Query 032096
Match_columns 147
No_of_seqs 24 out of 26
Neff 2.6
Searched_HMMs 13730
Date Mon Mar 25 15:20:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032096.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032096hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1acfa_ d.110.1.1 (A:) Profili 99.2 4.5E-12 3.3E-16 90.9 4.9 120 10-145 2-123 (125)
2 d1ypra_ d.110.1.1 (A:) Profili 99.2 4.1E-12 3E-16 91.1 3.9 121 10-145 2-123 (125)
3 d3nula_ d.110.1.1 (A:) Profili 99.0 1.9E-10 1.3E-14 83.5 6.3 124 9-147 1-130 (130)
4 d1d1ja_ d.110.1.1 (A:) Profili 98.6 2.1E-08 1.6E-12 73.2 5.3 130 9-146 2-138 (138)
5 d2pbdp1 d.110.1.1 (P:1-139) Pr 98.5 8.8E-08 6.4E-12 69.6 5.3 129 9-145 2-137 (139)
6 d2f76x1 a.61.1.3 (X:1-94) Maso 69.3 1.1 8.2E-05 30.2 2.1 28 40-67 13-40 (94)
7 d1gkya_ c.37.1.1 (A:) Guanylat 65.3 6 0.00043 26.8 5.3 63 17-84 6-80 (186)
8 d2od4a1 d.58.4.20 (A:1-100) Hy 47.5 12 0.00084 24.6 4.2 27 64-90 38-64 (100)
9 d1kgda_ c.37.1.1 (A:) Guanylat 45.1 15 0.0011 25.0 4.6 61 17-83 8-81 (178)
10 d1s96a_ c.37.1.1 (A:) Guanylat 38.6 19 0.0014 25.2 4.4 60 17-82 7-80 (205)
11 d1t0ha_ b.34.2.1 (A:) SH3-like 30.8 12 0.00088 24.8 2.1 47 29-100 26-72 (96)
12 d1xa6a1 a.116.1.1 (A:271-466) 30.1 8.1 0.00059 26.3 1.1 47 42-89 7-54 (196)
13 d1kjwa1 b.34.2.1 (A:430-525) P 27.4 25 0.0018 21.8 3.1 27 82-108 32-59 (96)
14 d2i7na1 c.55.1.14 (A:236-381) 27.1 8 0.00059 27.2 0.6 25 51-75 75-99 (146)
15 d1lvga_ c.37.1.1 (A:) Guanylat 26.9 45 0.0033 22.2 4.6 43 36-83 36-78 (190)
16 d1t11a1 a.223.1.1 (A:248-376) 24.5 20 0.0014 23.0 2.2 26 41-66 103-128 (129)
17 d1mm2a_ g.50.1.2 (A:) Mi2-beta 22.6 9.3 0.00067 22.5 0.2 14 88-101 45-58 (61)
18 d2c35a1 a.60.8.2 (A:14-142) RN 22.1 17 0.0012 24.5 1.5 44 23-67 80-123 (129)
19 d1kmva_ c.71.1.1 (A:) Dihydrof 21.8 33 0.0024 23.7 3.1 67 18-93 60-144 (186)
20 d1w26a1 a.223.1.1 (A:248-432) 21.3 26 0.0019 23.6 2.4 29 41-69 103-131 (185)
21 d1giqa2 d.166.1.1 (A:210-413) 21.3 27 0.002 23.9 2.5 64 4-73 13-81 (204)
22 d1ex4a1 b.34.7.1 (A:223-270) D 20.5 16 0.0011 22.4 0.9 15 103-117 22-36 (48)
No 1
>d1acfa_ d.110.1.1 (A:) Profilin (actin-binding protein) {Acanthamoeba castellanii [TaxId: 5755]}
Probab=99.21 E-value=4.5e-12 Score=90.91 Aligned_cols=120 Identities=19% Similarity=0.339 Sum_probs=101.9
Q ss_pred HHHHhh-hccCCCChhhhhhhhhccCCCCCcchhhhHHhhhCcccccchhhHHHHHHhhCC-ceeeeEEecCceEEEEee
Q 032096 10 WEKWAS-TSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVKLNK-LQTDCFFIGKNQYIVTTI 87 (147)
Q Consensus 10 wEKwa~-~~VG~sgkplkaA~Lin~dptgpSRLl~~iaeQeG~~~~~~e~~~fiDfi~~nn-L~tE~f~Ig~nqYlVTsI 87 (147)
|+-|+. .+||+ +.++.|+++..|- ++-|.-+|..+.|.|++.|++.++... ++.+-++|++.||+++..
