T 1jmx_B 14 MIVTNYPNNLHVVDVASDTV-YKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYG--IDLDTCKNTFHANLSSVPGEV 90 (349)
T ss_dssp EEEEETTTEEEEEETTTTEE-EEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEE--EETTTTEEEEEEESCCSTTEE
T ss_pred EEEeCCCCeEEEEECCCCcE-EEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEE--EeCCCCcEEEEEEcccccccc
Confidence 46788999999999998853 344443322247899999999865 45567899999 78777766655542211 000
Q ss_pred EEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCC------------CcEEEeecCCce
Q 032092 79 TCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSD------------GAFNFWDKDSKQ 142 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~D------------g~i~iWd~~~~~ 142 (147)
...+..+ +|+|||++|++++.+ +.|.+||+++++
T Consensus 91 ~~~~~~~------------------------------~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 91 GRSMYSF------------------------------AISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp EECSSCE------------------------------EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred cccccce------------------------------EECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 1124455 999999999998866 899999998744
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.32 E-value=1.1e-11 Score=92.22 Aligned_cols=100 Identities=13% Similarity=0.112 Sum_probs=67.8
Q ss_pred eEeecCCeEEEEECCC-Cc-cceeEecCCCCcceEEEEEccCCCEEEEEeeC-CeEEEEeecCCCCcc--eeEEEeccCC
Q 032092 2 VVGTADRNLVVFNLQN-PQ-TEFKRINSPLKYQMRCVAAFPDQQGFWVGSIE-GRVGVHHLDDSQQSK--NFTFKCHRDG 76 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~-~~-~~~~~~~~~~~~~i~~la~spdg~~l~~g~~d-g~i~i~~~d~~~~~~--~~~~~~h~~~ 76 (147)
++++.|+.|++||+.. ++ +....+. +...+.+++|+|+|+++++++.+ +.|.+|+++..+++. +..+..+.
T Consensus 9 ~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-- 84 (343)
T 1ri6_A 9 IASPESQQIHVWNLNHEGALTLTQVVD--VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-- 84 (343)
T ss_dssp EEEGGGTEEEEEEECTTSCEEEEEEEE--CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS--
T ss_pred EeCCCCCeEEEEEECCCCcEEEeeeEe--cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC--
Confidence 3447899999999963 32 1222222 33468899999999998888876 999997776544442 22332221
Q ss_pred ceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeC-CCCcEEEeecC
Q 032092 77 SETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAG-SDGAFNFWDKD 139 (147)
Q Consensus 77 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~-~Dg~i~iWd~~ 139 (147)
.+..+ +|+|+|++|+.++ .++.|++||+.
T Consensus 85 ----~~~~~------------------------------~~s~dg~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 85 ----SLTHI------------------------------STDHQGQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp ----CCSEE------------------------------EECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ----CCcEE------------------------------EEcCCCCEEEEEecCCCeEEEEECC
Confidence 23444 9999998775554 58899999993
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.30 E-value=9.5e-11 Score=87.75 Aligned_cols=107 Identities=12% Similarity=0.089 Sum_probs=78.9
Q ss_pred eEeecCCeEEEEECCCCccceeEecCCCCc--------ceEEEEEccCCCEEEEEe--eCCeEEEEeecCCCCcceeEEE
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINSPLKY--------QMRCVAAFPDQQGFWVGS--IEGRVGVHHLDDSQQSKNFTFK 71 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~--------~i~~la~spdg~~l~~g~--~dg~i~i~~~d~~~~~~~~~~~ 71 (147)
+++..++.|.+||+.+++. ...+..+... .+.+++|+|+|+.+++++ .++.|.+ ||..+++....+.
T Consensus 105 v~~~~~~~v~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~--~d~~~~~~~~~~~ 181 (353)
T 3vgz_A 105 FGNTVNSAVTAIDAKTGEV-KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWV--VDGGNIKLKTAIQ 181 (353)
T ss_dssp EEETTTTEEEEEETTTCCE-EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEE--EETTTTEEEEEEC
T ss_pred EEecCCCEEEEEeCCCCee-EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEE--EcCCCCceEEEec
Confidence 3445679999999999863 3334322111 268899999999877776 4788988 7887777766665
Q ss_pred eccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 72 CHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 72 ~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.+.. .+..+ +|+|||++|+.++.|+.|.+||..+++.+.+
T Consensus 182 ~~~~-----~~~~~------------------------------~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~ 221 (353)
T 3vgz_A 182 NTGK-----MSTGL------------------------------ALDSEGKRLYTTNADGELITIDTADNKILSR 221 (353)
T ss_dssp CCCT-----TCCCC------------------------------EEETTTTEEEEECTTSEEEEEETTTTEEEEE
T ss_pred CCCC-----ccceE------------------------------EECCCCCEEEEEcCCCeEEEEECCCCeEEEE
Confidence 3322 24555 9999999999999999999999999887654
No 138
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.29 E-value=3.8e-11 Score=89.12 Aligned_cols=97 Identities=11% Similarity=0.095 Sum_probs=72.4
Q ss_pred eEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEEeeccceee
Q 032092 9 NLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVISFTSI 88 (147)
Q Consensus 9 ~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~~~~~ 88 (147)
.|.+||+++++...... .++...+.+++|+|||++++++ ++.|.+ ||..+++....+..+. .+.++
T Consensus 220 ~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~--~~~v~~--~d~~~~~~~~~~~~~~------~~~~~--- 285 (337)
T 1pby_B 220 GLLTMDLETGEMAMREV-RIMDVFYFSTAVNPAKTRAFGA--YNVLES--FDLEKNASIKRVPLPH------SYYSV--- 285 (337)
T ss_dssp EEEEEETTTCCEEEEEE-EECSSCEEEEEECTTSSEEEEE--ESEEEE--EETTTTEEEEEEECSS------CCCEE---
T ss_pred ceEEEeCCCCCceEeec-CCCCCceeeEEECCCCCEEEEe--CCeEEE--EECCCCcCcceecCCC------ceeeE---
Confidence 57999999986421111 1233457889999999999888 699999 7777666665554322 23444
Q ss_pred eecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 89 LAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
+|+|||++|++++.|+.|++||+++++.+.+
T Consensus 286 ---------------------------~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~ 316 (337)
T 1pby_B 286 ---------------------------NVSTDGSTVWLGGALGDLAAYDAETLEKKGQ 316 (337)
T ss_dssp ---------------------------EECTTSCEEEEESBSSEEEEEETTTCCEEEE
T ss_pred ---------------------------EECCCCCEEEEEcCCCcEEEEECcCCcEEEE
Confidence 9999999999999999999999999887764
No 139
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.26 E-value=6.9e-10 Score=83.56 Aligned_cols=143 Identities=11% Similarity=0.056 Sum_probs=80.8
Q ss_pred eEeecCCeEEEEECC-CCccc-eeEecCCCCcceEEEEEccCCCEEEE-EeeCCeEEEEeecCCCCcce--eEEEeccCC
Q 032092 2 VVGTADRNLVVFNLQ-NPQTE-FKRINSPLKYQMRCVAAFPDQQGFWV-GSIEGRVGVHHLDDSQQSKN--FTFKCHRDG 76 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~-~~~~~-~~~~~~~~~~~i~~la~spdg~~l~~-g~~dg~i~i~~~d~~~~~~~--~~~~~h~~~ 76 (147)
+++..++.|++||+. +++.. ......+....++.++|+|||+++++ +..++.|.+|+++..+++.. ..+......
T Consensus 156 v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~ 235 (347)
T 3hfq_A 156 VIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPAD 235 (347)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTT
T ss_pred EEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCC
Confidence 445568899999998 44311 11112222235788999999996554 66789999977776444432 222222110
Q ss_pred --------ceEEeeccceeeeec-CCCcceeeeee----eeeeeeeec----eEEEEEecCCCeEEEeCC-CCcEEEe--
Q 032092 77 --------SETCSVISFTSILAG-DAPKYSSFYKV----KRLHLFVKS----HVIVLFVQIHHTFATAGS-DGAFNFW-- 136 (147)
Q Consensus 77 --------~~~~~v~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~----~~~~~fspdg~~latg~~-Dg~i~iW-- 136 (147)
...+..+.-.+.+++ .+..+.++..- .+....+.. ...++|+|||++|++++. ++.|.+|
T Consensus 236 ~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 236 YTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYAR 315 (347)
T ss_dssp CCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEE
Confidence 122333333333333 33444443311 012222322 357899999998877766 4899999
Q ss_pred ecCCceee
Q 032092 137 DKDSKQRL 144 (147)
Q Consensus 137 d~~~~~~~ 144 (147)
|.+++++.
T Consensus 316 d~~tg~l~ 323 (347)
T 3hfq_A 316 DLTSGKLS 323 (347)
T ss_dssp CTTTCCEE
T ss_pred eCCCCeEE
Confidence 55666654
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.26 E-value=2.2e-10 Score=85.36 Aligned_cols=138 Identities=13% Similarity=0.012 Sum_probs=84.2
Q ss_pred EeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCC---eEEEEeecCCCCcceeEEEeccCC-ce
Q 032092 3 VGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEG---RVGVHHLDDSQQSKNFTFKCHRDG-SE 78 (147)
Q Consensus 3 ~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg---~i~i~~~d~~~~~~~~~~~~h~~~-~~ 78 (147)
++..++.|.+||+.+++.....+. .+..+..+++|+|||++++++..++ .|.+ ||..+++....+..+... ..
T Consensus 57 ~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v--~d~~~~~~~~~~~~~~~~~~~ 133 (331)
T 3u4y_A 57 TSDFCQTLVQIETQLEPPKVVAIQ-EGQSSMADVDITPDDQFAVTVTGLNHPFNMQS--YSFLKNKFISTIPIPYDAVGI 133 (331)
T ss_dssp EESTTCEEEEEECSSSSCEEEEEE-ECSSCCCCEEECTTSSEEEECCCSSSSCEEEE--EETTTTEEEEEEECCTTEEEE
T ss_pred EeCCCCeEEEEECCCCceeEEecc-cCCCCccceEECCCCCEEEEecCCCCcccEEE--EECCCCCeEEEEECCCCccce
Confidence 344488999999998864233333 2233444499999999998766663 8999 777777766666543221 12
Q ss_pred EEeeccceeeeecCC-Cc-ceeeee-----eeee-eeee---eceEEEEEecCCCe-EEEeCCCCcEEEeecCCcee
Q 032092 79 TCSVISFTSILAGDA-PK-YSSFYK-----VKRL-HLFV---KSHVIVLFVQIHHT-FATAGSDGAFNFWDKDSKQR 143 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~-~~-~~~~~~-----~~~~-~~~~---~~~~~~~fspdg~~-latg~~Dg~i~iWd~~~~~~ 143 (147)
.+..+.-.+++++.+ .. +..+.. +... ...+ .+...++|+|||++ ++++..++.|++||+++++.
T Consensus 134 ~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 134 AISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp EECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred EECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 333333234444333 34 443331 1111 1111 23457899999985 56666789999999998876
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.25 E-value=2.8e-10 Score=85.14 Aligned_cols=106 Identities=14% Similarity=0.165 Sum_probs=76.4
Q ss_pred CeEeecCCeEEEEECCCCccceeEecC---CCCcceEEEEEccCCCEEEEEee-CCeEEEEeecCCCCcceeEEEeccCC
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINS---PLKYQMRCVAAFPDQQGFWVGSI-EGRVGVHHLDDSQQSKNFTFKCHRDG 76 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~---~~~~~i~~la~spdg~~l~~g~~-dg~i~i~~~d~~~~~~~~~~~~h~~~ 76 (147)
|++++.++.|.+||+.+++. ...+.. .....+..++|+|||+++++++. ++.|.+ ||..+++....+....
T Consensus 199 l~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~--~d~~~~~~~~~~~~~~-- 273 (353)
T 3vgz_A 199 LYTTNADGELITIDTADNKI-LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLV--VDTRNGNILAKVAAPE-- 273 (353)
T ss_dssp EEEECTTSEEEEEETTTTEE-EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEE--EETTTCCEEEEEECSS--
T ss_pred EEEEcCCCeEEEEECCCCeE-EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEE--EECCCCcEEEEEEcCC--
Confidence 45677899999999999864 333332 12334788999999997766654 599999 7887777666554321
Q ss_pred ceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCe-EEEeCCCCcEEEeecCCceeeec
Q 032092 77 SETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHT-FATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 77 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~-latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
...+ +|+|||++ +++...++.|.+||.++++.+.+
T Consensus 274 -----~~~~------------------------------~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 274 -----SLAV------------------------------LFNPARNEAYVTHRQAGKVSVIDAKSYKVVKT 309 (353)
T ss_dssp -----CCCE------------------------------EEETTTTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred -----CceE------------------------------EECCCCCEEEEEECCCCeEEEEECCCCeEEEE
Confidence 1234 99999984 55666799999999999887654
No 142
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.25 E-value=7.5e-11 Score=101.43 Aligned_cols=102 Identities=8% Similarity=0.084 Sum_probs=78.6
Q ss_pred eEeecCCeEE-EEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEE
Q 032092 2 VVGTADRNLV-VFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETC 80 (147)
Q Consensus 2 ~~gs~dg~v~-iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~ 80 (147)
++++.++.+. +||+.+++. ..+. .+...+.+++|||||++|++++.++.|++ ||+.+++....+.+|..
T Consensus 352 ~~~s~~~~l~~~~d~~~~~~--~~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~--~d~~tg~~~~~~~~~~~----- 421 (1045)
T 1k32_A 352 IHGTREGDFLGIYDYRTGKA--EKFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMT--VDLETGKPTVIERSREA----- 421 (1045)
T ss_dssp EEEETTEEEEEEEETTTCCE--EECC-CCCCSEEEEEECTTSSEEEEEETTSEEEE--EETTTCCEEEEEECSSS-----
T ss_pred EEEECCCceEEEEECCCCCc--eEec-CCccceeeeEECCCCCEEEEECCCCeEEE--EECCCCceEEeccCCCC-----
Confidence 5566677888 899987642 2333 44456899999999999999999999999 77777766655556653
Q ss_pred eeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCC----------cEEEeecCCcee
Q 032092 81 SVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDG----------AFNFWDKDSKQR 143 (147)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg----------~i~iWd~~~~~~ 143 (147)
.+.++ +|||||++||+++.++ .|++||+.+++.
T Consensus 422 ~v~~~------------------------------~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~ 464 (1045)
T 1k32_A 422 MITDF------------------------------TISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI 464 (1045)
T ss_dssp CCCCE------------------------------EECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE
T ss_pred Cccce------------------------------EECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcE
Confidence 34555 9999999999887654 899999988763
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.24 E-value=6.2e-11 Score=85.88 Aligned_cols=95 Identities=13% Similarity=0.010 Sum_probs=66.7
Q ss_pred eecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCC-CcceeEEEeccCCceEEee
Q 032092 4 GTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQ-QSKNFTFKCHRDGSETCSV 82 (147)
Q Consensus 4 gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~-~~~~~~~~~h~~~~~~~~v 82 (147)
++.|++|++||+.+++. .... .+...+.+++|+|||++|++++ ++.|.+ ||..+ ++....+..|... .+
T Consensus 18 ~~~~~~i~~~d~~~~~~-~~~~--~~~~~v~~~~~spdg~~l~~~~-~~~i~~--~d~~~~~~~~~~~~~~~~~----~~ 87 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKM-RVVW--QTPELFEAPNWSPDGKYLLLNS-EGLLYR--LSLAGDPSPEKVDTGFATI----CN 87 (297)
T ss_dssp CCCCEEEEEEETTTTEE-EEEE--EESSCCEEEEECTTSSEEEEEE-TTEEEE--EESSSCCSCEECCCTTCCC----BC
T ss_pred CCcceeEEEEeCCCCce-eeec--cCCcceEeeEECCCCCEEEEEc-CCeEEE--EeCCCCCCceEeccccccc----cc
Confidence 46789999999998753 2222 2345799999999999999976 889999 67665 5554333333211 35
Q ss_pred ccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeC--CCCcEEEeec
Q 032092 83 ISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAG--SDGAFNFWDK 138 (147)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~--~Dg~i~iWd~ 138 (147)
..+ +|+|||++|++++ .|+..+||..
T Consensus 88 ~~~------------------------------~~spdg~~l~~~~~~~~~~~~l~~~ 115 (297)
T 2ojh_A 88 NDH------------------------------GISPDGALYAISDKVEFGKSAIYLL 115 (297)
T ss_dssp SCC------------------------------EECTTSSEEEEEECTTTSSCEEEEE
T ss_pred cce------------------------------EECCCCCEEEEEEeCCCCcceEEEE
Confidence 556 9999999999988 3345555544
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.23 E-value=4.3e-11 Score=98.67 Aligned_cols=104 Identities=13% Similarity=0.021 Sum_probs=72.5
Q ss_pred CeEeec-CC-----eEEEEECCCCccceeEecCC-CC----------------------cceEEEEEccCCCEEEEEeeC
Q 032092 1 MVVGTA-DR-----NLVVFNLQNPQTEFKRINSP-LK----------------------YQMRCVAAFPDQQGFWVGSIE 51 (147)
Q Consensus 1 l~~gs~-dg-----~v~iwdi~~~~~~~~~~~~~-~~----------------------~~i~~la~spdg~~l~~g~~d 51 (147)
|++++. |+ .|++||+.+++. ....... .. ..+.+++|||||++|++++.
T Consensus 51 la~~~~~d~~~~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~- 128 (741)
T 2ecf_A 51 VTFLRGKDSDRNQLDLWSYDIGSGQT-RLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG- 128 (741)
T ss_dssp EEEEECCSSCTTEEEEEEEETTTCCE-EEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-
T ss_pred EEEEeccCCCCcccEEEEEECCCCce-eEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-
Confidence 466776 77 999999998853 2222211 11 23789999999999999886
Q ss_pred CeEEEEeecCCCCc--ceeEEEeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCC
Q 032092 52 GRVGVHHLDDSQQS--KNFTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGS 129 (147)
Q Consensus 52 g~i~i~~~d~~~~~--~~~~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~ 129 (147)
++|.+ ||+.++. ....+..|.. .+... +|||||++||.++
T Consensus 129 ~~i~~--~d~~~~~~~~~~~l~~~~~-----~~~~~------------------------------~~SPDG~~la~~~- 170 (741)
T 2ecf_A 129 GELYL--YDLKQEGKAAVRQLTHGEG-----FATDA------------------------------KLSPKGGFVSFIR- 170 (741)
T ss_dssp TEEEE--EESSSCSTTSCCBCCCSSS-----CEEEE------------------------------EECTTSSEEEEEE-
T ss_pred CcEEE--EECCCCCcceEEEcccCCc-----ccccc------------------------------cCCCCCCEEEEEe-
Confidence 99999 6665552 3333443432 13333 9999999999986
Q ss_pred CCcEEEeecCCceee
Q 032092 130 DGAFNFWDKDSKQRL 144 (147)
Q Consensus 130 Dg~i~iWd~~~~~~~ 144 (147)
++.|++||+.+++..
T Consensus 171 ~~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 171 GRNLWVIDLASGRQM 185 (741)
T ss_dssp TTEEEEEETTTTEEE
T ss_pred CCcEEEEecCCCCEE
Confidence 568999999887654
No 145
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.22 E-value=6.6e-11 Score=85.76 Aligned_cols=104 Identities=11% Similarity=0.001 Sum_probs=71.7
Q ss_pred EeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEe-eCCeEEEEeecCCCCcceeEEEeccCCceEEe
Q 032092 3 VGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGS-IEGRVGVHHLDDSQQSKNFTFKCHRDGSETCS 81 (147)
Q Consensus 3 ~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~-~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~ 81 (147)
+++.++.++||++.........+. .+...+.+++|+|+|+.+++++ .++.++||.++... .....+..|.. .
T Consensus 146 ~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~-----~ 218 (297)
T 2ojh_A 146 CGIRDQVFDIYSMDIDSGVETRLT-HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG-SSVERITDSAY-----G 218 (297)
T ss_dssp EEEETTEEEEEEEETTTCCEEECC-CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-SCEEECCCCSE-----E
T ss_pred EECCCCceEEEEEECCCCcceEcc-cCCCccccceECCCCCEEEEEecCCCCccEEEECCCC-CCcEEEecCCc-----c
Confidence 677899999999643222222332 2345689999999999888766 48999998777543 33334433321 2
Q ss_pred eccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCC-----------CcEEEeecCCcee
Q 032092 82 VISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSD-----------GAFNFWDKDSKQR 143 (147)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~D-----------g~i~iWd~~~~~~ 143 (147)
+..+ +|+|+|++|+.++.| +.|++||+++++.
T Consensus 219 ~~~~------------------------------~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 219 DWFP------------------------------HPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EEEE------------------------------EECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred cCCe------------------------------EECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 3333 999999999888876 5699999988654
No 146
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.22 E-value=4.3e-11 Score=96.52 Aligned_cols=108 Identities=10% Similarity=-0.001 Sum_probs=74.3
Q ss_pred eEeecC----CeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCC--eEEEEeecCCCCcceeEEEeccC
Q 032092 2 VVGTAD----RNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEG--RVGVHHLDDSQQSKNFTFKCHRD 75 (147)
Q Consensus 2 ~~gs~d----g~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg--~i~i~~~d~~~~~~~~~~~~h~~ 75 (147)
++++.+ +.|++||+.+++. ..+. .+...+.+++|||||+.|+++..+| +|++ ||..+++.. .+.+|..
T Consensus 165 a~~~~~~~~~~~i~~~d~~~g~~--~~l~-~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~--~d~~~~~~~-~~~~~~~ 238 (582)
T 3o4h_A 165 AGLGFFGGGRVSLFTSNLSSGGL--RVFD-SGEGSFSSASISPGMKVTAGLETAREARLVT--VDPRDGSVE-DLELPSK 238 (582)
T ss_dssp EEEEEEETTEEEEEEEETTTCCC--EEEC-CSSCEEEEEEECTTSCEEEEEECSSCEEEEE--ECTTTCCEE-ECCCSCS
T ss_pred EEEEEcCCCCeEEEEEcCCCCCc--eEee-cCCCccccceECCCCCEEEEccCCCeeEEEE--EcCCCCcEE-EccCCCc
Confidence 445555 7899999998753 2343 3445689999999999999888899 6666 787766655 4444432
Q ss_pred CceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceee
Q 032092 76 GSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRL 144 (147)
Q Consensus 76 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~ 144 (147)
.+.+.. + .+.....|+|||+++++++.|+.++||++ ++.+
T Consensus 239 -----~~~~~~----~------------------~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 239 -----DFSSYR----P------------------TAITWLGYLPDGRLAVVARREGRSAVFID--GERV 278 (582)
T ss_dssp -----HHHHHC----C------------------SEEEEEEECTTSCEEEEEEETTEEEEEET--TEEE
T ss_pred -----Chhhhh----h------------------ccccceeEcCCCcEEEEEEcCCcEEEEEE--CCee
Confidence 122220 0 00001149999999999999999999998 5544
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.21 E-value=7.7e-11 Score=87.64 Aligned_cols=105 Identities=12% Similarity=0.069 Sum_probs=68.3
Q ss_pred CeEeecC-CeEEEEECC--CCcc-ceeEecCCCCcceEEEEEccCCCEEEEEe-eCCeEEEEeecC-CCCcceeEEEecc
Q 032092 1 MVVGTAD-RNLVVFNLQ--NPQT-EFKRINSPLKYQMRCVAAFPDQQGFWVGS-IEGRVGVHHLDD-SQQSKNFTFKCHR 74 (147)
Q Consensus 1 l~~gs~d-g~v~iwdi~--~~~~-~~~~~~~~~~~~i~~la~spdg~~l~~g~-~dg~i~i~~~d~-~~~~~~~~~~~h~ 74 (147)
|++++.+ +.|++||+. +++. .+..+.. . ..+..++|+|+|+++++++ .++.|.+|+.+. ...+....+..+.
T Consensus 52 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 129 (343)
T 1ri6_A 52 LYVGVRPEFRVLAYRIAPDDGALTFAAESAL-P-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD 129 (343)
T ss_dssp EEEEETTTTEEEEEEECTTTCCEEEEEEEEC-S-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT
T ss_pred EEEeecCCCeEEEEEecCCCCceeecccccc-C-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCC
Confidence 3555555 999999998 4432 1222322 1 2578999999999876665 489999955531 1122222222221
Q ss_pred CCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeC-CCCcEEEeecCC-cee
Q 032092 75 DGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAG-SDGAFNFWDKDS-KQR 143 (147)
Q Consensus 75 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~-~Dg~i~iWd~~~-~~~ 143 (147)
.+..+ +|+|+|++|++++ .|+.|++||+.+ ++.
T Consensus 130 ------~~~~~------------------------------~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 130 ------GCHSA------------------------------NISPDNRTLWVPALKQDRICLFTVSDDGHL 164 (343)
T ss_dssp ------TBCCC------------------------------EECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred ------CceEE------------------------------EECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence 24455 9999998777776 899999999987 543
No 148
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.20 E-value=2.5e-11 Score=99.93 Aligned_cols=100 Identities=14% Similarity=0.165 Sum_probs=71.0
Q ss_pred eEeecCCeEEEEECCCCccceeEecCCCCc---ceEEEEEccCCCEEEEEee---------CCeEEEEeecCCCCcce--
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINSPLKY---QMRCVAAFPDQQGFWVGSI---------EGRVGVHHLDDSQQSKN-- 67 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~---~i~~la~spdg~~l~~g~~---------dg~i~i~~~d~~~~~~~-- 67 (147)
+..+.|++|++||+.+++. .... ..+.. .+.+++|||||++|+.++. +++|++ ||+.+++..
T Consensus 30 ~~~~~d~~i~~~~~~~g~~-~~~~-~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~--~d~~~g~~~~~ 105 (719)
T 1z68_A 30 LHQSADNNIVLYNIETGQS-YTIL-SNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYI--YDLSNGEFVRG 105 (719)
T ss_dssp EEECTTSCEEEEESSSCCE-EEEE-CHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEE--EETTTTEECCS
T ss_pred EEEcCCCCEEEEEcCCCcE-EEEE-ccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEE--EECCCCccccc
Confidence 3445799999999999863 2222 22211 3889999999999998877 788988 676655431
Q ss_pred eEEEeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceee
Q 032092 68 FTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRL 144 (147)
Q Consensus 68 ~~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~ 144 (147)
..+. . .+... +|||||+.||.+. |+.|++||+.+++..
T Consensus 106 ~~l~---~-----~~~~~------------------------------~~SPDG~~la~~~-~~~i~~~~~~~g~~~ 143 (719)
T 1z68_A 106 NELP---R-----PIQYL------------------------------CWSPVGSKLAYVY-QNNIYLKQRPGDPPF 143 (719)
T ss_dssp SCCC---S-----SBCCE------------------------------EECSSTTCEEEEE-TTEEEEESSTTSCCE
T ss_pred eecC---c-----ccccc------------------------------eECCCCCEEEEEE-CCeEEEEeCCCCCcE
Confidence 1111 0 13344 9999999999985 889999999877643
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.18 E-value=2.8e-11 Score=99.38 Aligned_cols=103 Identities=8% Similarity=-0.033 Sum_probs=71.6
Q ss_pred eecCCeEEEEECCCCccceeEecCCCCc---ceEEEEEccCCCEEEEEeeC---------CeEEEEeecCCCCcceeEEE
Q 032092 4 GTADRNLVVFNLQNPQTEFKRINSPLKY---QMRCVAAFPDQQGFWVGSIE---------GRVGVHHLDDSQQSKNFTFK 71 (147)
Q Consensus 4 gs~dg~v~iwdi~~~~~~~~~~~~~~~~---~i~~la~spdg~~l~~g~~d---------g~i~i~~~d~~~~~~~~~~~ 71 (147)
.+.||+|++||+.+++. ...+. .+.. .+.+++|||||++|++++.+ +.+.+ ||+.+++. ..+.
T Consensus 33 ~~~dg~i~~~d~~~g~~-~~~~~-~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~--~d~~~~~~-~~l~ 107 (723)
T 1xfd_A 33 REQKGTVRLWNVETNTS-TVLIE-GKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL--SKIPHGDP-QSLD 107 (723)
T ss_dssp CCSSSCEEEBCGGGCCC-EEEEC-TTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE--EESSSCCC-EECC
T ss_pred EeCCCCEEEEECCCCcE-EEEec-cccccccccceEEECCCCCEEEEEecCccceeecceeeEEE--EECCCCce-Eecc
Confidence 36789999999999864 23332 2222 38999999999999998775 67778 66665544 2332
Q ss_pred eccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceee
Q 032092 72 CHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRL 144 (147)
Q Consensus 72 ~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~ 144 (147)
.+.. ....+... +|||||+.||.++. +.|++||+.+++..
T Consensus 108 ~~~~--~~~~~~~~------------------------------~~SPdG~~la~~~~-~~i~~~~~~~g~~~ 147 (723)
T 1xfd_A 108 PPEV--SNAKLQYA------------------------------GWGPKGQQLIFIFE-NNIYYCAHVGKQAI 147 (723)
T ss_dssp CTTC--CSCCCSBC------------------------------CBCSSTTCEEEEET-TEEEEESSSSSCCE
T ss_pred CCcc--cccccccc------------------------------EECCCCCEEEEEEC-CeEEEEECCCCceE
Confidence 2111 00013444 99999999999875 79999999887654
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.17 E-value=1.4e-10 Score=93.57 Aligned_cols=96 Identities=7% Similarity=-0.145 Sum_probs=68.4
Q ss_pred cCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeC----CeEEEEeecCCCCcceeEEEeccCCceEEe
Q 032092 6 ADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIE----GRVGVHHLDDSQQSKNFTFKCHRDGSETCS 81 (147)
Q Consensus 6 ~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~d----g~i~i~~~d~~~~~~~~~~~~h~~~~~~~~ 81 (147)
.++.+.|||+.+++. ..+.... -.+++|||||+.+++++.+ +.|++ ||+.+++. ..+..|.. .
T Consensus 130 ~~~~~~l~d~~~g~~--~~l~~~~---~~~~~~spDG~~la~~~~~~~~~~~i~~--~d~~~g~~-~~l~~~~~-----~ 196 (582)
T 3o4h_A 130 TEDRVALYALDGGGL--RELARLP---GFGFVSDIRGDLIAGLGFFGGGRVSLFT--SNLSSGGL-RVFDSGEG-----S 196 (582)
T ss_dssp CSSCEEEEEEETTEE--EEEEEES---SCEEEEEEETTEEEEEEEEETTEEEEEE--EETTTCCC-EEECCSSC-----E
T ss_pred CCCCceEEEccCCcE--EEeecCC---CceEEECCCCCEEEEEEEcCCCCeEEEE--EcCCCCCc-eEeecCCC-----c
Confidence 344455999998753 2232211 2789999999999988877 66766 77766554 35555543 2
Q ss_pred eccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCC--cEEEeecCCceee
Q 032092 82 VISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDG--AFNFWDKDSKQRL 144 (147)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg--~i~iWd~~~~~~~ 144 (147)
+.+. +|||||++|++++.|+ .|++||+++++..
T Consensus 197 ~~~~------------------------------~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 197 FSSA------------------------------SISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEE------------------------------EECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred cccc------------------------------eECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 3344 9999999999888898 8999999887654
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.16 E-value=4.4e-09 Score=79.59 Aligned_cols=140 Identities=9% Similarity=-0.043 Sum_probs=79.2
Q ss_pred EeecCCeEEEEECCCCcc------ce-----eEecCCCCcceEEEEEccCCCEEEEEe-eCCeEEEEeecCCCCcc--ee
Q 032092 3 VGTADRNLVVFNLQNPQT------EF-----KRINSPLKYQMRCVAAFPDQQGFWVGS-IEGRVGVHHLDDSQQSK--NF 68 (147)
Q Consensus 3 ~gs~dg~v~iwdi~~~~~------~~-----~~~~~~~~~~i~~la~spdg~~l~~g~-~dg~i~i~~~d~~~~~~--~~ 68 (147)
++..++.|++|++..... .. .....+....++.++|+|||+++++++ .+++|.+|+++ +++. ..
T Consensus 172 ~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~--~g~~~~~~ 249 (361)
T 3scy_A 172 DDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYA--DGMLDEIQ 249 (361)
T ss_dssp EETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEE--TTEEEEEE
T ss_pred EeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEec--CCceEEeE
Confidence 344588999999876431 10 112222234578999999999877766 69999995554 4432 22
Q ss_pred EEEeccC---C--ceEEeeccceeeeecCC--Ccceeeeee-e--e--eeeeee---ceEEEEEecCCCeEEEeC-CCCc
Q 032092 69 TFKCHRD---G--SETCSVISFTSILAGDA--PKYSSFYKV-K--R--LHLFVK---SHVIVLFVQIHHTFATAG-SDGA 132 (147)
Q Consensus 69 ~~~~h~~---~--~~~~~v~~~~~~~~~~~--~~~~~~~~~-~--~--~~~~~~---~~~~~~fspdg~~latg~-~Dg~ 132 (147)
.+..... . ...+..+.-.+.++.+. ..+.++.-- . + ....+. ....++|+|||++|++++ .++.
T Consensus 250 ~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~ 329 (361)
T 3scy_A 250 TVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNV 329 (361)
T ss_dssp EEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTE
T ss_pred EEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCC
Confidence 2322211 1 12333444334455444 334443310 0 1 111222 234689999999887777 5789
Q ss_pred EEEe--ecCCceee
Q 032092 133 FNFW--DKDSKQRL 144 (147)
Q Consensus 133 i~iW--d~~~~~~~ 144 (147)
|.+| |.+++++.
T Consensus 330 v~v~~~d~~~g~~~ 343 (361)
T 3scy_A 330 IQIFERDQATGLLT 343 (361)
T ss_dssp EEEEEECTTTCCEE
T ss_pred EEEEEEECCCCcEe
Confidence 9995 55566654
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.14 E-value=4.4e-10 Score=83.83 Aligned_cols=103 Identities=16% Similarity=0.094 Sum_probs=69.4
Q ss_pred eEeecCCeEEEEECCCCccceeEecCCC-----CcceEEEEEccCCCEEEEEeeC------------CeEEEEeecCCCC
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINSPL-----KYQMRCVAAFPDQQGFWVGSIE------------GRVGVHHLDDSQQ 64 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~~~-----~~~i~~la~spdg~~l~~g~~d------------g~i~i~~~d~~~~ 64 (147)
+++..++.|.+||+.+++. ...+..+. ...+..++|+|||+++++++.+ +.|.+ ||+.++
T Consensus 59 v~~~~~~~i~~~d~~t~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~--~d~~~~ 135 (349)
T 1jmx_B 59 VLNNHYGDIYGIDLDTCKN-TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEV--FSTADG 135 (349)
T ss_dssp EEETTTTEEEEEETTTTEE-EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEE--EEGGGG
T ss_pred EEeCCCCcEEEEeCCCCcE-EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEE--EECCCc
Confidence 3455789999999998753 33333221 1236889999999999998876 89999 666553
Q ss_pred cc---eeEEEeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCc
Q 032092 65 SK---NFTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSK 141 (147)
Q Consensus 65 ~~---~~~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~ 141 (147)
+. ...+..+. .+.++ +|+|||+ ++.++. .|++||.+++
T Consensus 136 ~~~~~~~~~~~~~------~~~~~------------------------------~~s~dg~-l~~~~~--~i~~~d~~~~ 176 (349)
T 1jmx_B 136 LEAKPVRTFPMPR------QVYLM------------------------------RAADDGS-LYVAGP--DIYKMDVKTG 176 (349)
T ss_dssp GGBCCSEEEECCS------SCCCE------------------------------EECTTSC-EEEESS--SEEEECTTTC
T ss_pred cccceeeeccCCC------cccce------------------------------eECCCCc-EEEccC--cEEEEeCCCC
Confidence 32 22332221 24444 8999999 555544 4999999988
Q ss_pred eeeec
Q 032092 142 QRLKV 146 (147)
Q Consensus 142 ~~~~~ 146 (147)
+.+.+
T Consensus 177 ~~~~~ 181 (349)
T 1jmx_B 177 KYTVA 181 (349)
T ss_dssp CEEEE
T ss_pred ceecc
Confidence 76643
No 153
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.11 E-value=1.7e-10 Score=94.73 Aligned_cols=59 Identities=5% Similarity=-0.041 Sum_probs=41.6
Q ss_pred CCeEEEEECCCCccceeEecC--CCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEE
Q 032092 7 DRNLVVFNLQNPQTEFKRINS--PLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTF 70 (147)
Q Consensus 7 dg~v~iwdi~~~~~~~~~~~~--~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~ 70 (147)
++.|++||+.+++. ..+.. .+...+.+++|||||+.||.++. +.|++ ||..+++.....
T Consensus 90 ~~~i~~~d~~~~~~--~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~--~~~~~g~~~~~~ 150 (723)
T 1xfd_A 90 TGYYVLSKIPHGDP--QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYY--CAHVGKQAIRVV 150 (723)
T ss_dssp CSEEEEEESSSCCC--EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEE--ESSSSSCCEEEE
T ss_pred eeeEEEEECCCCce--EeccCCccccccccccEECCCCCEEEEEEC-CeEEE--EECCCCceEEEe
Confidence 47899999998853 22322 12223788999999999999876 78888 777666554333
No 154
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.11 E-value=5.5e-10 Score=91.67 Aligned_cols=106 Identities=13% Similarity=0.146 Sum_probs=70.6
Q ss_pred cCCeEEEEECCCCccceeEec-CCCCcceEEEEEccCCCEEEEEeeCC-----eEEEEeecCCCCcceeEEEeccCCceE
Q 032092 6 ADRNLVVFNLQNPQTEFKRIN-SPLKYQMRCVAAFPDQQGFWVGSIEG-----RVGVHHLDDSQQSKNFTFKCHRDGSET 79 (147)
Q Consensus 6 ~dg~v~iwdi~~~~~~~~~~~-~~~~~~i~~la~spdg~~l~~g~~dg-----~i~i~~~d~~~~~~~~~~~~h~~~~~~ 79 (147)
.+..|++||+.+++.. .... ..+...+.+++|+|||+.|++++.++ +|.+ ||..+++....+..+......
T Consensus 233 ~~~~l~~~d~~~~~~~-~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~--~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTV-YLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNA--YDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp CEEEEEEEETTTTEEE-ECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEE--EETTTCCEEEEEEEEECSSCC
T ss_pred CeeEEEEEECCCCceE-eeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEE--EECCCCceeeEEEEccCCCeE
Confidence 4468999999987531 1111 12334689999999999999988776 7777 787776333333221111000
Q ss_pred EeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEec--CCCeEEEeCCCCcEEEeecC-Cceee
Q 032092 80 CSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQ--IHHTFATAGSDGAFNFWDKD-SKQRL 144 (147)
Q Consensus 80 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fsp--dg~~latg~~Dg~i~iWd~~-~~~~~ 144 (147)
..+.++ +|+| ||+++++++.||.++||+.+ +++.+
T Consensus 310 ~~~~~~------------------------------~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~ 347 (706)
T 2z3z_A 310 EPLHPL------------------------------TFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLI 347 (706)
T ss_dssp CCCSCC------------------------------EECTTCSSEEEEEECTTSSCEEEEEETTSCEE
T ss_pred CccCCc------------------------------eeecCCCCEEEEEEccCCccEEEEEECCCCEE
Confidence 012344 9999 99999999999999999875 44443
No 155
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.06 E-value=1e-09 Score=90.49 Aligned_cols=59 Identities=8% Similarity=0.008 Sum_probs=41.7
Q ss_pred eEeecCCeEEEEECCCCc--cceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcc
Q 032092 2 VVGTADRNLVVFNLQNPQ--TEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSK 66 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~--~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~ 66 (147)
++++. +.|++||+.+++ .. ..+. .+...+.+++|||||++|+.++ ++.|.+ ||..+++.
