Citrus Sinensis ID: 032098

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------
Protein Sequence
MASNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRHYA
Secondary Structure (PSIPRED)
ccccccccEEEEEEccccccEEEcccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHcccEEEEEEEccHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccEEEEEEEEEccccccEEEccccccccccccccccccccHccHHHccccccccEEccccccccccccccccccccccEEEEEcccHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHHHccccEEEcccccHHHHHccc
Coil and Loop (DISEMBL)
masnaaincsiidfssknhqliftslpiphcrygsstvrfRRNCFSlrasksyhspiiradssssssssssvkrepmlppynvlitgsTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRHYA
Flexible Loop (DISEMBL)
MASNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLrasksyhspiiradssssssssssvkrepmlppyNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRHYA
Low Complexity Region (SEG)
MASNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADssssssssssVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRHYA
Disordered region (IsUnstruct)
*****AINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRA******************************PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHS********
Disordered Region (DISOPRED)
******I*CSIIDFSSKNHQLIFTSLPI***************CFSLRASK******************************NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALS*HY*
Disordered Region (DISEMBL)
MASNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYHSPI******************PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRHYA
Disordered Region (DISPRO)
**SNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYHSPIIRA*****************LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRHYA
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRHYA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	147	2.2.26 [Sep-21-2011]
Q8LEU3	348	Chlorophyll(ide) b reduct	yes	no	0.721	0.304	0.565	7e-25
Q84ST4	343	Chlorophyll(ide) b reduct	yes	no	0.496	0.212	0.697	1e-23
Q93ZA0	496	Probable chlorophyll(ide)	no	no	0.340	0.100	0.568	7e-08
Q5N800	504	Probable chlorophyll(ide)	no	no	0.340	0.099	0.549	2e-07
P39577	252	Uncharacterized oxidoredu	yes	no	0.278	0.162	0.571	6e-05
Q5RCF8	278	Dehydrogenase/reductase S	no	no	0.455	0.241	0.391	0.0002
Q13268	258	Dehydrogenase/reductase S	yes	no	0.401	0.228	0.383	0.0003
Q9BTZ2	278	Dehydrogenase/reductase S	no	no	0.455	0.241	0.391	0.0003
P07914	249	Bile acid 7-dehydroxylase	N/A	no	0.340	0.200	0.431	0.0003
O74628	292	Uncharacterized oxidoredu	yes	no	0.210	0.106	0.677	0.0003

>sp|Q8LEU3|NOL_ARATH Chlorophyll(ide) b reductase NOL, chloroplastic OS=Arabidopsis thaliana GN=NOL PE=2 SV=1

 Score =  112 bits (280), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 65/115 (56%), Positives = 75/115 (65%), Gaps = 9/115 (7%)

Query: 24  TSLPI--PHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPY 81
           T LP   P CR      R     F L         +    SS++  +  S KREPM PPY
Sbjct: 26  TKLPFLSPICRR-----RLLAERFGLATVVVTRQNLTVTPSSAAVEARISGKREPMTPPY 80

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVT 135
           N+LITGSTKGIGYALA+EFLKAGDNV+ICSRS ERV++AVQSL+EEFGE HV  T
Sbjct: 81  NILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE-HVWGT 134

Required for chlorophyll b degradation. Chlorophyll b, chlorophyllide b, pheophorbide b and pheophytin b can be used as substrates.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 9EC: 4

>sp|Q84ST4|NOL_ORYSJ Chlorophyll(ide) b reductase NOL, chloroplastic OS=Oryza sativa subsp. japonica GN=NOL PE=1 SV=1

 Score =  108 bits (270), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/76 (69%), Positives = 62/76 (81%), Gaps = 3/76 (3%)

Query: 58  IRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERV 116
           IRA++       +  +R  M+PPYNVLITGSTKGIGYALAKEFLKAGDNV+ICSRS ERV
Sbjct: 53  IRAEAVPGGGGVA--RRAAMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERV 110

Query: 117 DSAVQSLREEFGEQHV 132
           +SAV  L++EFGEQHV
Sbjct: 111 ESAVTDLKKEFGEQHV 126

Required for chlorophyll b degradation.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

>sp|Q93ZA0|NYC1_ARATH Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Arabidopsis thaliana GN=NYC1 PE=1 SV=1

 Score = 56.2 bits (134), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 1/51 (1%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SERVDSAVQSLREEFGE 129
           P NV+ITGST+G+G ALA+EFL +GD VI+ SR SE VD  V+ L +   E
Sbjct: 161 PRNVVITGSTRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKE 211

Involved in chlorophyll b degradation.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

>sp|Q5N800|NYC1_ORYSJ Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Oryza sativa subsp. japonica GN=NYC1 PE=1 SV=1

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 1/51 (1%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
           P NV+ITGST+G+G ALA+EFL +GD V+I SRS E V   +  L E   E
Sbjct: 170 PRNVVITGSTRGLGKALAREFLLSGDRVVIASRSPESVLQTINELEENIQE 220

Required for proper chloroplast degradation. Involved in chlorophyll b degradation.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

>sp|P39577|DLTE_BACSU Uncharacterized oxidoreductase DltE OS=Bacillus subtilis (strain 168) GN=dltE PE=3 SV=2

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 28/42 (66%), Gaps = 1/42 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSL 123
           VLITG + GIG  LAK  L+ G+ VIIC RSE R+  A Q L
Sbjct: 8   VLITGGSAGIGLELAKRLLELGNEVIICGRSEARLAEAKQQL 49

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q5RCF8|DHRS4_PONAB Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=3

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 2/69 (2%)

Query: 59  RADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSER-VD 117
           RA +S   +SS   +R+P L     L+T ST GIG+A+A+   + G +V++ SR ++ VD
Sbjct: 12  RAWNSVRMASSGMTRRDP-LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVD 70

Query: 118 SAVQSLREE 126
            AV +L+ E
Sbjct: 71  QAVATLQGE 79

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q13268|DHRS2_HUMAN Dehydrogenase/reductase SDR family member 2 OS=Homo sapiens GN=DHRS2 PE=1 SV=3

 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 1/60 (1%)

Query: 68  SSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSER-VDSAVQSLREE 126
           SS+ + R+ +L     ++TGST GIG+A+A+   + G +V+I SR ++ VD A+  L+ E
Sbjct: 2   SSTGIDRKGVLANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGE 61

Displays NADPH-dependent dicarbonyl reductase activity in vitro with 3,4-Hexanedione, 2,3-Heptanedione and 1-Phenyl-1,2-propanedione as substrates. No reductase activity is displayed in vitro with steroids, retinoids and sugars as substrates. May inhibit cell replication.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9BTZ2|DHRS4_HUMAN Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=3

 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 2/69 (2%)

Query: 59  RADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSER-VD 117
           RA +S   +SS   +R+P L     L+T ST GIG+A+A+   + G +V++ SR ++ VD
Sbjct: 12  RAWNSVRMASSGMTRRDP-LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVD 70

Query: 118 SAVQSLREE 126
            AV +L+ E
Sbjct: 71  QAVATLQGE 79

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|P07914|BAIA1_EUBSP Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (strain VPI 12708) GN=baiA1 PE=1 SV=3

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNV-IICSRSERVDSAVQSLREEFGEQHVC 133
           +ITG T+GIG+A AK F++ G  V I     E VD+A+  L+E + E+ V 
Sbjct: 10  IITGGTRGIGFAAAKLFIENGAKVSIFGETQEEVDTALAQLKELYPEEEVL 60

7-alpha-dehydroxylation of cholic acid and chenodeoxycholate, yielding deoxycholic acid and lithocholic acid, respectively. Highest affinity with taurochenodeoxycholic acid.

Eubacterium sp. (strain VPI 12708) (taxid: 29347)

EC: 1

EC: .

EC: 1

EC: 7

EC: .

EC: 9

EC: 9

EC: .

EC: 5

>sp|O74628|YQ53_SCHPO Uncharacterized oxidoreductase C162.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC162.03 PE=3 SV=1

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/31 (67%), Positives = 24/31 (77%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS 113
           VLITGS+KG+GYAL K  L  G NVI CSR+
Sbjct: 8   VLITGSSKGLGYALVKVGLAQGYNVIACSRA 38

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
255546781	325	short-chain dehydrogenase, putative [Ric	0.476	0.215	0.859	5e-26
224097534	370	predicted protein [Populus trichocarpa]	0.530	0.210	0.689	1e-24
356556680	349	PREDICTED: chlorophyll(ide) b reductase	0.578	0.243	0.673	5e-24
10178029	341	unnamed protein product [Arabidopsis tha	0.721	0.310	0.565	5e-23
18414726	348	chlorophyll(ide) b reductase NOL [Arabid	0.721	0.304	0.565	5e-23
449446317	352	PREDICTED: chlorophyll(ide) b reductase	0.428	0.178	0.796	4e-22
297806477	349	short-chain dehydrogenase/reductase fami	0.714	0.300	0.589	5e-22
357115706	554	PREDICTED: chlorophyll(ide) b reductase	0.537	0.142	0.65	5e-22
75298085	343	RecName: Full=Chlorophyll(ide) b reducta	0.496	0.212	0.697	8e-22
326519666	346	predicted protein [Hordeum vulgare subsp	0.428	0.182	0.765	3e-21

>gi|255546781|ref|XP_002514449.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223546445|gb|EEF47945.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 61/71 (85%), Positives = 65/71 (91%), Gaps = 1/71 (1%)

Query: 66  SSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLR 124
           S SSSSV REPM+ PYNVLITGSTKGIGYALAKEFLKAGDNV+ICSRS ERV+SAVQ+LR
Sbjct: 58  SQSSSSVNREPMVSPYNVLITGSTKGIGYALAKEFLKAGDNVMICSRSAERVESAVQNLR 117

Query: 125 EEFGEQHVCVT 135
           EEFGEQHV  T
Sbjct: 118 EEFGEQHVWGT 128

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224097534|ref|XP_002310976.1| predicted protein [Populus trichocarpa] gi|222850796|gb|EEE88343.1| predicted protein [Populus trichocarpa]

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/87 (68%), Positives = 71/87 (81%), Gaps = 9/87 (10%)

Query: 64  SSSSSSSSVKREPMLPPYNVLITGSTK--------GIGYALAKEFLKAGDNVIICSRS-E 114
           + +SSSS++ REPMLPP+N+LITGSTK        GIGYALAKEFLKAGDNVIICSRS E
Sbjct: 73  AQTSSSSALSREPMLPPFNILITGSTKELVDAFNPGIGYALAKEFLKAGDNVIICSRSAE 132

Query: 115 RVDSAVQSLREEFGEQHVCVTWQHSAA 141
           RV+SAVQSLREEFGEQ V ++  H++ 
Sbjct: 133 RVESAVQSLREEFGEQRVWLSILHTSG 159

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556680|ref|XP_003546651.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Glycine max]

 Score =  115 bits (289), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/95 (67%), Positives = 71/95 (74%), Gaps = 10/95 (10%)

Query: 43  NCFSLRAS-KSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFL 101
           N  S+ AS K+  SPI  A +S         K EPMLPP+NVLITGSTKGIGYALAKEFL
Sbjct: 49  NTLSVSASRKNSTSPIFLATASG--------KSEPMLPPFNVLITGSTKGIGYALAKEFL 100

Query: 102 KAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVT 135
           KAGDNV+ICSRS ERV +AVQ+LR EFGEQHV  T
Sbjct: 101 KAGDNVLICSRSDERVKTAVQNLRVEFGEQHVWGT 135

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10178029|dbj|BAB11512.1| unnamed protein product [Arabidopsis thaliana]

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 65/115 (56%), Positives = 75/115 (65%), Gaps = 9/115 (7%)

Query: 24  TSLPI--PHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPY 81
           T LP   P CR      R     F L         +    SS++  +  S KREPM PPY
Sbjct: 26  TKLPFLSPICRR-----RLLAERFGLATVVVTRQNLTVTPSSAAVEARISGKREPMTPPY 80

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVT 135
           N+LITGSTKGIGYALA+EFLKAGDNV+ICSRS ERV++AVQSL+EEFGE HV  T
Sbjct: 81  NILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE-HVWGT 134

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18414726|ref|NP_568145.1| chlorophyll(ide) b reductase NOL [Arabidopsis thaliana] gi|75301367|sp|Q8LEU3.1|NOL_ARATH RecName: Full=Chlorophyll(ide) b reductase NOL, chloroplastic; AltName: Full=Protein NON-YELLOW COLORING 1-LIKE; Short=AtNOL; Short=Protein NYC1-LIKE; AltName: Full=Short-chain dehydrogenase/reductase NOL; Flags: Precursor gi|21553369|gb|AAM62462.1| unknown [Arabidopsis thaliana] gi|94442407|gb|ABF18991.1| At5g04900 [Arabidopsis thaliana] gi|134254417|dbj|BAF49742.1| short-chain dehydrogenase/reductase AtNOL1 [Arabidopsis thaliana] gi|332003419|gb|AED90802.1| chlorophyll(ide) b reductase NOL [Arabidopsis thaliana]

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 65/115 (56%), Positives = 75/115 (65%), Gaps = 9/115 (7%)

Query: 24  TSLPI--PHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPY 81
           T LP   P CR      R     F L         +    SS++  +  S KREPM PPY
Sbjct: 26  TKLPFLSPICRR-----RLLAERFGLATVVVTRQNLTVTPSSAAVEARISGKREPMTPPY 80

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVT 135
           N+LITGSTKGIGYALA+EFLKAGDNV+ICSRS ERV++AVQSL+EEFGE HV  T
Sbjct: 81  NILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE-HVWGT 134

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446317|ref|XP_004140918.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Cucumis sativus] gi|449494121|ref|XP_004159455.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Cucumis sativus]

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 51/64 (79%), Positives = 59/64 (92%), Gaps = 1/64 (1%)

Query: 73  KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQH 131
           ++EPM+PPYNVLITGSTKGIGYALA++FLK GDNV+ICSRS ERV+S+VQSLREEFGEQ 
Sbjct: 75  QKEPMVPPYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERVESSVQSLREEFGEQR 134

Query: 132 VCVT 135
           V  T
Sbjct: 135 VWGT 138

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806477|ref|XP_002871122.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297316959|gb|EFH47381.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/117 (58%), Positives = 78/117 (66%), Gaps = 12/117 (10%)

Query: 24  TSLPI--PHCRYGSSTVRFRRNCFSL-RASKSYHSPIIRADSSSSSSSSSSVKREPMLPP 80
           T LP   P CR    T RF      + R + S   P      S++  +  S KREPM PP
Sbjct: 26  TQLPFLSPLCRRRLLTERFGLATIVVTRQNLSVTPP------SAAMEARISGKREPMTPP 79

Query: 81  YNVLITGSTKG-IGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVT 135
           YNVLITGSTKG IGYALA+EFLKAGDNV+ICSRS ERV+SAVQSL+EEFGE HV  T
Sbjct: 80  YNVLITGSTKGFIGYALAREFLKAGDNVVICSRSAERVESAVQSLKEEFGE-HVWGT 135

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357115706|ref|XP_003559627.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Brachypodium distachyon]

 Score =  108 bits (271), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 52/80 (65%), Positives = 62/80 (77%), Gaps = 1/80 (1%)

Query: 54  HSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS 113
           H  + R  + + S      +R+PM+PPYNVLITGSTKGIGYALAK+FL AGDNVIICSRS
Sbjct: 46  HRELARIQAEAISGGGGVARRDPMVPPYNVLITGSTKGIGYALAKKFLMAGDNVIICSRS 105

Query: 114 -ERVDSAVQSLREEFGEQHV 132
            ERV+SA   L++EFGEQHV
Sbjct: 106 AERVESATNDLKKEFGEQHV 125

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|75298085|sp|Q84ST4.1|NOL_ORYSJ RecName: Full=Chlorophyll(ide) b reductase NOL, chloroplastic; AltName: Full=Protein NON-YELLOW COLORING 1-LIKE; Short=OsNOL; Short=Protein NYC1-LIKE; AltName: Full=Short-chain dehydrogenase/reductase NOL; Flags: Precursor gi|29244639|gb|AAO73232.1| putative oxidoreductase protein [Oryza sativa Japonica Group] gi|50582763|gb|AAT78833.1| putative short chain dehydrogenase (having alternative splicing products) [Oryza sativa Japonica Group] gi|134254415|dbj|BAF49741.1| short-chain dehydrogenase/reductase NOL1 [Oryza sativa Japonica Group] gi|218193420|gb|EEC75847.1| hypothetical protein OsI_12846 [Oryza sativa Indica Group] gi|222625482|gb|EEE59614.1| hypothetical protein OsJ_11943 [Oryza sativa Japonica Group]

 Score =  108 bits (270), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 53/76 (69%), Positives = 62/76 (81%), Gaps = 3/76 (3%)

Query: 58  IRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERV 116
           IRA++       +  +R  M+PPYNVLITGSTKGIGYALAKEFLKAGDNV+ICSRS ERV
Sbjct: 53  IRAEAVPGGGGVA--RRAAMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERV 110

Query: 117 DSAVQSLREEFGEQHV 132
           +SAV  L++EFGEQHV
Sbjct: 111 ESAVTDLKKEFGEQHV 126

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326519666|dbj|BAK00206.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/64 (76%), Positives = 56/64 (87%), Gaps = 1/64 (1%)

Query: 73  KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQH 131
           +REPM PPYNVLITGSTKGIGYALA++FLKAGDNV+ICSRS ERV+S    L++EFGEQH
Sbjct: 69  RREPMAPPYNVLITGSTKGIGYALARKFLKAGDNVVICSRSAERVESVANDLKKEFGEQH 128

Query: 132 VCVT 135
           V  T
Sbjct: 129 VWGT 132

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
TAIR|locus:2175254	348	NOL "NYC1-like" [Arabidopsis t	0.401	0.169	0.852	1.3e-22
UNIPROTKB|Q84ST4	343	NOL "Chlorophyll(ide) b reduct	0.408	0.174	0.819	9e-22
TAIR|locus:2119330	496	NYC1 "NON-YELLOW COLORING 1" [	0.340	0.100	0.568	3.4e-08
UNIPROTKB|Q5N800	504	NYC1 "Probable chlorophyll(ide	0.340	0.099	0.549	2e-07
WB|WBGene00000976	257	dhs-13 [Caenorhabditis elegans	0.326	0.186	0.530	3.1e-07
UNIPROTKB|F1PEY9	283	LOC490617 "Uncharacterized pro	0.292	0.151	0.477	6.4e-05
UNIPROTKB|J3QST2	140	DHRS4 "Dehydrogenase/reductase	0.360	0.378	0.381	8e-05
TIGR_CMR|SO_2397	275	SO_2397 "oxidoreductase, short	0.374	0.2	0.421	0.0002
UNIPROTKB|F5GWZ1	155	DHRS4 "Dehydrogenase/reductase	0.360	0.341	0.381	0.00021
POMBASE|SPCC162.03	292	SPCC162.03 "short chain dehydr	0.210	0.106	0.677	0.00022

TAIR|locus:2175254 NOL "NYC1-like" [Arabidopsis thaliana (taxid:3702)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 52/61 (85%), Positives = 58/61 (95%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQH 131
             KREPM PPYN+LITGSTKGIGYALA+EFLKAGDNV+ICSRS ERV++AVQSL+EEFGE H
Sbjct:    72 KREPMTPPYNILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE-H 130

Query:   132 V 132
             V
Sbjct:   131 V 131

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=TAS

GO:0015996 "chlorophyll catabolic process" evidence=IDA

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q84ST4 NOL "Chlorophyll(ide) b reductase NOL, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 50/61 (81%), Positives = 56/61 (91%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQH 131
             +R  M+PPYNVLITGSTKGIGYALAKEFLKAGDNV+ICSRS ERV+SAV  L++EFGEQH
Sbjct:    66 RRAAMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERVESAVTDLKKEFGEQH 125

Query:   132 V 132
             V
Sbjct:   126 V 126

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IDA

TAIR|locus:2119330 NYC1 "NON-YELLOW COLORING 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 3.4e-08, P = 3.4e-08
 Identities = 29/51 (56%), Positives = 37/51 (72%)

Query:    80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
             P NV+ITGST+G+G ALA+EFL +GD VI+ SRS E VD  V+ L +   E
Sbjct:   161 PRNVVITGSTRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKE 211

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IC

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=IMP

GO:0015996 "chlorophyll catabolic process" evidence=IMP

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q5N800 NYC1 "Probable chlorophyll(ide) b reductase NYC1, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 128 (50.1 bits), Expect = 2.0e-07, P = 2.0e-07
 Identities = 28/51 (54%), Positives = 35/51 (68%)

Query:    80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
             P NV+ITGST+G+G ALA+EFL +GD V+I SRS E V   +  L E   E
Sbjct:   170 PRNVVITGSTRGLGKALAREFLLSGDRVVIASRSPESVLQTINELEENIQE 220

GO:0009536 "plastid" evidence=IDA

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=IMP

GO:0015996 "chlorophyll catabolic process" evidence=IMP

GO:0016491 "oxidoreductase activity" evidence=IDA

GO:0042170 "plastid membrane" evidence=RCA

WB|WBGene00000976 dhs-13 [Caenorhabditis elegans (taxid:6239)]

 Score = 121 (47.7 bits), Expect = 3.1e-07, P = 3.1e-07
 Identities = 26/49 (53%), Positives = 35/49 (71%)

Query:    84 LITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQH 131
             L+T STKGIG+A+AK+   AG +V++CSR  E VD AV +LR E  + H
Sbjct:    15 LVTASTKGIGFAIAKQLGAAGASVVVCSRKKENVDEAVAALRLENIDAH 63

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008667 "2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity" evidence=IEA

GO:0009239 "enterobactin biosynthetic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|F1PEY9 LOC490617 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 101 (40.6 bits), Expect = 6.4e-05, P = 6.4e-05
 Identities = 21/44 (47%), Positives = 32/44 (72%)

Query:    84 LITGSTKGIGYALAKEFLKAGDNVIICSRSER-VDSAVQSLREE 126
             +ITGSTKGIG+A+A+   + G +V++ SR +  VD AV +L+ E
Sbjct:    42 VITGSTKGIGFAIARRLARDGAHVVVSSRKQHNVDRAVAALQGE 85

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|J3QST2 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Homo sapiens (taxid:9606)]

 Score = 96 (38.9 bits), Expect = 8.0e-05, P = 8.0e-05
 Identities = 21/55 (38%), Positives = 36/55 (65%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSER-VDSAVQSLREE 126
             +R+P+      L+T ST GIG+A+A+   + G +V++ SR ++ VD AV +L+ E
Sbjct:     8 RRDPLANKV-ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGE 61

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

TIGR_CMR|SO_2397 SO_2397 "oxidoreductase, short-chain dehydrogenase/reductase family" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 99 (39.9 bits), Expect = 0.00020, P = 0.00020
 Identities = 24/57 (42%), Positives = 36/57 (63%)

Query:    82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSLREEFGEQ-HVCVTW 136
             NV++ G T GI  A+A  F  AG NV + SRS+ +VD+AV  L++   E  H+ V++
Sbjct:    13 NVVVVGGTSGINLAIAIAFAHAGANVAVASRSQDKVDAAVLQLKQAHPEGIHLGVSF 69

GO:0008152 "metabolic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

UNIPROTKB|F5GWZ1 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Homo sapiens (taxid:9606)]

 Score = 96 (38.9 bits), Expect = 0.00021, P = 0.00021
 Identities = 21/55 (38%), Positives = 36/55 (65%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSER-VDSAVQSLREE 126
             +R+P+      L+T ST GIG+A+A+   + G +V++ SR ++ VD AV +L+ E
Sbjct:    26 RRDPLANKV-ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGE 79

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

POMBASE|SPCC162.03 SPCC162.03 "short chain dehydrogenase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 99 (39.9 bits), Expect = 0.00022, P = 0.00022
 Identities = 21/31 (67%), Positives = 24/31 (77%)

Query:    83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS 113
             VLITGS+KG+GYAL K  L  G NVI CSR+
Sbjct:     8 VLITGSSKGLGYALVKVGLAQGYNVIACSRA 38

GO:0005829 "cytosol" evidence=IDA

GO:0008150 "biological_process" evidence=ND

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.00080117	hypothetical protein (370 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.X.5768.1	chlorophyllase (EC-3.1.1.14) (304 aa)						•			0.899
	estExt_fgenesh4_pg.C_LG_VI0825	SubName- Full=Putative uncharacterized protein; (372 aa)						•			0.899
	estExt_Genewise1_v1.C_LG_XVI3731	chlorophyll synthetase (EC-2.5.1.62) (329 aa)						•			0.899
	estExt_Genewise1_v1.C_LG_V5276	hypothetical protein (531 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	147
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	2e-10
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-10
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	7e-10
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	1e-09
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	2e-09
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	3e-09
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	3e-09
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-09
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	5e-09
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	8e-09
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	1e-08
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-08
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	1e-08
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	2e-08
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	2e-08
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	3e-08
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	5e-08
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	7e-08
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	8e-08
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	9e-08
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	9e-08
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	9e-08
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-07
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	1e-07
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	2e-07
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	2e-07
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	3e-07
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	4e-07
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	9e-07
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	1e-06
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	2e-06
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	2e-06
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	2e-06
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	2e-06
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	2e-06
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	3e-06
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	4e-06
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	4e-06
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	4e-06
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	4e-06
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-06
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-06
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	8e-06
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	9e-06
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	9e-06
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-06
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	1e-05
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	2e-05
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-05
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	2e-05
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	2e-05
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	2e-05
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	2e-05
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-05
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-05
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	3e-05
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	3e-05
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	3e-05
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	3e-05
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	3e-05
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	3e-05
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	4e-05
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	4e-05
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-05
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	4e-05
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	5e-05
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	5e-05
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	5e-05
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	7e-05
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	7e-05
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	8e-05
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	8e-05
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	1e-04
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	1e-04
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	1e-04
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	1e-04
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	2e-04
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-04
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-04
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	2e-04
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	2e-04
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	3e-04
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	3e-04
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	4e-04
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	4e-04
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-04
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	5e-04
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	5e-04
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	5e-04
PLN00016	378	PLN00016, PLN00016, RNA-binding protein; Provision	6e-04
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	6e-04
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	6e-04
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	7e-04
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	7e-04
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	8e-04
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	8e-04
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	8e-04
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	0.001
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	0.001
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	0.001
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	0.001
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	0.001
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	0.001
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	0.001
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	0.001
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	0.001
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	0.002
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	0.002
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	0.002
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	0.002
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	0.002
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	0.002
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	0.003
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	0.003
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	0.003
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	0.003
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	0.003
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	0.003
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	0.003
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	0.004
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	0.004
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	0.004
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	0.004
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	0.004

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 56.5 bits (137), Expect = 2e-10
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQ 121
           VLITG T GIG ALA++FL+AG+ VII  R  ER+  A +
Sbjct: 8   VLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKK 47

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 56.1 bits (136), Expect = 2e-10
 Identities = 13/47 (27%), Positives = 26/47 (55%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGE 129
            L+TG++ GIG A+A+   + G  V++  R+E   + + ++    G 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGGN 47

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 54.9 bits (133), Expect = 7e-10
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVT 135
            L+TG+++GIG A+A +  K G  VII  RS   +   + + EE     V   
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSS--EEGAEEVVEELKAYGVKAL 51

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSLREEFGEQHV 132
           V+ITG+  GIG   A+E  K G +VII  R+E + + A   +++E G   V
Sbjct: 4   VVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKV 54

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 53.8 bits (130), Expect = 2e-09
 Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 76  PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG 128
             +     LITG++ GIG  LAK+  + G N+I+ +R  +++++  + L ++ G
Sbjct: 2   GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTG 55

Length = 265

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 53.4 bits (129), Expect = 3e-09
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
             L+T ++ GIG A+A+   + G  V IC+R+ E ++ A   LR     
Sbjct: 3   VALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAG 51

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 53.1 bits (128), Expect = 3e-09
 Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 3/50 (6%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQH 131
            VLITG++ GIG A A+ F KAG  +I+  R  R +  +Q L +E G + 
Sbjct: 2   TVLITGASSGIGEATARRFAKAGAKLILTGR--RAE-RLQELADELGAKF 48

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 52.9 bits (128), Expect = 4e-09
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSLREEFGEQHVCV 134
             L+TG+++GIG A+A      G  V+I   +E   ++    LR   GE  V V
Sbjct: 7   TALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLV 60

Length = 246

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 52.5 bits (126), Expect = 5e-09
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS---ERVDSAVQSLREEFGEQHVC 133
            L     L+TG++ GIG A+A+   + G  V++ +R    E  ++   +++E  G +   
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 134 V 134
           V
Sbjct: 62  V 62

Length = 251

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 52.0 bits (125), Expect = 8e-09
 Identities = 21/45 (46%), Positives = 28/45 (62%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEF 127
           +LITG   GIG ALAK FL+ G+ VIIC R+E   +  ++   E 
Sbjct: 8   ILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEI 52

Length = 245

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 51.8 bits (125), Expect = 1e-08
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG 128
             ITG   GIG A+AK F + G +V I  R  E +++A + +    G
Sbjct: 6   AFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATG 52

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 51.5 bits (124), Expect = 1e-08
 Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 25/71 (35%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-------------------------ERVD 117
           VLITG + GIG ALA      G  VI  +R+                         E + 
Sbjct: 3   VLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNLEVLELDVTDEESIK 62

Query: 118 SAVQSLREEFG 128
           +AV+ + E FG
Sbjct: 63  AAVKEVIERFG 73

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 51.2 bits (123), Expect = 1e-08
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSLREE 126
            LITG +KGIG+A+A+  L  G  V I +R +  ++ A   L  +
Sbjct: 9   ALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK 53

Length = 237

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 50.8 bits (122), Expect = 2e-08
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQ 130
             +ITG   GIG A AK  LK G  V I  R+E   +A   L+    + 
Sbjct: 2   VAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAA-AELQAINPKV 49

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 50.9 bits (122), Expect = 2e-08
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQ 130
            L+TG TKGIGYA+ +E    G  V  C+R+++    +     E+ E+
Sbjct: 9   ALVTGGTKGIGYAIVEELAGLGAEVYTCARNQK---ELDECLTEWREK 53

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 50.3 bits (121), Expect = 3e-08
 Identities = 16/32 (50%), Positives = 22/32 (68%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE 114
           VL+TG T+GIG  +A+ FL AG  V++C R  
Sbjct: 9   VLVTGGTRGIGAGIARAFLAAGATVVVCGRRA 40

Length = 252

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 49.5 bits (119), Expect = 5e-08
 Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 2/47 (4%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDN-VIICSR-SERVDSAVQSLREE 126
             L+TG+ +GIG+ + ++  K+G   VI+ +R  ER  +AV+ LR E
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAE 48

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 49.2 bits (118), Expect = 7e-08
 Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 1/45 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSLREE 126
           VLITG + GIG ALAKE +K G NVII +RSE +++ AV+ +  E
Sbjct: 4   VLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAE 48

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 49.2 bits (118), Expect = 8e-08
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQ 130
           NV++ G T GI   +A+ F +AG NV + SRS E+VD+AV  L++   E 
Sbjct: 11  NVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEG 60

Length = 264

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 49.0 bits (117), Expect = 9e-08
 Identities = 23/51 (45%), Positives = 38/51 (74%), Gaps = 2/51 (3%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSER-VDSAVQSLREEFGEQH 131
           NVL+T S++GIG+ +A+E LK G  V+I SR+E  ++ A++ L+ E+GE +
Sbjct: 2   NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELK-EYGEVY 51

Length = 259

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 49.4 bits (118), Expect = 9e-08
 Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSR-SERVDSAVQSLREEFGEQHV 132
           LITG++KGIG A+A+EFL  G +V+I +R ++ +  A   L EEF E+ V
Sbjct: 13  LITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREV 62

Length = 257

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 49.1 bits (118), Expect = 9e-08
 Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSLREEFG 128
            L+TG+ +GIG A+A      G  VI+         +  + +    G
Sbjct: 9   ALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGG 55

Length = 251

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 48.9 bits (117), Expect = 1e-07
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGE 129
           VL+TG   GIG A+A+ F +AG  V +C  SE   +A+ +       
Sbjct: 14  VLVTGGASGIGRAIAEAFAEAGARVHVCDVSE---AALAATAARLPG 57

Length = 264

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 48.7 bits (116), Expect = 1e-07
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSLRE 125
            L+TG+++GIG A A+     G  V IC+R E R+ +A     E
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELE 46

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 48.5 bits (116), Expect = 2e-07
 Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 2/53 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCV 134
           V+ITG + G+G A+AK F + G NV+I  R+ E+++ A   + E+F  Q + V
Sbjct: 4   VIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEI-EQFPGQVLTV 55

Length = 252

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHV 132
            ++TG + GIG A  +  L+AG +V IC R  ER+ SA   LRE+F    +
Sbjct: 11  AVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARL 61

Length = 265

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLRE 125
           +LITG+ + IG ALA   L  G  VI+  R+     A+  LR+
Sbjct: 5   ILITGAGQRIGLALAWHLLAQGQPVIVSYRTHY--PAIDGLRQ 45

Length = 236

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 47.2 bits (113), Expect = 4e-07
 Identities = 14/52 (26%), Positives = 23/52 (44%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
            L+TG+++GIG A+A      G  V +  RSE   +      +  G     +
Sbjct: 3   ALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAAL 54

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 45.6 bits (109), Expect = 9e-07
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-DNVIICSRSERVDSA---VQSLREEFGEQHVC 133
           VLITG T G+G ALA+     G  ++++ SR      A   V  L     E  V 
Sbjct: 3   VLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVA 57

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 45.7 bits (109), Expect = 1e-06
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHV 132
            L     LITG++ GIG A A+   +AG  V++ +R E     +++L +E G    
Sbjct: 3   TLKGKVALITGASSGIGEATARALAEAGAKVVLAARRE---ERLEALADEIGAGAA 55

Length = 246

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 3/50 (6%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREE 126
           +      LITG++ GIG A A  F KAG ++ + +RS+    A+++L  E
Sbjct: 3   LNSMPRALITGASSGIGKATALAFAKAGWDLALVARSQ---DALEALAAE 49

Length = 241

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 17/52 (32%), Positives = 26/52 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
           V+ITG++ GIG  LA    + G  +++ +R E     V+S   E G     V
Sbjct: 6   VIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHV 57

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 45.5 bits (108), Expect = 2e-06
 Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSLREEFGEQH 131
           L+TGS++GIGYALA+   +AG  VI+  R   ++ +A +SL+ +    H
Sbjct: 14  LVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAH 62

Length = 255

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII 109
            L+TG+  GIG  +A    K G  V+I
Sbjct: 7   ALVTGAASGIGLEIALALAKEGAKVVI 33

Length = 258

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHV 132
            VLITG++ GIG A A +  +AG  V + +R+ E +D  V  +R + G  H 
Sbjct: 373 VVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHA 424

Length = 657

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 44.6 bits (106), Expect = 3e-06
 Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 3/44 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREE 126
           VLITG++ GIG ALA+EF KAG NV + +R  R D  +  L+ E
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAAR--RTDR-LDELKAE 41

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 4e-06
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGE 129
            LITG T GIG   A++FL  G  V I  R     +++++ R E GE
Sbjct: 9   ALITGGTSGIGLETARQFLAEGARVAITGRDP---ASLEAARAELGE 52

Length = 249

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 44.5 bits (105), Expect = 4e-06
 Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREE 126
           L+TG+T GIG A+A+   K G  V +C+R  E + + V+ LRE 
Sbjct: 7   LVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREA 50

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 44.5 bits (106), Expect = 4e-06
 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 3/53 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVT 135
            ++TG+T GIG A A+E  K G NVI+ SR++     + ++ +E  E++   T
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQ---EKLDAVAKEIEEKYGVET 53

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 44.3 bits (105), Expect = 4e-06
 Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQ 130
            L+TG+  GIG A+A+    AG NV++   ++  +   ++  +  G+ 
Sbjct: 4   ALVTGAASGIGLAIARALAAAGANVVV---NDFGEEGAEAAAKVAGDA 48

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.9 bits (104), Expect = 5e-06
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 28/76 (36%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSER-------------------------- 115
           N LITG+ +GIG A+A    K G NV + +R+E                           
Sbjct: 9   NALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDY 68

Query: 116 --VDSAVQSLREEFGE 129
             V +A++ L+ E G 
Sbjct: 69  EEVTAAIEQLKNELGS 84

Length = 239

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.7 bits (104), Expect = 7e-06
 Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREE 126
            ++TG++ GIG  +A+ F   G  V++  R+ E  +     +   
Sbjct: 8   AIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAG 52

Length = 251

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 43.4 bits (103), Expect = 8e-06
 Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 3/50 (6%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQH 131
            +LITG++ G+G  +A+EF   G ++ +C+R  R D  ++ L+ E   ++
Sbjct: 4   KILITGASSGLGAGMAREFAAKGRDLALCAR--RTD-RLEELKAELLARY 50

Length = 248

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 9e-06
 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIIC-SRSERVDSAVQSLREE 126
           LITG++ GIG+A+AK + KAG  ++      E VD  + + RE 
Sbjct: 14  LITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL 57

Length = 265

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 43.3 bits (102), Expect = 9e-06
 Identities = 18/34 (52%), Positives = 23/34 (67%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERV 116
           VLITG+T GIG  LA ++ K G  VI C R++ V
Sbjct: 4   VLITGATSGIGKQLALDYAKQGWQVIACGRNQSV 37

Length = 240

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.3 bits (103), Expect = 9e-06
 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREE 126
            L+TG+ +G+G A+A    +AG +V++  RS  E  +  V+++   
Sbjct: 9   ALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL 54

Length = 249

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 42.8 bits (101), Expect = 1e-05
 Identities = 15/42 (35%), Positives = 29/42 (69%), Gaps = 1/42 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSR-SERVDSAVQSLR 124
           L+TGS +G+G+ +A+    AG +V++  R +  +++AV +LR
Sbjct: 15  LVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALR 56

Length = 256

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 16/52 (30%), Positives = 33/52 (63%), Gaps = 2/52 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
           VL+TG+++G+G A+A+ F + G  V++       +SA +++  E GE+ + +
Sbjct: 3   VLVTGASRGLGAAIARSFAREGARVVVNYYRST-ESA-EAVAAEAGERAIAI 52

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHV 132
             L+TG+++GIG A+A+     G NV+I   S   ++  ++L  E G    
Sbjct: 7   VALVTGASRGIGRAIAERLAAQGANVVINYASS--EAGAEALVAEIGALGG 55

Length = 248

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG 128
           VLITG++KGIG A A+ F   G ++ + +R  + +++    LR   G
Sbjct: 10  VLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHG 56

Length = 259

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSR-SERVDSAVQSLREE 126
           L+T ST GIG A+A+   + G +V++ SR  + VD AV +L+ E
Sbjct: 14  LVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGE 57

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVII-CSRSERVDSAVQSLREE 126
           N+LITGS +GIG+ LA    + G  +II    +ER + AV  LR+E
Sbjct: 11  NILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE 56

Length = 254

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 2/48 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSR-SERVDSAVQSLREEFGE 129
           VL+TG ++GIG  +A+ FL+AG  VII +R +E    A + L   +GE
Sbjct: 9   VLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEEL-SAYGE 55

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 42.1 bits (99), Expect = 3e-05
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVC 133
             LITG T+GIG A+A+ FL+ G  V +   S   ++  + LRE+      C
Sbjct: 9   VALITGGTRGIGRAIAEAFLREGAKVAVLYNSA--ENEAKELREKGVFTIKC 58

Length = 255

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
           VL+TG ++G+G A+A+ F + G  V++         A ++L +E G++ + +
Sbjct: 8   VLVTGGSRGLGAAIARAFAREGARVVVNYHQSE--DAAEALADELGDRAIAL 57

Length = 253

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 15/32 (46%), Positives = 25/32 (78%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE 114
           V+ITG+++G+G A+A + L+ G +VI  SR+E
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTHVISISRTE 35

Length = 251

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 42.2 bits (100), Expect = 3e-05
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 4/58 (6%)

Query: 76  PMLPPYN---VLITGSTKGIGYALAKEFLKAGDNVIICSRSER-VDSAVQSLREEFGE 129
            ML P     V+ITG++ G+G A A+ F + G  V++ +R E  +++    +R   GE
Sbjct: 1   MMLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGE 58

Length = 334

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLRE--EFGEQHVCV 134
             L+TG++ GIG A+A     AG NV++  RS+  D+A + + E    G + + V
Sbjct: 5   VALVTGASSGIGKAIAIRLATAGANVVVNYRSKE-DAAEEVVEEIKAVGGKAIAV 58

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 18/47 (38%), Positives = 29/47 (61%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFG 128
             L+TG+++GIG+ +A    +AG N++I SR+E      Q L E+ G
Sbjct: 7   VALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEG 53

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVII--CSRSERVDSAVQSLRE 125
            LP    L+TGS++GIG   AK    AG +V++    ++ R +  V  +  
Sbjct: 3   DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEA 53

Length = 248

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 41.6 bits (98), Expect = 3e-05
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLRE 125
           L+ G + GIG ALA+ F   G  V I SRS +R+ +A ++L  
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG 43

Length = 230

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 41.3 bits (98), Expect = 4e-05
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGD-NVIICSRSERVDSAVQSLREEFGEQHVCVT 135
            LITG   G+G ALA+   + G   +++ SRS        +L  E       VT
Sbjct: 3   YLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVT 56

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 41.4 bits (97), Expect = 4e-05
 Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 3/44 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREE 126
           V++TG ++GIG  + + F++ G  V+ C+R E   +A Q+L  E
Sbjct: 12  VIVTGGSRGIGRGIVRAFVENGAKVVFCARGE---AAGQALESE 52

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 14/27 (51%), Positives = 16/27 (59%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVI 108
            VLITG+  GIG A A+ FL  G  V 
Sbjct: 7   TVLITGAASGIGLAQARAFLAQGAQVY 33

Length = 235

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 28/75 (37%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII----------------------------CSRSE 114
           VLITG   GIG  LA EF K G  V+I                             S+ E
Sbjct: 2   VLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKRE 61

Query: 115 RVDSAVQSLREEFGE 129
            V  A + +++E G+
Sbjct: 62  EVYEAAKKIKKEVGD 76

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 41.5 bits (98), Expect = 5e-05
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 5/55 (9%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREE--FGEQHVCV 134
            VL+TG++ GIG ALA+    AG  +++  R+      +++L     +  +H  V
Sbjct: 7   RVLLTGASGGIGQALAEALAAAGARLLLVGRNA---EKLEALAARLPYPGRHRWV 58

Length = 263

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 41.3 bits (97), Expect = 5e-05
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICS-RSERVDSAVQSLREEFGEQ 130
           VL+TG+T G G  + + F++ G  VI    R ER    +Q L++E G+ 
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQER----LQELKDELGDN 47

Length = 248

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 41.3 bits (97), Expect = 5e-05
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICS--RSERVDSAVQSLREEFG 128
           L+TGST GIG  +A+    AG N+++     +  +++    L  + G
Sbjct: 6   LVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHG 52

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 40.7 bits (96), Expect = 7e-05
 Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSLREEFGEQHVCVT 135
           V+ITG+++GIG ALA    +AG  +++ +R+E R+ S  Q L +  GE  V  T
Sbjct: 4   VIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPT 57

Length = 263

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 41.0 bits (97), Expect = 7e-05
 Identities = 15/31 (48%), Positives = 19/31 (61%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS 113
            L+TG TKGIG A     L+AG  V+  +RS
Sbjct: 12  ALVTGGTKGIGAATVARLLEAGARVVTTARS 42

Length = 260

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 40.8 bits (96), Expect = 8e-05
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)

Query: 83  VLITGST-KGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSLREEFGEQHV 132
           VL+T +   GIG A A+  L+ G  V+I    E R+      L  E G   V
Sbjct: 20  VLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRV 71

Length = 262

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 40.7 bits (96), Expect = 8e-05
 Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICS-RSERVDSAVQSLREEFGEQH 131
            L+TG+ +G+G A A+   +AG  V      +        +L    G  H
Sbjct: 10  ALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAH 59

Length = 250

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQS 122
            ++ITG T  IG AL +    AG  V++ SR       +  
Sbjct: 1   KIVITGGTGFIGRALTRRLTAAGHEVVVLSRRPGKAEGLAE 41

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 15/51 (29%), Positives = 25/51 (49%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQ 130
               LI G+++G+G  L    L+ G  V    R  + D+A+Q+L     E+
Sbjct: 1   KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEK 51

Length = 225

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 5/57 (8%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSERVDSAVQSLREEFGEQHV-CVTWQ 137
            L+TG+ K IG A+A+     G  V++  +RSE   +  Q L++E        V  Q
Sbjct: 3   ALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSE---AEAQRLKDELNALRNSAVLVQ 56

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 4/52 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
            LITG   GIG AL + FL  G  V +  RS      + SLR+ FG+ HV V
Sbjct: 9   ALITGGGSGIGRALVERFLAEGARVAVLERSA---EKLASLRQRFGD-HVLV 56

Length = 263

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLRE 125
           VL+TG+ +GIGYA+A+   +AG  V    R+ E++   V  LR 
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRR 44

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 39.8 bits (94), Expect = 2e-04
 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 3/53 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVT 135
            L+TG+  GIG A AK     G  V++    E    A ++   E G     + 
Sbjct: 425 ALVTGAAGGIGKATAKRLAAEGACVVLADLDE---EAAEAAAAELGGPDRALG 474

Length = 681

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 39.4 bits (93), Expect = 2e-04
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC--SRSERVDSAVQSLREEFGEQHVCVT 135
            ++TG++ GIG A+A+   K G  V+I      E     ++ ++EE G+      
Sbjct: 8   AIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKA 62

Length = 247

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-DNVIICSRSERVDSAVQSLREEFGEQHVCV 134
            L+TG T+G+G A+A+ F + G   ++IC R+     A  +  E  G + V V
Sbjct: 9   ALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFV 61

Length = 260

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 4/53 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVT 135
            LITG   G+G AL + F+  G  V +  RS      V  LR +FG+  V   
Sbjct: 7   ALITGGGSGLGRALVERFVAEGAKVAVLDRSA---EKVAELRADFGD-AVVGV 55

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 39.1 bits (91), Expect = 3e-04
 Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSER-VDSAVQSLREE 126
             T S+KGIG+ +A+   +AG +VI+ SR+E  +  A + ++ E
Sbjct: 12  FTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSE 55

Length = 263

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 39.1 bits (92), Expect = 3e-04
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
            +ITG    +G A+AKE  +AG  V I  R+ E+ ++ V  ++   GE
Sbjct: 13  AVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGE 60

Length = 278

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 39.1 bits (91), Expect = 4e-04
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHV 132
           VL+TG+  GIG A  + F +AGD V++  R+       +   +  G  H 
Sbjct: 8   VLVTGAAGGIGRAACQRFARAGDQVVVADRN---VERARERADSLGPDHH 54

Length = 520

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 38.6 bits (90), Expect = 4e-04
 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 4/53 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSL-REEFGEQHVCV 134
            L+TG+ KGIG A  K   KAG  V+  SR++   + + SL RE  G + VCV
Sbjct: 10  ALVTGAGKGIGRATVKALAKAGARVVAVSRTQ---ADLDSLVRECPGIEPVCV 59

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 38.6 bits (90), Expect = 4e-04
 Identities = 19/53 (35%), Positives = 28/53 (52%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
            V I G ++G+GYA+A   LK G  V I SR+E     ++    ++G  H  V
Sbjct: 7   KVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVV 59

Length = 238

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 5e-04
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSER-VDSAVQSLREEFGEQHVC 133
           +ITG++ GIG A AK F + G  V++ +R +  +D  V  +R E GE    
Sbjct: 10  IITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVAL 60

Length = 254

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 38.1 bits (89), Expect = 5e-04
 Identities = 14/41 (34%), Positives = 24/41 (58%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSL 123
           VLI G+++GIG    +++   G  VI  +R     +A+Q+L
Sbjct: 4   VLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQAL 44

Length = 222

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 38.4 bits (90), Expect = 5e-04
 Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 5/46 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDN--VIICSRSERVDSAVQSLREE 126
           +++TG+++GIG ALA+E LK G    V++ +RSE     +Q L+EE
Sbjct: 2   IILTGASRGIGRALAEELLKRGSPSVVVLLARSE---EPLQELKEE 44

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|215029 PLN00016, PLN00016, RNA-binding protein; Provisional

 Score = 38.5 bits (90), Expect = 6e-04
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 9/95 (9%)

Query: 36  STVRFRRNCFSLRASKSYHSPIIRADSSSS-----SSSSSSVKREPMLPPYNVLI----T 86
           S+ R R +  S   S S  S I  A ++ +     +S  +       +    VLI    +
Sbjct: 3   SSSRLRSSSASSLLSSSSSSSISPALAARAQGSRRASQVAGAAAAAAVEKKKVLIVNTNS 62

Query: 87  GSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQ 121
           G    IG+ LAKE +KAG  V + +R +     ++
Sbjct: 63  GGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMK 97

Length = 378

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 38.1 bits (89), Expect = 6e-04
 Identities = 15/50 (30%), Positives = 31/50 (62%), Gaps = 1/50 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNV-IICSRSERVDSAVQSLREEFGEQ 130
             ++TG ++GIG A+A+   +AG +V II + + R +   + L +++G +
Sbjct: 10  VAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVK 59

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 38.1 bits (89), Expect = 6e-04
 Identities = 17/53 (32%), Positives = 27/53 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVT 135
           V+ITG++ GIG A A  F + G  V++ +RS      +     E G + + V 
Sbjct: 3   VVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVV 55

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 37.8 bits (88), Expect = 7e-04
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 2/48 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC--SRSERVDSAVQSLREEFG 128
           ++I+G T+GIG A+  EF ++G N+     S  E  +   + L +++G
Sbjct: 11  LVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYG 58

Length = 260

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 37.9 bits (89), Expect = 7e-04
 Identities = 14/27 (51%), Positives = 20/27 (74%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVI 108
            V +TG+ +GIGYA+A  F++AG  VI
Sbjct: 10  TVWVTGAAQGIGYAVALAFVEAGAKVI 36

Length = 252

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 37.8 bits (88), Expect = 8e-04
 Identities = 14/48 (29%), Positives = 23/48 (47%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQH 131
           +ITG++ GIG A A    + G  V+    +E V   V  ++   G+  
Sbjct: 10  VITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAK 57

Length = 272

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 37.7 bits (88), Expect = 8e-04
 Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 26/87 (29%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSE-------------------------RV 116
           VLITG+++GIG  L ++ L  G+N +I   R                            +
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEI 60

Query: 117 DSAVQSLREEFGEQHVCVTWQHSAALS 143
             + +++ E  G+  + V   ++  L 
Sbjct: 61  AESAEAVAERLGDAGLDVLINNAGILH 87

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 38.1 bits (89), Expect = 8e-04
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 4/46 (8%)

Query: 84  LITGSTKGIGYALAKEFLKAGD-NVIICSRS---ERVDSAVQSLRE 125
           L+TG   GIG ALA+   +     +++  RS      +   Q+L  
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAA 254

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 37.5 bits (87), Expect = 0.001
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQ 137
           LITG+ +GIG  +A+ F + G N+I+   S  ++     L    G  H C    
Sbjct: 10  LITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELC---GRGHRCTAVV 60

Length = 263

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 37.4 bits (87), Expect = 0.001
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSERVDSAVQSLREEFGEQHVCV 134
           V+ITG+  GIG   A+E  + G  VI+ C    + + A   +R +     V V
Sbjct: 4   VIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIV 56

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 37.4 bits (87), Expect = 0.001
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
             +ITG T  +G A+A+   +AG  V    R+ E+ D   + +    G 
Sbjct: 7   VAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGR 55

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 37.6 bits (88), Expect = 0.001
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSER 115
           +LITG T  IG AL +   K G  V I +RS  
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTILTRSPP 33

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 37.5 bits (87), Expect = 0.001
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICS-RSERVDSAVQSLREEFGEQHVC 133
             ++TG   GIG A+A    KAG +V+I   +SE  ++   ++++  G+    
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGL 53

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 37.3 bits (87), Expect = 0.001
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 19/66 (28%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-------------------SRSERVDSAVQSL 123
           +++TG + GIG A+ KE L  G NV+                     S +E V+  V  +
Sbjct: 12  IIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEI 71

Query: 124 REEFGE 129
            E+FG 
Sbjct: 72  IEKFGR 77

Length = 266

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 37.4 bits (87), Expect = 0.001
 Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 29/81 (35%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-----------------------------SRS 113
            +ITG+ +GIG A+A+     G N+++                              +  
Sbjct: 5   AIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVTDK 64

Query: 114 ERVDSAVQSLREEFGEQHVCV 134
           + V++ +    E+FG   V V
Sbjct: 65  DDVEALIDQAVEKFGSFDVMV 85

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 37.1 bits (86), Expect = 0.001
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVT 135
           L+TG+ +GIG A+A+E L  G  VI    S   D A     EE+G     V 
Sbjct: 6   LVTGAKRGIGSAIARELLNDGYRVIATYFSGN-DCAKD-WFEEYGFTEDQVR 55

Length = 245

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 37.2 bits (87), Expect = 0.001
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSR--SERVDSAVQSLRE 125
           L+TG  +GIG  +A+    AG ++ I  R   E + +  Q LR 
Sbjct: 6   LVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRA 49

Length = 256

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 36.8 bits (85), Expect = 0.002
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 4/71 (5%)

Query: 65  SSSSSSSVKREPMLP-PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSL 123
           S  +S++    P+   P  V ITG  +GIG A+A  F  AGD ++I    +R     + L
Sbjct: 253 SGPASTAQAPSPLAESPRVVAITGGARGIGRAVADRFAAAGDRLLII---DRDAEGAKKL 309

Query: 124 REEFGEQHVCV 134
            E  G++H+ V
Sbjct: 310 AEALGDEHLSV 320

Length = 520

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 36.7 bits (85), Expect = 0.002
 Identities = 13/51 (25%), Positives = 21/51 (41%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
           L+TG  +GIG  +A+   K G  V +   +E           + G + V  
Sbjct: 4   LVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAY 54

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 36.8 bits (86), Expect = 0.002
 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGE 129
           M      LITG + G G ALA+  L AG  V+   RSE   +A         +
Sbjct: 1   MSSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSE---AARADFEALHPD 50

Length = 277

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 36.4 bits (85), Expect = 0.002
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 79  PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGE 129
            P  V ITG++ GIG ALA+E+ + G  + + +R  R D A+Q+      +
Sbjct: 1   MPLKVFITGASSGIGQALAREYARQGATLGLVAR--RTD-ALQAFAARLPK 48

Length = 257

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREE 126
            L+TG+++GIG  +A+   + G  V +  R+   D A  S    
Sbjct: 3   ALVTGASRGIGIEIARALARDGYRVSLGLRNPE-DLAALSASGG 45

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 36.5 bits (85), Expect = 0.002
 Identities = 14/53 (26%), Positives = 21/53 (39%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVT 135
           V++TG   GIG A++    + G   +I  RS   D   + LR           
Sbjct: 10  VIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQV 62

Length = 258

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 36.2 bits (84), Expect = 0.003
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGE 129
           V+ITG + G+G A+A  F K    V+I  RS  E  +   + +++  GE
Sbjct: 10  VVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGE 58

Length = 261

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 36.3 bits (84), Expect = 0.003
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 22/77 (28%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERV-------------------DSAVQSL 123
            LI G+T GIG ALA+     G  +++  R                       +  V +L
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGALARPADVAAELEVWAL 60

Query: 124 REEFGEQHVCVTWQHSA 140
            +E G         ++A
Sbjct: 61  AQELGPLD---LLVYAA 74

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 36.3 bits (84), Expect = 0.003
 Identities = 13/32 (40%), Positives = 24/32 (75%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSER 115
           ++TG+ +G+G A+A  F +AG +V+I +R+E 
Sbjct: 14  VVTGAGRGLGAAIALAFAEAGADVLIAARTES 45

Length = 263

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 36.3 bits (84), Expect = 0.003
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 7/73 (9%)

Query: 62  SSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQ 121
           ++SSS+SS   +R   L     L+TG   GIG ++ + F K G  V I    +  D   Q
Sbjct: 3   TASSSASSLPSQR---LLGKVALVTGGATGIGESIVRLFHKHGAKVCI---VDLQDDLGQ 56

Query: 122 SLREEFG-EQHVC 133
           ++ +  G E +VC
Sbjct: 57  NVCDSLGGEPNVC 69

Length = 280

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 36.2 bits (84), Expect = 0.003
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 3/47 (6%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQ 130
            ITG+++G G A  +  L+ GD V+  +R     + +  L E++G++
Sbjct: 7   FITGASRGFGRAWTEAALERGDRVVATARDT---ATLADLAEKYGDR 50

Length = 275

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 36.1 bits (83), Expect = 0.003
 Identities = 12/33 (36%), Positives = 24/33 (72%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSER 115
           +L+TG+++G+G  +AK +  AG  VI+ +R ++
Sbjct: 9   ILVTGASQGLGEQVAKAYAAAGATVILVARHQK 41

Length = 239

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 36.2 bits (84), Expect = 0.003
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREE 126
             L+TG+ +GIG A+A+ F + G  V +        + A  ++  +
Sbjct: 9   VALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARD 54

Length = 260

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 35.7 bits (83), Expect = 0.004
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSERVDSAVQSLREEFGEQHVCVT 135
           ML    +LITG+   IG AL K  L+AG  VI      E ++  ++SL +EF  + + + 
Sbjct: 1   MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLV 60

Length = 256

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 35.9 bits (83), Expect = 0.004
 Identities = 16/31 (51%), Positives = 20/31 (64%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS 113
           VL+TG+TKGIG AL+      G  VI  +RS
Sbjct: 6   VLVTGATKGIGLALSLRLANLGHQVIGIARS 36

Length = 234

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score = 35.7 bits (83), Expect = 0.004
 Identities = 16/47 (34%), Positives = 18/47 (38%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGE 129
           +LITG T  IG AL     K G  V I +R     S          E
Sbjct: 1   ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVTLWE 47

Length = 297

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 35.4 bits (82), Expect = 0.004
 Identities = 11/37 (29%), Positives = 21/37 (56%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSA 119
             +TG+++GIG A+A    KAG  V++ +++      
Sbjct: 6   AFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDN 42

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 35.7 bits (83), Expect = 0.004
 Identities = 12/27 (44%), Positives = 14/27 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII 109
           V ITG  +GIG A A+     G  V I
Sbjct: 8   VAITGGARGIGLATARALAALGARVAI 34