T Consensus 2 Wq~yvd~~L~~t--g~v~~aaI~g~DG-------~vwA~S~gf~~~~~E~~~i~~~f~d~~~~~~~Gi~i~G~KY~~~~~ 72 (125)
T d1acfa_ 2 WQTYVDTNLVGT--GAVTQAAILGLDG-------NTWATSAGFAVTPAQGTTLAGAFNNADAIRAGGFDLAGVHYVTLRA 72 (125)
T ss_dssp HHHHHHTTTGGG--TSCSEEEEEETTS-------CEEEECTTCCCCHHHHHHHHHHHHCCHHHHHHCEEETTEEEEEEEE
T ss_pred hHHHHHHHhccc--cCcceeEEEcCCC-------CEEEECCCCCCCHHHHHHHHHhccChhhhhhCCEEECCeEEEEEec
Confidence 899995 47774 4677788888873 256777999999999999999996543 667889999999999999
Q ss_pred ecceeeeecccccccCCcceEEEEehhhhhhhhccCCcchhhHHHHHHHHHHHHhhhh
Q 032096 88 HENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRR 145 (147)
Q Consensus 88 he~wf~ARcvNt~~p~GeG~IVmq~~ayiLValy~gSi~~as~am~~~dqf~~ql~r~ 145 (147)
.|+..++|+ ..+|++|+.|...|+|++|+.++- +.++-.+++.+++.|-..
T Consensus 73 d~~~i~~kk------~~~Gi~i~kT~~~iiig~y~e~~~-~~~~~~~v~~ladYL~~~ 123 (125)
T d1acfa_ 73 DDRSIYGKK------GSSGVITVKTSKAILVGVYNEKIQ-PGTAANVVEKLADYLIGQ 123 (125)
T ss_dssp SSSEEEEEE------TTEEEEEEECSSEEEEEEECTTSC-HHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEc------CCCCEEEEEcCCEEEEEECCCCCC-HHHHHHHHHHHHHHHHHc
Confidence 999999885 468999999999999999999985 578899999999998654
No 2
>d1ypra_ d.110.1.1 (A:) Profilin (actin-binding protein) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.19 E-value=4.1e-12 Score=91.12 Aligned_cols=121 Identities=20% Similarity=0.331 Sum_probs=103.0
Q ss_pred HHHHhhhccCCCChhhhhhhhhccCCCCCcchhhhHHhhhCcccccchhhHHHHHHhhCC-ceeeeEEecCceEEEEeee
Q 032096 10 WEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVKLNK-LQTDCFFIGKNQYIVTTIH 88 (147)
Q Consensus 10 wEKwa~~~VG~sgkplkaA~Lin~dptgpSRLl~~iaeQeG~~~~~~e~~~fiDfi~~nn-L~tE~f~Ig~nqYlVTsIh 88 (147)
|+-|+..++|. .-+..|+++..|.+ + +-|.-+|..+.|.|++.+++.++... ++.+-|+|++.||+++...
T Consensus 2 Wq~Yvd~L~~~--g~v~~aaI~g~dg~--s----vwA~S~gf~~~~~E~~~i~~~f~~~~~~~~~Gi~i~G~KY~~~~~d 73 (125)
T d1ypra_ 2 WQAYTDNLIGT--GKVDKAVIYSRAGD--A----VWATSGGLSLQPNEIGEIVQGFDNPAGLQSNGLHIQGQKFMLLRAD 73 (125)
T ss_dssp HHHHHHHHHHT--SSCSEEEEEETTSC--C----EEEEESCCCCCHHHHHHHHHHTTCTHHHHHHCEEETTEEEEEEEEC
T ss_pred HHHHHHhHhcC--CCcCeEEEEeCCCC--e----eEEECCCCCCCHHHHHHHHHHhcCcchhccCCEEEcCeEEEEEecC
Confidence 89999999974 46888999998873 2 45667899999999999999996543 6778899999999999999
Q ss_pred cceeeeecccccccCCcceEEEEehhhhhhhhccCCcchhhHHHHHHHHHHHHhhhh
Q 032096 89 ENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRR 145 (147)
Q Consensus 89 e~wf~ARcvNt~~p~GeG~IVmq~~ayiLValy~gSi~~as~am~~~dqf~~ql~r~ 145 (147)
|+..++|+-+ +|++++.|...|+|++|+.++- +.++-.+++++++.|-..