T Consensus 124 ~~~~~-~~i~~~d~~~~~~~~~-~~l~-~~~~~~~~~~~SPDG~~la~~~-~~~i~~--~d~~~g~~ 184 (741)
T 2ecf_A 124 LFPLG-GELYLYDLKQEGKAAV-RQLT-HGEGFATDAKLSPKGGFVSFIR-GRNLWV--IDLASGRQ 184 (741)
T ss_dssp EEEET-TEEEEEESSSCSTTSC-CBCC-CSSSCEEEEEECTTSSEEEEEE-TTEEEE--EETTTTEE
T ss_pred EEEeC-CcEEEEECCCCCcceE-EEcc-cCCcccccccCCCCCCEEEEEe-CCcEEE--EecCCCCE
Confidence 44444 899999999872 22 2232 2335689999999999999887 568888 67665543
No 156
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.06 E-value=5.3e-10 Score=91.74 Aligned_cols=53 Identities=8% Similarity=-0.012 Sum_probs=39.6
Q ss_pred ecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCC
Q 032092 5 TADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQ 63 (147)
Q Consensus 5 s~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~ 63 (147)
+.++.|++||+.+++. .. +.. +...+.+++|||||+.|+.+ .|+.|++ ||+.+
T Consensus 98 ~~~~~i~~~d~~~~~~-~~-l~~-~~~~~~~~~~SpdG~~la~~-~~~~i~v--~~~~~ 150 (706)
T 2z3z_A 98 FTQGGLVGFDMLARKV-TY-LFD-TNEETASLDFSPVGDRVAYV-RNHNLYI--ARGGK 150 (706)
T ss_dssp EETTEEEEEETTTTEE-EE-EEC-CTTCCTTCEECTTSSEEEEE-ETTEEEE--EECBC
T ss_pred EECCEEEEEECCCCce-EE-ccC-CcccccCCcCCCCCCEEEEE-ECCeEEE--EecCc
Confidence 4679999999998742 22 222 23457889999999999984 7899999 66655
No 157
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.04 E-value=7.2e-09 Score=77.04 Aligned_cols=140 Identities=6% Similarity=-0.053 Sum_probs=88.0
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCC-ce-
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDG-SE- 78 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~-~~- 78 (147)
|++++.|+.|++||.++++.. -++..+....+.+++++|+|+.|+ +.++.|.. +|+ +++.+.++..+... ..
T Consensus 8 lv~~~~~~~v~~~d~~tG~~~-w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~--~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 8 LVGGSGWNKIAIINKDTKEIV-WEYPLEKGWECNSVAATKAGEILF--SYSKGAKM--ITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp EEECTTCSEEEEEETTTTEEE-EEEECCTTCCCCEEEECTTSCEEE--ECBSEEEE--ECT-TSCEEEEEECCTTCEEEE
T ss_pred EEeeCCCCEEEEEECCCCeEE-EEeCCCccCCCcCeEECCCCCEEE--eCCCCEEE--ECC-CCCEEEEEcCCCCccccc
Confidence 578899999999999999753 344322112578999999999888 44778888 888 78888888764221 11
Q ss_pred -EEeeccceeeeecC-CCcceeeeeeeeeeeee------ec----eEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 79 -TCSVISFTSILAGD-APKYSSFYKVKRLHLFV------KS----HVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 79 -~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~----~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
....+.-.+++.+. +..+..+..--+..+.+ .+ ...+++.|+|+++++...++.|..||.+ ++.+.+
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~ 160 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNS 160 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred cEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEE
Confidence 11112222233232 22222222111111111 11 1235788999999999999999999987 888876
Q ss_pred C
Q 032092 147 F 147 (147)
Q Consensus 147 ~ 147 (147)
|
T Consensus 161 ~ 161 (276)
T 3no2_A 161 V 161 (276)
T ss_dssp E
T ss_pred E
Confidence 4
No 158
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.03 E-value=1.2e-09 Score=82.22 Aligned_cols=108 Identities=7% Similarity=0.011 Sum_probs=65.1
Q ss_pred CCeEEEEECCCCcc-ceeEecCCCCcceEEEEEccCCCEEEEEe-eCCeEEEEeecCCCCcc--eeEEEeccCCceEEee
Q 032092 7 DRNLVVFNLQNPQT-EFKRINSPLKYQMRCVAAFPDQQGFWVGS-IEGRVGVHHLDDSQQSK--NFTFKCHRDGSETCSV 82 (147)
Q Consensus 7 dg~v~iwdi~~~~~-~~~~~~~~~~~~i~~la~spdg~~l~~g~-~dg~i~i~~~d~~~~~~--~~~~~~h~~~~~~~~v 82 (147)
++.|++||+.+++. .+.... .+...+..++|+|||++|++++ .+++|.+|+++. ++.. +..+. +.... +
T Consensus 62 ~~~v~~~~~~~g~~~~~~~~~-~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~-~g~~~~~~~~~-~~~~~---p- 134 (347)
T 3hfq_A 62 EGGIAAWQIDGQTAHKLNTVV-APGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAA-DGALTLTDTVQ-HSGHG---P- 134 (347)
T ss_dssp EEEEEEEEEETTEEEEEEEEE-EESCCCSEEEEETTTTEEEEEETTTTEEEEEEECT-TSCEEEEEEEE-CCCCC---S-
T ss_pred CceEEEEEecCCcEEEeeeee-cCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCC-CCCeeecceee-cCCCC---C-
Confidence 68999999976642 112211 1223578999999999888877 789999955543 2222 11111 11000 0
Q ss_pred ccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecC-Cce
Q 032092 83 ISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKD-SKQ 142 (147)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~-~~~ 142 (147)
... ........++|+|||++++++..++.|++||++ +++
T Consensus 135 ~~~---------------------~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~ 174 (347)
T 3hfq_A 135 RPE---------------------QDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQ 174 (347)
T ss_dssp STT---------------------CSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSC
T ss_pred Ccc---------------------ccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCc
Confidence 000 000001124999999988888889999999998 443
No 159
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.01 E-value=1.2e-09 Score=93.94 Aligned_cols=101 Identities=9% Similarity=-0.071 Sum_probs=74.1
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCC----------eEEEEeecCCCCcceeEE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEG----------RVGVHHLDDSQQSKNFTF 70 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg----------~i~i~~~d~~~~~~~~~~ 70 (147)
|++++.++.|++||+.+++. .... ..+...+.+++|||||++|++++.++ .|++ ||..+++ ...+
T Consensus 393 la~~~~~~~v~~~d~~tg~~-~~~~-~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l--~d~~~g~-~~~l 467 (1045)
T 1k32_A 393 AVVANDRFEIMTVDLETGKP-TVIE-RSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHV--YDMEGRK-IFAA 467 (1045)
T ss_dssp EEEEETTSEEEEEETTTCCE-EEEE-ECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEE--EETTTTE-EEEC
T ss_pred EEEECCCCeEEEEECCCCce-EEec-cCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEE--EECCCCc-EEEe
Confidence 46788999999999998853 2222 23445688999999999999888765 8888 6776554 4444
Q ss_pred EeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCc
Q 032092 71 KCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSK 141 (147)
Q Consensus 71 ~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~ 141 (147)
..|.. .+.+. +|+|||++|+.++.++...+|+....
T Consensus 468 ~~~~~-----~~~~~------------------------------~~spdG~~l~~~s~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 468 TTENS-----HDYAP------------------------------AFDADSKNLYYLSYRSLDPSPDRVVL 503 (1045)
T ss_dssp SCSSS-----BEEEE------------------------------EECTTSCEEEEEESCCCCCEECSSSS
T ss_pred eCCCc-----ccCCc------------------------------eEcCCCCEEEEEecccCCcCcchhcc
Confidence 44432 12233 99999999999999888888986543
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.98 E-value=1.2e-09 Score=89.85 Aligned_cols=53 Identities=6% Similarity=0.050 Sum_probs=39.5
Q ss_pred CCeEEEEECCCCccce-eEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcc
Q 032092 7 DRNLVVFNLQNPQTEF-KRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSK 66 (147)
Q Consensus 7 dg~v~iwdi~~~~~~~-~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~ 66 (147)
++.|++||+.+++... ..+ ...+.+++|||||+.||.+. ++.|++ ||..+++.
T Consensus 89 ~~~i~~~d~~~g~~~~~~~l----~~~~~~~~~SPDG~~la~~~-~~~i~~--~~~~~g~~ 142 (719)
T 1z68_A 89 TATYYIYDLSNGEFVRGNEL----PRPIQYLCWSPVGSKLAYVY-QNNIYL--KQRPGDPP 142 (719)
T ss_dssp EEEEEEEETTTTEECCSSCC----CSSBCCEEECSSTTCEEEEE-TTEEEE--ESSTTSCC
T ss_pred ceEEEEEECCCCccccceec----CcccccceECCCCCEEEEEE-CCeEEE--EeCCCCCc
Confidence 7899999999885310 112 13578999999999999885 789999 77765544
No 161
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.97 E-value=7.4e-09 Score=78.36 Aligned_cols=105 Identities=10% Similarity=0.092 Sum_probs=64.0
Q ss_pred ecCCeEEEEECCCCccce---eEecCC---------CCcceEEEEEccCCCEEEEEe-eCCeEEEEeecCCCC----c-c
Q 032092 5 TADRNLVVFNLQNPQTEF---KRINSP---------LKYQMRCVAAFPDQQGFWVGS-IEGRVGVHHLDDSQQ----S-K 66 (147)
Q Consensus 5 s~dg~v~iwdi~~~~~~~---~~~~~~---------~~~~i~~la~spdg~~l~~g~-~dg~i~i~~~d~~~~----~-~ 66 (147)
..++.|.+||+....... ...... ....+.+++|+|||+++++++ .++.|.+|+++...+ + .
T Consensus 117 ~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l 196 (361)
T 3scy_A 117 YSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKF 196 (361)
T ss_dssp TTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCC
T ss_pred CCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccce
Confidence 368899999997643211 111100 012357899999999765554 589999977776543 2 1
Q ss_pred ee-----EEEeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeC-CCCcEEEeecCC
Q 032092 67 NF-----TFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAG-SDGAFNFWDKDS 140 (147)
Q Consensus 67 ~~-----~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~-~Dg~i~iWd~~~ 140 (147)
.. ........ .+.. ++|+|||++++.++ .++.|.+||+++
T Consensus 197 ~~~~~~~~~~~~~~~----~~~~------------------------------~~~spdg~~l~v~~~~~~~v~v~~~~~ 242 (361)
T 3scy_A 197 LTKGTPEAFKVAPGS----GPRH------------------------------LIFNSDGKFAYLINEIGGTVIAFRYAD 242 (361)
T ss_dssp EEEEEEEEEECCTTC----CEEE------------------------------EEECTTSSEEEEEETTTCEEEEEEEET
T ss_pred eecccccceecCCCC----CCeE------------------------------EEEcCCCCEEEEEcCCCCeEEEEEecC
Confidence 11 11110000 1222 39999998776665 689999999987
Q ss_pred cee
Q 032092 141 KQR 143 (147)
Q Consensus 141 ~~~ 143 (147)
++.
T Consensus 243 g~~ 245 (361)
T 3scy_A 243 GML 245 (361)
T ss_dssp TEE
T ss_pred Cce
Confidence 643
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.97 E-value=1.7e-09 Score=90.02 Aligned_cols=98 Identities=12% Similarity=0.075 Sum_probs=66.2
Q ss_pred CCeEEEEECCCCccceeEecCCC--Ccce--EEEEEccCCCEEEEEeeC---------CeEEEEeecCCCCcceeEEEec
Q 032092 7 DRNLVVFNLQNPQTEFKRINSPL--KYQM--RCVAAFPDQQGFWVGSIE---------GRVGVHHLDDSQQSKNFTFKCH 73 (147)
Q Consensus 7 dg~v~iwdi~~~~~~~~~~~~~~--~~~i--~~la~spdg~~l~~g~~d---------g~i~i~~~d~~~~~~~~~~~~h 73 (147)
||+|++||+.+++. ...+.... ...+ .+++|||||++++.++.+ +.+.+ ||+.+++.. .+..|
T Consensus 35 ~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~--~d~~~~~~~-~l~~~ 110 (740)
T 4a5s_A 35 ENNILVFNAEYGNS-SVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI--YDLNKRQLI-TEERI 110 (740)
T ss_dssp TTEEEEEETTTCCE-EEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE--EETTTTEEC-CSSCC
T ss_pred CCcEEEEECCCCce-EEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEE--EECCCCcEE-EcccC
Confidence 89999999999864 22232211 1122 458999999999999887 44556 777665432 23322
Q ss_pred cCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceee
Q 032092 74 RDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRL 144 (147)
Q Consensus 74 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~ 144 (147)
.. .+.. ++|||||+.||.+ .|+.|++||+.+++..
T Consensus 111 ~~-----~~~~------------------------------~~~SPdG~~la~~-~~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 111 PN-----NTQW------------------------------VTWSPVGHKLAYV-WNNDIYVKIEPNLPSY 145 (740)
T ss_dssp CT-----TEEE------------------------------EEECSSTTCEEEE-ETTEEEEESSTTSCCE
T ss_pred CC-----ccee------------------------------eEECCCCCEEEEE-ECCeEEEEECCCCceE
Confidence 21 1222 3999999999988 5789999999876543
No 163
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.97 E-value=5.8e-09 Score=80.13 Aligned_cols=105 Identities=9% Similarity=-0.009 Sum_probs=74.5
Q ss_pred cCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEe----------eCCeEEEEeecCCCCcceeEEEeccC
Q 032092 6 ADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGS----------IEGRVGVHHLDDSQQSKNFTFKCHRD 75 (147)
Q Consensus 6 ~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~----------~dg~i~i~~~d~~~~~~~~~~~~h~~ 75 (147)
.|+.|.+||..+++. ..++.. ...+ .++|+|||+++++++ .+++|.+ ||..+++...++.....
T Consensus 29 ~d~~v~v~D~~t~~~-~~~i~~-g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v--~d~~t~~~~~~i~~~~~ 102 (361)
T 2oiz_A 29 TESRVHVYDYTNGKF-LGMVPT-AFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEV--WDADKLTFEKEISLPPK 102 (361)
T ss_dssp GGCEEEEEETTTCCE-EEEEEC-CEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEE--EETTTCCEEEEEEECTT
T ss_pred ccCeEEEEECCCCeE-EEEecC-CCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEE--EECcCCcEEEEEEcCcc
Confidence 478999999998863 444432 2233 899999999988876 3678999 78877777766653211
Q ss_pred Cc-eEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCC--CCcEEEeecCCceeeec
Q 032092 76 GS-ETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGS--DGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 76 ~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~--Dg~i~iWd~~~~~~~~~ 146 (147)
.. ....+..+ +|+|||++|+.+.. ++.|.+||+++++.+.+
T Consensus 103 ~~~~g~~p~~i------------------------------~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 103 RVQGLNYDGLF------------------------------RQTTDGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp BCCBCCCGGGE------------------------------EECTTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred ccccCCCcceE------------------------------EECCCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 00 00013444 99999999888763 68999999999887754
No 164
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.90 E-value=2e-08 Score=81.92 Aligned_cols=104 Identities=10% Similarity=0.056 Sum_probs=76.9
Q ss_pred eEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCC--CCcceeEEEeccCCceE
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDS--QQSKNFTFKCHRDGSET 79 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~--~~~~~~~~~~h~~~~~~ 79 (147)
++...++.|.++|..+++. +.++..+ ..+..++|||||+++.+++.|+.|.+ ||+. +++.+.++....
T Consensus 171 V~~~~~~~V~viD~~t~~v-~~~i~~g--~~p~~v~~SpDGr~lyv~~~dg~V~v--iD~~~~t~~~v~~i~~G~----- 240 (567)
T 1qks_A 171 VTLRDAGQIALIDGSTYEI-KTVLDTG--YAVHISRLSASGRYLFVIGRDGKVNM--IDLWMKEPTTVAEIKIGS----- 240 (567)
T ss_dssp EEETTTTEEEEEETTTCCE-EEEEECS--SCEEEEEECTTSCEEEEEETTSEEEE--EETTSSSCCEEEEEECCS-----
T ss_pred EEeCCCCeEEEEECCCCeE-EEEEeCC--CCccceEECCCCCEEEEEcCCCeEEE--EECCCCCCcEeEEEecCC-----
Confidence 4556789999999999853 4555432 34678999999999999999999999 7764 555555443211
Q ss_pred EeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEe----cCCCeEEEeCC-CCcEEEeecCCceeeec
Q 032092 80 CSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFV----QIHHTFATAGS-DGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 80 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs----pdg~~latg~~-Dg~i~iWd~~~~~~~~~ 146 (147)
.+..+ +|+ |||++++.++. ++.|.++|..+.+.+++
T Consensus 241 -~P~~i------------------------------a~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~ 281 (567)
T 1qks_A 241 -EARSI------------------------------ETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKI 281 (567)
T ss_dssp -EEEEE------------------------------EECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEE
T ss_pred -CCcee------------------------------EEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEE
Confidence 12233 999 79988877766 58999999999888764
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.90 E-value=2.5e-08 Score=76.05 Aligned_cols=61 Identities=15% Similarity=0.141 Sum_probs=42.6
Q ss_pred cCCeEEEEECC-CCccc-eeEecCC-CCcceEEEEEccCCCEEEEEee-CCeEEEEeecCCCCcc
Q 032092 6 ADRNLVVFNLQ-NPQTE-FKRINSP-LKYQMRCVAAFPDQQGFWVGSI-EGRVGVHHLDDSQQSK 66 (147)
Q Consensus 6 ~dg~v~iwdi~-~~~~~-~~~~~~~-~~~~i~~la~spdg~~l~~g~~-dg~i~i~~~d~~~~~~ 66 (147)
.++.|++||+. +++.. ...+..+ +...++.++|+|||+++++++. +++|.+|++|..+++.
T Consensus 165 ~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~ 229 (365)
T 1jof_A 165 TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMP 229 (365)
T ss_dssp TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcE
Confidence 46799999998 66421 1222211 1345899999999999877764 7899998888766654
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.88 E-value=3.4e-08 Score=75.32 Aligned_cols=102 Identities=7% Similarity=-0.030 Sum_probs=63.8
Q ss_pred cCCeEEEEECCC-CccceeEec---CCCCcceEEEEEccCCCEEEEEee-CCeEEEEeecCCCCcce--eEEEeccCCce
Q 032092 6 ADRNLVVFNLQN-PQTEFKRIN---SPLKYQMRCVAAFPDQQGFWVGSI-EGRVGVHHLDDSQQSKN--FTFKCHRDGSE 78 (147)
Q Consensus 6 ~dg~v~iwdi~~-~~~~~~~~~---~~~~~~i~~la~spdg~~l~~g~~-dg~i~i~~~d~~~~~~~--~~~~~h~~~~~ 78 (147)
.+|.+++|++.. ++. ...+. ......+.+++|+|||+++++++. +++|.+|+++. +++.. ..+......
T Consensus 117 ~~g~v~v~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~-~g~~~~~~~~~~~~~g-- 192 (365)
T 1jof_A 117 FAGYGNVFSVSETGKL-EKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLA-SGEVELVGSVDAPDPG-- 192 (365)
T ss_dssp SCCEEEEEEECTTCCE-EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT-TSCEEEEEEEECSSTT--
T ss_pred CCceEEEEccCCCCcC-cceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECC-CCCEEEeeeEecCCCC--
Confidence 689999999974 432 22221 112235889999999998887654 68999955542 44432 122110000
Q ss_pred EEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCC-CCcEEEeecC--Cce
Q 032092 79 TCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGS-DGAFNFWDKD--SKQ 142 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~-Dg~i~iWd~~--~~~ 142 (147)
..+..+ +|+|||++|+.++. ++.|.+|+.+ +++
T Consensus 193 -~~p~~~------------------------------~~spdg~~l~v~~~~~~~v~v~~~~~~~g~ 228 (365)
T 1jof_A 193 -DHPRWV------------------------------AMHPTGNYLYALMEAGNRICEYVIDPATHM 228 (365)
T ss_dssp -CCEEEE------------------------------EECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred -CCCCEe------------------------------EECCCCCEEEEEECCCCeEEEEEEeCCCCc
Confidence 013333 99999998877664 7899999764 454
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.86 E-value=5.1e-08 Score=74.82 Aligned_cols=103 Identities=12% Similarity=0.083 Sum_probs=70.4
Q ss_pred eecCCeEEEEECCCCccce-eEecCC------CC---cceEEEEEccCCCEEEEEee-----------CCeEEEEeecCC
Q 032092 4 GTADRNLVVFNLQNPQTEF-KRINSP------LK---YQMRCVAAFPDQQGFWVGSI-----------EGRVGVHHLDDS 62 (147)
Q Consensus 4 gs~dg~v~iwdi~~~~~~~-~~~~~~------~~---~~i~~la~spdg~~l~~g~~-----------dg~i~i~~~d~~ 62 (147)
.+.++.|.++|+...+..+ ..+... .. ...+-++|+||++.+.+... .++|.+ ||+.
T Consensus 217 ~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~v--iD~~ 294 (361)
T 2oiz_A 217 VSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWV--MDTK 294 (361)
T ss_dssp EBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEE--EETT
T ss_pred EeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEE--EECC
Confidence 4567889999997653211 111100 00 01223799999887766543 346777 8888
Q ss_pred CCcceeEEEeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCc-
Q 032092 63 QQSKNFTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSK- 141 (147)
Q Consensus 63 ~~~~~~~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~- 141 (147)
+++.+.++..+. +.++ +|+|||++|++++. ++|.+||.+++
T Consensus 295 t~~~v~~i~~~~-------p~~i------------------------------a~spdg~~l~v~n~-~~v~v~D~~t~~ 336 (361)
T 2oiz_A 295 TKQRVARIPGRD-------ALSM------------------------------TIDQQRNLMLTLDG-GNVNVYDISQPE 336 (361)
T ss_dssp TTEEEEEEECTT-------CCEE------------------------------EEETTTTEEEEECS-SCEEEEECSSSS
T ss_pred CCcEEEEEecCC-------eeEE------------------------------EECCCCCEEEEeCC-CeEEEEECCCCc
Confidence 888877776543 3455 99999999998886 99999999999
Q ss_pred -eeeec
Q 032092 142 -QRLKV 146 (147)
Q Consensus 142 -~~~~~ 146 (147)
+.+.+
T Consensus 337 l~~~~~ 342 (361)
T 2oiz_A 337 PKLLRT 342 (361)
T ss_dssp CEEEEE
T ss_pred ceeeEE
Confidence 88764
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.80 E-value=3.2e-08 Score=80.58 Aligned_cols=97 Identities=8% Similarity=0.025 Sum_probs=62.9
Q ss_pred CeEEEEECCC------CccceeEecCCCCcceEEEEEccCCCEEEEEeeCC--------eEEEEeecCC-CCc--ceeEE
Q 032092 8 RNLVVFNLQN------PQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEG--------RVGVHHLDDS-QQS--KNFTF 70 (147)
Q Consensus 8 g~v~iwdi~~------~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg--------~i~i~~~d~~-~~~--~~~~~ 70 (147)
..|++||+.+ ++ + ..+...+...+..++|||||++|+.++.++ .|.+ ||+. +++ ....+
T Consensus 161 ~~i~~~~~~~~~~~~~~~-~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~--~d~~~~g~~~~~~~l 236 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSA-V-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKT--ARVTEDGRFADTRTL 236 (662)
T ss_dssp EEEEEEETTSTTTTCGGG-S-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEE--EEECTTSCEEEEEEE
T ss_pred eEEEEEECCCCccccCCc-e-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEE--EEECCCCcccccEEe
Confidence 5899999988 43 2 333302223577899999999999888664 5776 6665 341 22233
Q ss_pred Ee-ccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCC--cEEEeecCCcee
Q 032092 71 KC-HRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDG--AFNFWDKDSKQR 143 (147)
Q Consensus 71 ~~-h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg--~i~iWd~~~~~~ 143 (147)
.. |.. .+... +|+|||+++++++.|+ .|.+||..+++.
T Consensus 237 ~~~~~~-----~~~~~------------------------------~~spdg~l~~~~~~~~~~~l~~~~~~~~~~ 277 (662)
T 3azo_A 237 LGGPEE-----AIAQA------------------------------EWAPDGSLIVATDRTGWWNLHRVDPATGAA 277 (662)
T ss_dssp EEETTB-----CEEEE------------------------------EECTTSCEEEEECTTSSCEEEEECTTTCCE
T ss_pred CCCCCc-----eEcce------------------------------EECCCCeEEEEECCCCCeEEEEEECCCCce
Confidence 22 221 12333 9999999888888888 677777656543
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.80 E-value=1.1e-07 Score=69.66 Aligned_cols=103 Identities=6% Similarity=0.057 Sum_probs=70.1
Q ss_pred eEeecCCeEEEEECCCCccceeEecCC-CCcceEEEEEccCCCEEEEEeeCC-eEEEEeecCCCCcceeEEEeccCCceE
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINSP-LKYQMRCVAAFPDQQGFWVGSIEG-RVGVHHLDDSQQSKNFTFKCHRDGSET 79 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~~-~~~~i~~la~spdg~~l~~g~~dg-~i~i~~~d~~~~~~~~~~~~h~~~~~~ 79 (147)
++.+.++.|++||.... . +..+... ....+..|+++|+|+.+++...++ .|.+ ||. +++.+.++..+....
T Consensus 179 v~~~~~~~i~~~~~~g~-~-~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~--~~~-~g~~~~~~~~~~~~~-- 251 (286)
T 1q7f_A 179 ISDNRAHCVKVFNYEGQ-Y-LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTI--FTQ-DGQLISALESKVKHA-- 251 (286)
T ss_dssp EEEGGGTEEEEEETTCC-E-EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEE--ECT-TSCEEEEEEESSCCS--
T ss_pred EEECCCCEEEEEcCCCC-E-EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEE--ECC-CCCEEEEEcccCCCC--
Confidence 34456889999998543 2 3334321 113578999999999888888776 9999 775 456666665443210
Q ss_pred EeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCcee
Q 032092 80 CSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQR 143 (147)
Q Consensus 80 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~ 143 (147)
.+.++ +++|+|+++++ +.|+.|++|+......
T Consensus 252 -~~~~i------------------------------~~~~~g~l~vs-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 252 -QCFDV------------------------------ALMDDGSVVLA-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp -CEEEE------------------------------EEETTTEEEEE-ETTTEEEEEECSCCCC
T ss_pred -cceeE------------------------------EECCCCcEEEE-CCCCeEEEEEcccccc
Confidence 12233 99999998888 4699999999876543
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.77 E-value=2e-07 Score=70.21 Aligned_cols=117 Identities=12% Similarity=0.066 Sum_probs=74.0
Q ss_pred eEeecCCeEEEEECCCCccceeEecC--------CCCcceEEEEEcc-CCCEEEEEe-eCCeEEEEeecCCCCcceeEEE
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINS--------PLKYQMRCVAAFP-DQQGFWVGS-IEGRVGVHHLDDSQQSKNFTFK 71 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~--------~~~~~i~~la~sp-dg~~l~~g~-~dg~i~i~~~d~~~~~~~~~~~ 71 (147)
++...++.|++||.......+..+.. ..-.....|+++| +|+.+++.+ .+++|++ ||. +++.+..+.
T Consensus 106 v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~--~~~-~g~~~~~~~ 182 (329)
T 3fvz_A 106 VTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQ--FSP-SGKFVTQWG 182 (329)
T ss_dssp EEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEE--ECT-TSCEEEEEC
T ss_pred EEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEE--EcC-CCCEEEEec
Confidence 45566789999998654222333321 1112478999999 788888886 6999999 773 466655553
Q ss_pred eccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecC-CCeEEEeCCCCcEEEeecCCceeeec
Q 032092 72 CHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQI-HHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 72 ~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspd-g~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
....... ... ..+.....++++|+ |+++++...++.|++||.++++.+.+
T Consensus 183 ~~g~~~~---~~~----------------------~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~ 233 (329)
T 3fvz_A 183 EESSGSS---PRP----------------------GQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVRE 233 (329)
T ss_dssp EECCSSS---CCT----------------------TEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred cCCCCCC---CCC----------------------cccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 2211000 000 00111123499999 78889988999999999987877654
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.76 E-value=2.4e-08 Score=75.79 Aligned_cols=96 Identities=9% Similarity=-0.006 Sum_probs=64.7
Q ss_pred EEECCCCccceeEecCCCCcceEE-----EEEccCCCEEEEEee-CCeEEEEeecCCCCcceeEEEeccCCceEEeeccc
Q 032092 12 VFNLQNPQTEFKRINSPLKYQMRC-----VAAFPDQQGFWVGSI-EGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVISF 85 (147)
Q Consensus 12 iwdi~~~~~~~~~~~~~~~~~i~~-----la~spdg~~l~~g~~-dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~~ 85 (147)
..|..++.. ...+.. +...... .+|||||++|+.++. +|...||.+|+.+++......++.. .+...
T Consensus 14 ~~~~~~g~~-~~~lt~-~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~-----~~~~~ 86 (388)
T 3pe7_A 14 YQDASTGAQ-VTRLTP-PDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGD-----NTFGG 86 (388)
T ss_dssp EECTTTCCE-EEECSC-TTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCB-----CSSSC
T ss_pred EecCCCCcc-eEEecC-CcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCC-----Cccce
Confidence 456666653 333332 2222333 789999999998887 7865666688876655433322221 12244
Q ss_pred eeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceee
Q 032092 86 TSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRL 144 (147)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~ 144 (147)
+|+|||+.|+.++.++.|++||+.+++..
T Consensus 87 ------------------------------~~spdg~~l~~~~~~~~l~~~d~~~g~~~ 115 (388)
T 3pe7_A 87 ------------------------------FLSPDDDALFYVKDGRNLMRVDLATLEEN 115 (388)
T ss_dssp ------------------------------EECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred ------------------------------EEcCCCCEEEEEeCCCeEEEEECCCCcce
Confidence 99999999999999999999999987643
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.76 E-value=7.9e-08 Score=71.98 Aligned_cols=93 Identities=15% Similarity=0.148 Sum_probs=64.6
Q ss_pred CCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeC---CeEEEEeecCCCCcceeEEEeccCCceEEeec
Q 032092 7 DRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIE---GRVGVHHLDDSQQSKNFTFKCHRDGSETCSVI 83 (147)
Q Consensus 7 dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~d---g~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~ 83 (147)
++.|.+||+.+++. ..+ ..+..++|||||+.|+..+.+ +...||.+|+.+++...... +. . +.
T Consensus 42 ~~~l~~~d~~~~~~--~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~-~~-----~-~~ 107 (347)
T 2gop_A 42 ENTIVIENLKNNAR--RFI-----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILE-AK-----N-IR 107 (347)
T ss_dssp EEEEEEEETTTCCE--EEE-----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE-ES-----E-EE
T ss_pred cceEEEEeCCCCce--EEc-----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEc-CC-----C-cc
Confidence 67899999998752 233 247889999999999987765 56566668876554332221 11 0 23
Q ss_pred cceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCC---------------------------CcEEEe
Q 032092 84 SFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSD---------------------------GAFNFW 136 (147)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~D---------------------------g~i~iW 136 (147)
.. +|+|||+.|+.++.+ ..|++|
T Consensus 108 ~~------------------------------~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 157 (347)
T 2gop_A 108 SL------------------------------EWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIF 157 (347)
T ss_dssp EE------------------------------EECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEE
T ss_pred ce------------------------------eECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEE
Confidence 33 999999988887642 579999
Q ss_pred ecCCcee
Q 032092 137 DKDSKQR 143 (147)
Q Consensus 137 d~~~~~~ 143 (147)
|+.+++.
T Consensus 158 d~~~~~~ 164 (347)
T 2gop_A 158 DTESEEV 164 (347)
T ss_dssp ETTTTEE
T ss_pred ECCCCeE
Confidence 9988765
No 173
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.70 E-value=1e-06 Score=66.44 Aligned_cols=137 Identities=7% Similarity=0.015 Sum_probs=84.7
Q ss_pred EeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEecc-------C
Q 032092 3 VGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHR-------D 75 (147)
Q Consensus 3 ~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~-------~ 75 (147)
+...++.|.+||..+++. ..++.. ......|+++|+++.+++...++.|.+ +|+.+++...++.... .
T Consensus 59 ~~~~~~~v~viD~~t~~~-~~~i~~--~~~p~~i~~~~~g~lyv~~~~~~~v~~--iD~~t~~~~~~i~~g~~~~~~~~p 133 (328)
T 3dsm_A 59 VVNNSHVIFAIDINTFKE-VGRITG--FTSPRYIHFLSDEKAYVTQIWDYRIFI--INPKTYEITGYIECPDMDMESGST 133 (328)
T ss_dssp EEGGGTEEEEEETTTCCE-EEEEEC--CSSEEEEEEEETTEEEEEEBSCSEEEE--EETTTTEEEEEEECTTCCTTTCBC
T ss_pred EEcCCCEEEEEECcccEE-EEEcCC--CCCCcEEEEeCCCeEEEEECCCCeEEE--EECCCCeEEEEEEcCCccccCCCc
Confidence 445678999999999864 445532 235789999999965555547899999 8888777666665322 1
Q ss_pred CceEEeeccceeeeec--CCCcceeeeee-eeeeee---eeceEEEEEecCCCeEEEeCCC----------CcEEEeecC
Q 032092 76 GSETCSVISFTSILAG--DAPKYSSFYKV-KRLHLF---VKSHVIVLFVQIHHTFATAGSD----------GAFNFWDKD 139 (147)
Q Consensus 76 ~~~~~~v~~~~~~~~~--~~~~~~~~~~~-~~~~~~---~~~~~~~~fspdg~~latg~~D----------g~i~iWd~~ 139 (147)
..... ..-.+..+. .+..+.++..- .+.... ......++++|+|++++++..+ +.|.++|.+
T Consensus 134 ~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~ 211 (328)
T 3dsm_A 134 EQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE 211 (328)
T ss_dssp CCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT
T ss_pred ceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECC
Confidence 11222 222233332 23344433311 111111 1223467999999988887765 789999999
Q ss_pred Cceeeec
Q 032092 140 SKQRLKV 146 (147)
Q Consensus 140 ~~~~~~~ 146 (147)
+++.+.+
T Consensus 212 t~~v~~~ 218 (328)
T 3dsm_A 212 TFTVEKQ 218 (328)
T ss_dssp TTEEEEE
T ss_pred CCeEEEE
Confidence 8877643
No 174
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.68 E-value=2.2e-06 Score=63.10 Aligned_cols=134 Identities=5% Similarity=-0.129 Sum_probs=77.6
Q ss_pred eEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCC-----
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDG----- 76 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~----- 76 (147)
+++..++.|+.||..++ . ..+..+ ...+.+|+++|+|+.+++...++.|.+ ||..+++...........
T Consensus 44 ~~~~~~~~i~~~~~~~~-~--~~~~~~-~~~~~~l~~~~dg~l~v~~~~~~~i~~--~d~~~g~~~~~~~~~~~~~~~~~ 117 (296)
T 3e5z_A 44 FSDVRQNRTWAWSDDGQ-L--SPEMHP-SHHQNGHCLNKQGHLIACSHGLRRLER--QREPGGEWESIADSFEGKKLNSP 117 (296)
T ss_dssp EEEGGGTEEEEEETTSC-E--EEEESS-CSSEEEEEECTTCCEEEEETTTTEEEE--ECSTTCCEEEEECEETTEECCCC
T ss_pred EEeCCCCEEEEEECCCC-e--EEEECC-CCCcceeeECCCCcEEEEecCCCeEEE--EcCCCCcEEEEeeccCCCCCCCC
Confidence 56778899999999876 2 333322 245889999999998887777789988 787666543222111110
Q ss_pred -ceEEeeccceeeee----cC-----------C---Ccceeeeeeeeeee---eeeceEEEEEecCCCeEEEeCCCCcEE
Q 032092 77 -SETCSVISFTSILA----GD-----------A---PKYSSFYKVKRLHL---FVKSHVIVLFVQIHHTFATAGSDGAFN 134 (147)
Q Consensus 77 -~~~~~v~~~~~~~~----~~-----------~---~~~~~~~~~~~~~~---~~~~~~~~~fspdg~~latg~~Dg~i~ 134 (147)
......... +..+ |. + ..+..+..-.+... .+.....++|+|||+.|++.+.++.|+
T Consensus 118 ~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~ 196 (296)
T 3e5z_A 118 NDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATH 196 (296)
T ss_dssp CCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEE
T ss_pred CCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEE
Confidence 011111111 1121 11 0 01111111011111 112235789999999888888899999
Q ss_pred EeecC-Cce
Q 032092 135 FWDKD-SKQ 142 (147)
Q Consensus 135 iWd~~-~~~ 142 (147)
+||+. +++
T Consensus 197 ~~~~~~~g~ 205 (296)
T 3e5z_A 197 RYCLNARGE 205 (296)
T ss_dssp EEEECSSSC
T ss_pred EEEECCCCc
Confidence 99986 444
No 175
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.67 E-value=1.5e-07 Score=73.55 Aligned_cols=94 Identities=13% Similarity=0.133 Sum_probs=65.2
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETC 80 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~ 80 (147)
|+++ .++.|++||+++..+. .... .++.++.++.+.+. .+++++.||.+.+ ||..++.... +. -
T Consensus 100 L~v~-~~~~l~v~dv~sl~~~-~~~~-~~~~~v~~i~~~~p--~~av~~~dG~L~v--~dl~~~~~~~----~~-----~ 163 (388)
T 1xip_A 100 VLVS-TRNALYSLDLEELSEF-RTVT-SFEKPVFQLKNVNN--TLVILNSVNDLSA--LDLRTKSTKQ----LA-----Q 163 (388)
T ss_dssp EEEE-ESSEEEEEESSSTTCE-EEEE-ECSSCEEEEEECSS--EEEEEETTSEEEE--EETTTCCEEE----EE-----E
T ss_pred EEEE-cCCcEEEEEchhhhcc-Cccc-eeecceeeEEecCC--CEEEEECCCCEEE--EEccCCcccc----cc-----C
Confidence 4566 8899999999986532 2221 23345777766543 4999999999999 6665444321 11 1
Q ss_pred eeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCce
Q 032092 81 SVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQ 142 (147)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~ 142 (147)
.+.++ +|||+| ++.|..||++++|+...++
T Consensus 164 ~Vs~v------------------------------~WSpkG--~~vg~~dg~i~~~~~~~~~ 193 (388)
T 1xip_A 164 NVTSF------------------------------DVTNSQ--LAVLLKDRSFQSFAWRNGE 193 (388)
T ss_dssp SEEEE------------------------------EECSSE--EEEEETTSCEEEEEEETTE
T ss_pred CceEE------------------------------EEcCCc--eEEEEcCCcEEEEcCCCcc
Confidence 24555 999999 6778899999999887655
No 176
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.65 E-value=3.1e-09 Score=82.03 Aligned_cols=140 Identities=9% Similarity=0.042 Sum_probs=66.1
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCc-eE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGS-ET 79 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~-~~ 79 (147)
|++|+.||.|+.||.++++.. -+... .++.+..+.++++.+++++.||.++. ||..+++.+..+..+.... ..
T Consensus 12 v~~gs~dg~v~a~d~~tG~~~-W~~~~---~~~~s~p~~~~g~~~v~~s~dg~l~a--~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 12 LFVSTLDGSLHAVSKRTGSIK-WTLKE---DPVLQVPTHVEEPAFLPDPNDGSLYT--LGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp EEEEETTSEEEEEETTTCCEE-EEEEC---CCSCCCC-----CCEEECTTTCCEEE--C-----CCSEECSCCHHHHHTT
T ss_pred EEEEcCCCEEEEEECCCCCEE-EEecC---CCceecceEcCCCEEEEeCCCCEEEE--EECCCCceeeeeeccCcccccc
Confidence 468899999999999999753 22322 23455556677888888899999999 8887777765553321100 00
Q ss_pred Eeec-cceeeeecCCC-cceeeeee-eeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 80 CSVI-SFTSILAGDAP-KYSSFYKV-KRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 80 ~~v~-~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.++. .-..+..|+.+ .+..+... -+..+.+..+....++|++..++.++.|+.|+.||.++++.+.+
T Consensus 86 sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~ 155 (369)
T 2hz6_A 86 SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFADSLSPSTSLLYLGRTEYTITMYDTKTRELRWN 155 (369)
T ss_dssp CSCC-----CCCCEEEEEEEEECCC----------------------EEEEEEEEEEECCCSSSSSCCCE
T ss_pred CceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCcccccccCCEEEEEecCCEEEEEECCCCCEEEe
Confidence 0111 11122223222 22222211 12233333333456788888999999999999999999987654
No 177
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.65 E-value=3.9e-07 Score=66.65 Aligned_cols=104 Identities=9% Similarity=0.004 Sum_probs=68.0
Q ss_pred EeecCCeEEEEECCCCccceeEecC-CCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEEe
Q 032092 3 VGTADRNLVVFNLQNPQTEFKRINS-PLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCS 81 (147)
Q Consensus 3 ~gs~dg~v~iwdi~~~~~~~~~~~~-~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~ 81 (147)
+...++.|++||... + ....+.. .....++.|+++|+|+.+++...++.|.+ ||.. ++.+.++..+... ..