Length = 273

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	147
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.4
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.38
PRK05854	313	short chain dehydrogenase; Provisional	99.35
KOG1208	314	consensus Dehydrogenases with different specificit	99.34
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.33
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.33
KOG0725	270	consensus Reductases with broad range of substrate	99.27
PRK06197	306	short chain dehydrogenase; Provisional	99.23
PRK08339	263	short chain dehydrogenase; Provisional	99.23
PRK07062	265	short chain dehydrogenase; Provisional	99.23
PRK07063	260	short chain dehydrogenase; Provisional	99.2
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.2
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.18
PRK05876	275	short chain dehydrogenase; Provisional	99.17
PRK05867	253	short chain dehydrogenase; Provisional	99.16
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.15
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.15
PRK09242	257	tropinone reductase; Provisional	99.15
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.15
PRK07478	254	short chain dehydrogenase; Provisional	99.14
PRK09186	256	flagellin modification protein A; Provisional	99.14
PRK08862	227	short chain dehydrogenase; Provisional	99.14
PRK08589	272	short chain dehydrogenase; Validated	99.13
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.12
PRK06139	330	short chain dehydrogenase; Provisional	99.12
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.12
PRK08303	305	short chain dehydrogenase; Provisional	99.12
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.12
PRK05866	293	short chain dehydrogenase; Provisional	99.11
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.11
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.11
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.1
PRK08265	261	short chain dehydrogenase; Provisional	99.1
PLN02780	320	ketoreductase/ oxidoreductase	99.09
PRK07035	252	short chain dehydrogenase; Provisional	99.08
PRK05872	296	short chain dehydrogenase; Provisional	99.08
PRK06114	254	short chain dehydrogenase; Provisional	99.08
PRK06194	287	hypothetical protein; Provisional	99.07
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.06
PRK07831	262	short chain dehydrogenase; Provisional	99.06
PRK07109	334	short chain dehydrogenase; Provisional	99.06
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.06
PRK07791	286	short chain dehydrogenase; Provisional	99.05
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.05
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.05
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.04
PLN02253	280	xanthoxin dehydrogenase	99.04
PRK06720	169	hypothetical protein; Provisional	99.04
PRK06125	259	short chain dehydrogenase; Provisional	99.04
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.03
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.03
PRK05717	255	oxidoreductase; Validated	99.03
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.02
PRK07890	258	short chain dehydrogenase; Provisional	99.02
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.02
PRK07576	264	short chain dehydrogenase; Provisional	99.02
PRK06172	253	short chain dehydrogenase; Provisional	99.01
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.01
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.01
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.01
PRK06128	300	oxidoreductase; Provisional	99.01
PRK08251	248	short chain dehydrogenase; Provisional	99.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	98.99
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	98.99
PRK06196	315	oxidoreductase; Provisional	98.99
PRK07825	273	short chain dehydrogenase; Provisional	98.99
PRK06138	252	short chain dehydrogenase; Provisional	98.98
PRK12747	252	short chain dehydrogenase; Provisional	98.98
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	98.98
PRK08226	263	short chain dehydrogenase; Provisional	98.97
PRK07774	250	short chain dehydrogenase; Provisional	98.97
PRK07067	257	sorbitol dehydrogenase; Provisional	98.97
PRK08278	273	short chain dehydrogenase; Provisional	98.97
PRK07814	263	short chain dehydrogenase; Provisional	98.97
PRK05599	246	hypothetical protein; Provisional	98.97
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	98.96
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.96
PRK08213	259	gluconate 5-dehydrogenase; Provisional	98.96
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	98.96
PRK08628	258	short chain dehydrogenase; Provisional	98.95
PRK07904	253	short chain dehydrogenase; Provisional	98.95
PRK09072	263	short chain dehydrogenase; Provisional	98.95
PRK07985	294	oxidoreductase; Provisional	98.94
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	98.94
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	98.94
PRK08643	256	acetoin reductase; Validated	98.94
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	98.93
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	98.93
PRK06914	280	short chain dehydrogenase; Provisional	98.93
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	98.93
PRK12939	250	short chain dehydrogenase; Provisional	98.93
PRK07677	252	short chain dehydrogenase; Provisional	98.93
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.92
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.92
PRK08936	261	glucose-1-dehydrogenase; Provisional	98.92
PRK05875	276	short chain dehydrogenase; Provisional	98.92
PRK07102	243	short chain dehydrogenase; Provisional	98.92
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	98.91
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	98.91
PRK06949	258	short chain dehydrogenase; Provisional	98.91
PRK06500	249	short chain dehydrogenase; Provisional	98.9
PRK12937	245	short chain dehydrogenase; Provisional	98.9
PRK07024	257	short chain dehydrogenase; Provisional	98.9
PRK07806	248	short chain dehydrogenase; Provisional	98.89
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	98.89
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	98.89
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.89
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	98.88
PRK12746	254	short chain dehydrogenase; Provisional	98.88
PRK06701	290	short chain dehydrogenase; Provisional	98.87
PRK08703	239	short chain dehydrogenase; Provisional	98.86
PRK09135	249	pteridine reductase; Provisional	98.86
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.86
PRK08340	259	glucose-1-dehydrogenase; Provisional	98.85
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	98.85
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	98.85
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	98.85
PRK06841	255	short chain dehydrogenase; Provisional	98.85
PRK12935	247	acetoacetyl-CoA reductase; Provisional	98.85
PRK12743	256	oxidoreductase; Provisional	98.85
PRK07326	237	short chain dehydrogenase; Provisional	98.84
PRK07856	252	short chain dehydrogenase; Provisional	98.84
PRK07454	241	short chain dehydrogenase; Provisional	98.84
PRK07201	657	short chain dehydrogenase; Provisional	98.84
PRK06398	258	aldose dehydrogenase; Validated	98.83
PRK09134	258	short chain dehydrogenase; Provisional	98.83
PRK06484	520	short chain dehydrogenase; Validated	98.82
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	98.82
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	98.82
PRK07832	272	short chain dehydrogenase; Provisional	98.82
PRK06057	255	short chain dehydrogenase; Provisional	98.82
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.81
PRK06484	520	short chain dehydrogenase; Validated	98.81
PRK12828	239	short chain dehydrogenase; Provisional	98.81
PRK06198	260	short chain dehydrogenase; Provisional	98.81
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.81
PRK12938	246	acetyacetyl-CoA reductase; Provisional	98.8
PRK05855	582	short chain dehydrogenase; Validated	98.8
PRK12744	257	short chain dehydrogenase; Provisional	98.8
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.79
PRK05650	270	short chain dehydrogenase; Provisional	98.79
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.79
PRK06940	275	short chain dehydrogenase; Provisional	98.78
PRK08267	260	short chain dehydrogenase; Provisional	98.78
PRK06101	240	short chain dehydrogenase; Provisional	98.78
PRK07775	274	short chain dehydrogenase; Provisional	98.77
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	98.77
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.76
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.76
PRK06180	277	short chain dehydrogenase; Provisional	98.76
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.76
PRK12742	237	oxidoreductase; Provisional	98.76
COG1028	251	FabG Dehydrogenases with different specificities (	98.76
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	98.75
TIGR02415	254	23BDH acetoin reductases. One member of this famil	98.74
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.74
PRK05993	277	short chain dehydrogenase; Provisional	98.74
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	98.74
PRK07074	257	short chain dehydrogenase; Provisional	98.74
PRK06182	273	short chain dehydrogenase; Validated	98.74
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.74
PRK06181	263	short chain dehydrogenase; Provisional	98.72
PRK12829	264	short chain dehydrogenase; Provisional	98.72
PRK08264	238	short chain dehydrogenase; Validated	98.72
PRK06523	260	short chain dehydrogenase; Provisional	98.71
PRK12827	249	short chain dehydrogenase; Provisional	98.7
PRK09291	257	short chain dehydrogenase; Provisional	98.7
PRK07069	251	short chain dehydrogenase; Validated	98.7
PRK06947	248	glucose-1-dehydrogenase; Provisional	98.7
PRK08263	275	short chain dehydrogenase; Provisional	98.7
PRK06483	236	dihydromonapterin reductase; Provisional	98.68
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	98.67
PRK06123	248	short chain dehydrogenase; Provisional	98.67
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.67
PRK06179	270	short chain dehydrogenase; Provisional	98.67
PRK12367	245	short chain dehydrogenase; Provisional	98.67
PLN03209	576	translocon at the inner envelope of chloroplast su	98.65
PRK07060	245	short chain dehydrogenase; Provisional	98.64
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.64
PRK08324	681	short chain dehydrogenase; Validated	98.63
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	98.63
PRK06924	251	short chain dehydrogenase; Provisional	98.63
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	98.63
PLN00015	308	protochlorophyllide reductase	98.62
PRK10538	248	malonic semialdehyde reductase; Provisional	98.61
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	98.59
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	98.58
PRK06482	276	short chain dehydrogenase; Provisional	98.57
PRK05884	223	short chain dehydrogenase; Provisional	98.57
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	98.57
PRK05693	274	short chain dehydrogenase; Provisional	98.55
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.55
PRK12824	245	acetoacetyl-CoA reductase; Provisional	98.55
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	98.53
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	98.5
PRK07041	230	short chain dehydrogenase; Provisional	98.5
PRK08177	225	short chain dehydrogenase; Provisional	98.47
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	98.47
PLN02583	297	cinnamoyl-CoA reductase	98.43
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	98.42
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	98.41
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.41
PRK08017	256	oxidoreductase; Provisional	98.41
PRK07023	243	short chain dehydrogenase; Provisional	98.39
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	98.38
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	98.38
PRK06953	222	short chain dehydrogenase; Provisional	98.37
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	98.37
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.37
PLN02240	352	UDP-glucose 4-epimerase	98.34
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	98.32
PRK08219	227	short chain dehydrogenase; Provisional	98.31
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.31
PRK07577	234	short chain dehydrogenase; Provisional	98.3
PRK08309	177	short chain dehydrogenase; Provisional	98.28
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.28
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	98.27
PLN02653	340	GDP-mannose 4,6-dehydratase	98.27
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.25
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.25
PLN02686	367	cinnamoyl-CoA reductase	98.24
PLN00198	338	anthocyanidin reductase; Provisional	98.23
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	98.22
PLN02896	353	cinnamyl-alcohol dehydrogenase	98.22
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	98.21
PLN02650	351	dihydroflavonol-4-reductase	98.19
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	98.18
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	98.18
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.15
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	98.15
PLN02572	442	UDP-sulfoquinovose synthase	98.14
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.13
PRK09009	235	C factor cell-cell signaling protein; Provisional	98.09
KOG1611	249	consensus Predicted short chain-type dehydrogenase	98.05
PLN02214	342	cinnamoyl-CoA reductase	98.04
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	98.0
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	97.98
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.88
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	97.87
PRK10675	338	UDP-galactose-4-epimerase; Provisional	97.86
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	97.85
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	97.83
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	97.75
TIGR01746	367	Thioester-redct thioester reductase domain. It has	97.62
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.59
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	97.59
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	97.59
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	97.57
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	97.55
PLN02427	386	UDP-apiose/xylose synthase	97.54
CHL00194	317	ycf39 Ycf39; Provisional	97.45
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.45
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.43
PRK07578	199	short chain dehydrogenase; Provisional	97.41
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	97.4
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.35
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.31
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.3
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.27
PRK14982	340	acyl-ACP reductase; Provisional	97.22
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.19
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	97.19
PLN02695	370	GDP-D-mannose-3',5'-epimerase	97.18
PLN02206	442	UDP-glucuronate decarboxylase	97.11
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.1
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	97.1
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	97.1
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	97.04
PLN02260	668	probable rhamnose biosynthetic enzyme	96.94
PRK09620	229	hypothetical protein; Provisional	96.93
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	96.87
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.86
PLN02778	298	3,5-epimerase/4-reductase	96.84
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.83
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	96.82
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	96.82
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	96.81
PLN00016	378	RNA-binding protein; Provisional	96.81
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	96.78
PRK07201	657	short chain dehydrogenase; Provisional	96.76
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	96.72
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	96.64
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	96.62
COG4982	866	3-oxoacyl-[acyl-carrier protein]	96.53
PLN02166	436	dTDP-glucose 4,6-dehydratase	96.53
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	96.52
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.48
PRK05865	854	hypothetical protein; Provisional	96.43
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.42
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	96.36
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	96.34
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.27
PLN02503	605	fatty acyl-CoA reductase 2	96.24
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	96.22
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.2
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	96.15
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	96.1
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.07
PLN02996	491	fatty acyl-CoA reductase	96.01
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.99
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	95.94
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.93
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	95.82
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.81
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	95.81
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	95.8
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.7
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	95.69
PRK06849	389	hypothetical protein; Provisional	95.69
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.6
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	95.58
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	95.42
PRK12320	699	hypothetical protein; Provisional	95.36
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	95.36
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.35
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	95.33
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.28
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.27
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	95.23
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	95.21
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	95.18
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.16
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	95.12
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	95.12
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.06
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	94.98
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.97
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.91
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	94.88
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.83
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	94.81
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.81
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	94.8
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.79
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	94.79
PRK13940	414	glutamyl-tRNA reductase; Provisional	94.74
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	94.71
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.65
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	94.62
PRK04148	134	hypothetical protein; Provisional	94.61
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	94.53
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	94.53
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	94.45
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	94.45
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	94.45
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.41
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.4
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	94.38
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.35
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.32
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	94.32
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	94.3
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	94.28
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	94.27
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	94.23
PRK08306	296	dipicolinate synthase subunit A; Reviewed	94.23
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	94.21
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.2
PRK06719	157	precorrin-2 dehydrogenase; Validated	94.18
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.18
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.14
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.12
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	94.03
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	94.01
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.0
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	93.97
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	93.94
PLN02494	477	adenosylhomocysteinase	93.91
COG3320	382	Putative dehydrogenase domain of multifunctional n	93.9
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	93.89
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	93.86
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.85
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.85
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.72
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	93.72
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.7
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	93.64
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	93.64
PTZ00075	476	Adenosylhomocysteinase; Provisional	93.63
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.62
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	93.51
PRK08655	437	prephenate dehydrogenase; Provisional	93.51
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.49
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	93.45
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.44
KOG2733	423	consensus Uncharacterized membrane protein [Functi	93.44
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.43
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	93.4
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.4
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	93.39
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.38
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	93.26
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	93.25
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	93.25
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	93.23
PLN02260	668	probable rhamnose biosynthetic enzyme	93.17
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	93.12
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.06
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	93.04
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.98
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	92.83
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	92.82
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	92.82
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	92.79
PLN00203	519	glutamyl-tRNA reductase	92.76
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	92.73
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	92.7
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.7
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	92.65
COG0190	283	FolD 5,10-methylene-tetrahydrofolate dehydrogenase	92.64
COG0569	225	TrkA K+ transport systems, NAD-binding component [	92.51
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	92.47
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	92.47
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	92.45
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.41
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	92.4
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	92.38
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	92.36
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.33
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	92.32
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	92.25
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	92.17
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.14
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.13
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	92.09
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	92.05
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	92.01
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	91.97
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	91.92
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	91.82
PRK14181	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.8
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	91.76
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.72
PLN02586	360	probable cinnamyl alcohol dehydrogenase	91.7
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	91.68
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	91.62
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	91.58
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	91.52
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	91.51
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	91.47
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	91.4
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	91.39
PTZ00354	334	alcohol dehydrogenase; Provisional	91.33
CHL00175	281	minD septum-site determining protein; Validated	91.32
PRK14968	188	putative methyltransferase; Provisional	91.28
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	91.26
PLN02178	375	cinnamyl-alcohol dehydrogenase	91.18
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	91.17
PRK13771	334	putative alcohol dehydrogenase; Provisional	91.16
TIGR01968	261	minD_bact septum site-determining protein MinD. Th	91.13
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	91.02
PLN02740	381	Alcohol dehydrogenase-like	90.95
PRK14168	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.89
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	90.84
COG2894	272	MinD Septum formation inhibitor-activating ATPase	90.83
PLN02869	620	fatty aldehyde decarbonylase	90.79
PRK14167	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.73
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	90.61
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	90.58
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	90.54
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	90.5
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	90.48
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	90.48
PF01861	243	DUF43: Protein of unknown function DUF43; InterPro	90.4
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	90.31
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	90.27
PRK14185	293	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.24
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	90.2
PRK14174	295	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.18
TIGR03815	322	CpaE_hom_Actino helicase/secretion neighborhood Cp	90.01
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	90.0
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	89.98
PLN02928	347	oxidoreductase family protein	89.95
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	89.95
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	89.93
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	89.89
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	89.86
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	89.82
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	89.79
TIGR02279	503	PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa	89.76
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	89.76
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	89.65
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	89.63
cd08252	336	AL_MDR Arginate lyase and other MDR family members	89.62
PRK09496	453	trkA potassium transporter peripheral membrane com	89.61
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	89.59
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	89.51
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	89.34
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	89.31
PRK13243	333	glyoxylate reductase; Reviewed	89.26
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	89.25
PRK08268	507	3-hydroxy-acyl-CoA dehydrogenase; Validated	89.2
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	89.16
PRK15116	268	sulfur acceptor protein CsdL; Provisional	89.15
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	89.12
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	89.11
COG2910	211	Putative NADH-flavin reductase [General function p	89.09
PRK13265	154	glycine/sarcosine/betaine reductase complex protei	88.98
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	88.95
PTZ00079	454	NADP-specific glutamate dehydrogenase; Provisional	88.94

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.40  E-value=7.2e-13  Score=106.07  Aligned_cols=72  Identities=29%  Similarity=0.331  Sum_probs=64.0

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+..+.|||++|||+++|||.++|++|++.|++++++.|. ++++++.+++.+......+++.++|++|.++.
T Consensus         6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~   78 (282)
T KOG1205|consen    6 FMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESV   78 (282)
T ss_pred             cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHH
Confidence            3557899999999999999999999999999999999999 88888889998776554589999999998875

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.38  E-value=2.4e-12  Score=102.27  Aligned_cols=68  Identities=26%  Similarity=0.409  Sum_probs=61.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.++.++||||++|||+++|+.|+++|++|++++|+ ++++++.++|+..++ ..+.+..+|+++.++.
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~-v~v~vi~~DLs~~~~~   71 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTG-VEVEVIPADLSDPEAL   71 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhC-ceEEEEECcCCChhHH
Confidence            4678999999999999999999999999999999999 999999999998864 4688999999988764

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.35  E-value=6.8e-12  Score=101.16  Aligned_cols=71  Identities=24%  Similarity=0.420  Sum_probs=61.8

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+++||+++||||++|||++++++|++.|++|++++|+ +.+++..+++.+..+...+.+..+|+++.+++
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv   80 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASV   80 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHH
Confidence            456889999999999999999999999999999999999 77888888887665555678889999998765

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.34  E-value=4e-12  Score=103.38  Aligned_cols=73  Identities=26%  Similarity=0.367  Sum_probs=66.9

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRHY  146 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~~  146 (147)
                      ...++.|++++|||+++|||+++|+.|+.+|++|++.+|+ +..+++.++|....+...+.+.++|+++.+++.
T Consensus        29 ~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~  102 (314)
T KOG1208|consen   29 HGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVR  102 (314)
T ss_pred             ccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHH
Confidence            3557889999999999999999999999999999999999 889999999988777788999999999998874

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.33  E-value=4.1e-12  Score=101.84  Aligned_cols=71  Identities=23%  Similarity=0.296  Sum_probs=63.9

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhhhC
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRHYA  147 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~~~  147 (147)
                      +..+++|++++||||++|||+++|++|+++|+++++.|.+ +..+++++++.+. |  .+..+.||+++.+++|+
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~-g--~~~~y~cdis~~eei~~  103 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI-G--EAKAYTCDISDREEIYR  103 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc-C--ceeEEEecCCCHHHHHH
Confidence            3567999999999999999999999999999999999999 7788888888765 3  68999999999998874

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.33  E-value=5.6e-12  Score=98.66  Aligned_cols=64  Identities=25%  Similarity=0.358  Sum_probs=56.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .+++|+++|||+++|||.++|++|++.|++|++.+|+ ++++++..++.+    ..+.+...||+|.++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~   67 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAA   67 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHH
Confidence            4678999999999999999999999999999999999 888888877754    357788889998865

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.27  E-value=2.9e-11  Score=96.44  Aligned_cols=70  Identities=30%  Similarity=0.284  Sum_probs=60.4

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhC-CceEEEEeccccchhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG-EQHVCVTWQHSAALSR  144 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~  144 (147)
                      +..+.||+++|||+++|||+++|+.|++.|++|++++|+ +.+++...++..... ...+....+|+++.++
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   74 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVD   74 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHH
Confidence            457999999999999999999999999999999999999 888888887766433 3468889999997764

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.23  E-value=7.9e-11  Score=94.15  Aligned_cols=72  Identities=18%  Similarity=0.292  Sum_probs=60.1

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ...++++|+++||||++|||+++++.|+++|++|++++|+ +.+++..+++.+..+...+.+..+|+++.+++
T Consensus        10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v   82 (306)
T PRK06197         10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASV   82 (306)
T ss_pred             ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHH
Confidence            3467899999999999999999999999999999999999 76777777776554444577888999988754

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.23  E-value=5.9e-11  Score=93.19  Aligned_cols=68  Identities=26%  Similarity=0.356  Sum_probs=57.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++||+++||||++|||+++++.|+++|++|++++|+ +.+++..+++....+ ..+.+..+|++|.+++
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~i   73 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESN-VDVSYIVADLTKREDL   73 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CceEEEEecCCCHHHH
Confidence            5789999999999999999999999999999999999 777777777755433 3467788899988654

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.23  E-value=6.5e-11  Score=92.28  Aligned_cols=70  Identities=31%  Similarity=0.426  Sum_probs=60.1

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++||+++||||++|||+++++.|+++|++|++++|+ +.+++..+++.+.++...+.+..+|++|.+++
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   74 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADV   74 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHH
Confidence            35789999999999999999999999999999999999 77787777776665444677888999988764

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.20  E-value=1.1e-10  Score=90.74  Aligned_cols=69  Identities=20%  Similarity=0.312  Sum_probs=57.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++|||+++|||+++++.|+++|++|++++|+ +.+++..+++........+.+..+|+++.++.
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   73 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASV   73 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHH
Confidence            4789999999999999999999999999999999999 77777777776532334577888999987654

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.20  E-value=1.1e-10  Score=91.42  Aligned_cols=72  Identities=15%  Similarity=0.176  Sum_probs=55.3

Q ss_pred             CCCCCCCCCCeEEEeCCC--ChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           72 VKREPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        72 ~~~~~~l~gkv~vVTG~s--~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+.++++||+++||||+  +|||+++|++|+++|++|++++|+++..+..+++.++.+.  +.+..+|++|.+++
T Consensus         2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~v   75 (258)
T PRK07533          2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDA--PIFLPLDVREPGQL   75 (258)
T ss_pred             CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhcc--ceEEecCcCCHHHH
Confidence            345667899999999998  5999999999999999999999984333444555444332  45678999988764

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.18  E-value=9.8e-11  Score=94.31  Aligned_cols=66  Identities=29%  Similarity=0.436  Sum_probs=60.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRHY  146 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~~  146 (147)
                      |++++||||+.|||++.|++||++|.+|+++.|+ ++++.+.+||++.++ ..+.+...|.++.+..|
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~~y  115 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDEVY  115 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCchhH
Confidence            4899999999999999999999999999999999 999999999999887 67888888988877654

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.17  E-value=1.9e-10  Score=91.06  Aligned_cols=68  Identities=28%  Similarity=0.368  Sum_probs=57.0

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..++||+++||||++|||+++++.|+++|++|++++|+ +.+++..+++... + ..+.+..+|++|.++.
T Consensus         2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~-~-~~~~~~~~Dv~d~~~v   70 (275)
T PRK05876          2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE-G-FDVHGVMCDVRHREEV   70 (275)
T ss_pred             CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEEeCCCCCHHHH
Confidence            35789999999999999999999999999999999999 7777777777543 2 3467788999988764

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.16  E-value=2e-10  Score=89.11  Aligned_cols=68  Identities=24%  Similarity=0.347  Sum_probs=56.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+++|+++|||+++|||.++++.|+++|++|++++|+ +.+++..+++... + ..+.+..+|+++.+++
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~   73 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS-G-GKVVPVCCDVSQHQQV   73 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-C-CeEEEEEccCCCHHHH
Confidence            45789999999999999999999999999999999999 7777777777543 3 3467778999987654

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.15  E-value=2e-10  Score=91.08  Aligned_cols=67  Identities=21%  Similarity=0.331  Sum_probs=53.6

Q ss_pred             CCCCCeEEEeCCC--ChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s--~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++||+++||||+  +|||+++|+.|+++|++|++++|+++.++..+++.++.+..  .++.+|++|.+++
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~--~~~~~Dv~d~~~v   70 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD--YVYELDVSKPEHF   70 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc--eEEEecCCCHHHH
Confidence            4679999999997  89999999999999999999999854455566665554433  4678899988764

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.15  E-value=2.3e-10  Score=89.32  Aligned_cols=70  Identities=21%  Similarity=0.321  Sum_probs=56.8

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +..+++|+++||||++|||+++++.|++.|++|++++++  +.+++..+++....+ ..+.+..+|++|.+++
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~   74 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYG-IKAKAYPLNILEPETY   74 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHH
Confidence            346889999999999999999999999999999988765  566666667655433 3577889999987754

>PRK09242 tropinone reductase; Provisional

Probab=99.15  E-value=3.1e-10  Score=88.06  Aligned_cols=71  Identities=35%  Similarity=0.467  Sum_probs=59.9

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++.+++|+++|||+++|||..+++.|+++|++|++++|+ +.+++..+++....+...+.+..+|+++.+++
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~   75 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDR   75 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHH
Confidence            456889999999999999999999999999999999999 77777777776554445678889999987653

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.15  E-value=1.8e-10  Score=90.27  Aligned_cols=70  Identities=16%  Similarity=0.257  Sum_probs=52.7

Q ss_pred             CCCCCCeEEEeCCC--ChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s--~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++||+++||||+  +|||+++|++|+++|++|++++|+++.++..+++.++.....+.+..+|++|.+++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v   74 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEI   74 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHH
Confidence            45789999999997  89999999999999999999987632223334444433233567788999988764

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.14  E-value=2.7e-10  Score=88.28  Aligned_cols=68  Identities=28%  Similarity=0.368  Sum_probs=56.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++|+++||||++|||.++++.|++.|++|++++|+ +.+++..+++... + ..+.+..+|+++.++.
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   70 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE-G-GEAVALAGDVRDEAYA   70 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEEcCCCCHHHH
Confidence            35789999999999999999999999999999999999 7777777777543 2 2467778899987653

>PRK09186 flagellin modification protein A; Provisional

Probab=99.14  E-value=2.5e-10  Score=88.17  Aligned_cols=69  Identities=30%  Similarity=0.372  Sum_probs=57.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++|||+++|||+++++.|+++|++|++++|+ +.+++..+++....+...+.+..+|++|.++.
T Consensus         1 ~~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~   70 (256)
T PRK09186          1 MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESL   70 (256)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHH
Confidence            3678999999999999999999999999999999999 77777777775554444566778899987764

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.14  E-value=2.5e-10  Score=88.22  Aligned_cols=67  Identities=13%  Similarity=0.229  Sum_probs=56.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++||+++|||+++|||+++++.|++.|++|++++|+ +.+++..+++.+. +. .+..+.+|+.+.++.
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~-~~-~~~~~~~D~~~~~~~   69 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL-TD-NVYSFQLKDFSQESI   69 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CC-CeEEEEccCCCHHHH
Confidence            5789999999999999999999999999999999999 7778877777553 33 356677888887754

>PRK08589 short chain dehydrogenase; Validated

Probab=99.13  E-value=3.6e-10  Score=88.93  Aligned_cols=67  Identities=22%  Similarity=0.283  Sum_probs=55.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++||||++|||+++++.|+++|++|++++|++.+++..+++.+. + ..+.+..+|+++.+++
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~   69 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSN-G-GKAKAYHVDISDEQQV   69 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhc-C-CeEEEEEeecCCHHHH
Confidence            47899999999999999999999999999999999996666777777543 2 2467788899987654

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.12  E-value=3.1e-10  Score=89.74  Aligned_cols=68  Identities=19%  Similarity=0.283  Sum_probs=52.7

Q ss_pred             CCCCCCeEEEeCCCC--hHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~--GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++++|+++||||++  |||+++|++|+++|++|++++|++...+..+++.++.+.  ..+..+|++|.+++
T Consensus         3 ~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~--~~~~~~Dv~d~~~v   72 (271)
T PRK06505          3 GLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGS--DFVLPCDVEDIASV   72 (271)
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCC--ceEEeCCCCCHHHH
Confidence            357899999999996  999999999999999999999884333445555444333  24678999988764

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.12  E-value=3.2e-10  Score=92.48  Aligned_cols=68  Identities=26%  Similarity=0.384  Sum_probs=57.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+++|+++|||+++|||+++++.|+++|++|++++|+ +.+++..+++.+. + ..+.+..+|++|.+++
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~-g-~~~~~~~~Dv~d~~~v   71 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL-G-AEVLVVPTDVTDADQV   71 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-C-CcEEEEEeeCCCHHHH
Confidence            45789999999999999999999999999999999999 7778777777543 3 3466778899988764

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.12  E-value=4.2e-10  Score=87.18  Aligned_cols=69  Identities=33%  Similarity=0.417  Sum_probs=57.1

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.+++|+++||||++|||.+++++|+++|++|++++|+ +.+++..+++... + ..+....+|+++.++.
T Consensus         4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~~   73 (254)
T PRK08085          4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE-G-IKAHAAPFNVTHKQEV   73 (254)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-C-CeEEEEecCCCCHHHH
Confidence            456889999999999999999999999999999999999 7777777777543 2 3466778899887653

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.12  E-value=3.5e-10  Score=91.20  Aligned_cols=68  Identities=21%  Similarity=0.268  Sum_probs=53.6

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-h----------hHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-E----------RVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~----------~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +.++||+++||||++|||+++|++|++.|++|++++|+ +          .+++..+++... + ..+.+..+|+++.++
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~Dv~~~~~   81 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA-G-GRGIAVQVDHLVPEQ   81 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc-C-CceEEEEcCCCCHHH
Confidence            45789999999999999999999999999999999997 2          344445555332 3 245678899998876


Q ss_pred             h
Q 032098          145 H  145 (147)
Q Consensus       145 ~  145 (147)
                      +
T Consensus        82 v   82 (305)
T PRK08303         82 V   82 (305)
T ss_pred             H
Confidence            4

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.12  E-value=3.1e-10  Score=89.46  Aligned_cols=67  Identities=18%  Similarity=0.323  Sum_probs=54.1

Q ss_pred             CCCCCeEEEeCCCC--hHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~--GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++||+++||||++  |||+++|++|+++|++|++++|++.+++..+++..+.+  ...+..+|++|.+++
T Consensus         3 ~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v   71 (262)
T PRK07984          3 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG--SDIVLPCDVAEDASI   71 (262)
T ss_pred             ccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccC--CceEeecCCCCHHHH
Confidence            47899999999986  99999999999999999999988555566667765533  245678999988764

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.11  E-value=6.4e-10  Score=88.90  Aligned_cols=69  Identities=23%  Similarity=0.365  Sum_probs=57.2

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..++.+|+++||||++|||+++++.|++.|++|++++|+ +.+++..+++... +. .+.+..+|++|.+++
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~-~~-~~~~~~~Dl~d~~~v  104 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA-GG-DAMAVPCDLSDLDAV  104 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHH
Confidence            456789999999999999999999999999999999999 7777777777543 22 466778899987654

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.11  E-value=4.4e-10  Score=88.06  Aligned_cols=68  Identities=26%  Similarity=0.273  Sum_probs=54.0

Q ss_pred             CCCCCCeEEEeCCCC--hHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~--GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..++||+++||||++  |||+++|+.|+++|++|++.+|++..++..+++.++.+.  ..+..+|++|.+++
T Consensus         4 ~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~--~~~~~~Dv~~~~~v   73 (260)
T PRK06603          4 GLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGC--NFVSELDVTNPKSI   73 (260)
T ss_pred             cccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCC--ceEEEccCCCHHHH
Confidence            346899999999997  999999999999999999999885455566667555443  23567899988764

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.11  E-value=3.7e-10  Score=88.53  Aligned_cols=67  Identities=21%  Similarity=0.307  Sum_probs=53.8

Q ss_pred             CCCCCeEEEeCC--CChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~--s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++||||  ++|||+++|++|+++|++|++++|+++.++..+++..+.+.  ...+.+|++|.+++
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Dv~~~~~v   71 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDS--ELVFRCDVASDDEI   71 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCC--ceEEECCCCCHHHH
Confidence            478999999997  78999999999999999999998875555666666555433  34678999998764

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.10  E-value=3.5e-10  Score=88.20  Aligned_cols=66  Identities=17%  Similarity=0.268  Sum_probs=52.6

Q ss_pred             CCCCCCeEEEeCCC--ChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s--~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++||+++||||+  +|||++++++|+++|++|++++|+++.++..+++.    ...+.++.+|+++.+++
T Consensus         3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v   70 (252)
T PRK06079          3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLV----DEEDLLVECDVASDESI   70 (252)
T ss_pred             cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhc----cCceeEEeCCCCCHHHH
Confidence            34789999999999  89999999999999999999999854444444442    12467788999988764

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.10  E-value=5.2e-10  Score=87.42  Aligned_cols=64  Identities=22%  Similarity=0.234  Sum_probs=52.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||+++++.|+++|++|++++|+ +.+++..+++    + ..+.+..+|+++.++.
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dl~~~~~~   67 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL----G-ERARFIATDITDDAAI   67 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----C-CeeEEEEecCCCHHHH
Confidence            4789999999999999999999999999999999999 5555554443    2 2467778999988754

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.09  E-value=4.7e-10  Score=91.02  Aligned_cols=64  Identities=19%  Similarity=0.361  Sum_probs=54.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccc
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAA  141 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~  141 (147)
                      ..|++++||||++|||+++|++|+++|++|++++|+ +.+++..+++.+.++...+....+|+++
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~  115 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG  115 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC
Confidence            358999999999999999999999999999999999 8888888888766544456677788874

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.08  E-value=8.6e-10  Score=85.24  Aligned_cols=69  Identities=25%  Similarity=0.335  Sum_probs=56.5

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++++|+++||||++|||.++++.|++.|++|++++|+ +.+++..+++.+. + ..+.+..+|+++.++.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   72 (252)
T PRK07035          3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA-G-GKAEALACHIGEMEQI   72 (252)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEEEcCCCCHHHH
Confidence            346889999999999999999999999999999999999 6677777777543 3 2456778899887654

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.08  E-value=6.1e-10  Score=88.89  Aligned_cols=68  Identities=19%  Similarity=0.297  Sum_probs=55.2

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+++||+++||||++|||+++++.|++.|++|++++|+ +.+++..+++..   ...+....+|++|.++.
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v   72 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAM   72 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHH
Confidence            456889999999999999999999999999999999999 666666665531   23456667899987654

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.08  E-value=9.3e-10  Score=85.48  Aligned_cols=69  Identities=16%  Similarity=0.215  Sum_probs=55.6

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-h-hHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-E-RVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~-~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++++|+++|||+++|||.+++++|+++|++|++++|+ + .+++..+++... + ..+.+..+|+++.+++
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~i   73 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA-G-RRAIQIAADVTSKADL   73 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-C-CceEEEEcCCCCHHHH
Confidence            456899999999999999999999999999999999998 3 456666666543 3 2456778899987654

>PRK06194 hypothetical protein; Provisional

Probab=99.07  E-value=9.2e-10  Score=86.72  Aligned_cols=67  Identities=21%  Similarity=0.276  Sum_probs=55.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++...  ...+.+..+|++|.++.
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~   70 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQV   70 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHH
Confidence            4678999999999999999999999999999999999 6667776666543  23567788999987653

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.06  E-value=7.4e-10  Score=89.20  Aligned_cols=68  Identities=25%  Similarity=0.322  Sum_probs=56.0

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+++|+++||||++|||+++++.|+++|++|++++|+ +.+++..+++..  ....+.+..+|+++.+++
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v   70 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI--PPDSYTIIHIDLGDLDSV   70 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc--cCCceEEEEecCCCHHHH
Confidence            34678999999999999999999999999999999999 677777766642  223567788999988764

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.06  E-value=1.9e-09  Score=84.01  Aligned_cols=70  Identities=26%  Similarity=0.338  Sum_probs=57.7

Q ss_pred             CCCCCCeEEEeCCC-ChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGST-KGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s-~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+++|+++||||+ +|||+++++.|+++|++|++++|+ +.+++..+++.+..+...+.+..+|+++.++.
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   84 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQV   84 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHH
Confidence            45678999999998 599999999999999999999999 77777777776655544577788999987653

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.06  E-value=1e-09  Score=89.43  Aligned_cols=68  Identities=24%  Similarity=0.384  Sum_probs=57.3

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+++|+++||||++|||+++++.|+++|++|++++|+ +.+++..+++.+. + ..+.+..+|++|.++.
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~-g-~~~~~v~~Dv~d~~~v   72 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA-G-GEALAVVADVADAEAV   72 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc-C-CcEEEEEecCCCHHHH
Confidence            45788999999999999999999999999999999999 7777777777543 3 3467788999988764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.06  E-value=1.1e-09  Score=85.94  Aligned_cols=69  Identities=25%  Similarity=0.279  Sum_probs=56.9

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++... + ..+.+..+|+++.+++
T Consensus         5 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~v   74 (278)
T PRK08277          5 LFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA-G-GEALAVKADVLDKESL   74 (278)
T ss_pred             eeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEEECCCCCHHHH
Confidence            346789999999999999999999999999999999999 6677777776543 2 3577888999987653

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.05  E-value=1.1e-09  Score=87.18  Aligned_cols=67  Identities=22%  Similarity=0.309  Sum_probs=53.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC----------hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS----------ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~----------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++||||++|||+++++.|++.|++|++++++          +.+++..+++... + ..+.+..+|+++.+++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~Dv~~~~~v   79 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA-G-GEAVANGDDIADWDGA   79 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc-C-CceEEEeCCCCCHHHH
Confidence            4789999999999999999999999999999998875          3455556666443 2 2466788999988764

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.05  E-value=1.4e-09  Score=87.28  Aligned_cols=69  Identities=16%  Similarity=0.239  Sum_probs=56.6

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+++||+++||||++|||++++++|+++|++|++++++  +.+++..+++... + ..+.+..+|+++.+++
T Consensus         7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~-g-~~~~~~~~Dv~d~~~~   77 (306)
T PRK07792          7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA-G-AKAVAVAGDISQRATA   77 (306)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc-C-CeEEEEeCCCCCHHHH
Confidence            356899999999999999999999999999999999986  4566667777543 3 3567788999987654

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.05  E-value=1.3e-09  Score=84.34  Aligned_cols=69  Identities=26%  Similarity=0.382  Sum_probs=57.7

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +..+++|+++|||+++|||.++++.|+++|++|++++|+ +.+++..+++... +. .+.+..+|+++.++.
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~   75 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA-GG-AAEALAFDIADEEAV   75 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc-CC-ceEEEEccCCCHHHH
Confidence            556899999999999999999999999999999999999 6777777777543 32 467888999987754

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.04  E-value=1.5e-09  Score=84.10  Aligned_cols=68  Identities=31%  Similarity=0.428  Sum_probs=55.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++++|+++||||++|||++++++|+++|++|++.+|+ +.+++..+++... + ..+.+..+|+++.+++
T Consensus         6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~-~~~~~~~~D~~~~~~~   74 (255)
T PRK07523          6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ-G-LSAHALAFDVTDHDAV   74 (255)
T ss_pred             cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-C-ceEEEEEccCCCHHHH
Confidence            35789999999999999999999999999999999999 6666666666443 2 3467788899987653

>PLN02253 xanthoxin dehydrogenase

Probab=99.04  E-value=1.5e-09  Score=85.33  Aligned_cols=68  Identities=26%  Similarity=0.348  Sum_probs=54.6

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ...+++|+++||||++|||.+++++|+++|++|++++|+ +..++..+++.   ....+.+..+|++|.++.
T Consensus        13 ~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~   81 (280)
T PLN02253         13 SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG---GEPNVCFFHCDVTVEDDV   81 (280)
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc---CCCceEEEEeecCCHHHH
Confidence            446789999999999999999999999999999999998 55555555542   123577888999987664

>PRK06720 hypothetical protein; Provisional

Probab=99.04  E-value=1.7e-09  Score=80.66  Aligned_cols=68  Identities=21%  Similarity=0.211  Sum_probs=55.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+++|+++||||++|||.++++.|++.|++|++++++ +.+++..+++.+. +. ...+..+|+++.++.
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dl~~~~~v   80 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL-GG-EALFVSYDMEKQGDW   80 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHH
Confidence            34789999999999999999999999999999999998 6667777777533 33 355678999887653

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.04  E-value=1.6e-09  Score=84.20  Aligned_cols=68  Identities=29%  Similarity=0.421  Sum_probs=56.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++|||+++|||+++++.|++.|++|++++|+ +.+++..+++....+ ..+.+..+|+++.+++
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~   72 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHG-VDVAVHALDLSSPEAR   72 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcC-CceEEEEecCCCHHHH
Confidence            4789999999999999999999999999999999999 777777777765433 3467788899987764

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.03  E-value=1.2e-09  Score=85.06  Aligned_cols=65  Identities=35%  Similarity=0.469  Sum_probs=51.5

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+++|+++||||++|||+++++.|++.|++|++++|+ +.+++..+++    + ..+.+..+|+++.+++
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~~   67 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF----G-DHVLVVEGDVTSYADN   67 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----C-CcceEEEccCCCHHHH
Confidence            34789999999999999999999999999999999999 5555443332    2 2456778899887653

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.03  E-value=1.6e-09  Score=84.15  Aligned_cols=67  Identities=24%  Similarity=0.326  Sum_probs=53.6

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++||||++|||.+++++|+++|++|++++|++...+..+++... + ..+.+..+|+++.++.
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   71 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAA-G-GEALALTADLETYAGA   71 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhc-C-CeEEEEEEeCCCHHHH
Confidence            47899999999999999999999999999999999985455555555433 2 3466778899987653

>PRK05717 oxidoreductase; Validated

Probab=99.03  E-value=1.6e-09  Score=84.12  Aligned_cols=67  Identities=22%  Similarity=0.324  Sum_probs=53.6

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +..+++||+++||||++|||.++++.|+++|++|++++++ +..++..+++    + ..+.+..+|+++.+++
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----~-~~~~~~~~Dl~~~~~~   71 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL----G-ENAWFIAMDVADEAQV   71 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc----C-CceEEEEccCCCHHHH
Confidence            4567899999999999999999999999999999999988 5444443332    2 2466788999987654

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.02  E-value=1.8e-09  Score=83.96  Aligned_cols=68  Identities=22%  Similarity=0.311  Sum_probs=54.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+++|+++||||++|||.++++.|+++|++|++++|++..++..+++.+. + ..+.+..+|+++.+++
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~i   78 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKE-G-RKVTFVQVDLTKPESA   78 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhc-C-CceEEEEcCCCCHHHH
Confidence            457899999999999999999999999999999999885455555555332 3 3467888999987764

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.02  E-value=1.8e-09  Score=83.45  Aligned_cols=67  Identities=22%  Similarity=0.389  Sum_probs=54.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++||||++|||+++++.|+++|++|++++|+ +.+++..+++... + ..+.+..+|+++.++.
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   69 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL-G-RRALAVPTDITDEDQC   69 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh-C-CceEEEecCCCCHHHH
Confidence            3678999999999999999999999999999999999 6666666666443 2 3467788999887653

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.02  E-value=1.5e-09  Score=85.80  Aligned_cols=68  Identities=18%  Similarity=0.273  Sum_probs=53.3

Q ss_pred             CCCCCCeEEEeCCC--ChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s--~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+++|+++||||+  +|||+++|+.|+++|++|++++|++...+..+++.++.+.  .....+|+++.+++
T Consensus         6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~--~~~~~~Dl~~~~~v   75 (272)
T PRK08159          6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGA--FVAGHCDVTDEASI   75 (272)
T ss_pred             ccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCC--ceEEecCCCCHHHH
Confidence            34688999999997  8999999999999999999998874445555566555443  44678999988764

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.02  E-value=2.3e-09  Score=83.99  Aligned_cols=69  Identities=32%  Similarity=0.419  Sum_probs=56.0

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++.+++|+++|||+++|||.++++.|++.|++|++++|+ +.+++..+++... +. .+.+..+|+++.+++
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~~~~~i   73 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA-GP-EGLGVSADVRDYAAV   73 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-CC-ceEEEECCCCCHHHH
Confidence            456889999999999999999999999999999999998 6666666666543 22 356778899987654

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.01  E-value=2.1e-09  Score=83.11  Aligned_cols=68  Identities=24%  Similarity=0.313  Sum_probs=56.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+++|+++|||+++|||.++++.|+++|++|++++|+ +.+++..+++.+. + ..+.+..+|+++.+++
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~i   71 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA-G-GEALFVACDVTRDAEV   71 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-C-CceEEEEcCCCCHHHH
Confidence            35789999999999999999999999999999999999 6667766666443 3 3477888999987653

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.01  E-value=1.9e-09  Score=83.85  Aligned_cols=67  Identities=18%  Similarity=0.218  Sum_probs=52.0

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++||+++||||++|||++++++|+++|++|++++|++ .++..+++.+ .+ ..+.+..+|+++.+++
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~-~~~~~~~~~~-~~-~~~~~~~~Dl~~~~~~   70 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE-APETQAQVEA-LG-RKFHFITADLIQQKDI   70 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch-HHHHHHHHHH-cC-CeEEEEEeCCCCHHHH
Confidence            357899999999999999999999999999999998872 2333344433 23 3567788999988764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.01  E-value=2.4e-09  Score=83.67  Aligned_cols=69  Identities=29%  Similarity=0.324  Sum_probs=57.2

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++++|+++|||+++|||.+++++|++.|++|++.+|+ +.+++..+++... + ..+.+..+|+++.+++
T Consensus         5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~   74 (265)
T PRK07097          5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL-G-IEAHGYVCDVTDEDGV   74 (265)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-C-CceEEEEcCCCCHHHH
Confidence            456799999999999999999999999999999999999 6677666666433 2 3477888999988764

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.01  E-value=6e-10  Score=85.60  Aligned_cols=63  Identities=37%  Similarity=0.529  Sum_probs=52.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.|.+++||||++|||+++|++|.+.|-+|++++|+ +.++++..+.      ..++..+||+.|.++.
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~------p~~~t~v~Dv~d~~~~   65 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN------PEIHTEVCDVADRDSR   65 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC------cchheeeecccchhhH
Confidence            4678999999999999999999999999999999999 6666654433      3467778899888754

>PRK06128 oxidoreductase; Provisional

Probab=99.01  E-value=6.1e-09  Score=83.21  Aligned_cols=69  Identities=25%  Similarity=0.263  Sum_probs=53.5

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-h--hHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-E--RVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~--~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +..++||+++||||++|||+++++.|+++|++|++.+++ +  ..++..+++... + ..+.+..+|+++.++.
T Consensus        50 ~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~v  121 (300)
T PRK06128         50 FGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE-G-RKAVALPGDLKDEAFC  121 (300)
T ss_pred             ccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc-C-CeEEEEecCCCCHHHH
Confidence            445889999999999999999999999999999998876 2  344455555433 3 3467788999987653

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.00  E-value=2.6e-09  Score=82.28  Aligned_cols=66  Identities=24%  Similarity=0.474  Sum_probs=55.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+++||||++|||++++++|++.|++|++.+|+ +.+++..+++....+...+.+..+|+++.++.
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   68 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQV   68 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHH
Confidence            6899999999999999999999999999999999 66777766666554445688889999988653

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=98.99  E-value=2.1e-09  Score=83.82  Aligned_cols=64  Identities=25%  Similarity=0.372  Sum_probs=50.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++||||++|||+++++.|+++|++|++++|+ +.+++..    ...+ ..+.+..+|+++.++.
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~----~~~~-~~~~~~~~D~~~~~~~   66 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELE----AAHG-DAVVGVEGDVRSLDDH   66 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----hhcC-CceEEEEeccCCHHHH
Confidence            4689999999999999999999999999999999998 5444432    2222 3466778899886543

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=98.99  E-value=2.4e-09  Score=83.84  Aligned_cols=67  Identities=21%  Similarity=0.244  Sum_probs=52.5

Q ss_pred             CCCCCeEEEeCCC--ChHHHHHHHHHHHCCCEEEEeecC-h--hHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRS-E--RVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s--~GIG~~~a~~La~~Ga~Vvi~~r~-~--~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++||+++|||++  +|||+++|++|++.|++|++.+++ +  +.++..+++.+...  .+.+..+|++|.+++
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~d~~~v   74 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLN--PSLFLPCDVQDDAQI   74 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccC--cceEeecCcCCHHHH
Confidence            4789999999986  899999999999999999998776 2  34555666654422  355678999998765

>PRK06196 oxidoreductase; Provisional

Probab=98.99  E-value=2.3e-09  Score=86.24  Aligned_cols=64  Identities=23%  Similarity=0.334  Sum_probs=52.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++.      .+.+..+|++|.+++
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~v   86 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLADLESV   86 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCCHHHH
Confidence            35789999999999999999999999999999999999 66666555552      156778899887654

>PRK07825 short chain dehydrogenase; Provisional

Probab=98.99  E-value=2.1e-09  Score=84.16  Aligned_cols=63  Identities=24%  Similarity=0.197  Sum_probs=51.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++||||++|||.++++.|+++|++|++.+|+ +.+++..+++.      .+.+..+|+++.++.
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~   65 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------LVVGGPLDVTDPASF   65 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEccCCCHHHH
Confidence            4678999999999999999999999999999999999 66555544442      356678899887653

>PRK06138 short chain dehydrogenase; Provisional

Probab=98.98  E-value=3.3e-09  Score=81.66  Aligned_cols=66  Identities=21%  Similarity=0.322  Sum_probs=54.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++||||++|||..+++.|++.|++|++++|+ +..++..+++.   ....+.+..+|++|.+++
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~   68 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAV   68 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHH
Confidence            4789999999999999999999999999999999999 66665555553   233577888999987654

>PRK12747 short chain dehydrogenase; Provisional

Probab=98.98  E-value=3e-09  Score=82.33  Aligned_cols=66  Identities=27%  Similarity=0.381  Sum_probs=52.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEee-cC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~-r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      ++++|+++||||++|||.+++++|++.|++|++.+ ++ +.+++...++... +. .+....+|+++.++
T Consensus         1 ~~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~   68 (252)
T PRK12747          1 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-GG-SAFSIGANLESLHG   68 (252)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc-CC-ceEEEecccCCHHH
Confidence            35789999999999999999999999999999875 44 6666666666543 22 35677889988764

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=98.98  E-value=3.9e-09  Score=81.65  Aligned_cols=67  Identities=19%  Similarity=0.282  Sum_probs=55.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++|||+++|||..+++.|+++|++|++++|+ +..++..+++.+. + ..+.+..+|+++.++.
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~   71 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA-G-GKAIGVAMDVTNEDAV   71 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc-C-ceEEEEECCCCCHHHH
Confidence            4679999999999999999999999999999999999 6677777777543 3 3467788999987654

>PRK08226 short chain dehydrogenase; Provisional

Probab=98.97  E-value=3.9e-09  Score=82.05  Aligned_cols=67  Identities=24%  Similarity=0.358  Sum_probs=53.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++||||++|||.++++.|+++|++|++++|++...+..+++... + ..+.+..+|+++.+++
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~v   69 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGR-G-HRCTAVVADVRDPASV   69 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHh-C-CceEEEECCCCCHHHH
Confidence            47889999999999999999999999999999999985455555555432 2 3467788999987654

>PRK07774 short chain dehydrogenase; Provisional

Probab=98.97  E-value=4e-09  Score=81.17  Aligned_cols=68  Identities=16%  Similarity=0.287  Sum_probs=54.3

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++|+++|||+++|||.++++.|++.|++|++++|+ +..++..+++... + ..+....+|+++.++.
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~   70 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD-G-GTAIAVQVDVSDPDSA   70 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEEcCCCCHHHH
Confidence            45788999999999999999999999999999999999 5555665665433 2 2356778899988653

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=98.97  E-value=3.4e-09  Score=82.21  Aligned_cols=65  Identities=25%  Similarity=0.313  Sum_probs=52.3

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+++|+++|||+++|||.++++.|+++|++|++++|+ +.+++..+++    + ..+.+..+|+++.++.
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~~   67 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI----G-PAAIAVSLDVTRQDSI   67 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh----C-CceEEEEccCCCHHHH
Confidence            35789999999999999999999999999999999999 5555554443    2 2366778899887654

>PRK08278 short chain dehydrogenase; Provisional

Probab=98.97  E-value=3.5e-09  Score=83.41  Aligned_cols=68  Identities=22%  Similarity=0.381  Sum_probs=53.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hh-------HHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ER-------VDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~-------~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++|+++||||++|||.++++.|+++|++|++++|+ +.       +++..+++... + ..+.+..+|+++.+++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~-~~~~~~~~D~~~~~~i   77 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA-G-GQALPLVGDVRDEDQV   77 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc-C-CceEEEEecCCCHHHH
Confidence            45789999999999999999999999999999999998 32       34444555432 2 3467788999988764

>PRK07814 short chain dehydrogenase; Provisional

Probab=98.97  E-value=4.1e-09  Score=82.33  Aligned_cols=67  Identities=27%  Similarity=0.454  Sum_probs=55.6

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++||||++|||.++++.|+++|++|++++|+ +.+++..+++... + ..+.+..+|+++.++.
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~   74 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA-G-RRAHVVAADLAHPEAT   74 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEEccCCCHHHH
Confidence            4789999999999999999999999999999999999 6666666666443 2 3467788999988764

>PRK05599 hypothetical protein; Provisional

Probab=98.97  E-value=2.9e-09  Score=82.74  Aligned_cols=63  Identities=27%  Similarity=0.428  Sum_probs=52.6

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |+++||||++|||+++++.|+ +|++|++++|+ +.++++.+++.+. +...+.+..+|++|.++.
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~d~~~v   64 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQR-GATSVHVLSFDAQDLDTH   64 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc-cCCceEEEEcccCCHHHH
Confidence            478999999999999999999 59999999999 7888888888654 333466788999988764

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=98.96  E-value=3.7e-09  Score=82.00  Aligned_cols=66  Identities=15%  Similarity=0.226  Sum_probs=54.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+++||||++|||.+++++|++.|++|++++|+ +.+++..+++....+...+.+..+|+++.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i   68 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSV   68 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHH
Confidence            6899999999999999999999999999999999 66666666665544434578888999987654

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.96  E-value=4.3e-09  Score=80.81  Aligned_cols=66  Identities=18%  Similarity=0.309  Sum_probs=54.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||.++++.|+++|++|++++|+ +..++...++..   ...+.+..+|+++.+++
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~   68 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADV   68 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHH
Confidence            4788999999999999999999999999999999999 666665555543   23477888999988764

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=98.96  E-value=4.9e-09  Score=81.43  Aligned_cols=69  Identities=22%  Similarity=0.276  Sum_probs=56.2

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..++++|+++||||++|||..+++.|+++|++|++++|+ +.++...+++...  ...+.+..+|++|.+++
T Consensus         7 ~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i   76 (259)
T PRK08213          7 LFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADI   76 (259)
T ss_pred             hhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHH
Confidence            446789999999999999999999999999999999999 6666666666432  23466788999987654

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.96  E-value=2.8e-09  Score=83.36  Aligned_cols=68  Identities=15%  Similarity=0.179  Sum_probs=50.4

Q ss_pred             CCCCCCeEEEeCC--CChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~--s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+++|+++|||+  ++|||+++++.|+++|++|++++|+.. ++..+++.++.+. .+.+..+|++|.+++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~-~~~~~~~~~~~~~-~~~~~~~Dv~~~~~i   72 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRA-LRLTERIAKRLPE-PAPVLELDVTNEEHL   72 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccc-hhHHHHHHHhcCC-CCcEEeCCCCCHHHH
Confidence            3478999999999  899999999999999999999987621 1222233333222 456778999988764

>PRK08628 short chain dehydrogenase; Provisional

Probab=98.95  E-value=4e-09  Score=81.80  Aligned_cols=67  Identities=21%  Similarity=0.203  Sum_probs=54.8

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++||+++||||++|||.++++.|++.|++|++++|+ +.. +..+++... +. .+.+..+|+++.++.
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~-~~-~~~~~~~D~~~~~~~   70 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL-QP-RAEFVQVDLTDDAQC   70 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc-CC-ceEEEEccCCCHHHH
Confidence            46899999999999999999999999999999999998 444 566666443 32 467888999987653

>PRK07904 short chain dehydrogenase; Provisional

Probab=98.95  E-value=4e-09  Score=82.40  Aligned_cols=66  Identities=24%  Similarity=0.385  Sum_probs=54.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC-hh-HHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-ER-VDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~-~~-~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      -.+|+++||||++|||+++|++|++.| ++|++++|+ +. +++..+++.+. +...+.+..+|++|.++
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~-~~~~v~~~~~D~~~~~~   74 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAA-GASSVEVIDFDALDTDS   74 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhc-CCCceEEEEecCCChHH
Confidence            467899999999999999999999995 899999999 54 77777777654 33357888899988765

>PRK09072 short chain dehydrogenase; Provisional

Probab=98.95  E-value=5.2e-09  Score=81.58  Aligned_cols=66  Identities=24%  Similarity=0.372  Sum_probs=54.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++||||++|||.++++.|+++|++|++++|+ +.+++...++ . . ...+.+..+|++|.++.
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-~-~~~~~~~~~D~~d~~~~   68 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-P-Y-PGRHRWVVADLTSEAGR   68 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-h-c-CCceEEEEccCCCHHHH
Confidence            4678999999999999999999999999999999999 6666666665 2 2 23577788999987653

>PRK07985 oxidoreductase; Provisional

Probab=98.94  E-value=7.4e-09  Score=82.73  Aligned_cols=69  Identities=22%  Similarity=0.267  Sum_probs=52.4

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC---hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS---ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~---~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.++++|+++||||++|||+++++.|+++|++|++.+++   +.++++.+.+. ..+ ..+.+..+|+++.+++
T Consensus        44 ~~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~Dl~~~~~~  115 (294)
T PRK07985         44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIE-ECG-RKAVLLPGDLSDEKFA  115 (294)
T ss_pred             CCccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHH-HcC-CeEEEEEccCCCHHHH
Confidence            345899999999999999999999999999999998875   23444443333 323 3466788999987654

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=98.94  E-value=6.2e-09  Score=80.79  Aligned_cols=68  Identities=21%  Similarity=0.305  Sum_probs=55.5

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+++|+++||||++|||..+++.|+++|++|++++|+ +.+++...++... +. .+.+..+|+++.+++
T Consensus         7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~D~~~~~~i   75 (255)
T PRK06113          7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GG-QAFACRCDITSEQEL   75 (255)
T ss_pred             cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHH
Confidence            35789999999999999999999999999999999998 6666666666443 32 466778999988764

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=98.94  E-value=5.7e-09  Score=80.43  Aligned_cols=67  Identities=24%  Similarity=0.308  Sum_probs=55.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++|||++++||.+++++|+++|++|++++|+ +.+++...++...  ...+.+..+|+++.++.
T Consensus         1 ~~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~   68 (258)
T PRK12429          1 MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAI   68 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHH
Confidence            3678999999999999999999999999999999999 6666666666543  23477788999987754

>PRK08643 acetoin reductase; Validated

Probab=98.94  E-value=5.7e-09  Score=80.80  Aligned_cols=64  Identities=25%  Similarity=0.405  Sum_probs=53.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+++||||++|||.++++.|+++|++|++++|+ +.+++...++... + ..+.+..+|+++.++.
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~   66 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD-G-GKAIAVKADVSDRDQV   66 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEEECCCCCHHHH
Confidence            6899999999999999999999999999999999 6677776666543 2 3567788999988753

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=98.93  E-value=4.6e-09  Score=81.74  Aligned_cols=64  Identities=22%  Similarity=0.324  Sum_probs=53.3

Q ss_pred             eEEEeCCCChHHHHHHHHHHH----CCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           82 NVLITGSTKGIGYALAKEFLK----AGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~----~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++|||+++|||++++++|++    .|++|++++|+ +.+++..+++....+...+.+..+|+++.++.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v   70 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGL   70 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHH
Confidence            689999999999999999997    79999999999 77788878876533344577788999987753

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=98.93  E-value=1.7e-09  Score=82.70  Aligned_cols=66  Identities=18%  Similarity=0.179  Sum_probs=54.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++..|+++||||++|||+++++.|++.|++|+++|++ +.++++...|...   ..-..+.||+++....
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~---~~h~aF~~DVS~a~~v   77 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY---GDHSAFSCDVSKAHDV   77 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC---CccceeeeccCcHHHH
Confidence            5778999999999999999999999999999999999 7777777777432   3356778899987543

>PRK06914 short chain dehydrogenase; Provisional

Probab=98.93  E-value=5.7e-09  Score=81.94  Aligned_cols=67  Identities=19%  Similarity=0.205  Sum_probs=53.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+|+++||||++|||..+++.|+++|++|++++|+ +.+++..+++........+.+..+|++|.++.
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~   69 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSI   69 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHH
Confidence            57899999999999999999999999999999998 66666555554332234577888999987654