T Consensus 74 ~~~i~~kk~~------~Gi~i~kT~~~iiig~y~~~~~-~~~~~~~v~~ladYL~~~ 123 (125)
T d1ypra_ 74 DRSIYGRHDA------EGVVCVRTKQTVIIAHYPPTVQ-AGEATKIVEQLADYLIGV 123 (125)
T ss_dssp SSEEEEEETT------EEEEEEECSSEEEEEEECTTSC-HHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEeCC------CcEEEEECCCEEEEEEcCCCCC-HHHHHHHHHHHHHHHHHc
Confidence 9999988554 6999999999999999999985 577888999999988543
No 3
>d3nula_ d.110.1.1 (A:) Profilin (actin-binding protein) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.02 E-value=1.9e-10 Score=83.49 Aligned_cols=124 Identities=17% Similarity=0.288 Sum_probs=98.9
Q ss_pred HHHHHhhhcc---CCCChhhhhhhhhccCCCCCcchhhhHHhhhCc-ccccchhhHHHHHHhh-CCceeeeEEecCceEE
Q 032096 9 TWEKWASTSV---GSSGEPLKAALLINYDPTGPSRLLSTIAEREGM-KADPVDLTEFVDFVKL-NKLQTDCFFIGKNQYI 83 (147)
Q Consensus 9 ~wEKwa~~~V---G~sgkplkaA~Lin~dptgpSRLl~~iaeQeG~-~~~~~e~~~fiDfi~~-nnL~tE~f~Ig~nqYl 83 (147)
.|+-|+.++. ..+|+ +..|+++..|- ++-|.-+|. .++|.|++.|+++++. ..++.+=+++++.||+
T Consensus 1 SWq~Yvd~~l~~~~~tg~-v~~AAI~g~DG-------svWA~S~gf~~l~~~E~~~i~~~f~~~~~~~~~Gi~~~G~KY~ 72 (130)
T d3nula_ 1 SWQSYVDDHLMCDVEGNH-LTAAAILGQDG-------SVWAQSAKFPQLKPQEIDGIKKDFEEPGFLAPTGLFLGGEKYM 72 (130)
T ss_dssp CHHHHHHHTTSCCBTTBC-CSEEEEEETTS-------CEEEECTTCCCCCHHHHHHHHHHHHSTTSSTTTCEEETTEEEE
T ss_pred ChHHHHhhhheeecCCCe-EeEEEEEcCCC-------CeeeeCCCCCCCCHHHHHHHHHHhcCccccccCCeEECCeEEE
Confidence 3899998765 33555 67777788775 255666887 6899999999999976 4567778999999999
Q ss_pred EEeeecce-eeeecccccccCCcceEEEEehhhhhhhhccCCcchhhHHHHHHHHHHHHhhhhcC
Q 032096 84 VTTIHENW-FCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRRNL 147 (147)
Q Consensus 84 VTsIhe~w-f~ARcvNt~~p~GeG~IVmq~~ayiLValy~gSi~~as~am~~~dqf~~ql~r~~~ 147 (147)
+....|+. .++|.- .+|++|+.|...|+|++|+.++ .+.++-.+|+++++.|-..++
T Consensus 73 ~lr~d~~~~i~~kk~------~~Gi~i~KT~~~iIi~~y~~~~-~~g~~~~~ve~LadYL~~~g~ 130 (130)
T d3nula_ 73 VIQGEQGAVIRGKKG------PGGVTIKKTNQALVFGFYDEPM-TGGQCNLVVERLGDYLIESEL 130 (130)
T ss_dssp EEEEETTTEEEEEET------TEEEEEEECSSEEEEEEECTTS-CHHHHHHHHHHHHHHHHHTTC
T ss_pred EEecCCCcEEEEecC------CCeEEEEECCCEEEEEECCCCC-CHHHHHHHHHHHHHHHHHcCC
Confidence 99988764 565543 3599999999999999999987 477888999999999876653
No 4
>d1d1ja_ d.110.1.1 (A:) Profilin (actin-binding protein) {Human (Homo sapiens), isoform II [TaxId: 9606]}
Probab=98.60 E-value=2.1e-08 Score=73.17 Aligned_cols=130 Identities=15% Similarity=0.129 Sum_probs=100.4
Q ss_pred HHHHHhhhccCCCChhhhhhhhhccCCCCCcchhhhHHhhhCcccccchhhHHHHHHhh--CCceeeeEEecCceEEEEe
Q 032096 9 TWEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVKL--NKLQTDCFFIGKNQYIVTT 86 (147)
Q Consensus 9 ~wEKwa~~~VG~sgkplkaA~Lin~dptgpSRLl~~iaeQeG~~~~~~e~~~fiDfi~~--nnL~tE~f~Ig~nqYlVTs 86 (147)
.|+-|+..++| +| -+..|+++-.|. +|| +-|.-.|..+.+.|...+..++.+ ..|+.+=++|++.||++..
T Consensus 2 ~Wq~Yvd~L~~-~g-~v~~AAI~G~dg-~~s----vWA~S~gf~~~~~e~~ei~~~~~~d~~~~~~~Gi~l~G~Ky~~lr 74 (138)
T d1d1ja_ 2 GWQSYVDNLMC-DG-CCQEAAIVGYCD-AKY----VWAATAGGVFQSITPIEIDMIVGKDREGFFTNGLTLGAKKCSVIR 74 (138)
T ss_dssp CTHHHHHHHST-TS-CEEEEEEEECSS-SCS----EEEECTTSSGGGCCHHHHHHHHCSCSSHHHHHCEEETTEEEEEEE
T ss_pred chHHHHHhhcc-cc-ccceEEEEecCC-Cce----EEEECCCCCcCccCHHHHHHHhcCChhHHhhcCeEECCcEEEEEe