T Consensus 137 ~~~~~~~i~~~~~~g-~-~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~--~~~~-g~~~~~~~~~g~~---~~ 208 (286)
T 1q7f_A 137 VECKVMRVIIFDQNG-N-VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKV--FNYE-GQYLRQIGGEGIT---NY 208 (286)
T ss_dssp EETTTTEEEEECTTS-C-EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEE--EETT-CCEEEEESCTTTS---CS
T ss_pred EECCCCEEEEEcCCC-C-EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEE--EcCC-CCEEEEEccCCcc---CC
Confidence 445678999999653 3 2333322 12234789999999998888888999999 6653 4444444322100 01
Q ss_pred eccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCC-cEEEeecCCceeee
Q 032092 82 VISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDG-AFNFWDKDSKQRLK 145 (147)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg-~i~iWd~~~~~~~~ 145 (147)
+..+ +++|+|+++++...++ .|.+||. +++.+.
T Consensus 209 p~~i------------------------------~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~ 242 (286)
T 1q7f_A 209 PIGV------------------------------GINSNGEILIADNHNNFNLTIFTQ-DGQLIS 242 (286)
T ss_dssp EEEE------------------------------EECTTCCEEEEECSSSCEEEEECT-TSCEEE
T ss_pred CcEE------------------------------EECCCCCEEEEeCCCCEEEEEECC-CCCEEE
Confidence 2333 8999999888888776 9999995 444443
No 178
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.63 E-value=4.9e-07 Score=70.62 Aligned_cols=104 Identities=11% Similarity=-0.090 Sum_probs=73.0
Q ss_pred CCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEe----------eCCeEEEEeecCCCCcceeEEEecc-C
Q 032092 7 DRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGS----------IEGRVGVHHLDDSQQSKNFTFKCHR-D 75 (147)
Q Consensus 7 dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~----------~dg~i~i~~~d~~~~~~~~~~~~h~-~ 75 (147)
++.|.++|..+++. +.++... ..+ . +++||||+++.+++ .++.|.+ ||..+++...++.... .
T Consensus 58 ~~~V~ViD~~t~~v-~~~I~vG-~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsv--iD~~t~~v~~~I~v~~g~ 131 (386)
T 3sjl_D 58 VTQQFVIDGEAGRV-IGMIDGG-FLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEV--FDPVTLLPTADIELPDAP 131 (386)
T ss_dssp SEEEEEEETTTTEE-EEEEEEC-SSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEE--ECTTTCCEEEEEEETTCC
T ss_pred CCEEEEEECCCCeE-EEEEECC-CCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEE--EECCCCeEEEEEECCCcc
Confidence 67999999999863 4555432 234 4 99999999887765 3678998 8988887776664211 0
Q ss_pred Cc-eEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCC--CCcEEEeecCCceeeec
Q 032092 76 GS-ETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGS--DGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 76 ~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~--Dg~i~iWd~~~~~~~~~ 146 (147)
.. ..-.+..+ +|+|||+++..+.. ++.|.++|+.+++.+.+
T Consensus 132 r~~~g~~P~~~------------------------------a~spDGk~lyVan~~~~~~VsVID~~t~~vv~t 175 (386)
T 3sjl_D 132 RFLVGTYPWMT------------------------------SLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRM 175 (386)
T ss_dssp CCCBSCCGGGE------------------------------EECTTSSEEEEEECSSSCEEEEEETTTTEEEEE
T ss_pred ccccCCCCceE------------------------------EEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEE
Confidence 00 00013344 99999998777653 68999999999998765
No 179
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.60 E-value=5e-07 Score=68.46 Aligned_cols=66 Identities=14% Similarity=0.153 Sum_probs=44.9
Q ss_pred eEeec-CC--eEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEE
Q 032092 2 VVGTA-DR--NLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFK 71 (147)
Q Consensus 2 ~~gs~-dg--~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~ 71 (147)
+.++. +| .|.+||+.+++. ..+...+...+..++|+|||+.|+.++.++.+++ ||+.+++....+.
T Consensus 51 ~~~~~~~g~~~l~~~d~~~g~~--~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~--~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 51 LFGGAFDGPWNYYLLDLNTQVA--TQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMR--VDLATLEENVVYQ 119 (388)
T ss_dssp EEEECTTSSCEEEEEETTTCEE--EECCCSSCBCSSSCEECTTSSEEEEEETTTEEEE--EETTTCCEEEEEE
T ss_pred EEEEcCCCCceEEEEeCCCCce--EEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEE--EECCCCcceeeee
Confidence 44555 56 488889998753 2333223333446789999999999999999988 7777665544443
No 180
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.59 E-value=1.1e-07 Score=71.57 Aligned_cols=105 Identities=10% Similarity=0.060 Sum_probs=69.7
Q ss_pred eEeecCCeEEEEECCCCccceeEecC-CCCcceEEEEEcc------CCCEEEEEeeCCeEEEEeecCCCCcceeEEEecc
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINS-PLKYQMRCVAAFP------DQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHR 74 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~-~~~~~i~~la~sp------dg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~ 74 (147)
++...++.|++||..+++. ...+.. .....+.+++++| +|+.+++...+++|.+ ||..+++.+.++....
T Consensus 212 v~d~~~~~I~~~~~~~G~~-~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~--~~~~~g~~~~~~~~~~ 288 (329)
T 3fvz_A 212 VADRENGRIQCFKTDTKEF-VREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFV--MNFSSGEIIDVFKPVR 288 (329)
T ss_dssp EEETTTTEEEEEETTTCCE-EEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEE--EETTTCCEEEEECCSS
T ss_pred EEECCCCEEEEEECCCCcE-EEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEE--EEcCCCeEEEEEcCCC
Confidence 4456788999999987753 344432 2234578999999 4444444455568888 7777777766653110
Q ss_pred CCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCc
Q 032092 75 DGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSK 141 (147)
Q Consensus 75 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~ 141 (147)
. ....+..+ +++|+|+++++...++.|++|+.+..
T Consensus 289 ~--~~~~p~~i------------------------------a~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 289 K--HFDMPHDI------------------------------VASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp S--CCSSEEEE------------------------------EECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred C--ccCCeeEE------------------------------EECCCCCEEEEECCCCEEEEEeCCcc
Confidence 0 00013344 99999999999999999999998643
No 181
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.58 E-value=2.2e-07 Score=75.67 Aligned_cols=95 Identities=8% Similarity=0.001 Sum_probs=61.6
Q ss_pred CCeEEEEECC--C-CccceeEecCC----CCcceEEEEEccCCCEEEEEeeC----------CeEEEEeecCCC------
Q 032092 7 DRNLVVFNLQ--N-PQTEFKRINSP----LKYQMRCVAAFPDQQGFWVGSIE----------GRVGVHHLDDSQ------ 63 (147)
Q Consensus 7 dg~v~iwdi~--~-~~~~~~~~~~~----~~~~i~~la~spdg~~l~~g~~d----------g~i~i~~~d~~~------ 63 (147)
+..|.++|+. . ++ + ..+... +...+.+++|||||+.|++++.+ .+|.+ ||+.+
T Consensus 101 ~~~l~~~~~~~~g~~~-~-~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~ 176 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAV-P-RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAA--VPLDGSAAADR 176 (662)
T ss_dssp TCCEEEECTTSTTCCC-C-EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEE--EETTSTTTTCG
T ss_pred CCeEEEEcCCCCCCCC-C-EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEE--EECCCCccccC
Confidence 4566777765 2 32 2 233221 33467899999999999998876 46766 77654
Q ss_pred CcceeEEE-eccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCC--------cEE
Q 032092 64 QSKNFTFK-CHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDG--------AFN 134 (147)
Q Consensus 64 ~~~~~~~~-~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg--------~i~ 134 (147)
++. ..+. .+.. .+... +|||||++||.++.|+ .|+
T Consensus 177 ~~~-~~l~~~~~~-----~~~~~------------------------------~~SpDG~~la~~~~~~~~~~~~~~~i~ 220 (662)
T 3azo_A 177 SAV-RELSDDAHR-----FVTGP------------------------------RLSPDGRQAVWLAWDHPRMPWEGTELK 220 (662)
T ss_dssp GGS-EESSCSCSS-----EECCC------------------------------EECTTSSEEEEEEECTTCCTTTCEEEE
T ss_pred Cce-eEEEecCCC-----cccCc------------------------------eECCCCCEEEEEECCCCCCCCCCcEEE
Confidence 332 2332 2221 23444 9999999998877553 799
Q ss_pred EeecC-Cc
Q 032092 135 FWDKD-SK 141 (147)
Q Consensus 135 iWd~~-~~ 141 (147)
+||++ ++
T Consensus 221 ~~d~~~~g 228 (662)
T 3azo_A 221 TARVTEDG 228 (662)
T ss_dssp EEEECTTS
T ss_pred EEEECCCC
Confidence 99998 55
No 182
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.55 E-value=8.2e-08 Score=79.81 Aligned_cols=78 Identities=8% Similarity=0.097 Sum_probs=57.5
Q ss_pred eEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeece
Q 032092 33 MRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSH 112 (147)
Q Consensus 33 i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (147)
..+++|+|||++++++ ||+|++ ||..+++....+.+|.........++.
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 67 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILV--FNAEYGNSSVFLENSTFDEFGHSINDY--------------------------- 67 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEE--EETTTCCEEEEECTTTTTTCCSCCCEE---------------------------
T ss_pred ccccEECCCCcEEEEc--CCcEEE--EECCCCceEEEEechhhhhhcccccce---------------------------
Confidence 5689999999888886 999999 777777766666666532110001123
Q ss_pred EEEEEecCCCeEEEeCCC---------CcEEEeecCCceee
Q 032092 113 VIVLFVQIHHTFATAGSD---------GAFNFWDKDSKQRL 144 (147)
Q Consensus 113 ~~~~fspdg~~latg~~D---------g~i~iWd~~~~~~~ 144 (147)
+|||||++|+.++.+ +.+.+||++++++.
T Consensus 68 ---~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~ 105 (740)
T 4a5s_A 68 ---SISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI 105 (740)
T ss_dssp ---EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC
T ss_pred ---EECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE
Confidence 899999999998876 56679999988754
No 183
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.50 E-value=1.8e-07 Score=77.21 Aligned_cols=100 Identities=10% Similarity=0.075 Sum_probs=62.2
Q ss_pred eecCCeEEEEECCCCccc-eeEecCCCCcceEEEEEccCCCEEEEEeeCCe-------------EEEEeecCCCCcce--
Q 032092 4 GTADRNLVVFNLQNPQTE-FKRINSPLKYQMRCVAAFPDQQGFWVGSIEGR-------------VGVHHLDDSQQSKN-- 67 (147)
Q Consensus 4 gs~dg~v~iwdi~~~~~~-~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~-------------i~i~~~d~~~~~~~-- 67 (147)
|+++..|++||+.+++.. ...+. . ....+++|+|||+.|+.++.|.. |++ |++.++...
T Consensus 143 G~~~~~i~v~dl~tg~~~~~~~~~-~--~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~--~~l~t~~~~~~ 217 (695)
T 2bkl_A 143 AADEAVLHVIDVDSGEWSKVDVIE-G--GKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRY--HTLGTEPSKDT 217 (695)
T ss_dssp TCSCCEEEEEETTTCCBCSSCCBS-C--CTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEE--EETTSCGGGCE
T ss_pred CCceEEEEEEECCCCCCcCCcccC-c--ccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEE--EECCCCchhce
Confidence 445679999999998632 11111 1 11268999999999999988776 777 666544421
Q ss_pred eEEEeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCC----cEEEeecCCc
Q 032092 68 FTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDG----AFNFWDKDSK 141 (147)
Q Consensus 68 ~~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg----~i~iWd~~~~ 141 (147)
..+....... .+.+ ++|||||++|+.++.++ .|++||..++
T Consensus 218 lv~~~~~~~~---~~~~------------------------------~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~ 262 (695)
T 2bkl_A 218 VVHERTGDPT---TFLQ------------------------------SDLSRDGKYLFVYILRGWSENDVYWKRPGEK 262 (695)
T ss_dssp EEECCCCCTT---CEEE------------------------------EEECTTSCCEEEEEEETTTEEEEEEECTTCS
T ss_pred EEEecCCCCE---EEEE------------------------------EEECCCCCEEEEEEeCCCCceEEEEEcCCCC
Confidence 1221111000 0112 39999999888877666 7788876544
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.47 E-value=3.7e-07 Score=75.49 Aligned_cols=94 Identities=5% Similarity=0.034 Sum_probs=60.2
Q ss_pred eEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCe----------------EEEEeecCCCCcce--eEE
Q 032092 9 NLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGR----------------VGVHHLDDSQQSKN--FTF 70 (147)
Q Consensus 9 ~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~----------------i~i~~~d~~~~~~~--~~~ 70 (147)
.|++||+.+++. ...... ...+.+++|+|||+.|+.++.++. |.+ |++.++... ..+
T Consensus 152 ~i~v~d~~tg~~-~~~~~~--~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~l~t~~~~~~~v~ 226 (710)
T 2xdw_A 152 TIKFMKVDGAKE-LPDVLE--RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYY--HVLGTDQSEDILCA 226 (710)
T ss_dssp EEEEEETTTTEE-EEEEEE--EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEE--EETTSCGGGCEEEE
T ss_pred EEEEEECCCCCC-Cccccc--CcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEE--EECCCCcccceEEe
Confidence 899999999863 221111 112568999999999999888765 766 666544422 112
Q ss_pred EeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCC-----CCcEEEeecCC
Q 032092 71 KCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGS-----DGAFNFWDKDS 140 (147)
Q Consensus 71 ~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~-----Dg~i~iWd~~~ 140 (147)
....... ... .++|||||++|+.++. +..|++||+.+
T Consensus 227 ~~~~~~~---~~~------------------------------~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 227 EFPDEPK---WMG------------------------------GAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp CCTTCTT---CEE------------------------------EEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred ccCCCCe---EEE------------------------------EEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 2110000 011 2399999998887654 56899999876
No 185
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.47 E-value=1.7e-07 Score=72.19 Aligned_cols=101 Identities=14% Similarity=0.154 Sum_probs=59.5
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETC 80 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~ 80 (147)
|++|+.|+.|+.||.++++.. -.+..+ ....++|+++.+++++.|+.+.. ||.++++....+..+.
T Consensus 95 v~~g~~dg~v~a~D~~tG~~~-w~~~~~-----~~~~~~p~~~~v~~~~~dg~v~a--~d~~tG~~~W~~~~~~------ 160 (369)
T 2hz6_A 95 LYMGKKQDIWYVIDLLTGEKQ-QTLSSA-----FADSLSPSTSLLYLGRTEYTITM--YDTKTRELRWNATYFD------ 160 (369)
T ss_dssp CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEEC--CCSSSSSCCCEEEEEE------
T ss_pred EEEEeCCCEEEEEECCCCcEE-EEecCC-----CcccccccCCEEEEEecCCEEEE--EECCCCCEEEeEeccc------
Confidence 456788999999999998642 222211 12456788889999999999998 8998888877665321
Q ss_pred eeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCC---CeEEEeCCCCcEEEeecCCceeeec
Q 032092 81 SVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIH---HTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg---~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
..+. ++.++. ..++.++.||.++.||.++++.+.+
T Consensus 161 -~~~~------------------------------~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~ 198 (369)
T 2hz6_A 161 -YAAS------------------------------LPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWI 198 (369)
T ss_dssp -ECCB------------------------------CCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEE
T ss_pred -ccCc------------------------------cccCCccccceEEEECCCCEEEEEECCCCcEEEE
Confidence 1122 334432 4566678899999999999988765
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.47 E-value=1.3e-05 Score=59.28 Aligned_cols=138 Identities=9% Similarity=0.029 Sum_probs=86.5
Q ss_pred ecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEee-CCeEEEEeecCCCCcceeEEEeccC--C-----
Q 032092 5 TADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSI-EGRVGVHHLDDSQQSKNFTFKCHRD--G----- 76 (147)
Q Consensus 5 s~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~-dg~i~i~~~d~~~~~~~~~~~~h~~--~----- 76 (147)
+.++.|+.||. +++. +-++..+....+.++++.|||+.+++.+. ++++.. +|. +++.+.++..... .
T Consensus 53 s~~~~V~~~d~-~G~~-~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~--vd~-~Gk~l~~~~~~~~~~~~~~~~ 127 (276)
T 3no2_A 53 SYSKGAKMITR-DGRE-LWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILE--VNM-KGEVLSKTEFETGIERPHAQF 127 (276)
T ss_dssp ECBSEEEEECT-TSCE-EEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEE--ECT-TSCEEEEEEECCSCSSGGGSC
T ss_pred eCCCCEEEECC-CCCE-EEEEcCCCCccccccEECCCCCEEEEecCCCCEEEE--EeC-CCCEEEEEeccCCCCcccccc
Confidence 45778999999 6754 34444332346889999999999999887 777766 776 6777766652111 0
Q ss_pred -ceEEeeccceeeeecCCCcceeeeeeeeeeeeee---ceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeecC
Q 032092 77 -SETCSVISFTSILAGDAPKYSSFYKVKRLHLFVK---SHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKVF 147 (147)
Q Consensus 77 -~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~~ 147 (147)
......+.-.+++...+..+..+..--+..+.+. ...++.+.|+|+++++++.++.|..+|.++++.+.+|
T Consensus 128 ~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 128 RQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRV 202 (276)
T ss_dssp SCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEE
T ss_pred cCceECCCCCEEEEecCCCEEEEECCCCCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEe
Confidence 0111122222233333333333332223333332 2345688899999999988889999999999987764
No 187
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.46 E-value=2.2e-06 Score=70.89 Aligned_cols=74 Identities=8% Similarity=-0.029 Sum_probs=54.2
Q ss_pred cceEEEEEccCCCEEEEEeeCC-----eEEEEeecCCCCcceeEEEeccCCceEEeeccceeeeecCCCcceeeeeeeee
Q 032092 31 YQMRCVAAFPDQQGFWVGSIEG-----RVGVHHLDDSQQSKNFTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRL 105 (147)
Q Consensus 31 ~~i~~la~spdg~~l~~g~~dg-----~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 105 (147)
..+..++|||||++||.+..++ +|++ ||+.+++.......+. .+.++
T Consensus 125 ~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v--~d~~tg~~~~~~~~~~------~~~~~-------------------- 176 (710)
T 2xdw_A 125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKF--MKVDGAKELPDVLERV------KFSCM-------------------- 176 (710)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCEEEEE--EETTTTEEEEEEEEEE------CSCCE--------------------
T ss_pred EEEEEEEECCCCCEEEEEEcCCCCceEEEEE--EECCCCCCCcccccCc------ccceE--------------------
Confidence 3578999999999999876654 7888 7777665543211111 13344
Q ss_pred eeeeeceEEEEEecCCCeEEEeCCCCc----------------EEEeecCCce
Q 032092 106 HLFVKSHVIVLFVQIHHTFATAGSDGA----------------FNFWDKDSKQ 142 (147)
Q Consensus 106 ~~~~~~~~~~~fspdg~~latg~~Dg~----------------i~iWd~~~~~ 142 (147)
+|+|||+.|+.++.|+. |++|++.+++
T Consensus 177 ----------~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~ 219 (710)
T 2xdw_A 177 ----------AWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQ 219 (710)
T ss_dssp ----------EECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCG
T ss_pred ----------EEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCc
Confidence 99999999998888766 9999998765
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.46 E-value=1.8e-06 Score=65.10 Aligned_cols=98 Identities=5% Similarity=-0.054 Sum_probs=68.4
Q ss_pred cCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeC----------CeEEEEeecCCCCcceeEEEeccC
Q 032092 6 ADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIE----------GRVGVHHLDDSQQSKNFTFKCHRD 75 (147)
Q Consensus 6 ~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~d----------g~i~i~~~d~~~~~~~~~~~~h~~ 75 (147)
.++.|.++|+++++. ..++... .....++++|+|+.++++..+ +.|.+ +|+.+++...++.....
T Consensus 150 ~~~~v~viD~~t~~~-~~~i~~g--~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~--id~~t~~v~~~~~~~~g 224 (328)
T 3dsm_A 150 YQNRILKIDTETDKV-VDELTIG--IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYR--IDAETFTVEKQFKFKLG 224 (328)
T ss_dssp TCCEEEEEETTTTEE-EEEEECS--SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEE--EETTTTEEEEEEECCTT
T ss_pred CCCEEEEEECCCCeE-EEEEEcC--CCccceEEcCCCCEEEEECCCccCCccccCCceEEE--EECCCCeEEEEEecCCC
Confidence 488999999999853 3444322 235789999999987777655 78888 88877765555432111
Q ss_pred CceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceee
Q 032092 76 GSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRL 144 (147)
Q Consensus 76 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~ 144 (147)
. .++.+ +|+||+++|..+.. .|.+||.++++..
T Consensus 225 ~----~p~~l------------------------------a~~~d~~~lyv~~~--~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 225 D----WPSEV------------------------------QLNGTRDTLYWINN--DIWRMPVEADRVP 257 (328)
T ss_dssp C----CCEEE------------------------------EECTTSCEEEEESS--SEEEEETTCSSCC
T ss_pred C----CceeE------------------------------EEecCCCEEEEEcc--EEEEEECCCCcee
Confidence 0 13344 99999988877655 8999999887653
No 189
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.45 E-value=3e-06 Score=66.95 Aligned_cols=103 Identities=11% Similarity=-0.102 Sum_probs=73.6
Q ss_pred CeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEe----------eCCeEEEEeecCCCCcceeEEEec--cC
Q 032092 8 RNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGS----------IEGRVGVHHLDDSQQSKNFTFKCH--RD 75 (147)
Q Consensus 8 g~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~----------~dg~i~i~~~d~~~~~~~~~~~~h--~~ 75 (147)
+.|.++|..+++. +.++..+ ..+ .++++|||+++.++. .++.|.+ +|+.+++...++.-- +.
T Consensus 99 ~~VsVID~~t~~v-v~~I~vG-~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~Vsv--iD~~t~~vv~~I~v~g~~r 172 (426)
T 3c75_H 99 TQQFVIDGSTGRI-LGMTDGG-FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEV--FDPVTFLPIADIELPDAPR 172 (426)
T ss_dssp EEEEEEETTTTEE-EEEEEEC-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEE--ECTTTCCEEEEEEETTCCC
T ss_pred CeEEEEECCCCEE-EEEEECC-CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEE--EECCCCcEEEEEECCCccc
Confidence 7999999999864 4555433 234 899999999888776 3678988 899888777666421 00
Q ss_pred CceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCC--CCcEEEeecCCceeeec
Q 032092 76 GSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGS--DGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 76 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~--Dg~i~iWd~~~~~~~~~ 146 (147)
......+..+ +|+|||++|+.+.. ++.|.+.|+.+++.+.+
T Consensus 173 ~~~g~~P~~~------------------------------~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~ 215 (426)
T 3c75_H 173 FLVGTYQWMN------------------------------ALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRM 215 (426)
T ss_dssp CCBSCCGGGS------------------------------EECTTSSEEEEEECSSSCEEEEEETTTTEEEEE
T ss_pred cccCCCcceE------------------------------EEcCCCCEEEEEecCCCCeEEEEECCCCeEEEE
Confidence 0000013445 99999998888764 57899999999988764
No 190
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.44 E-value=5e-06 Score=61.86 Aligned_cols=61 Identities=13% Similarity=0.086 Sum_probs=42.7
Q ss_pred eEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeC----CeEEEEeecCCCCcc
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIE----GRVGVHHLDDSQQSK 66 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~d----g~i~i~~~d~~~~~~ 66 (147)
+++..++.|.+||..+++. ..+.......+.+++++|+|+.+++...+ +.|.+ ||..+++.
T Consensus 60 ~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~--~d~~~~~~ 124 (333)
T 2dg1_A 60 LLDVFEGNIFKINPETKEI--KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA--ATENGDNL 124 (333)
T ss_dssp EEETTTCEEEEECTTTCCE--EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE--ECTTSCSC
T ss_pred EEECCCCEEEEEeCCCCcE--EEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEE--EeCCCCEE
Confidence 3567789999999988753 22221223468999999999988877666 67887 77765443
No 191
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.42 E-value=3.8e-06 Score=69.83 Aligned_cols=32 Identities=13% Similarity=0.124 Sum_probs=28.4
Q ss_pred EEecCCCeEEEeCCCCcEEEeecCCceeeecC
Q 032092 116 LFVQIHHTFATAGSDGAFNFWDKDSKQRLKVF 147 (147)
Q Consensus 116 ~fspdg~~latg~~Dg~i~iWd~~~~~~~~~~ 147 (147)
.+.+.+.+++.|+.||.++.||.++++.+.+|
T Consensus 481 ~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~ 512 (689)
T 1yiq_A 481 TLSTAGNLVFEGSADGRVIAYAADTGEKLWEQ 512 (689)
T ss_dssp EEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cceECCCEEEEECCCCcEEEEECCCCccceee
Confidence 67778888999999999999999999998764
No 192
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.42 E-value=3.2e-06 Score=63.81 Aligned_cols=94 Identities=10% Similarity=0.012 Sum_probs=60.2
Q ss_pred CeEEEEECCCCccceeEecCCC-CcceEEEEEccCCCEEEEEeeC-----CeEEEEeecCCCCcceeEEEeccCCceEEe
Q 032092 8 RNLVVFNLQNPQTEFKRINSPL-KYQMRCVAAFPDQQGFWVGSIE-----GRVGVHHLDDSQQSKNFTFKCHRDGSETCS 81 (147)
Q Consensus 8 g~v~iwdi~~~~~~~~~~~~~~-~~~i~~la~spdg~~l~~g~~d-----g~i~i~~~d~~~~~~~~~~~~h~~~~~~~~ 81 (147)
..|.+||+..++. ..+.... ...+..++|+|||+.|+..+.+ +.|.+ ||+.+++... +.....
T Consensus 216 ~~l~~~d~~~~~~--~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~--~d~~~g~~~~-l~~~~~------ 284 (396)
T 3c5m_A 216 ARMWLVNEDGSNV--RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYK--ANPETLENEE-VMVMPP------ 284 (396)
T ss_dssp CCCEEEETTSCCC--EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEE--ECTTTCCEEE-EEECCS------
T ss_pred ceEEEEECCCCce--eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEE--EECCCCCeEE-eeeCCC------
Confidence 4688899876542 2222211 2357889999999988877654 44777 7776554322 211110
Q ss_pred eccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEec-CCCeEEEeC----------------CCCcEEEeecCCcee
Q 032092 82 VISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQ-IHHTFATAG----------------SDGAFNFWDKDSKQR 143 (147)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fsp-dg~~latg~----------------~Dg~i~iWd~~~~~~ 143 (147)
.. . +|+| ||++++.++ .++.|++||+++++.
T Consensus 285 ~~-~------------------------------~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 285 CS-H------------------------------LMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp EE-E------------------------------EEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC
T ss_pred CC-C------------------------------CccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce
Confidence 01 3 8999 999888754 347899999987653
No 193
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.41 E-value=5.4e-06 Score=68.78 Aligned_cols=32 Identities=9% Similarity=0.118 Sum_probs=28.5
Q ss_pred EEecCCCeEEEeCCCCcEEEeecCCceeeecC
Q 032092 116 LFVQIHHTFATAGSDGAFNFWDKDSKQRLKVF 147 (147)
Q Consensus 116 ~fspdg~~latg~~Dg~i~iWd~~~~~~~~~~ 147 (147)
.+.+++.+++.|+.||.+++||+++++.+++|
T Consensus 483 ~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 483 TLTTAGNVVFQGTADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp EEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ceEeCCCEEEEECCCCcEEEEECCCCceeeee
Confidence 67788888888999999999999999998865
No 194
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.39 E-value=6.1e-06 Score=63.77 Aligned_cols=101 Identities=9% Similarity=-0.110 Sum_probs=67.6
Q ss_pred eEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEe----------eCCeEEEEeecCCCCcceeEEEec-cCCc
Q 032092 9 NLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGS----------IEGRVGVHHLDDSQQSKNFTFKCH-RDGS 77 (147)
Q Consensus 9 ~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~----------~dg~i~i~~~d~~~~~~~~~~~~h-~~~~ 77 (147)
+|.+||..+++. ..++... ..+ .+++||||+.+.++. .++.|.+ +|+.+.+...++..- ....
T Consensus 48 ~v~v~D~~t~~~-~~~i~~g-~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~v--iD~~t~~~~~~i~~~~~~~~ 121 (373)
T 2mad_H 48 QQWVLDAGSGSI-LGHVNGG-FLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEV--FDPVTFLPIADIELPDAPRF 121 (373)
T ss_pred EEEEEECCCCeE-EEEecCC-CCC--CeEECCCCCEEEEEeccccccccCCCCCeEEE--EECCCCcEEEEEECCCcccc
Confidence 889999999863 4444322 223 999999999988876 3678888 788766665554321 0000
Q ss_pred e-EEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCC--CCcEEEeecCCceeeec
Q 032092 78 E-TCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGS--DGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 78 ~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~--Dg~i~iWd~~~~~~~~~ 146 (147)
. .-.+..+ +|+|||++|+.+.. ++.|.++| ++++.+.+
T Consensus 122 ~~g~~p~~~------------------------------~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 122 DVGPYSWMN------------------------------ANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred ccCCCccce------------------------------EECCCCCEEEEEecCCCCeEEEEE-CCCCEEeE
Confidence 0 0012233 99999998888764 47899999 98887654
No 195
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.38 E-value=4e-07 Score=68.85 Aligned_cols=101 Identities=9% Similarity=0.012 Sum_probs=61.0
Q ss_pred cCCeEEEEECCCCccceeEecCCCCcceEEEEEcc-CCCEEEEEeeCCe----EEEEeecCCCCcceeEEEeccCCceEE
Q 032092 6 ADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFP-DQQGFWVGSIEGR----VGVHHLDDSQQSKNFTFKCHRDGSETC 80 (147)
Q Consensus 6 ~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~sp-dg~~l~~g~~dg~----i~i~~~d~~~~~~~~~~~~h~~~~~~~ 80 (147)
.+..|.+||+.+++. . .+. .....+..++|+| |++.|+..+.++. ..||.+|...++. ..+..+... .
T Consensus 166 ~~~~l~~~d~~~g~~-~-~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~---~ 238 (396)
T 3c5m_A 166 PTCRLIKVDIETGEL-E-VIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEG---E 238 (396)
T ss_dssp CCEEEEEEETTTCCE-E-EEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTT---E
T ss_pred CcceEEEEECCCCcE-E-eec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCC---c
Confidence 456899999998753 2 222 1234588999999 7887877665433 2334377653322 122111100 1
Q ss_pred eeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCC-----CcEEEeecCCcee
Q 032092 81 SVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSD-----GAFNFWDKDSKQR 143 (147)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~D-----g~i~iWd~~~~~~ 143 (147)
.+... +|+|||++|+.++.+ +.|++||+.+++.
T Consensus 239 ~~~~~------------------------------~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (396)
T 3c5m_A 239 SCTHE------------------------------FWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN 276 (396)
T ss_dssp EEEEE------------------------------EECTTSSCEEEEEEETTTCCEEEEEECTTTCCE
T ss_pred cccce------------------------------EECCCCCEEEEEecCCCCccceEEEEECCCCCe
Confidence 12233 999999887776543 4499999987754
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.37 E-value=2.8e-06 Score=61.26 Aligned_cols=102 Identities=5% Similarity=-0.047 Sum_probs=68.5
Q ss_pred eecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEE-eccCCceEEee
Q 032092 4 GTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFK-CHRDGSETCSV 82 (147)
Q Consensus 4 gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~-~h~~~~~~~~v 82 (147)
...++.|.+||....... .........+..|+++|+|..+++...++.|.+ +|....... ... .+-. .+
T Consensus 167 ~~~~~~i~~~~~~~~~~~--~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~--~~~~~~~~~-~~~~~~~~-----~p 236 (270)
T 1rwi_B 167 DTDNNRVVKLEAESNNQV--VLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVK--LLAGSTTST-VLPFTGLN-----TP 236 (270)
T ss_dssp EGGGTEEEEECTTTCCEE--ECCCSSCCSEEEEEECTTCCEEEEETTTSCEEE--ECTTCSCCE-ECCCCSCS-----CE
T ss_pred ECCCCEEEEEecCCCceE--eecccCCCCceEEEECCCCCEEEEECCCCcEEE--EcCCCCcce-eeccCCCC-----Cc
Confidence 345678999998875421 111111135789999999988888777889998 776532221 111 0100 12
Q ss_pred ccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceeee
Q 032092 83 ISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLK 145 (147)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~ 145 (147)
.++ +++|+|+++++...++.|++++....+.++
T Consensus 237 ~~i------------------------------~~~~~g~l~v~~~~~~~v~~~~~~~~~~~~ 269 (270)
T 1rwi_B 237 LAV------------------------------AVDSDRTVYVADRGNDRVVKLTSLEHHHHH 269 (270)
T ss_dssp EEE------------------------------EECTTCCEEEEEGGGTEEEEECCCGGGSCC
T ss_pred eeE------------------------------EECCCCCEEEEECCCCEEEEEcCCCccccC
Confidence 333 999999999999999999999998877654
No 197
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.36 E-value=2.7e-05 Score=63.48 Aligned_cols=140 Identities=13% Similarity=0.068 Sum_probs=78.9
Q ss_pred CeEeecCCeEEEEECC--CCccceeEecCCCCcceEEEEEc----cCCCEEEEEe-eCCeEEEEeecCCCCcceeEEEec
Q 032092 1 MVVGTADRNLVVFNLQ--NPQTEFKRINSPLKYQMRCVAAF----PDQQGFWVGS-IEGRVGVHHLDDSQQSKNFTFKCH 73 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~--~~~~~~~~~~~~~~~~i~~la~s----pdg~~l~~g~-~dg~i~i~~~d~~~~~~~~~~~~h 73 (147)
|.+++.|+.|.+||+. +++ .+.++... ...+.++|+ |||+++++++ .++++.+ +|..+.+.+.++...
T Consensus 211 lyv~~~dg~V~viD~~~~t~~-~v~~i~~G--~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~V--iD~~t~~~~~~i~~~ 285 (567)
T 1qks_A 211 LFVIGRDGKVNMIDLWMKEPT-TVAEIKIG--SEARSIETSKMEGWEDKYAIAGAYWPPQYVI--MDGETLEPKKIQSTR 285 (567)
T ss_dssp EEEEETTSEEEEEETTSSSCC-EEEEEECC--SEEEEEEECCSTTCTTTEEEEEEEETTEEEE--EETTTCCEEEEEECC
T ss_pred EEEEcCCCeEEEEECCCCCCc-EeEEEecC--CCCceeEEccccCCCCCEEEEEEccCCeEEE--EECCCCcEEEEEecc
Confidence 3567889999999996 654 34445432 236899999 7999877655 5699999 888877777665421
Q ss_pred cC--CceEEeec-cceeeeecCC-----------Ccceeee--eeeee-eeee--ece-EEEEEecCCCeEEEeC-CCCc
Q 032092 74 RD--GSETCSVI-SFTSILAGDA-----------PKYSSFY--KVKRL-HLFV--KSH-VIVLFVQIHHTFATAG-SDGA 132 (147)
Q Consensus 74 ~~--~~~~~~v~-~~~~~~~~~~-----------~~~~~~~--~~~~~-~~~~--~~~-~~~~fspdg~~latg~-~Dg~ 132 (147)
.. ....+... .+..+..+.+ ..+.++. ..+.. ...+ ..+ ..+.|+|||++|+++. .+++
T Consensus 286 ~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~ 365 (567)
T 1qks_A 286 GMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNK 365 (567)
T ss_dssp EECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTE
T ss_pred ccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCe
Confidence 10 00000000 0111111111 1111111 00000 0011 011 1368999998865544 5789
Q ss_pred EEEeecCCceeee
Q 032092 133 FNFWDKDSKQRLK 145 (147)
Q Consensus 133 i~iWd~~~~~~~~ 145 (147)
|.++|+++++++.
T Consensus 366 V~ViD~~t~kl~~ 378 (567)
T 1qks_A 366 LVVIDTKEGKLVA 378 (567)
T ss_dssp EEEEETTTTEEEE
T ss_pred EEEEECCCCcEEE
Confidence 9999999998765
No 198
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.35 E-value=2.4e-06 Score=63.62 Aligned_cols=97 Identities=12% Similarity=0.131 Sum_probs=64.3
Q ss_pred ecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEEeecc
Q 032092 5 TADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVIS 84 (147)
Q Consensus 5 s~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~ 84 (147)
+.++.++.| .++ +...+.... ..+.+++|+|+|+.++++..++.|.+ ||..+++.......+.. .+.+
T Consensus 24 ~~~~~~~~~---~~~-~~~~~~~~~-~~~~~~~~~~~g~l~~~~~~~~~i~~--~d~~~~~~~~~~~~~~~-----~~~~ 91 (333)
T 2dg1_A 24 ISESELQTI---TAE-PWLEISKKG-LQLEGLNFDRQGQLFLLDVFEGNIFK--INPETKEIKRPFVSHKA-----NPAA 91 (333)
T ss_dssp CCGGGSCEE---ECE-EEEEEESSC-CCEEEEEECTTSCEEEEETTTCEEEE--ECTTTCCEEEEEECSSS-----SEEE
T ss_pred eecccCccc---ccc-eeEEEeccC-ccccCcEECCCCCEEEEECCCCEEEE--EeCCCCcEEEEeeCCCC-----Ccce
Confidence 456677777 222 233333222 34689999999998888888999988 77765544322222221 2344
Q ss_pred ceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCC----CcEEEeecCCcee
Q 032092 85 FTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSD----GAFNFWDKDSKQR 143 (147)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~D----g~i~iWd~~~~~~ 143 (147)
+ +|+|+|+++++...+ +.|.+||.++++.
T Consensus 92 i------------------------------~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~ 124 (333)
T 2dg1_A 92 I------------------------------KIHKDGRLFVCYLGDFKSTGGIFAATENGDNL 124 (333)
T ss_dssp E------------------------------EECTTSCEEEEECTTSSSCCEEEEECTTSCSC
T ss_pred E------------------------------EECCCCcEEEEeCCCCCCCceEEEEeCCCCEE
Confidence 4 899999988887766 6899999877654
No 199
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.31 E-value=1.7e-05 Score=61.26 Aligned_cols=103 Identities=8% Similarity=0.044 Sum_probs=68.2
Q ss_pred cCCeEEEEECCCCccc-eeEecC------CC---CcceEEEEEccCCCEEEEEee----------CCeEEEEeecCCCCc
Q 032092 6 ADRNLVVFNLQNPQTE-FKRINS------PL---KYQMRCVAAFPDQQGFWVGSI----------EGRVGVHHLDDSQQS 65 (147)
Q Consensus 6 ~dg~v~iwdi~~~~~~-~~~~~~------~~---~~~i~~la~spdg~~l~~g~~----------dg~i~i~~~d~~~~~ 65 (147)
..+.+.+.|+...... ...+.. .. ......++++||++.+.+... .+.|.+ +|..+++
T Consensus 232 ~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~V--ID~~t~~ 309 (373)
T 2mad_H 232 YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTS--VTGLVGQ 309 (373)
T ss_pred CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEE--EECCCCE
Confidence 4568888898765321 111110 00 012445889999887766543 356877 8888877
Q ss_pred ceeEEEeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCC-eEEEeC-CCCcEEEeecCCcee
Q 032092 66 KNFTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHH-TFATAG-SDGAFNFWDKDSKQR 143 (147)
Q Consensus 66 ~~~~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~-~latg~-~Dg~i~iWd~~~~~~ 143 (147)
.+.++..-. .+..+ +|+|||+ +++++. .++.|.++|+++++.