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=98.93  E-value=4.2e-09  Score=84.95  Aligned_cols=65  Identities=25%  Similarity=0.346  Sum_probs=53.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+|+++|||+++|||+++++.|+++| ++|++++|+ +.+++..+++..  ....+.+..+|+++.+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v   68 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM--PKDSYTIMHLDLGSLDSV   68 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC--CCCeEEEEEcCCCCHHHH
Confidence            37899999999999999999999999 999999999 666666666642  233567788999988764

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK12939 short chain dehydrogenase; Provisional

Probab=98.93  E-value=7.5e-09  Score=79.42  Aligned_cols=68  Identities=21%  Similarity=0.268  Sum_probs=55.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++++|+++|||+++|||..+++.|+++|++|++++|+ +.+++..+++... + ..+.+..+|+++.++.
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~   71 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA-G-GRAHAIAADLADPASV   71 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEEccCCCHHHH
Confidence            35789999999999999999999999999999999998 6666666666543 2 3477788899887654

>PRK07677 short chain dehydrogenase; Provisional

Probab=98.93  E-value=5.8e-09  Score=80.82  Aligned_cols=64  Identities=28%  Similarity=0.403  Sum_probs=52.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ||+++||||++|||.++++.|+++|++|++++|+ +.+++..+++... + ..+.+..+|+++.++.
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   65 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF-P-GQVLTVQMDVRNPEDV   65 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEEecCCCHHHH
Confidence            5899999999999999999999999999999999 6666666666443 2 3577888999987654

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.92  E-value=5.6e-09  Score=81.91  Aligned_cols=67  Identities=24%  Similarity=0.341  Sum_probs=50.3

Q ss_pred             CCCCCeEEEeCC--CChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~--s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++||||  ++|||+++|++|+++|++|+++++.+..++..+++.++.+.  ..+..+|++|.+++
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Dv~d~~~v   71 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGS--DLVFPCDVASDEQI   71 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCC--cceeeccCCCHHHH
Confidence            368999999996  68999999999999999999987653333444455444333  23577899988764

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.92  E-value=9e-09  Score=78.94  Aligned_cols=67  Identities=28%  Similarity=0.390  Sum_probs=55.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++|||+++|||..++++|++.|++|++++|+ +.+++..+++... + ..+.+..+|+++.++.
T Consensus         4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   71 (239)
T PRK07666          4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY-G-VKVVIATADVSDYEEV   71 (239)
T ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-C-CeEEEEECCCCCHHHH
Confidence            4678999999999999999999999999999999999 6666666666432 2 3577788999887653

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=98.92  E-value=7.4e-09  Score=80.61  Aligned_cols=67  Identities=27%  Similarity=0.338  Sum_probs=54.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++||||++|||.++++.|+++|++|++++|+  +.+++..+++... + ..+.+..+|+++.+++
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~i   72 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA-G-GEAIAVKGDVTVESDV   72 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-C-CeEEEEEecCCCHHHH
Confidence            4789999999999999999999999999999998886  4455566666443 2 3567788999988764

>PRK05875 short chain dehydrogenase; Provisional

Probab=98.92  E-value=7.9e-09  Score=80.97  Aligned_cols=69  Identities=22%  Similarity=0.316  Sum_probs=55.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++|||+++|||..+++.|+++|++|++++|+ +.+++..+++....+...+.+..+|+++.++.
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~   73 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQV   73 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHH
Confidence            3678999999999999999999999999999999998 66666666664432223577778899887653

>PRK07102 short chain dehydrogenase; Provisional

Probab=98.92  E-value=7.2e-09  Score=79.75  Aligned_cols=65  Identities=26%  Similarity=0.390  Sum_probs=53.4

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+++||||++|||.+++++|++.|++|++++|+ +..++..+++... +...+.+..+|+++.++.
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~   66 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR-GAVAVSTHELDILDTASH   66 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh-cCCeEEEEecCCCChHHH
Confidence            3689999999999999999999999999999999 6666666666544 334678889999987653

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=98.91  E-value=8e-09  Score=91.61  Aligned_cols=71  Identities=18%  Similarity=0.310  Sum_probs=58.8

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ...+.+|+++||||++|||+++++.|+++|++|++++|+ +.+++..+++....+...+....+|+++.+++
T Consensus       409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v  480 (676)
T TIGR02632       409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAV  480 (676)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHH
Confidence            345789999999999999999999999999999999999 66777767776554444567788999988764

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=98.91  E-value=8.6e-09  Score=79.34  Aligned_cols=66  Identities=21%  Similarity=0.298  Sum_probs=51.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++||+++|||+++|||.+++++|+++|++|++++|++ ..+..+.+... + ..+.+..+|+++.++.
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~-~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   67 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE-PSETQQQVEAL-G-RRFLSLTADLSDIEAI   67 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHhc-C-CceEEEECCCCCHHHH
Confidence            47899999999999999999999999999999999873 23333444332 2 2467788999987764

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06949 short chain dehydrogenase; Provisional

Probab=98.91  E-value=1.1e-08  Score=79.05  Aligned_cols=67  Identities=24%  Similarity=0.310  Sum_probs=54.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++||||++|||.++++.|+++|++|++++|+ +.+++..+++....  ..+.+..+|+++.++.
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~   73 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEG--GAAHVVSLDVTDYQSI   73 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHH
Confidence            4789999999999999999999999999999999999 76677666664432  2466778898876653

>PRK06500 short chain dehydrogenase; Provisional

Probab=98.90  E-value=9.1e-09  Score=79.01  Aligned_cols=63  Identities=33%  Similarity=0.499  Sum_probs=49.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .+++|+++||||++|||.+++++|++.|++|++++|+ +.+++..+++    +. .+.+..+|+++.++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~   66 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL----GE-SALVIRADAGDVAA   66 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh----CC-ceEEEEecCCCHHH
Confidence            4678999999999999999999999999999999998 5444444333    32 45667788887654

>PRK12937 short chain dehydrogenase; Provisional

Probab=98.90  E-value=9.4e-09  Score=78.76  Aligned_cols=68  Identities=21%  Similarity=0.281  Sum_probs=53.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++|+++||||++|||..+++.|+++|++|++++++  +..++..+++... + ..+.+..+|+++.++.
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~   70 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA-G-GRAIAVQADVADAAAV   70 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc-C-CeEEEEECCCCCHHHH
Confidence            35789999999999999999999999999999988876  3445555555432 3 3577788999987654

>PRK07024 short chain dehydrogenase; Provisional

Probab=98.90  E-value=5.4e-09  Score=81.31  Aligned_cols=63  Identities=27%  Similarity=0.444  Sum_probs=51.2

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+++||||++|||.++++.|++.|++|++++|+ +.+++..+++...  . .+.+..+|+++.+++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i   65 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA--A-RVSVYAADVRDADAL   65 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC--C-eeEEEEcCCCCHHHH
Confidence            4789999999999999999999999999999999 6666655555322  1 577888999987654

>PRK07806 short chain dehydrogenase; Provisional

Probab=98.89  E-value=1.2e-08  Score=78.54  Aligned_cols=67  Identities=27%  Similarity=0.370  Sum_probs=52.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++|||+++|||.++++.|++.|++|++++|+  +.+++...++... + ..+.+..+|+++.++.
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~   71 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA-G-GRASAVGADLTDEESV   71 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc-C-CceEEEEcCCCCHHHH
Confidence            4678999999999999999999999999999999987  3445555555432 2 2466778899987754

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=98.89  E-value=8.4e-09  Score=74.77  Aligned_cols=63  Identities=32%  Similarity=0.418  Sum_probs=51.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC---hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS---ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~---~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |+++||||++|||++++++|+++|+ .|++++|+   +..++...++...  ...+.+..+|+++.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~   67 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESI   67 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc--ccccccccccccccccc
Confidence            6899999999999999999999976 67788887   5566666777633  36788889999988764

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=98.89  E-value=1.2e-08  Score=78.20  Aligned_cols=67  Identities=19%  Similarity=0.269  Sum_probs=54.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++.+|+++||||+++||.++++.|+++|++|++++|+ +.+.+..+++... + ..+.+..+|+++.++.
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~~   70 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA-G-GKARARQVDVRDRAAL   70 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEEECCCCCHHHH
Confidence            4678999999999999999999999999999999999 6666666666543 2 2477788899887653

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.89  E-value=1.3e-08  Score=78.13  Aligned_cols=67  Identities=21%  Similarity=0.267  Sum_probs=54.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++++++|||+++|||..+++.|+++|++|++++|+ +.+++..+++... + ..+.+..+|+++.++.
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   69 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL-G-TEVRGYAANVTDEEDV   69 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CceEEEEcCCCCHHHH
Confidence            4789999999999999999999999999999999999 6666666666543 2 3467778898886543

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.88  E-value=1.1e-08  Score=78.69  Aligned_cols=66  Identities=20%  Similarity=0.377  Sum_probs=52.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEE-eecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi-~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++|+++||||++|||+++++.|++.|++|++ .+|+ +.+++..+++... + ..+.+..+|+++.++.
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   69 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL-G-RKALAVKANVGDVEKI   69 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-C-CeEEEEEcCCCCHHHH
Confidence            56789999999999999999999999999876 4677 6666666666543 2 3567778999987753

>PRK12746 short chain dehydrogenase; Provisional

Probab=98.88  E-value=1.3e-08  Score=78.66  Aligned_cols=67  Identities=21%  Similarity=0.323  Sum_probs=52.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEe-ecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~-~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++|||+++|||.++++.|+++|++|++. .|+ +.+++...++...  ...+.+..+|++|.+++
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i   71 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGV   71 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHH
Confidence            4678999999999999999999999999999875 566 5555555555432  23467788999987754

>PRK06701 short chain dehydrogenase; Provisional

Probab=98.87  E-value=2.1e-08  Score=80.00  Aligned_cols=69  Identities=23%  Similarity=0.229  Sum_probs=53.5

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-h-hHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-E-RVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~-~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ...+++|+++|||+++|||.+++++|+++|++|++++|+ + .+++..+.+.. .+ ..+.+..+|+++.++.
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~-~~-~~~~~~~~Dl~~~~~~  111 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK-EG-VKCLLIPGDVSDEAFC  111 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh-cC-CeEEEEEccCCCHHHH
Confidence            356889999999999999999999999999999999998 3 34444444432 23 3567788999887653

>PRK08703 short chain dehydrogenase; Provisional

Probab=98.86  E-value=1.2e-08  Score=78.26  Aligned_cols=65  Identities=23%  Similarity=0.446  Sum_probs=51.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccc
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAA  141 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~  141 (147)
                      .++++|+++|||+++|||..+++.|++.|++|++++|+ +.+++..+++... +...+.+..+|+++
T Consensus         2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~   67 (239)
T PRK08703          2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEA-GHPEPFAIRFDLMS   67 (239)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHc-CCCCcceEEeeecc
Confidence            35789999999999999999999999999999999999 6677666666543 22234556677764

>PRK09135 pteridine reductase; Provisional

Probab=98.86  E-value=2e-08  Score=76.83  Aligned_cols=68  Identities=21%  Similarity=0.165  Sum_probs=52.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.+++++|||++++||..++++|++.|++|++++|+  +.+++..+++... ....+.+..+|+++.++.
T Consensus         3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~   72 (249)
T PRK09135          3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNAL-RPGSAAALQADLLDPDAL   72 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh-cCCceEEEEcCCCCHHHH
Confidence            3567899999999999999999999999999999987  3445444555433 223467788899987754

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.86  E-value=1.5e-08  Score=77.99  Aligned_cols=65  Identities=20%  Similarity=0.420  Sum_probs=49.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++|+++||||++|||.++++.|++.|++|++++++  +..++..    .+.+ ..+.+..+|+++.++.
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~----~~~~-~~~~~~~~D~~~~~~~   67 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALA----DELG-DRAIALQADVTDREQV   67 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH----HHhC-CceEEEEcCCCCHHHH
Confidence            35788999999999999999999999999999987665  3333322    2223 3467788999887653

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=98.85  E-value=1.1e-08  Score=79.56  Aligned_cols=61  Identities=38%  Similarity=0.621  Sum_probs=51.4

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++|||+++|||++++++|+++|++|++++|+ +.+++..+++... +  .+.+..+|++|.++.
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~--~~~~~~~Dv~d~~~~   63 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY-G--EVYAVKADLSDKDDL   63 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-C--CceEEEcCCCCHHHH
Confidence            68999999999999999999999999999999 7777777777543 2  467788999987654

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=98.85  E-value=1.7e-08  Score=77.52  Aligned_cols=66  Identities=18%  Similarity=0.252  Sum_probs=53.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++|+++||||+++||..++++|++.|++|++.+|+ +..++..+++...  ...+.+..+|+++.+++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~   67 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSV   67 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHH
Confidence            468999999999999999999999999999999999 6666666666443  23477788899887653

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=98.85  E-value=7.8e-09  Score=83.69  Aligned_cols=49  Identities=27%  Similarity=0.394  Sum_probs=42.4

Q ss_pred             CCCCCCCeEEEeCC--CChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHH
Q 032098           75 EPMLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLR  124 (147)
Q Consensus        75 ~~~l~gkv~vVTG~--s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~  124 (147)
                      .++++||+++|||+  ++|||+++|+.|+++|++|++ +|+ +++++...++.
T Consensus         4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~   55 (303)
T PLN02730          4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLR   55 (303)
T ss_pred             CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhh
Confidence            34589999999999  899999999999999999998 677 77777766664

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=98.85  E-value=1.8e-08  Score=78.30  Aligned_cols=68  Identities=15%  Similarity=0.183  Sum_probs=52.3

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++++||+++|||+++|||.+++++|++.|++|++.++.+ .++..+++... + ..+....+|+++.++.
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~-~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~   72 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE-PTETIEQVTAL-G-RRFLSLTADLRKIDGI   72 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc-hHHHHHHHHhc-C-CeEEEEECCCCCHHHH
Confidence            3468899999999999999999999999999999888762 23344445332 2 3467788899887654

>PRK06841 short chain dehydrogenase; Provisional

Probab=98.85  E-value=2e-08  Score=77.54  Aligned_cols=67  Identities=24%  Similarity=0.214  Sum_probs=52.0

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++++|+++||||++|||.++++.|+++|++|++++|++...+...++.    ...+.+..+|+++.+++
T Consensus        10 ~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~   76 (255)
T PRK06841         10 AFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLL----GGNAKGLVCDVSDSQSV   76 (255)
T ss_pred             hcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhh----CCceEEEEecCCCHHHH
Confidence            35688999999999999999999999999999999999843333333332    23455778899887654

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=98.85  E-value=2.1e-08  Score=77.15  Aligned_cols=67  Identities=27%  Similarity=0.401  Sum_probs=52.6

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++|||+++|||..++++|+++|++|++.+++  +..++..+++... + ..+.+..+|+++.++.
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~   71 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE-G-HDVYAVQADVSKVEDA   71 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc-C-CeEEEEECCCCCHHHH
Confidence            4678999999999999999999999999999887654  5555555566432 2 3577888999987654

>PRK12743 oxidoreductase; Provisional

Probab=98.85  E-value=1.7e-08  Score=78.48  Aligned_cols=64  Identities=22%  Similarity=0.242  Sum_probs=51.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+++||||++|||+++++.|+++|++|++++++  +.+++..+++... + ..+.+..+|+++.++.
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~   67 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH-G-VRAEIRQLDLSDLPEG   67 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-C-CceEEEEccCCCHHHH
Confidence            6899999999999999999999999999988765  5566666666443 2 3577888999987654

>PRK07326 short chain dehydrogenase; Provisional

Probab=98.84  E-value=1.9e-08  Score=76.80  Aligned_cols=66  Identities=29%  Similarity=0.383  Sum_probs=53.6

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.+++++||||+++||..++++|++.|++|++++|+ +.+.+..+++...   ..+.+..+|+.+.++.
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~   69 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADV   69 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHH
Confidence            3568999999999999999999999999999999999 6666666666433   3466778888877653

>PRK07856 short chain dehydrogenase; Provisional

Probab=98.84  E-value=1.3e-08  Score=78.87  Aligned_cols=61  Identities=28%  Similarity=0.402  Sum_probs=47.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++|+++||||++|||+++++.|+++|++|++++|++..     +   . ....+.+..+|+++.++.
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~---~-~~~~~~~~~~D~~~~~~~   62 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----T---V-DGRPAEFHAADVRDPDQV   62 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----h---h-cCCceEEEEccCCCHHHH
Confidence            35789999999999999999999999999999999998311     0   1 122456777888877653

>PRK07454 short chain dehydrogenase; Provisional

Probab=98.84  E-value=2.2e-08  Score=76.85  Aligned_cols=65  Identities=28%  Similarity=0.347  Sum_probs=52.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++|+++|||+++|||..++++|+++|++|++++|+ +..++..+++... + ..+.+..+|+++.++.
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   70 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST-G-VKAAAYSIDLSNPEAI   70 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC-C-CcEEEEEccCCCHHHH
Confidence            46899999999999999999999999999999999 6666666665432 2 3466778999987653

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.84  E-value=1.9e-08  Score=87.96  Aligned_cols=69  Identities=29%  Similarity=0.335  Sum_probs=57.6

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ...+++|+++||||++|||.++++.|+++|++|++++|+ +.+++..+++... + ..+.+..+|+++.++.
T Consensus       366 ~~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~~~~~  435 (657)
T PRK07201        366 RGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK-G-GTAHAYTCDLTDSAAV  435 (657)
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-C-CcEEEEEecCCCHHHH
Confidence            446889999999999999999999999999999999999 7777777777543 2 2477788999987654

>PRK06398 aldose dehydrogenase; Validated

Probab=98.83  E-value=9.4e-09  Score=80.27  Aligned_cols=37  Identities=30%  Similarity=0.433  Sum_probs=35.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +++||+++||||++|||+++++.|++.|++|++++|+
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~   39 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIK   39 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            5789999999999999999999999999999999987

>PRK09134 short chain dehydrogenase; Provisional

Probab=98.83  E-value=2.9e-08  Score=77.12  Aligned_cols=67  Identities=19%  Similarity=0.286  Sum_probs=52.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +..+|+++|||+++|||+.+++.|++.|++|++++++  +.++++..++...  ...+.+..+|++|.++.
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~   74 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEV   74 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHH
Confidence            4568899999999999999999999999999887765  4555555555433  23467788999987654

>PRK06484 short chain dehydrogenase; Validated

Probab=98.82  E-value=1.6e-08  Score=86.21  Aligned_cols=63  Identities=30%  Similarity=0.444  Sum_probs=51.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++|+++|||+++|||+++++.|+++|++|++++|+ +.+++..+++    + ..+.+..+|+++.++.
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~~   66 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL----G-PDHHALAMDVSDEAQI   66 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----C-CceeEEEeccCCHHHH
Confidence            578999999999999999999999999999999999 6666555444    2 2456778899987654

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=98.82  E-value=9.7e-09  Score=80.00  Aligned_cols=69  Identities=26%  Similarity=0.269  Sum_probs=57.8

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +++.||.+++||+.+|||++++++|+..|.++.+++-+++..+...+|.+..+...+.|.++||++..+
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~   69 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGD   69 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHH
Confidence            357899999999999999999999999999887776663335667778777788889999999998544

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=98.82  E-value=1.7e-08  Score=78.99  Aligned_cols=63  Identities=14%  Similarity=0.191  Sum_probs=49.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      ++++||||++|||+++++.|+++|++|++++++  +.+++..+++....+. .+.+..+|++|.++
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~d~~~   66 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPN-SAVTCQADLSNSAT   66 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCC-ceEEEEccCCCchh
Confidence            689999999999999999999999999998765  5666666666443333 45567889998764

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07832 short chain dehydrogenase; Provisional

Probab=98.82  E-value=1.9e-08  Score=78.96  Aligned_cols=64  Identities=19%  Similarity=0.246  Sum_probs=51.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |+++||||++|||+++++.|+++|++|++++|+ +.+++..+++... +...+.+..+|+++.++.
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~   65 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARAL-GGTVPEHRALDISDYDAV   65 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCCcceEEEeeCCCHHHH
Confidence            579999999999999999999999999999999 6677777777544 333455677899887653

>PRK06057 short chain dehydrogenase; Provisional

Probab=98.82  E-value=1.5e-08  Score=78.57  Aligned_cols=62  Identities=23%  Similarity=0.268  Sum_probs=48.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++||+++||||++|||.+++++|+++|++|++++|+ +.+++..+++    +.   .+..+|+++.+++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~----~~---~~~~~D~~~~~~~   66 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV----GG---LFVPTDVTDEDAV   66 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CC---cEEEeeCCCHHHH
Confidence            3789999999999999999999999999999999998 4444444333    11   3566788876653

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.81  E-value=2.8e-08  Score=77.40  Aligned_cols=68  Identities=21%  Similarity=0.255  Sum_probs=50.6

Q ss_pred             CCCCCCeEEEeCCC--ChHHHHHHHHHHHCCCEEEEeecC------------hhHHHHHHHHHHHhCCceEEEEeccccc
Q 032098           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRS------------ERVDSAVQSLREEFGEQHVCVTWQHSAA  141 (147)
Q Consensus        76 ~~l~gkv~vVTG~s--~GIG~~~a~~La~~Ga~Vvi~~r~------------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~  141 (147)
                      ..++||+++||||+  +|||.++|++|+++|++|+++++.            +.+.+..+++.+. + ..+.+..+|+++
T Consensus         2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g-~~~~~~~~D~~~   79 (256)
T PRK12859          2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN-G-VKVSSMELDLTQ   79 (256)
T ss_pred             CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc-C-CeEEEEEcCCCC
Confidence            35889999999998  499999999999999999987542            2223334444332 3 357778899998


Q ss_pred             hhhh
Q 032098          142 LSRH  145 (147)
Q Consensus       142 ~~~~  145 (147)
                      .+++
T Consensus        80 ~~~i   83 (256)
T PRK12859         80 NDAP   83 (256)
T ss_pred             HHHH
Confidence            8764

>PRK06484 short chain dehydrogenase; Validated

Probab=98.81  E-value=3.1e-08  Score=84.40  Aligned_cols=64  Identities=30%  Similarity=0.423  Sum_probs=51.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ...||+++||||++|||+++++.|+++|++|++++|+ +.++++.+++    +. .+....+|++|.++.
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~  330 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL----GD-EHLSVQADITDEAAV  330 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-ceeEEEccCCCHHHH
Confidence            4689999999999999999999999999999999998 5555554433    22 355678899988764

>PRK12828 short chain dehydrogenase; Provisional

Probab=98.81  E-value=2.3e-08  Score=75.94  Aligned_cols=65  Identities=18%  Similarity=0.189  Sum_probs=50.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +.+++|+++|||++++||..+++.|+++|++|++++|+ +...+..+++... +   ..+..+|+++.++
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~---~~~~~~D~~~~~~   68 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD-A---LRIGGIDLVDPQA   68 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc-C---ceEEEeecCCHHH
Confidence            35789999999999999999999999999999999998 5555555555332 2   3445577777654

>PRK06198 short chain dehydrogenase; Provisional

Probab=98.81  E-value=2.8e-08  Score=76.97  Aligned_cols=68  Identities=25%  Similarity=0.441  Sum_probs=54.1

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCE-EEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~-Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+++|+++|||+++|||..+++.|++.|++ |++++|+ +...+...++.+. + ..+.+..+|+++.++.
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~   71 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL-G-AKAVFVQADLSDVEDC   71 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc-C-CeEEEEEccCCCHHHH
Confidence            3578999999999999999999999999999 9999998 6666555566332 3 3466778899887653

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=98.81  E-value=3.5e-08  Score=75.15  Aligned_cols=66  Identities=26%  Similarity=0.374  Sum_probs=52.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      ++.+|+++|||++++||..+++.|+++|++|++++|+ +..++...++... + ..+.+..+|+++.++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~   68 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA-G-GEARVLVFDVSDEAA   68 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-C-CceEEEEccCCCHHH
Confidence            4567899999999999999999999999999999999 6666656665433 2 246677789988764

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=98.80  E-value=3.2e-08  Score=76.09  Aligned_cols=66  Identities=15%  Similarity=0.195  Sum_probs=49.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEee-cC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~-r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++|+++|||+++|||+.++++|+++|++|++.. ++ +..++..+++... + ..+.+..+|+++.++.
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   68 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL-G-FDFIASEGNVGDWDST   68 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc-C-CcEEEEEcCCCCHHHH
Confidence            4689999999999999999999999999988854 34 4445555555432 2 3466778899887654

>PRK05855 short chain dehydrogenase; Validated

Probab=98.80  E-value=2.8e-08  Score=84.75  Aligned_cols=68  Identities=18%  Similarity=0.245  Sum_probs=57.1

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+.+++++||||++|||.+++++|+++|++|++++|+ +.++++.+++... +. .+.+..+|++|.++.
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~~~~~~  379 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA-GA-VAHAYRVDVSDADAM  379 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-eEEEEEcCCCCHHHH
Confidence            45678999999999999999999999999999999999 7777777777544 32 577888999998764

>PRK12744 short chain dehydrogenase; Provisional

Probab=98.80  E-value=3.6e-08  Score=76.59  Aligned_cols=68  Identities=16%  Similarity=0.254  Sum_probs=51.0

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-----hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-----ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-----~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+++|+++|||+++|||.++++.|++.|++|++++++     +.+++..+++... + ..+.+..+|+++.+++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~   76 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA-G-AKAVAFQADLTTAAAV   76 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh-C-CcEEEEecCcCCHHHH
Confidence            35788999999999999999999999999997766543     3344444455332 2 3467788999988764

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.79  E-value=4.5e-08  Score=74.82  Aligned_cols=67  Identities=22%  Similarity=0.317  Sum_probs=54.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEe-ecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~-~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.+|+++||||++|||..+++.|++.|++|+++ +|+ +..++..+++...  ...+.+..+|+++.++.
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~   70 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDV   70 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHH
Confidence            4678999999999999999999999999999998 888 6666666665442  33577888999887653

>PRK05650 short chain dehydrogenase; Provisional

Probab=98.79  E-value=3.1e-08  Score=77.57  Aligned_cols=63  Identities=24%  Similarity=0.340  Sum_probs=52.2

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |+++||||++|||+++++.|+++|++|++.+|+ +.+++...++... + ..+.+..+|+++.++.
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~   64 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA-G-GDGFYQRCDVRDYSQL   64 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CceEEEEccCCCHHHH
Confidence            479999999999999999999999999999999 7777777777544 2 3467788899887653

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.79  E-value=3.9e-08  Score=75.11  Aligned_cols=66  Identities=27%  Similarity=0.377  Sum_probs=52.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++|||+++|||..+++.|++.|++|++++|+ +.+++..+++... +  .+.+..+|+++.++.
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~Dl~~~~~~   68 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-G--NIHYVVGDVSSTESA   68 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C--CeEEEECCCCCHHHH
Confidence            4678999999999999999999999999999999999 5555544444322 2  467778899887643

>PRK06940 short chain dehydrogenase; Provisional

Probab=98.78  E-value=3.3e-08  Score=78.14  Aligned_cols=62  Identities=27%  Similarity=0.415  Sum_probs=50.2

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+++|||+ +|||+++++.|+ +|++|++++|+ +.+++..+++... + ..+.+..+|++|.+++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~Dv~d~~~i   64 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA-G-FDVSTQEVDVSSRESV   64 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEEEeecCCHHHH
Confidence            579999998 699999999996 89999999999 6677766666443 2 3567788999988764

>PRK08267 short chain dehydrogenase; Provisional

Probab=98.78  E-value=3e-08  Score=77.04  Aligned_cols=61  Identities=20%  Similarity=0.167  Sum_probs=49.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |+++||||++|||.++++.|+++|++|++++|+ +.+++..+++.    ...+.+..+|+++.++.
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v   63 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG----AGNAWTGALDVTDRAAW   63 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHH
Confidence            789999999999999999999999999999999 55555544432    33577888999987654

>PRK06101 short chain dehydrogenase; Provisional

Probab=98.78  E-value=2.2e-08  Score=77.20  Aligned_cols=59  Identities=31%  Similarity=0.413  Sum_probs=46.6

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++||||++|||.++++.|+++|++|++++|+ +.+++.    ....  ..+.+..+|+++.++.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~----~~~~--~~~~~~~~D~~~~~~~   61 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDEL----HTQS--ANIFTLAFDVTDHPGT   61 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH----HHhc--CCCeEEEeeCCCHHHH
Confidence            689999999999999999999999999999998 444332    2221  2356778899887754

>PRK07775 short chain dehydrogenase; Provisional

Probab=98.77  E-value=5.9e-08  Score=76.39  Aligned_cols=67  Identities=24%  Similarity=0.290  Sum_probs=53.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++.|+++||||++|||.++++.|+++|++|++.+|+ +.+.+..+++... + ..+.+..+|+++.++.
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~   74 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD-G-GEAVAFPLDVTDPDSV   74 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEEECCCCCHHHH
Confidence            4677899999999999999999999999999999998 6666555555433 2 2467778899988764

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=98.77  E-value=5e-08  Score=74.59  Aligned_cols=64  Identities=22%  Similarity=0.294  Sum_probs=50.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++|||+++|||.+++++|+++|+.|++.+++ +.+++...++    + ..+.+..+|+++.++.
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~~   67 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL----G-ERVKIFPANLSDRDEV   67 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----C-CceEEEEccCCCHHHH
Confidence            5788999999999999999999999999999998888 5555444332    2 2456778898877653

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.76  E-value=6.5e-08  Score=74.40  Aligned_cols=68  Identities=24%  Similarity=0.347  Sum_probs=51.3

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++|+++||||++|||.+++++|+++|++|++..++  +...+....+.+. +. .+.+..+|+++.+++
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~   71 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN-GG-EGIGVLADVSTREGC   71 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc-CC-eeEEEEeccCCHHHH
Confidence            34678999999999999999999999999999887765  4444444454432 22 456778899887654

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.76  E-value=3.4e-08  Score=76.64  Aligned_cols=62  Identities=32%  Similarity=0.409  Sum_probs=47.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||.++++.|++.|++|++++++ +..   .+++...    .+.+..+|+++.++.
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~----~~~~~~~Dl~~~~~~   66 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK----GVFTIKCDVGNRDQV   66 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC----CCeEEEecCCCHHHH
Confidence            5789999999999999999999999999999988776 322   2233222    256678888887653

>PRK06180 short chain dehydrogenase; Provisional

Probab=98.76  E-value=3.6e-08  Score=77.65  Aligned_cols=63  Identities=24%  Similarity=0.236  Sum_probs=48.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+|+++||||++|||.+++++|++.|++|++++|+ +.+++    +.+.. ...+....+|+++.+++
T Consensus         2 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~----l~~~~-~~~~~~~~~D~~d~~~~   65 (277)
T PRK06180          2 SSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARAD----FEALH-PDRALARLLDVTDFDAI   65 (277)
T ss_pred             CCCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHH----HHhhc-CCCeeEEEccCCCHHHH
Confidence            357899999999999999999999999999999998 44433    22222 22466778899887764

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=98.76  E-value=6e-08  Score=73.93  Aligned_cols=67  Identities=24%  Similarity=0.298  Sum_probs=51.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-h-hHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-E-RVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~-~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++|||++++||.++++.|++.|++|++..++ + ..++..+++...  ...+.+..+|+++.++.
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~   70 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESV   70 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHH
Confidence            4678999999999999999999999999999888887 3 344555555332  23567777899887653

>PRK12742 oxidoreductase; Provisional

Probab=98.76  E-value=4.2e-08  Score=74.89  Aligned_cols=61  Identities=26%  Similarity=0.425  Sum_probs=45.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .+++|+++||||++|||+++++.|+++|++|++.+++  +.+++    +..+.+   +.+..+|+++.++
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~----l~~~~~---~~~~~~D~~~~~~   65 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAER----LAQETG---ATAVQTDSADRDA   65 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHH----HHHHhC---CeEEecCCCCHHH
Confidence            4779999999999999999999999999999988765  33333    323322   2355678877654

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=98.76  E-value=6.2e-08  Score=74.67  Aligned_cols=67  Identities=22%  Similarity=0.400  Sum_probs=49.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hh--HHHHHHHHHHHhCCceEEEEeccccc-hhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ER--VDSAVQSLREEFGEQHVCVTWQHSAA-LSR  144 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~--~~~~~~~l~~~~~~~~v~~~~~Dvs~-~~~  144 (147)
                      ++.+|+++|||+++|||+++|+.|++.|++|+++.++ +.  .++..+... ..+...+.+..+|+++ .++
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~~   72 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEES   72 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHHH
Confidence            5789999999999999999999999999998888887 43  333333333 1111357777899997 554

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=98.75  E-value=2e-08  Score=78.24  Aligned_cols=58  Identities=22%  Similarity=0.301  Sum_probs=45.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      ..+++|+++|||+++|||+++++.|+++|++|++++++ +.++           ...+.+..+|+++.++
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~   63 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEE   63 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHH
Confidence            45789999999999999999999999999999999987 3221           1135566677777654

>TIGR02415 23BDH acetoin reductases

Probab=98.74  E-value=5e-08  Score=75.24  Aligned_cols=63  Identities=17%  Similarity=0.263  Sum_probs=52.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |+++|||+++|||..+++.|++.|++|++++|+ +.+++..+++...  ...+.+..+|+++.+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i   64 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQV   64 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHH
Confidence            689999999999999999999999999999999 6666666666533  33577888999988764

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.74  E-value=5.6e-08  Score=75.01  Aligned_cols=64  Identities=33%  Similarity=0.431  Sum_probs=49.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .|+++|||+++|||.++++.|+++|++|++++|+  +..++..+++... + ..+.+..+|+++.++.
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   67 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL-G-VEVIFFPADVADLSAH   67 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc-C-CceEEEEecCCCHHHH
Confidence            4799999999999999999999999999999987  3444445555332 2 3467778999987653

>PRK05993 short chain dehydrogenase; Provisional

Probab=98.74  E-value=3.8e-08  Score=77.60  Aligned_cols=58  Identities=28%  Similarity=0.285  Sum_probs=46.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .+|+++||||++|||.++++.|++.|++|++++|+ +.+++    +...    .+.+..+|++|.++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~----l~~~----~~~~~~~Dl~d~~~   61 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAA----LEAE----GLEAFQLDYAEPES   61 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH----HHHC----CceEEEccCCCHHH
Confidence            46899999999999999999999999999999998 54433    2221    24567788888764

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=98.74  E-value=5.2e-08  Score=75.15  Aligned_cols=64  Identities=22%  Similarity=0.397  Sum_probs=50.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEecccc
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSA  140 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs  140 (147)
                      ..+++|+++|||+++|||..+++.|++.|++|++++|+ +.+++..+++.+. +...+.+..+|++
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~d~~   72 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAA-GGPQPAIIPLDLL   72 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhc-CCCCceEEEeccc
Confidence            35789999999999999999999999999999999999 7677776777544 3223445555664

>PRK07074 short chain dehydrogenase; Provisional

Probab=98.74  E-value=5.7e-08  Score=75.24  Aligned_cols=62  Identities=26%  Similarity=0.357  Sum_probs=50.6

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+++||||++|||..++..|++.|++|++++|+ +.+++..+++.    ...+.+..+|+.+.++.
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~   64 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG----DARFVPVACDLTDAASL   64 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHH
Confidence            5799999999999999999999999999999998 66665555552    23467788899887754

>PRK06182 short chain dehydrogenase; Validated

Probab=98.74  E-value=3.4e-08  Score=77.46  Aligned_cols=59  Identities=22%  Similarity=0.249  Sum_probs=46.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++|+++|||+++|||++++++|+++|++|++++|+ +.+++    +...    .+.+..+|+++.++.
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~----~~~~----~~~~~~~Dv~~~~~~   61 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMED----LASL----GVHPLSLDVTDEASI   61 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHhC----CCeEEEeeCCCHHHH
Confidence            57899999999999999999999999999999998 44433    2211    255677888887653

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.74  E-value=3e-08  Score=78.55  Aligned_cols=67  Identities=19%  Similarity=0.358  Sum_probs=57.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCC-----EEEEeecC-hhHHHHHHHHHHHhC--CceEEEEeccccchhhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGD-----NVIICSRS-ERVDSAVQSLREEFG--EQHVCVTWQHSAALSRHY  146 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga-----~Vvi~~r~-~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~~~  146 (147)
                      .|+++|||+++|||+++|.+|++..-     +|++.+|+ +++++++..|.+-++  ...+.+..+|++++.+.+
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~   77 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVF   77 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHH
Confidence            58999999999999999999998753     37788999 999999999988777  346788899999988765

>PRK06181 short chain dehydrogenase; Provisional

Probab=98.72  E-value=7.1e-08  Score=74.93  Aligned_cols=63  Identities=30%  Similarity=0.457  Sum_probs=51.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +++++||||++|||..+++.|++.|++|++++|+ +..++..+++... + ..+.+..+|+++.++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~   64 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH-G-GEALVVPTDVSDAEA   64 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEEccCCCHHH
Confidence            4789999999999999999999999999999999 6666666666543 3 356777889988765

>PRK12829 short chain dehydrogenase; Provisional

Probab=98.72  E-value=5.5e-08  Score=75.28  Aligned_cols=65  Identities=31%  Similarity=0.438  Sum_probs=50.8

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .++++|+++||||++|||..+++.|+++|++|++++|+ +.+++..+++    +...+.+..+|+++.++
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~   72 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARL----PGAKVTATVADVADPAQ   72 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----hcCceEEEEccCCCHHH
Confidence            45789999999999999999999999999999999998 4444433333    22245677888887764

>PRK08264 short chain dehydrogenase; Validated

Probab=98.72  E-value=5.5e-08  Score=74.38  Aligned_cols=61  Identities=25%  Similarity=0.327  Sum_probs=48.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+.+|+++||||++|||.++++.|++.|+ +|++++|+ +++++        . ...+.+..+|+++.++.
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------~-~~~~~~~~~D~~~~~~~   64 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------L-GPRVVPLQLDVTDPASV   64 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------c-CCceEEEEecCCCHHHH
Confidence            457889999999999999999999999999 99999998 43332        1 22466778888887653

>PRK06523 short chain dehydrogenase; Provisional

Probab=98.71  E-value=5.6e-08  Score=75.39  Aligned_cols=60  Identities=30%  Similarity=0.327  Sum_probs=47.0

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..++||+++||||++|||.+++++|+++|++|++++|++..     .+     ...+.+..+|+++.++.
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~-----~~-----~~~~~~~~~D~~~~~~~   64 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD-----DL-----PEGVEFVAADLTTAEGC   64 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhh-----hc-----CCceeEEecCCCCHHHH
Confidence            35789999999999999999999999999999999998211     00     12356677788877643

>PRK12827 short chain dehydrogenase; Provisional

Probab=98.70  E-value=9.6e-08  Score=73.08  Aligned_cols=67  Identities=21%  Similarity=0.277  Sum_probs=49.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-----hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-----ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-----~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++||||++|||..+++.|+++|++|+++++.     +..++..+++...  ...+.+..+|+++.++.
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~   74 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAAT   74 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHH
Confidence            4678899999999999999999999999999997764     2333333344322  23567788999887653

>PRK09291 short chain dehydrogenase; Provisional

Probab=98.70  E-value=8.4e-08  Score=74.08  Aligned_cols=64  Identities=22%  Similarity=0.258  Sum_probs=49.4

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+++||||++|||..+++.|++.|++|++++|+ +.+++..+..... +. .+.+..+|+++.++.
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~   66 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR-GL-ALRVEKLDLTDAIDR   66 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cceEEEeeCCCHHHH
Confidence            5789999999999999999999999999999998 5555544443322 22 366777888887643

>PRK07069 short chain dehydrogenase; Validated

Probab=98.70  E-value=8.4e-08  Score=73.72  Aligned_cols=63  Identities=21%  Similarity=0.363  Sum_probs=49.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++||||++|||..+++.|+++|++|++++|+  +.+++..+++....+...+.+..+|+++.++.
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   66 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQW   66 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHH
Confidence            7999999999999999999999999999997  44555555555443334456677899887653

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=98.70  E-value=9.2e-08  Score=73.59  Aligned_cols=64  Identities=28%  Similarity=0.302  Sum_probs=49.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeec-C-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-S-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r-~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .|+++||||++|||..+++.|+++|++|+++++ + +.+++..+++... + ..+.+..+|+++.+++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~   67 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA-G-GRACVVAGDVANEADV   67 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-C-CcEEEEEeccCCHHHH
Confidence            368999999999999999999999999988764 4 5566666666432 3 3477888999887654

>PRK08263 short chain dehydrogenase; Provisional

Probab=98.70  E-value=8.1e-08  Score=75.46  Aligned_cols=62  Identities=19%  Similarity=0.300  Sum_probs=48.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+|+++||||++|||..++++|+++|++|++++|+ +.+++..+.    .+ ..+.+..+|+++.++.
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~D~~~~~~~   64 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEK----YG-DRLLPLALDVTDRAAV   64 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh----cc-CCeeEEEccCCCHHHH
Confidence            46899999999999999999999999999999998 555443322    22 2356778899887664

>PRK06483 dihydromonapterin reductase; Provisional

Probab=98.68  E-value=6e-08  Score=74.30  Aligned_cols=59  Identities=31%  Similarity=0.423  Sum_probs=45.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+++||||++|||+++++.|+++|++|++++|+ +..   .+++... +   +.+..+|+++.++.
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~-~---~~~~~~D~~~~~~~   61 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPA---IDGLRQA-G---AQCIQADFSTNAGI   61 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhH---HHHHHHc-C---CEEEEcCCCCHHHH
Confidence            5799999999999999999999999999999998 432   2333221 2   35667888877653

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=98.67  E-value=1.2e-07  Score=72.83  Aligned_cols=63  Identities=24%  Similarity=0.342  Sum_probs=50.6

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +|+++|||++++||..+++.|+++|++|++++|+ +..++..+++... + ..+.+..+|+.+.++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~   64 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA-G-GSVIYLVADVTKEDE   64 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CceEEEECCCCCHHH
Confidence            4789999999999999999999999999999999 5555555555332 2 357778889988763

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06123 short chain dehydrogenase; Provisional

Probab=98.67  E-value=1.2e-07  Score=72.85  Aligned_cols=64  Identities=23%  Similarity=0.273  Sum_probs=48.7

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+++|||+++|||.+++++|+++|++|++.+++  +..++..+++... + ..+.+..+|+++.++.
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~~   67 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ-G-GEALAVAADVADEADV   67 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC-C-CcEEEEEeccCCHHHH
Confidence            5789999999999999999999999999888755  4444444555332 2 2456778899987654

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.67  E-value=1.4e-07  Score=73.29  Aligned_cols=67  Identities=16%  Similarity=0.142  Sum_probs=49.5

Q ss_pred             CCCCCeEEEeCCCC--hHHHHHHHHHHHCCCEEEEeecC------------hhHHHHHHHHHHHhCCceEEEEeccccch
Q 032098           77 MLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRS------------ERVDSAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        77 ~l~gkv~vVTG~s~--GIG~~~a~~La~~Ga~Vvi~~r~------------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      .+++|+++|||+++  |||..+++.|++.|++|++.+|+            +...+..+++... + ..+.+..+|+++.
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~   79 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY-G-VRCEHMEIDLSQP   79 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc-C-CeEEEEECCCCCH
Confidence            46789999999994  99999999999999999999886            1111123333222 2 3477788999987


Q ss_pred             hhh
Q 032098          143 SRH  145 (147)
Q Consensus       143 ~~~  145 (147)
                      ++.
T Consensus        80 ~~~   82 (256)
T PRK12748         80 YAP   82 (256)
T ss_pred             HHH
Confidence            754

>PRK06179 short chain dehydrogenase; Provisional

Probab=98.67  E-value=5e-08  Score=76.19  Aligned_cols=58  Identities=26%  Similarity=0.236  Sum_probs=45.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++|+++||||++|||.+++++|+++|++|++.+|+ +.++.          ...+.+..+|++|.++.
T Consensus         2 ~~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~   60 (270)
T PRK06179          2 SNSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASV   60 (270)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHH
Confidence            357899999999999999999999999999999998 32211          11355677788877653

>PRK12367 short chain dehydrogenase; Provisional

Probab=98.67  E-value=7.8e-08  Score=75.27  Aligned_cols=62  Identities=23%  Similarity=0.175  Sum_probs=46.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecCh-hHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~-~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      ..+++|+++||||++|||.+++++|+++|++|++++|++ ...+   +. .. ..  ..+..+|+++.++
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~~-~~--~~~~~~D~~~~~~   72 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-DE-SP--NEWIKWECGKEES   72 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-cc-CC--CeEEEeeCCCHHH
Confidence            457899999999999999999999999999999999983 2111   11 11 11  1455778887764

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=98.65  E-value=3e-07  Score=80.12  Aligned_cols=71  Identities=23%  Similarity=0.210  Sum_probs=54.7

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHh----C---CceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEF----G---EQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~----~---~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+.+||+++||||++|||+.++++|++.|++|++++|+ +.+++..+++....    +   ...+.+..+|+.+.+++
T Consensus        75 ~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI  153 (576)
T PLN03209         75 LDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQI  153 (576)
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHH
Confidence            345688999999999999999999999999999999999 66666655553210    1   12467788899887653

>PRK07060 short chain dehydrogenase; Provisional

Probab=98.64  E-value=1.7e-07  Score=71.74  Aligned_cols=62  Identities=24%  Similarity=0.281  Sum_probs=47.3

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +++++|+++|||+++|||..+++.|++.|++|++++|+ +.+++..    +..+   ..+..+|+++.++
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~----~~~~---~~~~~~D~~~~~~   67 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLA----GETG---CEPLRLDVGDDAA   67 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HHhC---CeEEEecCCCHHH
Confidence            35789999999999999999999999999999999998 5444332    2222   2345677777653

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.64  E-value=2.3e-07  Score=70.59  Aligned_cols=67  Identities=24%  Similarity=0.366  Sum_probs=49.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.+|+++||||+++||..++..|++.|++|++..++  +..+....++... + ..+.+..+|+++.++.
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~v   71 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL-G-RRAQAVQADVTDKAAL   71 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-C-CceEEEECCcCCHHHH
Confidence            3567899999999999999999999999998887776  3333344444332 2 3467788999887653

>PRK08324 short chain dehydrogenase; Validated

Probab=98.63  E-value=1.4e-07  Score=83.70  Aligned_cols=67  Identities=22%  Similarity=0.227  Sum_probs=54.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+.||+++||||++|||+.+++.|++.|++|++++|+ +.+++..+++...   ..+.+..+|+++.+++
T Consensus       418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v  485 (681)
T PRK08324        418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAV  485 (681)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHH
Confidence            35789999999999999999999999999999999999 6666666555432   3467788899887654

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=98.63  E-value=2e-07  Score=71.09  Aligned_cols=62  Identities=23%  Similarity=0.247  Sum_probs=48.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeec-C-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSR-S-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r-~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |+++|||+++|||..+++.|++.|++|+++.| + +.+++..+++...  ...+.+..+|+++.++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~   64 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFES   64 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHH
Confidence            68999999999999999999999999999888 4 4455544444332  2347778889988765

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06924 short chain dehydrogenase; Provisional

Probab=98.63  E-value=1.1e-07  Score=73.29  Aligned_cols=62  Identities=27%  Similarity=0.469  Sum_probs=46.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |+++||||++|||.+++++|+++|++|++++|++.  +..+++.+..+ ..+.+..+|+++.++.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~--~~~~~~~~~~~-~~~~~~~~D~~~~~~~   63 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTEN--KELTKLAEQYN-SNLTFHSLDLQDVHEL   63 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCch--HHHHHHHhccC-CceEEEEecCCCHHHH
Confidence            68999999999999999999999999999999831  11222322222 2466778899887653

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=98.63  E-value=1.5e-07  Score=72.00  Aligned_cols=61  Identities=25%  Similarity=0.378  Sum_probs=49.0

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++|||+++|||..+++.|+++|++|+++++.  +.+++..+++... + ..+.+..+|+++.++.
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~~   63 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ-G-GNARLLQFDVADRVAC   63 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-C-CeEEEEEccCCCHHHH
Confidence            5899999999999999999999999998876  4556666666543 2 3577888999988764

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PLN00015 protochlorophyllide reductase

Probab=98.62  E-value=9.4e-08  Score=76.76  Aligned_cols=60  Identities=27%  Similarity=0.391  Sum_probs=48.5

Q ss_pred             EEeCCCChHHHHHHHHHHHCC-CEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           84 LITGSTKGIGYALAKEFLKAG-DNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        84 vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +||||++|||+++++.|+++| ++|++++|+ +.+++..+++...  ...+.+..+|+++.++.
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v   62 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP--KDSYTVMHLDLASLDSV   62 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEecCCCHHHH
Confidence            599999999999999999999 999999999 6666666665322  23567778999988764

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=98.61  E-value=2.1e-07  Score=72.04  Aligned_cols=60  Identities=27%  Similarity=0.477  Sum_probs=47.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|||+++|||.++++.|+++|++|++++|+ +.+++...++    + ..+.+..+|+++.+++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dl~~~~~i   61 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----G-DNLYIAQLDVRNRAAI   61 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----c-cceEEEEecCCCHHHH
Confidence            368999999999999999999999999999999 5554443332    2 2466778899887654

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=98.59  E-value=2.8e-07  Score=70.54  Aligned_cols=63  Identities=21%  Similarity=0.277  Sum_probs=49.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEe-ecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~-~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |+++||||++|||.+++++|+++|++|++. .|+ +..++...++... + ..+.+..+|++|.+++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~d~~~i   66 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA-G-GKAFVLQADISDENQV   66 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC-C-CeEEEEEccCCCHHHH
Confidence            689999999999999999999999999875 455 5556666666443 2 2467788999987654

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=98.58  E-value=2.5e-07  Score=77.79  Aligned_cols=64  Identities=20%  Similarity=0.260  Sum_probs=48.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      ..++||+++||||++|||.+++++|+++|++|++++|+ +++++.   +... . ..+....+|++|.++
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~-~-~~v~~v~~Dvsd~~~  238 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGE-D-LPVKTLHWQVGQEAA  238 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---Hhhc-C-CCeEEEEeeCCCHHH
Confidence            35789999999999999999999999999999999998 444322   2111 1 124566778887765

>PRK06482 short chain dehydrogenase; Provisional

Probab=98.57  E-value=2.8e-07  Score=72.23  Aligned_cols=61  Identities=21%  Similarity=0.372  Sum_probs=47.6

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .|+++||||++|||..++++|++.|++|++++|+ +.+++..    +..+ ..+.+..+|+++.++.
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~----~~~~-~~~~~~~~D~~~~~~~   63 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLK----ARYG-DRLWVLQLDVTDSAAV   63 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hhcc-CceEEEEccCCCHHHH
Confidence            3789999999999999999999999999999998 4444332    2222 2467788899987653

>PRK05884 short chain dehydrogenase; Provisional

Probab=98.57  E-value=1.9e-07  Score=71.59  Aligned_cols=57  Identities=21%  Similarity=0.355  Sum_probs=44.9

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++||||++|||+++++.|+++|++|++.+|+ +++++..+++    +   +.+..+|+++.++.
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~----~---~~~~~~D~~~~~~v   59 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL----D---VDAIVCDNTDPASL   59 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----c---CcEEecCCCCHHHH
Confidence            48999999999999999999999999999999 6555544433    1   34567888877653

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.57  E-value=1.7e-07  Score=70.82  Aligned_cols=65  Identities=26%  Similarity=0.299  Sum_probs=53.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRHY  146 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~~  146 (147)
                      ++.|+++++||++.|||+++++.|++.|++|+.+.|+ +.+..++++    .+ ..+.-...|+++++..+
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e----~p-~~I~Pi~~Dls~wea~~   69 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKE----TP-SLIIPIVGDLSAWEALF   69 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhh----CC-cceeeeEecccHHHHHH
Confidence            5789999999999999999999999999999999999 666655543    22 34677788999887654

>PRK05693 short chain dehydrogenase; Provisional

Probab=98.55  E-value=2.2e-07  Score=72.89  Aligned_cols=56  Identities=36%  Similarity=0.419  Sum_probs=43.5

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |+++||||++|||.++++.|+++|++|++++|+ +.+++    +... +   +.+..+|+++.++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~----~~~~-~---~~~~~~Dl~~~~~   58 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA----LAAA-G---FTAVQLDVNDGAA   58 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHC-C---CeEEEeeCCCHHH
Confidence            789999999999999999999999999999998 44332    2221 1   3456778887654

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.55  E-value=1.9e-07  Score=70.49  Aligned_cols=64  Identities=22%  Similarity=0.272  Sum_probs=53.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+|-+++||||.+|+|++.+++|+++|+.|++.|.. ...++..++|    ++ .+.+...|+++++..
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel----g~-~~vf~padvtsekdv   70 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL----GG-KVVFTPADVTSEKDV   70 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh----CC-ceEEeccccCcHHHH
Confidence            4678899999999999999999999999999999999 6777777666    33 466777788877653

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=98.55  E-value=4.2e-07  Score=69.49  Aligned_cols=63  Identities=25%  Similarity=0.272  Sum_probs=47.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-h-hHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-E-RVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~-~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |+++|||+++|||..+++.|+++|++|++++|+ + ...+..+++..  ....+.+..+|+++.+++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v   67 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF--TEDQVRLKELDVTDTEEC   67 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc--cCCeEEEEEcCCCCHHHH
Confidence            689999999999999999999999999999998 3 22222222211  123577888999987654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=98.53  E-value=4.2e-07  Score=69.97  Aligned_cols=59  Identities=27%  Similarity=0.368  Sum_probs=45.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +++++|+++|||+++|||..++++|+++|++|++++|+.        +...  ...+.+..+|+++.++
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~--------~~~~--~~~~~~~~~D~~~~~~   62 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF--------LTQE--DYPFATFVLDVSDAAA   62 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch--------hhhc--CCceEEEEecCCCHHH
Confidence            457899999999999999999999999999999998874        1111  1235556677766554

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=98.50  E-value=4.7e-07  Score=72.68  Aligned_cols=65  Identities=15%  Similarity=0.037  Sum_probs=47.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhC-CceEEEEeccccchhh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG-EQHVCVTWQHSAALSR  144 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~  144 (147)
                      ++|+++||||+++||..++++|+++|++|++++|+ +..++.. .+....+ ...+.+...|+++.++
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~   70 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTD-HLLALDGAKERLKLFKADLLDEGS   70 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHH-HHHhccCCCCceEEEeCCCCCchH
Confidence            47899999999999999999999999999998888 4443332 2211111 2346677888887654

>PRK07041 short chain dehydrogenase; Provisional

Probab=98.50  E-value=4.7e-07  Score=68.87  Aligned_cols=59  Identities=32%  Similarity=0.449  Sum_probs=47.2

Q ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           84 LITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        84 vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|||+++|||.++++.|+++|++|++++|+ +.+++..+++. .  ...+.+..+|+++.++.
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~--~~~~~~~~~Dl~~~~~~   60 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALG-G--GAPVRTAALDITDEAAV   60 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-c--CCceEEEEccCCCHHHH
Confidence            599999999999999999999999999999 66665555553 1  23466778899987654

>PRK08177 short chain dehydrogenase; Provisional

Probab=98.47  E-value=4.6e-07  Score=69.09  Aligned_cols=58  Identities=22%  Similarity=0.312  Sum_probs=44.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |+++|||+++|||.++++.|++.|++|++++|+ +..++. +++    +  .+.+..+|++|.+++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~----~--~~~~~~~D~~d~~~~   60 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QAL----P--GVHIEKLDMNDPASL   60 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-Hhc----c--ccceEEcCCCCHHHH
Confidence            689999999999999999999999999999999 443322 221    1  245567788887654

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.47  E-value=3.1e-07  Score=74.19  Aligned_cols=38  Identities=24%  Similarity=0.409  Sum_probs=34.7

Q ss_pred             CCCCCCeEEEeCCC--ChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s--~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..++||+++|||++  +|||+++|+.|+++|++|++.++.
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~   43 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV   43 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence            46799999999996  999999999999999999998754

>PLN02583 cinnamoyl-CoA reductase

Probab=98.43  E-value=1.6e-06  Score=69.22  Aligned_cols=66  Identities=17%  Similarity=0.200  Sum_probs=47.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-h--hHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-E--RVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~--~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +-++|+++||||+++||..++++|+++|++|++++|+ +  ...+...++...  ...+.+...|++|.++
T Consensus         3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~   71 (297)
T PLN02583          3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYHS   71 (297)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHHH
Confidence            3457899999999999999999999999999999986 2  222223333211  2246667789888765

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=98.42  E-value=1.3e-06  Score=70.76  Aligned_cols=64  Identities=22%  Similarity=0.211  Sum_probs=48.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCC--CEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++||+++||||+++||..+++.|++.|  ++|++.+|+ ....+...++    ....+.+..+|++|.++.
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~l   68 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----PAPCLRFFIGDVRDKERL   68 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----CCCcEEEEEccCCCHHHH
Confidence            578999999999999999999999986  789999987 3332222222    223467788899987654

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.41  E-value=8.4e-07  Score=71.94  Aligned_cols=65  Identities=28%  Similarity=0.326  Sum_probs=56.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.++||||++|||+++|.++..+|++|.++.|+ +++.++..+|.-..+...+.+.-+|+.|.++.
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v   99 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSV   99 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHH
Confidence            689999999999999999999999999999999 88999999887766555577888898777654

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.41  E-value=6.8e-07  Score=68.22  Aligned_cols=37  Identities=38%  Similarity=0.546  Sum_probs=35.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+++|+++|||+++|||.++++.|+++|++|++++|+
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~   38 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQ   38 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            4788999999999999999999999999999999987

>PRK08017 oxidoreductase; Provisional

Probab=98.41  E-value=9e-07  Score=68.26  Aligned_cols=56  Identities=27%  Similarity=0.360  Sum_probs=43.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |+++|||+++|||.++++.|+++|++|++++|+ +.++..    .. .+   +....+|+++.++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~----~~-~~---~~~~~~D~~~~~~   59 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NS-LG---FTGILLDLDDPES   59 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH----Hh-CC---CeEEEeecCCHHH
Confidence            689999999999999999999999999999998 444322    11 12   3456677777654

>PRK07023 short chain dehydrogenase; Provisional

Probab=98.39  E-value=1.3e-06  Score=67.21  Aligned_cols=58  Identities=24%  Similarity=0.365  Sum_probs=44.3

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++||||++|||.++++.|+++|++|++++|+... +.    ....+ ..+.+..+|+++.++.
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~-~~----~~~~~-~~~~~~~~D~~~~~~~   60 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP-SL----AAAAG-ERLAEVELDLSDAAAA   60 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch-hh----hhccC-CeEEEEEeccCCHHHH
Confidence            69999999999999999999999999999998211 11    12222 3466778899887654

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=98.38  E-value=1.3e-06  Score=67.42  Aligned_cols=56  Identities=30%  Similarity=0.526  Sum_probs=47.3

Q ss_pred             CCC--ChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           87 GST--KGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        87 G~s--~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |++  +|||+++|++|+++|++|++++|+ +++++..+++.++.+..   +..+|+++.+++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~---~~~~D~~~~~~v   59 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE---VIQCDLSDEESV   59 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE---EEESCTTSHHHH
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc---eEeecCcchHHH
Confidence            566  999999999999999999999999 77777888888876643   488999887654

...