Confidence 48999999998 44 555566666654 122 446668999999999998887754 4688899999999999988
Q ss_pred ee-----cceeeeecccccccCCcceEEEEehhhhhhhhccCCcchhhHHHHHHHHHHHHhhhhc
Q 032096 87 IH-----ENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRRN 146 (147)
Q Consensus 87 Ih-----e~wf~ARcvNt~~p~GeG~IVmq~~ayiLValy~gSi~~as~am~~~dqf~~ql~r~~ 146 (147)
.. ++....|-.-.-+-.-+|++|+.|.-.|+|++|+-++-+ .++-.+|++++.-|-+.|
T Consensus 75 ~d~~~~~~~~~~~~~~~~gkk~~~Gv~i~kT~qaiiI~~y~~~~~~-g~~~~~Ve~LadYL~~~n 138 (138)
T d1d1ja_ 75 DSLYVDGDCTMDIRTKSQGGEPTYNVAVGRAGRALVIVMGKEGVHG-GTLNKKAYELALYLRRSD 138 (138)
T ss_dssp EESSSTTCCEEEEEECCSSSCCCCEEEEEECSSEEEEEEECTTCCH-HHHHHHHHHHHHHHHHTC
T ss_pred ccccccCcceeeecccccCCCCcceEEEEEcCCEEEEEEeCCCCCh-HHHHHHHHHHHHHHHhcC
Confidence 66 345555544444555579999999999999999998765 778899999999887654
No 5
>d2pbdp1 d.110.1.1 (P:1-139) Profilin (actin-binding protein) {Human (Homo sapiens), isoform I [TaxId: 9606]}
Probab=98.46 E-value=8.8e-08 Score=69.64 Aligned_cols=129 Identities=17% Similarity=0.179 Sum_probs=95.7
Q ss_pred HHHHHhhhccCCCChhhhhhhhhccCCCCCcchhhhHHhhhCcccccchhhHHHHHHh--hCCceeeeEEecCceEEEEe
Q 032096 9 TWEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVK--LNKLQTDCFFIGKNQYIVTT 86 (147)
Q Consensus 9 ~wEKwa~~~VG~sgkplkaA~Lin~dptgpSRLl~~iaeQeG~~~~~~e~~~fiDfi~--~nnL~tE~f~Ig~nqYlVTs 86 (147)
-|+.|+..++| +| -+..|+++-+|-. + ++-|.-.|..+.+.+...+..++. ...++.+=+.|++.||++..
T Consensus 2 ~Wq~Yvd~L~~-~g-~v~~AAIiG~~g~-~----svWA~s~g~~~~~~~~~ei~~~~~~d~~~~~~~Gi~l~G~Ky~~lr 74 (139)
T d2pbdp1 2 GWNAYIDNLMA-DG-TCQDAAIVGYKDS-P----SVWAAVPGKTFVNITPAEVGVLVGKDRSSFYVNGLTLGGQKCSVIR 74 (139)
T ss_dssp CSHHHHHHHHT-TS-CEEEEEEEESSSS-C----EEEEECTTSSGGGCCHHHHHHHHSSCCSTHHHHCEEETTEEEEEEE
T ss_pred chHHHHHHhhc-cC-CcceEEEEecCCC-c----eEEEECCCCCcCccCHHHHHHHHhcCchhhhhcCeEECCEEEEEEe
Confidence 38999988888 34 5777888888741 2 345666887777777777776664 46888999999999999987
Q ss_pred ee-----cceeeeecccccccCCcceEEEEehhhhhhhhccCCcchhhHHHHHHHHHHHHhhhh
Q 032096 87 IH-----ENWFCARCLNTVKAAGEGAIVMQTKAFLLVALYDGSIGPASRAMASADQLAWQLSRR 145 (147)
Q Consensus 87 Ih-----e~wf~ARcvNt~~p~GeG~IVmq~~ayiLValy~gSi~~as~am~~~dqf~~ql~r~ 145 (147)
.+ |+.-++|=..+..-.-.|++|+.|...|||++|+-++- +.++-.+|+++++.|-..
T Consensus 75 ~~~~~~~~~~i~~k~~~~g~~~~~gi~i~KT~qalii~~y~e~~~-~g~~~~~ve~LadYL~~~ 137 (139)
T d2pbdp1 75 DSLLQDGEFSMDLRTKSTGGAPTFNVTVTKTDKTLVLLMGKEGVH-GGLINKKCYEMASHLRRS 137 (139)
T ss_dssp EETTCTTTCEEEEEECCSTTCCCCEEEEEECSSEEEEEEECTTCC-HHHHHHHHHHHHHHHHHT
T ss_pred cccccCCCceEEEeecccCCCCcceEEEEEcCCEEEEEEcCCCCC-hHHHHHHHHHHHHHHHHc
Confidence 65 44445443333332334799999999999999999866 477888999999988543
No 6
>d2f76x1 a.61.1.3 (X:1-94) Mason-Pfizer monkey virus matrix protein {Simian Mason-Pfizer virus [TaxId: 11855]}
Probab=69.32 E-value=1.1 Score=30.24 Aligned_cols=28 Identities=36% Similarity=0.493 Sum_probs=25.4
Q ss_pred chhhhHHhhhCcccccchhhHHHHHHhh
Q 032096 40 RLLSTIAEREGMKADPVDLTEFVDFVKL 67 (147)
Q Consensus 40 RLl~~iaeQeG~~~~~~e~~~fiDfi~~ 67 (147)
+.|-.+++|.|++++..++.-|++||.+
T Consensus 13 ~~Lk~lLk~rGvkV~~~~L~~f~~~I~~ 40 (94)
T d2f76x1 13 EQLKQALKTRGVKVKYADLLKFFDFVKD 40 (94)