T Consensus 310 vv~~i~~g~------~p~~i------------------------------~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 310 TSSQISLGH------DVDAI------------------------------SVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred EEEEEECCC------CcCeE------------------------------EECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence 776664211 13455 9999998 788877 589999999999988
Q ss_pred eec
Q 032092 144 LKV 146 (147)
Q Consensus 144 ~~~ 146 (147)
+++
T Consensus 354 v~~ 356 (373)
T 2mad_H 354 DQS 356 (373)
T ss_pred Eee
Confidence 764
No 200
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.28 E-value=1.6e-05 Score=57.25 Aligned_cols=102 Identities=8% Similarity=-0.038 Sum_probs=65.8
Q ss_pred EeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEEee
Q 032092 3 VGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSV 82 (147)
Q Consensus 3 ~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v 82 (147)
++..++.|.+||...... ..+.......+..|+++|+|+.+++...++.|.+ +|..+........... ..+
T Consensus 82 v~~~~~~i~~~d~~~~~~--~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~--~~~~~~~~~~~~~~~~-----~~p 152 (270)
T 1rwi_B 82 VTDFNNRVVTLAAGSNNQ--TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVK--LAAGSKTQTVLPFTGL-----NDP 152 (270)
T ss_dssp EEETTTEEEEECTTCSCC--EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEE--ECTTCCSCEECCCCSC-----CSC
T ss_pred EEcCCCEEEEEeCCCceE--eeeecCCcCCCcceEECCCCCEEEEECCCCEEEE--EECCCceeEeeccccC-----CCc
Confidence 333478999999876532 2222122235789999999998888778899988 6654332211100000 023
Q ss_pred ccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCcee
Q 032092 83 ISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQR 143 (147)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~ 143 (147)
..+ +++|+|+++++...++.|.+||...+..
T Consensus 153 ~~i------------------------------~~~~~g~l~v~~~~~~~i~~~~~~~~~~ 183 (270)
T 1rwi_B 153 DGV------------------------------AVDNSGNVYVTDTDNNRVVKLEAESNNQ 183 (270)
T ss_dssp CCE------------------------------EECTTCCEEEEEGGGTEEEEECTTTCCE
T ss_pred eeE------------------------------EEeCCCCEEEEECCCCEEEEEecCCCce
Confidence 444 8899998888877788899999876543
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.27 E-value=1.5e-05 Score=58.51 Aligned_cols=98 Identities=10% Similarity=0.115 Sum_probs=66.2
Q ss_pred ecCCeEEEEECC-CCcc----ceeEecCCCC-cceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCce
Q 032092 5 TADRNLVVFNLQ-NPQT----EFKRINSPLK-YQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSE 78 (147)
Q Consensus 5 s~dg~v~iwdi~-~~~~----~~~~~~~~~~-~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~ 78 (147)
..++.|.+||+. +++. .+..+. ... ..+..++++|+|+.+++...++.|.+ ||+.+++....+..+..
T Consensus 195 ~~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~--~d~~~g~~~~~~~~~~~--- 268 (314)
T 1pjx_A 195 TPTKKLWSYDIKGPAKIENKKVWGHIP-GTHEGGADGMDFDEDNNLLVANWGSSHIEV--FGPDGGQPKMRIRCPFE--- 268 (314)
T ss_dssp TTTTEEEEEEEEETTEEEEEEEEEECC-CCSSCEEEEEEEBTTCCEEEEEETTTEEEE--ECTTCBSCSEEEECSSS---
T ss_pred CCCCeEEEEECCCCCccccceEEEECC-CCCCCCCCceEECCCCCEEEEEcCCCEEEE--EcCCCCcEeEEEeCCCC---
Confidence 457889999986 3321 111111 111 34688999999998888878899988 78765665555543321
Q ss_pred EEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCC-eEEEeCCCCcEEEeecCC
Q 032092 79 TCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHH-TFATAGSDGAFNFWDKDS 140 (147)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~-~latg~~Dg~i~iWd~~~ 140 (147)
.+.++ +|+|+|+ ++++...++.|..|+.+.
T Consensus 269 --~~~~i------------------------------~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 269 --KPSNL------------------------------HFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp --CEEEE------------------------------EECTTSSEEEEEETTTTEEEEEECSS
T ss_pred --CceeE------------------------------EECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 13344 8999998 566666778999999875
No 202
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.26 E-value=2.1e-06 Score=70.82 Aligned_cols=75 Identities=9% Similarity=-0.044 Sum_probs=52.6
Q ss_pred cceEEEEEccCCCEEEE-----EeeCCeEEEEeecCCCCcceeEEEeccCCceEEeeccceeeeecCCCcceeeeeeeee
Q 032092 31 YQMRCVAAFPDQQGFWV-----GSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRL 105 (147)
Q Consensus 31 ~~i~~la~spdg~~l~~-----g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 105 (147)
..+.+++|||||++||. |+.+.+|++ ||+.+++... ..+.... ...+.
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v--~dl~tg~~~~--~~~~~~~---~~~~~-------------------- 173 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHV--IDVDSGEWSK--VDVIEGG---KYATP-------------------- 173 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCCEEEE--EETTTCCBCS--SCCBSCC---TTCCC--------------------
T ss_pred EEEEEEEECCCCCEEEEEECCCCCceEEEEE--EECCCCCCcC--CcccCcc---cccce--------------------
Confidence 46889999999999994 444567988 7776665431 0111100 01334
Q ss_pred eeeeeceEEEEEecCCCeEEEeCCCCc-------------EEEeecCCce
Q 032092 106 HLFVKSHVIVLFVQIHHTFATAGSDGA-------------FNFWDKDSKQ 142 (147)
Q Consensus 106 ~~~~~~~~~~~fspdg~~latg~~Dg~-------------i~iWd~~~~~ 142 (147)
+|+|||+.|+.++.|.. |++|++.+++
T Consensus 174 ----------~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~ 213 (695)
T 2bkl_A 174 ----------KWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEP 213 (695)
T ss_dssp ----------EECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCG
T ss_pred ----------EEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCc
Confidence 99999999999988876 9999998765
No 203
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.25 E-value=8.3e-06 Score=63.22 Aligned_cols=58 Identities=14% Similarity=-0.062 Sum_probs=45.4
Q ss_pred eEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEe----------eCCeEEEEeecCCCCcceeEEEe
Q 032092 9 NLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGS----------IEGRVGVHHLDDSQQSKNFTFKC 72 (147)
Q Consensus 9 ~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~----------~dg~i~i~~~d~~~~~~~~~~~~ 72 (147)
+|.++|..+++. +.++..+. .+ .++++|||+++.++. .+++|.+ +|+.+++...++..
T Consensus 47 ~vsvID~~t~~v-~~~i~vG~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~Vsv--iD~~T~~vv~~I~v 114 (368)
T 1mda_H 47 ENWVSCAGCGVT-LGHSLGAF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEV--FDPVTFLPIADIEL 114 (368)
T ss_dssp EEEEEETTTTEE-EEEEEECT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEE--ECTTTCCEEEEEEE
T ss_pred eEEEEECCCCeE-EEEEeCCC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEE--EECCCCCEEEEEEC
Confidence 889999999864 45554332 34 799999999888876 4788999 99999888888764
No 204
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.19 E-value=1e-05 Score=63.17 Aligned_cols=96 Identities=19% Similarity=0.064 Sum_probs=62.3
Q ss_pred eEeecCCeEEEEECCCCc----------cceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEE
Q 032092 2 VVGTADRNLVVFNLQNPQ----------TEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFK 71 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~----------~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~ 71 (147)
++|+.+ .+++|++...+ ++.... ++.. |+.|+| |++.|+++ .+|.|++ ||+++........
T Consensus 53 ~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~--~lp~-V~~l~f--d~~~L~v~-~~~~l~v--~dv~sl~~~~~~~ 123 (388)
T 1xip_A 53 VAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK--EIPD-VIFVCF--HGDQVLVS-TRNALYS--LDLEELSEFRTVT 123 (388)
T ss_dssp EEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE--ECTT-EEEEEE--ETTEEEEE-ESSEEEE--EESSSTTCEEEEE
T ss_pred EEeCCC-EEEEEEhhHhhhhhccccccccceEEe--eCCC-eeEEEE--CCCEEEEE-cCCcEEE--EEchhhhccCccc
Confidence 455555 56779876433 111122 2334 999999 89999999 8899999 7776544444444
Q ss_pred eccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCcee
Q 032092 72 CHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQR 143 (147)
Q Consensus 72 ~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~ 143 (147)
.|.. ++.++ .+.|. .+|.+.+||.+.+||+++++.
T Consensus 124 ~~~~-----~v~~i------------------------------~~~~p--~~av~~~dG~L~v~dl~~~~~ 158 (388)
T 1xip_A 124 SFEK-----PVFQL------------------------------KNVNN--TLVILNSVNDLSALDLRTKST 158 (388)
T ss_dssp ECSS-----CEEEE------------------------------EECSS--EEEEEETTSEEEEEETTTCCE
T ss_pred eeec-----ceeeE------------------------------EecCC--CEEEEECCCCEEEEEccCCcc
Confidence 4442 12222 33332 389999999999999987654
No 205
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.17 E-value=2.3e-05 Score=58.43 Aligned_cols=39 Identities=15% Similarity=0.204 Sum_probs=27.2
Q ss_pred eEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeC
Q 032092 9 NLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIE 51 (147)
Q Consensus 9 ~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~d 51 (147)
.|.+||+.+++. . .+... .. +..++|+|||+.|+.++.+
T Consensus 86 ~l~~~~~~~g~~-~-~l~~~-~~-~~~~~wspdg~~l~~~~~~ 124 (347)
T 2gop_A 86 EIWVADLETLSS-K-KILEA-KN-IRSLEWNEDSRKLLIVGFK 124 (347)
T ss_dssp EEEEEETTTTEE-E-EEEEE-SE-EEEEEECTTSSEEEEEEEC
T ss_pred eEEEEECCCCce-E-EEEcC-CC-ccceeECCCCCEEEEEEcc
Confidence 478889987742 2 22221 23 8899999999999988753
No 206
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.10 E-value=1.9e-05 Score=57.99 Aligned_cols=73 Identities=8% Similarity=-0.067 Sum_probs=55.6
Q ss_pred ceEEEEEccCCC-EEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeee
Q 032092 32 QMRCVAAFPDQQ-GFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVK 110 (147)
Q Consensus 32 ~i~~la~spdg~-~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (147)
...+++|+|+|+ .++++..++.|.. ||+.++ ...+..+.. .+..+
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~~~i~~--~~~~~~--~~~~~~~~~-----~~~~l------------------------- 74 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQNRTWA--WSDDGQ--LSPEMHPSH-----HQNGH------------------------- 74 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGGTEEEE--EETTSC--EEEEESSCS-----SEEEE-------------------------
T ss_pred cccCCeEeCCCCEEEEEeCCCCEEEE--EECCCC--eEEEECCCC-----Cccee-------------------------
Confidence 367899999998 7788888999988 777654 444543322 23344
Q ss_pred ceEEEEEecCCCeEEEeCCCCcEEEeecCCcee
Q 032092 111 SHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQR 143 (147)
Q Consensus 111 ~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~ 143 (147)
+|+|+|+++++...++.|.+||.++++.
T Consensus 75 -----~~~~dg~l~v~~~~~~~i~~~d~~~g~~ 102 (296)
T 3e5z_A 75 -----CLNKQGHLIACSHGLRRLERQREPGGEW 102 (296)
T ss_dssp -----EECTTCCEEEEETTTTEEEEECSTTCCE
T ss_pred -----eECCCCcEEEEecCCCeEEEEcCCCCcE
Confidence 9999999999888889999999877654
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.02 E-value=3.4e-05 Score=60.95 Aligned_cols=104 Identities=12% Similarity=0.071 Sum_probs=69.0
Q ss_pred ecCCeEEEEECCCCccce-eEecC------CCC---cceEEEEEccCCCEEEEEee----------CCeEEEEeecCCCC
Q 032092 5 TADRNLVVFNLQNPQTEF-KRINS------PLK---YQMRCVAAFPDQQGFWVGSI----------EGRVGVHHLDDSQQ 64 (147)
Q Consensus 5 s~dg~v~iwdi~~~~~~~-~~~~~------~~~---~~i~~la~spdg~~l~~g~~----------dg~i~i~~~d~~~~ 64 (147)
+..+.|.+.|+......+ ..+.. ... .....++++||++.+.+... +++|.+ +|..+.
T Consensus 283 s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsV--ID~~T~ 360 (426)
T 3c75_H 283 TYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVV--LNAETG 360 (426)
T ss_dssp BTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEE--EETTTC
T ss_pred eCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEE--EECCCC
Confidence 456788899987643111 11100 000 11234799999887666542 356887 899888
Q ss_pred cceeEEEeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCC-eEEEeC-CCCcEEEeecCCce
Q 032092 65 SKNFTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHH-TFATAG-SDGAFNFWDKDSKQ 142 (147)
Q Consensus 65 ~~~~~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~-~latg~-~Dg~i~iWd~~~~~ 142 (147)
+.+.++..-. .+..+ +|+|||+ +++++. .++.|.++|+.+++
T Consensus 361 kvv~~I~vg~------~P~gi------------------------------a~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 361 ERINKIELGH------EIDSI------------------------------NVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp CEEEEEEEEE------EECEE------------------------------EECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred eEEEEEECCC------CcCeE------------------------------EEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 8877765311 24555 9999998 777777 59999999999999
Q ss_pred eeec
Q 032092 143 RLKV 146 (147)
Q Consensus 143 ~~~~ 146 (147)
.+++
T Consensus 405 vv~t 408 (426)
T 3c75_H 405 ELRS 408 (426)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8865
No 208
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.01 E-value=9.7e-06 Score=67.42 Aligned_cols=95 Identities=6% Similarity=-0.058 Sum_probs=57.1
Q ss_pred CeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCe--------------EEEEeecCCCCcce--eEEE
Q 032092 8 RNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGR--------------VGVHHLDDSQQSKN--FTFK 71 (147)
Q Consensus 8 g~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~--------------i~i~~~d~~~~~~~--~~~~ 71 (147)
..|++||+.+++. ..... ....+..++|+|| +.|+.++.++. |.+ +++.++... ..+.
T Consensus 189 ~~i~v~dl~tg~~-~~~~~--~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~--~~lgt~~~~~~lv~~ 262 (741)
T 1yr2_A 189 RTVKFVGVADGKP-LADEL--KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWL--HRLGTPQSADQPVFA 262 (741)
T ss_dssp EEEEEEETTTCCE-EEEEE--EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEE--EETTSCGGGCEEEEC
T ss_pred EEEEEEECCCCCC-CCccC--CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEE--EECCCCchhCEEEec
Confidence 4699999999863 22111 1112357899999 99998887664 444 565443321 1111
Q ss_pred eccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCC-----cEEEeecCCc
Q 032092 72 CHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDG-----AFNFWDKDSK 141 (147)
Q Consensus 72 ~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg-----~i~iWd~~~~ 141 (147)
...... .+ .+++|||||++|+..+.++ .|++||+.++
T Consensus 263 ~~~~~~---~~------------------------------~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 263 TPELPK---RG------------------------------HGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp CTTCTT---CE------------------------------EEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred cCCCCe---EE------------------------------EEEEECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence 110000 01 1239999999888776544 8999998765
No 209
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.97 E-value=8.3e-05 Score=58.01 Aligned_cols=106 Identities=14% Similarity=0.072 Sum_probs=70.2
Q ss_pred EeecCCeEEEEECCCCcc-ceeEec--------CC-CCcceEEEEEccCCCEEEEEee----------CCeEEEEeecCC
Q 032092 3 VGTADRNLVVFNLQNPQT-EFKRIN--------SP-LKYQMRCVAAFPDQQGFWVGSI----------EGRVGVHHLDDS 62 (147)
Q Consensus 3 ~gs~dg~v~iwdi~~~~~-~~~~~~--------~~-~~~~i~~la~spdg~~l~~g~~----------dg~i~i~~~d~~ 62 (147)
..+.+|.|++.|+..... ..+.+. .. .......++++|+++.+.+... .++|.+ +|+.
T Consensus 242 ~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~v--iD~~ 319 (386)
T 3sjl_D 242 WPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV--LDAK 319 (386)
T ss_dssp EEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE--EETT
T ss_pred EEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEE--EECC
Confidence 346678999999987542 112221 00 0012346888999888776543 135655 9998
Q ss_pred CCcceeEEEeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCC-eEEE-eCCCCcEEEeecCC
Q 032092 63 QQSKNFTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHH-TFAT-AGSDGAFNFWDKDS 140 (147)
Q Consensus 63 ~~~~~~~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~-~lat-g~~Dg~i~iWd~~~ 140 (147)
+++.+.++..-. .++++ +|+||++ +|++ ...+++|.++|..+
T Consensus 320 t~kv~~~i~vg~------~~~~l------------------------------avs~D~~~~ly~tn~~~~~VsViD~~t 363 (386)
T 3sjl_D 320 TGERLAKFEMGH------EIDSI------------------------------NVSQDEKPLLYALSTGDKTLYIHDAES 363 (386)
T ss_dssp TCCEEEEEEEEE------EECEE------------------------------EECSSSSCEEEEEETTTTEEEEEETTT
T ss_pred CCeEEEEEECCC------CcceE------------------------------EECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 888877764211 34555 9999996 5555 56699999999999
Q ss_pred ceeeec
Q 032092 141 KQRLKV 146 (147)
Q Consensus 141 ~~~~~~ 146 (147)
++.+++
T Consensus 364 ~k~~~~ 369 (386)
T 3sjl_D 364 GEELRS 369 (386)
T ss_dssp CCEEEE
T ss_pred CcEEEE
Confidence 998875
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.93 E-value=0.0015 Score=47.98 Aligned_cols=56 Identities=14% Similarity=0.083 Sum_probs=37.2
Q ss_pred EeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcc
Q 032092 3 VGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSK 66 (147)
Q Consensus 3 ~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~ 66 (147)
+...++.|..||..+++. ..+.. ...+.+++++|+|+.++ +. ++.|.+ +|..+++.
T Consensus 30 ~d~~~~~i~~~d~~~~~~--~~~~~--~~~~~~i~~~~dG~l~v-~~-~~~l~~--~d~~~g~~ 85 (297)
T 3g4e_A 30 VDIPAKKVCRWDSFTKQV--QRVTM--DAPVSSVALRQSGGYVA-TI-GTKFCA--LNWKEQSA 85 (297)
T ss_dssp EETTTTEEEEEETTTCCE--EEEEC--SSCEEEEEEBTTSSEEE-EE-TTEEEE--EETTTTEE
T ss_pred EECCCCEEEEEECCCCcE--EEEeC--CCceEEEEECCCCCEEE-EE-CCeEEE--EECCCCcE
Confidence 445578899999887643 23322 24589999999999544 44 567877 67655443
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.91 E-value=0.00022 Score=52.64 Aligned_cols=82 Identities=12% Similarity=0.023 Sum_probs=54.2
Q ss_pred eEEEEEccCCCEE-EEEeeCCeEEEEeecCCCCccee--EEEeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeee
Q 032092 33 MRCVAAFPDQQGF-WVGSIEGRVGVHHLDDSQQSKNF--TFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFV 109 (147)
Q Consensus 33 i~~la~spdg~~l-~~g~~dg~i~i~~~d~~~~~~~~--~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (147)
.+.++|+||++.+ ++.+.++.|.++++|..++.... .+..... ....+..+
T Consensus 151 pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~--~~~~p~g~------------------------ 204 (297)
T 3g4e_A 151 SNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEK--EEQIPDGM------------------------ 204 (297)
T ss_dssp EEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCG--GGCEEEEE------------------------
T ss_pred ccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCC--CCCCCCee------------------------
Confidence 5789999999865 55566899999666655554321 1110000 00012333
Q ss_pred eceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 110 KSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 110 ~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
++.|+|+++++...++.|..||.++++.+.+
T Consensus 205 ------~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~ 235 (297)
T 3g4e_A 205 ------CIDAEGKLWVACYNGGRVIRLDPVTGKRLQT 235 (297)
T ss_dssp ------EEBTTSCEEEEEETTTEEEEECTTTCCEEEE
T ss_pred ------EECCCCCEEEEEcCCCEEEEEcCCCceEEEE
Confidence 8999999888887788899999988877653
No 212
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.90 E-value=6.8e-05 Score=58.05 Aligned_cols=74 Identities=11% Similarity=0.097 Sum_probs=54.1
Q ss_pred EEEccCCCEEEEEee-C--------CeEEEEeecCCCCcceeEEEeccCCceEEeeccceeeeecCCCcceeeeeeeeee
Q 032092 36 VAAFPDQQGFWVGSI-E--------GRVGVHHLDDSQQSKNFTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLH 106 (147)
Q Consensus 36 la~spdg~~l~~g~~-d--------g~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 106 (147)
++++||++.+.++.. + +.+.+ +|..+++.+.++.... .+..+
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~V--iD~~t~~vv~~i~vg~------~p~gi--------------------- 319 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSS--VTASVGQTSGPISNGH------DSDAI--------------------- 319 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEE--EESSSCCEEECCEEEE------EECEE---------------------
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEE--EECCCCeEEEEEECCC------CcceE---------------------
Confidence 789999988776543 2 34557 7888777766554321 24455
Q ss_pred eeeeceEEEEEecCCC-eEEEeC-CCCcEEEeecCCceeeecC
Q 032092 107 LFVKSHVIVLFVQIHH-TFATAG-SDGAFNFWDKDSKQRLKVF 147 (147)
Q Consensus 107 ~~~~~~~~~~fspdg~-~latg~-~Dg~i~iWd~~~~~~~~~~ 147 (147)
+|+|||+ .+++.. .+++|.++|+.+++.++++
T Consensus 320 ---------~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I 353 (368)
T 1mda_H 320 ---------IAAQDGASDNYANSAGTEVLDIYDAASDQDQSSV 353 (368)
T ss_dssp ---------EECCSSSCEEEEEETTTTEEEEEESSSCEEEEEC
T ss_pred ---------EECCCCCEEEEEccCCCCeEEEEECCCCcEEEEE
Confidence 9999996 567776 6999999999999988763
No 213
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.85 E-value=0.00031 Score=57.18 Aligned_cols=31 Identities=19% Similarity=0.110 Sum_probs=24.6
Q ss_pred EecCCCeEEEeCCCCcEEEeecCCceeeecC
Q 032092 117 FVQIHHTFATAGSDGAFNFWDKDSKQRLKVF 147 (147)
Q Consensus 117 fspdg~~latg~~Dg~i~iWd~~~~~~~~~~ 147 (147)
....+.++..++.||.++.||.++++.+.+|
T Consensus 471 ~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~ 501 (571)
T 2ad6_A 471 LYTKGGLVWYATLDGYLKALDNKDGKELWNF 501 (571)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EEECCCEEEEEcCCCeEEEEECCCCCEEEEE
Confidence 3444566677889999999999999998764
No 214
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.84 E-value=0.00023 Score=52.85 Aligned_cols=101 Identities=9% Similarity=-0.003 Sum_probs=66.9
Q ss_pred eEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEE-EEEeeCCeEEEEeecCCCCcceeEEEeccCCceEE
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGF-WVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETC 80 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l-~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~ 80 (147)
.+.+.+|.|+.+|+++++.. ..+. +. ......+.++++.| ++.-.++.+.+ +|..+.+.+.++..-
T Consensus 69 ~stG~~g~v~~iD~~Tgkv~-~~~l-~~--~~FgeGit~~g~~Ly~ltw~~~~v~V--~D~~Tl~~~~ti~~~------- 135 (268)
T 3nok_A 69 ESTGHQGTLRQLSLESAQPV-WMER-LG--NIFAEGLASDGERLYQLTWTEGLLFT--WSGMPPQRERTTRYS------- 135 (268)
T ss_dssp EEETTTTEEEECCSSCSSCS-EEEE-CT--TCCEEEEEECSSCEEEEESSSCEEEE--EETTTTEEEEEEECS-------
T ss_pred EEcCCCCEEEEEECCCCcEE-eEEC-CC--CcceeEEEEeCCEEEEEEccCCEEEE--EECCcCcEEEEEeCC-------
Confidence 35567788999999999753 3332 21 23343344555554 44445788888 899888888777631
Q ss_pred eeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 81 SVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.... ..++|++.|..+..++.|.++|.++.+.+.+
T Consensus 136 -~eGw------------------------------GLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~ 170 (268)
T 3nok_A 136 -GEGW------------------------------GLCYWNGKLVRSDGGTMLTFHEPDGFALVGA 170 (268)
T ss_dssp -SCCC------------------------------CEEEETTEEEEECSSSEEEEECTTTCCEEEE
T ss_pred -Ccee------------------------------EEecCCCEEEEECCCCEEEEEcCCCCeEEEE
Confidence 1122 5567887777777788899999888777653
No 215
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.84 E-value=0.0002 Score=53.14 Aligned_cols=105 Identities=6% Similarity=-0.024 Sum_probs=70.5
Q ss_pred ecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEEeecc
Q 032092 5 TADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVIS 84 (147)
Q Consensus 5 s~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~ 84 (147)
-.++.+.++|..+.+. +.++..+ . + ....++|||+.+.++..++++.+ +|+.+.+...++..-........++.
T Consensus 83 ~~~~~v~viD~~t~~v-~~~i~~g-~-~-~g~glt~Dg~~l~vs~gs~~l~v--iD~~t~~v~~~I~Vg~~~~p~~~~ne 156 (266)
T 2iwa_A 83 WLKNIGFIYDRRTLSN-IKNFTHQ-M-K-DGWGLATDGKILYGSDGTSILYE--IDPHTFKLIKKHNVKYNGHRVIRLNE 156 (266)
T ss_dssp TTCSEEEEEETTTTEE-EEEEECC-S-S-SCCEEEECSSSEEEECSSSEEEE--ECTTTCCEEEEEECEETTEECCCEEE
T ss_pred ecCCEEEEEECCCCcE-EEEEECC-C-C-CeEEEEECCCEEEEECCCCeEEE--EECCCCcEEEEEEECCCCccccccee
Confidence 4578999999998854 4555432 0 1 13457789888887778888888 99988776666542111100001233
Q ss_pred ceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 85 FTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
+ .|. +|+.+++...++.|.+-|.++++.+.+
T Consensus 157 l------------------------------e~~-dg~lyvn~~~~~~V~vID~~tg~V~~~ 187 (266)
T 2iwa_A 157 L------------------------------EYI-NGEVWANIWQTDCIARISAKDGTLLGW 187 (266)
T ss_dssp E------------------------------EEE-TTEEEEEETTSSEEEEEETTTCCEEEE
T ss_pred E------------------------------EEE-CCEEEEecCCCCeEEEEECCCCcEEEE
Confidence 3 777 777777777788999999999988764
No 216
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.83 E-value=0.00023 Score=56.58 Aligned_cols=110 Identities=15% Similarity=0.218 Sum_probs=71.5
Q ss_pred eEeecCCeEEEEECCCC-cc--ceeEec------CCCCcceEEEEEccCCCEEEEEeeC------CeEEEEeecCCCCcc
Q 032092 2 VVGTADRNLVVFNLQNP-QT--EFKRIN------SPLKYQMRCVAAFPDQQGFWVGSIE------GRVGVHHLDDSQQSK 66 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~-~~--~~~~~~------~~~~~~i~~la~spdg~~l~~g~~d------g~i~i~~~d~~~~~~ 66 (147)
+.|-.++.|.++|+.+. .+ ..+.++ .........+.++|+| .+++...+ |.+.+ +|..+++.
T Consensus 100 v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~v--lD~~T~~v 176 (462)
T 2ece_A 100 VPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILM--LDHYSFEP 176 (462)
T ss_dssp EEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEE--ECTTTCCE
T ss_pred EccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEE--EECCCCeE
Confidence 45667889999999754 22 233342 0011124567889999 77766665 78888 89988777
Q ss_pred eeEEEeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeC------------------
Q 032092 67 NFTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAG------------------ 128 (147)
Q Consensus 67 ~~~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~------------------ 128 (147)
+.++..-... . .-.+.+ -|+|+++.+++..
T Consensus 177 ~~~~~~~~~~-~-~~~Yd~------------------------------~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~ 224 (462)
T 2ece_A 177 LGKWEIDRGD-Q-YLAYDF------------------------------WWNLPNEVLVSSEWAVPNTIEDGLKLEHLKD 224 (462)
T ss_dssp EEECCSBCTT-C-CCCCCE------------------------------EEETTTTEEEECBCCCHHHHTTCCCTTTHHH
T ss_pred EEEEccCCCC-c-cccceE------------------------------EECCCCCEEEEccCcCccccccccchhhhhh
Confidence 7666421110 0 001123 7899999988884
Q ss_pred -CCCcEEEeecCCceeeec
Q 032092 129 -SDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 129 -~Dg~i~iWd~~~~~~~~~ 146 (147)
.+.+|.+||+.+++.+.+
T Consensus 225 ~~~d~V~v~D~~~~k~~~t 243 (462)
T 2ece_A 225 RYGNRIHFWDLRKRKRIHS 243 (462)
T ss_dssp HSCCEEEEEETTTTEEEEE
T ss_pred ccCCEEEEEECCCCcEeeE
Confidence 367899999998877654
No 217
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.82 E-value=0.00048 Score=49.69 Aligned_cols=93 Identities=8% Similarity=0.067 Sum_probs=58.2
Q ss_pred cCCeEEEEECCCCccceeEecC-CCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEEeecc
Q 032092 6 ADRNLVVFNLQNPQTEFKRINS-PLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVIS 84 (147)
Q Consensus 6 ~dg~v~iwdi~~~~~~~~~~~~-~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~ 84 (147)
.++.|.+||.. ++ +..+.. .....+.+|+++|+|+.+++...++.|.. +|.. ++ ...+....... .+..
T Consensus 34 ~~~~v~~~d~~-~~--~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~--~~~~-g~-~~~~~~~~~~~---~~~~ 103 (299)
T 2z2n_A 34 KANMISCINLD-GK--ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGR--ITKK-GI-IKEYTLPNPDS---APYG 103 (299)
T ss_dssp TTTEEEEECTT-CC--EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE--ECTT-SC-EEEEECSSTTC---CEEE
T ss_pred CCCcEEEEcCC-CC--eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEE--ECCC-Cc-EEEEeCCCcCC---Ccee
Confidence 36889999988 53 223221 12245889999999998888777888888 7764 32 22222110000 1222
Q ss_pred ceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeec
Q 032092 85 FTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDK 138 (147)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~ 138 (147)
+ ++.|+|+++++...++.|..||.
T Consensus 104 i------------------------------~~~~~g~l~v~~~~~~~i~~~d~ 127 (299)
T 2z2n_A 104 I------------------------------TEGPNGDIWFTEMNGNRIGRITD 127 (299)
T ss_dssp E------------------------------EECTTSCEEEEETTTTEEEEECT
T ss_pred e------------------------------EECCCCCEEEEecCCceEEEECC
Confidence 2 77788877777766777888876
No 218
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.82 E-value=0.0021 Score=46.88 Aligned_cols=135 Identities=10% Similarity=-0.034 Sum_probs=73.5
Q ss_pred EeecCCeEEEEECCCCccceeEe-cC---C-CCcceEEEEEccCCCEEEEEeeC---------------CeEEEEeecCC
Q 032092 3 VGTADRNLVVFNLQNPQTEFKRI-NS---P-LKYQMRCVAAFPDQQGFWVGSIE---------------GRVGVHHLDDS 62 (147)
Q Consensus 3 ~gs~dg~v~iwdi~~~~~~~~~~-~~---~-~~~~i~~la~spdg~~l~~g~~d---------------g~i~i~~~d~~ 62 (147)
+++..+.|.+||.. ++. ..+ .. . ....+.+++++|+|+.+++...+ +.|.. +|..
T Consensus 87 v~~~~~~l~~~d~~-g~~--~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~ 161 (314)
T 1pjx_A 87 VADMRLGLLVVQTD-GTF--EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYC--FTTD 161 (314)
T ss_dssp EEETTTEEEEEETT-SCE--EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEE--ECTT
T ss_pred EEECCCCEEEEeCC-CCE--EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEE--ECCC
Confidence 44445578999988 542 222 11 1 11247899999999888776655 45544 7765
Q ss_pred CCcceeEEEeccCC--ceEEe----eccceeeee-cCCCcceeeeeee--e-----eeeeee-----ceEEEEEecCCCe
Q 032092 63 QQSKNFTFKCHRDG--SETCS----VISFTSILA-GDAPKYSSFYKVK--R-----LHLFVK-----SHVIVLFVQIHHT 123 (147)
Q Consensus 63 ~~~~~~~~~~h~~~--~~~~~----v~~~~~~~~-~~~~~~~~~~~~~--~-----~~~~~~-----~~~~~~fspdg~~ 123 (147)
++...... +... ...+. ...-.+..+ ..+..+..+..-. + ....+. ....+++.|+|++
T Consensus 162 -g~~~~~~~-~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l 239 (314)
T 1pjx_A 162 -GQMIQVDT-AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNL 239 (314)
T ss_dssp -SCEEEEEE-EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCE
T ss_pred -CCEEEecc-CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCE
Confidence 44322221 1111 11222 111112233 2333444433110 1 111222 1346899999999
Q ss_pred EEEeCCCCcEEEeecCCceee
Q 032092 124 FATAGSDGAFNFWDKDSKQRL 144 (147)
Q Consensus 124 latg~~Dg~i~iWd~~~~~~~ 144 (147)
+++...++.|.+||.++++.+
T Consensus 240 ~v~~~~~~~i~~~d~~~g~~~ 260 (314)
T 1pjx_A 240 LVANWGSSHIEVFGPDGGQPK 260 (314)
T ss_dssp EEEEETTTEEEEECTTCBSCS
T ss_pred EEEEcCCCEEEEEcCCCCcEe
Confidence 888878889999998866554
No 219
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.81 E-value=0.0003 Score=52.24 Aligned_cols=104 Identities=7% Similarity=-0.123 Sum_probs=70.8
Q ss_pred ecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEEeecc
Q 032092 5 TADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVIS 84 (147)
Q Consensus 5 s~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~ 84 (147)
-.++.+.+||.++.+. +.++..+.. ...+.+|++.|+.+..+++|.+ +|+.+.+...+++..........++.
T Consensus 113 w~~~~v~V~D~~Tl~~-~~ti~~~~e----GwGLt~Dg~~L~vSdGs~~l~~--iDp~T~~v~~~I~V~~~g~~v~~lNe 185 (268)
T 3nok_A 113 WTEGLLFTWSGMPPQR-ERTTRYSGE----GWGLCYWNGKLVRSDGGTMLTF--HEPDGFALVGAVQVKLRGQPVELINE 185 (268)
T ss_dssp SSSCEEEEEETTTTEE-EEEEECSSC----CCCEEEETTEEEEECSSSEEEE--ECTTTCCEEEEEECEETTEECCCEEE
T ss_pred ccCCEEEEEECCcCcE-EEEEeCCCc----eeEEecCCCEEEEECCCCEEEE--EcCCCCeEEEEEEeCCCCcccccccc
Confidence 3478999999999864 455543222 2344578998888877888887 99988877766653222110011233
Q ss_pred ceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 85 FTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
+ .|. +|+.+|..-.+..|.+-|.++++.+.+
T Consensus 186 L------------------------------e~~-dG~lyanvw~s~~I~vIDp~TG~V~~~ 216 (268)
T 3nok_A 186 L------------------------------ECA-NGVIYANIWHSSDVLEIDPATGTVVGV 216 (268)
T ss_dssp E------------------------------EEE-TTEEEEEETTCSEEEEECTTTCBEEEE
T ss_pred c------------------------------EEe-CCEEEEEECCCCeEEEEeCCCCcEEEE
Confidence 3 665 788788777788999999999988764
No 220
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.81 E-value=0.00067 Score=48.94 Aligned_cols=97 Identities=6% Similarity=0.014 Sum_probs=59.7
Q ss_pred ecCCeEEEEECCCCccceeEecCC-CCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEEeec
Q 032092 5 TADRNLVVFNLQNPQTEFKRINSP-LKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVI 83 (147)
Q Consensus 5 s~dg~v~iwdi~~~~~~~~~~~~~-~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~ 83 (147)
..++.|.+||. +++. ..+..+ ....+..+++.|+|+.+++...++.|.. +|. +++.. .+...... ..+.
T Consensus 117 ~~~~~i~~~d~-~g~~--~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~--~~~-~g~~~-~~~~~~~~---~~~~ 186 (299)
T 2z2n_A 117 MNGNRIGRITD-DGKI--REYELPNKGSYPSFITLGSDNALWFTENQNNAIGR--ITE-SGDIT-EFKIPTPA---SGPV 186 (299)
T ss_dssp TTTTEEEEECT-TCCE--EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE--ECT-TCCEE-EEECSSTT---CCEE
T ss_pred cCCceEEEECC-CCCE--EEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEE--EcC-CCcEE-EeeCCCCC---Ccce
Confidence 45678999998 5432 222211 2235789999999988887777788888 777 44432 22111100 0122
Q ss_pred cceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCce
Q 032092 84 SFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQ 142 (147)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~ 142 (147)
.+ ++.|+|+++++...++.|.+||. +++
T Consensus 187 ~i------------------------------~~~~~g~l~v~~~~~~~i~~~~~-~g~ 214 (299)
T 2z2n_A 187 GI------------------------------TKGNDDALWFVEIIGNKIGRITT-SGE 214 (299)
T ss_dssp EE------------------------------EECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred eE------------------------------EECCCCCEEEEccCCceEEEECC-CCc
Confidence 23 77788877777666777888887 543
No 221
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.80 E-value=0.00057 Score=55.78 Aligned_cols=29 Identities=28% Similarity=0.342 Sum_probs=24.1
Q ss_pred cCCCeEEEeCCCCcEEEeecCCceeeecC
Q 032092 119 QIHHTFATAGSDGAFNFWDKDSKQRLKVF 147 (147)
Q Consensus 119 pdg~~latg~~Dg~i~iWd~~~~~~~~~~ 147 (147)
..+.++..|+.||.++.||.++++.+.+|
T Consensus 495 tagglvf~g~~dg~l~A~D~~tG~~lW~~ 523 (582)
T 1flg_A 495 TAGNLVFTGTGDGYFKAFDAKSGKELWKF 523 (582)
T ss_dssp ETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred eCCCEEEEECCCCcEEEEECCCCCEEEEe
Confidence 34566777899999999999999998764
No 222
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.78 E-value=0.00055 Score=50.66 Aligned_cols=100 Identities=8% Similarity=0.020 Sum_probs=63.4
Q ss_pred EeecCC--eEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEe-eCCeEEEEeecCCCCcceeEEEeccCCceE
Q 032092 3 VGTADR--NLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGS-IEGRVGVHHLDDSQQSKNFTFKCHRDGSET 79 (147)
Q Consensus 3 ~gs~dg--~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~-~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~ 79 (147)
+.+.+| .|+.+|+++++. ..++.-+ .......+.++++.+.... .++.+.+ +|..+.+.+.++....
T Consensus 58 stG~~g~S~v~~vD~~Tgkv-~~~~~l~--~~~FgeGit~~g~~ly~ltw~~~~v~v--~D~~t~~~~~ti~~~~----- 127 (262)
T 3nol_A 58 STGLNGRSSIRKVDIESGKT-LQQIELG--KRYFGEGISDWKDKIVGLTWKNGLGFV--WNIRNLRQVRSFNYDG----- 127 (262)
T ss_dssp EEEETTEEEEEEECTTTCCE-EEEEECC--TTCCEEEEEEETTEEEEEESSSSEEEE--EETTTCCEEEEEECSS-----
T ss_pred ECCCCCCceEEEEECCCCcE-EEEEecC--CccceeEEEEeCCEEEEEEeeCCEEEE--EECccCcEEEEEECCC-----
Confidence 344444 899999999964 3444322 2234444555666665554 4788888 8988888888776311
Q ss_pred EeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceeee
Q 032092 80 CSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLK 145 (147)
Q Consensus 80 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~ 145 (147)
... .+++|++.|..+..++.|.++|.++.+.+.