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=98.38  E-value=1.4e-06  Score=70.92  Aligned_cols=64  Identities=19%  Similarity=0.113  Sum_probs=47.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      ++||.++||||+++||.++++.|++.|++|++++|+ +...+....+. .  ...+.+..+|+++.+.
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~--~~~~~~~~~Dl~~~~~   66 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-L--AKKIEDHFGDIRDAAK   66 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-h--cCCceEEEccCCCHHH
Confidence            468899999999999999999999999999999988 43332222221 1  1235566778887654

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK06953 short chain dehydrogenase; Provisional

Probab=98.37  E-value=1.3e-06  Score=66.46  Aligned_cols=56  Identities=25%  Similarity=0.370  Sum_probs=43.5

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |+++|||+++|||..++++|++.|++|++++|+ +.+++    +... +   +.+..+|+++.++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~----~~~~-~---~~~~~~D~~~~~~   58 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA----LQAL-G---AEALALDVADPAS   58 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH----HHhc-c---ceEEEecCCCHHH
Confidence            689999999999999999999999999999998 43332    2221 1   3456788887754

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=98.37  E-value=2e-06  Score=69.04  Aligned_cols=66  Identities=18%  Similarity=0.048  Sum_probs=47.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhC-CceEEEEeccccchhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG-EQHVCVTWQHSAALSR  144 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~  144 (147)
                      ..||+++||||++.||..+++.|+++|++|+++.|+ +..+.. .++....+ ...+.+...|+++.+.
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~   70 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKT-EHLLALDGAKERLKLFKADLLEESS   70 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHH-HHHHhccCCCCceEEEecCCCCcch
Confidence            468999999999999999999999999999988888 433332 22222111 2246677788887654

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.37  E-value=1.6e-06  Score=73.00  Aligned_cols=64  Identities=20%  Similarity=0.290  Sum_probs=46.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .+++|+++|||+++|||.++++.|++.|++|+++++.+..++ .+++.++.+.   .+..+|+++.++
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~-l~~~~~~~~~---~~~~~Dv~~~~~  270 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEA-LAAVANRVGG---TALALDITAPDA  270 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHH-HHHHHHHcCC---eEEEEeCCCHHH
Confidence            568999999999999999999999999999999988622121 2223233232   345678877654

>PLN02240 UDP-glucose 4-epimerase

Probab=98.34  E-value=3e-06  Score=68.53  Aligned_cols=68  Identities=18%  Similarity=0.180  Sum_probs=47.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHh--CCceEEEEeccccchhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEF--GEQHVCVTWQHSAALSR  144 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~--~~~~v~~~~~Dvs~~~~  144 (147)
                      ++.+|+++||||+++||..+++.|++.|++|+++++. ....+....+....  ....+.+..+|+.+.++
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   72 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEA   72 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHH
Confidence            5778999999999999999999999999999999875 22222222222211  11235667788887654

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=98.32  E-value=2.8e-06  Score=64.52  Aligned_cols=60  Identities=32%  Similarity=0.443  Sum_probs=46.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      ++|||++++||..+++.|+++|++|++++|+  +.+++...++... + ..+.+..+|+++.++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~   62 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY-G-VKALGVVCDVSDRED   62 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-C-CceEEEEecCCCHHH
Confidence            5899999999999999999999999999887  3444444555433 2 246778889988764

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08219 short chain dehydrogenase; Provisional

Probab=98.31  E-value=2.5e-06  Score=64.46  Aligned_cols=59  Identities=25%  Similarity=0.330  Sum_probs=45.1

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+++||||+++||..+++.|+++ ++|++++|+ +.+++..+++    .  .+.+..+|+++.++.
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~~~   62 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----P--GATPFPVDLTDPEAI   62 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----c--cceEEecCCCCHHHH
Confidence            578999999999999999999999 999999998 5443332221    1  256678888876553

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.31  E-value=5.1e-06  Score=62.11  Aligned_cols=62  Identities=24%  Similarity=0.335  Sum_probs=48.3

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC----hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGD-NVIICSRS----ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~----~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++||||.+|||..+++.|+.+|+ +|+++.|+    ...++..+++...  ...+.+..+|++|.++.
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~--g~~v~~~~~Dv~d~~~v   68 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA--GARVEYVQCDVTDPEAV   68 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT--T-EEEEEE--TTSHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC--CCceeeeccCccCHHHH
Confidence            689999999999999999999985 79999988    2445667777654  34789999999998764

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK07577 short chain dehydrogenase; Provisional

Probab=98.30  E-value=2.1e-06  Score=65.35  Aligned_cols=35  Identities=46%  Similarity=0.637  Sum_probs=33.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+|+++||||++|||..+++.|+++|++|++++|+
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~   36 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARS   36 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            57899999999999999999999999999999987

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.28  E-value=5e-06  Score=62.45  Aligned_cols=60  Identities=12%  Similarity=0.107  Sum_probs=46.6

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++||||+ |+|..++..|++.|++|++++|+ +.+++....+..   ...+.+..+|++|.++.
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv   62 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT---PESITPLPLDYHDDDAL   62 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHH
Confidence            68999998 88889999999999999999998 555554444421   23577788899987664

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.28  E-value=5e-06  Score=65.02  Aligned_cols=68  Identities=24%  Similarity=0.344  Sum_probs=59.8

Q ss_pred             CCCCCCeEEEeCCC--ChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s--~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..|+||.++|+|-.  ++|+..||+.|.++|++++.++.++++++.++++.+..+.  -.+..||+++.+++
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s--~~v~~cDV~~d~~i   71 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGS--DLVLPCDVTNDESI   71 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccC--CeEEecCCCCHHHH
Confidence            46899999999954  7999999999999999999999999999999999887654  56789999988764

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=98.27  E-value=5.8e-06  Score=68.93  Aligned_cols=70  Identities=20%  Similarity=0.296  Sum_probs=49.4

Q ss_pred             CCCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH--HHHHHHHHhCCceEEEEeccccchhh
Q 032098           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS--AVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        73 ~~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~--~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +...+.++++++||||++.||..++++|+++|++|++++|+ +....  ..+++....  ..+.+...|++|.+.
T Consensus        53 ~~~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~--~~v~~v~~Dl~d~~~  125 (390)
T PLN02657         53 FRSKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKEL--PGAEVVFGDVTDADS  125 (390)
T ss_pred             ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhc--CCceEEEeeCCCHHH
Confidence            33445678899999999999999999999999999999998 33221  112222221  235667778877654

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=98.27  E-value=2.3e-06  Score=69.26  Aligned_cols=69  Identities=19%  Similarity=0.127  Sum_probs=49.0

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhH-HHHHHHHHHH--hCCceEEEEeccccchhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERV-DSAVQSLREE--FGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~-~~~~~~l~~~--~~~~~v~~~~~Dvs~~~~  144 (147)
                      .++++|+++||||+++||..++++|++.|++|++++|+ +.. ....+++...  .....+.+..+|+.|.++
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   74 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASS   74 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHH
Confidence            35788999999999999999999999999999999887 321 1122222111  012246777888887654

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.25  E-value=4.3e-06  Score=69.98  Aligned_cols=66  Identities=20%  Similarity=0.221  Sum_probs=46.5

Q ss_pred             CCCCeEEEeCCCChHHHH--HHHHHHHCCCEEEEeecC-hhHH-----------HHHHHHHHHhCCceEEEEeccccchh
Q 032098           78 LPPYNVLITGSTKGIGYA--LAKEFLKAGDNVIICSRS-ERVD-----------SAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~--~a~~La~~Ga~Vvi~~r~-~~~~-----------~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      --+|+++|||+++|||++  +|++| +.|++|+++++. +..+           +..+++.+..+. .+....+|+++.+
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~-~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGL-YAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCC-ceEEEEcCCCCHH
Confidence            347999999999999999  89999 999998888754 2211           122222233333 3566789999876


Q ss_pred             hh
Q 032098          144 RH  145 (147)
Q Consensus       144 ~~  145 (147)
                      +.
T Consensus       117 ~v  118 (398)
T PRK13656        117 IK  118 (398)
T ss_pred             HH
Confidence            54

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.25  E-value=6.8e-06  Score=61.97  Aligned_cols=51  Identities=29%  Similarity=0.445  Sum_probs=44.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEF  127 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~  127 (147)
                      +++++.++|.||++++|+.+++.|++.|++|++++|+ +++++..+++.+..
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~   76 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF   76 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc
Confidence            5788999999999999999999999999999999999 77777777665443

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PLN02686 cinnamoyl-CoA reductase

Probab=98.24  E-value=7.1e-06  Score=67.70  Aligned_cols=68  Identities=16%  Similarity=0.182  Sum_probs=49.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHh--C--CceEEEEeccccchhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEF--G--EQHVCVTWQHSAALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~--~--~~~v~~~~~Dvs~~~~  144 (147)
                      ...++|+++||||+++||..++++|++.|++|+++.|+ +..++. +++....  +  ...+.+...|++|.++
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~  121 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPES  121 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHH
Confidence            45678999999999999999999999999999988887 443332 3332110  0  1236677789888764

>PLN00198 anthocyanidin reductase; Provisional

Probab=98.23  E-value=6.5e-06  Score=66.56  Aligned_cols=67  Identities=16%  Similarity=0.040  Sum_probs=47.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .+++|+++||||++.||..++++|++.|++|++++|+ +...... .+........+.+...|++|.++
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~   73 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIA-HLRALQELGDLKIFGADLTDEES   73 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH-HHHhcCCCCceEEEEcCCCChHH
Confidence            3567899999999999999999999999999888887 3332221 11111011236677788887654

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=98.22  E-value=4.8e-06  Score=66.46  Aligned_cols=65  Identities=18%  Similarity=0.114  Sum_probs=45.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhC-CceEEEEeccccchhh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG-EQHVCVTWQHSAALSR  144 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~  144 (147)
                      ++|.++||||++.||..++++|+++|++|++++|+ +...+. ..+....+ ...+.+...|+.+.+.
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~   69 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDGAKERLHLFKANLLEEGS   69 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccCCCCceEEEeccccCcch
Confidence            46899999999999999999999999999999888 432222 22221111 1245667778876543

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=98.22  E-value=6.1e-06  Score=67.23  Aligned_cols=64  Identities=19%  Similarity=0.129  Sum_probs=48.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .+++.++||||++.||..++++|++.|++|++++|+ +.......++..   ...+.+...|+.+.++
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~   72 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGS   72 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHH
Confidence            466789999999999999999999999999999988 444433333321   2346677889887654

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.21  E-value=9.2e-06  Score=58.08  Aligned_cols=62  Identities=27%  Similarity=0.323  Sum_probs=44.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHH---HHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSA---VQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~---~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |+++|||+++|||.++++.|++.|+ .|++.+|+ +..++.   .+++...  ...+.+..+|+++.++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~   67 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL--GAEVTVVACDVADRAA   67 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc--CCeEEEEECCCCCHHH
Confidence            5789999999999999999999997 57888887 332222   2344332  2356677889987654

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN02650 dihydroflavonol-4-reductase

Probab=98.19  E-value=8.1e-06  Score=66.40  Aligned_cols=66  Identities=21%  Similarity=0.153  Sum_probs=47.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhC-CceEEEEeccccchhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG-EQHVCVTWQHSAALSR  144 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~  144 (147)
                      .+.|.++||||++.||..++++|+++|++|++++|+ +...+.. .+....+ ...+.+...|+.+.+.
T Consensus         3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~v~~Dl~d~~~   70 (351)
T PLN02650          3 SQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVK-HLLDLPGATTRLTLWKADLAVEGS   70 (351)
T ss_pred             CCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHH-HHHhccCCCCceEEEEecCCChhh
Confidence            356789999999999999999999999999999888 4443332 2211111 1235667778877643

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.18  E-value=7.1e-06  Score=71.12  Aligned_cols=70  Identities=29%  Similarity=0.348  Sum_probs=58.6

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+.||+++||||++.||.++++++++.+. ++++.+++ -.+.....++...++...+.+...|+.|.+..
T Consensus       246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~  317 (588)
T COG1086         246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRV  317 (588)
T ss_pred             hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHH
Confidence            358999999999999999999999999884 58889999 45566677887777767788888999988754

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.18  E-value=4.7e-06  Score=64.87  Aligned_cols=61  Identities=38%  Similarity=0.484  Sum_probs=47.0

Q ss_pred             CCCCeEEEeCCC-ChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGST-KGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s-~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      -+.|+++|||++ +|||.+++++|++.|+.|+.+.|. +...    +|...++   +.....|+++.+++
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~----~L~~~~g---l~~~kLDV~~~~~V   67 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMA----QLAIQFG---LKPYKLDVSKPEEV   67 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHh----hHHHhhC---CeeEEeccCChHHH
Confidence            345778888765 789999999999999999999998 5433    3443434   56778899988765

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.15  E-value=7.7e-06  Score=81.35  Aligned_cols=36  Identities=31%  Similarity=0.433  Sum_probs=33.5

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHC-CCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~-Ga~Vvi~~r~  113 (147)
                      -++++++||||++|||++++++|+++ |++|++++|+
T Consensus      1995 ~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813      1995 NSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence            36899999999999999999999998 6999999987

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=98.15  E-value=7.2e-06  Score=66.48  Aligned_cols=64  Identities=22%  Similarity=0.184  Sum_probs=45.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhH-HHHHHHHHHHh---CCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERV-DSAVQSLREEF---GEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~-~~~~~~l~~~~---~~~~v~~~~~Dvs~~~~  144 (147)
                      |+++||||++.||..++++|++.|++|++++|+ +.. .+..+++....   ....+.+..+|++|.++
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   69 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSN   69 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHH
Confidence            689999999999999999999999999999987 321 11122221110   01236777889988764

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02572 UDP-sulfoquinovose synthase

Probab=98.14  E-value=1.4e-05  Score=67.73  Aligned_cols=38  Identities=24%  Similarity=0.275  Sum_probs=34.7

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeec
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r  112 (147)
                      ...+++|+++||||+++||..++++|+++|++|+++|+
T Consensus        42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~   79 (442)
T PLN02572         42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDN   79 (442)
T ss_pred             CccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEec
Confidence            44678899999999999999999999999999999875

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.13  E-value=1.2e-05  Score=64.74  Aligned_cols=63  Identities=14%  Similarity=0.212  Sum_probs=45.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCE-EEEeecC----hhHHHHHHHHHHHhCCceEEEEeccccch
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRS----ERVDSAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~-Vvi~~r~----~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      .+++|+++|+|+ +|+|++++..|+..|++ |++++|+    +++++..+++.+..+  .+.+..+|+++.
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~--~~~~~~~d~~~~  190 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP--ECIVNVYDLNDT  190 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC--CceeEEechhhh
Confidence            467899999999 59999999999999986 9999998    345555666644322  223334555543

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=98.09  E-value=8.6e-06  Score=62.16  Aligned_cols=55  Identities=25%  Similarity=0.331  Sum_probs=40.0

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCC--CEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      ++++||||++|||++++++|+++|  ..|++.+|++.. +        .....+.+..+|+++.++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~-~--------~~~~~~~~~~~Dls~~~~   57 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP-D--------FQHDNVQWHALDVTDEAE   57 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc-c--------cccCceEEEEecCCCHHH
Confidence            479999999999999999999985  566666665211 1        112346677889887765

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=98.05  E-value=1.5e-05  Score=62.29  Aligned_cols=63  Identities=32%  Similarity=0.462  Sum_probs=44.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHC-CCEEEEeecC--hhHHHHHHHHHHHh-CCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRS--ERVDSAVQSLREEF-GEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~-Ga~Vvi~~r~--~~~~~~~~~l~~~~-~~~~v~~~~~Dvs~~~~~  145 (147)
                      -|.++||||.+|||+.++++|.+. |-.+++..++  |.+   .+++.... ....+++.+.|+++.+++
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~~~d~rvHii~Ldvt~deS~   69 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKSKSDSRVHIIQLDVTCDESI   69 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhhccCCceEEEEEecccHHHH
Confidence            456999999999999999999864 5566665544  544   33333221 234699999999987654

>PLN02214 cinnamoyl-CoA reductase

Probab=98.04  E-value=3e-05  Score=63.21  Aligned_cols=65  Identities=17%  Similarity=0.167  Sum_probs=47.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH-HHHHHHHHhCCceEEEEeccccchhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS-AVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~-~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +++|.++||||++.||..++.+|+++|++|++++|+ +.... ...++..  ....+.+...|+.+.++
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~   74 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG--GKERLILCKADLQDYEA   74 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC--CCCcEEEEecCcCChHH
Confidence            567899999999999999999999999999999998 43222 1222221  12246667788887654

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=98.00  E-value=3e-05  Score=63.47  Aligned_cols=65  Identities=18%  Similarity=0.136  Sum_probs=50.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH--HHHHHHHHhCCceEEEEeccccchhhh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS--AVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~--~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++.+.||||++-||..+++.|+.+|+.|..+.|+ +..++  .+.++...  ...+..+..|+.+..+.
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a--~~~l~l~~aDL~d~~sf   72 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGA--KERLKLFKADLLDEGSF   72 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccC--cccceEEeccccccchH
Confidence            67899999999999999999999999999999999 44222  34444322  23477888888887653

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=97.98  E-value=3.7e-05  Score=59.78  Aligned_cols=59  Identities=14%  Similarity=0.273  Sum_probs=43.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccc
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAA  141 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~  141 (147)
                      ..++++++|||++++||..+++.|+..|++|+++.|+ +.+.+..    ..  ...+.+...|+.+
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~--~~~~~~~~~Dl~d   73 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL----PQ--DPSLQIVRADVTE   73 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhc----cc--CCceEEEEeeCCC
Confidence            4567899999999999999999999999999999888 4332211    11  1135566667765

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.88  E-value=7.5e-05  Score=54.90  Aligned_cols=52  Identities=27%  Similarity=0.345  Sum_probs=43.0

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |+|+||++.+|..++++|+++|++|+++.|+ ++.++          ...+.+...|+.|.+.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~   53 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDS   53 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhh
Confidence            6899999999999999999999999999999 54443          2346777888877754

...

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=97.87  E-value=5.6e-05  Score=61.48  Aligned_cols=68  Identities=24%  Similarity=0.179  Sum_probs=52.1

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecCh-hHHHHHHHHHHHhCCceEEEEeccccchhhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSLREEFGEQHVCVTWQHSAALSRHY  146 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~-~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~~  146 (147)
                      ...+.+|.|+|||+-+|.|+.+|+.|.+.|..|+....++ .+++...+..    .........||++.+++-
T Consensus        24 ~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~   92 (322)
T KOG1610|consen   24 LDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVK   92 (322)
T ss_pred             ccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHH
Confidence            3457899999999999999999999999999999988773 3343333321    234555689999988763

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=97.86  E-value=7.1e-05  Score=60.17  Aligned_cols=62  Identities=21%  Similarity=0.270  Sum_probs=42.8

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .++||||+++||..+++.|++.|.+|+++++. +........+... +...+.+...|+++.+.
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~   64 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEAL   64 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh-cCCCceEEEccCCCHHH
Confidence            58999999999999999999999999998875 3323222333222 22234555677776654

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=97.85  E-value=6.6e-05  Score=61.23  Aligned_cols=69  Identities=20%  Similarity=0.182  Sum_probs=48.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhC---CceEEEEeccccchhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG---EQHVCVTWQHSAALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~---~~~v~~~~~Dvs~~~~  144 (147)
                      -.+++|.++||||++=||..++++|+++|.+|++++|. ........++....+   ...+.+...|+.+.++
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~   83 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTD   83 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHH
Confidence            35678899999999999999999999999999999986 322222222221111   1236677788887653

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=97.83  E-value=4.4e-05  Score=61.77  Aligned_cols=62  Identities=26%  Similarity=0.449  Sum_probs=45.6

Q ss_pred             EEEeCCCChHHHHHHHHHHHCC-CEEEEeecC-hhHHHHHHHHHHHhCCceE----EEEeccccchhh
Q 032098           83 VLITGSTKGIGYALAKEFLKAG-DNVIICSRS-ERVDSAVQSLREEFGEQHV----CVTWQHSAALSR  144 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~-~~~~~~~~~l~~~~~~~~v----~~~~~Dvs~~~~  144 (147)
                      ++||||++.||.+++++|++.+ .+|+++|++ ..+-+...++....+...+    .....|+.|.+.
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~   68 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKER   68 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHH
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHH
Confidence            6899999999999999999998 579999999 5667777777655443223    345778888754

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=97.75  E-value=6.4e-05  Score=60.99  Aligned_cols=63  Identities=16%  Similarity=0.207  Sum_probs=40.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEE-EeecChhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVI-ICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vv-i~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |.++||||+++||..+++.|+++|++|+ +.++.+.... ...+........+.+..+|+.|.++
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~   65 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGN-LMSLAPVAQSERFAFEKVDICDRAE   65 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccc-hhhhhhcccCCceEEEECCCcChHH
Confidence            5799999999999999999999998754 5555422111 1111111112245666788887654

>TIGR01746 Thioester-redct thioester reductase domain

Probab=97.62  E-value=0.00018  Score=57.64  Aligned_cols=32  Identities=38%  Similarity=0.504  Sum_probs=29.8

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCC--CEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~  113 (147)
                      +++||||+++||..+++.|++.|  ++|+++.|+
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~   34 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRA   34 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEcc
Confidence            47999999999999999999999  789999988

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.59  E-value=0.00011  Score=61.79  Aligned_cols=38  Identities=37%  Similarity=0.553  Sum_probs=33.7

Q ss_pred             CCCCCCeEEEeCC---------------CCh-HHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGS---------------TKG-IGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~---------------s~G-IG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+++||+++||||               ++| +|+++|++|+.+|++|++++++
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~  237 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGP  237 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCC
Confidence            3589999999999               455 9999999999999999998765

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=97.59  E-value=0.00018  Score=56.85  Aligned_cols=60  Identities=17%  Similarity=0.214  Sum_probs=41.2

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .++||||+++||..+++.|++.|.+|++.++. ....+...++... +  .+....+|+++.++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~D~~~~~~   61 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI-T--RVTFVEGDLRDREL   61 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc-c--ceEEEECCCCCHHH
Confidence            37899999999999999999999999988765 2222222222111 1  35556678877654

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=97.59  E-value=0.00012  Score=58.11  Aligned_cols=32  Identities=34%  Similarity=0.559  Sum_probs=30.9

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +++||||+++||..+++.|++.|++|++++|+
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~   33 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRP   33 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEec
Confidence            68999999999999999999999999999998

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=97.57  E-value=0.00028  Score=57.77  Aligned_cols=65  Identities=22%  Similarity=0.246  Sum_probs=48.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhC-CceEEEEeccccchhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG-EQHVCVTWQHSAALSR  144 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~  144 (147)
                      ++.++||||++-||..++.+|.+.|..|+++|.- ....+.+..++...+ ...+.++..|+.|.+.
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~   68 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEA   68 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHH
Confidence            5789999999999999999999999999998865 222333333333322 3568889999988764

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=97.55  E-value=0.00023  Score=56.06  Aligned_cols=61  Identities=15%  Similarity=0.126  Sum_probs=41.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCC--CEEEEeecC-h-hHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRS-E-RVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~-~-~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++||||+++||..++++|++.|  .+|++.++. . .-.+..+.+.   ....+.+..+|+++.++.
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~   65 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE---DNPRYRFVKGDIGDRELV   65 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc---cCCCcEEEEcCCcCHHHH
Confidence            37999999999999999999987  689888764 1 1111122221   112355667788877653

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02427 UDP-apiose/xylose synthase

Probab=97.54  E-value=0.00032  Score=57.84  Aligned_cols=67  Identities=12%  Similarity=0.155  Sum_probs=45.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHC-CCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~-Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      ..+.+.++||||++-||..+++.|+++ |++|++++|+ +........ ........+.+...|+.|.+.
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~-~~~~~~~~~~~~~~Dl~d~~~   79 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEP-DTVPWSGRIQFHRINIKHDSR   79 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcc-ccccCCCCeEEEEcCCCChHH
Confidence            345568999999999999999999998 5899999987 433221110 000011236677778877654

>CHL00194 ycf39 Ycf39; Provisional

Probab=97.45  E-value=0.00047  Score=55.46  Aligned_cols=32  Identities=25%  Similarity=0.434  Sum_probs=30.8

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .++||||+|-||..++++|.++|++|++++|+
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~   33 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRN   33 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC
Confidence            58999999999999999999999999999998

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.45  E-value=0.00052  Score=57.79  Aligned_cols=47  Identities=32%  Similarity=0.443  Sum_probs=38.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLR  124 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~  124 (147)
                      ++++|.++|+|+++ +|.++|+.|++.|++|++.|++  +.+++..+++.
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~   50 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELG   50 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH
Confidence            47899999999877 9999999999999999999998  34444455553

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.43  E-value=0.00059  Score=48.84  Aligned_cols=46  Identities=26%  Similarity=0.429  Sum_probs=41.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCE-EEEeecC-hhHHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRS-ERVDSAVQSL  123 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~-Vvi~~r~-~~~~~~~~~l  123 (147)
                      ++++|.++|-|+ ||.|++++..|...|++ |.++.|+ +++++..+++
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~   56 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF   56 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc
Confidence            689999999998 99999999999999987 9999999 7777776666

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK07578 short chain dehydrogenase; Provisional

Probab=97.41  E-value=0.00026  Score=52.83  Aligned_cols=31  Identities=35%  Similarity=0.561  Sum_probs=28.9

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +++|||+++|||.++++.|+++ ++|++.+|+
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~   32 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRS   32 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecC
Confidence            6899999999999999999999 999998874

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=97.40  E-value=0.00046  Score=55.92  Aligned_cols=62  Identities=15%  Similarity=0.254  Sum_probs=38.8

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCE-EEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDN-VIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~-Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .++||||+++||..++++|++.|.+ |+++++...... .+.+........+.+...|+.|.++
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~   64 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGN-LESLADVSDSERYVFEHADICDRAE   64 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccch-HHHHHhcccCCceEEEEecCCCHHH
Confidence            5899999999999999999999976 544554311000 1111111112235566778887654

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.35  E-value=0.00056  Score=59.50  Aligned_cols=46  Identities=28%  Similarity=0.402  Sum_probs=39.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSL  123 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l  123 (147)
                      .+++|+++|+|+ +|+|++++..|++.|++|++++|+ ++++++.+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            478899999999 599999999999999999999998 6666665443

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.31  E-value=0.00087  Score=53.50  Aligned_cols=47  Identities=26%  Similarity=0.394  Sum_probs=40.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC-hhHHHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-ERVDSAVQSLR  124 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~-~~~~~~~~~l~  124 (147)
                      .+.+|.++|.|+ +|+|++++..|+..| .+|++++|+ +++++..+++.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            578899999997 899999999999999 789999999 77776666654

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.30  E-value=0.00052  Score=57.73  Aligned_cols=48  Identities=33%  Similarity=0.353  Sum_probs=38.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      +++||+++|||+++ +|.++++.|++.|++|++.|++ +...+..+++.+
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~   50 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE   50 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh
Confidence            46799999999975 9999999999999999999987 333344445543

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.27  E-value=0.00045  Score=58.02  Aligned_cols=38  Identities=34%  Similarity=0.465  Sum_probs=33.7

Q ss_pred             CCCCCCeEEEeCC---------------CCh-HHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGS---------------TKG-IGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~---------------s~G-IG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+++||.++||||               ++| +|.++|++|..+|++|++++++
T Consensus       181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~  234 (390)
T TIGR00521       181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGP  234 (390)
T ss_pred             cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCC
Confidence            3589999999999               567 9999999999999999987754

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.22  E-value=0.0018  Score=53.55  Aligned_cols=47  Identities=26%  Similarity=0.396  Sum_probs=39.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHC-C-CEEEEeecC-hhHHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKA-G-DNVIICSRS-ERVDSAVQSL  123 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~-G-a~Vvi~~r~-~~~~~~~~~l  123 (147)
                      ++++|+++||||++.||..+++.|+.. | .+|++++|+ +.+.+..+++
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el  201 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL  201 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh
Confidence            589999999999999999999999864 5 589999998 6666655554

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.19  E-value=0.0016  Score=49.77  Aligned_cols=46  Identities=28%  Similarity=0.462  Sum_probs=38.9

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHH
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQ  121 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~  121 (147)
                      ..+++||+++|.|.+ .+|..+++.|.+.|++|++.|++ +.+++..+
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~   69 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAE   69 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            346899999999996 89999999999999999999998 55555443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=97.19  E-value=0.0011  Score=51.29  Aligned_cols=53  Identities=26%  Similarity=0.313  Sum_probs=40.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      .++||||++.+|..++++|.+.|.+|.+..|+ +.+....         ..+.+...|+.+..
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~   55 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPK   55 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHh
Confidence            58999999999999999999999999999999 5443322         23455555665554

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=97.18  E-value=0.00099  Score=55.04  Aligned_cols=39  Identities=18%  Similarity=0.139  Sum_probs=35.0

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .++-++|.++||||++-||..++..|.++|++|++++|.
T Consensus        16 ~~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~   54 (370)
T PLN02695         16 YWPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWK   54 (370)
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEec
Confidence            334577899999999999999999999999999999986

>PLN02206 UDP-glucuronate decarboxylase

Probab=97.11  E-value=0.0018  Score=55.12  Aligned_cols=36  Identities=25%  Similarity=0.413  Sum_probs=33.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      -+++.++||||++-||..++++|+++|.+|+++++.
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~  152 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNF  152 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCC
Confidence            467899999999999999999999999999998875

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.10  E-value=0.0021  Score=51.03  Aligned_cols=46  Identities=35%  Similarity=0.509  Sum_probs=39.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLR  124 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~  124 (147)
                      .++|.++|+|+ +|+|++++..|+..|++|.+.+|+ +++++..+++.
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~  161 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQ  161 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence            56889999999 599999999999999999999999 66776666654

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=97.10  E-value=0.0023  Score=48.32  Aligned_cols=31  Identities=55%  Similarity=0.773  Sum_probs=28.9

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |+||||++-||..++..|.++|..|+...+.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~   31 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRS   31 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESC
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccc
Confidence            6899999999999999999999998877777

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=97.10  E-value=0.0014  Score=50.24  Aligned_cols=57  Identities=25%  Similarity=0.314  Sum_probs=39.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |+|+|+++.+|..+++.|++.|.+|.++.|+.. .+..+++... |..   +...|..|.++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~-~~~~~~l~~~-g~~---vv~~d~~~~~~   57 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS-SDRAQQLQAL-GAE---VVEADYDDPES   57 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH-HHHHHHHHHT-TTE---EEES-TT-HHH
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc-hhhhhhhhcc-cce---EeecccCCHHH
Confidence            689999999999999999999999999999841 2223344332 332   33556555544

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=97.04  E-value=0.0014  Score=53.28  Aligned_cols=32  Identities=31%  Similarity=0.541  Sum_probs=30.5

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .++||||++-||..++.+|++.|.+|++.|.-
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL   33 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNL   33 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecC
Confidence            68999999999999999999999999999876

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=96.94  E-value=0.0033  Score=55.68  Aligned_cols=65  Identities=15%  Similarity=0.237  Sum_probs=42.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHC--CCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~--Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      .++|.++||||++.||..++++|++.  |.+|++.++....... ..+........+.+...|+.|.+
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~-~~l~~~~~~~~v~~~~~Dl~d~~   70 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNL-KNLNPSKSSPNFKFVKGDIASAD   70 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchh-hhhhhcccCCCeEEEECCCCChH
Confidence            45689999999999999999999988  6789888875211111 11111111123566777887754

>PRK09620 hypothetical protein; Provisional

Probab=96.93  E-value=0.002  Score=50.31  Aligned_cols=35  Identities=31%  Similarity=0.427  Sum_probs=31.5

Q ss_pred             CCCCeEEEeCCC----------------ChHHHHHHHHHHHCCCEEEEeec
Q 032098           78 LPPYNVLITGST----------------KGIGYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        78 l~gkv~vVTG~s----------------~GIG~~~a~~La~~Ga~Vvi~~r  112 (147)
                      |+||.++||+|.                |-||..+|++|+.+|++|++++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g   51 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHG   51 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeC
Confidence            478999999886                88999999999999999998775

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=96.87  E-value=0.0038  Score=55.44  Aligned_cols=36  Identities=25%  Similarity=0.197  Sum_probs=33.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHC-CCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~-Ga~Vvi~~r~  113 (147)
                      ..++.++||||++-||..++++|++. |++|++++|.
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~  349 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIG  349 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCC
Confidence            46788999999999999999999986 7999999987

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.86  E-value=0.0029  Score=53.15  Aligned_cols=59  Identities=22%  Similarity=0.375  Sum_probs=45.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.++|-|+ ++||..+|+.|++.| .+|.+.||+ +++.+..+...     ..+...++|+.+.++.
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~-----~~v~~~~vD~~d~~al   62 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG-----GKVEALQVDAADVDAL   62 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc-----ccceeEEecccChHHH
Confidence            46788888 999999999999999 899999999 76665544321     1466777787776543

>PLN02778 3,5-epimerase/4-reductase

Probab=96.84  E-value=0.0066  Score=48.70  Aligned_cols=44  Identities=27%  Similarity=0.189  Sum_probs=34.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLR  124 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~  124 (147)
                      +.++||||++-||..++++|.++|.+|++...+ ...+.....+.
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~   54 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADID   54 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHH
Confidence            579999999999999999999999999865544 44444444443

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.83  E-value=0.0062  Score=43.64  Aligned_cols=46  Identities=26%  Similarity=0.442  Sum_probs=37.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC-hhHHHHHHHHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-ERVDSAVQSLR  124 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~-~~~~~~~~~l~  124 (147)
                      ++++.++|.|+ +++|..+++.|.+.| .+|++.+|+ +..++..+++.
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~   64 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFG   64 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence            56788999998 799999999999996 789999999 66666555543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=96.82  E-value=0.0052  Score=49.85  Aligned_cols=33  Identities=30%  Similarity=0.242  Sum_probs=30.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHC-CCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKA-GDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~-Ga~Vvi~~r~  113 (147)
                      +.++||||++-||..++++|++. |.+|++++|+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~   35 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQ   35 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCc
Confidence            46999999999999999999986 6899999987

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=96.82  E-value=0.002  Score=50.77  Aligned_cols=31  Identities=35%  Similarity=0.462  Sum_probs=30.0

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ++|||+++-||..++.+|.+.|++|+.++|.
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~   33 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRL   33 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCC
Confidence            8999999999999999999999999999986

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=96.81  E-value=0.0016  Score=50.90  Aligned_cols=31  Identities=48%  Similarity=0.642  Sum_probs=29.8

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ++||||++.||..+++.|++.|++|++++|+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   31 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRS   31 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCC
Confidence            5899999999999999999999999999998

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN00016 RNA-binding protein; Provisional

Probab=96.81  E-value=0.0026  Score=52.49  Aligned_cols=36  Identities=42%  Similarity=0.624  Sum_probs=33.3

Q ss_pred             CCCCeEEEe----CCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLIT----GSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVT----G~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ...+.++||    ||++.||..+++.|++.|++|++++|+
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~   89 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRG   89 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecC
Confidence            445789999    999999999999999999999999998

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=96.78  E-value=0.002  Score=50.77  Aligned_cols=31  Identities=29%  Similarity=0.397  Sum_probs=30.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ++||||++.||..++++|++.|++|.+..|+
T Consensus         2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~   32 (285)
T TIGR03649         2 ILLTGGTGKTASRIARLLQAASVPFLVASRS   32 (285)
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCcEEEEeCC
Confidence            7899999999999999999999999999998

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK07201 short chain dehydrogenase; Provisional

Probab=96.76  E-value=0.0064  Score=53.32  Aligned_cols=60  Identities=20%  Similarity=0.282  Sum_probs=42.1

Q ss_pred             eEEEeCCCChHHHHHHHHHH--HCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccch
Q 032098           82 NVLITGSTKGIGYALAKEFL--KAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La--~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      .++||||++-||..+++.|+  ..|.+|++++|+..... .+++....+...+.+...|+.+.
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~   63 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSR-LEALAAYWGADRVVPLVGDLTEP   63 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHH-HHHHHHhcCCCcEEEEecccCCc
Confidence            59999999999999999999  58999999999732222 22222222223466777788763

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=96.72  E-value=0.0035  Score=52.20  Aligned_cols=67  Identities=15%  Similarity=0.143  Sum_probs=47.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCC--CEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++++++||||++=+|..++.+|.+.|  .+|.+.|.........++.... ....+.++..|+.+..++
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~-~~~~v~~~~~D~~~~~~i   70 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF-RSGRVTVILGDLLDANSI   70 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc-cCCceeEEecchhhhhhh
Confidence            467799999999999999999999999  7899998873222222222111 244677888888776554

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=96.64  E-value=0.0018  Score=51.75  Aligned_cols=58  Identities=17%  Similarity=0.198  Sum_probs=40.3

Q ss_pred             EEeCCCChHHHHHHHHHHHCC--CEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           84 LITGSTKGIGYALAKEFLKAG--DNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        84 vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +||||++-||..++++|+++|  .+|.+.|+...... ...+ ..  .....+...|++|.++.
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~-~~~~-~~--~~~~~~~~~Di~d~~~l   60 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF-LKDL-QK--SGVKEYIQGDITDPESL   60 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc-chhh-hc--ccceeEEEeccccHHHH
Confidence            599999999999999999999  78999998722111 1111 11  11233777888877654

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=96.62  E-value=0.0031  Score=49.37  Aligned_cols=31  Identities=29%  Similarity=0.492  Sum_probs=29.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ++||||++.||..+++.|.+.|++|++++|.
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~   32 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS   32 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence            7999999999999999999999999998885

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=96.53  E-value=0.019  Score=50.96  Aligned_cols=69  Identities=20%  Similarity=0.203  Sum_probs=51.0

Q ss_pred             CCCCCCCeEEEeCCC-ChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhC--CceEEEEeccccchh
Q 032098           75 EPMLPPYNVLITGST-KGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFG--EQHVCVTWQHSAALS  143 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s-~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~  143 (147)
                      .....+|+++|||++ +.||.+++..|+..|++|+++.-+  ++-.+..+.|-..++  +..+.++..+..+..
T Consensus       391 ~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~Sys  464 (866)
T COG4982         391 GGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYS  464 (866)
T ss_pred             CCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchh
Confidence            345788999999988 559999999999999999998766  444455555555543  346777777766543

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=96.53  E-value=0.005  Score=52.29  Aligned_cols=35  Identities=23%  Similarity=0.440  Sum_probs=32.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +.+.++||||++-||..++++|+++|.+|+++++.
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~  153 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNF  153 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            44579999999999999999999999999999986

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=96.52  E-value=0.016  Score=43.90  Aligned_cols=60  Identities=23%  Similarity=0.344  Sum_probs=37.7

Q ss_pred             CCCCeEEEeCC----------------CChHHHHHHHHHHHCCCEEEEeecC--------------hhHHHHHHHHHHHh
Q 032098           78 LPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRS--------------ERVDSAVQSLREEF  127 (147)
Q Consensus        78 l~gkv~vVTG~----------------s~GIG~~~a~~La~~Ga~Vvi~~r~--------------~~~~~~~~~l~~~~  127 (147)
                      |+||.++||+|                ++.+|.++|+++..+|++|+++...              +..++..+.+.+..
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~p~~~~~i~v~sa~em~~~~~~~~   80 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPPPPGVKVIRVESAEEMLEAVKELL   80 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----TTEEEEE-SSHHHHHHHHHHHG
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccccccceEEEecchhhhhhhhcccc
Confidence            46788888876                4679999999999999999987655              12445555555554


Q ss_pred             CCceEEEEec
Q 032098          128 GEQHVCVTWQ  137 (147)
Q Consensus       128 ~~~~v~~~~~  137 (147)
                      ....+.+...
T Consensus        81 ~~~Di~I~aA   90 (185)
T PF04127_consen   81 PSADIIIMAA   90 (185)
T ss_dssp             GGGSEEEE-S
T ss_pred             CcceeEEEec
Confidence            4444555443

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.48  E-value=0.0093  Score=51.29  Aligned_cols=45  Identities=24%  Similarity=0.411  Sum_probs=37.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQS  122 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~  122 (147)
                      .+++|.++|+|+ +|+|++++..|+..|++|++.+|+ +++++..++
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            467899999996 699999999999999999999998 555554433

>PRK05865 hypothetical protein; Provisional

Probab=96.43  E-value=0.0091  Score=54.79  Aligned_cols=32  Identities=25%  Similarity=0.476  Sum_probs=30.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .++||||++.||..++++|++.|++|++++|+
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~   33 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARH   33 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECC
Confidence            58999999999999999999999999999987

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.42  E-value=0.012  Score=43.85  Aligned_cols=43  Identities=21%  Similarity=0.368  Sum_probs=37.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      .++.||.++|.|++.-+|..++..|.+.|++|.++.|+ +++.+
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~   83 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKE   83 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHH
Confidence            46899999999996667999999999999999999998 55544

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=96.36  E-value=0.0054  Score=48.71  Aligned_cols=31  Identities=23%  Similarity=0.358  Sum_probs=26.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ++||||++.||..++++|++.|.+++++.++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~   32 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN   32 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecC
Confidence            7999999999999999999999865554333

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=96.34  E-value=0.014  Score=43.24  Aligned_cols=62  Identities=23%  Similarity=0.301  Sum_probs=43.4

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhC---------CceEEEEeccccchhhh
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFG---------EQHVCVTWQHSAALSRH  145 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~---------~~~v~~~~~Dvs~~~~~  145 (147)
                      ++.+|+.+-+|+++|.+|+++|-+|++++. ++.+.+..++..+..         ...+.++.+.+++.+|.
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~~~-~~y~~lk~~~~~~~~~~Lv~~~~~~~K~WlVGd~l~~~EQ~   71 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVMLSK-ERYESLKSEAPEECQSNLVQSTSYQAKTWLVGDGLTEEEQK   71 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEecH-HHHHHHHHHcCHHhhccEEeecCCCceeEEeCCCCCHHHHh
Confidence            578999999999999999999999999843 444444444443321         22455666666666654

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.27  E-value=0.027  Score=45.28  Aligned_cols=49  Identities=22%  Similarity=0.274  Sum_probs=41.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQSLREE  126 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~l~~~  126 (147)
                      .+++|.++|-|+ +|.|++++..|+..|+ +|++++|+ +++++..+++...
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~  174 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR  174 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence            467888999988 8899999999999997 79999999 7777777777544

>PLN02503 fatty acyl-CoA reductase 2

Probab=96.24  E-value=0.018  Score=51.04  Aligned_cols=36  Identities=25%  Similarity=0.363  Sum_probs=32.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC---EEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD---NVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga---~Vvi~~r~  113 (147)
                      ++||.++||||++-||..+++.|++.+.   +|+++.|.
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~  155 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKA  155 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence            6899999999999999999999998653   67888886

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=96.22  E-value=0.022  Score=48.21  Aligned_cols=46  Identities=26%  Similarity=0.393  Sum_probs=38.5

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHH
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAV  120 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~  120 (147)
                      ..+.+-..++|+||++++|+-+++.|.++|..|...-|+ ++.++..
T Consensus        74 ~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~  120 (411)
T KOG1203|consen   74 NNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLL  120 (411)
T ss_pred             CCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhh
Confidence            345677799999999999999999999999999999998 5544443

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.20  E-value=0.017  Score=47.87  Aligned_cols=57  Identities=19%  Similarity=0.321  Sum_probs=41.4

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCC--EEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           83 VLITGSTKGIGYALAKEFLKAGD--NVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga--~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |+|-|+ +.+|..+++.|++.+-  +|++.||+ +++++..+++    ....+....+|+.|.++
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~   60 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPES   60 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHH
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHH
Confidence            678899 9999999999999874  79999999 7777666554    33467788888888765

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=96.15  E-value=0.0067  Score=47.95  Aligned_cols=31  Identities=23%  Similarity=0.440  Sum_probs=28.2

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      ++||||++.||..+++.|.+.|. +|+++++.
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~   32 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNL   32 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecC
Confidence            58999999999999999999997 68888765

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=96.10  E-value=0.015  Score=47.27  Aligned_cols=39  Identities=26%  Similarity=0.323  Sum_probs=34.9

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ....+++.++||||++=||..++..|..+|..|+++|--
T Consensus        22 ~~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~   60 (350)
T KOG1429|consen   22 VKPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNY   60 (350)
T ss_pred             ccCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecc
Confidence            345677999999999999999999999999999998865

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.07  E-value=0.037  Score=44.55  Aligned_cols=49  Identities=16%  Similarity=0.279  Sum_probs=40.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQSLREE  126 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~l~~~  126 (147)
                      .+++|.++|-|+ +|-+++++..|+..|+ +|.+.+|+ ++++++.+.+...
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~  174 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA  174 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc
Confidence            366888999988 8999999999999996 68899999 7777777666443

>PLN02996 fatty acyl-CoA reductase

Probab=96.01  E-value=0.02  Score=49.29  Aligned_cols=36  Identities=19%  Similarity=0.341  Sum_probs=31.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCC---CEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAG---DNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~G---a~Vvi~~r~  113 (147)
                      ++||+++||||+|-||..++..|++.+   .+|+++.|.
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~   47 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA   47 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeC
Confidence            789999999999999999999999865   357888886

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.99  E-value=0.039  Score=44.53  Aligned_cols=50  Identities=26%  Similarity=0.358  Sum_probs=42.1

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC-hhHHHHHHHHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-ERVDSAVQSLREE  126 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~-~~~~~~~~~l~~~  126 (147)
                      .+.+|+.++|-|+ +|-+++++..|++.| .+|+++.|+ ++++++.+.+.+.
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~  173 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGEL  173 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc
Confidence            3456899999988 899999999999999 479999999 8888877777644

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=95.94  E-value=0.042  Score=42.72  Aligned_cols=32  Identities=28%  Similarity=0.395  Sum_probs=27.1

Q ss_pred             CeEEEeCC-CChHHHHHHHHHHHCCCEEEEeec
Q 032098           81 YNVLITGS-TKGIGYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        81 kv~vVTG~-s~GIG~~~a~~La~~Ga~Vvi~~r  112 (147)
                      .|=.||.. ++|||+++|++|+++|++|+++++
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~   47 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTT   47 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcC
Confidence            35567765 678999999999999999999874

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.93  E-value=0.033  Score=40.40  Aligned_cols=44  Identities=23%  Similarity=0.305  Sum_probs=38.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      .+++||.++|-|.+.-+|..++..|.++|+.|.+++++ ..+++.
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~   68 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSK   68 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHH
Confidence            36899999999999999999999999999999999876 445443

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=95.82  E-value=0.013  Score=46.83  Aligned_cols=31  Identities=29%  Similarity=0.539  Sum_probs=28.2

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .++||||++-||..+++.|.+.| +|++++|.
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~   32 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVH   32 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccc
Confidence            59999999999999999999999 78888764

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.81  E-value=0.039  Score=44.23  Aligned_cols=46  Identities=17%  Similarity=0.291  Sum_probs=38.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQSL  123 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~l  123 (147)
                      .+++|.++|-|+ +|.+++++..|+..|+ +|.++.|+ +++++..+++
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~  169 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLG  169 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh
Confidence            367888888876 9999999999999996 69999999 7777766655

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=95.81  E-value=0.037  Score=43.01  Aligned_cols=58  Identities=21%  Similarity=0.292  Sum_probs=36.8

Q ss_pred             EeCCCChHHHHHHHHHHHCCC--EEEEeecChhHHHHHHHHHH---------Hh---CCceEEEEeccccch
Q 032098           85 ITGSTKGIGYALAKEFLKAGD--NVIICSRSERVDSAVQSLRE---------EF---GEQHVCVTWQHSAAL  142 (147)
Q Consensus        85 VTG~s~GIG~~~a~~La~~Ga--~Vvi~~r~~~~~~~~~~l~~---------~~---~~~~v~~~~~Dvs~~  142 (147)
                      |||++|-||..+..+|++.+.  +|+++.|........+.+.+         ..   -...+.++..|++++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~   72 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQP   72 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSG
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEecccccc
Confidence            799999999999999999886  89999998322222222211         11   134688888899874

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=95.80  E-value=0.016  Score=45.10  Aligned_cols=32  Identities=31%  Similarity=0.490  Sum_probs=28.6

Q ss_pred             eEEEeCCCCh-HHHHHHHHHHHCCCEEEEeecC
Q 032098           82 NVLITGSTKG-IGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~G-IG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |=.||+.++| ||.++|++|+++|++|++++++
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~   49 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTK   49 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECc
Confidence            7788987776 9999999999999999998865

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.70  E-value=0.041  Score=44.52  Aligned_cols=42  Identities=21%  Similarity=0.301  Sum_probs=37.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      .++||.++|.|++.=+|+.++..|...|+.|+++.++ ..+.+
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~  197 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMAS  197 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHH
Confidence            6999999999999999999999999999999999887 44443

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=95.69  E-value=0.039  Score=44.44  Aligned_cols=37  Identities=27%  Similarity=0.406  Sum_probs=34.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+.||.++|.|. +++|..+++.|...|++|++.+|+
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~  183 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARS  183 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4688999999999 669999999999999999999998

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK06849 hypothetical protein; Provisional

Probab=95.69  E-value=0.026  Score=46.87  Aligned_cols=35  Identities=34%  Similarity=0.458  Sum_probs=32.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..|+|+|||++.++|+.+++.|.+.|.+|++++.+
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~   37 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSL   37 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            45799999999999999999999999999998877

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.60  E-value=0.042  Score=40.88  Aligned_cols=37  Identities=22%  Similarity=0.334  Sum_probs=29.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .++.||+++|.|- +-+|+.+|+.|...|++|++++.+
T Consensus        19 ~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~D   55 (162)
T PF00670_consen   19 LMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEID   55 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SS
T ss_pred             eeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECC
Confidence            4689999999998 789999999999999999999998

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=95.58  E-value=0.038  Score=45.12  Aligned_cols=68  Identities=16%  Similarity=0.100  Sum_probs=51.6

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRHY  146 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~~  146 (147)
                      ..++|-|+-|-|+++=+|+-++..|++.|.+|++-+|- +..-...+-+ .+  -.++.+..-|+.|++++.
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvm-Gd--LGQvl~~~fd~~DedSIr  125 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVM-GD--LGQVLFMKFDLRDEDSIR  125 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeec-cc--ccceeeeccCCCCHHHHH
Confidence            46789999999999999999999999999999999987 2211111111 12  235788888999998875

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=95.42  E-value=0.078  Score=45.76  Aligned_cols=60  Identities=22%  Similarity=0.282  Sum_probs=42.7

Q ss_pred             CCCCCCeEEEeCC----------------CChHHHHHHHHHHHCCCEEEEeecC--------------hhHHHHHHHHHH
Q 032098           76 PMLPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRS--------------ERVDSAVQSLRE  125 (147)
Q Consensus        76 ~~l~gkv~vVTG~----------------s~GIG~~~a~~La~~Ga~Vvi~~r~--------------~~~~~~~~~l~~  125 (147)
                      .+|+||.++||+|                +|-+|+++|+++..+|++|+++.-.              +..++..+.+.+
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~~~p~~v~~i~V~ta~eM~~av~~  331 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDLADPQGVKVIHVESARQMLAAVEA  331 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCCCCCCCceEEEecCHHHHHHHHHh
Confidence            3589999999987                3569999999999999999886421              335666666655


Q ss_pred             HhCCceEEEEe
Q 032098          126 EFGEQHVCVTW  136 (147)
Q Consensus       126 ~~~~~~v~~~~  136 (147)
                      .... .+.+..
T Consensus       332 ~~~~-Di~I~a  341 (475)
T PRK13982        332 ALPA-DIAIFA  341 (475)
T ss_pred             hCCC-CEEEEe
Confidence            5442 344443

>PRK12320 hypothetical protein; Provisional

Probab=95.36  E-value=0.03  Score=50.42  Aligned_cols=32  Identities=22%  Similarity=0.470  Sum_probs=30.4

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .++||||++-||..++.+|.+.|++|+++++.
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~   33 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQH   33 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence            58999999999999999999999999999986

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=95.36  E-value=0.057  Score=43.47  Aligned_cols=36  Identities=14%  Similarity=0.125  Sum_probs=32.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      -.|..++|+|+++++|..+++.....|++|+.++++
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~  185 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGS  185 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCC
Confidence            368899999999999999999888899999888877

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.35  E-value=0.04  Score=40.88  Aligned_cols=45  Identities=24%  Similarity=0.389  Sum_probs=35.1

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAV  120 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~  120 (147)
                      .+++||.++|-|.+.-+|+.++..|.++|+.|.+++.. +.+++..
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~   77 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEIT   77 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHH
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccccee
Confidence            35899999999999999999999999999999999887 5555443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=95.33  E-value=0.061  Score=41.78  Aligned_cols=36  Identities=31%  Similarity=0.332  Sum_probs=33.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+++.++|+|+++++|..+++.+...|++|++++++
T Consensus       138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~  173 (323)
T cd05276         138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGS  173 (323)
T ss_pred             CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCC
Confidence            467899999999999999999999999999988887

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.28  E-value=0.058  Score=41.26  Aligned_cols=36  Identities=25%  Similarity=0.315  Sum_probs=33.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +++||.++|-|| |.+|...++.|.+.|++|+++++.
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~   42 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE   42 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Confidence            589999999998 899999999999999999998766

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.27  E-value=0.052  Score=44.21  Aligned_cols=44  Identities=16%  Similarity=0.207  Sum_probs=38.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      -+++||.+.|-|.++-+|+.++..|.+.|+.|.+++++ ..+.+.
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~  199 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKAL  199 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHH
Confidence            36899999999999999999999999999999999877 544443

>cd08293 PTGR2 Prostaglandin reductase

Probab=95.23  E-value=0.063  Score=43.07  Aligned_cols=34  Identities=15%  Similarity=0.093  Sum_probs=30.2

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      |.+++|+|+++++|..+++.....|+ +|+.++++
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s  189 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGS  189 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            37999999999999999988888898 79888777

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=95.21  E-value=0.046  Score=35.73  Aligned_cols=34  Identities=29%  Similarity=0.299  Sum_probs=23.3

Q ss_pred             CC-CeEEEeCCCChHHHHHHHHHH-HCCCEEEEeec
Q 032098           79 PP-YNVLITGSTKGIGYALAKEFL-KAGDNVIICSR  112 (147)
Q Consensus        79 ~g-kv~vVTG~s~GIG~~~a~~La-~~Ga~Vvi~~r  112 (147)
                      +| |.++|+|+++|.|++....++ ..|++.+-+..
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~f   72 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAFGAGADTIGVSF   72 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE-
T ss_pred             CCCceEEEEecCCcccHHHHHHHHhcCCCCEEEEee
Confidence            45 889999999999999555555 67788776554

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=95.18  E-value=0.075  Score=41.37  Aligned_cols=36  Identities=28%  Similarity=0.281  Sum_probs=33.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..|+.++|+|+++++|.++++.+...|++|++++++
T Consensus       143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~  178 (325)
T cd08253         143 KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASS  178 (325)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence            368899999999999999999999999999999887

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.16  E-value=0.078  Score=43.90  Aligned_cols=45  Identities=27%  Similarity=0.294  Sum_probs=36.5

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSL  123 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l  123 (147)
                      -.|+++.|+|.+ |+|....+.....|++|+.++++++-.+..++|
T Consensus       165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l  209 (339)
T COG1064         165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL  209 (339)
T ss_pred             CCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh
Confidence            368999999998 999998888888999999999994444444444

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=95.12  E-value=0.07  Score=43.57  Aligned_cols=36  Identities=14%  Similarity=0.124  Sum_probs=32.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      -.|.+++|+|+++++|...++.....|++|+.++++
T Consensus       157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~  192 (348)
T PLN03154        157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS  192 (348)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCC
Confidence            368899999999999999998888899999888776

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=95.12  E-value=0.075  Score=42.46  Aligned_cols=35  Identities=14%  Similarity=0.165  Sum_probs=31.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .|.+++|+|+++++|..+++.....|++|+.++++
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s  172 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGS  172 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCC
Confidence            57899999999999999998888899999988877

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.06  E-value=0.074  Score=42.88  Aligned_cols=42  Identities=21%  Similarity=0.360  Sum_probs=36.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      ..++||.++|-|+++=.|+.++..|...|+.|.++.+. +.+.
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L~  197 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNLP  197 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhHH
Confidence            46899999999997779999999999999999999886 4443

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=94.98  E-value=0.093  Score=41.32  Aligned_cols=36  Identities=31%  Similarity=0.358  Sum_probs=33.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..++.++|+|+++++|.++++.+...|++|++++++
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~  200 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGS  200 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence            467899999999999999999999999999998887

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.97  E-value=0.1  Score=42.18  Aligned_cols=41  Identities=27%  Similarity=0.437  Sum_probs=36.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      +++||.++|-|.+.-+|+.++..|..+|+.|.++... ..+.
T Consensus       154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~  195 (285)
T PRK14191        154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLS  195 (285)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHH
Confidence            6899999999999999999999999999999998766 4443

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=94.91  E-value=0.11  Score=34.25  Aligned_cols=40  Identities=35%  Similarity=0.491  Sum_probs=30.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCC---CEEEEe-ecC-hhHHHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAG---DNVIIC-SRS-ERVDSAVQS  122 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~G---a~Vvi~-~r~-~~~~~~~~~  122 (147)
                      |+.+|  |++.+|.+++..|.+.|   .+|.+. +|+ ++.++..++
T Consensus         1 kI~iI--G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~   45 (96)
T PF03807_consen    1 KIGII--GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKE   45 (96)
T ss_dssp             EEEEE--STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHH
T ss_pred             CEEEE--CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHh
Confidence            34566  77999999999999999   899965 888 655554433

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=94.88  E-value=0.1  Score=41.24  Aligned_cols=36  Identities=31%  Similarity=0.362  Sum_probs=32.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      -.+..++|+|+++++|.++++.+...|++|+++.++
T Consensus       161 ~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~  196 (332)
T cd08259         161 KKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRS  196 (332)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCC
Confidence            357789999999999999999999999999988877

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.83  E-value=0.069  Score=45.11  Aligned_cols=35  Identities=20%  Similarity=0.354  Sum_probs=32.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +.+|.++|+|.+ |+|.++++.|++.|++|++.|..
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~   37 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAE   37 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCC
Confidence            568999999986 99999999999999999999977

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=94.81  E-value=0.11  Score=41.27  Aligned_cols=36  Identities=22%  Similarity=0.303  Sum_probs=32.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      -.|..++|+|+++++|..+++.....|++|+.++++
T Consensus       142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s  177 (329)
T cd08294         142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGS  177 (329)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCC
Confidence            367899999999999999998888899999888776

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.81  E-value=0.094  Score=42.42  Aligned_cols=43  Identities=23%  Similarity=0.390  Sum_probs=38.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      +++||.++|.|.+.=+|+.++..|..+|+.|.++... ..+++.
T Consensus       156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~  199 (285)
T PRK10792        156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHH  199 (285)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHH
Confidence            6899999999999999999999999999999999887 555443

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=94.80  E-value=0.23  Score=40.99  Aligned_cols=36  Identities=31%  Similarity=0.480  Sum_probs=31.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      .++++.|+|-|+ +|+|..+++.|++.|. ++.++|++
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D   57 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRD   57 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            578888999987 7899999999999995 78888886

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.79  E-value=0.17  Score=43.11  Aligned_cols=48  Identities=23%  Similarity=0.316  Sum_probs=36.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLRE  125 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~  125 (147)
                      .+++|.++|.|+ +++|.++|..|.+.|.+|++.+++  +......+.+.+
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~   62 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA   62 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH
Confidence            467889999997 779999999999999999999876  233333444543

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=94.79  E-value=0.15  Score=38.24  Aligned_cols=41  Identities=29%  Similarity=0.491  Sum_probs=31.2

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHH
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLR  124 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~  124 (147)
                      +-|-|+ +-+|..+|..++..|.+|.+.|++ +.+++..+.+.
T Consensus         2 V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~   43 (180)
T PF02737_consen    2 VAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE   43 (180)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred             EEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence            445566 899999999999999999999999 66655555444

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=94.74  E-value=0.11  Score=44.06  Aligned_cols=47  Identities=19%  Similarity=0.351  Sum_probs=38.8

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQSL  123 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~l  123 (147)
                      .++++|.++|-|+ ||+|..++..|+..|. +|+++.|+ +++++..+++
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~  225 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF  225 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence            3588999999998 9999999999999995 69999998 6665555443