T ss_dssp HHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCeecCHHHHHHHHHHHHH
Confidence 3677889999999999999999999976
No 7
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=65.27 E-value=6 Score=26.75 Aligned_cols=63 Identities=25% Similarity=0.280 Sum_probs=45.3
Q ss_pred ccCCC--ChhhhhhhhhccCC----------CCCcchhhhHHhhhCcccccchhhHHHHHHhhCCceeeeEEecCceEEE
Q 032096 17 SVGSS--GEPLKAALLINYDP----------TGPSRLLSTIAEREGMKADPVDLTEFVDFVKLNKLQTDCFFIGKNQYIV 84 (147)
Q Consensus 17 ~VG~s--gkplkaA~Lin~dp----------tgpSRLl~~iaeQeG~~~~~~e~~~fiDfi~~nnL~tE~f~Ig~nqYlV 84 (147)
.+|.| ||=-=+-.|++..| |.|.|- -|..|....++.-..|-+.+++|.+ .|.-.+.++.|-+
T Consensus 6 l~GpsG~GK~tl~~~L~~~~~~~~~~~~~~TTR~~r~----~E~~g~dy~fvs~~~f~~~~~~g~f-~e~~~~~g~~Yg~ 80 (186)
T d1gkya_ 6 ISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRA----GEVNGKDYNFVSVDEFKSMIKNNEF-IEWAQFSGNYYGS 80 (186)
T ss_dssp EECCTTSSHHHHHHHHHHHCTTTEEECCEEECSCCCT----TCCBTTTEEECCHHHHHHHHHTTCE-EEEEEETTEEEEE
T ss_pred EECCCCCCHHHHHHHHHHhCCcceeEEEeeccCCCCC----CCcCCccceeccHHHHHHHHhcccc-eeeeEEccceeec
Confidence 46777 45444444555555 445544 3888999999999999999999998 6777777777643
No 8
>d2od4a1 d.58.4.20 (A:1-100) Hypothetical protein GOS_3280838 {environmental samples}
Probab=47.54 E-value=12 Score=24.64 Aligned_cols=27 Identities=7% Similarity=0.096 Sum_probs=24.1
Q ss_pred HHhhCCceeeeEEecCceEEEEeeecc
Q 032096 64 FVKLNKLQTDCFFIGKNQYIVTTIHEN 90 (147)
Q Consensus 64 fi~~nnL~tE~f~Ig~nqYlVTsIhe~ 90 (147)
.++.|-|+.|.|.|+.|+.++.++-++
T Consensus 38 ~~~~G~l~~~~~~iSen~~~~I~~fpd 64 (100)
T d2od4a1 38 VISLGAISAEFVQSNENSGMYIIHYPD 64 (100)
T ss_dssp HHHHTCSEEEEEEEETTEEEEEEEESS
T ss_pred hhhCCCeEEEEEEecCCeEEEEEEeCC
Confidence 678999999999999999999988654
No 9
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.14 E-value=15 Score=25.02 Aligned_cols=61 Identities=21% Similarity=0.256 Sum_probs=42.0
Q ss_pred ccCCCC---hhhhhhhhhccCC----------CCCcchhhhHHhhhCcccccchhhHHHHHHhhCCceeeeEEecCceEE
Q 032096 17 SVGSSG---EPLKAALLINYDP----------TGPSRLLSTIAEREGMKADPVDLTEFVDFVKLNKLQTDCFFIGKNQYI 83 (147)
Q Consensus 17 ~VG~sg---kplkaA~Lin~dp----------tgpSRLl~~iaeQeG~~~~~~e~~~fiDfi~~nnL~tE~f~Ig~nqYl 83 (147)
.+|.|| .-|... |+-..| |.|.| --|.+|....++.-..|-+.+++|.+ .|+-.+.++.|=
T Consensus 8 l~Gpsg~GK~tl~~~-L~~~~~~~~~~~v~~TTR~~R----~~E~~G~dY~Fvs~~~F~~~~~~g~f-ie~~~~~g~~YG 81 (178)
T d1kgda_ 8 LLGAHGVGRRHIKNT-LITKHPDRFAYPIPHTTRPPK----KDEENGKNYYFVSHDQMMQDISNNEY-LEYGSHEDAMYG 81 (178)
T ss_dssp EECCTTSSHHHHHHH-HHHHCTTTEECCCCEECSCC-------CCBTTTBEECCHHHHHHHHHTTCE-EEEEEETTEEEE
T ss_pred EECCCCCCHHHHHHH-HHHhCCcCeeeccccccCCCC----CccccCccceeeehhhhhhheecCce-EEEeeeccccee
Confidence 478875 444444 443333 56665 35888999999999999999999988 777666666663
No 10
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=38.60 E-value=19 Score=25.19 Aligned_cols=60 Identities=23% Similarity=0.263 Sum_probs=40.5
Q ss_pred ccCCCC--h-hhhhhhhhccCC-----------CCCcchhhhHHhhhCcccccchhhHHHHHHhhCCceeeeEEecCceE
Q 032096 17 SVGSSG--E-PLKAALLINYDP-----------TGPSRLLSTIAEREGMKADPVDLTEFVDFVKLNKLQTDCFFIGKNQY 82 (147)
Q Consensus 17 ~VG~sg--k-plkaA~Lin~dp-----------tgpSRLl~~iaeQeG~~~~~~e~~~fiDfi~~nnL~tE~f~Ig~nqY 82 (147)