T Consensus 128 ---eG~------------------------------glt~dg~~L~~SdGs~~i~~iDp~T~~v~~ 160 (262)
T 3nol_A 128 ---EGW------------------------------GLTHNDQYLIMSDGTPVLRFLDPESLTPVR 160 (262)
T ss_dssp ---CCC------------------------------CEEECSSCEEECCSSSEEEEECTTTCSEEE
T ss_pred ---Cce------------------------------EEecCCCEEEEECCCCeEEEEcCCCCeEEE
Confidence 222 556677666665556778888887766554
No 223
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.74 E-value=0.00041 Score=53.99 Aligned_cols=103 Identities=11% Similarity=0.079 Sum_probs=60.7
Q ss_pred EeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCC--eEEEEeecCCCCcceeEEEeccCCceEE
Q 032092 3 VGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEG--RVGVHHLDDSQQSKNFTFKCHRDGSETC 80 (147)
Q Consensus 3 ~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg--~i~i~~~d~~~~~~~~~~~~h~~~~~~~ 80 (147)
+...++.|++||..+++. ..+..... ... ++|+|+++.|++++.++ .|.+ +|...+.....+...... ...
T Consensus 147 ~d~~~~~I~~id~~~g~~--~~~~~~~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~--~d~~~~~~~~~~g~~~~~-~~~ 219 (409)
T 3hrp_A 147 YQRDDPRVRLISVDDNKV--TTVHPGFK-GGK-PAVTKDKQRVYSIGWEGTHTVYV--YMKASGWAPTRIGQLGST-FSG 219 (409)
T ss_dssp EETTTTEEEEEETTTTEE--EEEEETCC-BCB-CEECTTSSEEEEEBSSTTCEEEE--EEGGGTTCEEEEEECCTT-SCS
T ss_pred EecCCCcEEEEECCCCEE--EEeeccCC-CCc-eeEecCCCcEEEEecCCCceEEE--EEcCCCceeEEeeeccch-hcC
Confidence 334568999999987642 22222222 234 99999999998888876 5665 776544332222100000 001
Q ss_pred eeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCce
Q 032092 81 SVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQ 142 (147)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~ 142 (147)
.+..+ +++|++..|..+..++.|+.||.+++.
T Consensus 220 ~p~~i------------------------------av~p~~g~lyv~d~~~~I~~~d~~~~~ 251 (409)
T 3hrp_A 220 KIGAV------------------------------ALDETEEWLYFVDSNKNFGRFNVKTQE 251 (409)
T ss_dssp CCCBC------------------------------EECTTSSEEEEECTTCEEEEEETTTCC
T ss_pred CcEEE------------------------------EEeCCCCeEEEEECCCcEEEEECCCCC
Confidence 23445 889944334446668889999987654
No 224
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.72 E-value=0.00072 Score=52.62 Aligned_cols=114 Identities=9% Similarity=-0.086 Sum_probs=66.6
Q ss_pred EeecCCeEEEEECCCCccceeEe----cCCCCcc--eEEEEEccC-CCEEEEEeeCCeEEEEeecCCCCcceeEEEeccC
Q 032092 3 VGTADRNLVVFNLQNPQTEFKRI----NSPLKYQ--MRCVAAFPD-QQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRD 75 (147)
Q Consensus 3 ~gs~dg~v~iwdi~~~~~~~~~~----~~~~~~~--i~~la~spd-g~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~ 75 (147)
++..++.|+.||..++.. ..+ ....... ...|+|+|+ +..+++-..+++|+. +|.. +. ..++.++..
T Consensus 235 v~d~~~~I~~~d~~~~~~--~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~--~~~~-g~-~~~~~g~~~ 308 (409)
T 3hrp_A 235 FVDSNKNFGRFNVKTQEV--TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYK--ITPD-GE-CEWFCGSAT 308 (409)
T ss_dssp EECTTCEEEEEETTTCCE--EEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEE--ECTT-CC-EEEEEECTT
T ss_pred EEECCCcEEEEECCCCCE--EEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEE--EecC-CC-EEEEEeCCC
Confidence 345567899999987642 122 1111111 139999995 666777777899988 6653 22 334444321
Q ss_pred C-ceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeC-CCCcEEEeecCCcee
Q 032092 76 G-SETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAG-SDGAFNFWDKDSKQR 143 (147)
Q Consensus 76 ~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~-~Dg~i~iWd~~~~~~ 143 (147)
. +. . ++ ......+.....++++|+|+++++-. .++.|+.||..+++.
T Consensus 309 ~~g~---~-----------dg-------~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 309 QKTV---Q-----------DG-------LREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp CCSC---B-----------CE-------EGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE
T ss_pred CCCc---C-----------CC-------cccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE
Confidence 0 00 0 00 00000111223459999999888888 899999999777654
No 225
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.68 E-value=0.0015 Score=48.91 Aligned_cols=96 Identities=8% Similarity=-0.099 Sum_probs=54.4
Q ss_pred EeecCCeEEEEECCCCccceeEecCC----CCcceEEEEEccCCCEEEEEeeC----CeEEEEeecCCCCcceeEEEecc
Q 032092 3 VGTADRNLVVFNLQNPQTEFKRINSP----LKYQMRCVAAFPDQQGFWVGSIE----GRVGVHHLDDSQQSKNFTFKCHR 74 (147)
Q Consensus 3 ~gs~dg~v~iwdi~~~~~~~~~~~~~----~~~~i~~la~spdg~~l~~g~~d----g~i~i~~~d~~~~~~~~~~~~h~ 74 (147)
+++. ..|.+||..+++. ..+... ....+++++++|+|+.+++...+ +...||.+| +++.. .+..+.
T Consensus 105 v~~~-~gl~~~d~~~g~~--~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~ 178 (326)
T 2ghs_A 105 IASD-DGLFLRDTATGVL--TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADI 178 (326)
T ss_dssp EEET-TEEEEEETTTCCE--EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEE
T ss_pred EEEC-CCEEEEECCCCcE--EEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCC
Confidence 3443 4488999987752 222111 11347899999999876654322 233444466 23321 221110
Q ss_pred CCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeE-EEeCCCCcEEEeecC
Q 032092 75 DGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTF-ATAGSDGAFNFWDKD 139 (147)
Q Consensus 75 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~l-atg~~Dg~i~iWd~~ 139 (147)
. ..+.+ +|+|||+.| ++...++.|.+||.+
T Consensus 179 ~-----~~~~i------------------------------~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 179 S-----IPNSI------------------------------CFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp S-----SEEEE------------------------------EECTTSCEEEEEETTTCEEEEEEBC
T ss_pred c-----ccCCe------------------------------EEcCCCCEEEEEECCCCEEEEEEcc
Confidence 0 12233 999999765 455567899999985
No 226
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.68 E-value=0.0015 Score=48.43 Aligned_cols=98 Identities=8% Similarity=-0.090 Sum_probs=63.3
Q ss_pred CCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEE-EEeeCCeEEEEeecCCCCcceeEEEeccCCceEEeeccc
Q 032092 7 DRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFW-VGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVISF 85 (147)
Q Consensus 7 dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~-~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~~ 85 (147)
++.|+++|+.+++. ...+.-+.. .....+.++++.+. +.-.++.+.+ +|..+.+.+.++..- . ....
T Consensus 43 ~s~v~~iD~~tg~v-~~~i~l~~~--~fgeGi~~~g~~lyv~t~~~~~v~v--iD~~t~~v~~~i~~g--~-----~~g~ 110 (266)
T 2iwa_A 43 RSSVRQVALQTGKV-ENIHKMDDS--YFGEGLTLLNEKLYQVVWLKNIGFI--YDRRTLSNIKNFTHQ--M-----KDGW 110 (266)
T ss_dssp TCEEEEEETTTCCE-EEEEECCTT--CCEEEEEEETTEEEEEETTCSEEEE--EETTTTEEEEEEECC--S-----SSCC
T ss_pred CCEEEEEECCCCCE-EEEEecCCC--cceEEEEEeCCEEEEEEecCCEEEE--EECCCCcEEEEEECC--C-----CCeE
Confidence 57999999999864 344432211 12223334455554 4455788888 888877777776521 0 1223
Q ss_pred eeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 86 TSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.++|||+.|..+..++.|.+.|.++.+.+.+
T Consensus 111 ------------------------------glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~ 141 (266)
T 2iwa_A 111 ------------------------------GLATDGKILYGSDGTSILYEIDPHTFKLIKK 141 (266)
T ss_dssp ------------------------------EEEECSSSEEEECSSSEEEEECTTTCCEEEE
T ss_pred ------------------------------EEEECCCEEEEECCCCeEEEEECCCCcEEEE
Confidence 6788987666666788999999988776543
No 227
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.67 E-value=0.00038 Score=51.54 Aligned_cols=103 Identities=14% Similarity=0.067 Sum_probs=69.2
Q ss_pred cCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEEeeccc
Q 032092 6 ADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVISF 85 (147)
Q Consensus 6 ~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~~ 85 (147)
.++.+.+||.++.+. ..++..+. ....+++|++.|+.++.+++|.+ +|+.+.+...++...........++.+
T Consensus 105 ~~~~v~v~D~~t~~~-~~ti~~~~----eG~glt~dg~~L~~SdGs~~i~~--iDp~T~~v~~~I~V~~~g~~~~~lNEL 177 (262)
T 3nol_A 105 KNGLGFVWNIRNLRQ-VRSFNYDG----EGWGLTHNDQYLIMSDGTPVLRF--LDPESLTPVRTITVTAHGEELPELNEL 177 (262)
T ss_dssp SSSEEEEEETTTCCE-EEEEECSS----CCCCEEECSSCEEECCSSSEEEE--ECTTTCSEEEEEECEETTEECCCEEEE
T ss_pred eCCEEEEEECccCcE-EEEEECCC----CceEEecCCCEEEEECCCCeEEE--EcCCCCeEEEEEEeccCCcccccccee
Confidence 478999999999864 45554322 23455588888888776777877 999887777665432111000012223
Q ss_pred eeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 86 TSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.|. +|+.+|..-.+..|.+-|.++++.+.+
T Consensus 178 ------------------------------e~~-~G~lyan~w~~~~I~vIDp~tG~V~~~ 207 (262)
T 3nol_A 178 ------------------------------EWV-DGEIFANVWQTNKIVRIDPETGKVTGI 207 (262)
T ss_dssp ------------------------------EEE-TTEEEEEETTSSEEEEECTTTCBEEEE
T ss_pred ------------------------------EEE-CCEEEEEEccCCeEEEEECCCCcEEEE
Confidence 665 788788777788999999999988754
No 228
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.66 E-value=0.00072 Score=50.93 Aligned_cols=74 Identities=3% Similarity=0.066 Sum_probs=47.9
Q ss_pred eEEEEEccCCCEEEEEeeCCeEEEEeecCCC---Cc-----ce--eEEEeccCCceEEeeccceeeeecCCCcceeeeee
Q 032092 33 MRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQ---QS-----KN--FTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKV 102 (147)
Q Consensus 33 i~~la~spdg~~l~~g~~dg~i~i~~~d~~~---~~-----~~--~~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 102 (147)
+..|+++|||+.|.++..++. ++|.++... +. .. ....++.. .++.+
T Consensus 197 ~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g-----~pdgi----------------- 253 (343)
T 2qe8_A 197 VNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKIERYSEKP-----ICDGI----------------- 253 (343)
T ss_dssp EEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEEEEECC-----SCSCE-----------------
T ss_pred cceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEecccCC-----CCceE-----------------
Confidence 578999999998888877764 344465321 10 00 01112211 13344
Q ss_pred eeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCce
Q 032092 103 KRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQ 142 (147)
Q Consensus 103 ~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~ 142 (147)
++.|+|+++++...++.|.+||.++++
T Consensus 254 -------------a~d~~G~l~va~~~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 254 -------------SIDKDHNIYVGDLAHSAIGVITSADRA 280 (343)
T ss_dssp -------------EECTTCCEEEEEGGGTEEEEEETTTTE
T ss_pred -------------EECCCCCEEEEccCCCeEEEEECCCCC
Confidence 999999999998889999999985554
No 229
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.65 E-value=0.00023 Score=59.14 Aligned_cols=73 Identities=8% Similarity=-0.015 Sum_probs=50.7
Q ss_pred cceEEEEEccCCCEEEEEeeC-C----eEEEEeecCCCCcceeEEEeccCCceEEeeccceeeeecCCCcceeeeeeeee
Q 032092 31 YQMRCVAAFPDQQGFWVGSIE-G----RVGVHHLDDSQQSKNFTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRL 105 (147)
Q Consensus 31 ~~i~~la~spdg~~l~~g~~d-g----~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 105 (147)
..+..++|||||++||.++.+ | +|++ ||+.+++.... ..+. ....+.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v--~dl~tg~~~~~-~~~~-----~~~~~~-------------------- 214 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKF--VGVADGKPLAD-ELKW-----VKFSGL-------------------- 214 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEE--EETTTCCEEEE-EEEE-----EESCCC--------------------
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEE--EECCCCCCCCc-cCCC-----ceeccE--------------------
Confidence 357889999999999987664 3 4777 78776655321 1111 112344
Q ss_pred eeeeeceEEEEEecCCCeEEEeCCCCc--------------EEEeecCCce
Q 032092 106 HLFVKSHVIVLFVQIHHTFATAGSDGA--------------FNFWDKDSKQ 142 (147)
Q Consensus 106 ~~~~~~~~~~~fspdg~~latg~~Dg~--------------i~iWd~~~~~ 142 (147)
+|+|| +.|+.++.|+. |++|++.+++
T Consensus 215 ----------~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~ 254 (741)
T 1yr2_A 215 ----------AWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQ 254 (741)
T ss_dssp ----------EESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCG
T ss_pred ----------EEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCc
Confidence 99999 98888877654 8999987654
No 230
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.64 E-value=0.0008 Score=49.66 Aligned_cols=55 Identities=7% Similarity=-0.078 Sum_probs=37.4
Q ss_pred eEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCC
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDS 62 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~ 62 (147)
+++..++.|..||. +++. ..+..+ ...+..++++|+|+.+++...++.|.+ +|..
T Consensus 61 ~~d~~~~~i~~~~~-~g~~--~~~~~~-~~~~~gl~~d~dG~l~v~~~~~~~v~~--~~~~ 115 (305)
T 3dr2_A 61 WSDLVGRRVLGWRE-DGTV--DVLLDA-TAFTNGNAVDAQQRLVHCEHGRRAITR--SDAD 115 (305)
T ss_dssp EEETTTTEEEEEET-TSCE--EEEEES-CSCEEEEEECTTSCEEEEETTTTEEEE--ECTT
T ss_pred EEECCCCEEEEEeC-CCCE--EEEeCC-CCccceeeECCCCCEEEEECCCCEEEE--ECCC
Confidence 45566789999998 4432 222222 234789999999997776666688888 6664
No 231
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.64 E-value=0.00096 Score=55.18 Aligned_cols=32 Identities=13% Similarity=0.182 Sum_probs=27.2
Q ss_pred EEecCCCeEEEeCCCCcEEEeecCCceeeecC
Q 032092 116 LFVQIHHTFATAGSDGAFNFWDKDSKQRLKVF 147 (147)
Q Consensus 116 ~fspdg~~latg~~Dg~i~iWd~~~~~~~~~~ 147 (147)
.+...+.+++.|+.||.++.||.++++.+..|
T Consensus 464 ~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~ 495 (668)
T 1kv9_A 464 TLSTAGNLVFQGTAAGQMHAYSADKGEALWQF 495 (668)
T ss_dssp EEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred eeEeCCCEEEEECCcccchhhhhhcChhheEe
Confidence 56667788888999999999999999988653
No 232
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.60 E-value=0.0014 Score=48.00 Aligned_cols=104 Identities=13% Similarity=0.071 Sum_probs=68.5
Q ss_pred ecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEEeecc
Q 032092 5 TADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVIS 84 (147)
Q Consensus 5 s~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~ 84 (147)
-.++.+.+||.++.+. ..++..+.. ...+.+|++.|..+..+++|.+ +|+.+.+...+++...+......++.
T Consensus 82 w~~~~v~v~D~~tl~~-~~ti~~~~~----Gwglt~dg~~L~vSdgs~~l~~--iDp~t~~~~~~I~V~~~g~~~~~lNe 154 (243)
T 3mbr_X 82 WRNHEGFVYDLATLTP-RARFRYPGE----GWALTSDDSHLYMSDGTAVIRK--LDPDTLQQVGSIKVTAGGRPLDNLNE 154 (243)
T ss_dssp SSSSEEEEEETTTTEE-EEEEECSSC----CCEEEECSSCEEEECSSSEEEE--ECTTTCCEEEEEECEETTEECCCEEE
T ss_pred eeCCEEEEEECCcCcE-EEEEeCCCC----ceEEeeCCCEEEEECCCCeEEE--EeCCCCeEEEEEEEccCCccccccee
Confidence 3478999999999863 455543322 2345578888888777888887 99988777766643221100001222
Q ss_pred ceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 85 FTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
+ .|. +|+.+|..-.+..|.+-|.++++.+..
T Consensus 155 L------------------------------e~~-~G~lyanvw~s~~I~vIDp~tG~V~~~ 185 (243)
T 3mbr_X 155 L------------------------------EWV-NGELLANVWLTSRIARIDPASGKVVAW 185 (243)
T ss_dssp E------------------------------EEE-TTEEEEEETTTTEEEEECTTTCBEEEE
T ss_pred e------------------------------EEe-CCEEEEEECCCCeEEEEECCCCCEEEE
Confidence 2 443 777777776777899999999988754
No 233
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.59 E-value=0.0026 Score=46.56 Aligned_cols=96 Identities=9% Similarity=0.047 Sum_probs=63.1
Q ss_pred CeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEE-EEeeCCeEEEEeecCCCCcceeEEEeccCCceEEeeccce
Q 032092 8 RNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFW-VGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVISFT 86 (147)
Q Consensus 8 g~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~-~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~~~ 86 (147)
..|+.+|+++++. ..++.-+. ......+.++++.+. ..-.++.+.+ +|..+.+.+.++..- ....
T Consensus 43 S~v~~vD~~tgkv-~~~~~l~~--~~fgeGi~~~~~~ly~ltw~~~~v~v--~D~~tl~~~~ti~~~--------~~Gw- 108 (243)
T 3mbr_X 43 SSVRKVDLETGRI-LQRAEVPP--PYFGAGIVAWRDRLIQLTWRNHEGFV--YDLATLTPRARFRYP--------GEGW- 108 (243)
T ss_dssp CEEEEEETTTCCE-EEEEECCT--TCCEEEEEEETTEEEEEESSSSEEEE--EETTTTEEEEEEECS--------SCCC-
T ss_pred ceEEEEECCCCCE-EEEEeCCC--CcceeEEEEeCCEEEEEEeeCCEEEE--EECCcCcEEEEEeCC--------CCce-
Confidence 4899999999964 34443221 233344444455544 4445788888 898888888777631 1223
Q ss_pred eeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 87 SILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.+++|++.|..+..++.|.++|.++.+.+.+
T Consensus 109 -----------------------------glt~dg~~L~vSdgs~~l~~iDp~t~~~~~~ 139 (243)
T 3mbr_X 109 -----------------------------ALTSDDSHLYMSDGTAVIRKLDPDTLQQVGS 139 (243)
T ss_dssp -----------------------------EEEECSSCEEEECSSSEEEEECTTTCCEEEE
T ss_pred -----------------------------EEeeCCCEEEEECCCCeEEEEeCCCCeEEEE
Confidence 6667887666666788899999988776653
No 234
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.59 E-value=0.0025 Score=48.09 Aligned_cols=104 Identities=10% Similarity=0.074 Sum_probs=63.9
Q ss_pred eEeecCCeEEEEECCCCccceeEecCCC--------CcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEec
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINSPL--------KYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCH 73 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~~~--------~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h 73 (147)
.+++.++.|..+|.++++..-. ...+. ...+.+ ....++..+.+++.+|.+.. +|..+++....+...
T Consensus 57 ~~~~~~g~v~a~d~~tG~~~W~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a--~d~~tG~~~W~~~~~ 132 (376)
T 3q7m_A 57 YAADRAGLVKALNADDGKEIWS-VSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYA--LNTSDGTVAWQTKVA 132 (376)
T ss_dssp EEECTTSEEEEEETTTCCEEEE-EECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEE--EETTTCCEEEEEECS
T ss_pred EEEcCCCeEEEEEccCCceeee-ecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEE--EECCCCCEEEEEeCC
Confidence 5667789999999999864322 22111 112222 11224678888899999988 898888887766533
Q ss_pred cCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 74 RDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 74 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.. +.+. +... +..++.++.++.+..+|.++++.+.+
T Consensus 133 ~~------~~~~-----------------------------p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~ 168 (376)
T 3q7m_A 133 GE------ALSR-----------------------------PVVS--DGLVLIHTSNGQLQALNEADGAVKWT 168 (376)
T ss_dssp SC------CCSC-----------------------------CEEE--TTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred Cc------eEcC-----------------------------CEEE--CCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 21 1111 0221 23566667788888888888776654
No 235
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.56 E-value=0.0011 Score=55.00 Aligned_cols=111 Identities=9% Similarity=0.175 Sum_probs=71.6
Q ss_pred CCeEEEEECCCCccceeEecCCCC------------------------------cceEEEEEccCCCEEEEEeeCC----
Q 032092 7 DRNLVVFNLQNPQTEFKRINSPLK------------------------------YQMRCVAAFPDQQGFWVGSIEG---- 52 (147)
Q Consensus 7 dg~v~iwdi~~~~~~~~~~~~~~~------------------------------~~i~~la~spdg~~l~~g~~dg---- 52 (147)
+|.|+.||.++++..-+....+.. .....++++|+++.+.+++.++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 689999999999753222111110 0113578999999988887765
Q ss_pred ---------------eEEEEeecCCCCcceeEEEeccCCceEEe-eccceeeeecCCCcceeeeeeeeeeeeeeceEEEE
Q 032092 53 ---------------RVGVHHLDDSQQSKNFTFKCHRDGSETCS-VISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVL 116 (147)
Q Consensus 53 ---------------~i~i~~~d~~~~~~~~~~~~h~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (147)
.|.. +|.++|+....++........+. ..+. ..+.
T Consensus 269 ~~~~~~~~gd~~~~~sv~A--lD~~TG~~~W~~~~~~~d~wd~~~~~~p---------------------------~l~~ 319 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVA--LDPDTGKYKWHYQETPGDNWDYTSTQPM---------------------------ILAD 319 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEE--ECTTTCCEEEEEESSTTCCSCCCCCSCC---------------------------EEEE
T ss_pred CCCCCccCCCCeeeEEEEE--EECCCCCEEEEEecCCCcccccccCCCc---------------------------EEEe
Confidence 3666 89999998888764221100000 0110 0013
Q ss_pred EecCC---CeEEEeCCCCcEEEeecCCceeeec
Q 032092 117 FVQIH---HTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 117 fspdg---~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
...+| +.++.++.+|.++++|.++++.+..
T Consensus 320 ~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~ 352 (677)
T 1kb0_A 320 IKIAGKPRKVILHAPKNGFFFVLDRTNGKFISA 352 (677)
T ss_dssp EEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred cccCCcEeeEEEEECCCCEEEEEECCCCCEecc
Confidence 44577 6899999999999999999998754
No 236
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.55 E-value=0.0023 Score=46.07 Aligned_cols=53 Identities=9% Similarity=0.210 Sum_probs=37.2
Q ss_pred ecCCeEEEEECCCCccceeEecCC-CCcceEEEEEccCCCEEEEEeeCCeEEEEeecCC
Q 032092 5 TADRNLVVFNLQNPQTEFKRINSP-LKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDS 62 (147)
Q Consensus 5 s~dg~v~iwdi~~~~~~~~~~~~~-~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~ 62 (147)
..++.|.+||.. ++. ..+..+ ....+..|++.|+|+.+++...++.|.. +|..
T Consensus 38 ~~~~~v~~~~~~-~~~--~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~--~d~~ 91 (300)
T 2qc5_A 38 HKANKISSLDQS-GRI--KEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGK--LSKK 91 (300)
T ss_dssp TTTTEEEEECTT-SCE--EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE--ECTT
T ss_pred CCCCeEEEECCC-Cce--EEEECCCCCCcceeEEECCCCCEEEEecCCCeEEE--ECCC
Confidence 357889999988 532 222222 1235889999999998887777888888 7775
No 237
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.51 E-value=0.0039 Score=44.85 Aligned_cols=52 Identities=8% Similarity=0.011 Sum_probs=36.5
Q ss_pred cCCeEEEEECCCCccceeEecCC-CCcceEEEEEccCCCEEEEEeeCCeEEEEeecCC
Q 032092 6 ADRNLVVFNLQNPQTEFKRINSP-LKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDS 62 (147)
Q Consensus 6 ~dg~v~iwdi~~~~~~~~~~~~~-~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~ 62 (147)
.++.|..||.. ++. ..+..+ ....+.++++.|+|+.+++...++.|.. +|..
T Consensus 81 ~~~~v~~~d~~-g~~--~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~--~~~~ 133 (300)
T 2qc5_A 81 GANKIGKLSKK-GGF--TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGK--LTAD 133 (300)
T ss_dssp TTTEEEEECTT-SCE--EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEE--ECTT
T ss_pred CCCeEEEECCC-CCe--EEecCCCCCCCCccceECCCCCEEEEccCCCeEEE--ECCC
Confidence 46789999988 532 222211 2245889999999998888777888887 7765
No 238
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.48 E-value=0.0033 Score=47.46 Aligned_cols=108 Identities=7% Similarity=0.079 Sum_probs=65.0
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETC 80 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~ 80 (147)
|.+++.++.|..+|.++++..- +...... ...+..+. +..+++++.+|.+.. +|.++++....+..........
T Consensus 106 v~v~~~~g~l~a~d~~tG~~~W-~~~~~~~-~~~~p~~~--~~~v~v~~~~g~l~~--~d~~tG~~~W~~~~~~~~~~~~ 179 (376)
T 3q7m_A 106 VYIGSEKAQVYALNTSDGTVAW-QTKVAGE-ALSRPVVS--DGLVLIHTSNGQLQA--LNEADGAVKWTVNLDMPSLSLR 179 (376)
T ss_dssp EEEEETTSEEEEEETTTCCEEE-EEECSSC-CCSCCEEE--TTEEEEECTTSEEEE--EETTTCCEEEEEECCC-----C
T ss_pred EEEEcCCCEEEEEECCCCCEEE-EEeCCCc-eEcCCEEE--CCEEEEEcCCCeEEE--EECCCCcEEEEEeCCCCceeec
Confidence 3567889999999999986432 2221111 11111222 557888899999988 8998888877765322100000
Q ss_pred eeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 81 SVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
..... ... +..+..+..++.+..+|.++++.+.+
T Consensus 180 ~~~~~------------------------------~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~ 213 (376)
T 3q7m_A 180 GESAP------------------------------TTA--FGAAVVGGDNGRVSAVLMEQGQMIWQ 213 (376)
T ss_dssp CCCCC------------------------------EEE--TTEEEECCTTTEEEEEETTTCCEEEE
T ss_pred CCCCc------------------------------EEE--CCEEEEEcCCCEEEEEECCCCcEEEE
Confidence 00111 222 34566777888999999988887654
No 239
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.44 E-value=0.00042 Score=57.27 Aligned_cols=45 Identities=11% Similarity=0.260 Sum_probs=29.9
Q ss_pred ecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCe
Q 032092 5 TADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGR 53 (147)
Q Consensus 5 s~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~ 53 (147)
++...|++||+.+++.....+. .....+++|+ ||+.|+.++.+..
T Consensus 152 ~~~~~i~v~dl~tg~~~~~~~~---~~k~~~~~Ws-Dg~~l~y~~~~~~ 196 (693)
T 3iuj_A 152 SDWREIHLMDVESKQPLETPLK---DVKFSGISWL-GNEGFFYSSYDKP 196 (693)
T ss_dssp CCEEEEEEEETTTCSEEEEEEE---EEESCCCEEE-TTTEEEEEESSCC
T ss_pred CceEEEEEEECCCCCCCccccC---CceeccEEEe-CCCEEEEEEecCc
Confidence 3446899999999863211111 0113578999 9999999887743
No 240
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.43 E-value=0.0029 Score=51.88 Aligned_cols=30 Identities=20% Similarity=0.142 Sum_probs=24.5
Q ss_pred ecCCCeEEEeCCCCcEEEeecCCceeeecC
Q 032092 118 VQIHHTFATAGSDGAFNFWDKDSKQRLKVF 147 (147)
Q Consensus 118 spdg~~latg~~Dg~i~iWd~~~~~~~~~~ 147 (147)
...+.++..|+.||.++.+|.++++.+.+|
T Consensus 481 ~tagg~vf~gt~dg~l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 481 ATAGDLVFYGTLDGYLKARDSDTGDLLWKF 510 (599)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EecCCEEEEECCCCeEEEEECCCCCEEEEe
Confidence 335566677899999999999999998764
No 241
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.41 E-value=0.0024 Score=47.77 Aligned_cols=57 Identities=11% Similarity=0.065 Sum_probs=38.1
Q ss_pred eEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcc
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSK 66 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~ 66 (147)
+++..++.|..||..+++. ..+.. ...+.+++++|+|+.+++. . +.|.+ +|..+++.
T Consensus 65 ~~d~~~~~i~~~d~~~~~~--~~~~~--~~~v~~i~~~~dg~l~v~~-~-~gl~~--~d~~~g~~ 121 (326)
T 2ghs_A 65 WFNILERELHELHLASGRK--TVHAL--PFMGSALAKISDSKQLIAS-D-DGLFL--RDTATGVL 121 (326)
T ss_dssp EEEGGGTEEEEEETTTTEE--EEEEC--SSCEEEEEEEETTEEEEEE-T-TEEEE--EETTTCCE
T ss_pred EEECCCCEEEEEECCCCcE--EEEEC--CCcceEEEEeCCCeEEEEE-C-CCEEE--EECCCCcE
Confidence 3455678999999988642 22322 2358999999999876654 4 44766 77765543
No 242
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.29 E-value=0.0016 Score=48.00 Aligned_cols=27 Identities=7% Similarity=0.030 Sum_probs=20.8
Q ss_pred EEEecCCCeEEEeCCC------CcEEEeecCCc
Q 032092 115 VLFVQIHHTFATAGSD------GAFNFWDKDSK 141 (147)
Q Consensus 115 ~~fspdg~~latg~~D------g~i~iWd~~~~ 141 (147)
++|+|||+.|+.+..+ +.|.+||+..+
T Consensus 193 l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 193 LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp EEECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred eEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 3999999877666554 68999998643
No 243
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.28 E-value=0.0016 Score=54.10 Aligned_cols=138 Identities=10% Similarity=0.063 Sum_probs=70.5
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCC-CCcceEEEEEcc--CCCEEEEEe------eCCeEEEEeecCCCCcceeEEE
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSP-LKYQMRCVAAFP--DQQGFWVGS------IEGRVGVHHLDDSQQSKNFTFK 71 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~-~~~~i~~la~sp--dg~~l~~g~------~dg~i~i~~~d~~~~~~~~~~~ 71 (147)
|++++.|+.|..+|.++++..-+ .... .......+..+| .+..+++++ .+|.|.. +|.++|+.+.++.
T Consensus 124 v~v~~~dg~l~AlDa~TG~~~W~-~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a--~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 124 VYVGVLDGRLEAIDAKTGQRAWS-VDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTA--YDAETGKEAWRFY 200 (689)
T ss_dssp EEEECTTSEEEEEETTTCCEEEE-EECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEE--EETTTCCEEEEEE
T ss_pred EEEEccCCEEEEEECCCCCEeee-ecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEE--EECCCCcEEEEec
Confidence 35778899999999999975322 2211 100001111122 134555554 3788988 9999999988775
Q ss_pred eccCCceEEeeccceeeee-cC-CCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCc-----------------
Q 032092 72 CHRDGSETCSVISFTSILA-GD-APKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGA----------------- 132 (147)
Q Consensus 72 ~h~~~~~~~~v~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~----------------- 132 (147)
.-..... .....-.+..+ .. ....+.....-...+ ..+++.|++.+++.+..++.
T Consensus 201 ~~~~~p~-~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w-----~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~ 274 (689)
T 1yiq_A 201 TVPGDPK-LPPEGKGMEIAAKTWFGDAYVEQGGGGTAW-----DSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFL 274 (689)
T ss_dssp SSCCCTT-SCCCSHHHHHHHTTCCSSTHHHHCEECCCC-----SCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTT
T ss_pred ccCCCcc-cccccccccccccccCCceeeecCCCCccc-----cceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceee
Confidence 2110000 00000000000 00 000000000000000 02389998888888888764
Q ss_pred --EEEeecCCceeeecC
Q 032092 133 --FNFWDKDSKQRLKVF 147 (147)
Q Consensus 133 --i~iWd~~~~~~~~~~ 147 (147)
|..||.++++.+..|
T Consensus 275 ~~v~AlD~~TG~~~W~~ 291 (689)
T 1yiq_A 275 SSIVAVNADTGEYVWHY 291 (689)
T ss_dssp TEEEEEETTTCCEEEEE
T ss_pred eeEEEEEccCCceeEee
Confidence 999999999987653
No 244
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.26 E-value=0.001 Score=55.02 Aligned_cols=72 Identities=11% Similarity=0.000 Sum_probs=48.8
Q ss_pred cceEEEEEccCCCEEEEEe-----eCCeEEEEeecCCCCcceeE-EEeccCCceEEeeccceeeeecCCCcceeeeeeee
Q 032092 31 YQMRCVAAFPDQQGFWVGS-----IEGRVGVHHLDDSQQSKNFT-FKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKR 104 (147)
Q Consensus 31 ~~i~~la~spdg~~l~~g~-----~dg~i~i~~~d~~~~~~~~~-~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 104 (147)
..+..++|||||+++|.+. .+.+|++ +|+.+++.+.. +... ...+.
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v--~dl~tg~~~~~~~~~~-------k~~~~------------------- 180 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGSDWREIHL--MDVESKQPLETPLKDV-------KFSGI------------------- 180 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCCEEEEEE--EETTTCSEEEEEEEEE-------ESCCC-------------------
T ss_pred EEEEEEEECCCCCEEEEEEecCCCceEEEEE--EECCCCCCCccccCCc-------eeccE-------------------
Confidence 3578899999999998543 2345777 78877764321 1110 02344
Q ss_pred eeeeeeceEEEEEecCCCeEEEeCCCCc-------------EEEeecCCce
Q 032092 105 LHLFVKSHVIVLFVQIHHTFATAGSDGA-------------FNFWDKDSKQ 142 (147)
Q Consensus 105 ~~~~~~~~~~~~fspdg~~latg~~Dg~-------------i~iWd~~~~~ 142 (147)
+|+ ||+.|+-++.|.. |++|++.+..
T Consensus 181 -----------~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~ 219 (693)
T 3iuj_A 181 -----------SWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQ 219 (693)
T ss_dssp -----------EEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCG
T ss_pred -----------EEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCc
Confidence 999 9998888877743 9999987653
No 245
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.21 E-value=0.0059 Score=48.58 Aligned_cols=54 Identities=6% Similarity=0.110 Sum_probs=37.2
Q ss_pred CCeEEEEECCCCccceeEecCCCC-cceEEEEE--ccCCCEEEEEe------eCCeEEEEeecC
Q 032092 7 DRNLVVFNLQNPQTEFKRINSPLK-YQMRCVAA--FPDQQGFWVGS------IEGRVGVHHLDD 61 (147)
Q Consensus 7 dg~v~iwdi~~~~~~~~~~~~~~~-~~i~~la~--spdg~~l~~g~------~dg~i~i~~~d~ 61 (147)
+.+|.+||+.+++ ..+++.-+.. ...+.|.| +|++++..+++ .+++|.+|.+|.
T Consensus 227 ~d~V~v~D~~~~k-~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~ 289 (462)
T 2ece_A 227 GNRIHFWDLRKRK-RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED 289 (462)
T ss_dssp CCEEEEEETTTTE-EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET
T ss_pred CCEEEEEECCCCc-EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC
Confidence 6899999999874 4555543211 23456656 99999876665 577898877764
No 246
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.17 E-value=0.0051 Score=45.04 Aligned_cols=135 Identities=13% Similarity=0.079 Sum_probs=72.3
Q ss_pred eEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEEe
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCS 81 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~ 81 (147)
.+|+.++.|..+|.. ++.. ..... ....+.++...+++. +.+|+.++.+.. +|.. ++....+...........
T Consensus 111 ~v~t~~~~l~~~d~~-g~~~-~~~~~-~~~~~~~~~~~~~g~-l~vgt~~~~l~~--~d~~-g~~~~~~~~~~~~~~~~~ 183 (330)
T 3hxj_A 111 YVTSMDGHLYAINTD-GTEK-WRFKT-KKAIYATPIVSEDGT-IYVGSNDNYLYA--INPD-GTEKWRFKTNDAITSAAS 183 (330)
T ss_dssp EEECTTSEEEEECTT-SCEE-EEEEC-SSCCCSCCEECTTSC-EEEECTTSEEEE--ECTT-SCEEEEEECSSCCCSCCE
T ss_pred EEEecCCEEEEEcCC-CCEE-EEEcC-CCceeeeeEEcCCCE-EEEEcCCCEEEE--ECCC-CCEeEEEecCCCceeeeE
Confidence 567788999999998 6432 22222 222356677777776 556777888888 8887 666655543221111011
Q ss_pred eccceeeeecCCCcceeeeeeeeeeeee----eceEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 82 VISFTSILAGDAPKYSSFYKVKRLHLFV----KSHVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
+.....+-.+. ..+..+..-.+..+.. ....+++..++|++++ ++.++.+..+| .+++.+..
T Consensus 184 ~d~~g~l~v~t-~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~~gl~~~~-~~g~~~~~ 249 (330)
T 3hxj_A 184 IGKDGTIYFGS-DKVYAINPDGTEKWNFYAGYWTVTRPAISEDGTIYV-TSLDGHLYAIN-PDGTEKWR 249 (330)
T ss_dssp ECTTCCEEEES-SSEEEECTTSCEEEEECCSSCCCSCCEECTTSCEEE-EETTTEEEEEC-TTSCEEEE
T ss_pred EcCCCEEEEEe-CEEEEECCCCcEEEEEccCCcceeceEECCCCeEEE-EcCCCeEEEEC-CCCCEeEE
Confidence 11111122222 3322222111111111 1123457777776544 55689999996 77777654
No 247
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.96 E-value=0.0015 Score=53.61 Aligned_cols=105 Identities=14% Similarity=0.094 Sum_probs=59.5
Q ss_pred CeEEEEECCC--CccceeEecCCCCcceEEEEEccCCCEEEE-EeeCCeEEEEeecCCCCcceeEEEeccCCceEEeecc
Q 032092 8 RNLVVFNLQN--PQTEFKRINSPLKYQMRCVAAFPDQQGFWV-GSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVIS 84 (147)
Q Consensus 8 g~v~iwdi~~--~~~~~~~~~~~~~~~i~~la~spdg~~l~~-g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~ 84 (147)
+.|.+.|.++ ++.....+..+ ....++.++|||+++++ +-.+++|.+ +|..+.+.. +.+ +.. ...