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=94.71  E-value=0.045  Score=44.21  Aligned_cols=31  Identities=45%  Similarity=0.602  Sum_probs=29.9

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ++||||++=||.+++..|.+.|++|+++.|+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~   31 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRR   31 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcC
Confidence            5899999999999999999999999999999

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.65  E-value=0.1  Score=42.44  Aligned_cols=41  Identities=24%  Similarity=0.385  Sum_probs=36.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEee-cChhHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSERVD  117 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~-r~~~~~  117 (147)
                      .++||.++|-|.+.-+|..+|..|++.|+.|.+++ |+..++
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~  196 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLP  196 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHH
Confidence            68999999999999999999999999999999995 554443

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=94.62  E-value=0.12  Score=43.78  Aligned_cols=43  Identities=28%  Similarity=0.528  Sum_probs=36.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC-hhHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-ERVDSAV  120 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~-~~~~~~~  120 (147)
                      .+.++.++|.|+ |.+|..+++.|...| .+|++++|+ +.+.+..
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la  221 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLA  221 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence            478899999997 999999999999999 789999998 5554443

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK04148 hypothetical protein; Provisional

Probab=94.61  E-value=0.14  Score=36.91  Aligned_cols=56  Identities=13%  Similarity=0.129  Sum_probs=39.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      +++.+++-|.+  -|..+|..|.+.|.+|+.+|.++...   +...+.    .+.+..+|+.+..
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV---~~a~~~----~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAV---EKAKKL----GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHH---HHHHHh----CCeEEECcCCCCC
Confidence            45678888887  66778889999999999999994432   222222    2567778877653

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=94.53  E-value=0.03  Score=44.05  Aligned_cols=30  Identities=13%  Similarity=0.281  Sum_probs=26.1

Q ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           84 LITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        84 vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +||||++-||..+++.|++.|.+|+++.+.
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~   30 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH   30 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc
Confidence            589999999999999999999987765443

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=94.53  E-value=0.1  Score=42.73  Aligned_cols=34  Identities=26%  Similarity=0.341  Sum_probs=28.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |.+++|+||++|+|....+-....|+.++++..+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s  176 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSS  176 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecC
Confidence            8999999999999999999888899665555444

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=94.45  E-value=0.14  Score=48.78  Aligned_cols=35  Identities=26%  Similarity=0.403  Sum_probs=31.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCC----CEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAG----DNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~G----a~Vvi~~r~  113 (147)
                      ..+.++|||+++.||..++..|++.|    .+|++..|.
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~ 1008 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRA 1008 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECc
Confidence            35789999999999999999999887    788888887

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=94.45  E-value=0.13  Score=39.39  Aligned_cols=36  Identities=25%  Similarity=0.362  Sum_probs=32.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +++||.++|-|| +.+|..-++.|++.|++|++++.+
T Consensus         6 ~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~   41 (205)
T TIGR01470         6 NLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEE   41 (205)
T ss_pred             EcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCC
Confidence            588999999998 778999999999999999999876

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=94.45  E-value=0.17  Score=38.85  Aligned_cols=41  Identities=34%  Similarity=0.529  Sum_probs=34.0

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQS  122 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~  122 (147)
                      .+.|.||++.+|..++..|++.|.+|++.+|+ +..++..++
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            47788988999999999999999999999998 665554443

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.41  E-value=0.13  Score=41.16  Aligned_cols=43  Identities=23%  Similarity=0.272  Sum_probs=34.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHHH
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQSL  123 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~l  123 (147)
                      +|.++|-|+ +|-+++++..|++.|+ +|.+++|+ +++++..+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            467888886 9999999999999997 59999999 6666665443

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.40  E-value=0.13  Score=41.64  Aligned_cols=43  Identities=19%  Similarity=0.330  Sum_probs=38.0

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      ..++||.++|.|.+.=+|+.++..|..+|+.|.+++.. ..+.+
T Consensus       160 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~  203 (287)
T PRK14176        160 VDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKK  203 (287)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHH
Confidence            36899999999999999999999999999999999876 55544

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=94.38  E-value=0.051  Score=36.93  Aligned_cols=36  Identities=28%  Similarity=0.333  Sum_probs=31.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +++||.++|.|| +.+|..-++.|++.|++|.+++..
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~   39 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPE   39 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESS
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCc
Confidence            588999999999 899999999999999999998876

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.35  E-value=0.13  Score=41.53  Aligned_cols=42  Identities=21%  Similarity=0.326  Sum_probs=37.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      +++||.++|-|.+.-+|+.++..|.++|+.|.++... ..+.+
T Consensus       154 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~  196 (281)
T PRK14183        154 DVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKA  196 (281)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence            6899999999999999999999999999999988766 54543

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.32  E-value=0.13  Score=43.89  Aligned_cols=36  Identities=19%  Similarity=0.337  Sum_probs=33.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+.||+++|.|. +.||..+++.+...|++|++++++
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~d  244 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVD  244 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCC
Confidence            478999999998 689999999999999999999988

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.32  E-value=0.16  Score=39.68  Aligned_cols=36  Identities=33%  Similarity=0.423  Sum_probs=32.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+++++|+|+++++|..+.+.+...|++|++++++
T Consensus       143 ~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~  178 (328)
T cd08268         143 RPGDSVLITAASSSVGLAAIQIANAAGATVIATTRT  178 (328)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCC
Confidence            357899999999999999999999999999998877

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=94.30  E-value=0.088  Score=43.08  Aligned_cols=62  Identities=11%  Similarity=0.090  Sum_probs=43.0

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCC--EEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGD--NVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga--~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.++||||++=||...++.+....-  +|+.+|.-  ..-.+.+..+.   +.....+.+.|+.|.+.+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~---~~~~~~fv~~DI~D~~~v   66 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVE---DSPRYRFVQGDICDRELV   66 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhh---cCCCceEEeccccCHHHH
Confidence            3689999999999999999998764  36666654  21122233443   334678888899887654

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=94.28  E-value=0.16  Score=42.96  Aligned_cols=45  Identities=24%  Similarity=0.435  Sum_probs=36.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQS  122 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~  122 (147)
                      ++.++.++|.|+ |++|..++..|...|+ +|++++|+ +.+.+..++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~  225 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE  225 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence            478899999987 9999999999999997 79999998 555544433

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=94.27  E-value=0.15  Score=40.61  Aligned_cols=32  Identities=44%  Similarity=0.586  Sum_probs=29.6

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .++|||++|-||.++...|...|.+|+..+|.
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~   33 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS   33 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch
Confidence            58999999999999999999999999988766

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=94.23  E-value=0.17  Score=42.98  Aligned_cols=40  Identities=18%  Similarity=0.223  Sum_probs=34.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      .+.|++++|.|++ .||+.+++.+...|++|++++++ .+++
T Consensus       199 ~l~GktVvViG~G-~IG~~va~~ak~~Ga~ViV~d~d~~R~~  239 (413)
T cd00401         199 MIAGKVAVVAGYG-DVGKGCAQSLRGQGARVIVTEVDPICAL  239 (413)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECChhhHH
Confidence            4789999999994 89999999999999999999988 4433

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=94.23  E-value=0.19  Score=40.62  Aligned_cols=37  Identities=30%  Similarity=0.391  Sum_probs=33.8

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+.++.++|.|. +++|+.++..|...|++|++.+|+
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~  184 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARK  184 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECC
Confidence            3568999999998 679999999999999999999999

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=94.21  E-value=0.17  Score=37.58  Aligned_cols=38  Identities=34%  Similarity=0.270  Sum_probs=33.6

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ...+.||++.|-|. +.||+++|+.+...|++|+..++.
T Consensus        31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~   68 (178)
T PF02826_consen   31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRS   68 (178)
T ss_dssp             BS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESS
T ss_pred             ccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEeccc
Confidence            45789999999987 899999999999999999999999

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.20  E-value=0.14  Score=41.36  Aligned_cols=42  Identities=24%  Similarity=0.422  Sum_probs=37.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      ++.||.++|-|.+.=+|+.++..|..+|+.|.++... ..+.+
T Consensus       155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~  197 (285)
T PRK14189        155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAA  197 (285)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHH
Confidence            6899999999999999999999999999999988766 54443

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=94.18  E-value=0.15  Score=37.46  Aligned_cols=36  Identities=28%  Similarity=0.296  Sum_probs=32.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +++||.++|-|| +.+|...++.|.+.|++|.+++..
T Consensus        10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~   45 (157)
T PRK06719         10 NLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPE   45 (157)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCc
Confidence            689999999998 789999999999999999988643

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.18  E-value=0.18  Score=40.79  Aligned_cols=42  Identities=14%  Similarity=0.343  Sum_probs=37.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      +++||.++|-|.+.=+|+.++..|..+|+.|.+++.. ..+++
T Consensus       155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~  197 (284)
T PRK14190        155 DISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAE  197 (284)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHH
Confidence            6899999999999999999999999999999998766 44443

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.14  E-value=0.24  Score=39.71  Aligned_cols=40  Identities=20%  Similarity=0.339  Sum_probs=31.2

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQS  122 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~  122 (147)
                      .+-|-|+ +-+|..+|..++..|.+|++.|++ +.+++..+.
T Consensus         7 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~   47 (286)
T PRK07819          7 RVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNR   47 (286)
T ss_pred             EEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHH
Confidence            3444455 799999999999999999999999 666554443

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.12  E-value=0.16  Score=41.19  Aligned_cols=43  Identities=19%  Similarity=0.321  Sum_probs=37.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      +++||.++|-|.+.=+|+.++..|..+|+.|.++... ..+++.
T Consensus       152 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~  195 (287)
T PRK14173        152 PLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAV  195 (287)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence            6899999999999999999999999999999998777 555443

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=94.03  E-value=0.37  Score=38.88  Aligned_cols=46  Identities=15%  Similarity=0.203  Sum_probs=36.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-h---hHHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-E---RVDSAVQSL  123 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~---~~~~~~~~l  123 (147)
                      .+++|.++|-|+ +|-+++++..|+..|+ +|.+.+|+ +   ++++..+++
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~  171 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRV  171 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHh
Confidence            468899999997 6779999999999996 79999998 3   444444444

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=94.01  E-value=0.071  Score=43.45  Aligned_cols=65  Identities=20%  Similarity=0.145  Sum_probs=46.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH---HHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA---VQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~---~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+++|||-++--|.=+++.|++.|+.|..+.|+ ......   +.++... +...+.+...|++|..+.
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~-~~~~l~l~~gDLtD~~~l   70 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHL-NDPRLHLHYGDLTDSSNL   70 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceecccccc-CCceeEEEeccccchHHH
Confidence            6899999999999999999999999999988887 221111   1122111 233477888888887654

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.00  E-value=0.17  Score=40.96  Aligned_cols=44  Identities=16%  Similarity=0.274  Sum_probs=38.6

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      .+++||.++|-|.+.=+|+.++..|..+|+.|.+++.. ..+++.
T Consensus       155 i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~  199 (284)
T PRK14177        155 IDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSI  199 (284)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence            36899999999999999999999999999999999876 555443

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=93.97  E-value=0.38  Score=39.20  Aligned_cols=47  Identities=17%  Similarity=0.354  Sum_probs=39.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCC--EEEEeecC-hhHHHHHHHHHHH
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRS-ERVDSAVQSLREE  126 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga--~Vvi~~r~-~~~~~~~~~l~~~  126 (147)
                      .++.+.|.|+ +++|..++..|+..|.  ++++.|++ +.++....++...
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~   54 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHA   54 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhh
Confidence            5678999998 9999999999998885  79999999 6677777777654

>TIGR00518 alaDH alanine dehydrogenase

Probab=93.94  E-value=0.22  Score=41.50  Aligned_cols=40  Identities=28%  Similarity=0.316  Sum_probs=33.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      +.++.++|.|+ +.+|+..++.+...|++|++++++ +++++
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~  205 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQ  205 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHH
Confidence            45667888877 789999999999999999999998 54443

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PLN02494 adenosylhomocysteinase

Probab=93.91  E-value=0.18  Score=43.56  Aligned_cols=36  Identities=25%  Similarity=0.331  Sum_probs=33.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+.||+++|.|.+ .||+.+++.+...|++|++++++
T Consensus       251 ~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~d  286 (477)
T PLN02494        251 MIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEID  286 (477)
T ss_pred             ccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCC
Confidence            4789999999995 99999999999999999999887

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=93.90  E-value=0.3  Score=40.99  Aligned_cols=62  Identities=29%  Similarity=0.309  Sum_probs=42.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHC-CCEEEEeecChhHHHHHHHHHHH---------hCCceEEEEeccccch
Q 032098           81 YNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSERVDSAVQSLREE---------FGEQHVCVTWQHSAAL  142 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~-Ga~Vvi~~r~~~~~~~~~~l~~~---------~~~~~v~~~~~Dvs~~  142 (147)
                      +.+++|||++=+|.-+..+|+.. -++|++.-|.+..+...+.|.+.         .....+.++..|++.+
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~   72 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEP   72 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccc
Confidence            46899999999998888888765 47999988873333333333332         2345678888888743

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=93.89  E-value=0.22  Score=38.77  Aligned_cols=36  Identities=28%  Similarity=0.288  Sum_probs=32.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..++.++|+|+++++|..+.+.+...|++|+++.++
T Consensus       138 ~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~  173 (325)
T TIGR02824       138 KAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGS  173 (325)
T ss_pred             CCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCC
Confidence            367899999999999999999999999999988877

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=93.86  E-value=1.1  Score=32.10  Aligned_cols=45  Identities=20%  Similarity=0.423  Sum_probs=37.0

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCC--CEEEEeecC-hhHHHHHHHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRS-ERVDSAVQSLREE  126 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~-~~~~~~~~~l~~~  126 (147)
                      .+.|.|+++.+|..++..|...+  .++++.|++ +.++....++...
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~   49 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHA   49 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhh
Confidence            57899999999999999999876  569999999 6666666666543

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.85  E-value=0.19  Score=40.63  Aligned_cols=42  Identities=19%  Similarity=0.324  Sum_probs=37.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      .++||.++|-|.+.=+|+.++..|.++||.|.++... ..+.+
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~  197 (282)
T PRK14180        155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKS  197 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHH
Confidence            6899999999999999999999999999999999876 54544

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.85  E-value=0.19  Score=40.51  Aligned_cols=43  Identities=19%  Similarity=0.379  Sum_probs=38.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      .++||.++|-|.+.=+|+.++..|..+|+.|.+++.+ ..+.+.
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~  198 (278)
T PRK14172        155 DIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEV  198 (278)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence            6899999999999999999999999999999999876 555443

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.72  E-value=0.2  Score=40.51  Aligned_cols=44  Identities=14%  Similarity=0.258  Sum_probs=38.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      .+++||.++|-|.+.=+|+.++..|.++|+.|.++... ..+.+.
T Consensus       153 i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~  197 (284)
T PRK14170        153 TQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQV  197 (284)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence            36899999999999999999999999999999998776 545443

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=93.72  E-value=0.53  Score=38.83  Aligned_cols=36  Identities=36%  Similarity=0.488  Sum_probs=31.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      .+..+.++|-|+ +|+|..+++.|++.|. +|.++|.+
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            577788888888 8999999999999996 89999876

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.70  E-value=0.21  Score=40.31  Aligned_cols=43  Identities=19%  Similarity=0.254  Sum_probs=37.6

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      .++||.++|-|.+.=+|+.++..|..+|+.|.++... ..+++.
T Consensus       153 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~  196 (282)
T PRK14169        153 DVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQL  196 (282)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHH
Confidence            6899999999999999999999999999999998765 555443

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=93.64  E-value=0.17  Score=38.81  Aligned_cols=36  Identities=19%  Similarity=0.193  Sum_probs=34.1

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEee
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS  111 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~  111 (147)
                      ..++||.++|-|.+.=+|+.++..|..+||.|.+++
T Consensus        58 ~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~   93 (197)
T cd01079          58 NRLYGKTITIINRSEVVGRPLAALLANDGARVYSVD   93 (197)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEe
Confidence            369999999999999999999999999999999996

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=93.64  E-value=0.25  Score=39.96  Aligned_cols=35  Identities=20%  Similarity=0.336  Sum_probs=30.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      ..|++++|+|+ +++|...++.+...|+ +|++++++
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~  203 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVS  203 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCC
Confidence            46889999986 8999999988888898 58888887

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=93.63  E-value=0.19  Score=43.45  Aligned_cols=37  Identities=19%  Similarity=0.315  Sum_probs=33.8

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+.||+++|.|.+ .||+.+|+.+...|++|++++++
T Consensus       250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~d  286 (476)
T PTZ00075        250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEID  286 (476)
T ss_pred             CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCC
Confidence            36899999999986 59999999999999999999877

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.62  E-value=0.39  Score=38.29  Aligned_cols=39  Identities=23%  Similarity=0.405  Sum_probs=30.9

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQ  121 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~  121 (147)
                      .+.|-|+ +.+|..++..|+..|.+|++.|++ +.++...+
T Consensus         6 kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~   45 (292)
T PRK07530          6 KVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGLA   45 (292)
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            4445554 889999999999999999999999 65555443

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=93.51  E-value=0.27  Score=39.68  Aligned_cols=44  Identities=20%  Similarity=0.484  Sum_probs=35.8

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCC--CEEEEeecC-hhHHHHHHHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRS-ERVDSAVQSLREE  126 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~-~~~~~~~~~l~~~  126 (147)
                      .+.|-|+ +++|..++..|+..|  .+|+++|++ +.++....++...
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~   48 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDA   48 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHH
Confidence            4667785 899999999999999  589999999 6677777777544

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK08655 prephenate dehydrogenase; Provisional

Probab=93.51  E-value=0.23  Score=42.33  Aligned_cols=35  Identities=29%  Similarity=0.449  Sum_probs=31.2

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERV  116 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~  116 (147)
                      .+.|.||.++||..++..|...|.+|++.+|+ +..
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~   37 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKG   37 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHH
Confidence            47889999999999999999999999999998 443

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.49  E-value=0.24  Score=40.35  Aligned_cols=43  Identities=21%  Similarity=0.261  Sum_probs=37.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      .++||.++|-|.+.=+|+.++..|..+|+.|.++... ..+++.
T Consensus       155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~  198 (297)
T PRK14186        155 DIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASI  198 (297)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence            6899999999999999999999999999999998766 545443

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=93.45  E-value=0.26  Score=39.95  Aligned_cols=38  Identities=18%  Similarity=0.277  Sum_probs=32.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERV  116 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~  116 (147)
                      -.|..++|.|+ +++|..+++.+...|++|++++++ +++
T Consensus       165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~  203 (349)
T TIGR03201       165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKL  203 (349)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHH
Confidence            45889999999 999999999988999999988887 443

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.44  E-value=0.25  Score=39.96  Aligned_cols=43  Identities=23%  Similarity=0.388  Sum_probs=38.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      +++||.++|-|.+.=+|+.++..|..+|+.|.++... ..+++.
T Consensus       154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~  197 (282)
T PRK14166        154 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLY  197 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence            6899999999999999999999999999999998877 555443

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=93.44  E-value=0.18  Score=42.17  Aligned_cols=64  Identities=17%  Similarity=0.291  Sum_probs=52.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHH----CCCEEEEeecC-hhHHHHHHHHHHHhCC--ceEEEEeccccchhhh
Q 032098           82 NVLITGSTKGIGYALAKEFLK----AGDNVIICSRS-ERVDSAVQSLREEFGE--QHVCVTWQHSAALSRH  145 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~----~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~--~~v~~~~~Dvs~~~~~  145 (147)
                      -+||-||++=-|.-+++++.+    .|-.+.+.+|+ +++++.++++.+..+.  ....+..+|++|+++.
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl   77 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASL   77 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHH
Confidence            478999999999999999998    78889999999 9999999998877653  2233778898887764

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.43  E-value=0.21  Score=40.39  Aligned_cols=41  Identities=15%  Similarity=0.268  Sum_probs=35.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      .++||.++|-|.++=+|+.++..|+++|+.|.++... +.++
T Consensus       155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~  196 (284)
T PRK14179        155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLA  196 (284)
T ss_pred             CCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHH
Confidence            6899999999999999999999999999999998544 4333

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=93.40  E-value=0.24  Score=40.32  Aligned_cols=44  Identities=16%  Similarity=0.231  Sum_probs=38.5

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      -.++||.++|-|.+.=+|+.++..|..+|+.|.++... ..+++.
T Consensus       163 i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~~  207 (299)
T PLN02516        163 IPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPESI  207 (299)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence            36899999999999999999999999999999999776 545443

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.40  E-value=0.24  Score=40.24  Aligned_cols=44  Identities=14%  Similarity=0.165  Sum_probs=38.6

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      -.++||.++|-|.+.=+|+.++..|..+|+.|.+++.. ..+.+.
T Consensus       156 i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~  200 (294)
T PRK14187        156 RNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADY  200 (294)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHH
Confidence            36899999999999999999999999999999998877 555443

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=93.39  E-value=0.3  Score=37.04  Aligned_cols=35  Identities=34%  Similarity=0.442  Sum_probs=31.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .++..++|+|+++ +|.++++.+...|.+|++++++
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~  167 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRS  167 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCC
Confidence            4678999999988 9999999999999999999887

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.38  E-value=0.24  Score=40.13  Aligned_cols=42  Identities=31%  Similarity=0.438  Sum_probs=37.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      +++||.++|-|.+.=+|+.++..|..+|+.|.++... ..+.+
T Consensus       156 ~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~  198 (288)
T PRK14171        156 NLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSS  198 (288)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            6899999999999999999999999999999998766 55544

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=93.26  E-value=0.7  Score=35.15  Aligned_cols=36  Identities=31%  Similarity=0.407  Sum_probs=31.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      .+.++.++|-|. +|+|..+++.|+..|. ++.++|.+
T Consensus        18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence            577788888885 8999999999999995 78888876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=93.25  E-value=0.35  Score=39.11  Aligned_cols=35  Identities=23%  Similarity=0.207  Sum_probs=30.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      -.|..++|.|+ +++|...++.....|++|++++++
T Consensus       164 ~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~  198 (329)
T TIGR02822       164 PPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRG  198 (329)
T ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCC
Confidence            35889999997 899998888777889999988888

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=93.25  E-value=0.35  Score=31.59  Aligned_cols=37  Identities=27%  Similarity=0.545  Sum_probs=32.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHC-CCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~-Ga~Vvi~~r~  113 (147)
                      .++++|.++|-|. +++|..++..|.+. +.+|.+.+|+
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~rd   56 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDRD   56 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            3578899999999 99999999999998 6788888874

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=93.23  E-value=0.33  Score=39.38  Aligned_cols=44  Identities=27%  Similarity=0.451  Sum_probs=35.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC-hhHHHHHHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-ERVDSAVQS  122 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~-~~~~~~~~~  122 (147)
                      +.++.++|-|+ |.||..+++.|...| .+|++++|+ ++..+..++
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~  221 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKE  221 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Confidence            67889999987 999999999999876 578899998 555554443

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=93.17  E-value=0.52  Score=41.90  Aligned_cols=29  Identities=34%  Similarity=0.227  Sum_probs=26.4

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEE
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVI  108 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vv  108 (147)
                      .+.++|||+++-||..+++.|...|.+|.
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~  408 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYE  408 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEE
Confidence            34799999999999999999999999984

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=93.12  E-value=0.093  Score=41.36  Aligned_cols=27  Identities=26%  Similarity=0.393  Sum_probs=21.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAG  104 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~G  104 (147)
                      ..+|++++||+++|||..++..+..++
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~aed   30 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILAED   30 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHhcc
Confidence            457899999999999977777665554

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.06  E-value=0.31  Score=39.41  Aligned_cols=43  Identities=16%  Similarity=0.200  Sum_probs=37.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      .++||.++|-|.+.=+|+.++..|.++|+.|.++... ..+++.
T Consensus       154 ~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~~~  197 (282)
T PRK14182        154 DPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAGE  197 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence            5899999999999999999999999999999998877 555443

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=93.04  E-value=0.31  Score=37.81  Aligned_cols=31  Identities=42%  Similarity=0.469  Sum_probs=27.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+.-+|++-||.+++++|+..|++|++..|+
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r   33 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSR   33 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCC
Confidence            3456788999999999999999999999777

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=92.98  E-value=0.4  Score=38.18  Aligned_cols=39  Identities=28%  Similarity=0.315  Sum_probs=30.5

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQ  121 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~  121 (147)
                      .+.|-| ++-+|..+|..|+..|.+|++.|++ +.+++..+
T Consensus         5 kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~   44 (287)
T PRK08293          5 NVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKE   44 (287)
T ss_pred             EEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence            344445 4889999999999999999999999 55555443

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=92.83  E-value=0.41  Score=37.84  Aligned_cols=35  Identities=29%  Similarity=0.381  Sum_probs=31.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+..++|.|+++++|..+++.....|++|++++++
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~  180 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGK  180 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecC
Confidence            36799999999999999999999999999988877

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=92.82  E-value=0.4  Score=37.93  Aligned_cols=35  Identities=17%  Similarity=0.252  Sum_probs=32.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+..++|.|+++++|..+++.+...|++|+.++++
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~  179 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGS  179 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Confidence            57899999999999999999999999999888876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=92.82  E-value=0.29  Score=40.86  Aligned_cols=43  Identities=12%  Similarity=0.170  Sum_probs=38.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      +++||.++|-|.+.=+|+.++..|.++|+.|.++... ..+++.
T Consensus       228 ~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~  271 (364)
T PLN02616        228 EIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEI  271 (364)
T ss_pred             CCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHHH
Confidence            6899999999999999999999999999999999877 555544

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=92.79  E-value=0.42  Score=37.36  Aligned_cols=36  Identities=31%  Similarity=0.369  Sum_probs=32.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..|..++|.|+++++|..+++.....|++|+.++++
T Consensus       131 ~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~  166 (305)
T cd08270         131 LLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGS  166 (305)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCC
Confidence            358899999999999999999999999999998877

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PLN00203 glutamyl-tRNA reductase

Probab=92.76  E-value=0.34  Score=42.35  Aligned_cols=45  Identities=27%  Similarity=0.437  Sum_probs=37.6

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQS  122 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~  122 (147)
                      ++.++.++|-|+ |++|..++..|...|+ +|+++.|+ +.+++..++
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~  309 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREE  309 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH
Confidence            378899999999 9999999999999996 69999999 665554443

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=92.73  E-value=0.41  Score=37.13  Aligned_cols=36  Identities=31%  Similarity=0.424  Sum_probs=32.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+..++|+|+++++|..+++.+...|++|++++++
T Consensus       138 ~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~  173 (323)
T cd08241         138 QPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASS  173 (323)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCC
Confidence            367899999999999999999999999999988876

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=92.70  E-value=0.45  Score=36.75  Aligned_cols=37  Identities=30%  Similarity=0.387  Sum_probs=32.5

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+++||.++|.|| |..|..=++.|++.|++|++..-.
T Consensus         8 ~~l~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~   44 (210)
T COG1648           8 LDLEGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPE   44 (210)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCC
Confidence            3689999999998 678888999999999999988765

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.70  E-value=0.38  Score=38.83  Aligned_cols=43  Identities=21%  Similarity=0.421  Sum_probs=38.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      .++||.++|.|.+.-.|+.++..|...|+.|.++.++ ..+++.
T Consensus       149 ~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~  192 (279)
T PRK14178        149 SIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAE  192 (279)
T ss_pred             CCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHH
Confidence            6899999999999999999999999999999999887 444433

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=92.65  E-value=0.32  Score=40.39  Aligned_cols=43  Identities=9%  Similarity=0.157  Sum_probs=37.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      .++||.++|-|.+.=+|+.++..|.++|+.|.++... ..+++.
T Consensus       211 ~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~~  254 (345)
T PLN02897        211 EIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQI  254 (345)
T ss_pred             CCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHHHH
Confidence            6899999999999999999999999999999998876 544443

>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]

Probab=92.64  E-value=0.3  Score=39.46  Aligned_cols=43  Identities=28%  Similarity=0.408  Sum_probs=38.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      ++.||.++|-|.|.=.|+.++..|+..++.|.++... ..+.+.
T Consensus       153 ~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~~  196 (283)
T COG0190         153 DLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLASI  196 (283)
T ss_pred             CCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHHH
Confidence            6899999999999999999999999999999999877 444443

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=92.51  E-value=0.69  Score=35.87  Aligned_cols=36  Identities=33%  Similarity=0.700  Sum_probs=29.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      .++|-|+ +-+|..+|+.|.+.|.+|++++++ +..++
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~   38 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEE   38 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHH
Confidence            3555555 789999999999999999999999 44443

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=92.47  E-value=0.5  Score=36.81  Aligned_cols=36  Identities=25%  Similarity=0.301  Sum_probs=31.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEE-Eeec
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVI-ICSR  112 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vv-i~~r  112 (147)
                      ..+.++.+.|.| .+.+|..+++.|.+.|++|+ +.|.
T Consensus        27 ~~l~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D~   63 (227)
T cd01076          27 IGLAGARVAIQG-FGNVGSHAARFLHEAGAKVVAVSDS   63 (227)
T ss_pred             CCccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence            357888999987 59999999999999999988 7776

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=92.47  E-value=0.54  Score=37.87  Aligned_cols=37  Identities=32%  Similarity=0.378  Sum_probs=30.6

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      .+.|.| .+-+|..++..|++.|.+|++.+++ +..+..
T Consensus         4 ~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~   41 (308)
T PRK06129          4 SVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAA   41 (308)
T ss_pred             EEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHH
Confidence            467778 5679999999999999999999999 545443

>cd08230 glucose_DH Glucose dehydrogenase

Probab=92.45  E-value=0.45  Score=38.61  Aligned_cols=35  Identities=26%  Similarity=0.296  Sum_probs=30.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..|+.++|.|+ +++|...++.+...|++|++++++
T Consensus       171 ~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~  205 (355)
T cd08230         171 WNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR  205 (355)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            36788999985 899999998888899999999883

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=92.41  E-value=0.48  Score=38.03  Aligned_cols=39  Identities=23%  Similarity=0.360  Sum_probs=30.4

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQ  121 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~  121 (147)
                      .+-|-|+ +-+|..++..|+..|.+|++.+++ +.+++..+
T Consensus         6 ~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~   45 (311)
T PRK06130          6 NLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALERARG   45 (311)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence            3444455 779999999999999999999998 55555544

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=92.40  E-value=1.3  Score=34.86  Aligned_cols=36  Identities=25%  Similarity=0.397  Sum_probs=30.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~  113 (147)
                      .++.+.++|-|. +|+|..+++.|+..| .++.++|.+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            577888888888 999999999999999 468887765

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=92.38  E-value=0.44  Score=37.45  Aligned_cols=35  Identities=29%  Similarity=0.356  Sum_probs=29.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCE-EEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~-Vvi~~r~  113 (147)
                      ..|++++|.|+ ++||..+++.+...|++ |++++++
T Consensus       119 ~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~  154 (280)
T TIGR03366       119 LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPS  154 (280)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            36888999986 89999999988888987 7777766

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=92.36  E-value=0.44  Score=40.42  Aligned_cols=36  Identities=19%  Similarity=0.264  Sum_probs=33.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+.||+++|-|. +.||+.+++.+...|++|++++++
T Consensus       192 ~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~d  227 (406)
T TIGR00936       192 LIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVD  227 (406)
T ss_pred             CCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCC
Confidence            478999999997 779999999999999999999887

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.33  E-value=0.43  Score=38.59  Aligned_cols=43  Identities=14%  Similarity=0.308  Sum_probs=37.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHH--CCCEEEEeecC-hhHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLK--AGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~--~Ga~Vvi~~r~-~~~~~~  119 (147)
                      +++||.++|-|.+.=+|+.++..|.+  +++.|.++... ..+++.
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~~~  200 (284)
T PRK14193        155 ELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLAAH  200 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHHHH
Confidence            68999999999999999999999998  79999998877 544443

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=92.32  E-value=0.48  Score=37.96  Aligned_cols=35  Identities=23%  Similarity=0.173  Sum_probs=30.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCE-EEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~-Vvi~~r~  113 (147)
                      ..|..++|+|+ +++|...++.+...|++ |++++++
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~  197 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPS  197 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            45889999976 89999999998899999 8888877

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=92.25  E-value=0.57  Score=36.86  Aligned_cols=35  Identities=29%  Similarity=0.365  Sum_probs=32.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+..++|+|+++++|..+.+.+...|++|+.++++
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~  176 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGG  176 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            57789999999999999999999999999888876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=92.17  E-value=0.46  Score=40.97  Aligned_cols=36  Identities=19%  Similarity=0.383  Sum_probs=30.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCC---CEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAG---DNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~G---a~Vvi~~r~  113 (147)
                      +++|+++||||+|.+|+.+.+.|++.-   -++.+.-|.
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~   48 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRA   48 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEec
Confidence            789999999999999999999999764   256676665

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=92.14  E-value=0.6  Score=37.18  Aligned_cols=38  Identities=21%  Similarity=0.360  Sum_probs=31.3

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAV  120 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~  120 (147)
                      .+.|-|+ +-+|..+|..|++.|.+|++.|++ +.+++..
T Consensus         3 ~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~   41 (288)
T PRK09260          3 KLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQ   41 (288)
T ss_pred             EEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH
Confidence            4566666 889999999999999999999999 6555544

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=92.13  E-value=0.57  Score=38.44  Aligned_cols=36  Identities=17%  Similarity=0.173  Sum_probs=28.4

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      .+-|-| ++-||..+|..|+..|.+|++.|++ +.++.
T Consensus         9 ~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~~   45 (321)
T PRK07066          9 TFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAEAA   45 (321)
T ss_pred             EEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence            344444 4779999999999999999999998 54443

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=92.09  E-value=0.33  Score=37.74  Aligned_cols=36  Identities=25%  Similarity=0.528  Sum_probs=32.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC---EEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD---NVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga---~Vvi~~r~  113 (147)
                      .++++.++|-|+ +|.|..++..|...|.   +|++++|+
T Consensus        22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            578889999998 9999999999999997   59999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=92.05  E-value=0.4  Score=39.74  Aligned_cols=35  Identities=26%  Similarity=0.345  Sum_probs=28.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEee
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICS  111 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~  111 (147)
                      .-+|++++|.||++|+|....+-....| .+|+.++
T Consensus       155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~  190 (347)
T KOG1198|consen  155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTAC  190 (347)
T ss_pred             cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEc
Confidence            3578899999999999999999888889 4444443

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=92.01  E-value=0.57  Score=37.14  Aligned_cols=36  Identities=28%  Similarity=0.185  Sum_probs=32.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..|..++|.|+++++|.++++.....|++|+.+.++
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~  173 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSS  173 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCc
Confidence            467899999999999999999888899999888776

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=91.97  E-value=1.4  Score=33.84  Aligned_cols=36  Identities=25%  Similarity=0.371  Sum_probs=30.6

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      .++.+.++|-|+ +|+|..+++.|++.|. ++.+.|.+
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            467778888886 8999999999999996 48888776

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=91.92  E-value=0.59  Score=36.84  Aligned_cols=36  Identities=22%  Similarity=0.158  Sum_probs=31.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..|..++|.|+++++|.++++.....|++|+++..+
T Consensus       138 ~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~  173 (324)
T cd08292         138 KPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRR  173 (324)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecC
Confidence            357899999999999999999999999999887766

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=91.82  E-value=0.66  Score=36.51  Aligned_cols=34  Identities=29%  Similarity=0.372  Sum_probs=30.6

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +..++|.|+++++|..+++.....|++|++++++
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~  180 (325)
T cd05280         147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGK  180 (325)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCC
Confidence            4589999999999999999888899999888877

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.80  E-value=0.55  Score=38.08  Aligned_cols=43  Identities=21%  Similarity=0.275  Sum_probs=37.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHC----CCEEEEeecC-hhHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKA----GDNVIICSRS-ERVDSA  119 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~----Ga~Vvi~~r~-~~~~~~  119 (147)
                      .++||.++|-|.+.=+|+.++..|.++    ++.|.++... ..+++.
T Consensus       150 ~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~~~  197 (287)
T PRK14181        150 PLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLTEI  197 (287)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHHHH
Confidence            689999999999999999999999998    7999998866 555443

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=91.76  E-value=0.63  Score=38.31  Aligned_cols=36  Identities=33%  Similarity=0.373  Sum_probs=32.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..|..++|+|+++++|.++++.....|+++++++++
T Consensus       192 ~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s  227 (393)
T cd08246         192 KPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSS  227 (393)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCC
Confidence            357899999999999999999888999998888776

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.72  E-value=0.57  Score=37.96  Aligned_cols=43  Identities=16%  Similarity=0.242  Sum_probs=37.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHH----CCCEEEEeecC-hhHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLK----AGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~----~Ga~Vvi~~r~-~~~~~~  119 (147)
                      +++||.++|-|.+.=+|+.++..|..    +++.|.++..+ ..+.+.
T Consensus       154 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~  201 (286)
T PRK14184        154 SPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEE  201 (286)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHH
Confidence            68999999999999999999999998    89999998877 444443

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=91.70  E-value=0.51  Score=38.63  Aligned_cols=34  Identities=26%  Similarity=0.250  Sum_probs=29.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .|++++|.|+ ++||..+++.....|++|++++.+
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~  216 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSS  216 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            6788999665 899999999888899998887766

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=91.68  E-value=0.62  Score=38.55  Aligned_cols=36  Identities=31%  Similarity=0.350  Sum_probs=31.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..|..++|.|+++++|..+++.+...|++|++++++
T Consensus       188 ~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~  223 (398)
T TIGR01751       188 KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSS  223 (398)
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCC
Confidence            357899999999999999999888999998887766

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=91.62  E-value=0.79  Score=36.53  Aligned_cols=39  Identities=28%  Similarity=0.391  Sum_probs=30.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAV  120 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~  120 (147)
                      +.+.|-|+ +-+|..++..|+..|.+|++.|++ +.+++..
T Consensus         4 ~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~   43 (291)
T PRK06035          4 KVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEILKNAM   43 (291)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence            34555555 779999999999999999999999 5555433

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=91.58  E-value=0.71  Score=37.84  Aligned_cols=35  Identities=20%  Similarity=0.182  Sum_probs=29.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      -.|..++|.|+ ++||...++.....|+ +|++++++
T Consensus       184 ~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~  219 (368)
T TIGR02818       184 EEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDIN  219 (368)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            35788999975 8999999998888898 79888877

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=91.52  E-value=0.74  Score=35.93  Aligned_cols=36  Identities=33%  Similarity=0.395  Sum_probs=32.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      -.|..++|.|+++++|.++.+.....|++|+.+..+
T Consensus       141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~  176 (320)
T cd08243         141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRS  176 (320)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCC
Confidence            457899999999999999999999999999888776

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=91.51  E-value=0.49  Score=37.25  Aligned_cols=43  Identities=16%  Similarity=0.339  Sum_probs=35.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHCC----CEEEEeecC-hhHHHHHHHHHH
Q 032098           83 VLITGSTKGIGYALAKEFLKAG----DNVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~G----a~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      +.|.|+++.+|..++..|+..|    .+|++.|++ +.++....++..
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~   48 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQD   48 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHH
Confidence            3688998889999999999988    789999998 666666666644

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=91.47  E-value=0.38  Score=36.68  Aligned_cols=36  Identities=28%  Similarity=0.390  Sum_probs=31.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      .+..+.++|-|+ +|+|..++..|++.|. +|++.|.+
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            467778888888 8999999999999997 69988877

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=91.40  E-value=1.1  Score=35.66  Aligned_cols=37  Identities=19%  Similarity=0.249  Sum_probs=29.6

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      +.+-|-|+ +-+|..+|..|+..|.+|++.|++ +.+++
T Consensus         5 ~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~   42 (295)
T PLN02545          5 KKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDPAALSR   42 (295)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHH
Confidence            34445555 789999999999999999999999 55544

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=91.39  E-value=0.78  Score=35.44  Aligned_cols=36  Identities=28%  Similarity=0.316  Sum_probs=32.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..|..++|.|+++++|..+++.....|++|++++++
T Consensus       135 ~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~  170 (320)
T cd05286         135 KPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSS  170 (320)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCC
Confidence            467899999999999999999988999999888776

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=91.33  E-value=0.76  Score=36.22  Aligned_cols=36  Identities=33%  Similarity=0.346  Sum_probs=31.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..|..++|.|+++++|..+++.+...|++++++.++
T Consensus       139 ~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~  174 (334)
T PTZ00354        139 KKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSS  174 (334)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence            357899999999999999999999999998877766

>CHL00175 minD septum-site determining protein; Validated

Probab=91.32  E-value=0.31  Score=38.49  Aligned_cols=34  Identities=18%  Similarity=0.295  Sum_probs=30.2

Q ss_pred             CCeEEEeCCCChHHHHH-----HHHHHHCCCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYAL-----AKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~-----a~~La~~Ga~Vvi~~r~  113 (147)
                      +|++.|+++.+|.|+.+     |..|++.|.+|.++|.+
T Consensus        15 ~~vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~D   53 (281)
T CHL00175         15 SRIIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDAD   53 (281)
T ss_pred             ceEEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            67999999999999877     66788899999999888

>PRK14968 putative methyltransferase; Provisional

Probab=91.28  E-value=1.5  Score=31.90  Aligned_cols=60  Identities=22%  Similarity=0.089  Sum_probs=36.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCc-eEEEEecccc
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQ-HVCVTWQHSA  140 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~-~v~~~~~Dvs  140 (147)
                      .+++.++-.|++.|.   ++..++..+++|+.+|++ +.++.+.+.+....... .+.+...|..
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~   83 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLF   83 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccc
Confidence            366788888887776   455566668999999999 44454544443322111 1445555543

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=91.26  E-value=0.75  Score=36.67  Aligned_cols=34  Identities=24%  Similarity=0.238  Sum_probs=28.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +++++++||++++|...++.....|++|++++++
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~  177 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRR  177 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCC
Confidence            4566667999999999998888889999888777

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=91.18  E-value=0.67  Score=38.36  Aligned_cols=34  Identities=26%  Similarity=0.204  Sum_probs=29.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .|.+++|.|+ +++|...++.....|++|++++.+
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~  211 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRS  211 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCC
Confidence            5789999886 899999999888899999888776

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=91.17  E-value=0.74  Score=36.57  Aligned_cols=34  Identities=26%  Similarity=0.337  Sum_probs=29.4

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHC-CCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~-Ga~Vvi~~r~  113 (147)
                      |..++|.|+++++|..+++..... |++|+.+..+
T Consensus       149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~  183 (336)
T TIGR02817       149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASR  183 (336)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCc
Confidence            789999999999999988766666 9999888766

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=91.16  E-value=0.92  Score=36.07  Aligned_cols=35  Identities=29%  Similarity=0.360  Sum_probs=32.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+..++|.|+++.+|..+++.+...|++|++++++
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~  196 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSS  196 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCC
Confidence            57799999999999999999999999999888887

>TIGR01968 minD_bact septum site-determining protein MinD

Probab=91.13  E-value=0.34  Score=37.27  Aligned_cols=34  Identities=18%  Similarity=0.397  Sum_probs=29.4

Q ss_pred             CCeEEEeCCCChHHHHH-----HHHHHHCCCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYAL-----AKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~-----a~~La~~Ga~Vvi~~r~  113 (147)
                      +|++.|+++.+|.|+.+     |..|++.|.+|.++|.+
T Consensus         1 ~~ii~v~s~kGGvGKTt~a~~lA~~la~~g~~vlliD~D   39 (261)
T TIGR01968         1 ARVIVITSGKGGVGKTTTTANLGTALARLGKKVVLIDAD   39 (261)
T ss_pred             CeEEEEecCCCCccHHHHHHHHHHHHHHcCCeEEEEECC
Confidence            57999999999999865     56778889999999887

This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=91.02  E-value=0.69  Score=39.63  Aligned_cols=36  Identities=19%  Similarity=0.256  Sum_probs=31.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+.+|.++|-| .+|.|.++++.|.+.|++|.+.|++
T Consensus        12 ~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~   47 (473)
T PRK00141         12 QELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDN   47 (473)
T ss_pred             cccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCC
Confidence            46778888888 5889999999999999999999987

>PLN02740 Alcohol dehydrogenase-like

Probab=90.95  E-value=0.74  Score=37.92  Aligned_cols=35  Identities=23%  Similarity=0.229  Sum_probs=30.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      -.|..++|.|+ ++||...++.+...|+ +|++++++
T Consensus       197 ~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~  232 (381)
T PLN02740        197 QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDIN  232 (381)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCC
Confidence            46789999985 8999999998888998 58888887

>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.89  E-value=0.68  Score=37.69  Aligned_cols=44  Identities=14%  Similarity=0.206  Sum_probs=37.6

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHC----CCEEEEeecC-hhHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKA----GDNVIICSRS-ERVDSA  119 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~----Ga~Vvi~~r~-~~~~~~  119 (147)
                      ..++||.++|-|.+.=+|+.++..|..+    ++.|.++... ..+++.
T Consensus       157 i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T~~l~~~  205 (297)
T PRK14168        157 VETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRSKNLARH  205 (297)
T ss_pred             CCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCCcCHHHH
Confidence            3689999999999999999999999998    7999998776 544443

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=90.84  E-value=0.74  Score=37.31  Aligned_cols=38  Identities=16%  Similarity=0.299  Sum_probs=29.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHH-CC-CEEEEeecC-hhHH
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLK-AG-DNVIICSRS-ERVD  117 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~-~G-a~Vvi~~r~-~~~~  117 (147)
                      .|.+++|+|+ ++||...++.+.+ .| ++|++++++ ++++
T Consensus       163 ~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~  203 (341)
T cd08237         163 DRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLD  203 (341)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHH
Confidence            5789999996 9999998887765 44 679888888 4443

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]

Probab=90.83  E-value=0.46  Score=37.54  Aligned_cols=34  Identities=15%  Similarity=0.345  Sum_probs=29.6

Q ss_pred             CCeEEEeCCCChHHHHH-----HHHHHHCCCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYAL-----AKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~-----a~~La~~Ga~Vvi~~r~  113 (147)
                      +++++||-|.+|.|+.+     .-.|+..|.+|+++|-+
T Consensus         2 ~~iIVvTSGKGGVGKTTttAnig~aLA~~GkKv~liD~D   40 (272)
T COG2894           2 ARIIVVTSGKGGVGKTTTTANIGTALAQLGKKVVLIDFD   40 (272)
T ss_pred             ceEEEEecCCCCcCccchhHHHHHHHHHcCCeEEEEecC
Confidence            67999999999999754     55799999999999887

>PLN02869 fatty aldehyde decarbonylase

Probab=90.79  E-value=0.72  Score=41.00  Aligned_cols=45  Identities=20%  Similarity=0.319  Sum_probs=33.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHH
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLRE  125 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~  125 (147)
                      -|-++.||+++-+|+++|.+|+++|-++ ++-..|+.++...++..
T Consensus       448 ~~~vfl~G~~sK~~raia~~lc~r~i~~-~t~~~~~~~~~~~~~~~  492 (620)
T PLN02869        448 TTQVLFRGNLSKVAYFIASALCQRGIQV-ATFREDEYEKLNKKLPN  492 (620)
T ss_pred             CceEEEecCccHHHHHHHHHHHhcCCeE-eecCHHHHHHHHHhccc
Confidence            3578999999999999999999999883 22222555665555544

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.73  E-value=0.73  Score=37.53  Aligned_cols=43  Identities=14%  Similarity=0.349  Sum_probs=37.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHC----CCEEEEeecC-hhHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKA----GDNVIICSRS-ERVDSA  119 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~----Ga~Vvi~~r~-~~~~~~  119 (147)
                      .++||.++|-|.+.=+|+.++..|.++    ++.|.++... ..+++.
T Consensus       154 ~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l~~~  201 (297)
T PRK14167        154 DTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDLAAK  201 (297)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCHHHH
Confidence            589999999999999999999999988    8999998766 555443

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=90.61  E-value=0.59  Score=34.09  Aligned_cols=37  Identities=30%  Similarity=0.490  Sum_probs=28.4

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHH
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAV  120 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~  120 (147)
                      +-+-|- +-+|..+++.|++.|++|.+.+|+ +..++..
T Consensus         4 Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~   41 (163)
T PF03446_consen    4 IGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALA   41 (163)
T ss_dssp             EEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHH
T ss_pred             EEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhH
Confidence            334444 789999999999999999999999 5555544

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>smart00829 PKS_ER Enoylreductase

Probab=90.58  E-value=1.1  Score=34.00  Aligned_cols=36  Identities=28%  Similarity=0.335  Sum_probs=31.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..|..++|.|+.+++|..+++.....|++|+.++++
T Consensus       103 ~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~  138 (288)
T smart00829      103 RPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGS  138 (288)
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC
Confidence            357789999999999999998888899999888876

Enoylreductase in Polyketide synthases.

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=90.54  E-value=1  Score=36.10  Aligned_cols=35  Identities=26%  Similarity=0.273  Sum_probs=31.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+..++|.| ++++|..+++.+...|++|++++++
T Consensus       162 ~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~  196 (333)
T cd08296         162 KPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRG  196 (333)
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCC
Confidence            3578999999 7999999999888999999998887

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=90.50  E-value=0.81  Score=38.17  Aligned_cols=39  Identities=18%  Similarity=0.227  Sum_probs=30.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCC---EEEEeecC-hhHH
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGD---NVIICSRS-ERVD  117 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga---~Vvi~~r~-~~~~  117 (147)
                      .|..++|.|+++++|...++.+...|+   +|++++++ ++++
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~  217 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLA  217 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHH
Confidence            567899999999999998887666553   79888888 4443

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=90.48  E-value=1  Score=36.86  Aligned_cols=35  Identities=23%  Similarity=0.262  Sum_probs=30.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      -.|..++|.|+ +++|...++.+...|+ +|++++++
T Consensus       185 ~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~  220 (368)
T cd08300         185 EPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDIN  220 (368)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            35789999975 8999999999888999 68888887

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=90.48  E-value=1  Score=35.49  Aligned_cols=35  Identities=23%  Similarity=0.347  Sum_probs=31.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+..++|.|+++++|..+++.....|++|+++..+
T Consensus       146 ~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~  180 (324)
T cd08288         146 GDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGR  180 (324)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence            46799999999999999999888999999887665

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>PF01861 DUF43: Protein of unknown function DUF43; InterPro: IPR002723 This family of prokaryotic proteins have not been characterised

Probab=90.40  E-value=2  Score=33.99  Aligned_cols=65  Identities=17%  Similarity=0.131  Sum_probs=41.5

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccch
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      ..+|.||.+++-|--.-+..+++  |.....+|+++|.++++-+..++..++.+-. +.....|+.+.
T Consensus        40 ~gdL~gk~il~lGDDDLtSlA~a--l~~~~~~I~VvDiDeRll~fI~~~a~~~gl~-i~~~~~DlR~~  104 (243)
T PF01861_consen   40 RGDLEGKRILFLGDDDLTSLALA--LTGLPKRITVVDIDERLLDFINRVAEEEGLP-IEAVHYDLRDP  104 (243)
T ss_dssp             TT-STT-EEEEES-TT-HHHHHH--HHT--SEEEEE-S-HHHHHHHHHHHHHHT---EEEE---TTS-
T ss_pred             cCcccCCEEEEEcCCcHHHHHHH--hhCCCCeEEEEEcCHHHHHHHHHHHHHcCCc-eEEEEeccccc
Confidence            45799999999998888888777  4555689999999988878777777776654 88888888765

All the members are 350-400 amino acids long.; PDB: 2QM3_A.

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=90.31  E-value=0.75  Score=38.34  Aligned_cols=34  Identities=26%  Similarity=0.306  Sum_probs=31.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+.+.|-||.|.||..++..|.+.|..|.+.+++
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~  131 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD  131 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence            4678899999999999999999999999999986

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=90.27  E-value=1.2  Score=30.11  Aligned_cols=30  Identities=30%  Similarity=0.544  Sum_probs=25.2

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ++|-|. +.+|+.+++.|.+.+.+|++++.+
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d   30 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRD   30 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESS
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECC
Confidence            466777 579999999999977799999998

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.24  E-value=0.88  Score=37.00  Aligned_cols=43  Identities=12%  Similarity=0.291  Sum_probs=37.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHC----CCEEEEeecC-hhHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKA----GDNVIICSRS-ERVDSA  119 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~----Ga~Vvi~~r~-~~~~~~  119 (147)
                      .++||.++|-|.+.=+|+.++..|.++    ++.|.++... ..+.+.
T Consensus       154 ~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~nl~~~  201 (293)
T PRK14185        154 ETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSKNLKKE  201 (293)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCCCHHHH
Confidence            589999999999999999999999988    6999998766 555443

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=90.20  E-value=1.2  Score=35.59  Aligned_cols=36  Identities=25%  Similarity=0.211  Sum_probs=32.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+..++|.|+++++|.++++.+...|++|+++..+
T Consensus       164 ~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~  199 (341)
T cd08297         164 KPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVG  199 (341)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            357899999999999999999999999999998877

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.18  E-value=1.1  Score=36.50  Aligned_cols=43  Identities=19%  Similarity=0.327  Sum_probs=36.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHH----CCCEEEEeecC-hhHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLK----AGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~----~Ga~Vvi~~r~-~~~~~~  119 (147)
                      .++||.++|-|.+.=+|+.++..|.+    +|+.|.++..+ ..+++.
T Consensus       156 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~  203 (295)
T PRK14174        156 ETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSY  203 (295)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHH
Confidence            68999999999999999999999988    78999998877 444443

>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein

Probab=90.01  E-value=0.44  Score=38.59  Aligned_cols=36  Identities=17%  Similarity=0.196  Sum_probs=30.9

Q ss_pred             CCCCeEEEeCCCChHHHHH-----HHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYAL-----AKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~-----a~~La~~Ga~Vvi~~r~  113 (147)
                      -.+|++.|+|+.+|.|+.+     |..|++.|.+|+++|.+
T Consensus        91 ~~~~vIav~~~KGGvGkTT~a~nLA~~la~~g~~VlLvD~D  131 (322)
T TIGR03815        91 ARGVVVAVIGGRGGAGASTLAAALALAAARHGLRTLLVDAD  131 (322)
T ss_pred             CCceEEEEEcCCCCCcHHHHHHHHHHHHHhcCCCEEEEecC
Confidence            4689999999999999876     56777889999999877

Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=90.00  E-value=1.1  Score=35.20  Aligned_cols=36  Identities=19%  Similarity=0.130  Sum_probs=32.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..|..++|.|+++++|.++++.+...|++|+++..+
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~  172 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRR  172 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecC
Confidence            457799999999999999999999999999887766

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=89.98  E-value=0.66  Score=38.02  Aligned_cols=32  Identities=25%  Similarity=0.318  Sum_probs=28.4

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCC-------CEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAG-------DNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~G-------a~Vvi~~r~  113 (147)
                      .+.|||+++.+|..++..|+..+       .+|++.|++
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~   42 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIP   42 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcC
Confidence            58999999999999999999844       489999996

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02928 oxidoreductase family protein

Probab=89.95  E-value=0.75  Score=38.02  Aligned_cols=37  Identities=32%  Similarity=0.354  Sum_probs=34.1

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+.||++.|-|. +.||+.+|+.|...|++|+..++.
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~  191 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRS  191 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            3689999999998 899999999999999999999886

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=89.95  E-value=1.1  Score=36.76  Aligned_cols=35  Identities=23%  Similarity=0.356  Sum_probs=29.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      ..|..++|.|+ +++|...++.+...|+ +|++++++
T Consensus       190 ~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~  225 (371)
T cd08281         190 RPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLN  225 (371)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCC
Confidence            35788999885 8999999888888899 58888877

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=89.93  E-value=1.2  Score=35.35  Aligned_cols=34  Identities=26%  Similarity=0.405  Sum_probs=27.8

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      +-|-|+ +-+|..++..|+..|.+|++.|++ +.++
T Consensus         6 I~VIG~-G~mG~~ia~~la~~g~~V~~~d~~~~~~~   40 (282)
T PRK05808          6 IGVIGA-GTMGNGIAQVCAVAGYDVVMVDISDAAVD   40 (282)
T ss_pred             EEEEcc-CHHHHHHHHHHHHCCCceEEEeCCHHHHH
Confidence            344444 889999999999999999999999 5554

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=89.89  E-value=0.67  Score=34.88  Aligned_cols=31  Identities=23%  Similarity=0.236  Sum_probs=24.0

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |+.||  |.+-+|+.+|..|+..|.+|+..|.+
T Consensus         2 ~I~Vi--GlGyvGl~~A~~lA~~G~~V~g~D~~   32 (185)
T PF03721_consen    2 KIAVI--GLGYVGLPLAAALAEKGHQVIGVDID   32 (185)
T ss_dssp             EEEEE----STTHHHHHHHHHHTTSEEEEE-S-
T ss_pred             EEEEE--CCCcchHHHHHHHHhCCCEEEEEeCC
Confidence            35555  67899999999999999999999998

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=89.86  E-value=1.3  Score=31.34  Aligned_cols=30  Identities=40%  Similarity=0.584  Sum_probs=25.7

Q ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEeecCh
Q 032098           84 LITGSTKGIGYALAKEFLKAGDNVIICSRSE  114 (147)
Q Consensus        84 vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~  114 (147)
                      .|-|+ ++||.-+|..|.+.|.+|.+++|.+
T Consensus         2 ~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~   31 (151)
T PF02558_consen    2 LIIGA-GAIGSLYAARLAQAGHDVTLVSRSP   31 (151)
T ss_dssp             EEEST-SHHHHHHHHHHHHTTCEEEEEESHH
T ss_pred             EEECc-CHHHHHHHHHHHHCCCceEEEEccc
Confidence            34444 7899999999999999999999875

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=89.82  E-value=4.2  Score=26.86  Aligned_cols=57  Identities=21%  Similarity=0.161  Sum_probs=37.0

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHH--CCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccc
Q 032098           80 PYNVLITGSTKGIGYALAKEFLK--AGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHS  139 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~--~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dv  139 (147)
                      ++.++--|++.|.   ++..|++  .|++|+.+|.+ +.++.+.+.+.+......+.+...|+
T Consensus         2 ~~~vLDlGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~   61 (112)
T PF12847_consen    2 GGRVLDLGCGTGR---LSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDA   61 (112)
T ss_dssp             TCEEEEETTTTSH---HHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCC
T ss_pred             CCEEEEEcCcCCH---HHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECcc
Confidence            5667777776652   2333344  78999999999 55555555543333445788888888

...