.+|.|| | -|+. .|+..+| |+|.| --|..|....++.-..|-+.+++|.+= |+-.+.+|.|
T Consensus 7 i~GPSG~GK~tl~~-~L~~~~p~~~~~~~is~TTR~~R----~~E~~G~dY~Fvs~~~F~~~i~~g~fl-E~~~~~g~~Y 80 (205)
T d1s96a_ 7 VSAPSGAGKSSLIQ-ALLKTQPLYDTQVSVSHTTRQPR----PGEVHGEHYFFVNHDEFKEMISRDAFL-EHAEVFGNYY 80 (205)
T ss_dssp EECCTTSCHHHHHH-HHHHHSCTTTEEECCCEECSCCC----TTCCBTTTBEECCHHHHHHHHHTTCEE-EEEEETTEEE
T ss_pred EECCCCCCHHHHHH-HHHhhCCccCceEEEEEeccCCC----ccccccccceeecHHHHHHHhhhhhhe-eEEEECCcee
Confidence 467774 3 4444 3444444 44554 468889999999999999999999863 5554544444
No 11
>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=30.84 E-value=12 Score=24.78 Aligned_cols=47 Identities=9% Similarity=0.285 Sum_probs=32.6
Q ss_pred hhhccCCCCCcchhhhHHhhhCcccccchhhHHHHHHhhCCceeeeEEecCceEEEEeeecceeeeeccccc
Q 032096 29 LLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVKLNKLQTDCFFIGKNQYIVTTIHENWFCARCLNTV 100 (147)
Q Consensus 29 ~Lin~dptgpSRLl~~iaeQeG~~~~~~e~~~fiDfi~~nnL~tE~f~Ig~nqYlVTsIhe~wf~ARcvNt~ 100 (147)
+|.+|||+-+.. .|. ...|+.|+.-|++. ++....|+||-+|+++++
T Consensus 26 AlydY~~~~dd~-~P~--~~~~LsF~~GDii~----------------------v~~~~d~~WW~gr~~~~~ 72 (96)
T d1t0ha_ 26 TNVRYSAAQEDD-VPV--PGMAISFEAKDFLH----------------------VKEKFNNDWWIGRLVKEG 72 (96)
T ss_dssp ESSCBCCCGGGC-CSS--TTCBCCBCTTCEEE----------------------EEEECSSSEEEEEESSTT
T ss_pred EeeccCCCCCCC-Ccc--ccccccCCCCCEEE----------------------EeeeeCCCceEEEEcCCC
Confidence 688999965542 222 34467777776654 367778999999999764
No 12
>d1xa6a1 a.116.1.1 (A:271-466) Beta-chimaerin, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.05 E-value=8.1 Score=26.35 Aligned_cols=47 Identities=9% Similarity=0.198 Sum_probs=35.1
Q ss_pred hhhHHhhhCcccccchhhHHHHHHhhCCceee-eEEecCceEEEEeeec
Q 032096 42 LSTIAEREGMKADPVDLTEFVDFVKLNKLQTD-CFFIGKNQYIVTTIHE 89 (147)
Q Consensus 42 l~~iaeQeG~~~~~~e~~~fiDfi~~nnL~tE-~f~Ig~nqYlVTsIhe 89 (147)
|..+.+.++..+ |.=+...++++.++.|++| .|-+.|++.-|..+.+
T Consensus 7 L~~~~~~~~~~i-P~iv~~~i~~l~~~gl~~eGiFR~~g~~~~v~~l~~ 54 (196)
T d1xa6a1 7 LTTLVKAHNTQR-PMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKM 54 (196)
T ss_dssp HHHHHHHHTCSS-CHHHHHHHHHHHHSCSSSTTTTTSCCCHHHHHHHHH
T ss_pred HHHHHHhcCCCC-ChHHHHHHHHHHHhCCCCCCeeeeCCCHHHHHHHHH
Confidence 344556666554 8888899999999989998 7888888876655544
No 13
>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=27.41 E-value=25 Score=21.76 Aligned_cols=27 Identities=22% Similarity=0.412 Sum_probs=18.1
Q ss_pred EEEEeeecceeeeecccccccCC-cceE
Q 032096 82 YIVTTIHENWFCARCLNTVKAAG-EGAI 108 (147)
Q Consensus 82 YlVTsIhe~wf~ARcvNt~~p~G-eG~I 108 (147)
+++-..+++||-+|-+......| .|.|
T Consensus 32 ~V~~~~d~~WW~~~~~~~~~~~g~~G~~ 59 (96)
T d1kjwa1 32 HVIDAGDEEWWQARRVHSDSETDDIGFI 59 (96)
T ss_dssp EEEECCSSSEEEEEECCSSCCCSCCEEE
T ss_pred EEeeeccCceEEEEEccCCCCCCCEeEE
Confidence 35566889999999765544444 3665
No 14
>d2i7na1 c.55.1.14 (A:236-381) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.06 E-value=8 Score=27.19 Aligned_cols=25 Identities=4% Similarity=0.130 Sum_probs=11.6
Q ss_pred cccccchhhHHHHHHhhCCceeeeE
Q 032096 51 MKADPVDLTEFVDFVKLNKLQTDCF 75 (147)
Q Consensus 51 ~~~~~~e~~~fiDfi~~nnL~tE~f 75 (147)