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg--~~PhGv~~sPDGk~v~V~~~~s~~VsV--id~~~~~~~--~~~-~l~-----~~~ 321 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIA--NNPHGCNMAPDKKHLCVAGKLSPTVTV--LDVTRFDAV--FYE-NAD-----PRS 321 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEE--SSCCCEEECTTSSEEEEECTTSSBEEE--EEGGGHHHH--HHS-CCC-----GGG
T ss_pred CcEEEEeCcccCCceeEEEEecC--CCceEEEEcCCCCEEEEeCCCCCeEEE--EECcccccc--ccc-ccC-----ccc
Confidence 4589999998 43212333222 23568999999997654 557899999 665432111 000 000 000
Q ss_pred ceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCC
Q 032092 85 FTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDS 140 (147)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~ 140 (147)
. +. .....-.+...++|+|||+...+.--|+.|..||+++
T Consensus 322 ~------------v~----~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 322 A------------VV----AEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp G------------EE----ECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred c------------eE----EEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 0 00 0000111223449999995556677799999999876
No 248
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.87 E-value=0.0028 Score=51.97 Aligned_cols=58 Identities=12% Similarity=0.086 Sum_probs=40.2
Q ss_pred eEeecCCeEEEEECCCCcc-----------ceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecC
Q 032092 2 VVGTADRNLVVFNLQNPQT-----------EFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDD 61 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~-----------~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~ 61 (147)
+++-.+.+|.++|+.+.+. ....+. .....+-++|+|||..+.+.-.|++|.+|+++.
T Consensus 293 V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~--vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 293 VAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE--LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB--CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred EeCCCCCeEEEEECcccccccccccCcccceEEEcC--CCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 4555678999999996531 111221 122468899999996677888899999966654
No 249
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.85 E-value=0.022 Score=46.99 Aligned_cols=83 Identities=12% Similarity=0.161 Sum_probs=54.6
Q ss_pred EEEEccCCCEEEEEeeCCe-------------------EEEEeecCCCCcceeEEEeccCCceEEeeccceeeeecCCCc
Q 032092 35 CVAAFPDQQGFWVGSIEGR-------------------VGVHHLDDSQQSKNFTFKCHRDGSETCSVISFTSILAGDAPK 95 (147)
Q Consensus 35 ~la~spdg~~l~~g~~dg~-------------------i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~~~~~~~~~~~~ 95 (147)
++++.|+.+.+.+++.++. |.. +|.++|+....++........+...+- .+
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~A--lD~~tG~~~W~~~~~~~~~wd~~~~~~-~~------- 303 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILA--IRPDTGKLAWHYQVTPGDSWDFTATQQ-IT------- 303 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE--ECTTTCCEEEEEESSTTCCSCCCCCSC-EE-------
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE--EcCCCCceeeEeecCCCccccccCCCC-cE-------
Confidence 4788998888888887764 666 899999988887642111000000000 00
Q ss_pred ceeeeeeeeeeeeeeceEEEEEecCCC---eEEEeCCCCcEEEeecCCceeee
Q 032092 96 YSSFYKVKRLHLFVKSHVIVLFVQIHH---TFATAGSDGAFNFWDKDSKQRLK 145 (147)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~fspdg~---~latg~~Dg~i~iWd~~~~~~~~ 145 (147)
...+..+|+ .++.++.+|.++++|.++++.+.
T Consensus 304 ------------------~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~ 338 (668)
T 1kv9_A 304 ------------------LAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLIS 338 (668)
T ss_dssp ------------------EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred ------------------EEEeccCCcEEEEEEEECCCCEEEEEECCCCCEec
Confidence 003334664 68999999999999999999873
No 250
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.84 E-value=0.0055 Score=46.03 Aligned_cols=83 Identities=7% Similarity=-0.047 Sum_probs=53.9
Q ss_pred cceEEEEEccCCCEEEEEee-----CCeEEEEeecCCCCcceeEEEeccCCc-eEEeeccceeeeecCCCcceeeeeeee
Q 032092 31 YQMRCVAAFPDQQGFWVGSI-----EGRVGVHHLDDSQQSKNFTFKCHRDGS-ETCSVISFTSILAGDAPKYSSFYKVKR 104 (147)
Q Consensus 31 ~~i~~la~spdg~~l~~g~~-----dg~i~i~~~d~~~~~~~~~~~~h~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~ 104 (147)
..+..|+++|+|+.+++-.. +++|.+ ||+.+++.+.++....... ....++.+
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~--~d~~tg~~~~~~~~~~~~~~~~~~~~~v------------------- 125 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVA--WDTLNNQLSRVIYLPPPITLSNSFVNDL------------------- 125 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEE--EETTTTEEEEEEECCTTTSCTTCCCCEE-------------------
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEE--EECCCCeEEEEEECChhhcccccccceE-------------------
Confidence 35889999999987776544 578877 8887777655554321100 00012333
Q ss_pred eeeeeeceEEEEEecCC-CeEEEeC---CCCcEEEeecCCceeee
Q 032092 105 LHLFVKSHVIVLFVQIH-HTFATAG---SDGAFNFWDKDSKQRLK 145 (147)
Q Consensus 105 ~~~~~~~~~~~~fspdg-~~latg~---~Dg~i~iWd~~~~~~~~ 145 (147)
++.|++ ..+++.. .++.|.+||.++++..+
T Consensus 126 -----------~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r 159 (343)
T 2qe8_A 126 -----------AVDLIHNFVYISDPAPDDKAALIRVDLQTGLAAR 159 (343)
T ss_dssp -----------EEETTTTEEEEEECCSGGGCEEEEEETTTCCEEE
T ss_pred -----------EEecCCCEEEEEcCccCCCCeEEEEECCCCCEEE
Confidence 899864 5556665 67899999998776543
No 251
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.83 E-value=0.021 Score=43.60 Aligned_cols=102 Identities=13% Similarity=0.126 Sum_probs=65.5
Q ss_pred CCeEEEEECC---CCccceeEecCC-----------CCcceEEEEEccCCCEEEEEeeC-CeEEEEeecCCCCcceeEEE
Q 032092 7 DRNLVVFNLQ---NPQTEFKRINSP-----------LKYQMRCVAAFPDQQGFWVGSIE-GRVGVHHLDDSQQSKNFTFK 71 (147)
Q Consensus 7 dg~v~iwdi~---~~~~~~~~~~~~-----------~~~~i~~la~spdg~~l~~g~~d-g~i~i~~~d~~~~~~~~~~~ 71 (147)
+..|..||+. +++.....-... .......|++.++|+.+++++.- +.|.. +++. ++....+-
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~r--V~pd-G~~~~~~~ 175 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIAR--VSAD-GKTVSTFA 175 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEE--ECTT-SCCEEEEE
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEE--EeCC-CCEEeeee
Confidence 6789999999 665432211100 11247899999999999999998 88866 7765 34333332
Q ss_pred -eccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCCc
Q 032092 72 -CHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDSK 141 (147)
Q Consensus 72 -~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~~ 141 (147)
...+.......+. ++++|||++|+....+|.+.-+|+.+.
T Consensus 176 ~~~~~~~~~~G~nG------------------------------Iv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 176 WESGNGGQRPGYSG------------------------------ITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp ECCCCSSSCCSCSE------------------------------EEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred ecCCCcccccCcce------------------------------EEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 1111100011233 399999988888877999999997743
No 252
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.81 E-value=0.0052 Score=51.38 Aligned_cols=53 Identities=13% Similarity=0.094 Sum_probs=32.1
Q ss_pred CeEEEEECCCC-ccceeEecCCCCcceEEEEEccCCCEEEEEeeCC--e-EEEEeecCCCC
Q 032092 8 RNLVVFNLQNP-QTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEG--R-VGVHHLDDSQQ 64 (147)
Q Consensus 8 g~v~iwdi~~~-~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg--~-i~i~~~d~~~~ 64 (147)
.+|+++|+.++ +.....+. .....++|+|||+.|+....|. . -.||.+++.++
T Consensus 201 ~~l~v~dl~~g~~~l~~~~~----~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~ 257 (751)
T 2xe4_A 201 YTIEFKRISDPSQTIADKVS----GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKL 257 (751)
T ss_dssp EEEEEEETTCTTCCCCCCEE----EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSC
T ss_pred EEEEEEECCCCCEeCCcccc----CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCC
Confidence 36999999987 53111111 1234689999999988877652 1 23443665443
No 253
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.50 E-value=0.032 Score=41.24 Aligned_cols=25 Identities=0% Similarity=-0.296 Sum_probs=18.1
Q ss_pred EEecCCCeE-EEeCCCCcEEEeecCC
Q 032092 116 LFVQIHHTF-ATAGSDGAFNFWDKDS 140 (147)
Q Consensus 116 ~fspdg~~l-atg~~Dg~i~iWd~~~ 140 (147)
+|+|+|+.| ++-..++.|..+++..
T Consensus 191 a~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 191 EVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred EECCCCCEEEEEeCCCCeEEEEECCC
Confidence 899998744 4445567888888764
No 254
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.41 E-value=0.038 Score=40.25 Aligned_cols=134 Identities=11% Similarity=0.034 Sum_probs=69.0
Q ss_pred eEeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEEe
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCS 81 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~ 81 (147)
.+|+.++.|..||.. ++. ......+ ...+.++.+.+++..++ |+ +.+.. +| .+++....+...........
T Consensus 151 ~vgt~~~~l~~~d~~-g~~-~~~~~~~-~~~~~~~~~d~~g~l~v-~t--~~l~~--~d-~~g~~~~~~~~~~~~~~~~~ 221 (330)
T 3hxj_A 151 YVGSNDNYLYAINPD-GTE-KWRFKTN-DAITSAASIGKDGTIYF-GS--DKVYA--IN-PDGTEKWNFYAGYWTVTRPA 221 (330)
T ss_dssp EEECTTSEEEEECTT-SCE-EEEEECS-SCCCSCCEECTTCCEEE-ES--SSEEE--EC-TTSCEEEEECCSSCCCSCCE
T ss_pred EEEcCCCEEEEECCC-CCE-eEEEecC-CCceeeeEEcCCCEEEE-Ee--CEEEE--EC-CCCcEEEEEccCCcceeceE
Confidence 567778999999998 643 2223221 23466778877787554 44 66777 77 55666555542221111111
Q ss_pred eccc-eeeeecCCCcceeeeeeeeeeeeeec----eEEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 82 VISF-TSILAGDAPKYSSFYKVKRLHLFVKS----HVIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 82 v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
+... .+.++..+..+..+..-.+..+.... ...+...++|+ |..|+.+|.+..+| .+++.+..
T Consensus 222 ~~~~g~l~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d-~~g~~~~~ 289 (330)
T 3hxj_A 222 ISEDGTIYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAIN-PDGTEKWN 289 (330)
T ss_dssp ECTTSCEEEEETTTEEEEECTTSCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEEC-TTSCEEEE
T ss_pred ECCCCeEEEEcCCCeEEEECCCCCEeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEEC-CCCcEEEE
Confidence 1111 12222222332222211111111111 12356655665 56677899999998 87777654
No 255
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.39 E-value=0.041 Score=45.06 Aligned_cols=83 Identities=8% Similarity=0.034 Sum_probs=52.6
Q ss_pred EEEEccCCCEEEEEeeCC----------------eEEEEeecCCCCcceeEEEeccCCceEEee-ccceeeeecCCCcce
Q 032092 35 CVAAFPDQQGFWVGSIEG----------------RVGVHHLDDSQQSKNFTFKCHRDGSETCSV-ISFTSILAGDAPKYS 97 (147)
Q Consensus 35 ~la~spdg~~l~~g~~dg----------------~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v-~~~~~~~~~~~~~~~ 97 (147)
.+++.|+...+..++.++ .|.. +|..+|+....++........+.. .+. +
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~A--ld~~TG~~~W~~q~~~~d~wd~d~~~~p--~--------- 311 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFG--RDADTGEAKFGYQKTPHDEWDYAGVNVM--M--------- 311 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEE--EETTTCCEEEEEESSTTCSSCCCCCCCC--E---------
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEE--EeCCCCceeeEeecCCCccccccCCCcc--E---------
Confidence 456777777887777653 6666 898899888877642211000000 010 0
Q ss_pred eeeeeeeeeeeeeceEEEEEe-cCC---CeEEEeCCCCcEEEeecCCceeeec
Q 032092 98 SFYKVKRLHLFVKSHVIVLFV-QIH---HTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~fs-pdg---~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
-+... .+| +.++.++.+|.+++.|.++++.+..
T Consensus 312 ----------------l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~ 348 (599)
T 1w6s_A 312 ----------------LSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSA 348 (599)
T ss_dssp ----------------EEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ----------------EEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeec
Confidence 00222 567 5688888999999999999998764
No 256
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.27 E-value=0.035 Score=45.50 Aligned_cols=99 Identities=9% Similarity=-0.040 Sum_probs=55.8
Q ss_pred eEEEEECCCCcc-ceeEecCCCCcceEEEEEccCCCEEEEEee-CCeEEEEeecCCCCcceeEEEeccCCceEEeeccce
Q 032092 9 NLVVFNLQNPQT-EFKRINSPLKYQMRCVAAFPDQQGFWVGSI-EGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVISFT 86 (147)
Q Consensus 9 ~v~iwdi~~~~~-~~~~~~~~~~~~i~~la~spdg~~l~~g~~-dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~~~ 86 (147)
.+.+||..+.+- .......+......++++.++++.+++|+. ++.+.+ ||+.+++ .+....-.... ..
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~--yd~~t~~--W~~~~~~~~~R---~~--- 289 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL--YDSSSDS--WIPGPDMQVAR---GY--- 289 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE--EEGGGTE--EEECCCCSSCC---SS---
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE--ecCcCCc--eeECCCCCccc---cc---
Confidence 578899887642 111121111112335788899999999984 456777 7765432 11100000000 00
Q ss_pred eeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeC-CC-----CcEEEeecCCcee
Q 032092 87 SILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAG-SD-----GAFNFWDKDSKQR 143 (147)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~-~D-----g~i~iWd~~~~~~ 143 (147)
.+++..|+|++++.|| .+ ..+.+||.++.+.
T Consensus 290 --------------------------~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 290 --------------------------QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 326 (656)
T ss_dssp --------------------------CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred --------------------------cceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence 0126668999999988 44 5789999887653
No 257
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.10 E-value=0.078 Score=42.99 Aligned_cols=83 Identities=10% Similarity=0.029 Sum_probs=50.6
Q ss_pred EEEEccCCCEEEEEeeC----------------CeEEEEeecCCCCcceeEEEeccCCceEEe-eccceeeeecCCCcce
Q 032092 35 CVAAFPDQQGFWVGSIE----------------GRVGVHHLDDSQQSKNFTFKCHRDGSETCS-VISFTSILAGDAPKYS 97 (147)
Q Consensus 35 ~la~spdg~~l~~g~~d----------------g~i~i~~~d~~~~~~~~~~~~h~~~~~~~~-v~~~~~~~~~~~~~~~ 97 (147)
.+++.|+...+..++.+ +.|.. +|.++|+.+..++........+. +.+. .
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~A--ld~~tG~~~W~~~~~~~d~~d~~~~~~p-~---------- 305 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWG--RDLDTGMAKWGYQKTPHDEWDFAGVNQM-V---------- 305 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEE--EETTTCCEEEEEESSTTCSSCCCCCCCC-E----------
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEE--EecCCCcEEEEecCCCCcccccccCCCC-E----------
Confidence 36677776676666542 24666 89888988877763211100000 0111 0
Q ss_pred eeeeeeeeeeeeeceEEEEEecCCC---eEEEeCCCCcEEEeecCCceeeec
Q 032092 98 SFYKVKRLHLFVKSHVIVLFVQIHH---TFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~fspdg~---~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
-+...++|+ .++.++.+|.+++.|.++++.+..
T Consensus 306 ----------------l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~ 341 (571)
T 2ad6_A 306 ----------------LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVA 341 (571)
T ss_dssp ----------------EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ----------------EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEee
Confidence 013335774 678888899999999999988754
No 258
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.06 E-value=0.13 Score=41.83 Aligned_cols=28 Identities=18% Similarity=0.188 Sum_probs=23.8
Q ss_pred cCCC---eEEEeCCCCcEEEeecCCceeeec
Q 032092 119 QIHH---TFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 119 pdg~---~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.+|+ .++.++.||.++++|.++++.+..
T Consensus 331 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~ 361 (582)
T 1flg_A 331 KDGKIVKATAHADRNGFFYVVDRSNGKLQNA 361 (582)
T ss_dssp SSSCEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCCCEEEEEEEECCCceEEEEECCCCCEecc
Confidence 4674 788899999999999999998764
No 259
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.92 E-value=0.2 Score=36.87 Aligned_cols=58 Identities=7% Similarity=0.005 Sum_probs=34.2
Q ss_pred eEeecCCeEEEEECCCCccceeEecCCC-------------------CcceEEEEEcc-CCCEEEEEeeCCeEEEEeecC
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINSPL-------------------KYQMRCVAAFP-DQQGFWVGSIEGRVGVHHLDD 61 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~~~-------------------~~~i~~la~sp-dg~~l~~g~~dg~i~i~~~d~ 61 (147)
.++..++.|..||..+++. ..+..+. ...+..|++.| +|+ |.+++..+.+.. +|.
T Consensus 34 ~v~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d~~~~i~~--~d~ 108 (322)
T 2fp8_A 34 YTSVQDGRVIKYEGPNSGF--VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVDCYYHLSV--VGS 108 (322)
T ss_dssp EEECTTSEEEEECCTTTCE--EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEETTTEEEE--ECT
T ss_pred EEEcCCCeEEEECCCCCce--EEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEECCCCEEE--EeC
Confidence 4566788999999876532 2221000 01367899998 554 555555555766 776
Q ss_pred CCC
Q 032092 62 SQQ 64 (147)
Q Consensus 62 ~~~ 64 (147)
.++
T Consensus 109 ~~g 111 (322)
T 2fp8_A 109 EGG 111 (322)
T ss_dssp TCE
T ss_pred CCC
Confidence 543
No 260
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.86 E-value=0.05 Score=45.45 Aligned_cols=31 Identities=13% Similarity=0.053 Sum_probs=23.1
Q ss_pred ceEEEEEc-cCCCEEEEEee-CC----eEEEEeecCCCC
Q 032092 32 QMRCVAAF-PDQQGFWVGSI-EG----RVGVHHLDDSQQ 64 (147)
Q Consensus 32 ~i~~la~s-pdg~~l~~g~~-dg----~i~i~~~d~~~~ 64 (147)
.+...+|| |||+++|.+.. +| +|++ +|+.++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v--~dl~~g 211 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEF--KRISDP 211 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEE--EETTCT
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEE--EECCCC
Confidence 57789999 99999986554 23 3766 777766
No 261
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.64 E-value=0.27 Score=35.97 Aligned_cols=57 Identities=12% Similarity=-0.018 Sum_probs=31.4
Q ss_pred cCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcc
Q 032092 6 ADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSK 66 (147)
Q Consensus 6 ~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~ 66 (147)
.++.|..||..... ......+ .....|++.|+|+.+++....+..+|+.+|..+++.
T Consensus 51 ~~~~I~~~d~~g~~--~~~~~~~--~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 51 EVGEIVSITPDGNQ--QIHATVE--GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp TTTEEEEECTTCCE--EEEEECS--SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCCeEEEECCCCce--EEEEeCC--CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 45666667665431 1122211 347889999999976655433332233367665554
No 262
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.07 E-value=0.19 Score=36.89 Aligned_cols=29 Identities=17% Similarity=0.197 Sum_probs=23.5
Q ss_pred ceEEEEEccCCCEEEEEeeCCeEEEEeecCC
Q 032092 32 QMRCVAAFPDQQGFWVGSIEGRVGVHHLDDS 62 (147)
Q Consensus 32 ~i~~la~spdg~~l~~g~~dg~i~i~~~d~~ 62 (147)
....++++|+|+.+++-..+++|.. +|..
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~--~d~~ 61 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVS--ITPD 61 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEE--ECTT
T ss_pred CcceEEECCCCCEEEEeCCCCeEEE--ECCC
Confidence 4678999999997777767899887 7765
No 263
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.06 E-value=0.59 Score=33.19 Aligned_cols=50 Identities=10% Similarity=0.114 Sum_probs=29.9
Q ss_pred CeEEEEECCCCccceeEec-CCCCcceEEEEEccCCCEE-EEEeeCCeEEEEeecCC
Q 032092 8 RNLVVFNLQNPQTEFKRIN-SPLKYQMRCVAAFPDQQGF-WVGSIEGRVGVHHLDDS 62 (147)
Q Consensus 8 g~v~iwdi~~~~~~~~~~~-~~~~~~i~~la~spdg~~l-~~g~~dg~i~i~~~d~~ 62 (147)
+.|..+++..... ..+. ... .....|+++|+++.| ++-...++|.. +|..
T Consensus 146 ~~I~~~~~dg~~~--~~~~~~~~-~~P~gia~d~~~~~lyv~d~~~~~I~~--~~~~ 197 (267)
T 1npe_A 146 PKIETSHMDGTNR--RILAQDNL-GLPNGLTFDAFSSQLCWVDAGTHRAEC--LNPA 197 (267)
T ss_dssp CEEEEEETTSCCC--EEEECTTC-SCEEEEEEETTTTEEEEEETTTTEEEE--EETT
T ss_pred cEEEEEecCCCCc--EEEEECCC-CCCcEEEEcCCCCEEEEEECCCCEEEE--EecC
Confidence 5677777654321 2221 122 246889999987655 55556688888 6664
No 264
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.06 E-value=0.69 Score=35.96 Aligned_cols=40 Identities=8% Similarity=0.125 Sum_probs=25.7
Q ss_pred CeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEee
Q 032092 8 RNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSI 50 (147)
Q Consensus 8 g~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~ 50 (147)
+.|+.+|+..++. ..+.... .....|+++|+|+.|.+...
T Consensus 159 ~~I~~id~~~~~v--~~~~~~~-~~P~~ia~d~~G~~lyvad~ 198 (430)
T 3tc9_A 159 HPTRLIDFEKEYV--STVYSGL-SKVRTICWTHEADSMIITND 198 (430)
T ss_dssp EEEEEEETTTTEE--EEEECCC-SCEEEEEECTTSSEEEEEEC
T ss_pred CcEEEEECCCCEE--EEEecCC-CCcceEEEeCCCCEEEEEeC
Confidence 6788888887532 2332222 34689999999995555443
No 265
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.84 E-value=0.034 Score=42.48 Aligned_cols=116 Identities=7% Similarity=0.029 Sum_probs=60.8
Q ss_pred CeEeecCCeEEEEECCCCccceeEecCCCCcceEEEEE--cc-CCCEEEEE-eeCCeEEEEeecCCCCcceeEEEeccCC
Q 032092 1 MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAA--FP-DQQGFWVG-SIEGRVGVHHLDDSQQSKNFTFKCHRDG 76 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~--sp-dg~~l~~g-~~dg~i~i~~~d~~~~~~~~~~~~h~~~ 76 (147)
+++++.||.|.-.|..+|+..-+ +......++....- .+ ++..++.. +.||.+.. +|..+|.....+.....
T Consensus 13 V~v~t~dG~l~Ald~~tG~~~W~-~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a--~~~~~G~~~~~~~~~~l- 88 (339)
T 2be1_A 13 LIAADVEGGLHAVDRRNGHIIWS-IEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYY--FNAHQGLQKLPLSIRQL- 88 (339)
T ss_dssp EEEEETTSCEEEEETTTTEEEEE-ECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEE--EETTTEEEEEEEEHHHH-
T ss_pred EEEEeCCCeEEEEECCCCcEEEE-ecCCccCCcEEecCCccccCCcEEEEEECCCCEEEE--EECCCCcEEeeeccccc-
Confidence 46789999999999999975322 22110012111110 11 23344443 68999987 88777654444332110
Q ss_pred ceEEeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEE-ec----CCCeEEEeCCCCcEEEeecCCceeeecC
Q 032092 77 SETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLF-VQ----IHHTFATAGSDGAFNFWDKDSKQRLKVF 147 (147)
Q Consensus 77 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f-sp----dg~~latg~~Dg~i~iWd~~~~~~~~~~ 147 (147)
+..-. +...+.+ .. -+ .+..+.+|+.+|.+.--|+++|+.+.+|
T Consensus 89 -----v~~SP-~~~~~~p---------------------vv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 89 -----VSTSP-LHLKTNI---------------------VVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp -----HTTCS-EEEECC-------------------------------CCEEEEECEEEEEEEEEETTTCCEEEEE
T ss_pred -----eeccc-cccCCCc---------------------eeecccccccCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 00000 0000000 11 00 3356778888888888888888887764
No 266
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=94.77 E-value=0.72 Score=32.73 Aligned_cols=32 Identities=3% Similarity=-0.016 Sum_probs=23.8
Q ss_pred EEEecCCCeEEEeC-CCCcEEEeecCCceeeec
Q 032092 115 VLFVQIHHTFATAG-SDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 115 ~~fspdg~~latg~-~Dg~i~iWd~~~~~~~~~ 146 (147)
....+++..|..+. .++.|..+|.++++.+.+
T Consensus 212 ~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~ 244 (267)
T 1npe_A 212 FAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDT 244 (267)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eEEEEeCCEEEEEECCCCeEEEEeCCCCCceEE
Confidence 47778886555444 568999999998988765
No 267
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=94.70 E-value=0.71 Score=35.97 Aligned_cols=38 Identities=11% Similarity=-0.068 Sum_probs=24.0
Q ss_pred CeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEE
Q 032092 8 RNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVG 48 (147)
Q Consensus 8 g~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g 48 (147)
+.|+.+|..+++. ..+.... .....|+++|+|+.+++.
T Consensus 162 ~~I~~id~~~g~v--~~~~~~~-~~P~giavd~dG~lyVad 199 (433)
T 4hw6_A 162 DAFRHVDFVNQYV--DIKTTNI-GQCADVNFTLNGDMVVVD 199 (433)
T ss_dssp SCEEEEETTTTEE--EEECCCC-SCEEEEEECTTCCEEEEE
T ss_pred CCEEEEECCCCEE--EEeecCC-CCccEEEECCCCCEEEEc
Confidence 6677778766542 2332222 247899999999955544
No 268
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.54 E-value=0.77 Score=36.34 Aligned_cols=113 Identities=12% Similarity=0.010 Sum_probs=62.7
Q ss_pred ecCCeEEEEECCCCccceeEecCCC--Cc-ceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcce-eEEE-eccCCceE
Q 032092 5 TADRNLVVFNLQNPQTEFKRINSPL--KY-QMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKN-FTFK-CHRDGSET 79 (147)
Q Consensus 5 s~dg~v~iwdi~~~~~~~~~~~~~~--~~-~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~-~~~~-~h~~~~~~ 79 (147)
..++.||.-++.... ..+.+.-+. .+ .+..+..||+|++||.-+. ..|.| ..+-.+... .... ........
T Consensus 38 a~~n~iR~~~i~~~~-~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~V--v~LP~~~~~~~~~~~~~~~q~~t 113 (452)
T 3pbp_A 38 IQDNIIRWYNVLTDS-LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFV--MEVPWGYSNVEDVSIQDAFQIFH 113 (452)
T ss_dssp EETTEEEEEETTTCS-SCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEE--EECCTTCSCCCCHHHHHTTEEEE
T ss_pred EECCEEEEEECCCCC-cceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEE--EEecCccccCcccccccccceeE
Confidence 456888888888543 244443331 33 6888999999999998764 67888 554321100 0000 00000001
Q ss_pred EeeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCC---CeEEEeCCCCcEEEeecCC
Q 032092 80 CSVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIH---HTFATAGSDGAFNFWDKDS 140 (147)
Q Consensus 80 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg---~~latg~~Dg~i~iWd~~~ 140 (147)
+.+.... +.. =.....+.|||-+ ..|++=..|+.|++||+..
T Consensus 114 y~l~~~~---~~~----------------~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 114 YSIDEEE---VGP----------------KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp EEGGGCC-----C----------------CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred EEcCCcc---cCC----------------CCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 1111110 000 0112345999965 5788888999999999875
No 269
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.52 E-value=0.54 Score=35.98 Aligned_cols=28 Identities=7% Similarity=-0.097 Sum_probs=20.6
Q ss_pred EEEEEecCCCeEEEe-CCCCcEEEeecCC
Q 032092 113 VIVLFVQIHHTFATA-GSDGAFNFWDKDS 140 (147)
Q Consensus 113 ~~~~fspdg~~latg-~~Dg~i~iWd~~~ 140 (147)
+.++|+||++.|..+ +..+.|..|+++.
T Consensus 224 NGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 224 NGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 345999999766554 4578899999863
No 270
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=93.58 E-value=1.2 Score=34.62 Aligned_cols=59 Identities=3% Similarity=-0.089 Sum_probs=33.8
Q ss_pred cCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCE-EEEEeeCCeEEEEeecCCCC
Q 032092 6 ADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQG-FWVGSIEGRVGVHHLDDSQQ 64 (147)
Q Consensus 6 ~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~-l~~g~~dg~i~i~~~d~~~~ 64 (147)
.++.|+.+|..++..............-..|+|+|+|+. +++-...++|..+++|..++
T Consensus 248 ~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~ 307 (433)
T 4hw6_A 248 HHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETG 307 (433)
T ss_dssp TCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTC
T ss_pred CCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCc
Confidence 356777888776542111111111112346999999984 55555678898855554333
No 271
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=93.50 E-value=0.45 Score=38.85 Aligned_cols=29 Identities=17% Similarity=0.055 Sum_probs=19.6
Q ss_pred EEEEcc-CCCEEEEEeeCC-----------eEEEEeecCCCCc
Q 032092 35 CVAAFP-DQQGFWVGSIEG-----------RVGVHHLDDSQQS 65 (147)
Q Consensus 35 ~la~sp-dg~~l~~g~~dg-----------~i~i~~~d~~~~~ 65 (147)
..++.| +++.++.|+.++ .+.+ ||+.+++
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~--yd~~t~~ 230 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSS--WDPSTGI 230 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEE--ECTTTCC
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEE--EeCCCCc
Confidence 567778 888888887643 3445 7776543
No 272
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=93.39 E-value=2 Score=32.92 Aligned_cols=56 Identities=11% Similarity=0.188 Sum_probs=36.9
Q ss_pred EeecCCeEEEEECC---CCc---cceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCC
Q 032092 3 VGTADRNLVVFNLQ---NPQ---TEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDS 62 (147)
Q Consensus 3 ~gs~dg~v~iwdi~---~~~---~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~ 62 (147)
+...+|.+..|++. +++ +++.++.- ..++..++..|....|.++-.+.- ||-+|..
T Consensus 148 V~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l--gsq~EgcvvDd~~g~Lyv~eEd~G--Iw~~da~ 209 (355)
T 3amr_A 148 VTGKEGEFEQYELKADKNGYISGKKVRAFKM--NSQTEGMAADDEYGRLYIAEEDEA--IWKFSAE 209 (355)
T ss_dssp EECSSSEEEEEEEEECTTSCEEEEEEEEEEC--SSCEEEEEEETTTTEEEEEETTTE--EEEEECS
T ss_pred EECCCCeEEEEEEEeCCCCcccceEEEEecC--CCCcceEEEcCCCCeEEEecccce--EEEEeCC
Confidence 44567889999883 221 12333432 245788888998889999888855 5667743
No 273
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=93.23 E-value=2.1 Score=35.50 Aligned_cols=59 Identities=17% Similarity=0.305 Sum_probs=39.8
Q ss_pred EeecCCeEEEEECCCCccceeEecCC--------CCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCc
Q 032092 3 VGTADRNLVVFNLQNPQTEFKRINSP--------LKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQS 65 (147)
Q Consensus 3 ~gs~dg~v~iwdi~~~~~~~~~~~~~--------~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~ 65 (147)
+|+.++-|..||.++++ +..+... ....|.+++..++|+.|.+|+.++-+.+ +|..+++
T Consensus 372 iGt~~~Gl~~~~~~~~~--~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~--~d~~~~~ 438 (795)
T 4a2l_A 372 IGTNDGGLNLYNPITQR--FTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSI--LHRNSGQ 438 (795)
T ss_dssp EEESSSCEEEECTTTCC--EEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEE--EETTTCC
T ss_pred EEECCCCeEEEcCCCCc--EEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeE--EeCCCCc
Confidence 56777789999988763 2232211 1235899998888885777787677777 7776543
No 274
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=92.35 E-value=1.2 Score=32.42 Aligned_cols=37 Identities=5% Similarity=-0.094 Sum_probs=27.4
Q ss_pred cceEEEEEccCCC-EEEEEeeCCeEEEEeecCCCCcceeEE
Q 032092 31 YQMRCVAAFPDQQ-GFWVGSIEGRVGVHHLDDSQQSKNFTF 70 (147)
Q Consensus 31 ~~i~~la~spdg~-~l~~g~~dg~i~i~~~d~~~~~~~~~~ 70 (147)
..+..|+++|+++ .+++...++.|.. +|+. ++.+.++
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~--ld~~-g~v~~~i 64 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVE--MTTN-GDLIRTI 64 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEE--EETT-CCEEEEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEE--EeCC-CCEEEEE
Confidence 3589999999865 5566777888877 8886 6666555
No 275
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=92.07 E-value=0.64 Score=36.15 Aligned_cols=71 Identities=13% Similarity=0.057 Sum_probs=43.4
Q ss_pred eEEEEEcc-CCCEEEEEeeCCeEEEEeecCCCCcceeEEEeccCCceEEeeccceeeeecCCCcceeeeeeeeeeeeeec
Q 032092 33 MRCVAAFP-DQQGFWVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVISFTSILAGDAPKYSSFYKVKRLHLFVKS 111 (147)
Q Consensus 33 i~~la~sp-dg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (147)
...++++| +|..+++-..+++|.. +|...+... .+...... ..++.+
T Consensus 228 p~giavdp~~g~lyv~d~~~~~V~~--~~~~~~~~~-~~~~~~~~---~~P~gi-------------------------- 275 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWNAGQVFR--YDFTTQETT-PLFTIQDS---GWEFHI-------------------------- 275 (430)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEE--EETTTTEEE-EEEECSSS---SCCEEE--------------------------
T ss_pred ceEEEEeCCCCEEEEEECCCCEEEE--EECCCCcEE-EEEEcCCC---CcceeE--------------------------
Confidence 46789999 6777777667788887 666533221 11111000 012233
Q ss_pred eEEEEEecCCC-eEEEeCCCCcEEEeecC
Q 032092 112 HVIVLFVQIHH-TFATAGSDGAFNFWDKD 139 (147)
Q Consensus 112 ~~~~~fspdg~-~latg~~Dg~i~iWd~~ 139 (147)
+|+|+|+ ++++-...+.|..++.+
T Consensus 276 ----a~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 276 ----QFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp ----EECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ----EEcCCCCEEEEEECCCCEEEEEeCC
Confidence 9999998 55665667889987754
No 276
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=91.65 E-value=0.27 Score=35.59 Aligned_cols=28 Identities=7% Similarity=0.090 Sum_probs=22.2
Q ss_pred ceEEEEEccCCCEEEEEeeCCeEEEEeecCCC
Q 032092 32 QMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQ 63 (147)
Q Consensus 32 ~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~ 63 (147)
.++.++|+|||..+++ .+|.+.- .++.+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~--~~~~t 69 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYK--GTPPT 69 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEE--ESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEE--ECCCC
Confidence 5789999999998888 7787654 77644
No 277
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=90.93 E-value=3.4 Score=29.95 Aligned_cols=57 Identities=11% Similarity=0.022 Sum_probs=35.6
Q ss_pred EeecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecC
Q 032092 3 VGTADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDD 61 (147)
Q Consensus 3 ~gs~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~ 61 (147)
+...++.|...|.. ++. ..++.-......-.|++.+++.++++.-.++.+.++.++.
T Consensus 44 V~d~~~~I~~ld~~-g~v-~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 44 TINKPAAIVEMTTN-GDL-IRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp EEETTEEEEEEETT-CCE-EEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred EECCCCeEEEEeCC-CCE-EEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 44567788888887 542 3333211112467889988887666655677888844443
No 278
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=90.72 E-value=3.8 Score=30.82 Aligned_cols=47 Identities=11% Similarity=0.137 Sum_probs=24.7
Q ss_pred eEeecCCeEEEEECCCCccceeEec--CCCCcceEEEEEccC---CCEEEEEe
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRIN--SPLKYQMRCVAAFPD---QQGFWVGS 49 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~--~~~~~~i~~la~spd---g~~l~~g~ 49 (147)
.++..+|.|+++| ..++.++..+. .........|+++|+ +..|.++.
T Consensus 43 ~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~ 94 (354)
T 3a9g_A 43 LVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYA 94 (354)
T ss_dssp EEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred EEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEE
Confidence 3445568888887 33432222111 111234789999997 44444433
No 279
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=90.70 E-value=2.1 Score=34.31 Aligned_cols=32 Identities=6% Similarity=-0.093 Sum_probs=23.8
Q ss_pred ceEEEEEccCCCE-EEEEeeCCeEEEEeecCCC
Q 032092 32 QMRCVAAFPDQQG-FWVGSIEGRVGVHHLDDSQ 63 (147)
Q Consensus 32 ~i~~la~spdg~~-l~~g~~dg~i~i~~~d~~~ 63 (147)
..+.|+|+|+|+. +++=+..++|+.+++|...
T Consensus 311 ~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~ 343 (496)
T 3kya_A 311 WEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIK 343 (496)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEEETTT
T ss_pred CceEEEEcCCCCEEEEEeCCCCEEEEEecCCCc
Confidence 3578999999995 5555667889886666544
No 280
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=89.85 E-value=6.5 Score=31.43 Aligned_cols=24 Identities=13% Similarity=-0.004 Sum_probs=19.9
Q ss_pred EEecC-CCeEEEeCCCCcEEEeecC
Q 032092 116 LFVQI-HHTFATAGSDGAFNFWDKD 139 (147)
Q Consensus 116 ~fspd-g~~latg~~Dg~i~iWd~~ 139 (147)
+.+|+ +.++++-..++.|..+|.+
T Consensus 253 avdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 253 TIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp EECTTTCCEEEEETTTTEEEEECHH
T ss_pred EEcCCCCeEEEEECCCCEEEEEecc
Confidence 89995 5667777788899999987
No 281
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=89.80 E-value=1.4 Score=37.92 Aligned_cols=34 Identities=12% Similarity=0.228 Sum_probs=29.7
Q ss_pred EEEEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 113 VIVLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 113 ~~~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
+.++..++..++.|=+.|+++|+|++.+++++.+
T Consensus 239 ~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 239 ISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp EEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred EEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 3457778888999999999999999999999875
No 282
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=89.25 E-value=4.1 Score=33.69 Aligned_cols=57 Identities=21% Similarity=0.279 Sum_probs=34.6
Q ss_pred EeecCCeEEEEECCCCccceeEecC--CCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCc
Q 032092 3 VGTADRNLVVFNLQNPQTEFKRINS--PLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQS 65 (147)
Q Consensus 3 ~gs~dg~v~iwdi~~~~~~~~~~~~--~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~ 65 (147)
+|+.++-+..||.++++ ++.+.. .....|.++...++|+. .+|+.. -+.+ +|..+++
T Consensus 422 igt~~~Gl~~~~~~~~~--~~~~~~~~~~~~~v~~i~~d~~g~l-wigt~~-Gl~~--~~~~~~~ 480 (781)
T 3v9f_A 422 FGTYLGNISYYNTRLKK--FQIIELEKNELLDVRVFYEDKNKKI-WIGTHA-GVFV--IDLASKK 480 (781)
T ss_dssp EEETTEEEEEECSSSCE--EEECCSTTTCCCCEEEEEECTTSEE-EEEETT-EEEE--EESSSSS
T ss_pred EEeccCCEEEEcCCCCc--EEEeccCCCCCCeEEEEEECCCCCE-EEEECC-ceEE--EeCCCCe
Confidence 45666778889987763 233321 12245899988887764 445554 4656 6776543
No 283
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=88.90 E-value=6.6 Score=32.55 Aligned_cols=57 Identities=11% Similarity=0.163 Sum_probs=35.9
Q ss_pred eEeecCCeEEEEECCCCccceeEecC----CCCcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCC
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRINS----PLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQ 64 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~~----~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~ 64 (147)
-+|+.++-|.+||.++++ +..+.. .....|.++...++|+..+. +.+| +.+ +|..++
T Consensus 421 Wigt~~~Gl~~~d~~~~~--~~~~~~~~~~l~~~~v~~i~~d~~g~lwig-t~~G-l~~--~~~~~~ 481 (795)
T 4a2l_A 421 YIGTHAGGLSILHRNSGQ--VENFNQRNSQLVNENVYAILPDGEGNLWLG-TLSA-LVR--FNPEQR 481 (795)
T ss_dssp EEEETTTEEEEEETTTCC--EEEECTTTSCCSCSCEEEEEECSSSCEEEE-ESSC-EEE--EETTTT
T ss_pred EEEeCcCceeEEeCCCCc--EEEeecCCCCcCCCeeEEEEECCCCCEEEE-ecCc-eeE--EeCCCC
Confidence 456777789999998864 233321 11235899998888875544 4455 555 677544
No 284
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=88.48 E-value=5.8 Score=29.05 Aligned_cols=52 Identities=6% Similarity=-0.079 Sum_probs=27.7
Q ss_pred cCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEee-C-CeEEEEeecC
Q 032092 6 ADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSI-E-GRVGVHHLDD 61 (147)
Q Consensus 6 ~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~-d-g~i~i~~~d~ 61 (147)
..+.|.++|+..... ...+.... ...+.|++.|++..+..... . +.|.. ++.