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=89.79  E-value=1.2  Score=36.37  Aligned_cols=35  Identities=23%  Similarity=0.193  Sum_probs=29.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      -.|.+++|.|+ +++|...++.+...|+ +|++++++
T Consensus       186 ~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~  221 (369)
T cd08301         186 KKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLN  221 (369)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            35788999985 8999999988888998 79888877

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC

Probab=89.76  E-value=1.4  Score=38.36  Aligned_cols=38  Identities=24%  Similarity=0.417  Sum_probs=31.0

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAV  120 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~  120 (147)
                      .+-|-|+ +-+|..||..|+..|.+|++.+++ +.+++..
T Consensus         7 kV~VIGa-G~MG~gIA~~la~aG~~V~l~d~~~e~l~~~~   45 (503)
T TIGR02279         7 TVAVIGA-GAMGAGIAQVAASAGHQVLLYDIRAEALARAI   45 (503)
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence            4555566 789999999999999999999999 6665543

This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=89.76  E-value=1.2  Score=37.94  Aligned_cols=47  Identities=28%  Similarity=0.477  Sum_probs=40.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC-hhHHHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-ERVDSAVQSLR  124 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~-~~~~~~~~~l~  124 (147)
                      ++++|.++|-|+ |-+|.-++.+|++.| .+|+++.|+ ++++++.+++.
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            489999999998 679999999999999 678899999 88877776664

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=89.65  E-value=2.5  Score=32.55  Aligned_cols=36  Identities=25%  Similarity=0.358  Sum_probs=29.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      .+.++.++|-|+ +|+|..+++.|++.|. ++.++|.+
T Consensus        18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D   54 (228)
T cd00757          18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDD   54 (228)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            467778888885 8999999999999995 57776543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=89.63  E-value=1.2  Score=35.53  Aligned_cols=37  Identities=30%  Similarity=0.378  Sum_probs=32.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecCh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSE  114 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~  114 (147)
                      ..|..++|.|+++++|..+++.....|++|++++.++
T Consensus       176 ~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~  212 (350)
T cd08274         176 GAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA  212 (350)
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch
Confidence            3578999999999999999999999999988776543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=89.62  E-value=1.2  Score=35.32  Aligned_cols=34  Identities=21%  Similarity=0.207  Sum_probs=31.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~  113 (147)
                      |..++|.|+.+++|..+++.....| ++|++++.+
T Consensus       150 g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~  184 (336)
T cd08252         150 GKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASR  184 (336)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCC
Confidence            7899999999999999999999999 999888776

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=89.61  E-value=1  Score=37.82  Aligned_cols=35  Identities=26%  Similarity=0.590  Sum_probs=29.8

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      .++|.|+ +.+|..+++.|.+.|.+|++++++ +..+
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~   37 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLR   37 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHH
Confidence            4677787 999999999999999999999998 4433

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=89.59  E-value=1.3  Score=34.13  Aligned_cols=37  Identities=24%  Similarity=0.296  Sum_probs=32.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecCh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSE  114 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~  114 (147)
                      ..|+.++|.|+++++|.++++.+...|++|+++..++
T Consensus       143 ~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~  179 (309)
T cd05289         143 KAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA  179 (309)
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch
Confidence            4678999999999999999999999999998877554

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=89.51  E-value=1.5  Score=35.10  Aligned_cols=35  Identities=23%  Similarity=0.284  Sum_probs=30.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .|..++|+|+++++|.++++.....|++|++..++
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~  196 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST  196 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc
Confidence            38899999999999999999988999998877654

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=89.34  E-value=1.4  Score=34.71  Aligned_cols=36  Identities=31%  Similarity=0.429  Sum_probs=31.3

Q ss_pred             CCCC-eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPY-NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gk-v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..|. .++|.|+++++|..+++.....|++|+++..+
T Consensus       143 ~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~  179 (323)
T TIGR02823       143 TPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGK  179 (323)
T ss_pred             CCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCC
Confidence            3466 99999999999999999999999998877665

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=89.31  E-value=1.1  Score=36.20  Aligned_cols=36  Identities=22%  Similarity=0.159  Sum_probs=29.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      |+.+|  |.+.+|..++..|++.|.+|.+.+|+ +..+.
T Consensus         6 ~I~iI--G~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~   42 (328)
T PRK14618          6 RVAVL--GAGAWGTALAVLAASKGVPVRLWARRPEFAAA   42 (328)
T ss_pred             eEEEE--CcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence            45555  56899999999999999999999998 44433

>PRK13243 glyoxylate reductase; Reviewed

Probab=89.26  E-value=0.94  Score=37.18  Aligned_cols=37  Identities=24%  Similarity=0.191  Sum_probs=34.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+.||++.|-|. +.||..+|+.|...|++|+..++.
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~  182 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRT  182 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCC
Confidence            4689999999998 899999999999999999999887

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=89.25  E-value=1.2  Score=36.13  Aligned_cols=35  Identities=23%  Similarity=0.244  Sum_probs=29.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCE-EEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~-Vvi~~r~  113 (147)
                      -.|..++|.|+ +++|...++.....|++ |+.++++
T Consensus       175 ~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~  210 (358)
T TIGR03451       175 KRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDID  210 (358)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            35788999975 89999999988888985 8888777

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated

Probab=89.20  E-value=1.6  Score=37.93  Aligned_cols=42  Identities=19%  Similarity=0.338  Sum_probs=32.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSL  123 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l  123 (147)
                      +.+-|-|+ +-+|..||..|+..|.+|++.|++ +.+++..+.+
T Consensus         8 ~~V~VIGa-G~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i   50 (507)
T PRK08268          8 ATVAVIGA-GAMGAGIAQVAAQAGHTVLLYDARAGAAAAARDGI   50 (507)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence            34444565 789999999999999999999999 6666644333

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=89.16  E-value=1  Score=35.77  Aligned_cols=35  Identities=20%  Similarity=0.225  Sum_probs=28.5

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      +.+|  |.+-+|..++..|++.|.+|++.+|+ +..++
T Consensus         2 IgvI--G~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~   37 (291)
T TIGR01505         2 VGFI--GLGIMGSPMSINLAKAGYQLHVTTIGPEVADE   37 (291)
T ss_pred             EEEE--EecHHHHHHHHHHHHCCCeEEEEcCCHHHHHH
Confidence            4444  56899999999999999999999999 54443

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=89.15  E-value=0.83  Score=36.62  Aligned_cols=36  Identities=14%  Similarity=0.362  Sum_probs=30.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~  113 (147)
                      .+.+..++|-|+ +|+|..+++.|++.| .++.++|.+
T Consensus        27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            467777888876 799999999999999 778888765

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=89.12  E-value=3.1  Score=34.51  Aligned_cols=36  Identities=22%  Similarity=0.291  Sum_probs=30.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~  113 (147)
                      .++++.++|-|+ +|+|..+++.|+..| .++.++|.+
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D   61 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDD   61 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            477788888888 899999999999999 467777765

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=89.11  E-value=0.83  Score=35.84  Aligned_cols=36  Identities=31%  Similarity=0.431  Sum_probs=29.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~  113 (147)
                      .++++.++|-|+ +|+|..+++.|++.| .+++++|.+
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            467778888877 799999999999999 467787765

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=89.09  E-value=0.89  Score=34.94  Aligned_cols=32  Identities=31%  Similarity=0.444  Sum_probs=29.8

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+-|-|+++-.|..+.++...+|+.|+.+.|+
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn   33 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRN   33 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeC
Confidence            46678999999999999999999999999999

>PRK13265 glycine/sarcosine/betaine reductase complex protein A; Reviewed

Probab=88.98  E-value=3.5  Score=30.02  Aligned_cols=59  Identities=31%  Similarity=0.487  Sum_probs=43.1

Q ss_pred             CCCCCeEEEeCCCChH-HHHHHHHHHHCCCEEEEee------c-----ChhHHHHHHHHHHHhCCceEEEE
Q 032098           77 MLPPYNVLITGSTKGI-GYALAKEFLKAGDNVIICS------R-----SERVDSAVQSLREEFGEQHVCVT  135 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GI-G~~~a~~La~~Ga~Vvi~~------r-----~~~~~~~~~~l~~~~~~~~v~~~  135 (147)
                      .++||.++|-|--.|| |.++..-+-..|+.|+...      .     +-+-++.++++.+++|..++.+.
T Consensus         3 ~l~gKkviiiGdRDGiPgpAie~c~k~~gaevvfs~TECfVctaAGAMDLEnQ~Rvk~~aEk~g~eNvvVl   73 (154)
T PRK13265          3 LLEGKKVIIIGDRDGIPGPAIEECVKTTGAEVVFSSTECFVUTAAGAMDLENQKRVKDLAEKFGAENVVVI   73 (154)
T ss_pred             cccCcEEEEEecCCCCCcHHHHHHHhccCceEEEEeeeEEEeecccccchHHHHHHHHHHHhcCCccEEEE
Confidence            5799999999999998 7777777777899986321      1     12345667788888887665544

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=88.95  E-value=1.5  Score=35.50  Aligned_cols=34  Identities=24%  Similarity=0.281  Sum_probs=29.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      .|..++|+| ++++|..+++.+...|+ +|++++++
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~  211 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGS  211 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            688899997 59999999998889999 89888776

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional

Probab=88.94  E-value=1.1  Score=38.55  Aligned_cols=37  Identities=19%  Similarity=0.363  Sum_probs=32.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEE-EeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVI-ICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vv-i~~r~  113 (147)
                      .+++||+++|.|. +..|...|+.|.+.|++|+ +.|.+
T Consensus       233 ~~l~Gk~VaVqG~-GnVg~~aa~~L~e~GakVVavSD~~  270 (454)
T PTZ00079        233 DSLEGKTVVVSGS-GNVAQYAVEKLLQLGAKVLTMSDSD  270 (454)
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEcCC
Confidence            4689999999998 8899999999999999998 66655

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	147
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		2e-05
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		6e-05
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		7e-05
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		2e-04
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		3e-04
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		4e-04
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		4e-04

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHV 132
           +VL+TG TKGIG  +A  F +AG NV + +RS R  S+V +   E G  +V
Sbjct: 43  SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNV 93

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG 128
           +ITGS+ GIG A+A+ F K G ++++ +R  +R+  A +SL+E+FG
Sbjct: 11  VITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG 56

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG 128
           +ITGS+ GIG A+A+ F K G ++++ +R  +R+  A +SL+E+FG
Sbjct: 11  VITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG 56

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLR 124
           ++TG   GIG A+ KE L+ G NV+I SR  ER+ SA   L+
Sbjct: 22  IVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQ 63

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 78  LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSER-VDSAVQSLREE 126
           L     L+TG +KGIGYA+ +E    G  V  CSR+E+ +D  ++  RE+
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK 68

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 73  KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSER-VDSAVQSLREE 126
           +R+P L     L+T ST GIG+A+A+   + G +V++ SR ++ VD AV +L+ E
Sbjct: 9   RRDP-LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGE 62

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVII--CSRSERVDSAVQSLREEFG 128
           ML     ++TGST GIG A+A E  KAG +V+I    + E ++    +L  +FG
Sbjct: 1   MLKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFG 54

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	147
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	3e-13
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	5e-13
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	6e-13
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	4e-11
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	4e-11
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	6e-11
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	9e-11
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	1e-10
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	2e-10
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-10
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-10
1xq1_A	266	Putative tropinone reducatse; structural genomics,	3e-10
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	4e-10
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	5e-10
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	2e-09
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	2e-09
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	2e-09
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	2e-09
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-09
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	3e-09
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-09
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	3e-09
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	4e-09
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	5e-09
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	6e-09
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	7e-09
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	8e-09
3rih_A	293	Short chain dehydrogenase or reductase; structural	9e-09
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	1e-08
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	1e-08
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	1e-08
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	1e-08
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	1e-08
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	1e-08
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-08
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	1e-08
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-08
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	2e-08
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	3e-08
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	3e-08
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	3e-08
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	4e-08
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	4e-08
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	4e-08
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	4e-08
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	4e-08
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	5e-08
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	6e-08
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	6e-08
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	6e-08
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	6e-08
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	7e-08
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	7e-08
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	7e-08
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	7e-08
1spx_A	278	Short-chain reductase family member (5L265); paral	7e-08
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	7e-08
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	8e-08
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	9e-08
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	9e-08
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	9e-08
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	9e-08
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	1e-07
3cxt_A	291	Dehydrogenase with different specificities; rossma	1e-07
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	1e-07
1xhl_A	297	Short-chain dehydrogenase/reductase family member	1e-07
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-07
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	2e-07
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-07
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-07
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	2e-07
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-07
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	2e-07
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	2e-07
1xkq_A	280	Short-chain reductase family member (5D234); parra	2e-07
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	2e-07
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	2e-07
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	3e-07
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	3e-07
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	3e-07
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	3e-07
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	4e-07
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	5e-07
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	6e-07
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	6e-07
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	6e-07
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	6e-07
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	7e-07
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	7e-07
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	8e-07
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	8e-07
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	8e-07
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	9e-07
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	9e-07
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	1e-06
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	1e-06
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	1e-06
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	1e-06
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	1e-06
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	1e-06
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	2e-06
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	2e-06
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	2e-06
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-06
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	2e-06
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-06
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	2e-06
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	2e-06
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	2e-06
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-06
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	3e-06
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	3e-06
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	3e-06
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	4e-06
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	4e-06
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	4e-06
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	4e-06
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	4e-06
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	4e-06
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	5e-06
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	5e-06
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	5e-06
4e4y_A	244	Short chain dehydrogenase family protein; structur	5e-06
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	5e-06
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	5e-06
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	7e-06
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	7e-06
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	7e-06
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	8e-06
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	9e-06
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	1e-05
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	1e-05
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	1e-05
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	1e-05
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	1e-05
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	1e-05
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	1e-05
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	2e-05
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-05
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	2e-05
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	2e-05
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	2e-05
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	2e-05
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	3e-05
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	3e-05
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	3e-05
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	3e-05
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	4e-05
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	4e-05
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	5e-05
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	6e-05
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	6e-05
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	7e-05
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	7e-05
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	7e-05
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	7e-05
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	8e-05
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	9e-05
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-04
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	1e-04
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	1e-04
4dqx_A	277	Probable oxidoreductase protein; structural genomi	1e-04
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	2e-04
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-04
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	2e-04
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-04
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	3e-04
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	3e-04
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	3e-04
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	4e-04
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	5e-04
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	7e-04
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	7e-04

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 63.8 bits (156), Expect = 3e-13
 Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 6/80 (7%)

Query: 61  DSSSSSSSSSSVKREPMLPPYN-----VLITGSTKGIGYALAKEFLKAGDNVIICSRS-E 114
           ++ +  S   S  ++ MLPP +       ITG   G+G  +       G   +I SR  +
Sbjct: 2   NTEALQSKFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMD 61

Query: 115 RVDSAVQSLREEFGEQHVCV 134
            + +  + +  + G +   +
Sbjct: 62  VLKATAEQISSQTGNKVHAI 81

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 62.9 bits (154), Expect = 5e-13
 Identities = 21/53 (39%), Positives = 37/53 (69%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCV 134
            +ITGS+ GIG A+A+ F K G ++++ +R  +R+  A +SL+E+FG + + V
Sbjct: 10  AVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEV 62

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 63.0 bits (154), Expect = 6e-13
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHV 132
            L+TGST GIG A+A   +  G NV+I  R  E V+  ++ +R ++ +  +
Sbjct: 13  ALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAIL 63

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 57.9 bits (141), Expect = 4e-11
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCV 134
           L+TG +KGIGYA+ +E    G  V  CSR+ + +D  ++  RE+       V
Sbjct: 25  LVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSV 76

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 57.9 bits (141), Expect = 4e-11
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCV 134
           L+TG ++GIGY + +E    G +V  CSR+ + ++  +   R +  +    V
Sbjct: 13  LVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV 64

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 57.6 bits (140), Expect = 6e-11
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCV 134
             ITG   GIG+ +A+ F++ G + +I SRS  RV +A + L    G + + +
Sbjct: 30  AFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPL 82

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 57.1 bits (139), Expect = 9e-11
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
            L+T ST GIG A+A+   + G +V++ SR  E VD  V +L+ E   
Sbjct: 17  ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLS 64

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 56.9 bits (137), Expect = 1e-10
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQ 130
            ++TG  KGIG+ + K+    G  V++  R   +   AV+ L+    E 
Sbjct: 15  AVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHEN 63

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 56.4 bits (137), Expect = 2e-10
 Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 2/56 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEF-GEQHVCVTW 136
            ++T  + G+G+A A E  + G  +++ SR+ E++++A   +     G Q   V  
Sbjct: 10  AVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAG 65

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 55.6 bits (135), Expect = 2e-10
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
           V+ITG + G+G  +A  F K G  V+I  R+ E+++ A   + +  G+
Sbjct: 9   VIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQ 56

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 55.7 bits (135), Expect = 2e-10
 Identities = 9/51 (17%), Positives = 21/51 (41%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHV 132
           NV+   +  GIG   ++E +K      +        +A+  L+    + ++
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNI 57

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 55.6 bits (135), Expect = 3e-10
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSLREEFGEQHVCV 134
           L+TG TKGIG+A+ +EF   G  +  C+R+E  ++  +   +++  +    V
Sbjct: 18  LVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSV 69

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 55.4 bits (134), Expect = 4e-10
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 6/67 (8%)

Query: 69  SSSVKREPMLPPY-----NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQS 122
           +S  K    L P        ++TG   GIG A+ KE L+ G NV+I SR  ER+ SA   
Sbjct: 2   ASWAKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADE 61

Query: 123 LREEFGE 129
           L+     
Sbjct: 62  LQANLPP 68

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 54.5 bits (132), Expect = 5e-10
 Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 3/53 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVT 135
           +++TG+  G+G AL    ++ G  V +  R       +Q      G   + + 
Sbjct: 6   IIVTGAGSGLGRALTIGLVERGHQVSMMGRRY---QRLQQQELLLGNAVIGIV 55

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 53.5 bits (129), Expect = 2e-09
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 5/68 (7%)

Query: 68  SSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLK---AGDNVIICSRSERVDSAVQSLR 124
           SS  V R   +   ++LITG  +G+G  L K  L       ++    R+      ++ L 
Sbjct: 11  SSGLVPRGSHMN--SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA 68

Query: 125 EEFGEQHV 132
           +     H+
Sbjct: 69  KNHSNIHI 76

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVT 135
            LITG+TKGIG  +A+ F  AG  +++  R    +D+A ++L E+FG     V 
Sbjct: 23  ALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 53.0 bits (128), Expect = 2e-09
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG 128
           ++ITG++ G+G  LAK +   G    +  RS  ++ +    L    G
Sbjct: 4   IVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVG 50

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 1/46 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG 128
           L+TG ++G+G+ +A+   +AG +V++ SR+ E    A Q L E++G
Sbjct: 25  LVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG 70

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 53.0 bits (128), Expect = 3e-09
 Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 1/84 (1%)

Query: 52  SYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS 111
            +HS  +   + +    S   + +        L+TG   G+G  +A+     G +V+I  
Sbjct: 5   HHHSSGVDLGTENLYFQSMMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITG 64

Query: 112 RS-ERVDSAVQSLREEFGEQHVCV 134
           R  + +D+A   +    G     V
Sbjct: 65  RRPDVLDAAAGEIGGRTGNIVRAV 88

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 52.9 bits (128), Expect = 3e-09
 Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 5/70 (7%)

Query: 62  SSSSSSSSSSVKREPMLPPYNV-----LITGSTKGIGYALAKEFLKAGDNVIICSRSERV 116
           SS     + ++  + M  P+++     ++TG+  GIG A+A  + +AG +V+   R++ V
Sbjct: 8   SSGVDLGTENLYFQSMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV 67

Query: 117 DSAVQSLREE 126
                 + + 
Sbjct: 68  KEVADEIADG 77

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 52.5 bits (127), Expect = 3e-09
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 13/65 (20%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSER-------------VDSAVQSLREEFGEQ 130
           L+  +++GIG A+A    + G  V IC+R+E              +   +  L E+  E 
Sbjct: 23  LVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVKEV 82

Query: 131 HVCVT 135
            + V 
Sbjct: 83  DILVL 87

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 52.7 bits (127), Expect = 3e-09
 Identities = 10/53 (18%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVT 135
           +L+TG ++GIG ++         + ++   +      ++ L+E++G++   V 
Sbjct: 5   ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEA-PLKKLKEKYGDRFFYVV 56

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 52.1 bits (126), Expect = 4e-09
 Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSLREEFGEQHVCVTWQHSAA 141
           +L+TG+ +GIG A A+ +   G +V++  R+E  +      ++     Q + +      A
Sbjct: 17  ILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENA 76

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 52.2 bits (126), Expect = 5e-09
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEF-GEQHVCVT 135
            ++TG + GIG A  +  L+AG  V  C+R  ER+ +A  +LR+ F G +     
Sbjct: 11  AVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASV 65

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 51.8 bits (125), Expect = 6e-09
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
            L+TG   GIG  +A   + AG +V+I  R+ +++  AVQ L      
Sbjct: 14  YLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGAN 61

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 51.8 bits (125), Expect = 7e-09
 Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
            +ITG+++GIG  +A      G  V++ +RS + ++     +      
Sbjct: 10  AIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKH 57

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 51.6 bits (124), Expect = 8e-09
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKA-GDNVIICSRS-ERVDSAVQSLREEFGEQHV 132
            L+TG  KGIG A+ ++  +    +V++ +R   R  +AVQ L+ E      
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRF 58

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 51.5 bits (124), Expect = 9e-09
 Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 8/90 (8%)

Query: 53  YHSPIIRADSSSSSSSSSSVKREPMLPPY-------NVLITGSTKGIGYALAKEFLKAGD 105
           +H   + A +    S       EP            +VL+TG TKGIG  +A  F +AG 
Sbjct: 7   HHMGTLEAQTQGPGSMLVVESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGA 66

Query: 106 NVIICSRS-ERVDSAVQSLREEFGEQHVCV 134
           NV + +RS   + S    L E      + V
Sbjct: 67  NVAVAARSPRELSSVTAELGELGAGNVIGV 96

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 51.5 bits (124), Expect = 1e-08
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQ 130
            L+TG++ G G A+A+  + AGD VI  +R      A+  L   + ++
Sbjct: 8   WLVTGASSGFGRAIAEAAVAAGDTVIGTARRT---EALDDLVAAYPDR 52

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSLREEFGEQHVCVTWQHSAA 141
           +L+TG++ GIG   A  + + G  VI+  R+E ++      + EE G Q           
Sbjct: 15  ILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTC 74

Query: 142 LSRHYA 147
            S +  
Sbjct: 75  TSENCQ 80

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSR-SERVDSAVQSLREEFGEQHVCVT 135
            LITG++ GIG A A+     G  V I +R  E++ +    L     + HV   
Sbjct: 10  ALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLEL 63

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSR-SERVDSAVQSLREEFGEQHVCVT 135
           +LITG++ GIG  +A+E   AG  +++ +R   R+++    +R+  G     V 
Sbjct: 7   ILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVL 60

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
            ++ G T G+G A  +  ++ G  V++  R+E   S +  +REEFG +   +
Sbjct: 11  AIVIGGTHGMGLATVRRLVEGGAEVLLTGRNE---SNIARIREEFGPRVHAL 59

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVT 135
            +ITG+++GIG A+A+   + G  + + +RS +R++     L +E G +     
Sbjct: 5   AVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHH 58

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 12/49 (24%), Positives = 30/49 (61%), Gaps = 2/49 (4%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSERVDSAVQSLREE 126
           P +V++TG+ +GIG  L ++ +K  +  ++I  +R     + ++S+++ 
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDS 51

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHV 132
           L+TGS +G+G+A A+    AG  VI+       +  +V +L  +  + H 
Sbjct: 13  LVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHG 62

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 50.6 bits (122), Expect = 2e-08
 Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 17/85 (20%)

Query: 67  SSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------------- 113
           +++++   +P     +VL+TG  +GIG A+A+     G  V +  R              
Sbjct: 2   TATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVD 61

Query: 114 ----ERVDSAVQSLREEFGEQHVCV 134
               + VD A  ++ E  G   V V
Sbjct: 62  VTDSDAVDRAFTAVEEHQGPVEVLV 86

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 50.6 bits (122), Expect = 2e-08
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-SRSERVDSAVQSLREEFGEQHVCV 134
           V++TG TKGIG  +A  F +AG NV +    +  +D+ V  L +    + + V
Sbjct: 13  VVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGV 65

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 49.8 bits (120), Expect = 3e-08
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVT 135
           VLITG+++GIG A A+     G  V + +R       +Q+L  E         
Sbjct: 8   VLITGASRGIGEATARLLHAKGYRVGLMAR--DEK-RLQALAAELEGALPLPG 57

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 49.9 bits (120), Expect = 3e-08
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLRE 125
            L+TG ++GIG  +A+  L+AG  V IC+R  E        L  
Sbjct: 32  ALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA 75

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 49.9 bits (120), Expect = 3e-08
 Identities = 16/46 (34%), Positives = 28/46 (60%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFG 128
             +TGS+ GIG+A+A+ + +AG +V I   S   D   + L++ +G
Sbjct: 37  ASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYG 82

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 49.6 bits (119), Expect = 4e-08
 Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 32/115 (27%)

Query: 52  SYHSPIIRADSSSSSSSSSSVKREPM--LPPYNVLITGSTKGIGYALAKEFLKAGDNVII 109
           S H     +    +      + R  M        L+TG++ GIG A+A+  ++ G  V+ 
Sbjct: 2   SSHHHHHHSSGRENLYFQGHMARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVG 61

Query: 110 CSR-SER-----------------------------VDSAVQSLREEFGEQHVCV 134
           C+R                                 + S   ++R +     +C+
Sbjct: 62  CARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICI 116

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 49.5 bits (119), Expect = 4e-08
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG 128
           +++TG  +GIG A  +    AG NV +  RS        + + +EFG
Sbjct: 17  IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG 63

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 49.5 bits (118), Expect = 4e-08
 Identities = 10/54 (18%), Positives = 20/54 (37%), Gaps = 1/54 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCV 134
             ++   T  +G   A      G  V++C R  ++  +A  S+ + F       
Sbjct: 121 KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAA 174

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 49.5 bits (119), Expect = 4e-08
 Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 25/77 (32%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSR-SER------------------------VD 117
           VL+TG+T G G  + + F++ G  VI   R  ER                        ++
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIE 62

Query: 118 SAVQSLREEFGEQHVCV 134
             + SL  E+    + V
Sbjct: 63  EMLASLPAEWCNIDILV 79

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 49.2 bits (118), Expect = 5e-08
 Identities = 9/62 (14%), Positives = 19/62 (30%), Gaps = 16/62 (25%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSER----------------VDSAVQSLREE 126
           +L+ G +  +G  + K F     N I     E                 + S ++ +  +
Sbjct: 25  ILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSK 84

Query: 127 FG 128
             
Sbjct: 85  SI 86

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 49.2 bits (118), Expect = 6e-08
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 66  SSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSL 123
             SS  V R   +     ++TG+ K IG A+A +  + G  V+I   +  E   S    L
Sbjct: 9   HHSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADEL 68

Query: 124 REEFGEQHVCV 134
            +E     V  
Sbjct: 69  NKERSNTAVVC 79

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 49.1 bits (118), Expect = 6e-08
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
             L+TG+T GIG A+A+ F   G  V +    E     ++ +  + G+     
Sbjct: 29  KALVTGATGGIGEAIARCFHAQGAIVGLHGTRE---DKLKEIAADLGKDVFVF 78

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 49.1 bits (118), Expect = 6e-08
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
            ++TG  + IG A      +AG  VII          AV+ LR E  +
Sbjct: 16  AIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHD 63

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 49.0 bits (118), Expect = 6e-08
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
             LITG++ GIG A+A+   K G  VII   +E     ++SL     + +   
Sbjct: 16  TSLITGASSGIGSAIARLLHKLGSKVIISGSNE---EKLKSLGNALKDNYTIE 65

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 48.7 bits (117), Expect = 7e-08
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 22/74 (29%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSR-SER---------------------VDSAV 120
           V+ITG++ GIG A+A+ F + G  +++ +R  ER                      D+A+
Sbjct: 19  VVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAI 78

Query: 121 QSLREEFGEQHVCV 134
               + +G     V
Sbjct: 79  TRAEKIYGPADAIV 92

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 48.6 bits (117), Expect = 7e-08
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
             L+TG+++GIG A+A+   + G  VI  + SE   S  Q++ +  G+    +
Sbjct: 11  VALVTGASRGIGKAIAELLAERGAKVIGTATSE---SGAQAISDYLGDNGKGM 60

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 48.6 bits (117), Expect = 7e-08
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
           L+TG+ KGIG    K    +G  V+  +R+    S + SL +E        
Sbjct: 11  LVTGAGKGIGRDTVKALHASGAKVVAVTRTN---SDLVSLAKECPGIEPVC 58

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 48.7 bits (117), Expect = 7e-08
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSL 123
            +ITG+T GIG A AK F+  G  V I  R  + +D+A+  +
Sbjct: 32  AVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI 73

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 48.7 bits (117), Expect = 7e-08
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQ 137
            +ITGS+ GIG A A  F + G  V I  R  ER++   Q +      +    +  
Sbjct: 9   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 64

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 48.6 bits (117), Expect = 7e-08
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLRE 125
           VL+TG+ KGIG    +     G  V+  SR+   +DS V+    
Sbjct: 10  VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG 53

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 48.7 bits (117), Expect = 8e-08
 Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 18/70 (25%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC------------------SRSERVDSAVQSLR 124
           V +TG+ KGIGYA A  F++AG  V                     + + +V    Q L 
Sbjct: 10  VWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLL 69

Query: 125 EEFGEQHVCV 134
            E       V
Sbjct: 70  AETERLDALV 79

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 48.8 bits (117), Expect = 9e-08
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSLREEFGEQHVCVT 135
           V++TG++KGIG  +A    K G +V++ +RS+  +   V    E        + 
Sbjct: 31  VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIA 84

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 48.5 bits (116), Expect = 9e-08
 Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 6/52 (11%)

Query: 83  VLITGSTKGIGYALAKEFLK---AGDNVIICSRSERVDSAVQSLREEFGEQH 131
            ++TG+++G G ALA +  +    G  +++ +RSE   S ++ L+EE G Q 
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSE---SMLRQLKEELGAQQ 57

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 48.4 bits (116), Expect = 9e-08
 Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCV 134
           ML     ++TGST GIG  +A      G ++++        ++     L  + G + +  
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 48.3 bits (116), Expect = 9e-08
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 17/69 (24%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-----------------ERVDSAVQSLRE 125
           VL+TG  +GIG A+A+ F  AGD V I  RS                 E+V+ A + + E
Sbjct: 24  VLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLAVKCDITDTEQVEQAYKEIEE 83

Query: 126 EFGEQHVCV 134
             G   V +
Sbjct: 84  THGPVEVLI 92

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 65  SSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSL 123
             SS    +   M  P    +TG + GIG A+A+     G  V  C+R  + V +AV  L
Sbjct: 9   HHSSGLVPRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGL 68

Query: 124 REEFGE 129
           R    +
Sbjct: 69  RAAGHD 74

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 19/71 (26%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSER-------------------VDSAVQSL 123
           V+ITG+++GIG  L + +      V+  SRS +                    D  V+  
Sbjct: 31  VVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREG 90

Query: 124 REEFGEQHVCV 134
            E FG     V
Sbjct: 91  IERFGRIDSLV 101

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 48.0 bits (115), Expect = 1e-07
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQ 137
           V+ITGS+ GIG + A  F K G  V I  R+ +R++   Q + +            
Sbjct: 29  VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 84

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 48.0 bits (115), Expect = 1e-07
 Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 3/53 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVT 135
            LITG   G+G AL   F+  G  V +  +S      ++ L    G   V V 
Sbjct: 8   ALITGGASGLGRALVDRFVAEGARVAVLDKSA---ERLRELEVAHGGNAVGVV 57

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
            L+TGST GIG  +A+   +AG N+++    +   +   +     G + V  
Sbjct: 7   ALVTGSTSGIGLGIAQVLARAGANIVLNGFGD--PAPALAEIARHGVKAVHH 56

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVC 133
            +TG+  GIG  + + F  +G  +I+  R    +D A Q L      + V 
Sbjct: 15  AVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVA 65

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 24/102 (23%), Positives = 38/102 (37%), Gaps = 28/102 (27%)

Query: 60  ADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SER--- 115
           +       SS  V R   +    + ITG+T G G A A+ F +AG ++++  R  ER   
Sbjct: 2   SSHHHHHHSSGLVPRGSHMSS-TLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQA 60

Query: 116 -----------------------VDSAVQSLREEFGEQHVCV 134
                                  + +AV +L EEF      +
Sbjct: 61  LAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLI 102

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFG 128
            +ITGST GIG A+A+   KAG N+++      + + +    +     
Sbjct: 28  AVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSS 75

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSERVDSAVQSLREEFGEQHVCV 134
             L+TGST+GIG A+A++   AG  VII  +  ER  +  + +  ++G +   V
Sbjct: 9   VSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGV 62

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 47.3 bits (113), Expect = 2e-07
 Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
           V + G+   IG  +AK+F   G  V    R+ E++   V  +    G 
Sbjct: 10  VAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGR 57

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 3/52 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
           +L+TG+  GIG A    F + G +++   R E     +         + + V
Sbjct: 9   ILVTGAASGIGRAALDLFAREGASLVAVDREE---RLLAEAVAALEAEAIAV 57

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREE 126
           V+ITGS+ GIG   A  F + G NV I  RS ER++   Q + + 
Sbjct: 9   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKS 53

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 10/48 (20%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
           V+I+G    +G  LA+   + G ++++ +R+ ER++   + + +    
Sbjct: 14  VVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRR 61

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 47.8 bits (114), Expect = 2e-07
 Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 4/78 (5%)

Query: 37  TVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYAL 96
           +V  R    +L    +Y    +  D    S +S+     P+     V ITGS   +G AL
Sbjct: 108 SVSTRLPASTLTGMFAYRQTQLIEDLKFLSRTSTLFDGSPL----TVAITGSRGLVGRAL 163

Query: 97  AKEFLKAGDNVIICSRSE 114
             +    G  VI   R E
Sbjct: 164 TAQLQTGGHEVIQLVRKE 181

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 66  SSSSSSVKREPM--LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQS 122
            SS    +   M        L+TG+T GIG  +A+   K G  V +C+R  E + + ++ 
Sbjct: 6   HSSGLVPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKE 65

Query: 123 LREEFGE 129
           LRE   E
Sbjct: 66  LREAGVE 72

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 8/49 (16%), Positives = 17/49 (34%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHV 132
           ++T      G   A    +AG  V     S +    +++  E + +   
Sbjct: 5   IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKP 53

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 47.1 bits (113), Expect = 3e-07
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVT 135
            L+TG+ +GIG A+A      G  VI+   +       ++     G++   + 
Sbjct: 9   ALVTGAAQGIGKAIAARLAADGATVIVSDINA---EGAKAAAASIGKKARAIA 58

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 46.8 bits (112), Expect = 3e-07
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG 128
            L+TG+ +GIG A A+  L  G  V +   + E       +L E+F 
Sbjct: 10  ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE 56

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 46.9 bits (112), Expect = 4e-07
 Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 7/84 (8%)

Query: 53  YHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGD---NVII 109
           +HS  +    S  S    + +R   L    VLITG++ GIG A A E+L+A +    +I+
Sbjct: 9   HHSSFLVPRGSHMSQGRKAAER---LAKKTVLITGASAGIGKATALEYLEASNGDMKLIL 65

Query: 110 CSR-SERVDSAVQSLREEFGEQHV 132
            +R  E+++   +++ +EF    V
Sbjct: 66  AARRLEKLEELKKTIDQEFPNAKV 89

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 46.4 bits (111), Expect = 5e-07
 Identities = 12/71 (16%), Positives = 22/71 (30%), Gaps = 1/71 (1%)

Query: 65  SSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSERVDSAVQSL 123
            +  + +     M       +TG   G+G A+++    AG  V +  S      S     
Sbjct: 10  GTLEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMH 69

Query: 124 REEFGEQHVCV 134
             + G      
Sbjct: 70  ERDAGRDFKAY 80

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 46.4 bits (111), Expect = 6e-07
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
            L+TG+   IG A A    + G  + +   + E ++ A  S+RE+  E
Sbjct: 10  CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE 57

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 46.3 bits (111), Expect = 6e-07
 Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
            +ITG+  GIG  +A  F  AG +V++   + +  +  V  +++  G+
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 46.0 bits (110), Expect = 6e-07
 Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVT 135
            ++TG+++GIG A+A++    G  V++ +R  E++ +  + +    GE      
Sbjct: 32  AVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHAC 85

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 46.3 bits (110), Expect = 6e-07
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVT 135
           +LITG++ G G   A+    AG  V    R    R  S V+++     +  V + 
Sbjct: 8   ILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLR 62

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 46.0 bits (110), Expect = 7e-07
 Identities = 16/52 (30%), Positives = 28/52 (53%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
            L+TG+ +GIG  +AK   K+  +VI  SR+++   +V    + FG +    
Sbjct: 47  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGY 98

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 46.0 bits (110), Expect = 7e-07
 Identities = 14/58 (24%), Positives = 20/58 (34%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSA 140
            L+TG+  GIG A++      G  V  C            L    G +       H+A
Sbjct: 10  ALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAA 67

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 46.0 bits (110), Expect = 8e-07
 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 2/49 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGE 129
           V+ITGS+ G+G ++A  F      V++  RS  +  +S ++ +++  GE
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE 58

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 46.0 bits (110), Expect = 8e-07
 Identities = 16/82 (19%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 53  YHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR 112
           +H  +   ++ +    S        L     ++TG+++GIG A+A E  + G  VI  + 
Sbjct: 5   HHHHMGTLEAQTQGPGSMDK----TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTAT 60

Query: 113 SERVDSAVQSLREEFGEQHVCV 134
           +E     + +  ++ G +    
Sbjct: 61  TEAGAEGIGAAFKQAGLEGRGA 82

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 45.6 bits (109), Expect = 8e-07
 Identities = 17/75 (22%), Positives = 22/75 (29%), Gaps = 23/75 (30%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE-----------------------RVDSA 119
           VLITG+  GIG A  + F K G  ++ C   E                        V+  
Sbjct: 8   VLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERG 67

Query: 120 VQSLREEFGEQHVCV 134
                   G     V
Sbjct: 68  FAEALAHLGRLDGVV 82

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 45.6 bits (109), Expect = 9e-07
 Identities = 12/53 (22%), Positives = 26/53 (49%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
             L+TG+++GIG+ +A      G  V+  + S+      ++  +E G +   +
Sbjct: 7   VALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGL 59

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 45.6 bits (109), Expect = 9e-07
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVT 135
            ++TG +KGIG A+A+   KAG  V I         A Q++          V 
Sbjct: 15  AIVTGGSKGIGAAIARALDKAGATVAIADLDV---MAAQAVVAGLENGGFAVE 64

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 45.3 bits (108), Expect = 1e-06
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
            ++TG+  G+G A+A     AG  V +  R      A+Q    E G+  +CV
Sbjct: 31  AIVTGAGSGVGRAVAVALAGAGYGVALAGRRL---DALQETAAEIGDDALCV 79

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-SRSERVDSAVQSLREEFGEQHVCV 134
            LIT  TKG+G  + ++ L  G +V +           ++   ++  E+   V
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFV 62

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 45.5 bits (108), Expect = 1e-06
 Identities = 18/107 (16%), Positives = 38/107 (35%), Gaps = 12/107 (11%)

Query: 30  HCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGST 89
           H  + SS +  R +         +HS  +    S  ++ +  V           L+TG+ 
Sbjct: 6   HHHHHSSGLVPRGSHMGSSHHHHHHSSGLVPRGSHMTAPTVPV----------ALVTGAA 55

Query: 90  KGIGYALAKEFLKAGDNVIIC--SRSERVDSAVQSLREEFGEQHVCV 134
           K +G ++A+     G  V +     +   ++   +L        + V
Sbjct: 56  KRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 102

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 19/70 (27%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSER-------------------VDSAVQSLR 124
           L+TG ++GIG A+A+  +  G  V I SR+                         V+   
Sbjct: 6   LVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVPLPTDLEKDDPKGLVKRAL 65

Query: 125 EEFGEQHVCV 134
           E  G  HV V
Sbjct: 66  EALGGLHVLV 75

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
           V++TG+  GIG A+AK+F      V+      +R++  VQ LR    E
Sbjct: 10  VIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE 57

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREE 126
            LITG++ GIG  +A  + +AG  V + +R  + +      +   
Sbjct: 35  ALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV 79

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCV 134
            ++TG++ G G A+A  FL  GD V     S E ++   ++    + ++ + V
Sbjct: 5   AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRV 57

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-SRSERVDSAVQSLREEFGEQHVCV 134
           V++TG+++GIG A+A    KAG  V++  +RS +    V    E +G Q +  
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITF 56

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 83  VLITG-STKGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSLREEFGEQHVCV 134
           VL+T  +  GIG   A+  L  G +V+I    E R+      L +    +   V
Sbjct: 25  VLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAV 78

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 5/69 (7%)

Query: 62  SSSSSSSSSSVKREPM---LPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC--SRSERV 116
           SS     + ++  + M         ++TG  +GIG  +A+    +G ++ I     +E V
Sbjct: 8   SSGVDLGTENLYFQSMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGV 67

Query: 117 DSAVQSLRE 125
              +  L  
Sbjct: 68  APVIAELSG 76

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVD-SAVQSLREEFGEQHVCV 134
           VLITGS++GIG A A+ F +AG  V +  R    +     +     G      
Sbjct: 10  VLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFF 62

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
            ++TG+  GIG A+A  F KAG +V++     E  ++   ++R+  G+
Sbjct: 15  AIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK 62

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 17/63 (26%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-----------------SRSERVDSAVQSLRE 125
           V++TG++ GIG A+A+ F+  G  VI                   +  ++V +++  + +
Sbjct: 11  VIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFK 70

Query: 126 EFG 128
           E+G
Sbjct: 71  EYG 73

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 8/53 (15%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE---RVD----SAVQSLREEFG 128
           +L+ G++  +G A+ +  L+    VI   R      VD     +++ + E+ G
Sbjct: 6   ILLIGASGTLGSAVKER-LEKKAEVITAGRHSGDVTVDITNIDSIKKMYEQVG 57

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 3/52 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
            LITGS +GIG A A+ +++ G  V I           +    E G     V
Sbjct: 11  ALITGSARGIGRAFAEAYVREGATVAIADIDI---ERARQAAAEIGPAAYAV 59

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 3/60 (5%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC--SRSERVDSAVQSLREEFGEQHVCV 134
           M    + L+TG+++GIG ++A +  + G NV +      E+ ++ V+ + +  G     +
Sbjct: 1   MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEI-KAKGVDSFAI 59

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVII-CSRSERVDSAVQSLREEFGEQHVCV 134
             ++TGS++G+G A+A +    G N+++  S +     A     +  G   V  
Sbjct: 7   TAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVA 60

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 44.2 bits (105), Expect = 3e-06
 Identities = 12/64 (18%), Positives = 20/64 (31%), Gaps = 12/64 (18%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE------------RVDSAVQSLREEFGEQ 130
           ++I+G   GIG A  K    AG  ++     +            R  +    L +     
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGM 63

Query: 131 HVCV 134
              V
Sbjct: 64  DGLV 67

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
            +ITG   GIG A+A+ F   G ++ I           ++     G + + V
Sbjct: 10  AVITGGANGIGRAIAERFAVEGADIAIADLVP--APEAEAAIRNLGRRVLTV 59

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 44.1 bits (105), Expect = 4e-06
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSERVDSAVQSLREEFGEQHVCV 134
             L+TG+++GIG A+A E   AG  V +  + S      V +     G +   V
Sbjct: 30  IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAV 83

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 44.0 bits (105), Expect = 4e-06
 Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCV 134
            ++TGS  GIG A A+   + G  V++   + E  ++  + +  + G   + V
Sbjct: 12  GIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD-GGTAISV 63

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 43.7 bits (104), Expect = 4e-06
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 8/61 (13%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-------DNVIICSRS-ERVDSAVQSLREEFGEQHVCV 134
           +LITG+ KGIG A+A EF +A          +++ SR+   ++      R E        
Sbjct: 5   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 64

Query: 135 T 135
            
Sbjct: 65  A 65

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 43.6 bits (104), Expect = 4e-06
 Identities = 14/45 (31%), Positives = 23/45 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEF 127
           VL+TG  +GIG A+A+ F + G  V +C          +++   F
Sbjct: 9   VLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAF 53

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 43.7 bits (104), Expect = 4e-06
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGE 129
           V++TG  +GIG  + + F+ +G  V+IC + E   S  ++L +E   
Sbjct: 12  VVVTGGGRGIGAGIVRAFVNSGARVVICDKDE---SGGRALEQELPG 55

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 43.6 bits (104), Expect = 4e-06
 Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIIC--SRSERVDSAVQSLREEFGE 129
             LITG+++GIG A+A    + G  + I      E+ +   +  R     
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSP 52

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 43.6 bits (104), Expect = 5e-06
 Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSERVDSAVQSLREEFGEQHVCV 134
           ML     L+TG+++GIG A+A +  K G NV++  + +E+  + V    ++ G   + V
Sbjct: 1   MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAV 59

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSR-SERVDSAVQSLREEFGEQHVCV 134
           VLITG+  GIG   A EF K    +++       ++      +    + H  V
Sbjct: 34  VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 86

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 43.9 bits (104), Expect = 5e-06
 Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 2/54 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC--SRSERVDSAVQSLREEFGEQHVCV 134
            L+TG+ K +G ++A+     G  V +     +   ++   +L        + V
Sbjct: 12  ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 65

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 43.3 bits (103), Expect = 5e-06
 Identities = 11/33 (33%), Positives = 20/33 (60%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSE 114
           N L+TG +KGIG A+ +  L+  ++ +I    +
Sbjct: 6   NYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQ 38

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 43.7 bits (104), Expect = 5e-06
 Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 18/64 (28%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC------------------SRSERVDSAVQSLR 124
            ++TG + GIG A+    ++ G  V+                    +  E V  AV+   
Sbjct: 17  AIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTT 76

Query: 125 EEFG 128
           +++G
Sbjct: 77  KKYG 80

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 43.3 bits (103), Expect = 5e-06
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
            ++TG++ GIG A A  F + G  V++ +R+   +      +    GE
Sbjct: 11  AIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGE 58

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 43.3 bits (103), Expect = 7e-06
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 4/50 (8%)

Query: 83  VLITGS--TKGIGYALAKEFLKAGDNVIIC--SRSERVDSAVQSLREEFG 128
           V++TG+   KG+G   A+   + G  V I   SR++  +  V+ L + +G
Sbjct: 23  VVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYG 72

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 43.2 bits (102), Expect = 7e-06
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSR-SERVDSAVQSLREEFGEQHV 132
             +TG   G+G  L ++ L  G  V I     + +D A+ +L  E     V
Sbjct: 11  AFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEV 61

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREE 126
           +LITG+++ +G   A   L+ G  VII  R+E   ++V  LR+ 
Sbjct: 30  ILITGASQRVGLHCALRLLEHGHRVIISYRTEH--ASVTELRQA 71

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 42.9 bits (102), Expect = 8e-06
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
           VLITG   G+G A A      G  + +   S E ++++  ++ E   +
Sbjct: 16  VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPD 63

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 42.9 bits (102), Expect = 9e-06
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
            LITG+  G G  +AK F K G  V+I  R +   +  + +  E G+  + V
Sbjct: 12  ALITGAGSGFGEGMAKRFAKGGAKVVIVDRDK---AGAERVAGEIGDAALAV 60

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 42.6 bits (101), Expect = 1e-05
 Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
            LITG+  GIG A A      G  V    R+   V+     +    G+
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQ 78

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
            L+TG+ +GIG A+A   +K G  V I   +     +    + +  G 
Sbjct: 5   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH 52

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 9/73 (12%), Positives = 17/73 (23%), Gaps = 22/73 (30%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSER----------------------VDSAVQ 121
           L+T +    G A  +   + G  V+    S                         +  V 
Sbjct: 5   LVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIALAEQKPERLVD 64

Query: 122 SLREEFGEQHVCV 134
           +  +        V
Sbjct: 65  ATLQHGEAIDTIV 77

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII--CSRSERVDSAVQSLREEFGE 129
            L+TGS++G+G A A    + G N++I      +      + + +   +
Sbjct: 7   ALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK 55

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQ 130
           +++T + +GIG A A  F + G  VI    +E   S +Q L +  G Q
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINE---SKLQELEKYPGIQ 53

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQH 138
            +ITG T GIG A+A +F++ G  V+I  R        +   +  G       +QH
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHS---DVGEKAAKSVGTPDQIQFFQH 61

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE 129
            ++TG   GIG A A EF + G  +++       ++ AV  LR +  +
Sbjct: 34  AVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFD 81

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 19/99 (19%), Positives = 38/99 (38%), Gaps = 7/99 (7%)

Query: 35  SSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGY 94
            ST+RF      L A  +Y    +    ++ S+  +   +   L     ++TG+ +GIG 
Sbjct: 175 ESTMRFI-----LSAKSAYVDGQVFRVGAADSTPPADWDK--PLDGKVAVVTGAARGIGA 227

Query: 95  ALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVC 133
            +A+ F + G  V+        +   +   +  G     
Sbjct: 228 TIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTL 266

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 42.1 bits (100), Expect = 2e-05
 Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSERVDSAVQSLREEFGEQHVCV 134
             +TG   GIG ++ +   K G  V+  C  +          ++  G      
Sbjct: 16  AYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYAS 68

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREE 126
           V+ITG+  G+G   A+E  + G  VI+  R   + ++A +++  +
Sbjct: 19  VVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQ 63

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 2/54 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII--CSRSERVDSAVQSLREEFGEQHVCV 134
            +ITG  + IG+++A    + G  V++            V  L        V  
Sbjct: 14  AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLC 67

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* Length = 212

 Score = 41.8 bits (97), Expect = 2e-05
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 85  ITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAA 141
           + G T  +G  LA      G  +++ SR  E+ ++     R   G+  +       AA
Sbjct: 5   LLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAA 62

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 41.5 bits (98), Expect = 2e-05
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLRE 125
           ++TG+++GIG  +A +  KAG  V I  R  + +    Q  + 
Sbjct: 9   VVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQS 51

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 12/63 (19%), Positives = 19/63 (30%), Gaps = 17/63 (26%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-----------------SRSERVDSAVQSLRE 125
            L+TG+  GIG A+      AG  V +                    +   D    ++  
Sbjct: 31  ALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAA 90

Query: 126 EFG 128
             G
Sbjct: 91  GLG 93

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREE 126
           VLITG+T G+G A A+     G ++++  R    +    + +   
Sbjct: 3   VLITGATGGLGGAFARAL--KGHDLLLSGRRAGALAELAREVGAR 45

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 41.8 bits (98), Expect = 3e-05
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 5/51 (9%)

Query: 82  NVLITGSTKG-IGYALAKEFLKAGDNVII-CSR--SERVDSAVQSLREEFG 128
            VLITG+ KG IG  + +  L+ G  V++  SR   +  D   QS+  ++G
Sbjct: 478 YVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYY-QSIYAKYG 527

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 3/52 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
            +ITG+  GIG   ++   +AG  V++    E   + +       G   V  
Sbjct: 14  AIITGACGGIGLETSRVLARAGARVVLADLPE---TDLAGAAASVGRGAVHH 62

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 41.0 bits (96), Expect = 4e-05
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 6/58 (10%)

Query: 63  SSSSSSSSSVKREPMLPPYN------VLITGSTKGIGYALAKEFLKAGDNVIICSRSE 114
           +S +      +   MLP         V ITG+++GIG A+A +  K G N++I +++ 
Sbjct: 22  ASMTGGQQMGRGSAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTA 79

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 40.8 bits (96), Expect = 4e-05
 Identities = 13/55 (23%), Positives = 19/55 (34%), Gaps = 1/55 (1%)

Query: 62  SSSSSSSSSSVKREPM-LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSER 115
            SS      S  RE +      VL+ G+   +   L  E    G   +   R+E 
Sbjct: 2   GSSHHHHHHSSGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 40.7 bits (96), Expect = 5e-05
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE 114
           + ITGS  GIG AL +   +AG  VI   R +
Sbjct: 4   IAITGSASGIGAALKELLARAGHTVIGIDRGQ 35

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 40.5 bits (95), Expect = 6e-05
 Identities = 15/63 (23%), Positives = 17/63 (26%), Gaps = 6/63 (9%)

Query: 83  VLITGSTKGIGYALAKEFLK---AGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHS 139
           VLITG + GIG  LA            V    R          L E             +
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDL---KTQGRLWEAARALACPPGSLET 61

Query: 140 AAL 142
             L
Sbjct: 62  LQL 64

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 40.4 bits (95), Expect = 6e-05
 Identities = 9/32 (28%), Positives = 15/32 (46%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE 114
           V++ G    +G A+ + F K G  V+    S 
Sbjct: 6   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSA 37

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 40.4 bits (94), Expect = 7e-05
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 7/70 (10%)

Query: 65  SSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLR 124
           + S   S K         VLI G+T  IG  +A   L A     I +R      +   + 
Sbjct: 2   TVSPVPSPKG-------RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIF 54

Query: 125 EEFGEQHVCV 134
           +   ++   +
Sbjct: 55  KALEDKGAII 64

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 40.2 bits (95), Expect = 7e-05
 Identities = 8/48 (16%), Positives = 20/48 (41%), Gaps = 3/48 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQ 130
            L++G  +G+G +  +  +  G  V+        D   +++  E  + 
Sbjct: 10  ALVSGGARGMGASHVRAMVAEGAKVVFGDIL---DEEGKAMAAELADA 54

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 40.2 bits (95), Expect = 7e-05
 Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 3/52 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
           V+ITG  +G+G   A++ + AG  V++    +       +   E G+     
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLADVLD---EEGAATARELGDAARYQ 56

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 40.2 bits (95), Expect = 7e-05
 Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 3/53 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVT 135
            ++TG+  GIG A+A+     G +V+          A  +   + G       
Sbjct: 32  AIVTGAGAGIGLAVARRLADEGCHVLCADIDG---DAADAAATKIGCGAAACR 81

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 40.0 bits (94), Expect = 8e-05
 Identities = 12/32 (37%), Positives = 20/32 (62%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE 114
           + I+G ++GIG A+AK     G NV + ++S 
Sbjct: 12  MFISGGSRGIGLAIAKRVAADGANVALVAKSA 43

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 39.9 bits (94), Expect = 9e-05
 Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 35/87 (40%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS----------------------------- 113
           + ITG+++GIG A+A    + G NV I ++S                             
Sbjct: 9   LFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALK 68

Query: 114 ------ERVDSAVQSLREEFGEQHVCV 134
                 ++V +AV +  + FG   + V
Sbjct: 69  CDIREEDQVRAAVAATVDTFGGIDILV 95

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 6/72 (8%)

Query: 63  SSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQS 122
            S+S+  SS  R   L     +ITG   GIG   AK F++ G  V+I   +   D   Q 
Sbjct: 2   GSTSTPDSSTNR---LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA---DDHGQK 55

Query: 123 LREEFGEQHVCV 134
           +    G   V  
Sbjct: 56  VCNNIGSPDVIS 67

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 7/37 (18%), Positives = 13/37 (35%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSA 119
           VL+ G    +G    + F      V      E  +++
Sbjct: 10  VLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS 46

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 62  SSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVII--CSRSERVDSA 119
           SS     + ++  + M     VL+TG ++GIG A+ +   + G  V +   +  E  D+ 
Sbjct: 8   SSGVDLGTENLYFQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAV 67

Query: 120 VQSLREEFGE 129
           V ++ E  GE
Sbjct: 68  VAAITESGGE 77

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 39.5 bits (93), Expect = 1e-04
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVT 135
            ++TG   GIG A A+ F K G  V++   +E    A   +  E G +   V 
Sbjct: 30  CIVTGGGSGIGRATAELFAKNGAYVVVADVNE---DAAVRVANEIGSKAFGVR 79

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 7/50 (14%), Positives = 23/50 (46%), Gaps = 3/50 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC---SRSERVDSAVQSLREEFGE 129
            ++TG  +GIG  ++++    G ++ +     + E+    ++ +     +
Sbjct: 5   AMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQK 54

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 25/77 (32%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-------------------------SRSERVD 117
            +ITG   G+G A A+  +  G + ++                          +  + V 
Sbjct: 15  AVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQ 74

Query: 118 SAVQSLREEFGEQHVCV 134
           +A+   + +FG   V V
Sbjct: 75  TALALAKGKFGRVDVAV 91

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 39.1 bits (91), Expect = 2e-04
 Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 1/57 (1%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSLREEFGEQHV 132
           M     VLI G T  IG  +    +  G    +  R E   +     +   F +   
Sbjct: 1   MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGA 57

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 7/42 (16%), Positives = 18/42 (42%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLR 124
            ++TG+T G+G  + K+  +      +    E + +  +   
Sbjct: 8   AVVTGATGGMGIEIVKDLSRDHIVYALGRNPEHLAALAEIEG 49

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQ 130
            L+TG   G+G  + K  L  G  V     +E   +A Q L  E GE+
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINE---AAGQQLAAELGER 53

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 13/77 (16%), Positives = 27/77 (35%), Gaps = 25/77 (32%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-------------------------SRSERVD 117
            ++TG++ G+G A+ +   + G  V+                           +      
Sbjct: 10  FIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADAT 69

Query: 118 SAVQSLREEFGEQHVCV 134
           +A+   ++EFG  H  V
Sbjct: 70  AALAFAKQEFGHVHGLV 86

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII--CSRSERVDSAVQSLREEFGE 129
           +++ G+ + IG A A  F + G NV++     +E   +AV  + +    
Sbjct: 11  IVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRS 59

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 10/77 (12%), Positives = 25/77 (32%), Gaps = 25/77 (32%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-------------------------SRSERVD 117
            +++G   G+G A  +     G  V+I                          +  + V 
Sbjct: 33  AIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVL 92

Query: 118 SAVQSLREEFGEQHVCV 134
           +A+++  +    ++  V
Sbjct: 93  AAIEAANQLGRLRYAVV 109

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 38.0 bits (88), Expect = 5e-04
 Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR--SERVDSAVQSLREEFGEQHV 132
           M     +L+ G+T  IG  +AK  L  G    +  R  +   +S    L E F     
Sbjct: 1   MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA 58

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 37.5 bits (88), Expect = 7e-04
 Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII----CSRSERVDSAVQSLREEFGE 129
           ++I G  K +G   AK F     N+++       S+  +     L ++  +
Sbjct: 14  IVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAK 64

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 37.2 bits (87), Expect = 7e-04
 Identities = 16/68 (23%), Positives = 22/68 (32%), Gaps = 17/68 (25%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC----------------SRSERVDSAVQSLREE 126
            L+TG   G+G A A      G  V++                 +R E V  AV   + E
Sbjct: 5   ALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQ-E 63