+++.-..+..++|||++++++.+.-
T Consensus 75 ~kFeT~~i~~~l~fi~~~~~~~~~~ 99 (146)
T d2i7na1 75 IRFPSCAMHRFIQMGSEKNFSSLHT 99 (146)
T ss_dssp EEEEGGGHHHHHHHC----------
T ss_pred EEeehhhHHHHHHHHHhcCCCCCCc
Confidence 4455578889999999999987643
No 15
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.91 E-value=45 Score=22.24 Aligned_cols=43 Identities=16% Similarity=0.054 Sum_probs=32.8
Q ss_pred CCCcchhhhHHhhhCcccccchhhHHHHHHhhCCceeeeEEecCceEE
Q 032096 36 TGPSRLLSTIAEREGMKADPVDLTEFVDFVKLNKLQTDCFFIGKNQYI 83 (147)
Q Consensus 36 tgpSRLl~~iaeQeG~~~~~~e~~~fiDfi~~nnL~tE~f~Ig~nqYl 83 (147)
|.|.|- -|+.|....++.-..|-+.++.|.+ .|...+.++.|-
T Consensus 36 TR~~r~----~E~~g~dy~fvs~~~f~~~~~~g~~-~e~~~~~~~~Yg 78 (190)
T d1lvga_ 36 TRNPRP----GEEDGKDYYFVTREMMQRDIAAGDF-IEHAEFSGNLYG 78 (190)
T ss_dssp CSCCCT----TCCBTTTBEECCHHHHHHHHHHTCE-EEEEEETTEEEE
T ss_pred ccCCCC----CCccCceeEEeehhHHHHHhhhhhh-eeeeEEcCccee
Confidence 345554 4889999999999999999999987 566666666664
No 16
>d1t11a1 a.223.1.1 (A:248-376) Trigger factor, C-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=24.47 E-value=20 Score=22.96 Aligned_cols=26 Identities=19% Similarity=0.333 Sum_probs=22.4
Q ss_pred hhhhHHhhhCcccccchhhHHHHHHh
Q 032096 41 LLSTIAEREGMKADPVDLTEFVDFVK 66 (147)
Q Consensus 41 Ll~~iaeQeG~~~~~~e~~~fiDfi~ 66 (147)
++.-|+++|+|.+.+.|+...++-+.
T Consensus 103 il~~Ia~~e~i~vs~eei~~~i~~~A 128 (129)
T d1t11a1 103 LLGEVIRTHELKADEEKVKALITEMA 128 (129)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHc
Confidence 56789999999999999999988653
No 17
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.60 E-value=9.3 Score=22.52 Aligned_cols=14 Identities=29% Similarity=0.964 Sum_probs=11.1
Q ss_pred ecceeeeecccccc
Q 032096 88 HENWFCARCLNTVK 101 (147)
Q Consensus 88 he~wf~ARcvNt~~ 101 (147)
.+.|||.+|.+...
T Consensus 45 ~~~W~C~~C~~~~~ 58 (61)
T d1mm2a_ 45 NGEWLCPRCTCPAL 58 (61)
T ss_dssp SSCCCCTTTTTTCC
T ss_pred CCcEECCCCcCccc
Confidence 46899999987654
No 18
>d2c35a1 a.60.8.2 (A:14-142) RNA polymerase II subunit RBP4 (RpoF) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.06 E-value=17 Score=24.48 Aligned_cols=44 Identities=16% Similarity=0.173 Sum_probs=35.4
Q ss_pred hhhhhhhhhccCCCCCcchhhhHHhhhCcccccchhhHHHHHHhh
Q 032096 23 EPLKAALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVKL 67 (147)
Q Consensus 23 kplkaA~Lin~dptgpSRLl~~iaeQeG~~~~~~e~~~fiDfi~~ 67 (147)
.+--++-|+|--|+.+.-+..+|.+- +-++...+++.++|-|++
T Consensus 80 ~~~E~~~i~Nl~P~~~~El~~li~~l-~~r~see~l~~iLd~l~~ 123 (129)
T d2c35a1 80 HKFELACLANLCPETAEESKALIPSL-EGRFEDEELQQILDDIQT 123 (129)
T ss_dssp CHHHHHHHHHHCCSSHHHHHHHCGGG-TTTSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHhCCCCCCHHHHHHHHHHh-ccCCCHHHHHHHHHHHHH
Confidence 44557789999999999888766554 457899999999999875
No 19
>d1kmva_ c.71.1.1 (A:) Dihydrofolate reductases, eukaryotic type {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.76 E-value=33 Score=23.73 Aligned_cols=67 Identities=18% Similarity=0.346 Sum_probs=36.8
Q ss_pred cCCCChhhhh--hhhhccCCCCCcchhhhHHhhhCcccccchhhHHHHHHhhCCc---eeeeEEecCce-----------
Q 032096 18 VGSSGEPLKA--ALLINYDPTGPSRLLSTIAEREGMKADPVDLTEFVDFVKLNKL---QTDCFFIGKNQ----------- 81 (147)