T Consensus 97 ~~~~I~~~~~~g~~~-~~~~~~~~-~~P~~iavdp~~g~ly~~d~~~~~~I~~--~~~ 150 (316)
T 1ijq_A 97 VLGTVSVADTKGVKR-KTLFRENG-SKPRAIVVDPVHGFMYWTDWGTPAKIKK--GGL 150 (316)
T ss_dssp TTTEEEEEETTSSSE-EEEEECTT-CCEEEEEEETTTTEEEEEECSSSCEEEE--EET
T ss_pred CCCEEEEEeCCCCce-EEEEECCC-CCcceEEeCCCCCEEEEEccCCCCeEEE--EcC
Confidence 345666677654321 11122122 24689999996655444443 3 67776 554
No 285
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=88.28 E-value=6.5 Score=29.35 Aligned_cols=49 Identities=18% Similarity=0.257 Sum_probs=26.9
Q ss_pred cCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCE-EEEEeeC-CeEEE
Q 032092 6 ADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQG-FWVGSIE-GRVGV 56 (147)
Q Consensus 6 ~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~-l~~g~~d-g~i~i 56 (147)
..+.|.+.++..... ........ ...+.|++.|++.. +.+-... +.|..
T Consensus 136 ~~~~I~~~~~dG~~~-~~l~~~~l-~~P~~iavdp~~g~ly~td~~~~~~I~r 186 (349)
T 3v64_C 136 GTSRIEVANLDGAHR-KVLLWQSL-EKPRAIALHPMEGTIYWTDWGNTPRIEA 186 (349)
T ss_dssp TTTEEEEEETTSCSC-EEEECTTC-SCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred CCCeEEEEcCCCCce-EEEEeCCC-CCcceEEEecCcCeEEEeccCCCCEEEE
Confidence 345677777664322 11122122 24689999996554 4444444 67776
No 286
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=87.85 E-value=7 Score=29.24 Aligned_cols=47 Identities=6% Similarity=0.144 Sum_probs=24.8
Q ss_pred eEeecCCeEEEEECCCCcc-ceeEec--CCCCcceEEEEEccC---CCEEEEEee
Q 032092 2 VVGTADRNLVVFNLQNPQT-EFKRIN--SPLKYQMRCVAAFPD---QQGFWVGSI 50 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~-~~~~~~--~~~~~~i~~la~spd---g~~l~~g~~ 50 (147)
.++..+|.|++++ .++. ++..+. .........|+++|| +..|.++..
T Consensus 45 ~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~ 97 (352)
T 2ism_A 45 LIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRT 97 (352)
T ss_dssp EEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred EEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEe
Confidence 3445568888888 3321 111111 011234789999998 445444433
No 287
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=87.77 E-value=3.2 Score=34.40 Aligned_cols=52 Identities=8% Similarity=-0.042 Sum_probs=27.3
Q ss_pred cCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEe-eC-CeEEEEeecC
Q 032092 6 ADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGS-IE-GRVGVHHLDD 61 (147)
Q Consensus 6 ~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~-~d-g~i~i~~~d~ 61 (147)
..+.|.++|+..... ..+........+.|++.|++..|.... .. ++|.. +++
T Consensus 473 ~~~~I~v~d~dg~~~--~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~--~~~ 526 (699)
T 1n7d_A 473 VLGTVSVADTKGVKR--KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKK--GGL 526 (699)
T ss_dssp TTSCEEEEBSSSCCE--EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEB--CCS
T ss_pred cCCeEEEEecCCCce--EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEE--EeC
Confidence 346677777765421 222111112357889999755444333 22 67766 554
No 288
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=87.74 E-value=2.2 Score=33.82 Aligned_cols=31 Identities=10% Similarity=0.110 Sum_probs=25.8
Q ss_pred cceEEEEEccC---CCEEEEEeeCCeEEEEeecC
Q 032092 31 YQMRCVAAFPD---QQGFWVGSIEGRVGVHHLDD 61 (147)
Q Consensus 31 ~~i~~la~spd---g~~l~~g~~dg~i~i~~~d~ 61 (147)
.+|..+-|+|- +..|++=..|++|++|+++.
T Consensus 125 s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 125 SSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp CCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred CceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 46999999995 56899999999999955544
No 289
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=86.67 E-value=9.7 Score=33.64 Aligned_cols=52 Identities=17% Similarity=0.198 Sum_probs=30.8
Q ss_pred CeEEEEECCCCccceeEecCCCCcceEEEE---EccC-CCEEEEEe----------eCCeEEEEeec
Q 032092 8 RNLVVFNLQNPQTEFKRINSPLKYQMRCVA---AFPD-QQGFWVGS----------IEGRVGVHHLD 60 (147)
Q Consensus 8 g~v~iwdi~~~~~~~~~~~~~~~~~i~~la---~spd-g~~l~~g~----------~dg~i~i~~~d 60 (147)
+.|++.|-.+.+. ...++-.....+.|++ |..+ ..+|++|+ ..|.|.++.++
T Consensus 807 s~i~lidp~t~~~-i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~ 872 (1158)
T 3ei3_A 807 HNLLIIDQHTFEV-LHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYS 872 (1158)
T ss_dssp EEEEEEETTTCCE-EEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEE
T ss_pred EEEEEEeCCCCeE-EEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEE
Confidence 4689999888753 3444322233455555 3333 46899887 34677774443
No 290
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=86.03 E-value=10 Score=31.37 Aligned_cols=56 Identities=18% Similarity=0.192 Sum_probs=32.6
Q ss_pred EeecCCeEEEEECCCCccceeEecCCC-----CcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCC
Q 032092 3 VGTADRNLVVFNLQNPQTEFKRINSPL-----KYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQ 64 (147)
Q Consensus 3 ~gs~dg~v~iwdi~~~~~~~~~~~~~~-----~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~ 64 (147)
.|+. +-+..||..+++. ..+.... ...|.+|+..++|+..+.....| +.. +|..++
T Consensus 465 igt~-~Gl~~~~~~~~~~--~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~--~~~~~~ 525 (781)
T 3v9f_A 465 IGTH-AGVFVIDLASKKV--IHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGI--YTPDMQ 525 (781)
T ss_dssp EEET-TEEEEEESSSSSC--CEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEE--ECTTCC
T ss_pred EEEC-CceEEEeCCCCeE--EecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEE--EeCCCC
Confidence 3454 5688899887642 2221111 23589999988887554433355 545 677543
No 291
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=85.47 E-value=10 Score=28.71 Aligned_cols=28 Identities=14% Similarity=0.144 Sum_probs=17.9
Q ss_pred ceEEEEEccCCCEEEEEe-eC-CeEEEEeecC
Q 032092 32 QMRCVAAFPDQQGFWVGS-IE-GRVGVHHLDD 61 (147)
Q Consensus 32 ~i~~la~spdg~~l~~g~-~d-g~i~i~~~d~ 61 (147)
..+.|++.|++..|.... .. +.|.. ++.
T Consensus 203 ~P~giavdp~~g~ly~td~~~~~~I~r--~~~ 232 (386)
T 3v65_B 203 KPRAIALHPMEGTIYWTDWGNTPRIEA--SSM 232 (386)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEE--EET
T ss_pred CCcEEEEEcCCCeEEEeccCCCCEEEE--EeC
Confidence 468999999765544443 34 66766 554
No 292
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=84.94 E-value=1 Score=39.49 Aligned_cols=32 Identities=13% Similarity=0.229 Sum_probs=28.7
Q ss_pred EEEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 115 VLFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 115 ~~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
++..++.+++.|=+.|+++||||+.+++++.+
T Consensus 243 ~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 243 MIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 36778889999999999999999999999876
No 293
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=84.92 E-value=2.9 Score=31.39 Aligned_cols=26 Identities=19% Similarity=0.261 Sum_probs=20.2
Q ss_pred ceEEEEEccCCCEEEEEeeCCeEEEEeec
Q 032092 32 QMRCVAAFPDQQGFWVGSIEGRVGVHHLD 60 (147)
Q Consensus 32 ~i~~la~spdg~~l~~g~~dg~i~i~~~d 60 (147)
....|+|.|||+.+++ ..+|+|.+ ++
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~--i~ 57 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRL--FR 57 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEE--EE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEE--EE
Confidence 3579999999985554 66799988 65
No 294
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=84.63 E-value=10 Score=28.00 Aligned_cols=54 Identities=13% Similarity=0.115 Sum_probs=31.6
Q ss_pred cCCeEEEEECCCCccceeEecCCCCcceEEEEEccC-CCEEEEEeeCCeEEEEeecCC
Q 032092 6 ADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPD-QQGFWVGSIEGRVGVHHLDDS 62 (147)
Q Consensus 6 ~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spd-g~~l~~g~~dg~i~i~~~d~~ 62 (147)
....|+..|+.............. .....|+|.+. +..+.+-...+.|.. ++..
T Consensus 11 ~~~~I~~i~l~~~~~~~~~~~~~~-~~~~~ld~d~~~~~lyw~D~~~~~I~r--~~~~ 65 (318)
T 3sov_A 11 NRRDLRLVDATNGKENATIVVGGL-EDAAAVDFVFSHGLIYWSDVSEEAIKR--TEFN 65 (318)
T ss_dssp CEEEEEEEETTCTTSCCEEEEEEE-EEEEEEEEEGGGTEEEEEETTTTEEEE--EETT
T ss_pred ccCeEEEEECCCCceEEEEEecCC-CccEEEEEEeCCCEEEEEECCCCcEEE--EEcc
Confidence 356799999987631111111111 23568899986 445556556778877 5554
No 295
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=82.15 E-value=12 Score=27.51 Aligned_cols=23 Identities=13% Similarity=0.088 Sum_probs=17.1
Q ss_pred ceEEEEEccCCCEEEEEeeCCeEE
Q 032092 32 QMRCVAAFPDQQGFWVGSIEGRVG 55 (147)
Q Consensus 32 ~i~~la~spdg~~l~~g~~dg~i~ 55 (147)
.+.++++.|+++.+++|. +|.+.
T Consensus 251 ~~~~v~~~~~~~~~~~g~-~g~i~ 273 (327)
T 2xbg_A 251 GFLDLAYRTPNEVWLAGG-AGALL 273 (327)
T ss_dssp CEEEEEESSSSCEEEEES-TTCEE
T ss_pred ceEEEEecCCCEEEEEeC-CCeEE
Confidence 478899998887777655 67764
No 296
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=81.77 E-value=13 Score=27.31 Aligned_cols=52 Identities=15% Similarity=0.031 Sum_probs=28.3
Q ss_pred cCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEee--CCeEEEEeecC
Q 032092 6 ADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSI--EGRVGVHHLDD 61 (147)
Q Consensus 6 ~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~--dg~i~i~~~d~ 61 (147)
..+.|.++|+..... ........ ...+.|++.|.+..+..... .+.|.. ++.
T Consensus 99 ~~~~I~~~~~dG~~~-~~l~~~~~-~~P~giavdp~~g~ly~td~~~~~~I~r--~~~ 152 (318)
T 3sov_A 99 ETNRIEVSNLDGSLR-KVLFWQEL-DQPRAIALDPSSGFMYWTDWGEVPKIER--AGM 152 (318)
T ss_dssp TTTEEEEEETTSCSC-EEEECSSC-SSEEEEEEEGGGTEEEEEECSSSCEEEE--EET
T ss_pred CCCEEEEEECCCCcE-EEEEeCCC-CCccEEEEeCCCCEEEEEecCCCCEEEE--EEc
Confidence 345677777654321 11121222 24689999997555554442 467776 554
No 297
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=81.73 E-value=14 Score=27.48 Aligned_cols=28 Identities=18% Similarity=0.122 Sum_probs=18.8
Q ss_pred eEEEEEccCC-CEEEEEeeCCeEEEEeecCC
Q 032092 33 MRCVAAFPDQ-QGFWVGSIEGRVGVHHLDDS 62 (147)
Q Consensus 33 i~~la~spdg-~~l~~g~~dg~i~i~~~d~~ 62 (147)
...|++.|.+ +.+.+-...+.|.+ ++..
T Consensus 118 p~glavd~~~g~ly~~d~~~~~I~~--~~~d 146 (349)
T 3v64_C 118 PGGLAVDWVHDKLYWTDSGTSRIEV--ANLD 146 (349)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEE--EETT
T ss_pred ccEEEEecCCCeEEEEcCCCCeEEE--EcCC
Confidence 4678998864 45556566778887 5543
No 298
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=81.29 E-value=9.2 Score=31.65 Aligned_cols=28 Identities=14% Similarity=0.108 Sum_probs=19.4
Q ss_pred eEEEEEccCCC-EEEEEeeCCeEEEEeecCC
Q 032092 33 MRCVAAFPDQQ-GFWVGSIEGRVGVHHLDDS 62 (147)
Q Consensus 33 i~~la~spdg~-~l~~g~~dg~i~i~~~d~~ 62 (147)
.+.|+++|+++ .+++-+..++|.. +|..
T Consensus 542 PnGlavd~~~~~LY~aD~~~~~I~~--~d~d 570 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSKLHSISS--IDVN 570 (699)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEE--ECSS
T ss_pred ccEEEEeccCCEEEEEecCCCeEEE--EccC
Confidence 57899999855 4555556678887 5553
No 299
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=81.09 E-value=5.6 Score=32.58 Aligned_cols=16 Identities=0% Similarity=-0.176 Sum_probs=11.9
Q ss_pred EEEEEccCCCEEEEEe
Q 032092 34 RCVAAFPDQQGFWVGS 49 (147)
Q Consensus 34 ~~la~spdg~~l~~g~ 49 (147)
--|+|+|+|++++.-+
T Consensus 479 DNL~fd~~G~LwI~eD 494 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTD 494 (592)
T ss_dssp EEEEECTTCCEEEEEC
T ss_pred cceEECCCCCEEEEec
Confidence 4599999998666544
No 300
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=80.65 E-value=17 Score=27.77 Aligned_cols=53 Identities=9% Similarity=0.161 Sum_probs=31.1
Q ss_pred CCeEEEEECCCCccceeEecC---C--CC-cceEEEEE--ccC-CC-EEEEEeeCCeEEEEee
Q 032092 7 DRNLVVFNLQNPQTEFKRINS---P--LK-YQMRCVAA--FPD-QQ-GFWVGSIEGRVGVHHL 59 (147)
Q Consensus 7 dg~v~iwdi~~~~~~~~~~~~---~--~~-~~i~~la~--spd-g~-~l~~g~~dg~i~i~~~ 59 (147)
+++|++|++.....++..+.. + .. ..+.-+|+ +|. ++ ++.+...+|.+..|.+
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l 160 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYEL 160 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEE
Confidence 579999987422122333321 1 11 23556777 775 54 5667788899887444
No 301
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=80.22 E-value=2.4 Score=32.23 Aligned_cols=29 Identities=10% Similarity=0.180 Sum_probs=23.4
Q ss_pred CCEEEEEeeCCeEEEEeecCCCCcceeEEEe
Q 032092 42 QQGFWVGSIEGRVGVHHLDDSQQSKNFTFKC 72 (147)
Q Consensus 42 g~~l~~g~~dg~i~i~~~d~~~~~~~~~~~~ 72 (147)
+..+++++.||.|.- +|..+|+...+++.
T Consensus 10 ~~~V~v~t~dG~l~A--ld~~tG~~~W~~~~ 38 (339)
T 2be1_A 10 SDILIAADVEGGLHA--VDRRNGHIIWSIEP 38 (339)
T ss_dssp EEEEEEEETTSCEEE--EETTTTEEEEEECG
T ss_pred CCEEEEEeCCCeEEE--EECCCCcEEEEecC
Confidence 357888899999877 88888888888754
No 302
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=79.49 E-value=18 Score=27.46 Aligned_cols=51 Identities=6% Similarity=-0.084 Sum_probs=26.2
Q ss_pred CCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEee--CCeEEEEeecC
Q 032092 7 DRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSI--EGRVGVHHLDD 61 (147)
Q Consensus 7 dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~--dg~i~i~~~d~ 61 (147)
.+.|.+.|+..... ...+.... ...+.|++.|.+..|..... .+.|.. ++.
T Consensus 180 ~~~I~~~~~~g~~~-~~l~~~~~-~~P~~iavdp~~g~ly~td~~~~~~I~~--~~~ 232 (400)
T 3p5b_L 180 LGTVSVADTKGVKR-KTLFRENG-SKPRAIVVDPVHGFMYWTDWGTPAKIKK--GGL 232 (400)
T ss_dssp TTEEEEECTTTCSE-EEEEECSS-CCEEEEEEETTTTEEEEEECSSSCCEEE--EET
T ss_pred CCeEEEEeCCCCce-EEEEeCCC-CCcceEEEecccCeEEEEeCCCCCEEEE--EeC
Confidence 44555555554321 11122122 23688999997655544442 366766 554
No 303
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=79.27 E-value=15 Score=27.86 Aligned_cols=17 Identities=18% Similarity=-0.052 Sum_probs=13.0
Q ss_pred eEEEEEccCCCEEEEEe
Q 032092 33 MRCVAAFPDQQGFWVGS 49 (147)
Q Consensus 33 i~~la~spdg~~l~~g~ 49 (147)
...|+|.|||..+++-+
T Consensus 142 g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 142 GGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp CCCEEECTTSCEEEECB
T ss_pred CccccCCCCCCEEEEEC
Confidence 46799999998776644
No 304
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=78.89 E-value=14 Score=27.60 Aligned_cols=16 Identities=13% Similarity=-0.072 Sum_probs=12.4
Q ss_pred eEEEEEccCCCEEEEE
Q 032092 33 MRCVAAFPDQQGFWVG 48 (147)
Q Consensus 33 i~~la~spdg~~l~~g 48 (147)
...|+|.|||..+++-
T Consensus 137 ~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 137 GGRIRFGPDGMLYITT 152 (354)
T ss_dssp CCCEEECTTSCEEEEC
T ss_pred CceEEECCCCcEEEEE
Confidence 4679999999876663
No 305
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=78.66 E-value=2.3 Score=35.72 Aligned_cols=29 Identities=10% Similarity=0.155 Sum_probs=25.7
Q ss_pred ecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 118 VQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 118 spdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
.++.++++|=+.|.++|+||+++++++.+
T Consensus 228 ~~~~~fLftL~~Dh~LRiWsL~t~~lv~t 256 (729)
T 3f7f_A 228 LFHERYLIVLTQNCHLKIWDLTSFTLIQD 256 (729)
T ss_dssp EETTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred ccCCcEEEEEEcCCeEEEEEcCCCceEEe
Confidence 55678999999999999999999998865
No 306
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=78.25 E-value=16 Score=26.07 Aligned_cols=24 Identities=13% Similarity=0.210 Sum_probs=18.1
Q ss_pred CCCeEEEeCCC-----CcEEEeecCCcee
Q 032092 120 IHHTFATAGSD-----GAFNFWDKDSKQR 143 (147)
Q Consensus 120 dg~~latg~~D-----g~i~iWd~~~~~~ 143 (147)
++++++.||.+ ..+.+||.++.+.
T Consensus 247 ~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 247 GSIVYVLAGFQGVGRLGHILEYNTETDKW 275 (306)
T ss_dssp TTEEEEEECBCSSSBCCEEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCeeeeeEEEEcCCCCeE
Confidence 67888888854 4688999887653
No 307
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=78.11 E-value=30 Score=29.19 Aligned_cols=36 Identities=25% Similarity=0.231 Sum_probs=23.2
Q ss_pred ceEEEEEccCCC-EEEEEeeCCeEEEEeecCCCCcceeEE
Q 032092 32 QMRCVAAFPDQQ-GFWVGSIEGRVGVHHLDDSQQSKNFTF 70 (147)
Q Consensus 32 ~i~~la~spdg~-~l~~g~~dg~i~i~~~d~~~~~~~~~~ 70 (147)
....||+.+.++ .+++-...++|.+ +++. ++...++
T Consensus 472 ~P~GLAvD~~~~~LY~tD~~~~~I~v--~~ld-G~~~~~l 508 (791)
T 3m0c_C 472 APDGLAVDWIHSNIYWTDSVLGTVSV--ADTK-GVKRKTL 508 (791)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEE--EETT-SSSEEEE
T ss_pred CcceeeeeecCCcEEEEecCCCeEEE--EeCC-CCeEEEE
Confidence 357899998775 5556566788888 6654 3333333
No 308
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=78.07 E-value=17 Score=26.42 Aligned_cols=53 Identities=9% Similarity=0.100 Sum_probs=33.3
Q ss_pred ecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCE-EEEEeeCCeEEEEeecCC
Q 032092 5 TADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQG-FWVGSIEGRVGVHHLDDS 62 (147)
Q Consensus 5 s~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~-l~~g~~dg~i~i~~~d~~ 62 (147)
+....|+..|+...+. ...+. .. ..+..++|+|+++. +.+-..++.|.. +++.
T Consensus 7 ~~~~~I~~i~~~~~~~-~~~~~-~~-~~p~g~~~d~~~~~ly~~D~~~~~I~~--~~~~ 60 (316)
T 1ijq_A 7 TNRHEVRKMTLDRSEY-TSLIP-NL-RNVVALDTEVASNRIYWSDLSQRMICS--TQLD 60 (316)
T ss_dssp ECBSSEEEEETTSCCC-EEEEC-SC-SSEEEEEEETTTTEEEEEETTTTEEEE--EEC-
T ss_pred ECCCeEEEEECCCcce-Eehhc-CC-CceEEEEEEeCCCEEEEEECCCCcEEE--EECC
Confidence 3446799999988643 22222 22 24689999997654 555555688887 5554
No 309
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=77.14 E-value=5 Score=33.04 Aligned_cols=105 Identities=10% Similarity=0.061 Sum_probs=55.9
Q ss_pred eEEEEECCC----CccceeEecCCCCcceEEEEEccCCCEEEE-EeeCCeEEEEeecCCCCcceeEEEeccCCceEEeec
Q 032092 9 NLVVFNLQN----PQTEFKRINSPLKYQMRCVAAFPDQQGFWV-GSIEGRVGVHHLDDSQQSKNFTFKCHRDGSETCSVI 83 (147)
Q Consensus 9 ~v~iwdi~~----~~~~~~~~~~~~~~~i~~la~spdg~~l~~-g~~dg~i~i~~~d~~~~~~~~~~~~h~~~~~~~~v~ 83 (147)
.|.+-|.+. +......+..+ .+...+-++|||+++++ |-.+.++.+ +|.+..... |..--. ...
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~p--ksPHGv~vsPDGkyi~v~GKLsptvtV--~d~~k~~~~--~~~k~~-----~~~ 367 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVP--KNPHGCNTSSDGKYFIAAGKLSPTCSM--IAIDKLPDL--FAGKLA-----DPR 367 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEES--SSCCCEEECTTSCEEEEECTTSSBEEE--EEGGGHHHH--HTTCCS-----CGG
T ss_pred CeeEEccccccccCCceEEEEeCC--CCCcceeeCCCCCEEEEcCCCCCeEEE--EEeehhhhh--hhcccc-----Ccc
Confidence 477888876 32222222111 22456888999998765 556889999 554321000 000000 000
Q ss_pred cceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecCC
Q 032092 84 SFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKDS 140 (147)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~~ 140 (147)
+. +...+....|.+..+|.++|+-..|---|..|.-||+++
T Consensus 368 ~~----------------~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 368 DV----------------IVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp GG----------------EEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred cc----------------eEeeccCCCcccEEEECCCCceEeeeeecceEEEEeccH
Confidence 00 000000112333449999996666666799999999864
No 310
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=76.73 E-value=18 Score=25.78 Aligned_cols=24 Identities=13% Similarity=0.439 Sum_probs=18.1
Q ss_pred CCCeEEEeCCCC-----cEEEeecCCcee
Q 032092 120 IHHTFATAGSDG-----AFNFWDKDSKQR 143 (147)
Q Consensus 120 dg~~latg~~Dg-----~i~iWd~~~~~~ 143 (147)
++++++.||.++ .+.+||.++.+.
T Consensus 251 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 251 NGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 678888888664 589999887654
No 311
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=76.45 E-value=23 Score=26.89 Aligned_cols=58 Identities=12% Similarity=0.250 Sum_probs=32.1
Q ss_pred cCCeEEEEECCCCccceeE--ecCC----CCcceEEEEEcc--CCC--EEEEEee--CCeEEEEeecCCC
Q 032092 6 ADRNLVVFNLQNPQTEFKR--INSP----LKYQMRCVAAFP--DQQ--GFWVGSI--EGRVGVHHLDDSQ 63 (147)
Q Consensus 6 ~dg~v~iwdi~~~~~~~~~--~~~~----~~~~i~~la~sp--dg~--~l~~g~~--dg~i~i~~~d~~~ 63 (147)
.+|.|.++|..+....... +... ..+...-|.+.+ +++ .+++-.. +.+|.++.+|...
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~ 150 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEE 150 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTT
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCC
Confidence 6899999999853211112 2211 113356677766 454 4555444 5678887777653
No 312
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=75.90 E-value=11 Score=28.58 Aligned_cols=29 Identities=21% Similarity=0.259 Sum_probs=22.1
Q ss_pred EEEEEccCCCEEEEEe-eCCeEEEEeecCCCC
Q 032092 34 RCVAAFPDQQGFWVGS-IEGRVGVHHLDDSQQ 64 (147)
Q Consensus 34 ~~la~spdg~~l~~g~-~dg~i~i~~~d~~~~ 64 (147)
.+++|.+....|..++ ..|+|.. ||+..+
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~--~~~~~~ 45 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEV--YNPKTQ 45 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEE--ECTTTC
T ss_pred cCccCcCCCCEEEEEeccCCEEEE--EcCCCC
Confidence 5789988766777766 5899998 787544
No 313
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=75.62 E-value=23 Score=26.64 Aligned_cols=29 Identities=3% Similarity=-0.119 Sum_probs=19.4
Q ss_pred ceEEEEEccCCCEEE-EEeeCCeEEEEeecCC
Q 032092 32 QMRCVAAFPDQQGFW-VGSIEGRVGVHHLDDS 62 (147)
Q Consensus 32 ~i~~la~spdg~~l~-~g~~dg~i~i~~~d~~ 62 (147)
..+.|+++|+++.|. +=+..+.|.. +|..
T Consensus 247 ~PnGlavd~~~~~lY~aD~~~~~I~~--~d~d 276 (386)
T 3v65_B 247 WPNGLTIDYAGRRMYWVDAKHHVIER--ANLD 276 (386)
T ss_dssp CEEEEEEEGGGTEEEEEETTTTEEEE--ECTT
T ss_pred CeeeEEEeCCCCEEEEEECCCCEEEE--EeCC
Confidence 358899998765554 4455677877 5543
No 314
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=74.06 E-value=16 Score=29.98 Aligned_cols=15 Identities=0% Similarity=-0.228 Sum_probs=11.5
Q ss_pred eEEEEEccCCCEEEE
Q 032092 33 MRCVAAFPDQQGFWV 47 (147)
Q Consensus 33 i~~la~spdg~~l~~ 47 (147)
...|+|.++|..++.
T Consensus 478 PDnL~fd~~G~LWf~ 492 (592)
T 4a9v_A 478 PDGLGFDKAGRLWIL 492 (592)
T ss_dssp EEEEEECTTCCEEEE
T ss_pred CCceEECCCCCEEEE
Confidence 567999999887664
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=71.69 E-value=24 Score=25.07 Aligned_cols=24 Identities=17% Similarity=0.405 Sum_probs=17.3
Q ss_pred CCCeEEEeCCC-----CcEEEeecCCcee
Q 032092 120 IHHTFATAGSD-----GAFNFWDKDSKQR 143 (147)
Q Consensus 120 dg~~latg~~D-----g~i~iWd~~~~~~ 143 (147)
++++++.||.+ ..+.++|.++.+.
T Consensus 200 ~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 228 (306)
T 3ii7_A 200 KDKIFAVGGQNGLGGLDNVEYYDIKLNEW 228 (306)
T ss_dssp TTEEEEECCEETTEEBCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCCCceEEEeeCCCCcE
Confidence 66788887764 3688999877643
No 316
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=71.39 E-value=24 Score=24.96 Aligned_cols=24 Identities=21% Similarity=0.259 Sum_probs=17.9
Q ss_pred CCCeEEEeCCC-----CcEEEeecCCcee
Q 032092 120 IHHTFATAGSD-----GAFNFWDKDSKQR 143 (147)
Q Consensus 120 dg~~latg~~D-----g~i~iWd~~~~~~ 143 (147)
++++++.||.+ ..+.+||.++.+.
T Consensus 253 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 253 RGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp TTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred CCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 67788888776 3688999887654
No 317
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=70.76 E-value=33 Score=26.28 Aligned_cols=135 Identities=13% Similarity=0.171 Sum_probs=71.1
Q ss_pred CCeEEEEECCCCccceeEecCC---CCcceEEEEEccCCCEEEEEe-------eCCeEEEEeecCCCCcceeEEEeccCC
Q 032092 7 DRNLVVFNLQNPQTEFKRINSP---LKYQMRCVAAFPDQQGFWVGS-------IEGRVGVHHLDDSQQSKNFTFKCHRDG 76 (147)
Q Consensus 7 dg~v~iwdi~~~~~~~~~~~~~---~~~~i~~la~spdg~~l~~g~-------~dg~i~i~~~d~~~~~~~~~~~~h~~~ 76 (147)
+..|+-|++.....|.+.++.+ ...+|-....+|+.++++..+ ..|.+.| +... .+..+.+.||...
T Consensus 125 ~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQL--YS~e-r~~sQ~ieGhaa~ 201 (365)
T 2xzh_A 125 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQL--YSVD-RKVSQPIEGHAAS 201 (365)
T ss_dssp SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEE--EETT-TTEEEEECCSEEE
T ss_pred CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEE--Eeec-ccccceeeeeeee
Confidence 4678899997655566555432 235688888899999876543 3466777 4433 2344556666431
Q ss_pred c--------------eEEeecc-----ceeeeecCCC-cceeeeeeeee-eeeeec------eEEEEEecCCCeEEEeCC
Q 032092 77 S--------------ETCSVIS-----FTSILAGDAP-KYSSFYKVKRL-HLFVKS------HVIVLFVQIHHTFATAGS 129 (147)
Q Consensus 77 ~--------------~~~~v~~-----~~~~~~~~~~-~~~~~~~~~~~-~~~~~~------~~~~~fspdg~~latg~~ 129 (147)
- .++.... +-++-.|..+ +-.-+ .++. -..++. .+++..|+....+.-=..
T Consensus 202 F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f--~kk~vdi~fppea~~DFPVamqvs~kygviyviTK 279 (365)
T 2xzh_A 202 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF--PKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK 279 (365)
T ss_dssp EEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCC--CCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEET
T ss_pred eEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCc--ccccceeeCCccccCCceEEEEecccCCEEEEEeC
Confidence 0 0111110 0001112110 00000 0011 111111 245677776555544456
Q ss_pred CCcEEEeecCCceeeec
Q 032092 130 DGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 130 Dg~i~iWd~~~~~~~~~ 146 (147)
=|.|+++|++++.+++.
T Consensus 280 ~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 280 YGYIHLYDLETGTCIYM 296 (365)
T ss_dssp TSEEEEEETTTCCEEEE
T ss_pred CcEEEEEEcccCcEEEE
Confidence 78999999999999873
No 318
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=68.66 E-value=43 Score=26.75 Aligned_cols=135 Identities=13% Similarity=0.162 Sum_probs=72.8
Q ss_pred CCeEEEEECCCCccceeEecCC---CCcceEEEEEccCCCEEEEEe-------eCCeEEEEeecCCCCcceeEEEeccCC
Q 032092 7 DRNLVVFNLQNPQTEFKRINSP---LKYQMRCVAAFPDQQGFWVGS-------IEGRVGVHHLDDSQQSKNFTFKCHRDG 76 (147)
Q Consensus 7 dg~v~iwdi~~~~~~~~~~~~~---~~~~i~~la~spdg~~l~~g~-------~dg~i~i~~~d~~~~~~~~~~~~h~~~ 76 (147)
+..|+-|++.....|++.++.. ...+|-....+|+.++++..+ ..|.+.++..+. +..+.+.||...
T Consensus 124 ~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er---~~sQ~ieGhaa~ 200 (494)
T 1bpo_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR---KVSQPIEGHAAS 200 (494)
T ss_dssp SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT---CCEEEECCSEEE
T ss_pred CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc---cccchheeeeee
Confidence 5679999997655566655432 235688888899999877433 356778844433 344555666431
Q ss_pred c--------------eEEeeccc---ee--eeecCCC-cceeeeeeeee-eeee------eceEEEEEecCCCeEEEeCC
Q 032092 77 S--------------ETCSVISF---TS--ILAGDAP-KYSSFYKVKRL-HLFV------KSHVIVLFVQIHHTFATAGS 129 (147)
Q Consensus 77 ~--------------~~~~v~~~---~~--~~~~~~~-~~~~~~~~~~~-~~~~------~~~~~~~fspdg~~latg~~ 129 (147)
- .++..... .+ +-.|..+ +-..+. ++. -..+ .-.+++..|+....+.--..
T Consensus 201 F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~--kk~vdv~fppe~~~DFPvamqvs~kygviyviTK 278 (494)
T 1bpo_A 201 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFP--KKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK 278 (494)
T ss_dssp EEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCC--CEEEECCCCTTSTTCCEEEEEEETTTTEEEEEET
T ss_pred eEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCcc--ceeeeeeCCcccccCceeEEEecccCCEEEEEec
Confidence 0 12222210 11 1112221 100000 111 1111 11245677886655555556
Q ss_pred CCcEEEeecCCceeeec
Q 032092 130 DGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 130 Dg~i~iWd~~~~~~~~~ 146 (147)
-|.|+++|++++.+++.
T Consensus 279 ~G~i~lyDleTgt~i~~ 295 (494)
T 1bpo_A 279 YGYIHLYDLETGTCIYM 295 (494)
T ss_dssp TSEEEEEETTTCCEEEE
T ss_pred CceEEEEecccceeeee
Confidence 78999999999998863
No 319
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=68.50 E-value=30 Score=25.73 Aligned_cols=46 Identities=9% Similarity=0.035 Sum_probs=23.7
Q ss_pred eEeecCCeEEEEECCCCc-cceeEe---cCCCCcceEEEEEccC----CCEEEE
Q 032092 2 VVGTADRNLVVFNLQNPQ-TEFKRI---NSPLKYQMRCVAAFPD----QQGFWV 47 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~-~~~~~~---~~~~~~~i~~la~spd----g~~l~~ 47 (147)
.++...|.|++++..... .++..+ ..........|+++|+ +..+++
T Consensus 33 ~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 33 LITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp EEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred EEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 345567888888853211 111111 0111224688999996 444444
No 320
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=68.42 E-value=40 Score=26.23 Aligned_cols=15 Identities=13% Similarity=0.164 Sum_probs=11.6
Q ss_pred EEEEecCCCeEEEeC
Q 032092 114 IVLFVQIHHTFATAG 128 (147)
Q Consensus 114 ~~~fspdg~~latg~ 128 (147)
.++|.|||+++++-+
T Consensus 148 ~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 148 RLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEECTTSCEEEEEC
T ss_pred eEeECCCCeEEEEEC
Confidence 469999998766654
No 321
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=67.83 E-value=55 Score=27.62 Aligned_cols=60 Identities=5% Similarity=-0.039 Sum_probs=31.3
Q ss_pred cCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEee-C-CeEEEEeecCCCCcceeEE
Q 032092 6 ADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGSI-E-GRVGVHHLDDSQQSKNFTF 70 (147)
Q Consensus 6 ~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~~-d-g~i~i~~~d~~~~~~~~~~ 70 (147)
..+.|.+.|+..... ...+.... ...+.||+.|.+..|..... + ++|.. .++. |.....+
T Consensus 491 ~~~~I~v~~ldG~~~-~~l~~~~l-~~P~gIaVDp~~g~LYwtD~g~~~~I~~--~~~d-G~~~~~l 552 (791)
T 3m0c_C 491 VLGTVSVADTKGVKR-KTLFRENG-SKPRAIVVDPVHGFMYWTDWGTPAKIKK--GGLN-GVDIYSL 552 (791)
T ss_dssp TTTEEEEEETTSSSE-EEEEECTT-CCEEEEEEETTTTEEEEEECSSSCEEEE--EETT-SCCEEEE
T ss_pred CCCeEEEEeCCCCeE-EEEEeCCC-CCcceEEEecCCCCEEEecCCCCCeEEE--EecC-CCceEEE
Confidence 345666777664321 11122222 24689999997555544443 2 67777 5543 3333333
No 322
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=67.30 E-value=38 Score=25.63 Aligned_cols=29 Identities=24% Similarity=0.250 Sum_probs=20.5
Q ss_pred ceEEEEEccC-CCEEEEEeeCCeEEEEeecCC
Q 032092 32 QMRCVAAFPD-QQGFWVGSIEGRVGVHHLDDS 62 (147)
Q Consensus 32 ~i~~la~spd-g~~l~~g~~dg~i~i~~~d~~ 62 (147)
....||+.+. ++.+++-...++|.+ +++.
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~--~~~~ 189 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSV--ADTK 189 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEE--ECTT
T ss_pred CcccEEEEecCCceEEEECCCCeEEE--EeCC
Confidence 4678999985 555566666788887 6664
No 323
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=64.52 E-value=20 Score=28.02 Aligned_cols=19 Identities=21% Similarity=0.130 Sum_probs=14.5
Q ss_pred ceEEEEEccCCCEEEEEee
Q 032092 32 QMRCVAAFPDQQGFWVGSI 50 (147)
Q Consensus 32 ~i~~la~spdg~~l~~g~~ 50 (147)
....|+|.|||..+++-+.
T Consensus 145 ~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 145 QSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CEEEEEECTTSCEEEEECC
T ss_pred CCCeEeECCCCeEEEEECC
Confidence 3688999999987776443
No 324
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=62.23 E-value=16 Score=27.24 Aligned_cols=16 Identities=6% Similarity=-0.390 Sum_probs=12.0
Q ss_pred eEEEEEccCCCEEEEE
Q 032092 33 MRCVAAFPDQQGFWVG 48 (147)
Q Consensus 33 i~~la~spdg~~l~~g 48 (147)
...|+|.|||..+++-
T Consensus 132 ~~~l~~~pdG~Lyv~~ 147 (353)
T 2g8s_A 132 GGRLVFDGKGYLFIAL 147 (353)
T ss_dssp CCCEEECSSSEEEEEE
T ss_pred CccEEECCCCcEEEEE
Confidence 4679999999665554
No 325
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=60.68 E-value=28 Score=28.81 Aligned_cols=55 Identities=15% Similarity=0.105 Sum_probs=35.6
Q ss_pred eEeecCCeEE-EEECCCCccceeEecC-CCCcceEEEEEccCC--CEEEEEeeCCeEEE
Q 032092 2 VVGTADRNLV-VFNLQNPQTEFKRINS-PLKYQMRCVAAFPDQ--QGFWVGSIEGRVGV 56 (147)
Q Consensus 2 ~~gs~dg~v~-iwdi~~~~~~~~~~~~-~~~~~i~~la~spdg--~~l~~g~~dg~i~i 56 (147)
..|+.+|.|. +-...........+.. +...+|+.|.++++. +.|.+++..+-++|
T Consensus 419 flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 419 FVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 5688888774 4455443222222211 223578999999988 89999998887776
No 326
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=60.29 E-value=8.5 Score=31.72 Aligned_cols=60 Identities=10% Similarity=0.076 Sum_probs=38.0
Q ss_pred eEeecCCeEEEEECCCCccce--------eEe--cCCCCcceEEEEEccCCCEEEEEeeCCeEEEEeecC
Q 032092 2 VVGTADRNLVVFNLQNPQTEF--------KRI--NSPLKYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDD 61 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~--------~~~--~~~~~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~ 61 (147)
+.|--+.+|.++|++.....+ ..+ +.+..-...-.+|.++|.-+.+-..|.+|..|+++.