Query: 127 FGEQHVCV 134
                  V
Sbjct: 64  EAPLFAVV 71

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	147
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.54
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.51
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.47
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.46
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.42
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.4
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.39
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.38
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.37
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.37
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.35
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.35
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.35
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.34
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.34
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.34
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.33
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.33
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.33
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.33
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.32
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.32
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.32
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.32
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.31
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.31
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.31
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.3
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.3
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.3
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.3
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.3
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.29
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.29
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.29
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.29
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.29
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.29
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.28
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.28
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.28
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.28
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.28
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.28
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.27
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.27
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.27
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.27
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.27
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.27
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.27
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.27
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.27
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.27
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.27
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.26
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.26
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.26
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.25
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.25
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.25
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.25
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.25
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.25
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.25
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.25
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.25
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.25
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.24
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.24
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.24
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.24
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.24
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.24
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.24
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.24
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.24
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.24
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.23
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.23
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.23
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.23
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.23
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.23
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.23
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.23
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.23
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.23
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.23
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.23
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.22
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.22
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.22
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.22
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.22
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.22
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.22
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.22
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.22
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.21
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.21
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.21
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.21
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.21
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.21
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.2
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.2
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.2
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.2
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.19
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.19
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.19
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.19
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.19
1spx_A	278	Short-chain reductase family member (5L265); paral	99.19
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.19
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.19
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.19
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.19
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.19
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.19
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.19
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.18
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.18
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.17
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.17
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.17
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.17
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.17
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.16
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.16
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.16
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.16
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.16
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.15
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.15
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.15
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.14
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.14
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.14
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.13
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.13
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.13
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.13
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.13
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.12
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.12
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.12
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.11
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.11
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.11
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.11
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.11
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.11
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.11
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.1
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.1
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.1
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.09
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.09
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.07
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.07
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.07
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.06
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.05
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.04
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.04
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.04
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.02
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.02
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.01
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	98.98
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	98.98
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	98.98
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	98.98
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	98.98
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	98.97
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	98.94
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	98.93
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	98.93
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	98.93
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	98.9
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.88
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	98.87
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.86
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	98.85
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	98.85
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	98.85
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	98.84
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	98.83
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	98.83
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	98.83
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	98.83
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	98.81
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	98.81
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	98.81
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.8
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	98.78
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	98.78
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	98.78
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.77
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	98.77
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	98.77
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.77
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	98.76
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	98.75
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.73
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	98.69
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.68
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	98.68
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	98.64
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	98.64
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	98.64
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	98.62
4e4y_A	244	Short chain dehydrogenase family protein; structur	98.62
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	98.62
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	98.62
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	98.62
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	98.61
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	98.6
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	98.6
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	98.6
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	98.55
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	98.55
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	98.54
1xq6_A	253	Unknown protein; structural genomics, protein stru	98.51
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	98.49
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.49
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	98.48
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	98.48
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	98.44
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	98.43
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	98.43
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	98.43
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	98.42
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	98.42
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	98.42
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	98.42
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	98.4
4f6c_A	427	AUSA reductase domain protein; thioester reductase	98.4
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	98.39
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	98.39
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.38
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	98.38
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	98.35
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	98.34
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	98.34
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.34
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	98.33
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	98.33
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	98.32
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	98.31
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	98.3
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	98.29
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	98.28
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	98.28
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	98.25
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	98.25
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	98.24
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	98.22
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	98.2
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	98.2
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	98.19
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	98.17
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	98.16
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	98.15
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	98.15
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	98.15
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	98.15
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.15
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	98.14
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	98.13
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	98.12
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	98.12
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	98.12
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	98.08
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	98.07
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	98.07
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	98.06
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	98.05
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	98.05
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.01
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	97.99
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	97.97
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.97
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	97.94
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	97.91
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.9
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	97.88
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	97.87
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	97.87
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.86
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	97.86
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.85
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	97.84
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	97.83
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.83
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	97.83
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	97.81
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	97.8
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.8
4f6l_B	508	AUSA reductase domain protein; thioester reductase	97.8
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.77
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	97.77
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	97.77
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	97.76
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	97.74
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	97.74
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.73
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.68
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	97.68
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	97.68
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.65
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.62
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	97.56
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	97.54
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	97.52
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.51
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.51
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.49
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.46
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.45
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	97.44
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.42
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.4
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	97.4
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	97.38
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.38
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.38
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	97.37
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.36
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.34
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.33
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.33
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.27
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	97.25
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.23
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	97.23
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.2
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	97.19
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	97.17
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.13
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.1
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.1
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.09
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.03
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.02
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	96.94
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.91
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	96.85
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	96.84
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	96.81
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	96.8
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.8
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.79
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.77
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.69
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.68
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.63
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.62
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	96.61
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.59
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	96.47
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.45
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.42
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	96.38
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.37
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	96.36
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.3
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	96.3
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.28
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	96.25
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.25
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.12
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.09
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.09
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	96.07
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.04
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.96
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	95.94
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	95.93
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.89
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	95.87
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	95.81
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	95.77
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	95.75
3c85_A	183	Putative glutathione-regulated potassium-efflux S	95.75
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.7
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.65
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	95.62
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	95.62
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	95.57
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	95.56
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.54
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.54
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.54
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.52
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	95.45
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.43
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.39
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.36
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	95.33
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.32
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	95.31
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	95.28
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	95.19
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	95.18
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	95.17
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.17
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	95.15
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	95.08
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	95.04
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	95.03
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	94.99
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	94.98
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	94.94
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	94.93
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	94.85
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	94.83
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	94.81
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	94.79
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	94.77
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	94.74
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	94.73
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	94.72
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	94.65
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	94.64
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	94.62
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	94.6
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	94.59
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	94.53
3ado_A	319	Lambda-crystallin; L-gulonate 3-dehydrogenase, str	94.53
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	94.52
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	94.48
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	94.43
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	94.31
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	94.29
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	94.27
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	94.21
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	94.2
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	94.19
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	94.17
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	94.17
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	94.07
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	94.05
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	94.04
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	93.99
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	93.99
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	93.99
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	93.97
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	93.9
4b4u_A	303	Bifunctional protein fold; oxidoreductase; HET: NA	93.88
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	93.81
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	93.81
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	93.81
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	93.71
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	93.68
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	93.57
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	93.51
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	93.47
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	93.44
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	93.43
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	93.36
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	93.29
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	93.28
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	93.18
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	93.07
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	92.98
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	92.93
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	92.88
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	92.84
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	92.78
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	92.61
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	92.52
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	92.5
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	92.49
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	92.49
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	92.46
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	92.4
3tl2_A	315	Malate dehydrogenase; center for structural genomi	92.33
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	92.3
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	92.26
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	92.2
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	92.17
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	92.16
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	92.13
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	92.13
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	92.11
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	92.11
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	92.08
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	91.96
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	91.96
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	91.88
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	91.87
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	91.86
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	91.84

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.54  E-value=1.4e-14  Score=113.39  Aligned_cols=70  Identities=21%  Similarity=0.197  Sum_probs=62.2

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+||+++||||++|||+++|+.|+++|++|+++||+ +.++++.+++.+..  ..+.+..+|++|.++.
T Consensus         3 ~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v   73 (255)
T 4g81_D            3 ALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAI   73 (255)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHH
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHH
Confidence            3678999999999999999999999999999999999999 88899999987653  3577889999998764

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.51  E-value=4e-14  Score=110.74  Aligned_cols=68  Identities=28%  Similarity=0.332  Sum_probs=60.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++|+||+++||||++|||+++|+.|+++|++|++++|+ +.++++.+++.+. + ..+.+..+|++|.++.
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~-g-~~~~~~~~Dvt~~~~v   71 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM-G-KEVLGVKADVSKKKDV   71 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-T-CCEEEEECCTTSHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-C-CcEEEEEccCCCHHHH
Confidence            46999999999999999999999999999999999999 8899999998665 3 3578889999998764

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.47  E-value=1.7e-13  Score=106.34  Aligned_cols=70  Identities=13%  Similarity=0.118  Sum_probs=58.5

Q ss_pred             CCCCCCCeEEEeCCCC--hHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~--GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |++|+||+++|||+++  |||+++|+.|+++|++|++++|+ +.++++.+++.+. +...+.+..+|+++.+++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v   73 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQL-NQPEAHLYQIDVQSDEEV   73 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGG-TCSSCEEEECCTTCHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCCcEEEEEccCCCHHHH
Confidence            4679999999999764  99999999999999999999999 6777777666544 444577889999998764

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.46  E-value=2.5e-13  Score=105.96  Aligned_cols=69  Identities=22%  Similarity=0.307  Sum_probs=57.0

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..++|+||+++||||++|||+++|+.|+++|++|++++|++. +++.+++.+. +. .+.+..+|++|.++.
T Consensus         3 n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~-~~~~~~~~~~-g~-~~~~~~~Dv~d~~~v   71 (247)
T 4hp8_A            3 NPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP-DETLDIIAKD-GG-NASALLIDFADPLAA   71 (247)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC-HHHHHHHHHT-TC-CEEEEECCTTSTTTT
T ss_pred             CCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH-HHHHHHHHHh-CC-cEEEEEccCCCHHHH
Confidence            357899999999999999999999999999999999999832 4556666554 33 467888999988764

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.42  E-value=4.9e-13  Score=105.57  Aligned_cols=64  Identities=34%  Similarity=0.471  Sum_probs=54.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .|+||+++||||++|||+++|+.|+++|++|++++|+ +.++++.+++    +. ......+|++|.++.
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~----g~-~~~~~~~Dv~~~~~v   90 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI----GG-GAVGIQADSANLAEL   90 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CT-TCEEEECCTTCHHHH
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CC-CeEEEEecCCCHHHH
Confidence            4899999999999999999999999999999999999 7777776665    33 356678999988764

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.40  E-value=1.5e-12  Score=100.95  Aligned_cols=71  Identities=27%  Similarity=0.391  Sum_probs=62.3

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++....+...+.+..+|++|.++.
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v   74 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQV   74 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHH
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHH
Confidence            356899999999999999999999999999999999999 78888888887755555588889999998764

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.39  E-value=9.6e-13  Score=102.98  Aligned_cols=67  Identities=15%  Similarity=0.160  Sum_probs=55.3

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++|+||+++||||++|||+++|+.|+++|++|++++|+ +. .+..+++.+. +. .+.+..+|+++.++.
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~-~~~~~~~~~~-~~-~~~~~~~Dv~~~~~v   70 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPD-GAFLDALAQR-QP-RATYLPVELQDDAQC   70 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCC-HHHHHHHHHH-CT-TCEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCccc-HHHHHHHHhc-CC-CEEEEEeecCCHHHH
Confidence            57999999999999999999999999999999999999 44 3455666555 33 456788999998764

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.38  E-value=4.8e-12  Score=98.74  Aligned_cols=71  Identities=28%  Similarity=0.356  Sum_probs=61.1

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.+++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++....+. .+.+..+|++|.++.
T Consensus        21 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v   92 (277)
T 4fc7_A           21 CPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGR-RCLPLSMDVRAPPAV   92 (277)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECCTTCHHHH
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHH
Confidence            3456899999999999999999999999999999999999 7788888888665443 578889999998764

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.37  E-value=2.5e-12  Score=99.79  Aligned_cols=71  Identities=32%  Similarity=0.445  Sum_probs=61.3

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++.++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++.+..+. .+.+..+|++|.++.
T Consensus        14 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~v   85 (266)
T 4egf_A           14 GVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGT-DVHTVAIDLAEPDAP   85 (266)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSTTHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHH
Confidence            3557899999999999999999999999999999999999 7888888888764443 578889999998764

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.37  E-value=2.3e-12  Score=99.80  Aligned_cols=70  Identities=31%  Similarity=0.416  Sum_probs=60.8

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++.+. +...+.+..+|++|.++.
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~~~~~v   75 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL-GSGKVIGVQTDVSDRAQC   75 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-SSSCEEEEECCTTSHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh-CCCcEEEEEcCCCCHHHH
Confidence            567899999999999999999999999999999999999 7888888888654 334678889999998764

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.35  E-value=2e-12  Score=101.21  Aligned_cols=70  Identities=20%  Similarity=0.262  Sum_probs=60.0

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.++++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++... + ..+.+..+|++|.+++
T Consensus        26 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~d~~~v   96 (276)
T 3r1i_A           26 DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV-G-GKALPIRCDVTQPDQV   96 (276)
T ss_dssp             GGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-T-CCCEEEECCTTCHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEEEcCCCCHHHH
Confidence            4567899999999999999999999999999999999999 7788888888654 3 3467788999998764

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.35  E-value=4.1e-12  Score=98.54  Aligned_cols=70  Identities=27%  Similarity=0.404  Sum_probs=61.8

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++....+...+....+|+++.++.
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~   76 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGC   76 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHH
Confidence            46899999999999999999999999999999999999 78888888888776556678889999987653

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.35  E-value=3.5e-12  Score=98.51  Aligned_cols=71  Identities=20%  Similarity=0.299  Sum_probs=59.3

Q ss_pred             CCCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        73 ~~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++..+++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++... + ..+.+..+|+++.+++
T Consensus        22 ~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~v   93 (262)
T 3rkr_A           22 KHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA-G-GEAESHACDLSHSDAI   93 (262)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-T-CEEEEEECCTTCHHHH
T ss_pred             chhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-C-CceeEEEecCCCHHHH
Confidence            34567899999999999999999999999999999999999 7788888887654 3 3578889999988764

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.34  E-value=1.6e-11  Score=96.63  Aligned_cols=71  Identities=27%  Similarity=0.281  Sum_probs=55.8

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ...+++||+++||||++|||++++++|+++|++|++++|+ +...+...++.+..+ ..+.+..+|++|.+++
T Consensus        41 ~~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v  112 (291)
T 3ijr_A           41 GSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG-VKCVLLPGDLSDEQHC  112 (291)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT-CCEEEEESCTTSHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC-CcEEEEECCCCCHHHH
Confidence            3457899999999999999999999999999999999999 444333333333333 3578889999998764

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.34  E-value=4.4e-12  Score=97.79  Aligned_cols=68  Identities=19%  Similarity=0.231  Sum_probs=58.8

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++|+++||||++|||++++++|+++|++|++++|+ +.++++.+++.+. + ..+.+..+|++|.+++
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~~~~v   71 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA-G-GRIVARSLDARNEDEV   71 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-T-CEEEEEECCTTCHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEEECcCCCHHHH
Confidence            35789999999999999999999999999999999999 8888888888665 3 3678889999998764

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.34  E-value=2.9e-12  Score=101.26  Aligned_cols=71  Identities=32%  Similarity=0.385  Sum_probs=60.9

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++++||+++||||++|||+++++.|+++|++|++++|+ +.+++..+++.+. +...+.+..+|++|.+++
T Consensus        35 ~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~d~~~v  106 (293)
T 3rih_A           35 VMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL-GAGNVIGVRLDVSDPGSC  106 (293)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS-SSSCEEEEECCTTCHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh-CCCcEEEEEEeCCCHHHH
Confidence            3567899999999999999999999999999999999999 7788888887554 334678889999998764

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.33  E-value=6.5e-12  Score=97.17  Aligned_cols=71  Identities=21%  Similarity=0.251  Sum_probs=58.7

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++.+......+.+..+|++|.++.
T Consensus         8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   79 (267)
T 1iy8_A            8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQV   79 (267)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHH
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHH
Confidence            345789999999999999999999999999999999999 77777777776553234577888999988754

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.33  E-value=4.9e-12  Score=97.61  Aligned_cols=69  Identities=23%  Similarity=0.323  Sum_probs=59.5

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++... + ..+.+..+|++|.++.
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~d~~~v   76 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA-G-GKAIGLECNVTDEQHR   76 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT-T-CCEEEEECCTTCHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEECCCCCHHHH
Confidence            457899999999999999999999999999999999999 7788888887654 3 3577888999998764

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.33  E-value=5.8e-12  Score=98.18  Aligned_cols=67  Identities=24%  Similarity=0.403  Sum_probs=58.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |+.+|+++||||++|||++++++|+++|++|++++|+ +.+++..+++... + ..+.+..+|++|.+++
T Consensus         1 Ml~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~Dv~d~~~v   68 (264)
T 3tfo_A            1 MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA-G-GTALAQVLDVTDRHSV   68 (264)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-T-CEEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-C-CcEEEEEcCCCCHHHH
Confidence            4679999999999999999999999999999999999 7888888888654 3 3577888999998764

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.33  E-value=3e-12  Score=99.90  Aligned_cols=69  Identities=28%  Similarity=0.342  Sum_probs=60.0

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++.+. + ..+.+..+|++|.++.
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~Dv~d~~~v   90 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV-G-HDAEAVAFDVTSESEI   90 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT-T-CCEEECCCCTTCHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CceEEEEcCCCCHHHH
Confidence            457899999999999999999999999999999999999 7888888888654 2 3577888999998764

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.32  E-value=5e-12  Score=97.34  Aligned_cols=69  Identities=19%  Similarity=0.236  Sum_probs=59.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCC-ceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE-QHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~-~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++.+..+. ..+.+..+|++|.++.
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   74 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKA   74 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHH
Confidence            5789999999999999999999999999999999999 7888888888765433 4677888999998754

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.32  E-value=8.1e-12  Score=99.63  Aligned_cols=71  Identities=21%  Similarity=0.296  Sum_probs=61.7

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+++||+++||||++|||+++++.|+++|++|++++|+ +.+++..+++........+.+..+|+++.+++
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v   74 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGF   74 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHH
Confidence            446889999999999999999999999999999999999 88888888887664444688899999998754

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.32  E-value=5.3e-12  Score=98.67  Aligned_cols=69  Identities=28%  Similarity=0.392  Sum_probs=55.3

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++...  ...+.+..+|++|.+++
T Consensus        19 ~~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v   88 (279)
T 3sju_A           19 SHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSCDVTSTDEV   88 (279)
T ss_dssp             ------CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHH
Confidence            446889999999999999999999999999999999999 7788888888654  23578889999998764

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.32  E-value=4.4e-12  Score=98.67  Aligned_cols=67  Identities=15%  Similarity=0.232  Sum_probs=56.8

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++++||+++||||++|||+++++.|+++|++|++++|+ +.+++..+++    + ..+.+..+|+++.++.
T Consensus        24 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~-~~~~~~~~Dl~~~~~v   91 (281)
T 3ppi_A           24 TIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL----G-NRAEFVSTNVTSEDSV   91 (281)
T ss_dssp             CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----C-TTEEEEECCTTCHHHH
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----C-CceEEEEcCCCCHHHH
Confidence            3557899999999999999999999999999999999999 6666666655    2 3578889999998764

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.31  E-value=5e-12  Score=99.20  Aligned_cols=71  Identities=20%  Similarity=0.159  Sum_probs=56.6

Q ss_pred             CCCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        73 ~~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..++.+++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++...  ...+.+..+|++|.+++
T Consensus        21 ~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v   92 (283)
T 3v8b_A           21 QSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSDELQM   92 (283)
T ss_dssp             ------CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT--TCCEEEEECCTTCHHHH
T ss_pred             hhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHH
Confidence            34567899999999999999999999999999999999999 7788888777543  23577889999998754

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.31  E-value=1.1e-11  Score=96.23  Aligned_cols=73  Identities=26%  Similarity=0.411  Sum_probs=58.1

Q ss_pred             CCCCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           72 VKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        72 ~~~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+...+++|+++||||++|||+++++.|+++|++|++++|+ +.+++..+++....+. .+.+..+|+++.++.
T Consensus        13 ~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v   86 (267)
T 1vl8_A           13 MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSNYEEV   86 (267)
T ss_dssp             ----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHH
T ss_pred             CCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHH
Confidence            344567899999999999999999999999999999999999 7777777777444343 467788999987654

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.31  E-value=5.7e-12  Score=98.27  Aligned_cols=69  Identities=20%  Similarity=0.349  Sum_probs=56.5

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccch-hh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAAL-SR  144 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~-~~  144 (147)
                      +.++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++.+.. ...+.+..+|+++. ++
T Consensus         7 ~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~   77 (311)
T 3o26_A            7 NTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIAT   77 (311)
T ss_dssp             -----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHH
T ss_pred             CccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHH
Confidence            346789999999999999999999999999999999999 77888888886653 34688889999997 43

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.30  E-value=1e-11  Score=96.90  Aligned_cols=69  Identities=22%  Similarity=0.323  Sum_probs=58.8

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++++||+++||||++|||++++++|+++|++|++++|++.+++..+++...  ...+.+..+|++|.++.
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v   94 (273)
T 3uf0_A           26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADG--GGSAEAVVADLADLEGA   94 (273)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTT--TCEEEEEECCTTCHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHH
Confidence            4578999999999999999999999999999999999777777777777543  34578889999998764

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.30  E-value=1.1e-11  Score=94.70  Aligned_cols=69  Identities=16%  Similarity=0.216  Sum_probs=59.0

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.+++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++.+.  ...+.+..+|++|.+++
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~   73 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAVDVSDPESA   73 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHH
Confidence            346899999999999999999999999999999999999 7788888887654  23577888999998764

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.30  E-value=1.1e-11  Score=96.01  Aligned_cols=68  Identities=18%  Similarity=0.360  Sum_probs=59.1

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++.+. + ..+.+..+|++|.+++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~~~~v   75 (264)
T 3ucx_A            7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT-G-RRALSVGTDITDDAQV   75 (264)
T ss_dssp             CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-T-CCEEEEECCTTCHHHH
T ss_pred             CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEEcCCCCHHHH
Confidence            35899999999999999999999999999999999999 7888888888654 2 3578889999998764

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.30  E-value=1.4e-11  Score=94.93  Aligned_cols=69  Identities=26%  Similarity=0.458  Sum_probs=58.1

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++... + ..+.+..+|++|.++.
T Consensus         4 ~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   73 (260)
T 2ae2_A            4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-G-FKVEASVCDLSSRSER   73 (260)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-T-CEEEEEECCTTCHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEEcCCCCHHHH
Confidence            345889999999999999999999999999999999999 7777777777543 3 3577888999987653

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.30  E-value=1.1e-11  Score=95.26  Aligned_cols=66  Identities=21%  Similarity=0.164  Sum_probs=55.3

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++..     ...+..+|++|.+++
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v   70 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-----NGKGMALNVTNPESI   70 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG-----GEEEEECCTTCHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-----cceEEEEeCCCHHHH
Confidence            567899999999999999999999999999999999999 666666655532     356778899988764

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.29  E-value=9.6e-12  Score=97.49  Aligned_cols=69  Identities=20%  Similarity=0.245  Sum_probs=56.1

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++.+..+ ..+.+..+|++|.++.
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v   98 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG-NIVRAVVCDVGDPDQV   98 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CeEEEEEcCCCCHHHH
Confidence            46899999999999999999999999999999999999 778888888876543 3567889999998764

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.29  E-value=4.2e-12  Score=99.28  Aligned_cols=68  Identities=22%  Similarity=0.205  Sum_probs=58.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++...  ...+.+..+|+++.++.
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~   97 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS--GGTAQELAGDLSEAGAG   97 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT--TCCEEEEECCTTSTTHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEecCCCHHHH
Confidence            46899999999999999999999999999999999999 7778888887654  23577889999987654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.29  E-value=1.1e-11  Score=96.38  Aligned_cols=69  Identities=26%  Similarity=0.309  Sum_probs=57.0

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.+++|+++||||++|||++++++|+++|++|++++++  +.+++..+++... + ..+.+..+|++|.+++
T Consensus        23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~d~~~v   93 (269)
T 4dmm_A           23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA-G-GEAFAVKADVSQESEV   93 (269)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-T-CCEEEEECCTTSHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-C-CcEEEEECCCCCHHHH
Confidence            356899999999999999999999999999999999995  5666777777554 3 3577888999998764

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.29  E-value=1.2e-11  Score=96.44  Aligned_cols=70  Identities=23%  Similarity=0.294  Sum_probs=59.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCC-ceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE-QHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~-~~v~~~~~Dvs~~~~~  145 (147)
                      +++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++.+.... ..+.+..+|++|.++.
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v   78 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDET   78 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHH
Confidence            46889999999999999999999999999999999999 7788888888654321 2678889999998764

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.29  E-value=2.1e-11  Score=94.00  Aligned_cols=73  Identities=22%  Similarity=0.279  Sum_probs=61.5

Q ss_pred             CCCCCCCCCCeEEEeCCC-ChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           72 VKREPMLPPYNVLITGST-KGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        72 ~~~~~~l~gkv~vVTG~s-~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +..++++++|+++||||+ +|||++++++|+++|++|++++|+ +.+++..+++.+. +...+.+..+|++|.+++
T Consensus        14 ~~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dl~~~~~v   88 (266)
T 3o38_A           14 IDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL-GLGRVEAVVCDVTSTEAV   88 (266)
T ss_dssp             CCCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-CSSCEEEEECCTTCHHHH
T ss_pred             cccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc-CCCceEEEEeCCCCHHHH
Confidence            334567899999999997 699999999999999999999999 7788888888554 344688899999998764

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.29  E-value=1.1e-11  Score=95.40  Aligned_cols=70  Identities=19%  Similarity=0.261  Sum_probs=59.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHH---CCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLK---AGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~---~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+++|+++||||++|||++++++|++   +|++|++++|+ +.+++..+++....+...+.+..+|+++.+++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v   75 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGV   75 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHH
Confidence            357899999999999999999999999   89999999999 77888888886654344678889999988754

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.28  E-value=1.2e-11  Score=95.86  Aligned_cols=70  Identities=16%  Similarity=0.201  Sum_probs=57.7

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC----hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS----ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~----~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++++||+++||||++|||+++|++|+++|++|++++|.    +.++++.+++...  +..+.+..+|++|.+++
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v   78 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEV   78 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHH
Confidence            3567899999999999999999999999999999998775    4566666666543  34678889999998764

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.28  E-value=1.7e-11  Score=95.20  Aligned_cols=69  Identities=20%  Similarity=0.277  Sum_probs=57.6

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+++||+++||||++|||++++++|+++|++|++++++  +.+++..+++... + ..+.+..+|++|.++.
T Consensus        13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~~~~v   83 (270)
T 3is3_A           13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL-G-SDAIAIKADIRQVPEI   83 (270)
T ss_dssp             TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-T-CCEEEEECCTTSHHHH
T ss_pred             CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-C-CcEEEEEcCCCCHHHH
Confidence            456899999999999999999999999999999998876  5667777777554 3 3577889999998764

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.28  E-value=7.8e-12  Score=96.44  Aligned_cols=67  Identities=22%  Similarity=0.365  Sum_probs=57.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++... + ..+.+..+|++|.+++
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~~~~v   70 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF-P-GQILTVQMDVRNTDDI   70 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS-T-TCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEEccCCCHHHH
Confidence            5789999999999999999999999999999999999 7777777777543 2 3578889999998764

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.28  E-value=1.5e-11  Score=95.67  Aligned_cols=67  Identities=25%  Similarity=0.294  Sum_probs=55.7

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++.++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++    + ..+.+..+|++|.+++
T Consensus        21 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dv~d~~~v   88 (266)
T 3grp_A           21 SMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL----G-KDVFVFSANLSDRKSI   88 (266)
T ss_dssp             CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----C-SSEEEEECCTTSHHHH
T ss_pred             chhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----C-CceEEEEeecCCHHHH
Confidence            3567899999999999999999999999999999999999 6666554433    3 3577888999988764

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.28  E-value=1.8e-11  Score=96.71  Aligned_cols=69  Identities=22%  Similarity=0.300  Sum_probs=59.6

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++...  ...+.+..+|++|.++.
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v   95 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCDVRHLDEM   95 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHH
Confidence            345899999999999999999999999999999999999 7888888888654  23578889999998764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.28  E-value=9.7e-12  Score=97.39  Aligned_cols=68  Identities=26%  Similarity=0.397  Sum_probs=56.9

Q ss_pred             CCCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        73 ~~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++++++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++     ...+.+..+|++|.+++
T Consensus         9 ~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v   77 (291)
T 3rd5_A            9 ADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSV   77 (291)
T ss_dssp             GGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHH
T ss_pred             hhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHH
Confidence            44667999999999999999999999999999999999999 6665554443     23678889999998764

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.27  E-value=2.3e-11  Score=93.53  Aligned_cols=68  Identities=24%  Similarity=0.360  Sum_probs=57.5

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccc--cchhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHS--AALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dv--s~~~~  144 (147)
                      ..++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++.+..+. .+.+..+|+  ++.++
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~   78 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGR-QPQWFILDLLTCTSEN   78 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSC-CCEEEECCTTTCCHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC-CceEEEEecccCCHHH
Confidence            46899999999999999999999999999999999999 7888888888766542 456777888  66654

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.27  E-value=1.9e-11  Score=93.19  Aligned_cols=67  Identities=21%  Similarity=0.318  Sum_probs=57.6

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++.+. + ..+.+..+|++|.++.
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   69 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK-G-FKARGLVLNISDIESI   69 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-T-CCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CceEEEEecCCCHHHH
Confidence            5789999999999999999999999999999999999 7777777777554 3 3578888999988764

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.27  E-value=7.7e-12  Score=98.07  Aligned_cols=69  Identities=19%  Similarity=0.265  Sum_probs=58.3

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++...  ...+.+..+|+++.+++
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v   72 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVGDEALH   72 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT--TCCEEECCCCTTCHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHH
Confidence            346899999999999999999999999999999999999 7778877777543  33578889999998764

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.27  E-value=1.6e-11  Score=95.69  Aligned_cols=68  Identities=19%  Similarity=0.241  Sum_probs=57.8

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+++|+++||||++|||+++|++|+++|++|++++|+ +.+++..+++... +. .+.+..+|++|.++.
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~d~~~v   92 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA-GL-EGRGAVLNVNDATAV   92 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-TC-CCEEEECCTTCHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEEeCCCHHHH
Confidence            35899999999999999999999999999999999999 7778887777655 32 456778899988754

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.27  E-value=2.9e-11  Score=94.26  Aligned_cols=69  Identities=26%  Similarity=0.391  Sum_probs=57.8

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.++++|+++||||++|||+++++.|+++|++|++++|+ +.+++..+++.+. + ..+.+..+|++|.++.
T Consensus        17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~Dv~~~~~v   86 (277)
T 2rhc_B           17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-G-VEADGRTCDVRSVPEI   86 (277)
T ss_dssp             TCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-T-CCEEEEECCTTCHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CceEEEECCCCCHHHH
Confidence            335899999999999999999999999999999999999 7777777777544 3 3467788999987653

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.27  E-value=2e-11  Score=96.22  Aligned_cols=73  Identities=18%  Similarity=0.219  Sum_probs=58.3

Q ss_pred             CCCCCCCCCCCeEEEeCCCC--hHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           71 SVKREPMLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        71 ~~~~~~~l~gkv~vVTG~s~--GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+..+++++||+++||||++  |||++++++|+++|++|++++|++...+..+++.+..+.  +.+..+|++|.+++
T Consensus        21 sm~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~Dv~d~~~v   95 (296)
T 3k31_A           21 SMRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGV--KLTVPCDVSDAESV   95 (296)
T ss_dssp             CCCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTC--CEEEECCTTCHHHH
T ss_pred             cccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCC--eEEEEcCCCCHHHH
Confidence            44556789999999999986  999999999999999999999994444445555555443  46788999998764

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.27  E-value=1.8e-11  Score=95.39  Aligned_cols=69  Identities=20%  Similarity=0.312  Sum_probs=57.0

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeec-------------C-hhHHHHHHHHHHHhCCceEEEEecccc
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-------------S-ERVDSAVQSLREEFGEQHVCVTWQHSA  140 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r-------------~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs  140 (147)
                      +.+++||+++||||++|||++++++|+++|++|++++|             + +.+++..+++... + ..+.+..+|++
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~   87 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ-G-RKALTRVLDVR   87 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT-T-CCEEEEECCTT
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-C-CeEEEEEcCCC
Confidence            45689999999999999999999999999999999998             5 6666666666543 3 35778889999


Q ss_pred             chhhh
Q 032098          141 ALSRH  145 (147)
Q Consensus       141 ~~~~~  145 (147)
                      |.+++
T Consensus        88 ~~~~v   92 (280)
T 3pgx_A           88 DDAAL   92 (280)
T ss_dssp             CHHHH
T ss_pred             CHHHH
Confidence            88764

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.27  E-value=2.5e-11  Score=91.85  Aligned_cols=66  Identities=24%  Similarity=0.372  Sum_probs=57.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++....+ ..+.+..+|++|.++.
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v   67 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG-VEVFYHHLDVSKAESV   67 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CeEEEEEeccCCHHHH
Confidence            47899999999999999999999999999999999 788888888875554 3578889999998764

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.27  E-value=1.8e-11  Score=94.50  Aligned_cols=66  Identities=18%  Similarity=0.346  Sum_probs=54.9

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +..++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++    + ..+.+..+|++|.++.
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dv~~~~~v   69 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF----G-PRVHALRSDIADLNEI   69 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----G-GGEEEEECCTTCHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----C-CcceEEEccCCCHHHH
Confidence            346899999999999999999999999999999999999 6666655554    2 3577888999988764

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.27  E-value=1.5e-11  Score=94.40  Aligned_cols=65  Identities=25%  Similarity=0.344  Sum_probs=55.0

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++||+++||||++|||+++++.|+++|++|++++|+ +.+++..+++    + ..+.+..+|++|.++.
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dv~~~~~v   67 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI----G-KKARAIAADISDPGSV   67 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----C-TTEEECCCCTTCHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----C-CceEEEEcCCCCHHHH
Confidence            35889999999999999999999999999999999999 6666666555    2 3477888999988764

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.27  E-value=2.7e-11  Score=93.28  Aligned_cols=69  Identities=17%  Similarity=0.286  Sum_probs=57.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++....+...+.+..+|++|.++.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   73 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDI   73 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHH
Confidence            4789999999999999999999999999999999999 77777777775432222577888999988754

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.26  E-value=3.5e-11  Score=92.73  Aligned_cols=69  Identities=32%  Similarity=0.479  Sum_probs=57.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++....+. .+.+..+|++|.++.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~   72 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVAVDVATPEGV   72 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHH
Confidence            35789999999999999999999999999999999999 7777777777654333 467788999988754

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.26  E-value=2.3e-11  Score=94.30  Aligned_cols=70  Identities=36%  Similarity=0.395  Sum_probs=55.8

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..++++||+++||||++|||++++++|+++|++|++++|+  +..++..+++... + ..+.+..+|+++.++.
T Consensus        23 ~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~v   94 (271)
T 4iin_A           23 NAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK-G-YKAAVIKFDAASESDF   94 (271)
T ss_dssp             -CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-T-CCEEEEECCTTCHHHH
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-C-CceEEEECCCCCHHHH
Confidence            3567899999999999999999999999999999999996  4445555555433 3 3577889999988754

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.26  E-value=1.6e-11  Score=95.51  Aligned_cols=70  Identities=17%  Similarity=0.251  Sum_probs=53.0

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+++++|+++||||++|||+++|++|+++|++|++++++  +.+++..+++... + ..+.+..+|++|.+++
T Consensus        21 ~~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~v   92 (267)
T 3u5t_A           21 QSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA-G-GKALTAQADVSDPAAV   92 (267)
T ss_dssp             ------CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT-T-CCEEEEECCTTCHHHH
T ss_pred             cccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-C-CeEEEEEcCCCCHHHH
Confidence            3456899999999999999999999999999999998655  5666666666544 3 3577888999998764

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.25  E-value=6.4e-11  Score=93.24  Aligned_cols=70  Identities=23%  Similarity=0.249  Sum_probs=55.5

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC---hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS---ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~---~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++++||+++||||++|||++++++|+++|++|++++|+   +.+++..+++. ..+ ..+.+..+|++|.+++
T Consensus        43 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~Dv~d~~~v  115 (294)
T 3r3s_A           43 GSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIE-ECG-RKAVLLPGDLSDESFA  115 (294)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHH-HTT-CCEEECCCCTTSHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHH-HcC-CcEEEEEecCCCHHHH
Confidence            3567899999999999999999999999999999999987   23444444443 333 3577888999998754

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.25  E-value=2.9e-11  Score=93.14  Aligned_cols=67  Identities=24%  Similarity=0.315  Sum_probs=57.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++... + ..+.+..+|++|.+++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~~~~v   69 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL-G-GQCVPVVCDSSQESEV   69 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-S-SEEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc-C-CceEEEECCCCCHHHH
Confidence            3679999999999999999999999999999999999 7777777777654 3 3577888999988754

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.25  E-value=2.6e-11  Score=93.26  Aligned_cols=69  Identities=35%  Similarity=0.469  Sum_probs=57.3

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ...+++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++... + ..+.+..+|++|.++.
T Consensus         9 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~   78 (260)
T 2zat_A            9 RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE-G-LSVTGTVCHVGKAEDR   78 (260)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-T-CCEEEEECCTTCHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CceEEEEccCCCHHHH
Confidence            445889999999999999999999999999999999999 7777777777554 2 3467788999987653

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.25  E-value=1.5e-11  Score=96.89  Aligned_cols=69  Identities=30%  Similarity=0.484  Sum_probs=61.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC---EEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD---NVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga---~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++||+++||||++|||+++|++|+++|+   +|++++|+ +.++++.+++....+...+.+..+|++|.+++
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v  102 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKI  102 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGH
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHH
Confidence            47899999999999999999999999998   99999999 88888888887765556788899999998764

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.25  E-value=2.2e-11  Score=94.01  Aligned_cols=69  Identities=26%  Similarity=0.321  Sum_probs=56.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||+++++.|+++|++|++++|+ +.+++..+++.+......+.+..+|++|.++.
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v   73 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQL   73 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHH
Confidence            5789999999999999999999999999999999999 66666666665432234577888999988654

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.25  E-value=3.1e-11  Score=92.54  Aligned_cols=67  Identities=30%  Similarity=0.340  Sum_probs=57.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||+++++.|+++|++|++++|+ +.+++..+++... + ..+.+..+|++|.++.
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~Dv~~~~~~   71 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA-G-AKVHVLELDVADRQGV   71 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-T-CCEEEEECCTTCHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-C-CcEEEEECCCCCHHHH
Confidence            4789999999999999999999999999999999999 7777777777553 3 3577888999988654

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.25  E-value=3.5e-11  Score=93.55  Aligned_cols=68  Identities=31%  Similarity=0.465  Sum_probs=57.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++... + ..+.+..+|++|.++.
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   85 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-G-LNVEGSVCDLLSRTER   85 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-T-CCEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CceEEEECCCCCHHHH
Confidence            45889999999999999999999999999999999999 7777777777554 3 3477888999987654

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.25  E-value=3.9e-11  Score=93.85  Aligned_cols=68  Identities=25%  Similarity=0.359  Sum_probs=57.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+++|+++||||++|||+++++.|+++|++|++++++  +.+++..+++... + ..+.+..+|++|.+++
T Consensus        25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~d~~~v   94 (280)
T 4da9_A           25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL-G-ARVIFLRADLADLSSH   94 (280)
T ss_dssp             SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT-T-CCEEEEECCTTSGGGH
T ss_pred             hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-C-CcEEEEEecCCCHHHH
Confidence            35789999999999999999999999999999999974  6677777777554 3 3578889999998764

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.25  E-value=3.6e-11  Score=93.57  Aligned_cols=68  Identities=25%  Similarity=0.318  Sum_probs=56.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hh-------HHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ER-------VDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~-------~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++||+++||||++|||+++++.|+++|++|++++|+ +.       +++..+++... + ..+.+..+|++|.+++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~~~~v   77 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA-G-GQGLALKCDIREEDQV   77 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH-T-SEEEEEECCTTCHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc-C-CeEEEEeCCCCCHHHH
Confidence            46899999999999999999999999999999999998 42       56666666554 3 3578889999998764

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.25  E-value=3.1e-11  Score=94.40  Aligned_cols=68  Identities=19%  Similarity=0.244  Sum_probs=55.2

Q ss_pred             CCCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        73 ~~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.+++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++    +. .+.+..+|++|.++.
T Consensus        20 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~d~~~v   88 (277)
T 4dqx_A           20 FQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI----GS-KAFGVRVDVSSAKDA   88 (277)
T ss_dssp             --CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----CT-TEEEEECCTTCHHHH
T ss_pred             cccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-ceEEEEecCCCHHHH
Confidence            34567899999999999999999999999999999999999 6666655543    32 467788999988764

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.24  E-value=3.8e-11  Score=93.60  Aligned_cols=69  Identities=22%  Similarity=0.334  Sum_probs=57.2

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+++||+++||||++|||++++++|+++|++|++++++  +.+++..+++... + ..+.+..+|++|.+++
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~Dv~d~~~v   96 (271)
T 3v2g_A           26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA-G-GRAVAIRADNRDAEAI   96 (271)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-T-CCEEEEECCTTCHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-C-CcEEEEECCCCCHHHH
Confidence            346899999999999999999999999999999999776  5667777777543 3 3577888999998764

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.24  E-value=1.8e-11  Score=95.54  Aligned_cols=68  Identities=26%  Similarity=0.368  Sum_probs=57.0

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++... +  .+.+..+|++|.++.
T Consensus        24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~--~~~~~~~Dv~d~~~v   92 (276)
T 2b4q_A           24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY-G--DCQAIPADLSSEAGA   92 (276)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS-S--CEEECCCCTTSHHHH
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C--ceEEEEeeCCCHHHH
Confidence            456899999999999999999999999999999999999 6677777666432 2  577888999987653

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.24  E-value=3.2e-11  Score=92.95  Aligned_cols=65  Identities=28%  Similarity=0.398  Sum_probs=54.8

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++    +. .+.+..+|++|.++.
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~v   69 (259)
T 4e6p_A            4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI----GP-AAYAVQMDVTRQDSI   69 (259)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CT-TEEEEECCTTCHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-CceEEEeeCCCHHHH
Confidence            46889999999999999999999999999999999999 6666666555    22 467888999988764

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.24  E-value=3.1e-11  Score=94.58  Aligned_cols=68  Identities=25%  Similarity=0.351  Sum_probs=57.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-h-------hHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-E-------RVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~-------~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++|+++||||++|||++++++|+++|++|++++|+ +       .+++..+++... + ..+.+..+|++|.+++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~~~~v   80 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA-G-GQALPIVGDIRDGDAV   80 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH-T-SEEEEEECCTTSHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc-C-CcEEEEECCCCCHHHH
Confidence            46899999999999999999999999999999999999 4       467777777655 3 3578889999998764

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.24  E-value=3.6e-11  Score=93.50  Aligned_cols=68  Identities=19%  Similarity=0.297  Sum_probs=56.5

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeec-------------C-hhHHHHHHHHHHHhCCceEEEEeccccc
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-------------S-ERVDSAVQSLREEFGEQHVCVTWQHSAA  141 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r-------------~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~  141 (147)
                      .+++||+++||||++|||++++++|+++|++|++++|             + +.+++..+++...  ...+.+..+|++|
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   84 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA--NRRIVAAVVDTRD   84 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTC
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCC
Confidence            3589999999999999999999999999999999998             5 5666666666543  3357888999999


Q ss_pred             hhhh
Q 032098          142 LSRH  145 (147)
Q Consensus       142 ~~~~  145 (147)
                      .+++
T Consensus        85 ~~~v   88 (277)
T 3tsc_A           85 FDRL   88 (277)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.24  E-value=1.3e-11  Score=95.82  Aligned_cols=69  Identities=23%  Similarity=0.329  Sum_probs=48.0

Q ss_pred             CCCCCCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           70 SSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        70 ~~~~~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+...++++++|+++||||++|||++++++|+++|++|++++|+ +.+.+   ++.+. +   +.+..+|+++.++.
T Consensus        17 ~~~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~---~~~~~-~---~~~~~~Dv~~~~~v   86 (260)
T 3gem_A           17 LYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVT---ELRQA-G---AVALYGDFSCETGI   86 (260)
T ss_dssp             ----------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHH---HHHHH-T---CEEEECCTTSHHHH
T ss_pred             cccccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH---HHHhc-C---CeEEECCCCCHHHH
Confidence            34444667999999999999999999999999999999999999 54433   33222 2   46778899987754

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.24  E-value=4e-11  Score=94.53  Aligned_cols=68  Identities=15%  Similarity=0.262  Sum_probs=55.8

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-------------hhHHHHHHHHHHHhCCceEEEEeccccch
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-------------ERVDSAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-------------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      .+++||+++||||++|||++++++|+++|++|++++|+             +.+++..+++... + ..+.+..+|++|.
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~~  101 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL-G-RRIIASQVDVRDF  101 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT-T-CCEEEEECCTTCH
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc-C-CceEEEECCCCCH
Confidence            46899999999999999999999999999999999875             3455666666543 3 3578889999998


Q ss_pred             hhh
Q 032098          143 SRH  145 (147)
Q Consensus       143 ~~~  145 (147)
                      +++
T Consensus       102 ~~v  104 (299)
T 3t7c_A          102 DAM  104 (299)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.24  E-value=2.7e-11  Score=93.37  Aligned_cols=70  Identities=17%  Similarity=0.284  Sum_probs=57.6

Q ss_pred             CCCCCCeEEEeCCC--ChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s--~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++||+++||||+  +|||+++++.|+++|++|++++|++...+..+++.++.+...+.+..+|+++.+++
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   74 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEI   74 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHH
Confidence            46889999999999  77999999999999999999999955555566666655554678889999988764

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.24  E-value=3.9e-11  Score=93.17  Aligned_cols=70  Identities=17%  Similarity=0.211  Sum_probs=58.8

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+++|+++||||++|||+++++.|+++|++|++++|+ +.+++..+++........+.+..+|+++.++.
T Consensus        28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v   98 (279)
T 1xg5_A           28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDI   98 (279)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHH
Confidence            35789999999999999999999999999999999999 77777777776543334577888999988753

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.24  E-value=7.9e-11  Score=92.07  Aligned_cols=71  Identities=15%  Similarity=0.231  Sum_probs=59.9

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +..++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++.+..+. .+.+..+|+++.++.
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~~   91 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQCDVRDPDMV   91 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECCTTCHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-ceEEEEeCCCCHHHH
Confidence            3456899999999999999999999999999999999999 7777777777665443 477888999987653

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.23  E-value=1.4e-11  Score=95.67  Aligned_cols=62  Identities=23%  Similarity=0.316  Sum_probs=50.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..++||+++||||++|||+++|+.|+++|++|+++||+ +.+++       . ....+....+|++|.+++
T Consensus         7 dlf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-------~-~~~~~~~~~~Dv~~~~~v   69 (242)
T 4b79_A            7 DIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-------P-RHPRIRREELDITDSQRL   69 (242)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-------C-CCTTEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-------h-hcCCeEEEEecCCCHHHH
Confidence            35799999999999999999999999999999999999 54332       1 123577888999988764

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.23  E-value=4.6e-11  Score=94.09  Aligned_cols=70  Identities=21%  Similarity=0.306  Sum_probs=57.2

Q ss_pred             CCCCCCCCeEEEeCCC--ChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s--~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.+++||+++||||+  +|||++++++|+++|++|++++|++...+..+++.+..+  .+.+..+|++|.+++
T Consensus        25 ~~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v   96 (293)
T 3grk_A           25 QSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG--AFVAGHCDVADAASI   96 (293)
T ss_dssp             --CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT--CEEEEECCTTCHHHH
T ss_pred             ccccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CceEEECCCCCHHHH
Confidence            3556899999999999  669999999999999999999999656666667766655  367889999998764

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.23  E-value=3.1e-11  Score=94.50  Aligned_cols=70  Identities=23%  Similarity=0.283  Sum_probs=57.3

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.++.+|+++||||++|||++++++|+++|++|++++|+  +.+++..+++... ....+.+..+|++|.++.
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v   91 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL-SSGTVLHHPADMTKPSEI   91 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTT-CSSCEEEECCCTTCHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhc-cCCcEEEEeCCCCCHHHH
Confidence            456889999999999999999999999999999999995  6667777777543 234678889999998764

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.23  E-value=3.7e-11  Score=91.97  Aligned_cols=67  Identities=22%  Similarity=0.377  Sum_probs=55.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |+.+|+++||||++|||++++++|+++|++|++++++  +.+++..+++... + ..+.+..+|++|.++.
T Consensus         1 Ml~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~d~~~v   69 (246)
T 3osu_A            1 MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK-G-VDSFAIQANVADADEV   69 (246)
T ss_dssp             CCCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-T-SCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-C-CcEEEEEccCCCHHHH
Confidence            3678999999999999999999999999999999886  6677777777554 3 3577888999988764

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.23  E-value=4e-11  Score=92.06  Aligned_cols=66  Identities=24%  Similarity=0.333  Sum_probs=55.0

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++    + ..+.+..+|+++.++.
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~~   70 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI----G-DAALAVAADISKEADV   70 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----C-TTEEEEECCTTSHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----C-CceEEEEecCCCHHHH
Confidence            356899999999999999999999999999999999999 6666665544    2 2477888999988754

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.23  E-value=3.1e-11  Score=96.04  Aligned_cols=69  Identities=22%  Similarity=0.294  Sum_probs=57.5

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-----------hhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-----------ERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-----------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      +.+++||+++||||++|||+++|+.|+++|++|++++|+           +.+++..+++... + ..+.+..+|++|.+
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~d~~   99 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA-G-GEAVADGSNVADWD   99 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT-T-CEEEEECCCTTSHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc-C-CcEEEEECCCCCHH
Confidence            556899999999999999999999999999999999875           4566667777554 3 35788899999987


Q ss_pred             hh
Q 032098          144 RH  145 (147)
Q Consensus       144 ~~  145 (147)
                      +.
T Consensus       100 ~v  101 (322)
T 3qlj_A          100 QA  101 (322)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.23  E-value=3.1e-11  Score=94.02  Aligned_cols=69  Identities=30%  Similarity=0.358  Sum_probs=57.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhC-CceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG-EQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||+++++.|+++|++|++++|+ +.+++..+++....+ ...+.+..+|++|.++.
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   73 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQ   73 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHH
Confidence            4789999999999999999999999999999999999 777777777754322 11577888999988754

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.23  E-value=3e-11  Score=93.36  Aligned_cols=69  Identities=19%  Similarity=0.290  Sum_probs=55.8

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeec-C-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-S-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r-~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++||+++||||++|||++++++|+++|++|+++++ + +.+++..+++.+. + ..+.+..+|++|.++.
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~~~~v   73 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL-G-RSALAIKADLTNAAEV   73 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT-T-SCCEEEECCTTCHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-C-CceEEEEcCCCCHHHH
Confidence            35689999999999999999999999999999999854 4 6667777777543 3 3467788999998764

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.23  E-value=3.5e-11  Score=94.94  Aligned_cols=71  Identities=25%  Similarity=0.334  Sum_probs=57.8

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhC-CceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG-EQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~~  145 (147)
                      ++.+++|+++||||++|||+++++.|+++|++|++++|+ +.+++..+++.+..+ ...+.+..+|+++.++.
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v   93 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQ   93 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHH
Confidence            445899999999999999999999999999999999999 777777777755422 11477888999988754

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.23  E-value=1.7e-11  Score=94.24  Aligned_cols=65  Identities=15%  Similarity=0.188  Sum_probs=47.6

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++.     ..+.+..+|++|.++.
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v   68 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG-----AAVRFRNADVTNEADA   68 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC-----CceEEEEccCCCHHHH
Confidence            45889999999999999999999999999999999999 66666665552     2467788999988754

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.23  E-value=4.8e-11  Score=92.68  Aligned_cols=69  Identities=14%  Similarity=0.192  Sum_probs=55.5

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-------------hhHHHHHHHHHHHhCCceEEEEeccccc
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-------------ERVDSAVQSLREEFGEQHVCVTWQHSAA  141 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-------------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~  141 (147)
                      +.+++||+++||||++|||++++++|+++|++|++++|+             +.+++..+++...  ...+.+..+|++|
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   82 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVRD   82 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT--TSCEEEEECCTTC
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc--CCceEEEEccCCC
Confidence            557899999999999999999999999999999999985             2344445555433  3457888999999


Q ss_pred             hhhh
Q 032098          142 LSRH  145 (147)
Q Consensus       142 ~~~~  145 (147)
                      .+++
T Consensus        83 ~~~v   86 (287)
T 3pxx_A           83 RAAV   86 (287)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.23  E-value=3.4e-11  Score=91.85  Aligned_cols=63  Identities=21%  Similarity=0.282  Sum_probs=52.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+|+++||||++|||++++++|+++|++|++++|+ +.+++..+++.    . .+.+..+|++|.+++
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~-~~~~~~~D~~~~~~v   64 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG----N-AVIGIVADLAHHEDV   64 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----G-GEEEEECCTTSHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----C-CceEEECCCCCHHHH
Confidence            357999999999999999999999999999999999 77776666652    2 378889999988764

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.22  E-value=5.6e-11  Score=92.24  Aligned_cols=69  Identities=20%  Similarity=0.272  Sum_probs=55.5

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-------------hhHHHHHHHHHHHhCCceEEEEeccccc
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-------------ERVDSAVQSLREEFGEQHVCVTWQHSAA  141 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-------------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~  141 (147)
                      ..+++||+++||||++|||++++++|+++|++|++++|+             +.+++..+++... + ..+.+..+|++|
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~   85 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI-G-SRIVARQADVRD   85 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH-T-CCEEEEECCTTC
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc-C-CeEEEEeCCCCC
Confidence            456899999999999999999999999999999999875             3445555555444 3 357888999999


Q ss_pred             hhhh
Q 032098          142 LSRH  145 (147)
Q Consensus       142 ~~~~  145 (147)
                      .+++
T Consensus        86 ~~~v   89 (278)
T 3sx2_A           86 RESL   89 (278)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.22  E-value=4.3e-11  Score=92.20  Aligned_cols=67  Identities=19%  Similarity=0.278  Sum_probs=56.5

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hh-HHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ER-VDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~-~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++|+++||||++|||+++++.|+++|++|++++|+ +. +++..+++....+. .+.+..+|++|.++.
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v   70 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV-KVLYDGADLSKGEAV   70 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTS-CEEEECCCTTSHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCC-cEEEEECCCCCHHHH
Confidence            679999999999999999999999999999999999 66 77777777654333 467788999988754

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.22  E-value=2.7e-11  Score=94.81  Aligned_cols=65  Identities=22%  Similarity=0.334  Sum_probs=53.6

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++    + ..+.+..+|++|.+++
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dv~d~~~v   90 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI----G-CGAAACRVDVSDEQQI   90 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----C-SSCEEEECCTTCHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C-CcceEEEecCCCHHHH
Confidence            46899999999999999999999999999999999999 6666665554    2 2467788999988764

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.22  E-value=3.8e-11  Score=94.32  Aligned_cols=68  Identities=16%  Similarity=0.178  Sum_probs=55.5

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEee-cC-hhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RS-ERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~-r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      ++++++|+++||||++|||+++++.|+++|++|++++ |+ +.+++..+++....+ ..+.+..+|+++.+
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~   73 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVA   73 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSC
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC-CeeEEEEeecCCcc
Confidence            4468899999999999999999999999999999999 88 777777777763433 35778889999876

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.22  E-value=3.1e-11  Score=93.81  Aligned_cols=65  Identities=20%  Similarity=0.261  Sum_probs=54.8

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++    +. .+.+..+|++|.++.
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~~~~~v   72 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV----GR-GAVHHVVDLTNEVSV   72 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH----CT-TCEEEECCTTCHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CC-CeEEEECCCCCHHHH
Confidence            36899999999999999999999999999999999999 7777766655    22 356778899988754

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.22  E-value=3.3e-11  Score=93.15  Aligned_cols=66  Identities=24%  Similarity=0.329  Sum_probs=55.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEe-ecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~-~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++|+++||||++|||++++++|+++|++|+++ +|+ +.+++..+++.+. + ..+.+..+|++|.+++
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~~~~v   69 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL-G-VKVLVVKANVGQPAKI   69 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-T-CCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-C-CcEEEEEcCCCCHHHH
Confidence            578999999999999999999999999999997 777 7777777777543 3 3578889999998764

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.22  E-value=4.6e-11  Score=91.33  Aligned_cols=67  Identities=25%  Similarity=0.425  Sum_probs=55.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeec-C-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-S-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r-~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||+++++.|+++|++|++++| + +.+++..+++... + ..+.+..+|++|.++.
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   69 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL-G-SDAIAVRADVANAEDV   69 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-T-CCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-C-CcEEEEEcCCCCHHHH
Confidence            367899999999999999999999999999999999 6 6677777777543 3 3467788999988754

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.22  E-value=4.7e-11  Score=92.16  Aligned_cols=67  Identities=21%  Similarity=0.231  Sum_probs=56.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||+++++.|+++|++|++++|+ +.+++..+++... + ..+.+..+|+++.++.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   71 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-G-VEARSYVCDVTSEEAV   71 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-T-SCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEEecCCCHHHH
Confidence            4789999999999999999999999999999999999 7777777777543 2 3477888999988754

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.22  E-value=4.6e-11  Score=92.96  Aligned_cols=69  Identities=20%  Similarity=0.343  Sum_probs=55.1

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-------------hhHHHHHHHHHHHhCCceEEEEeccccc
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-------------ERVDSAVQSLREEFGEQHVCVTWQHSAA  141 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-------------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~  141 (147)
                      +.+++||+++||||++|||++++++|+++|++|++++|+             +.+++..+++... + ..+.+..+|++|
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~   82 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT-G-RRCISAKVDVKD   82 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT-T-CCEEEEECCTTC
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc-C-CeEEEEeCCCCC
Confidence            557899999999999999999999999999999999995             3344555555433 3 357888999999


Q ss_pred             hhhh
Q 032098          142 LSRH  145 (147)
Q Consensus       142 ~~~~  145 (147)
                      .++.
T Consensus        83 ~~~v   86 (281)
T 3s55_A           83 RAAL   86 (281)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.21  E-value=1.2e-11  Score=96.73  Aligned_cols=41  Identities=34%  Similarity=0.371  Sum_probs=38.3

Q ss_pred             CCCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        73 ~~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+.++|+||+++||||++|||+++|+.|+++|++|++++|+
T Consensus         4 ~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~   44 (261)
T 4h15_A            4 IEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARA   44 (261)
T ss_dssp             CCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             hhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECC
Confidence            34568999999999999999999999999999999999997

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.21  E-value=3e-11  Score=94.29  Aligned_cols=66  Identities=17%  Similarity=0.234  Sum_probs=52.3

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +..+.+|+++||||++|||++++++|+++|++|++++|+ +.+++..+++    + ..+.+..+|++|.++.
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dv~d~~~v   89 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI----G-DDALCVPTDVTDPDSV   89 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----T-SCCEEEECCTTSHHHH
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----C-CCeEEEEecCCCHHHH
Confidence            446789999999999999999999999999999999999 6666666655    2 3467788999988764

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.21  E-value=3.9e-11  Score=93.83  Aligned_cols=64  Identities=27%  Similarity=0.377  Sum_probs=52.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++||+++||||++|||++++++|+++|++|++++|+ +.+++..++    .+ ..+.+..+|+++.++.
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~Dv~~~~~v   66 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA----HG-GNAVGVVGDVRSLQDQ   66 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TB-TTEEEEECCTTCHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH----cC-CcEEEEEcCCCCHHHH
Confidence            5789999999999999999999999999999999999 655554433    23 3577888999988754

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.21  E-value=3e-11  Score=94.19  Aligned_cols=72  Identities=22%  Similarity=0.256  Sum_probs=56.2

Q ss_pred             CCCCCCCCCCCeEEEeCCC--ChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           71 SVKREPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        71 ~~~~~~~l~gkv~vVTG~s--~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +...+.++++|+++||||+  +|||+++|+.|+++|++|++++|++ .++..+++.+..+.  +.+..+|+++.+++
T Consensus        17 ~~~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~~~--~~~~~~Dl~~~~~v   90 (280)
T 3nrc_A           17 RGSHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCAEFNP--AAVLPCDVISDQEI   90 (280)
T ss_dssp             -----CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHGGGCC--SEEEECCTTCHHHH
T ss_pred             CCCcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHHhcCC--ceEEEeecCCHHHH
Confidence            3444667899999999988  8899999999999999999999985 44566677666543  67788999988764

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.21  E-value=6.5e-11  Score=90.06  Aligned_cols=69  Identities=19%  Similarity=0.328  Sum_probs=55.5

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccc--cchhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHS--AALSR  144 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dv--s~~~~  144 (147)
                      ..+++||+++||||++|||++++++|+++|++|++++|+ +.+++..+++..... ....+..+|+  ++.++
T Consensus         9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~d~d~~~~~~   80 (247)
T 3i1j_A            9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQ-PQPLIIALNLENATAQQ   80 (247)
T ss_dssp             TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTS-CCCEEEECCTTTCCHHH
T ss_pred             CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCC-CCceEEEeccccCCHHH
Confidence            346899999999999999999999999999999999999 778888888866532 3344555555  66554

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.20  E-value=8.7e-11  Score=91.60  Aligned_cols=69  Identities=20%  Similarity=0.336  Sum_probs=55.4

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hh-HHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ER-VDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~-~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.+++|+++||||++|||++++++|+++|++|++++|+ +. +++..+++... + ..+.+..+|+++.++.
T Consensus        24 ~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   94 (283)
T 1g0o_A           24 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-G-SDAACVKANVGVVEDI   94 (283)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-T-CCEEEEECCTTCHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh-C-CCeEEEEcCCCCHHHH
Confidence            345889999999999999999999999999999999998 43 45556666443 3 3467788999987654

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.20  E-value=8.4e-11  Score=91.71  Aligned_cols=68  Identities=28%  Similarity=0.393  Sum_probs=57.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||+++++.|+++|++|++++|+ +.+++..+++.+. +...+.+..+|++|.++.
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v   93 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL-GAASAHYIAGTMEDMTFA   93 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-TCSEEEEEECCTTCHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-CCCceEEEeCCCCCHHHH
Confidence            5789999999999999999999999999999999999 7777777777554 334578888999987653

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.20  E-value=7.1e-11  Score=95.54  Aligned_cols=70  Identities=23%  Similarity=0.351  Sum_probs=58.3