Q Consensus 18 VG~sgkplka--A~Lin~dptgpSRLl~~iaeQeG~~~~~~e~~~fiDfi~~nnL---~tE~f~Ig~nq----------- 81 (147)
+..+++||.. .+.++.+++-+. ++-......+.+.++..+.... .-|.|.|||.+
T Consensus 60 lp~~~~pLp~R~niVlSr~~~~~~---------~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~IiGG~~iY~~~L~~~~~ 130 (186)
T d1kmva_ 60 IPEKNRPLKGRINLVLSRELKEPP---------QGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGH 130 (186)
T ss_dssp SCGGGCSCTTSEEEEECSSCSSCC---------TTCSEEESSHHHHHHHHTSTTTTTTEEEEEECCCHHHHHHHHTSCSC
T ss_pred ccccCcccCCceEEEEeccccccc---------ccceeeccCHHHHHHHhhhHhhccCCCeEEEEccHHHHHHHHhcCcc
Confidence 3333566654 455565553322 2222233455666666654332 24689998854
Q ss_pred --EEEEeeecceee
Q 032096 82 --YIVTTIHENWFC 93 (147)
Q Consensus 82 --YlVTsIhe~wf~ 93 (147)
-.+|.||.+.=|
T Consensus 131 ~~i~lT~I~~~~~~ 144 (186)
T d1kmva_ 131 LKLFVTRIMQDFES 144 (186)
T ss_dssp EEEEEEEESSCCCC
T ss_pred cEEEEEEEcceeCC
Confidence 257888877555
No 20
>d1w26a1 a.223.1.1 (A:248-432) Trigger factor, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=21.26 E-value=26 Score=23.61 Aligned_cols=29 Identities=17% Similarity=0.266 Sum_probs=25.1
Q ss_pred hhhhHHhhhCcccccchhhHHHHHHhhCC
Q 032096 41 LLSTIAEREGMKADPVDLTEFVDFVKLNK 69 (147)
Q Consensus 41 Ll~~iaeQeG~~~~~~e~~~fiDfi~~nn 69 (147)
++.-|+++|+|.+...|+...++-+....
T Consensus 103 il~~Ia~~e~i~vt~eei~~~i~~~a~~~ 131 (185)
T d1w26a1 103 LLGEVIRTNELKADEERVKGLIEEMASAY 131 (185)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHccCCCCHHHHHHHHHHhhhcc
Confidence 56779999999999999999999886653
No 21
>d1giqa2 d.166.1.1 (A:210-413) Enzymatic component (Ia) of iota-toxin {Clostridium perfringens [TaxId: 1502]}
Probab=21.25 E-value=27 Score=23.90 Aligned_cols=64 Identities=14% Similarity=0.264 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhhhccCCCChhhhhhhhhccCCCCCcchhhhHH-hhhCcccccchhhHHHHHH----hhCCceee
Q 032096 4 SFVHKTWEKWASTSVGSSGEPLKAALLINYDPTGPSRLLSTIA-EREGMKADPVDLTEFVDFV----KLNKLQTD 73 (147)
Q Consensus 4 ~~~~r~wEKwa~~~VG~sgkplkaA~Lin~dptgpSRLl~~ia-eQeG~~~~~~e~~~fiDfi----~~nnL~tE 73 (147)
.|..+.+++|..++ . +-..++|-+|.-++= +.+|..+ .+.+......++++.|+.+ ++..++..
T Consensus 13 ~wg~~~~~~w~~~L-t----~~E~~ai~~Yt~~~Y-~~iN~~Lr~~~~~~~~~~~~~~~i~~Ld~al~k~~~~~~ 81 (204)
T d1giqa2 13 LWGKENYSDWSNKL-T----PNELADVNDYMRGGY-TAINNYLISNGPLNNPNPELDSKVNNIENALKLTPIPSN 81 (204)
T ss_dssp HHHHHHHTTTGGGS-C----HHHHHHHHHHHTTTH-HHHHHHHHTTGGGTSCCHHHHHHHHHHHHHHTTSCCSSC
T ss_pred HHHHHHHHHHHhcC-C----HHHHHHHHHHHHhHH-HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhCCCCCC
Confidence 35567889998752 2 345555667754332 4454444 4555555556666555544 45555443
No 22
>d1ex4a1 b.34.7.1 (A:223-270) DNA-binding domain of retroviral integrase {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=20.47 E-value=16 Score=22.39 Aligned_cols=15 Identities=40% Similarity=0.636 Sum_probs=11.4
Q ss_pred CCcceEEEEehhhhh
Q 032096 103 AGEGAIVMQTKAFLL 117 (147)
Q Consensus 103 ~GeG~IVmq~~ayiL 117 (147)
-|||+.|+|..--|.
T Consensus 22 KGeGAVVi~~~~~i~ 36 (48)
T d1ex4a1 22 KGEGAVVIQDNSDIK 36 (48)
T ss_dssp ECSSEEEEECSSCEE
T ss_pred cccceEEEecCCEEE
Confidence 499999999765443
Done!