T Consensus 339 v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 339 AAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp EECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred EcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEeccH
Confidence 344457789999988532110 000 111112357789999997777788999999966654
No 327
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=59.71 E-value=54 Score=24.72 Aligned_cols=39 Identities=13% Similarity=0.201 Sum_probs=21.8
Q ss_pred Eeec-CCeEEEEECCCCcc-ceeEec---CCCCcceEEEEEccC
Q 032092 3 VGTA-DRNLVVFNLQNPQT-EFKRIN---SPLKYQMRCVAAFPD 41 (147)
Q Consensus 3 ~gs~-dg~v~iwdi~~~~~-~~~~~~---~~~~~~i~~la~spd 41 (147)
++.. .|.|++++...++. ++..+. .........|+++||
T Consensus 47 Vter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 47 VSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPD 90 (347)
T ss_dssp EEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTT
T ss_pred EEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccc
Confidence 3344 78888888765542 111111 111234789999996
No 328
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=59.19 E-value=21 Score=27.41 Aligned_cols=30 Identities=10% Similarity=0.272 Sum_probs=20.0
Q ss_pred EEecCCCeEEEeCCCCcEEEeecCCceeeec
Q 032092 116 LFVQIHHTFATAGSDGAFNFWDKDSKQRLKV 146 (147)
Q Consensus 116 ~fspdg~~latg~~Dg~i~iWd~~~~~~~~~ 146 (147)
-.||..+.+|--. ..++.|+|++++++++.
T Consensus 73 IMnP~~~ViALra-g~~LQiFnletK~klks 102 (365)
T 2xzh_A 73 IMNPASKVIALKA-GKTLQIFNIEMKSKMKA 102 (365)
T ss_dssp EECSSSSEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred eeCCCccEEEEec-CCeEEEechHHhhhhcc
Confidence 5677766666554 45677777777777665
No 329
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=58.62 E-value=98 Score=27.38 Aligned_cols=107 Identities=10% Similarity=0.040 Sum_probs=60.6
Q ss_pred cCCeEEEEECCCCccceeEecCCCCcceEEEEE-ccC---CCEEEEEeeCCeEEEEeecCCCCcc-eeEEEeccCCceEE
Q 032092 6 ADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAA-FPD---QQGFWVGSIEGRVGVHHLDDSQQSK-NFTFKCHRDGSETC 80 (147)
Q Consensus 6 ~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~-spd---g~~l~~g~~dg~i~i~~~d~~~~~~-~~~~~~h~~~~~~~ 80 (147)
..+.+.||.+...+ .....+.+.-..|++|+. .|. .++|+.++.++++.+..||...++. +.+..-|...
T Consensus 53 k~~~Lel~~~~~~~-L~~v~~~~l~G~I~~l~~~r~~g~~~D~L~v~td~~~~~il~~d~~~~~~~~~t~~~~~~~---- 127 (1158)
T 3ei3_A 53 KNTRLEIYVVTAEG-LRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQ---- 127 (1158)
T ss_dssp ETTEEEEEEEETTE-EEEEEEEECSSCEEEEEEECCTTCSSCEEEEEETTCEEEEEEEEC-CCCCEEEEEEEEECC----
T ss_pred cCCEEEEEEEcccc-eEEEEEEEcccEEEEEEEEcCCCCCceEEEEEeCCceEEEEEEcCCCCceeEEEEeccccc----
Confidence 34678999887643 211112223346888754 443 4799999999999999999864332 1121111110
Q ss_pred eeccceeeeecCCCcceeeeeeeeeeeeeeceEEEEEecCCCeEEEeCCCCcEEEeecC
Q 032092 81 SVISFTSILAGDAPKYSSFYKVKRLHLFVKSHVIVLFVQIHHTFATAGSDGAFNFWDKD 139 (147)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~latg~~Dg~i~iWd~~ 139 (147)
... |... . +| ..++..|.|+.++-...++...|+-++
T Consensus 128 --~~~-----~r~~-----~---------~g-~~l~vDP~gR~~~l~~~e~~~~v~pl~ 164 (1158)
T 3ei3_A 128 --DRI-----GRPS-----E---------TG-IIGIIDPECRMIGLRLYDGLFKVIPLD 164 (1158)
T ss_dssp --CSS-----CCBC-----T---------TC-CEEEECTTSSEEEEECBTTEEEEEECC
T ss_pred --cCc-----cccC-----C---------CC-CEEEEcCCCCEEEEEeccCEEEEEEec
Confidence 000 0000 0 00 013778999988888888888887764
No 330
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=58.46 E-value=48 Score=23.80 Aligned_cols=24 Identities=8% Similarity=-0.027 Sum_probs=19.9
Q ss_pred EEEEEccCCCEEEEEeeCCeEEEEeecC
Q 032092 34 RCVAAFPDQQGFWVGSIEGRVGVHHLDD 61 (147)
Q Consensus 34 ~~la~spdg~~l~~g~~dg~i~i~~~d~ 61 (147)
.++.|.|+|.++++ .||.|.- ++.
T Consensus 91 ~a~~fD~~G~LYav--~dG~iyr--~~p 114 (236)
T 1tl2_A 91 QFLFFDPNGYLYAV--SKDKLYK--ASP 114 (236)
T ss_dssp SEEEECTTSCEEEE--ETTEEEE--ESC
T ss_pred eEEEECCCCCEEEe--CCCEEEE--eCC
Confidence 78999999999888 6698865 665
No 331
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=57.81 E-value=52 Score=23.94 Aligned_cols=24 Identities=25% Similarity=0.141 Sum_probs=17.2
Q ss_pred cceEEEEEccCCCEEEEEeeCCeEE
Q 032092 31 YQMRCVAAFPDQQGFWVGSIEGRVG 55 (147)
Q Consensus 31 ~~i~~la~spdg~~l~~g~~dg~i~ 55 (147)
..+..+++.|+++.++++. +|.+.
T Consensus 163 ~~~~~~~~~~~~~~~~~g~-~G~~~ 186 (327)
T 2xbg_A 163 GVMRNLNRSPSGEYVAVSS-RGSFY 186 (327)
T ss_dssp CCEEEEEECTTSCEEEEET-TSSEE
T ss_pred cceEEEEEcCCCcEEEEEC-CCcEE
Confidence 3578899999888777664 45554
No 332
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=57.78 E-value=48 Score=23.59 Aligned_cols=24 Identities=17% Similarity=0.353 Sum_probs=18.0
Q ss_pred CCCeEEEeCCC-----CcEEEeecCCcee
Q 032092 120 IHHTFATAGSD-----GAFNFWDKDSKQR 143 (147)
Q Consensus 120 dg~~latg~~D-----g~i~iWd~~~~~~ 143 (147)
++++++.||.+ ..+.+||.++.+.
T Consensus 215 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 215 HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 66788888765 4689999887654
No 333
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=54.83 E-value=75 Score=24.87 Aligned_cols=40 Identities=8% Similarity=0.120 Sum_probs=22.4
Q ss_pred eEeecCCeEEEEECCCCc--cceeEecC----C----CCcceEEEEEccC
Q 032092 2 VVGTADRNLVVFNLQNPQ--TEFKRINS----P----LKYQMRCVAAFPD 41 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~--~~~~~~~~----~----~~~~i~~la~spd 41 (147)
.++...|.|++++..... .++..+.. . .+..+..||++|+
T Consensus 30 ~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 30 FILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp EEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred EEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 455678899999754321 12222211 0 1234788999996
No 334
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=54.50 E-value=56 Score=23.30 Aligned_cols=50 Identities=12% Similarity=0.256 Sum_probs=25.7
Q ss_pred CeEEEEECCCCccceeEecC-C-CCcceEEEEEccCCCEEEEEee-C-----CeEEEEeecCCC
Q 032092 8 RNLVVFNLQNPQTEFKRINS-P-LKYQMRCVAAFPDQQGFWVGSI-E-----GRVGVHHLDDSQ 63 (147)
Q Consensus 8 g~v~iwdi~~~~~~~~~~~~-~-~~~~i~~la~spdg~~l~~g~~-d-----g~i~i~~~d~~~ 63 (147)
..+.+||..+.+ -..+.. + .... .+++ .-+++.++.|+. + ..+.+ +|+.+
T Consensus 117 ~~~~~~d~~~~~--W~~~~~~p~~r~~-~~~~-~~~~~iyv~GG~~~~~~~~~~~~~--yd~~~ 174 (315)
T 4asc_A 117 DSVMCYDRLSFK--WGESDPLPYVVYG-HTVL-SHMDLVYVIGGKGSDRKCLNKMCV--YDPKK 174 (315)
T ss_dssp CCEEEEETTTTE--EEECCCCSSCCBS-CEEE-EETTEEEEECCBCTTSCBCCCEEE--EETTT
T ss_pred ceEEEECCCCCc--EeECCCCCCcccc-eeEE-EECCEEEEEeCCCCCCcccceEEE--EeCCC
Confidence 457888888753 122211 1 1111 1222 245778888876 2 34655 67654
No 335
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=52.91 E-value=48 Score=26.36 Aligned_cols=55 Identities=15% Similarity=0.265 Sum_probs=34.2
Q ss_pred eEeecCCeEE-EEECCCCc------cceeEecC-CCCcceEEEEEccCCCEEEEEeeCCeEEE
Q 032092 2 VVGTADRNLV-VFNLQNPQ------TEFKRINS-PLKYQMRCVAAFPDQQGFWVGSIEGRVGV 56 (147)
Q Consensus 2 ~~gs~dg~v~-iwdi~~~~------~~~~~~~~-~~~~~i~~la~spdg~~l~~g~~dg~i~i 56 (147)
..|+.+|.|. +.-...+. ..+..+.- +...+|+.|.++|+.++|.+++.++-++|
T Consensus 425 flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 425 FIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 5688888774 33332221 11222221 12357999999999999999998887775
No 336
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=52.74 E-value=60 Score=23.13 Aligned_cols=24 Identities=8% Similarity=0.115 Sum_probs=17.4
Q ss_pred CCCeEEEeCCCC-----cEEEeecCCcee
Q 032092 120 IHHTFATAGSDG-----AFNFWDKDSKQR 143 (147)
Q Consensus 120 dg~~latg~~Dg-----~i~iWd~~~~~~ 143 (147)
++++++.||.++ .+.++|.++.+.
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred CCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 667888887654 588889877643
No 337
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=51.77 E-value=24 Score=30.43 Aligned_cols=37 Identities=16% Similarity=0.059 Sum_probs=29.6
Q ss_pred ceEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEE
Q 032092 32 QMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTF 70 (147)
Q Consensus 32 ~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~ 70 (147)
.+.+++..++..++.+-+.|+++++ |+..+++.+.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRi--Wsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKV--LDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEE--EETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEE--EECCCCCeEeee
Confidence 3677888888889999999999999 777777666554
No 338
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=50.75 E-value=48 Score=27.54 Aligned_cols=55 Identities=15% Similarity=0.233 Sum_probs=34.7
Q ss_pred eEeecCCeEE-EEECCCCcc------ceeEec-CCCCcceEEEEEccCCCEEEEEeeCCeEEE
Q 032092 2 VVGTADRNLV-VFNLQNPQT------EFKRIN-SPLKYQMRCVAAFPDQQGFWVGSIEGRVGV 56 (147)
Q Consensus 2 ~~gs~dg~v~-iwdi~~~~~------~~~~~~-~~~~~~i~~la~spdg~~l~~g~~dg~i~i 56 (147)
..|+++|.|. +.-...... .+..+. .+...+|..|.++++.+.|.+++.++-++|
T Consensus 433 FLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 433 FIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4678888774 444333211 111111 122347899999999999999999888876
No 339
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=50.40 E-value=71 Score=23.29 Aligned_cols=59 Identities=8% Similarity=0.055 Sum_probs=32.3
Q ss_pred CCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEe--eCCeEEEEeecCCCCcceeEEEec
Q 032092 7 DRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGS--IEGRVGVHHLDDSQQSKNFTFKCH 73 (147)
Q Consensus 7 dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~--~dg~i~i~~~d~~~~~~~~~~~~h 73 (147)
...|+..++...+. ..+.. . ...+++|+++.|+-.. .++.-.|+-+++. +.....+..+
T Consensus 87 ~~~Iy~i~~dg~~~--~~l~~---~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d-Gs~~~~lt~~ 147 (302)
T 3s25_A 87 RNSLCRIKRNGHGS--TVLDP---D--PCIYASLIGNYIYYLHYDTQTATSLYRIRID-GEEKKKIKNH 147 (302)
T ss_dssp SEEEEEEETTSCCC--EEEEC---S--CEEEEEEETTEEEEEEESSSSCEEEEEEETT-SCCCEEEESS
T ss_pred CCeEEEEeCCCCcc--eEeec---C--CccEEEEeCCEEEEEeecCCCCceEEEEECC-CCCeEEEeCC
Confidence 34677777776542 22321 1 2347889999888765 2344444436664 3444445433
No 340
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=48.69 E-value=1.1e+02 Score=24.86 Aligned_cols=51 Identities=12% Similarity=0.068 Sum_probs=27.6
Q ss_pred ecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEEe-eCCeEEE
Q 032092 5 TADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVGS-IEGRVGV 56 (147)
Q Consensus 5 s~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g~-~dg~i~i 56 (147)
+....|+..|+.............. ..+..|+|+|.++.+.... ..++|..
T Consensus 15 ~~~~~I~~i~~~~~~~~~~~~~~~~-~~~~~ld~~~~~~~ly~sD~~~~~I~r 66 (619)
T 3s94_A 15 ANRRDLRLVDATNGKENATIVVGGL-EDAAAVDFVFSHGLIYWSDVSEEAIKR 66 (619)
T ss_dssp ECSSBEEEECCC---------CBCC-SCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred eccccEEEEeCCCCcceEEEEEcCC-CceEEEEEEeCCCEEEEEECCCCeEEE
Confidence 3457889999976421111111122 2467899999766555444 4677776
No 341
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=48.16 E-value=69 Score=22.50 Aligned_cols=24 Identities=13% Similarity=0.227 Sum_probs=17.5
Q ss_pred CCCeEEEeCCC-----CcEEEeecCCcee
Q 032092 120 IHHTFATAGSD-----GAFNFWDKDSKQR 143 (147)
Q Consensus 120 dg~~latg~~D-----g~i~iWd~~~~~~ 143 (147)
++++++.||.+ ..+.++|.++.+.
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W 187 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHW 187 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcE
Confidence 67788888765 3688899877643
No 342
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=43.75 E-value=1.3e+02 Score=24.38 Aligned_cols=49 Identities=18% Similarity=0.143 Sum_probs=27.1
Q ss_pred ecCCeEEEEECCCCccceeEec-CCCCcceEEEEEccCCCEEEEEee--CCeEEE
Q 032092 5 TADRNLVVFNLQNPQTEFKRIN-SPLKYQMRCVAAFPDQQGFWVGSI--EGRVGV 56 (147)
Q Consensus 5 s~dg~v~iwdi~~~~~~~~~~~-~~~~~~i~~la~spdg~~l~~g~~--dg~i~i 56 (147)
...+.|.+.|+..... ..+. ... ...+.|++.|.+..|..... .+.|..
T Consensus 103 ~~~~~I~v~~~dG~~~--~~l~~~~l-~~P~~Iavdp~~g~ly~tD~g~~~~I~r 154 (619)
T 3s94_A 103 SETNRIEVSNLDGSLR--KVLFWQEL-DQPRAIALDPSSGFMYWTDWGEVPKIER 154 (619)
T ss_dssp TTTTEEEEEETTSCSC--EEEECSSC-SCCCCEEEETTTTEEEEEECSSSCEEEE
T ss_pred CCCCEEEEEECCCCCE--EEEEeCCC-CCCceEEEecCCCeEEEeccCCCCEEEE
Confidence 3456777777765422 1222 222 24688999997554444443 356655
No 343
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=41.04 E-value=67 Score=25.83 Aligned_cols=55 Identities=11% Similarity=0.071 Sum_probs=35.7
Q ss_pred eEeecCCeEEEEECC-CCc-cceeEecCCCCcce-EEEEEccCCCEEEEEeeCCeEEE
Q 032092 2 VVGTADRNLVVFNLQ-NPQ-TEFKRINSPLKYQM-RCVAAFPDQQGFWVGSIEGRVGV 56 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~-~~~-~~~~~~~~~~~~~i-~~la~spdg~~l~~g~~dg~i~i 56 (147)
..|+++|.|.-.=+. ..+ .....+.-+...+| +.|.++++...|.+++..+-++|
T Consensus 404 FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 404 FLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp EEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred EEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 468889988644333 222 12222322223467 58999999999999999888876
No 344
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=40.29 E-value=73 Score=26.07 Aligned_cols=55 Identities=11% Similarity=0.088 Sum_probs=34.6
Q ss_pred eEeecCCeEE-EEECCCCcc--c--eeEecC-CCCcceEEEEEccCCCEEEEEeeCCeEEE
Q 032092 2 VVGTADRNLV-VFNLQNPQT--E--FKRINS-PLKYQMRCVAAFPDQQGFWVGSIEGRVGV 56 (147)
Q Consensus 2 ~~gs~dg~v~-iwdi~~~~~--~--~~~~~~-~~~~~i~~la~spdg~~l~~g~~dg~i~i 56 (147)
..|+++|.|. +.....+.. . ...+.. ....+|+.|.++++...|.+++.++-++|
T Consensus 384 FLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 384 YLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 4678888775 333332210 1 111211 12347899999999999999998887776
No 345
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=39.68 E-value=22 Score=31.12 Aligned_cols=36 Identities=17% Similarity=0.061 Sum_probs=28.2
Q ss_pred eEEEEEccCCCEEEEEeeCCeEEEEeecCCCCcceeEE
Q 032092 33 MRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTF 70 (147)
Q Consensus 33 i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~ 70 (147)
+-+++..++..++.+-+.|++++| |+..+++.+.+.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRi--Wsl~t~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKV--LDLSTNQCVETI 275 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEE--EETTTTEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEE--EECCCCCeEEee
Confidence 455667788889999999999999 777777666554
No 346
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=39.47 E-value=37 Score=27.35 Aligned_cols=56 Identities=18% Similarity=0.137 Sum_probs=35.3
Q ss_pred CeEeecCCeEEEEECCCCcc---ceeEecC-CCCcceE-EEEEccCCCEEEEEeeCCeEEE
Q 032092 1 MVVGTADRNLVVFNLQNPQT---EFKRINS-PLKYQMR-CVAAFPDQQGFWVGSIEGRVGV 56 (147)
Q Consensus 1 l~~gs~dg~v~iwdi~~~~~---~~~~~~~-~~~~~i~-~la~spdg~~l~~g~~dg~i~i 56 (147)
+..|+.+|.|.-.-+..... ....+.- +...+|. .|.++|+++.|.+++..+-++|
T Consensus 416 ~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 416 VFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 35688899876555543211 1222211 1134674 8999999999999988777765
No 347
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=38.12 E-value=73 Score=26.12 Aligned_cols=39 Identities=15% Similarity=0.341 Sum_probs=23.8
Q ss_pred eEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEEE
Q 032092 9 NLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWVG 48 (147)
Q Consensus 9 ~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~g 48 (147)
.|..+|..+++. ......+....++-++|+||+++|.+.
T Consensus 510 ~v~~~dp~tGel-~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 510 QMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEEEEeCCCCeE-EEEEeCCCCccccCCEECCCCCEEEEE
Confidence 566666666642 222222333467899999999877654
No 348
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=34.31 E-value=1.2e+02 Score=21.43 Aligned_cols=41 Identities=7% Similarity=0.189 Sum_probs=20.2
Q ss_pred CeEEEEECCCCccceeEecC-C-CCcceEEEEEccCCCEEEEEeeCC
Q 032092 8 RNLVVFNLQNPQTEFKRINS-P-LKYQMRCVAAFPDQQGFWVGSIEG 52 (147)
Q Consensus 8 g~v~iwdi~~~~~~~~~~~~-~-~~~~i~~la~spdg~~l~~g~~dg 52 (147)
..+.+||+.+.+ -..+.. + ....-.++. -+++.++.|+.++
T Consensus 175 ~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~ 217 (318)
T 2woz_A 175 NRVFIYNPKKGD--WKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTE 217 (318)
T ss_dssp CCEEEEETTTTE--EEEECCCSSCCBSCEEEE--ETTEEEEEEEEET
T ss_pred ceEEEEcCCCCE--EEECCCCCCCcccceEEE--ECCEEEEEcCcCC
Confidence 357888888753 222211 1 111112222 3577788887543
No 349
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=33.97 E-value=1.3e+02 Score=24.36 Aligned_cols=26 Identities=8% Similarity=-0.010 Sum_probs=22.7
Q ss_pred cceEEEEEccCCCEEEEEeeCCeEEE
Q 032092 31 YQMRCVAAFPDQQGFWVGSIEGRVGV 56 (147)
Q Consensus 31 ~~i~~la~spdg~~l~~g~~dg~i~i 56 (147)
.+|..|.++++...|.+++.++-++|
T Consensus 470 ~pI~~L~ls~~~~~LYV~s~~~V~qV 495 (565)
T 3oky_B 470 KRIMGMQLDRASGSLYVAFSTCVIKV 495 (565)
T ss_dssp CCCCEEEEEGGGTEEEEECSSCEEEE
T ss_pred CceEEEEEcCCCCEEEEEecCeEEEe
Confidence 46889999999999999999888876
No 350
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=32.47 E-value=1.4e+02 Score=21.49 Aligned_cols=13 Identities=15% Similarity=0.133 Sum_probs=9.1
Q ss_pred CcEEEeecCCcee
Q 032092 131 GAFNFWDKDSKQR 143 (147)
Q Consensus 131 g~i~iWd~~~~~~ 143 (147)
..+.++|..+.+.
T Consensus 168 ~~v~~yd~~~~~W 180 (357)
T 2uvk_A 168 KFLLSFDPSTQQW 180 (357)
T ss_dssp CEEEEEETTTTEE
T ss_pred ccEEEEeCCCCcE
Confidence 4688888876543
No 351
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=32.39 E-value=2e+02 Score=23.30 Aligned_cols=50 Identities=14% Similarity=0.117 Sum_probs=26.8
Q ss_pred ecCCeEEEEECCCCccceeEecCCCCcceEEEEEcc-CCCEEEEEeeCC--eEEE
Q 032092 5 TADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFP-DQQGFWVGSIEG--RVGV 56 (147)
Q Consensus 5 s~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~sp-dg~~l~~g~~dg--~i~i 56 (147)
+..+.|.+.++... . ...+....-...+.|++.| +|..+.+-.... .|..
T Consensus 408 ~~~~~I~v~~~~G~-~-~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r 460 (628)
T 4a0p_A 408 EATNVINVTRLDGR-S-VGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIER 460 (628)
T ss_dssp TTTTEEEEEETTSC-E-EEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEE
T ss_pred CCCCEEEEEECCCC-e-EEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEE
Confidence 44566777777532 1 1222211123479999999 566666644333 4544
No 352
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=31.96 E-value=1.3e+02 Score=21.02 Aligned_cols=24 Identities=21% Similarity=0.443 Sum_probs=17.9
Q ss_pred CCCeEEEeCCCC-----cEEEeecCCcee
Q 032092 120 IHHTFATAGSDG-----AFNFWDKDSKQR 143 (147)
Q Consensus 120 dg~~latg~~Dg-----~i~iWd~~~~~~ 143 (147)
++++++.||.++ .+.++|.++.+.
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 232 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAW 232 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCE
Confidence 678888887653 688999887653
No 353
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=31.29 E-value=10 Score=30.09 Aligned_cols=19 Identities=37% Similarity=0.740 Sum_probs=12.7
Q ss_pred EeCCCCcEEEeecCCceee
Q 032092 126 TAGSDGAFNFWDKDSKQRL 144 (147)
Q Consensus 126 tg~~Dg~i~iWd~~~~~~~ 144 (147)
.++.+|.|+|||+++..++
T Consensus 162 ~~~~~GVVrvWDVkd~slL 180 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNAELL 180 (577)
T ss_dssp ----CCEECSEECSCGGGG
T ss_pred CCCCCCeEEEEecCCHHHH
Confidence 6678999999999886554
No 354
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=29.53 E-value=27 Score=21.51 Aligned_cols=16 Identities=13% Similarity=0.368 Sum_probs=13.6
Q ss_pred cEEEeecCCceeeecC
Q 032092 132 AFNFWDKDSKQRLKVF 147 (147)
Q Consensus 132 ~i~iWd~~~~~~~~~~ 147 (147)
.|.|||..+|.++.||
T Consensus 18 ~V~IvNvnNG~RfeTY 33 (97)
T 1uhe_A 18 KVEIVDVNNGERFSTY 33 (97)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCceEEEE
Confidence 5889999999988876
No 355
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=28.68 E-value=28 Score=21.36 Aligned_cols=16 Identities=19% Similarity=0.486 Sum_probs=13.7
Q ss_pred cEEEeecCCceeeecC
Q 032092 132 AFNFWDKDSKQRLKVF 147 (147)
Q Consensus 132 ~i~iWd~~~~~~~~~~ 147 (147)
.|.|||..+|.++.||
T Consensus 19 ~V~IvNvnNG~Rf~TY 34 (96)
T 1vc3_B 19 QVDIYDITNGARLTTY 34 (96)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCceEEEE
Confidence 5889999999988876
No 356
>2wl1_A Pyrin, marenostrin; amyloidosis, polymorphism, cytoskeleton, actin-binding inflammatory response, metal-binding, signaling protein; 1.35A {Homo sapiens}
Probab=27.70 E-value=33 Score=23.49 Aligned_cols=20 Identities=15% Similarity=0.441 Sum_probs=17.4
Q ss_pred CCCCcEEEeecCCceeeecC
Q 032092 128 GSDGAFNFWDKDSKQRLKVF 147 (147)
Q Consensus 128 ~~Dg~i~iWd~~~~~~~~~~ 147 (147)
...|.|-++|+.++..|++|
T Consensus 139 ye~G~lSFY~v~~~~~i~tF 158 (191)
T 2wl1_A 139 YRVGSISFYNVTARSHIYTF 158 (191)
T ss_dssp TTTTEEEEEETTTTEEEEEE
T ss_pred cCCCEEEEEECCCCcceEEe
Confidence 34789999999999999987
No 357
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=27.16 E-value=31 Score=21.42 Aligned_cols=16 Identities=6% Similarity=0.277 Sum_probs=13.5
Q ss_pred cEEEeecCCceeeecC
Q 032092 132 AFNFWDKDSKQRLKVF 147 (147)
Q Consensus 132 ~i~iWd~~~~~~~~~~ 147 (147)
.|.|||..+|.++.||
T Consensus 19 ~V~I~NvnNG~Rf~TY 34 (102)
T 3plx_B 19 KVQVVNVNNGARFETY 34 (102)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCcEEEEE
Confidence 5889999999888775
No 358
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=26.34 E-value=2.1e+02 Score=22.92 Aligned_cols=26 Identities=19% Similarity=0.353 Sum_probs=17.1
Q ss_pred ceEEEEEccCCC--EEEEEeeCCeEEEE
Q 032092 32 QMRCVAAFPDQQ--GFWVGSIEGRVGVH 57 (147)
Q Consensus 32 ~i~~la~spdg~--~l~~g~~dg~i~i~ 57 (147)
..++|+..+.++ .+-.|+.+|+|.-.
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV 428 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKI 428 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEE
Confidence 356677666443 45678888988653
No 359
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=26.25 E-value=2.6e+02 Score=22.68 Aligned_cols=55 Identities=20% Similarity=0.237 Sum_probs=31.3
Q ss_pred eecCCeEEEEECCCCccceeEecCCC-----CcceEEEEEccCCCEEEEEeeCCeEEEEeecCCCC
Q 032092 4 GTADRNLVVFNLQNPQTEFKRINSPL-----KYQMRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQQ 64 (147)
Q Consensus 4 gs~dg~v~iwdi~~~~~~~~~~~~~~-----~~~i~~la~spdg~~l~~g~~dg~i~i~~~d~~~~ 64 (147)
|+. +-+..||..+.+ +..+..+. ...|.+|...+++..|.+|+..| +.. +|..++
T Consensus 162 gt~-~Gl~~~~~~~~~--~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~G-l~~--~~~~~~ 221 (758)
T 3ott_A 162 GTY-NGLCRYIPSNGK--FEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGY-LFQ--YFPSTG 221 (758)
T ss_dssp EET-TEEEEEETTTTE--EEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEE-EEE--EETTTT
T ss_pred EeC-CCHhhCccCCCc--eEEecCCCccccccceeEEEEEECCCCEEEEEECCC-CeE--EcCCCC
Confidence 444 347778877653 22221111 12378888877777767777544 544 676544
No 360
>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1
Probab=26.10 E-value=1.3e+02 Score=20.26 Aligned_cols=29 Identities=10% Similarity=0.038 Sum_probs=21.7
Q ss_pred eEEEEEccCCCEEEEEeeCCeEEEEeecCCC
Q 032092 33 MRCVAAFPDQQGFWVGSIEGRVGVHHLDDSQ 63 (147)
Q Consensus 33 i~~la~spdg~~l~~g~~dg~i~i~~~d~~~ 63 (147)
+.-+.|.|++...|.+...| ..-++|+..
T Consensus 112 lEp~eF~p~~~w~a~~~esG--~f~dvDLse 140 (164)
T 1zso_A 112 IELIDFFPSNNFIVEDTKGK--LYYDVNLSD 140 (164)
T ss_dssp EEEEEECCCSCEEEEETTSC--EEEEECCTT
T ss_pred eeeEEEecCCcEEEEECCCC--cEEeeecCC
Confidence 45688999999999987777 333577764
No 361
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=25.87 E-value=84 Score=26.44 Aligned_cols=31 Identities=6% Similarity=-0.012 Sum_probs=24.1
Q ss_pred ccCCCEEEEEeeCCeEEEEeecCCCCcceeEEE
Q 032092 39 FPDQQGFWVGSIEGRVGVHHLDDSQQSKNFTFK 71 (147)
Q Consensus 39 spdg~~l~~g~~dg~i~i~~~d~~~~~~~~~~~ 71 (147)
.++..++++-+.|.++|+ |+.++++.+.+..
T Consensus 228 ~~~~~fLftL~~Dh~LRi--WsL~t~~lv~t~D 258 (729)
T 3f7f_A 228 LFHERYLIVLTQNCHLKI--WDLTSFTLIQDYD 258 (729)
T ss_dssp EETTTEEEEEETTCEEEE--EETTTTEEEEEEE
T ss_pred ccCCcEEEEEEcCCeEEE--EEcCCCceEEeec
Confidence 345779999999999999 7777777665543
No 362
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=24.98 E-value=1.6e+02 Score=23.99 Aligned_cols=38 Identities=13% Similarity=0.273 Sum_probs=23.6
Q ss_pred eEEEEECCCCccceeEecCCCCcceEEEEEccCCCEEEE
Q 032092 9 NLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQGFWV 47 (147)
Q Consensus 9 ~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~l~~ 47 (147)
.+.+.+..+++ .......+...++.-++|+||+++|.+
T Consensus 510 ~~~~~~~~~g~-~~rf~~~P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 510 QMLCADPATGE-IRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp EEEEECTTTCC-EEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred eEEEEeCCCCe-EEEEEeCCCCccCcCeeECCCCCEEEE
Confidence 35556666664 222233344467899999999887654
No 363
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=24.88 E-value=48 Score=21.73 Aligned_cols=17 Identities=24% Similarity=0.335 Sum_probs=14.8
Q ss_pred CcEEEeecCCceeeecC
Q 032092 131 GAFNFWDKDSKQRLKVF 147 (147)
Q Consensus 131 g~i~iWd~~~~~~~~~~ 147 (147)
-.|.|||..+|.++.||
T Consensus 42 EkV~IvNvnNG~RfeTY 58 (139)
T 2c45_A 42 EQVTIVDIDNGARLVTY 58 (139)
T ss_dssp CCEEEEETTTCCEEEEC
T ss_pred CEEEEEECCCCceEEEE
Confidence 47999999999998886
No 364
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=24.58 E-value=2.8e+02 Score=22.43 Aligned_cols=55 Identities=5% Similarity=0.009 Sum_probs=33.7
Q ss_pred ecCCeEEEEECCCCccceeEecCCCCcceEEEEEccCCCE-EEEEeeCCeEEEEeecCC
Q 032092 5 TADRNLVVFNLQNPQTEFKRINSPLKYQMRCVAAFPDQQG-FWVGSIEGRVGVHHLDDS 62 (147)
Q Consensus 5 s~dg~v~iwdi~~~~~~~~~~~~~~~~~i~~la~spdg~~-l~~g~~dg~i~i~~~d~~ 62 (147)
+....|+..|+.+.+.. ..+..+.-..+..|+|+|+.+. +.+-..+++|.. +++.
T Consensus 12 s~~~~I~~i~l~~~~~~-~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r--~~~~ 67 (628)
T 4a0p_A 12 SRRADIRRISLETNNNN-VAIPLTGVKEASALDFDVTDNRIYWTDISLKTISR--AFMN 67 (628)
T ss_dssp EETTEEEEEESSCTTCE-EECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEE--EETT
T ss_pred EeCCcEEEEECCCCCcc-eEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEE--EECC
Confidence 45678999999875421 1111111124679999997555 555556788877 5543
No 365
>2fbe_A Predicted: similar to RET finger protein-like 1; dimer, jellyroll beta-sandwich fold, unknown function; 2.52A {Homo sapiens} SCOP: b.29.1.22
Probab=24.35 E-value=41 Score=23.26 Aligned_cols=20 Identities=10% Similarity=0.207 Sum_probs=17.4
Q ss_pred CCCCcEEEeecCCceeeecC
Q 032092 128 GSDGAFNFWDKDSKQRLKVF 147 (147)
Q Consensus 128 ~~Dg~i~iWd~~~~~~~~~~ 147 (147)
...|+|-++|+.++..|++|
T Consensus 136 ye~G~lSFY~v~~~~~i~tF 155 (201)
T 2fbe_A 136 VGMRSIAFYNVSDGCHIYTF 155 (201)
T ss_dssp TTTTEEEEEETTTTEEEEEE
T ss_pred cCCCEEEEEeCCCCceeEEE
Confidence 34789999999999999987
No 366
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=23.24 E-value=40 Score=21.31 Aligned_cols=17 Identities=12% Similarity=0.313 Sum_probs=14.1
Q ss_pred CcEEEeecCCceeeecC
Q 032092 131 GAFNFWDKDSKQRLKVF 147 (147)
Q Consensus 131 g~i~iWd~~~~~~~~~~ 147 (147)
-.|.|||..+|.++.||
T Consensus 45 E~V~I~NvnNG~Rf~TY 61 (114)
T 3oug_A 45 EKVQVVNLNNGERLETY 61 (114)
T ss_dssp BEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCceEEEE
Confidence 36899999999888775
No 367
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=23.01 E-value=70 Score=25.02 Aligned_cols=27 Identities=19% Similarity=0.122 Sum_probs=21.3
Q ss_pred eEEEEEccCCC-EEEEEeeCCeEEEEeecC
Q 032092 33 MRCVAAFPDQQ-GFWVGSIEGRVGVHHLDD 61 (147)
Q Consensus 33 i~~la~spdg~-~l~~g~~dg~i~i~~~d~ 61 (147)
...|+|.|||+ .+.+....|.|++ ++.
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~--~~~ 43 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKI--LTP 43 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEE--ECT
T ss_pred ceEEEECCCCCeEEEEEeCCceEEE--EeC
Confidence 57999999996 5556677899998 654
No 368
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=22.79 E-value=1.6e+02 Score=24.52 Aligned_cols=55 Identities=20% Similarity=0.163 Sum_probs=35.1
Q ss_pred eEeecCCeEEEEECCCCc---cceeEec-CCCCcce-EEEEEccCCCEEEEEeeCCeEEE
Q 032092 2 VVGTADRNLVVFNLQNPQ---TEFKRIN-SPLKYQM-RCVAAFPDQQGFWVGSIEGRVGV 56 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~---~~~~~~~-~~~~~~i-~~la~spdg~~l~~g~~dg~i~i 56 (147)
..|+++|.|.-.-+.... .....+. .+...+| +.|.++++...|.+++..+-++|
T Consensus 416 FLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 416 FVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp EEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 568899988755444321 1122221 1123466 79999999889999988877776
No 369
>2vok_A 52 kDa RO protein; polymorphism, immune system, metal-binding, tripartite motif (TRIM) protein, SPRY systemic lupus erythematosus, zinc, B30.2; 1.30A {Mus musculus} PDB: 2vol_B* 2iwg_B*
Probab=22.40 E-value=48 Score=22.65 Aligned_cols=20 Identities=15% Similarity=0.361 Sum_probs=17.2
Q ss_pred CCCCcEEEeecCCc-eeeecC
Q 032092 128 GSDGAFNFWDKDSK-QRLKVF 147 (147)
Q Consensus 128 ~~Dg~i~iWd~~~~-~~~~~~ 147 (147)
...|.|-++|+.++ ..|++|
T Consensus 134 ye~G~lSFY~v~~~~~~I~tF 154 (188)
T 2vok_A 134 YEAGVVSFYNITDHGSLIYTF 154 (188)
T ss_dssp TTTTEEEEEETTTTTEEEEEE
T ss_pred cCCCEEEEEECCCCCeeeEEe
Confidence 35789999999998 999987
No 370
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=20.38 E-value=2.6e+02 Score=20.50 Aligned_cols=50 Identities=10% Similarity=0.136 Sum_probs=24.6
Q ss_pred eEeecCCeEEEEECCCCccceeEec-CCCCcceEEEEEcc-CCCEEEEEeeCC
Q 032092 2 VVGTADRNLVVFNLQNPQTEFKRIN-SPLKYQMRCVAAFP-DQQGFWVGSIEG 52 (147)
Q Consensus 2 ~~gs~dg~v~iwdi~~~~~~~~~~~-~~~~~~i~~la~sp-dg~~l~~g~~dg 52 (147)
.+|+..| +.+++-..+........ ......|.+|++.| +.+.+.+++..|
T Consensus 26 ~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g 77 (394)
T 3b7f_A 26 LVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTG 77 (394)
T ss_dssp EEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC-
T ss_pred EEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCC
Confidence 4566655 55555432111232221 11224699999999 344455555555
No 371
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=20.34 E-value=3.5e+02 Score=22.03 Aligned_cols=33 Identities=12% Similarity=0.158 Sum_probs=23.3
Q ss_pred eceEEEEEecC-CCeEEEeCC--C-----CcEEEeecCCce
Q 032092 110 KSHVIVLFVQI-HHTFATAGS--D-----GAFNFWDKDSKQ 142 (147)
Q Consensus 110 ~~~~~~~fspd-g~~latg~~--D-----g~i~iWd~~~~~ 142 (147)
.+|..+++..+ +++++.||. + ..+.+||..+.+
T Consensus 539 ~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 539 LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 34555777776 678888876 2 358899988765
No 372
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=20.04 E-value=50 Score=21.75 Aligned_cols=17 Identities=18% Similarity=0.661 Sum_probs=14.3
Q ss_pred CcEEEeecCCceeeecC
Q 032092 131 GAFNFWDKDSKQRLKVF 147 (147)
Q Consensus 131 g~i~iWd~~~~~~~~~~ 147 (147)
-.|.|||..+|.++.||
T Consensus 59 EkV~IvNvnNG~RfeTY 75 (143)
T 1pqh_A 59 EAIDIWNVTNGKRFSTY 75 (143)
T ss_dssp CEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCceEEEE
Confidence 47899999999988876
Done!