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hh-------HHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ER-------VDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~-------~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ....++||+++||||++|||++++++|+++|++|++++|+ +.       +++..+++... + ..+.+..+|++|.+++
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~-g-~~~~~~~~Dv~d~~~v  116 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV-G-GKALPCIVDVRDEQQI  116 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT-T-CEEEEEECCTTCHHHH
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc-C-CeEEEEEccCCCHHHH
Confidence            4567899999999999999999999999999999999999 43       56667777554 3 3577888999998764

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.20  E-value=6.3e-11  Score=91.81  Aligned_cols=69  Identities=23%  Similarity=0.295  Sum_probs=54.4

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEe-ecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~-~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+.++|+++||||++|||++++++|+++|++|+++ +|+ +.+++..+++.+. + ..+.+..+|++|.+++
T Consensus        21 ~~m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~v   91 (272)
T 4e3z_A           21 QSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES-G-GEAVAIPGDVGNAADI   91 (272)
T ss_dssp             ---CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-T-CEEEEEECCTTCHHHH
T ss_pred             hhccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc-C-CcEEEEEcCCCCHHHH
Confidence            345678999999999999999999999999999887 555 6667777776543 3 3678889999988754

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.19  E-value=3.9e-11  Score=93.39  Aligned_cols=60  Identities=25%  Similarity=0.348  Sum_probs=48.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+++||||++|||+++|+.|+++|++|+++||+ +.+++    +.++.  ..+.+..+|++|.++.
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~----~~~~~--~~~~~~~~Dv~~~~~v   62 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSAD----FAKER--PNLFYFHGDVADPLTL   62 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHTTC--TTEEEEECCTTSHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHhc--CCEEEEEecCCCHHHH
Confidence            4899999999999999999999999999999999 44443    33332  2467788999998764

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.19  E-value=5.8e-11  Score=91.25  Aligned_cols=70  Identities=21%  Similarity=0.295  Sum_probs=58.0

Q ss_pred             CCCCCCCCeEEEeCCC--ChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s--~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +...+++|+++||||+  +|||++++++|+++|++|++++|++...+..+++.+..+.  +.+..+|+++.++.
T Consensus         8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~Dv~~~~~v   79 (271)
T 3ek2_A            8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGS--ELVFPCDVADDAQI   79 (271)
T ss_dssp             -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTC--CCEEECCTTCHHHH
T ss_pred             CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCC--cEEEECCCCCHHHH
Confidence            3557899999999998  9999999999999999999999995555666777666543  67788999988764

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.19  E-value=8e-11  Score=89.78  Aligned_cols=68  Identities=28%  Similarity=0.347  Sum_probs=55.5

Q ss_pred             CCCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        73 ~~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+..++++|+++||||++|||+++++.|+++|++|++++|+ +.+++..+++.     ..+.+..+|+++.++.
T Consensus         7 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~   75 (249)
T 3f9i_A            7 HHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK-----DNYTIEVCNLANKEEC   75 (249)
T ss_dssp             --CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----SSEEEEECCTTSHHHH
T ss_pred             cccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc-----cCccEEEcCCCCHHHH
Confidence            34567899999999999999999999999999999999999 66666655542     2467888999987654

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.19  E-value=7e-11  Score=91.48  Aligned_cols=65  Identities=18%  Similarity=0.173  Sum_probs=53.6

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeec-C-hhHHHHHHHHHHHhCCceEEEEeccccch
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-S-ERVDSAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r-~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      .+++|+++||||++|||+++++.|+++|++|++++| + +.++++.+++.+..+ ..+.+..+|+++.
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~   74 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA-GSAVLCKGDLSLS   74 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSS
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC-CceEEEeccCCCc
Confidence            468999999999999999999999999999999999 7 777777777765423 3577888999987

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.19  E-value=7.7e-11  Score=90.02  Aligned_cols=68  Identities=26%  Similarity=0.325  Sum_probs=57.1

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++... + ..+.+..+|++|.+++
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~   77 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME-G-HDVSSVVMDVTNTESV   77 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-T-CCEEEEECCTTCHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CceEEEEecCCCHHHH
Confidence            45789999999999999999999999999999999999 6677777777543 2 3477888999987653

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.19  E-value=7.2e-11  Score=91.50  Aligned_cols=69  Identities=29%  Similarity=0.344  Sum_probs=56.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHh-CCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEF-GEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~-~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||+++++.|+++|++|++++|+ +.+++..+++.... ....+.+..+|++|.++.
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   73 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQ   73 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHH
Confidence            4789999999999999999999999999999999999 77777776663211 123577888999987654

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.19  E-value=8.7e-11  Score=91.61  Aligned_cols=68  Identities=12%  Similarity=0.207  Sum_probs=54.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-----------------hhHHHHHHHHHHHhCCceEEEEecc
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-----------------ERVDSAVQSLREEFGEQHVCVTWQH  138 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-----------------~~~~~~~~~l~~~~~~~~v~~~~~D  138 (147)
                      ..++||+++||||++|||+++++.|+++|++|++++|+                 +.+++..+++...  ...+.+..+|
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D   84 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIVTAEVD   84 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEEEEECC
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceEEEEcC
Confidence            45899999999999999999999999999999999875                 3445555555433  3357888999


Q ss_pred             ccchhhh
Q 032098          139 SAALSRH  145 (147)
Q Consensus       139 vs~~~~~  145 (147)
                      ++|.+++
T Consensus        85 v~~~~~v   91 (286)
T 3uve_A           85 VRDYDAL   91 (286)
T ss_dssp             TTCHHHH
T ss_pred             CCCHHHH
Confidence            9998764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.19  E-value=7.4e-11  Score=91.17  Aligned_cols=72  Identities=19%  Similarity=0.209  Sum_probs=54.1

Q ss_pred             CCCCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEee-cC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           72 VKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        72 ~~~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~-r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +..+..+.+|+++||||++|||+++++.|+++|++|++.+ |+ +.+++..+++.+..  ..+.+..+|++|.++.
T Consensus        18 ~~~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~   91 (267)
T 4iiu_A           18 LYFQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANG--GNGRLLSFDVANREQC   91 (267)
T ss_dssp             -------CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHH
T ss_pred             hhhccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CceEEEEecCCCHHHH
Confidence            3334567899999999999999999999999999997755 55 67777777776552  3577888999998764

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.19  E-value=1.4e-10  Score=90.87  Aligned_cols=71  Identities=31%  Similarity=0.434  Sum_probs=59.0

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHh---CCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEF---GEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~---~~~~v~~~~~Dvs~~~~~  145 (147)
                      ...+++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++....   ....+.+..+|+++.++.
T Consensus        13 ~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v   87 (303)
T 1yxm_A           13 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEV   87 (303)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHH
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHH
Confidence            446889999999999999999999999999999999999 77777777776521   123578889999987654

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.19  E-value=4.5e-11  Score=92.59  Aligned_cols=71  Identities=17%  Similarity=0.228  Sum_probs=52.7

Q ss_pred             CCCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        73 ~~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+..++++|+++||||++|||++++++|+++|++|++++++  +.+++..+++...  ...+.+..+|++|.+++
T Consensus        18 ~p~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v   90 (269)
T 3gk3_A           18 GPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA--GRDFKAYAVDVADFESC   90 (269)
T ss_dssp             ------CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT--TCCCEEEECCTTCHHHH
T ss_pred             CchhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHH
Confidence            33456889999999999999999999999999999999955  5555555555332  33577888999988764

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.19  E-value=3.3e-11  Score=92.79  Aligned_cols=70  Identities=21%  Similarity=0.291  Sum_probs=59.3

Q ss_pred             CCCCCCCeEEEeCCC--ChHHHHHHHHHHHCCCEEEEeecC-hh-HHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRS-ER-VDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s--~GIG~~~a~~La~~Ga~Vvi~~r~-~~-~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++||+++||||+  +|||++++++|+++|++|++++++ +. .++..+++.+..+. .+.+..+|++|.++.
T Consensus        15 ~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v   88 (267)
T 3gdg_A           15 QLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGI-KAKAYKCQVDSYESC   88 (267)
T ss_dssp             HHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCC-CEECCBCCTTCHHHH
T ss_pred             ccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCC-ceeEEecCCCCHHHH
Confidence            457899999999999  999999999999999999999998 43 47778888766553 578889999998764

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.19  E-value=1.1e-10  Score=90.46  Aligned_cols=69  Identities=20%  Similarity=0.227  Sum_probs=58.0

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++++|+++||||++|||+++++.|+++|++|++++|+ +.+++..+++.+. + ..+.+..+|++|.++.
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~v   95 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-G-AKVHTFVVDCSNREDI   95 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-T-CCEEEEECCTTCHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc-C-CeEEEEEeeCCCHHHH
Confidence            345889999999999999999999999999999999999 7777777777554 3 3577888999987653

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.19  E-value=1.2e-10  Score=88.64  Aligned_cols=67  Identities=22%  Similarity=0.311  Sum_probs=54.4

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++    +...+.+..+|++|.++.
T Consensus         6 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~   73 (254)
T 2wsb_A            6 VFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL----GAAVAARIVADVTDAEAM   73 (254)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GGGEEEEEECCTTCHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----cccceeEEEEecCCHHHH
Confidence            456899999999999999999999999999999999999 6666655555    222227788999987654

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.18  E-value=4.5e-11  Score=92.72  Aligned_cols=64  Identities=22%  Similarity=0.317  Sum_probs=52.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++    . ..+.+..+|++|.++.
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~v   67 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL----E-AEAIAVVADVSDPKAV   67 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC----C-SSEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----c-CceEEEEcCCCCHHHH
Confidence            4789999999999999999999999999999999999 6555554443    2 3467788999988754

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.18  E-value=4.4e-11  Score=92.17  Aligned_cols=66  Identities=24%  Similarity=0.243  Sum_probs=52.9

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++.    . .+.+..+|++|.++.
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~-~~~~~~~D~~d~~~v   73 (263)
T 3ak4_A            7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE----N-GGFAVEVDVTKRASV   73 (263)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT----T-CCEEEECCTTCHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----c-CCeEEEEeCCCHHHH
Confidence            456889999999999999999999999999999999999 55555444332    1 356778899987653

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.17  E-value=7.2e-11  Score=90.31  Aligned_cols=69  Identities=22%  Similarity=0.306  Sum_probs=57.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+++|+++||||++|||++++++|+++|++|++++|+ +...+..+++.+..+. .+.+..+|++|.++.
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~~   79 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGV-KTKAYQCDVSNTDIV   79 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTC-CEEEEECCTTCHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCC-eeEEEEeeCCCHHHH
Confidence            45789999999999999999999999999999999997 6666666777655443 477888999987653

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.17  E-value=8.1e-11  Score=91.99  Aligned_cols=66  Identities=23%  Similarity=0.276  Sum_probs=52.8

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccc
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAA  141 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~  141 (147)
                      ..++++|+++||||++|||+++++.|+++|++|++++|+  +.+++..+++....+ ..+.+..+|+++
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~   85 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS-NTAVVCQADLTN   85 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSC
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcC-CceEEEEeecCC
Confidence            456889999999999999999999999999999999998  456666777753433 357788899999

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.17  E-value=1.4e-10  Score=89.18  Aligned_cols=69  Identities=26%  Similarity=0.395  Sum_probs=57.5

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.+++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++... + ..+.+..+|+++.++.
T Consensus         9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   78 (266)
T 1xq1_A            9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK-G-FQVTGSVCDASLRPER   78 (266)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-T-CCEEEEECCTTSHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CeeEEEECCCCCHHHH
Confidence            346889999999999999999999999999999999999 7777777777554 2 3477888999987653

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.17  E-value=1e-10  Score=89.02  Aligned_cols=68  Identities=21%  Similarity=0.304  Sum_probs=56.8

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++... + ..+.+..+|++|.++.
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   75 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-G-GQAFACRCDITSEQEL   75 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT-T-CCEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh-C-CceEEEEcCCCCHHHH
Confidence            45789999999999999999999999999999999999 7777777777543 3 2467788999987653

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.17  E-value=1.2e-10  Score=92.72  Aligned_cols=69  Identities=19%  Similarity=0.301  Sum_probs=55.0

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-------------hhHHHHHHHHHHHhCCceEEEEeccccc
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-------------ERVDSAVQSLREEFGEQHVCVTWQHSAA  141 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-------------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~  141 (147)
                      +.+++||+++||||++|||+++++.|+++|++|++++++             +.+++..+++... + ..+.+..+|++|
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~d  118 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ-G-RRIIARQADVRD  118 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT-T-CCEEEEECCTTC
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc-C-CeEEEEECCCCC
Confidence            556899999999999999999999999999999999874             3445555555443 3 357888999998


Q ss_pred             hhhh
Q 032098          142 LSRH  145 (147)
Q Consensus       142 ~~~~  145 (147)
                      .+++
T Consensus       119 ~~~v  122 (317)
T 3oec_A          119 LASL  122 (317)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.16  E-value=1.9e-10  Score=87.15  Aligned_cols=68  Identities=29%  Similarity=0.392  Sum_probs=56.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++....+. .+.+..+|++|.++.
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~   72 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGV-KAHGVEMNLLSEESI   72 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCC-ceEEEEccCCCHHHH
Confidence            5789999999999999999999999999999999999 6777777777553333 477788999987653

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.16  E-value=1.1e-10  Score=89.72  Aligned_cols=64  Identities=19%  Similarity=0.275  Sum_probs=53.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++    + ..+.+..+|++|.++.
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~v   67 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----G-ERSMFVRHDVSSEADW   67 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----C-TTEEEECCCTTCHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C-CceEEEEccCCCHHHH
Confidence            4789999999999999999999999999999999999 6666655554    2 2467788999987653

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.16  E-value=1.9e-10  Score=89.07  Aligned_cols=69  Identities=25%  Similarity=0.224  Sum_probs=56.5

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++... + ..+.+..+|++|.++.
T Consensus        29 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~   98 (279)
T 3ctm_A           29 LFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY-G-VHSKAYKCNISDPKSV   98 (279)
T ss_dssp             GGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH-C-SCEEEEECCTTCHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CcceEEEeecCCHHHH
Confidence            456899999999999999999999999999999999999 6666666655443 3 3477888999987653

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.16  E-value=1.7e-10  Score=88.04  Aligned_cols=67  Identities=25%  Similarity=0.339  Sum_probs=55.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEe-ecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~-~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||+++++.|+++|++|+++ +++ +.+++..+++...  ...+.+..+|+++.++.
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~   72 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGV   72 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT--TCEEEEEECCTTSHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc--CCceEEEecCcCCHHHH
Confidence            5889999999999999999999999999999886 455 7777777777654  33577888999987653

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.16  E-value=9e-11  Score=90.29  Aligned_cols=64  Identities=22%  Similarity=0.311  Sum_probs=52.6

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++    + ..+.+..+|+++.++.
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~~   66 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----G-DAARYQHLDVTIEEDW   66 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----G-GGEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----C-CceeEEEecCCCHHHH
Confidence            3689999999999999999999999999999999999 6665555444    2 2467788999987653

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.15  E-value=1.4e-10  Score=90.56  Aligned_cols=69  Identities=25%  Similarity=0.226  Sum_probs=57.3

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.+++|+++||||++|||+++++.|+++|++|++.+|+ +.+++..+++... + ..+.+..+|++|.++.
T Consensus        39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~d~~~v  108 (285)
T 2c07_A           39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF-G-YESSGYAGDVSKKEEI  108 (285)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT-T-CCEEEEECCTTCHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-C-CceeEEECCCCCHHHH
Confidence            456889999999999999999999999999999999988 6777777777543 2 3477888999987654

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.15  E-value=1.5e-10  Score=88.64  Aligned_cols=65  Identities=15%  Similarity=0.261  Sum_probs=54.5

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++    + ..+.+..+|++|.+++
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~v   73 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL----G-NNCVFAPADVTSEKDV   73 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH----C-TTEEEEECCTTCHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh----C-CceEEEEcCCCCHHHH
Confidence            45889999999999999999999999999999999999 6666665554    2 2477888999987654

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.15  E-value=1.3e-10  Score=93.01  Aligned_cols=66  Identities=17%  Similarity=0.193  Sum_probs=55.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEee-cC-hhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RS-ERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~-r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      ++++|+++||||++|||+++++.|+++|++|++++ |+ +.++++.+++....+ ..+.+..+|+++.+
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~d~~  110 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVA  110 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC-CeEEEEEeeCCCch
Confidence            47899999999999999999999999999999999 88 777777777753433 35778889999876

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.14  E-value=1.4e-10  Score=89.54  Aligned_cols=64  Identities=14%  Similarity=0.227  Sum_probs=53.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++..     .+.+..+|+++.++.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~v   68 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD-----AARYVHLDVTQPAQW   68 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG-----GEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc-----CceEEEecCCCHHHH
Confidence            4789999999999999999999999999999999999 666655555421     367788999987653

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.14  E-value=1.1e-10  Score=90.66  Aligned_cols=64  Identities=20%  Similarity=0.343  Sum_probs=52.1

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++    .  .+.+..+|++|.++.
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~Dv~d~~~v   69 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----P--GAVFILCDVTQEDDV   69 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----T--TEEEEECCTTSHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----c--CCeEEEcCCCCHHHH
Confidence            35789999999999999999999999999999999999 5555444333    2  266788999988754

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.14  E-value=1.2e-10  Score=90.52  Aligned_cols=67  Identities=19%  Similarity=0.287  Sum_probs=55.4

Q ss_pred             CCCCCeEEEeCCC--ChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s--~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||+  +|||+++++.|+++|++|++++|++..++..+++.+..+.  +.+..+|+++.+++
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~--~~~~~~D~~~~~~v   71 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNS--PYVYELDVSKEEHF   71 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEcCCCCHHHH
Confidence            4789999999999  9999999999999999999999994356666777665443  56788999987654

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.13  E-value=1.2e-10  Score=89.08  Aligned_cols=62  Identities=27%  Similarity=0.377  Sum_probs=50.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++    +   +.+..+|++|.++.
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~---~~~~~~D~~~~~~~   64 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV----G---AHPVVMDVADPASV   64 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----T---CEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C---CEEEEecCCCHHHH
Confidence            4789999999999999999999999999999999999 5555444332    2   56677899987653

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.13  E-value=2.1e-10  Score=88.12  Aligned_cols=64  Identities=22%  Similarity=0.318  Sum_probs=54.2

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+++||||++|||++++++|+++|++|++++|+ +.+++..+++... + ..+.+..+|++|.++.
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~v   66 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA-G-GHAVAVKVDVSDRDQV   66 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-T-CCEEEEECCTTSHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEEecCCCHHHH
Confidence            6899999999999999999999999999999999 7777777777543 3 2467788999988754

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.13  E-value=1.3e-10  Score=88.24  Aligned_cols=66  Identities=27%  Similarity=0.381  Sum_probs=54.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++...   ..+.+..+|+++.++.
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~   69 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP---DQIQFFQHDSSDEDGW   69 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc---CceEEEECCCCCHHHH
Confidence            4789999999999999999999999999999999999 6666655555321   3477888999987653

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.13  E-value=2.5e-10  Score=87.70  Aligned_cols=69  Identities=23%  Similarity=0.283  Sum_probs=56.6

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeec-C-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-S-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r-~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.+++|+++||||++|||++++++|+++|++|++++| + +.+++..+++... + ..+.+..+|++|.++.
T Consensus        16 ~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~   86 (274)
T 1ja9_A           16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL-G-AQGVAIQADISKPSEV   86 (274)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-T-CCEEEEECCTTSHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc-C-CcEEEEEecCCCHHHH
Confidence            34588999999999999999999999999999999999 5 6666777777543 3 3467788999987653

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.13  E-value=1.9e-10  Score=88.51  Aligned_cols=62  Identities=24%  Similarity=0.427  Sum_probs=50.3

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++|+++||||++|||++++++|+++|++|++++|+ +. ++..+++    .  . .+..+|++|.++.
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~----~--~-~~~~~D~~~~~~~   64 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI----G--G-AFFQVDLEDERER   64 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH----T--C-EEEECCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh----h--C-CEEEeeCCCHHHH
Confidence            35789999999999999999999999999999999999 54 5444444    2  2 5677899887653

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.12  E-value=1.9e-10  Score=87.99  Aligned_cols=67  Identities=22%  Similarity=0.326  Sum_probs=55.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeec-C-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-S-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r-~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||++++++|+++|++|++++| + +.+++..+++... + ..+.+..+|+++.++.
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~   72 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-G-GEAIAVKGDVTVESDV   72 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-T-CEEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-C-CceEEEECCCCCHHHH
Confidence            478999999999999999999999999999999999 6 6667777777543 3 3577888999987653

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.12  E-value=3.1e-10  Score=87.44  Aligned_cols=68  Identities=19%  Similarity=0.256  Sum_probs=54.5

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.+++|+++||||++|||++++++|+++|++|++++|+ +..++..+++..   ...+.+..+|++|.++.
T Consensus        11 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~   79 (278)
T 2bgk_A           11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDV   79 (278)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHH
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC---CCceEEEECCCCCHHHH
Confidence            345789999999999999999999999999999999999 555555555421   12577888999987754

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.12  E-value=2.8e-10  Score=86.26  Aligned_cols=67  Identities=22%  Similarity=0.374  Sum_probs=54.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEe-ecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~-~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||++++++|+++|++|+++ +|+ +.+++..+++... + ..+.+..+|++|.++.
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   70 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA-G-INVVVAKGDVKNPEDV   70 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT-T-CCEEEEESCTTSHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc-C-CcEEEEECCCCCHHHH
Confidence            4789999999999999999999999999999998 556 6667766666543 2 3577888999987654

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.11  E-value=2.9e-10  Score=86.98  Aligned_cols=67  Identities=19%  Similarity=0.247  Sum_probs=52.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCE-EEEeecChhHHHHHHHHHHHhCCceEEEEeccccch-hh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAAL-SR  144 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~-Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~-~~  144 (147)
                      ++++|+++||||++|||++++++|+++|++ |++++|++.. +..+++.+..+...+.+..+|++|. ++
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~-~~~~~l~~~~~~~~~~~~~~D~~~~~~~   70 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP-TALAELKAINPKVNITFHTYDVTVPVAE   70 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH-HHHHHHHHHCTTSEEEEEECCTTSCHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH-HHHHHHHHhCCCceEEEEEEecCCChHH
Confidence            478999999999999999999999999996 9999998321 3345555544344678888999987 53

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.11  E-value=1.7e-10  Score=88.35  Aligned_cols=69  Identities=19%  Similarity=0.203  Sum_probs=53.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHh-----CCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEF-----GEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~-----~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||+++++.|+++|++|++++|+ +.+++..+++....     +...+.+..+|++|.++.
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   78 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAA   78 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHH
Confidence            4789999999999999999999999999999999999 66666665554321     013467788999987653

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.11  E-value=1.9e-10  Score=88.39  Aligned_cols=64  Identities=11%  Similarity=0.263  Sum_probs=53.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hh--HHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ER--VDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~--~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+++||||++|||+++++.|+++|++|++++|+ +.  +++..+++... + ..+.+..+|+++.+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~~~~v   68 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA-D-QKAVFVGLDVTDKANF   68 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT-T-CCEEEEECCTTCHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc-C-CcEEEEEccCCCHHHH
Confidence            6899999999999999999999999999999999 55  66666676543 2 3577888999988754

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.11  E-value=1.4e-10  Score=90.54  Aligned_cols=66  Identities=24%  Similarity=0.346  Sum_probs=53.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..++ |+++||||++|||++++++|+++|++|++++|+ +.+++..+++...   ..+.+..+|++|.++.
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v   84 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAM   84 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHH
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHH
Confidence            3456 999999999999999999999999999999999 7777766666432   3477888999988754

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.11  E-value=2.5e-10  Score=86.84  Aligned_cols=67  Identities=33%  Similarity=0.445  Sum_probs=56.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||++++++|+++|++|++++|+  +.+++..+++... + ..+.+..+|++|.++.
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~   72 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD-G-GDAAFFAADLATSEAC   72 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT-T-CEEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc-C-CceEEEECCCCCHHHH
Confidence            4689999999999999999999999999999999998  5666777777543 2 3577888999988754

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.11  E-value=2.2e-10  Score=89.33  Aligned_cols=67  Identities=22%  Similarity=0.366  Sum_probs=55.4

Q ss_pred             CCCCCeEEEeCCC--ChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s--~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++||+++||||+  +|||+++++.|+++|++|++++|++..++..+++.+..+.  +.+..+|+++.+++
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~--~~~~~~Dl~~~~~v   86 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGS--DLVVKCDVSLDEDI   86 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTC--CCEEECCTTCHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCC--eEEEEcCCCCHHHH
Confidence            4889999999999  9999999999999999999999995456666777665443  56778999987654

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.11  E-value=1.3e-10  Score=88.95  Aligned_cols=69  Identities=14%  Similarity=0.185  Sum_probs=53.0

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEee-cC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~-r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ....++|+++||||++|||++++++|+++|++|++.+ ++ +..++..+++... + ..+.+..+|++|.++.
T Consensus         8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~~~~v   78 (256)
T 3ezl_A            8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL-G-FDFYASEGNVGDWDST   78 (256)
T ss_dssp             -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT-T-CCCEEEECCTTCHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-C-CeeEEEecCCCCHHHH
Confidence            4568899999999999999999999999999999988 44 6667777776544 2 3577888999987754

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.10  E-value=2.5e-10  Score=87.99  Aligned_cols=67  Identities=22%  Similarity=0.369  Sum_probs=55.3

Q ss_pred             CCCCCeEEEeCCC--ChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s--~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||+  +|||+++++.|+++|++|++++|++..++..+++.+..+.  +.+..+|++|.++.
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~--~~~~~~D~~~~~~v   73 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGG--ALLFRADVTQDEEL   73 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTC--CEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC--cEEEECCCCCHHHH
Confidence            4789999999999  9999999999999999999999995455566677655443  56788999987754

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.10  E-value=2.3e-10  Score=87.90  Aligned_cols=68  Identities=16%  Similarity=0.176  Sum_probs=52.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.+|+++||||++|||++++++|+++|++|++++++ +...+..+++....+ ..+.+..+|++|.+++
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v   72 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVE-ERLQFVQADVTKKEDL   72 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGG-GGEEEEECCTTSHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC-CceEEEEecCCCHHHH
Confidence            3567999999999999999999999999999999887 444444444333333 3588889999998764

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.10  E-value=3e-10  Score=86.79  Aligned_cols=66  Identities=27%  Similarity=0.373  Sum_probs=55.5

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHH-CCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~-~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++|+++||||++|||+++++.|++ .|++|++++|+ +.+++..+++... + ..+.+..+|+++.++.
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~~   69 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-G-LSPRFHQLDIDDLQSI   69 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT-T-CCCEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc-C-CeeEEEECCCCCHHHH
Confidence            4689999999999999999999999 99999999999 7777777777654 2 3467788999987653

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.09  E-value=2.5e-10  Score=87.59  Aligned_cols=65  Identities=23%  Similarity=0.377  Sum_probs=52.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++|+++||||++|||++++++|+++|++|++++|++. ++..+++... + ..+.+..+|++|.++.
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~l~~~-~-~~~~~~~~D~~~~~~v   66 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP-APALAEIARH-G-VKAVHHPADLSDVAQI   66 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHHTT-S-CCEEEECCCTTSHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHhc-C-CceEEEeCCCCCHHHH
Confidence            67899999999999999999999999999999999933 4555566432 2 3467788999988754

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.09  E-value=3e-10  Score=87.62  Aligned_cols=67  Identities=18%  Similarity=0.325  Sum_probs=54.7

Q ss_pred             CCCCCeEEEeCCC--ChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s--~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||+  +|||++++++|+++|++|++++|++..++..+++.+..+.  ..+..+|+++.++.
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~--~~~~~~D~~~~~~v   74 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGS--DIVLQCDVAEDASI   74 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEECCTTCHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCC--cEEEEccCCCHHHH
Confidence            3789999999999  9999999999999999999999985455566667655443  26778899987654

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.07  E-value=2.3e-10  Score=87.93  Aligned_cols=62  Identities=24%  Similarity=0.343  Sum_probs=46.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++|+++||||++|||++++++|+++|++|++++|+ ++.   .+++    + ..+.+..+|++|.+++
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~----~-~~~~~~~~D~~~~~~v   67 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADL----G-DRARFAAADVTDEAAV   67 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHHT----C-TTEEEEECCTTCHHHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHhc----C-CceEEEECCCCCHHHH
Confidence            46899999999999999999999999999999999997 322   2222    2 3577888999988764

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.07  E-value=1.4e-10  Score=88.54  Aligned_cols=62  Identities=18%  Similarity=0.224  Sum_probs=49.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++||||++|||++++++|+++|++|++++|+ +.+++.. ++    .  .+.+..+|+++.++.
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~--~~~~~~~D~~~~~~~   65 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----P--GIQTRVLDVTKKKQI   65 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----T--TEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----c--CceEEEeeCCCHHHH
Confidence            4789999999999999999999999999999999998 4443322 21    1  467788899987653

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.07  E-value=2.8e-10  Score=88.27  Aligned_cols=64  Identities=27%  Similarity=0.281  Sum_probs=51.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++.+|+++||||++|||++++++|+++|++|++++|+ +.+++..+++    + ..+.+..+|++|.++.
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dv~~~~~~   66 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY----P-DRAEAISLDVTDGERI   66 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC----T-TTEEEEECCTTCHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----c-CCceEEEeeCCCHHHH
Confidence            3578999999999999999999999999999999999 6655544332    2 3477888999987654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.06  E-value=7.3e-10  Score=84.81  Aligned_cols=64  Identities=23%  Similarity=0.366  Sum_probs=51.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecCh--hHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSE--RVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~--~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||+++++.|+++|++|++++|++  .+++   ++.+ .+ ..+.+..+|++|.+++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~-~~-~~~~~~~~Dv~~~~~v   69 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRN-LG-RRVLTVKCDVSQPGDV   69 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHH-TT-CCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHh-cC-CcEEEEEeecCCHHHH
Confidence            47899999999999999999999999999999999983  3332   3432 23 3577788999988754

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.05  E-value=6.7e-10  Score=88.88  Aligned_cols=67  Identities=19%  Similarity=0.241  Sum_probs=50.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC------hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||++|||++++++|+++|++|++++|+      +.++++.+++... + ..+.+..+|++|.+++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~-~-~~~~~~~~Dvtd~~~v   74 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN-D-VDLRTLELDVQSQVSV   74 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH-T-CCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc-C-CcEEEEEeecCCHHHH
Confidence            4678999999999999999999999999999988775      3344444444333 3 3578889999988764

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.04  E-value=5.3e-10  Score=84.68  Aligned_cols=64  Identities=25%  Similarity=0.323  Sum_probs=50.5

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++++|+++||||++|||+++++.|+++|++|++++|+ +.+++..+++    ..  +.+..+|+++.++.
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~--~~~~~~D~~~~~~~   67 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----PG--IEPVCVDLGDWEAT   67 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TT--CEEEECCTTCHHHH
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CC--CCEEEEeCCCHHHH
Confidence            45889999999999999999999999999999999999 5555444332    22  23458899887653

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.04  E-value=2.2e-10  Score=86.56  Aligned_cols=60  Identities=23%  Similarity=0.351  Sum_probs=49.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |+++||||++|||++++++|+++|++|++++|+ +.+++..+++     ...+.+..+|+++.++.
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v   62 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASHQEV   62 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCHHHH
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCHHHH
Confidence            689999999999999999999999999999999 6666655544     23466778899988754

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.04  E-value=6.8e-10  Score=84.25  Aligned_cols=65  Identities=23%  Similarity=0.339  Sum_probs=52.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+++||||++|||++++++|+++|++|++++|+ +.+++..+++....+ ..+.+..+|++|.++.
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~   67 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA-DKVLRVRADVADEGDV   67 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTG-GGEEEEECCTTCHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHH
Confidence            6899999999999999999999999999999999 666666666522222 3577888999987654

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.02  E-value=1.2e-09  Score=82.64  Aligned_cols=64  Identities=23%  Similarity=0.321  Sum_probs=52.4

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEe-ecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~-~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ||+++||||++|||++++++|+++|++|+++ +|+ +.+++..+++... +. .+.+..+|+++.++.
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~   66 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-GG-QAITFGGDVSKEADV   66 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-TC-EEEEEECCTTSHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CC-cEEEEeCCCCCHHHH
Confidence            6899999999999999999999999999985 787 6666666676544 33 577788999987653

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.02  E-value=2.6e-10  Score=88.66  Aligned_cols=61  Identities=23%  Similarity=0.305  Sum_probs=48.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.+|+++||||++|||++++++|+++|++|++++|+ +.+++.        ....+.+..+|++|.++.
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~Dv~d~~~v   74 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL--------NLPNTLCAQVDVTDKYTF   74 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT--------CCTTEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh--------hcCCceEEEecCCCHHHH
Confidence            4779999999999999999999999999999999998 443321        122467778899887654

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.00  E-value=7.9e-10  Score=84.79  Aligned_cols=70  Identities=17%  Similarity=0.266  Sum_probs=52.0

Q ss_pred             CCCCCCCCCeEEEeCCCChHHHHHHHHHHHCC---CEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAG---DNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        73 ~~~~~l~gkv~vVTG~s~GIG~~~a~~La~~G---a~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+...+++|+++||||++|||++++++|++.|   ++|++++|+ +.+++ .+++... + ..+.+..+|+++.++.
T Consensus        14 ~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~-~~~l~~~-~-~~~~~~~~Dl~~~~~v   87 (267)
T 1sny_A           14 LVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKN-H-SNIHILEIDLRNFDAY   87 (267)
T ss_dssp             ------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-HHHHHHH-C-TTEEEEECCTTCGGGH
T ss_pred             ccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHH-HHHhhcc-C-CceEEEEecCCChHHH
Confidence            34557899999999999999999999999999   999999999 54443 3455444 2 2477888999988754

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.00  E-value=7.4e-10  Score=85.04  Aligned_cols=60  Identities=27%  Similarity=0.477  Sum_probs=50.0

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |+++||||++|||++++++|+++|++|++++|+ +.+++..+++    + ..+.+..+|++|.++.
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dv~~~~~v   61 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----G-DNLYIAQLDVRNRAAI   61 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----C-TTEEEEECCTTCHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----c-CceEEEEcCCCCHHHH
Confidence            689999999999999999999999999999999 6666655554    2 2467788999987754

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.00  E-value=1.1e-09  Score=82.85  Aligned_cols=64  Identities=19%  Similarity=0.242  Sum_probs=49.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++++|+++||||++|||++++++|+++|++|++++|+ +.+++..++    ...  +.+..+|+++.++.
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~--~~~~~~D~~~~~~~   67 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE----CPG--IEPVCVDLGDWDAT   67 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----STT--CEEEECCTTCHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----ccC--CCcEEecCCCHHHH
Confidence            35789999999999999999999999999999999999 555444332    222  33458899887653

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.00  E-value=9.5e-10  Score=83.27  Aligned_cols=64  Identities=27%  Similarity=0.338  Sum_probs=53.6

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCC-------EEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGD-------NVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga-------~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+++||||++|||+++++.|+++|+       +|++++|+ +.+++..+++...  ...+.+..+|+++.++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v   73 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADV   73 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc--CCeeeEEEecCCCHHHH
Confidence            68999999999999999999999999       99999999 6777776666533  23577888999987653

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=98.98  E-value=6.3e-10  Score=86.49  Aligned_cols=40  Identities=23%  Similarity=0.409  Sum_probs=36.5

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +...++||+++||||++|||++++++|+++|++|++++|+
T Consensus         8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~   47 (269)
T 3vtz_A            8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLD   47 (269)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            3567899999999999999999999999999999999987

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=98.98  E-value=4.2e-10  Score=86.86  Aligned_cols=39  Identities=44%  Similarity=0.641  Sum_probs=34.0

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..++++|+++||||++|||++++++|+++|++|++++|+
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   54 (253)
T 2nm0_A           16 PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRS   54 (253)
T ss_dssp             ----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            456889999999999999999999999999999999887

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=98.98  E-value=1.6e-09  Score=81.75  Aligned_cols=65  Identities=25%  Similarity=0.351  Sum_probs=51.7

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEe-ecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~-~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+++||||++|||++++++|+++|++|+++ +|+ +.+++..+++... +.....+..+|+++.++.
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~   67 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR-GSPLVAVLGANLLEAEAA   67 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT-TCSCEEEEECCTTSHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCceEEEEeccCCCHHHH
Confidence            5799999999999999999999999999998 788 6677777776543 333333378899987653

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=98.98  E-value=7.2e-10  Score=85.78  Aligned_cols=64  Identities=11%  Similarity=0.206  Sum_probs=50.5

Q ss_pred             CCCCCeEEEeCC--CChHHHHHHHHHHHCCCEEEEeecC-hh-HHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRS-ER-VDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~--s~GIG~~~a~~La~~Ga~Vvi~~r~-~~-~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++|+++||||  ++|||+++++.|+++|++|++++|+ +. +++..    ++.+. .+.+..+|++|.++.
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~-~~~~~~~Dv~~~~~v   71 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT----DRLPA-KAPLLELDVQNEEHL   71 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH----TTSSS-CCCEEECCTTCHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHH----HhcCC-CceEEEccCCCHHHH
Confidence            478999999999  9999999999999999999999998 43 23332    22232 456778899987754

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=98.98  E-value=1e-09  Score=82.74  Aligned_cols=61  Identities=25%  Similarity=0.232  Sum_probs=48.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+|+++||||++|||++++++|+++|++|++++|+ +.+++..+++    .  .+.+..+|++|.++.
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~~~   65 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL----E--GALPLPGDVREEGDW   65 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T--TCEEEECCTTCHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----h--hceEEEecCCCHHHH
Confidence            47899999999999999999999999999999999 5555444333    2  356677899887653

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=98.97  E-value=1.7e-10  Score=89.33  Aligned_cols=59  Identities=20%  Similarity=0.239  Sum_probs=46.3

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      ++.+++|+++||||++|||++++++|+++|++|++++|+ +...           ...+.+..+|++|.++
T Consensus        23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d~~~   82 (260)
T 3un1_A           23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISKPET   82 (260)
T ss_dssp             HHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTSHHH
T ss_pred             hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCCHHH
Confidence            456899999999999999999999999999999999998 3211           1135566667766654

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=98.94  E-value=2.1e-09  Score=82.52  Aligned_cols=61  Identities=18%  Similarity=0.209  Sum_probs=49.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCC--CEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ||+++||||++|||++++++|+++|  +.|++.+|+ +.+++..+++    + ..+.+..+|++|.+++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dv~~~~~v   65 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY----G-DRFFYVVGDITEDSVL   65 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH----G-GGEEEEESCTTSHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh----C-CceEEEECCCCCHHHH
Confidence            6899999999999999999999985  789999999 6666555444    2 3578889999998764

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=98.93  E-value=1.9e-09  Score=93.13  Aligned_cols=54  Identities=22%  Similarity=0.333  Sum_probs=42.7

Q ss_pred             CCCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeec---------C-hhHHHHHHHHHHH
Q 032098           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR---------S-ERVDSAVQSLREE  126 (147)
Q Consensus        73 ~~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r---------~-~~~~~~~~~l~~~  126 (147)
                      .+..+++||+++||||++|||+++|+.|+++|++|++++|         + +.++++.+++...
T Consensus        12 ~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~   75 (613)
T 3oml_A           12 DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA   75 (613)
T ss_dssp             ---CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh
Confidence            3456799999999999999999999999999999999988         5 6677777888655

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=98.93  E-value=4.2e-09  Score=84.01  Aligned_cols=63  Identities=24%  Similarity=0.357  Sum_probs=48.8

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeec---------C-hhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR---------S-ERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r---------~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      ++++||+++||||++|||+++++.|+++|++|+++++         + +.+++..+++... +. .+   .+|+++.+
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~-~~-~~---~~D~~~~~   77 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-GG-KA---VANYDSVE   77 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-TC-EE---EEECCCGG
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh-CC-eE---EEeCCCHH
Confidence            4689999999999999999999999999999999754         5 6677777777654 22 22   24555554

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.93  E-value=1.7e-09  Score=81.57  Aligned_cols=63  Identities=24%  Similarity=0.418  Sum_probs=50.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCC--CEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |++|+++||||++|||+++++.|+++|  ++|++++|+ +.++++ .++    ....+.+..+|+++.++.
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l-~~~----~~~~~~~~~~D~~~~~~~   66 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL-KSI----KDSRVHVLPLTVTCDKSL   66 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH-HTC----CCTTEEEEECCTTCHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHH-Hhc----cCCceEEEEeecCCHHHH
Confidence            467899999999999999999999999  999999999 555433 222    233577888999987653

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=98.90  E-value=2.1e-09  Score=83.22  Aligned_cols=37  Identities=38%  Similarity=0.525  Sum_probs=35.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ++++|+++||||++|||+++++.|+++|++|++++|+
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   41 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIH   41 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecC
Confidence            4789999999999999999999999999999999887

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.88  E-value=4.6e-09  Score=90.69  Aligned_cols=66  Identities=24%  Similarity=0.296  Sum_probs=51.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccc-cchhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHS-AALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dv-s~~~~  144 (147)
                      ..++||+++||||++|||+++|+.|+++|++|++++++ .++++.+++.+. +. .+....+|+ ++.++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~-~~~~~~~~i~~~-g~-~~~~~~~Dv~~~~~~  384 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK-DATKTVDEIKAA-GG-EAWPDQHDVAKDSEA  384 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS-CCHHHHHHHHHT-TC-EEEEECCCHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc-cHHHHHHHHHhc-CC-eEEEEEcChHHHHHH
Confidence            46899999999999999999999999999999999875 234556666543 33 466778888 65543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=98.87  E-value=4.8e-09  Score=79.10  Aligned_cols=62  Identities=16%  Similarity=0.178  Sum_probs=43.1

Q ss_pred             CCCCCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceE-EEEecccc
Q 032098           71 SVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHV-CVTWQHSA  140 (147)
Q Consensus        71 ~~~~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v-~~~~~Dvs  140 (147)
                      ...+...++||+++||||+++||.+++++|+++|++|++++|+ +.+++..    ..    .+ .+..+|++
T Consensus        12 ~~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~----~~----~~~~~~~~Dl~   75 (236)
T 3e8x_A           12 SGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR----ER----GASDIVVANLE   75 (236)
T ss_dssp             ---------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH----HT----TCSEEEECCTT
T ss_pred             ccccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH----hC----CCceEEEcccH
Confidence            3344567899999999999999999999999999999999999 5544322    21    24 56677775

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.86  E-value=6.2e-09  Score=89.90  Aligned_cols=67  Identities=21%  Similarity=0.318  Sum_probs=50.3

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC----------hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS----------ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~----------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      ++++||+++||||++|||+++|+.|+++|++|++++++          +.++++.+++.+. +. ....+..|+.+.++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~-g~-~~~~d~~d~~~~~~   80 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN-GG-VAVADYNNVLDGDK   80 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT-TC-EEEEECCCTTCHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc-CC-eEEEEcCCHHHHHH
Confidence            35789999999999999999999999999999999874          3466667777554 33 33455556655443

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=98.85  E-value=2.8e-09  Score=88.66  Aligned_cols=65  Identities=14%  Similarity=0.051  Sum_probs=50.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHH-CCCEEEEeecC-hhHH------------HHHHHHHHHhCCceEEEEeccccchhh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRS-ERVD------------SAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~-~Ga~Vvi~~r~-~~~~------------~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .+|+++||||++|||+++|+.|++ +|++|++++|+ +.++            ...+++.+ .+. .+....+|+++.++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~-~G~-~a~~i~~Dvtd~~~  137 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA-AGL-YSKSINGDAFSDAA  137 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH-TTC-CEEEEESCTTSHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHh-cCC-cEEEEEecCCCHHH
Confidence            489999999999999999999999 99999999998 4322            12244433 343 46778899998875


Q ss_pred             h
Q 032098          145 H  145 (147)
Q Consensus       145 ~  145 (147)
                      .
T Consensus       138 v  138 (422)
T 3s8m_A          138 R  138 (422)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=98.85  E-value=8.7e-09  Score=79.93  Aligned_cols=41  Identities=27%  Similarity=0.380  Sum_probs=35.0

Q ss_pred             CCCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        73 ~~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+++++||+++||||++|||++++++|+++|++|++++|+
T Consensus        21 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~   61 (266)
T 3uxy_A           21 QSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRA   61 (266)
T ss_dssp             -----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSC
T ss_pred             hhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            34567899999999999999999999999999999999886

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=98.85  E-value=1.5e-09  Score=81.74  Aligned_cols=38  Identities=29%  Similarity=0.282  Sum_probs=33.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +++++|+++||||++|||++++++|+++|++|++++|+
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~   39 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQ   39 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGG
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCC
Confidence            45789999999999999999999999999999999886

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=98.84  E-value=1.7e-08  Score=84.48  Aligned_cols=66  Identities=18%  Similarity=0.255  Sum_probs=50.3

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+++|+++||||++|||+++++.|+++|++|++++|++..++..+ +..+.+   +.+..+|++|.++.
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~-~~~~~~---~~~~~~Dvtd~~~v  274 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKR-VADKVG---GTALTLDVTADDAV  274 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-HHHHHT---CEEEECCTTSTTHH
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHH-HHHHcC---CeEEEEecCCHHHH
Confidence            3578999999999999999999999999999999999733333322 223333   34678899987654

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=98.83  E-value=3.8e-09  Score=80.35  Aligned_cols=37  Identities=16%  Similarity=0.065  Sum_probs=34.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +.++|+++||||++|||++++++|+++|++|++++|+
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   40 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVV   40 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence            4678999999999999999999999999999999998

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=98.83  E-value=4.9e-09  Score=80.23  Aligned_cols=37  Identities=41%  Similarity=0.578  Sum_probs=35.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ++++|+++||||++|||+++++.|+++|++|++++|+
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~   40 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQA   40 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCc
Confidence            5789999999999999999999999999999999987

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=98.83  E-value=2.6e-09  Score=81.77  Aligned_cols=38  Identities=34%  Similarity=0.639  Sum_probs=35.6

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+++|+++||||++|||++++++|+++|++|++++|+
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   48 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG   48 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999999999999999999999999999887

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=98.83  E-value=3.1e-09  Score=84.91  Aligned_cols=67  Identities=15%  Similarity=0.085  Sum_probs=49.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHh----CCceEEEEeccccchhhh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEF----GEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~----~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++|+++|||+++|||++++++|+++|++|++++|+ +.+++..+.+....    ....+.+..+|++|.+++
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v   72 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSV   72 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHH
Confidence            47899999999999999999999999999988877 43333333332211    123577888999988764

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=98.81  E-value=9e-09  Score=81.12  Aligned_cols=67  Identities=19%  Similarity=0.203  Sum_probs=52.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+++++||||+++||.+++++|+++|++|++++|+ +...+..+++....+. .+.+..+|++|.++.
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~~   70 (341)
T 3enk_A            3 STKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGK-TPAFHETDVSDERAL   70 (341)
T ss_dssp             CSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSC-CCEEECCCTTCHHHH
T ss_pred             CCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCC-CceEEEeecCCHHHH
Confidence            356899999999999999999999999999999998 5555555555544333 466778899887653

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=98.81  E-value=5.9e-09  Score=79.35  Aligned_cols=59  Identities=19%  Similarity=0.211  Sum_probs=43.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      ++++|+++||||++|||++++++|++ |++|++++|+ +.+++..+       ...+.+..+|+++.+
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~   61 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-------IEGVEPIESDIVKEV   61 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-------STTEEEEECCHHHHH
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-------hcCCcceecccchHH
Confidence            47899999999999999999999988 9999999999 54443322       123667788888764

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.81  E-value=3.8e-09  Score=79.97  Aligned_cols=36  Identities=25%  Similarity=0.353  Sum_probs=33.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |++|+++||||++|||++++++|+++|++|++++|+
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~   36 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLS   36 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecC
Confidence            367999999999999999999999999999999998

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.80  E-value=1.8e-08  Score=95.76  Aligned_cols=70  Identities=27%  Similarity=0.380  Sum_probs=58.0

Q ss_pred             CCCCCCeEEEeCCCCh-HHHHHHHHHHHCCCEEEEe-ecC-hhHHHHHHHHHHHhC--CceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKG-IGYALAKEFLKAGDNVIIC-SRS-ERVDSAVQSLREEFG--EQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~G-IG~~~a~~La~~Ga~Vvi~-~r~-~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++||+++||||++| ||+++++.|++.|++|+++ +|+ +.+++..+++.++.+  +..+.+..+|++|.+++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV  745 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDV  745 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHH
Confidence            3589999999999998 9999999999999999998 466 677777777765543  34678889999998764

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=98.78  E-value=1.6e-08  Score=76.82  Aligned_cols=52  Identities=37%  Similarity=0.496  Sum_probs=42.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccc
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAA  141 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~  141 (147)
                      +|+++||||++|||++++++|+++|++|++++|+ +.   ..+++    +   +.+..+|+++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~----~---~~~~~~D~~~   54 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL----G---AVPLPTDLEK   54 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH----T---CEEEECCTTT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh----C---cEEEecCCch
Confidence            6899999999999999999999999999999999 43   22222    2   4556778876

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=98.78  E-value=1.1e-08  Score=84.66  Aligned_cols=66  Identities=15%  Similarity=0.059  Sum_probs=50.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHH-CCCEEEEeecC-hhHH-----------HHHH-HHHHHhCCceEEEEeccccchh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRS-ERVD-----------SAVQ-SLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~-~Ga~Vvi~~r~-~~~~-----------~~~~-~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      ..+|+++||||++|||+++++.|++ +|++|++++++ +..+           +..+ ++.+ .+. .+....+|+++.+
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~-~G~-~a~~i~~Dvtd~~  122 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ-KGL-YAKSINGDAFSDE  122 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHH-TTC-CEEEEESCTTSHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHh-cCC-ceEEEECCCCCHH
Confidence            5689999999999999999999999 99999999987 3321           2223 3333 333 4677889999887


Q ss_pred             hh
Q 032098          144 RH  145 (147)
Q Consensus       144 ~~  145 (147)
                      +.
T Consensus       123 ~v  124 (405)
T 3zu3_A          123 IK  124 (405)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=98.78  E-value=7e-09  Score=79.48  Aligned_cols=39  Identities=21%  Similarity=0.192  Sum_probs=33.1

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .....+|+++||||++|||++++++|+++|++|++++|+
T Consensus        17 ~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~   55 (251)
T 3orf_A           17 RGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFR   55 (251)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            344458999999999999999999999999999999987

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.77  E-value=2.8e-08  Score=94.43  Aligned_cols=70  Identities=21%  Similarity=0.309  Sum_probs=57.2

Q ss_pred             CCCCCCeEEEeCCCCh-HHHHHHHHHHHCCCEEEEee-cC-hhHHHHHHHHHHHhC--CceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKG-IGYALAKEFLKAGDNVIICS-RS-ERVDSAVQSLREEFG--EQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~G-IG~~~a~~La~~Ga~Vvi~~-r~-~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++||+++||||++| ||+++|+.|++.|++|++++ |+ +.+++..+++..+.+  +..+.+..+|++|.+++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV  722 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDV  722 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHH
Confidence            3588999999999999 99999999999999999996 54 666677777755543  34678889999998764

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.77  E-value=1.8e-08  Score=77.22  Aligned_cols=41  Identities=34%  Similarity=0.557  Sum_probs=36.5

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecCh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSE  114 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~  114 (147)
                      ....+++|+++||||++|||++++++|+++|++|++++|++
T Consensus        13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~   53 (249)
T 1o5i_A           13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE   53 (249)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            35578999999999999999999999999999999999984

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=98.77  E-value=2.7e-08  Score=84.22  Aligned_cols=64  Identities=25%  Similarity=0.336  Sum_probs=53.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC----hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS----ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~----~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+++||||++|||+++++.|+++|+ +|++++|+    +.+++..+++... + ..+.+..+|++|.++.
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~-g-~~v~~~~~Dvtd~~~v  307 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL-G-VRVTIAACDAADREAL  307 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT-T-CEEEEEECCTTCHHHH
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc-C-CeEEEEEccCCCHHHH
Confidence            58999999999999999999999998 78899986    3456677777553 3 4688899999998764

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.77  E-value=1.5e-08  Score=99.86  Aligned_cols=69  Identities=19%  Similarity=0.252  Sum_probs=53.2

Q ss_pred             CCCCCeEEEeCCCCh-HHHHHHHHHHHCCCEEEEeecC-hh-HHHHHHHHHHHhC--CceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKG-IGYALAKEFLKAGDNVIICSRS-ER-VDSAVQSLREEFG--EQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~G-IG~~~a~~La~~Ga~Vvi~~r~-~~-~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~~  145 (147)
                      .++||+++||||++| ||+++|+.|+++|++|++++|+ +. ..+..+++.++.+  +..+.+..+|+++.+++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v 2206 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDI 2206 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHH
Confidence            489999999999999 9999999999999999999998 44 2222333333322  23577888999988764

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=98.76  E-value=1.8e-08  Score=83.78  Aligned_cols=67  Identities=18%  Similarity=0.184  Sum_probs=51.4

Q ss_pred             CCCCeEEEeCCCChHHHH--HHHHHHHCCCEEEEeecC-hhH-----------HHHHHHHHHHhCCceEEEEeccccchh
Q 032098           78 LPPYNVLITGSTKGIGYA--LAKEFLKAGDNVIICSRS-ERV-----------DSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~--~a~~La~~Ga~Vvi~~r~-~~~-----------~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      ..||+++||||++|||++  ++++|+++|++|++++|+ +..           .+..+++....+ ..+.+..+|+++.+
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~Dvtd~~  136 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKG-LVAKNFIEDAFSNE  136 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTT-CCEEEEESCTTCHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcC-CcEEEEEeeCCCHH
Confidence            689999999999999999  999999999999999997 221           233333334434 35778889999987


Q ss_pred             hh
Q 032098          144 RH  145 (147)
Q Consensus       144 ~~  145 (147)
                      ++
T Consensus       137 ~v  138 (418)
T 4eue_A          137 TK  138 (418)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=98.75  E-value=7.4e-08  Score=75.50  Aligned_cols=67  Identities=13%  Similarity=0.145  Sum_probs=51.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEE-eccccchhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVT-WQHSAALSR  144 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~-~~Dvs~~~~  144 (147)
                      .+++|+++||||+++||..+++.|++.|++|++++|+ +..++..+.+....+ ..+.+. ..|+++.++
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~   76 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP-GRFETAVVEDMLKQGA   76 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHST-TTEEEEECSCTTSTTT
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCC-CceEEEEecCCcChHH
Confidence            4678999999999999999999999999999999999 555554444433322 235666 788887654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.73  E-value=5.2e-08  Score=76.36  Aligned_cols=65  Identities=22%  Similarity=0.340  Sum_probs=51.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      ..++||+++||||++|||++++..|++.|++|++++|+ +++++..+++....+   +.+..+|+++.+
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~---~~~~~~D~~~~~  180 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK---VNVTAAETADDA  180 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHT---CCCEEEECCSHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCC---cEEEEecCCCHH
Confidence            34789999999999999999999999999999999999 777777777755322   234456766554

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=98.69  E-value=2.9e-08  Score=84.45  Aligned_cols=66  Identities=17%  Similarity=0.211  Sum_probs=52.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCE-EEEe-ecC--------------hhHHHHHHHHHHHhCCceEEEEeccccc
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIIC-SRS--------------ERVDSAVQSLREEFGEQHVCVTWQHSAA  141 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~-Vvi~-~r~--------------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~  141 (147)
                      -++|+++||||++|||+++++.|+++|++ |+++ +|+              +.+++..+++.+. + ..+.+..+|++|
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g-~~v~~~~~Dvtd  326 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL-G-ATATVVTCDLTD  326 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH-T-CEEEEEECCTTS
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc-C-CEEEEEECCCCC
Confidence            46899999999999999999999999998 6677 787              2235566677554 3 368889999999


Q ss_pred             hhhh
Q 032098          142 LSRH  145 (147)
Q Consensus       142 ~~~~  145 (147)
                      .++.
T Consensus       327 ~~~v  330 (525)
T 3qp9_A          327 AEAA  330 (525)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.68  E-value=1.6e-08  Score=94.48  Aligned_cols=71  Identities=27%  Similarity=0.377  Sum_probs=56.5

Q ss_pred             CCCCCCCeEEEeCCCCh-HHHHHHHHHHHCCCEEEEe-ecC-hhHHHHHHHHHHHhC--CceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKG-IGYALAKEFLKAGDNVIIC-SRS-ERVDSAVQSLREEFG--EQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~G-IG~~~a~~La~~Ga~Vvi~-~r~-~~~~~~~~~l~~~~~--~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.++||+++||||++| ||+++|+.|+++|++|+++ +|+ +.+++..+++.++.+  +..+.+..+|++|.+++
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esV  546 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDV  546 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHH
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHH
Confidence            34589999999999998 9999999999999999998 565 666666666644432  33678889999988764

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=98.68  E-value=2.7e-08  Score=76.18  Aligned_cols=44  Identities=20%  Similarity=0.191  Sum_probs=37.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      |+++||||++|||+++++.|+++|++|++++|+ +.+++..+ +..
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~   46 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAE   46 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHH
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHh
Confidence            789999999999999999999999999999999 66655443 543

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.64  E-value=2e-08  Score=75.51  Aligned_cols=34  Identities=26%  Similarity=0.402  Sum_probs=32.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +|+++||||++|||++++++|+++|++|++++|+
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~   35 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLR   35 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccC
Confidence            6899999999999999999999999999999887

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=98.64  E-value=1.1e-08  Score=78.83  Aligned_cols=56  Identities=11%  Similarity=0.067  Sum_probs=46.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++|+++||||++|||+++++.|+++|++|++++|+ +...           ...+.+..+|++|.++.
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~   58 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADANAV   58 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHHHH
Confidence            46899999999999999999999999999999998 3221           23467788899887654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=98.64  E-value=1.2e-07  Score=75.78  Aligned_cols=65  Identities=22%  Similarity=0.341  Sum_probs=51.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHC-CC-EEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKA-GD-NVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~-Ga-~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++|+++||||+++||.++++.|++. |+ +|++++|+ +...+..+++    ....+.+...|++|.++.
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~----~~~~v~~~~~Dl~d~~~l   85 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEF----NDPRMRFFIGDVRDLERL   85 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHH----CCTTEEEEECCTTCHHHH
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHh----cCCCEEEEECCCCCHHHH
Confidence            578999999999999999999999999 97 99999999 5444444333    223577888899987653

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=98.62  E-value=3.3e-08  Score=75.21  Aligned_cols=57  Identities=21%  Similarity=0.230  Sum_probs=43.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHH-CCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~-~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++|+++||||++|||++++++|++ .|++|++.+|++..           ....+.+..+|++|.+++
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~-----------~~~~~~~~~~Dv~~~~~v   59 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF-----------SAENLKFIKADLTKQQDI   59 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC-----------CCTTEEEEECCTTCHHHH
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc-----------ccccceEEecCcCCHHHH
Confidence            4678999999999999999999999 78999999887310           112345667777776553

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=98.62  E-value=1.3e-07  Score=80.27  Aligned_cols=66  Identities=26%  Similarity=0.303  Sum_probs=53.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-h---hHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-E---RVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~---~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      -.+|+++||||++|||+.+++.|++.|+ +|++++|+ +   .+++..+++...  +..+.+..+|++|.++.
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v  327 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH--GCEVVHAACDVAERDAL  327 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT--TCEEEEEECCSSCHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHH
Confidence            4678999999999999999999999999 69999998 2   356666666543  34688889999998764

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=98.62  E-value=9.6e-08  Score=80.42  Aligned_cols=66  Identities=26%  Similarity=0.338  Sum_probs=53.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCE-EEEeecC-h---hHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRS-E---RVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~-Vvi~~r~-~---~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      -.+++++||||++|||+.+++.|+++|++ |++++|+ +   .+++..+++... + ..+.+..+|++|.++.
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~-g-~~v~~~~~Dv~d~~~v  294 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL-G-ARTTVAACDVTDRESV  294 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT-T-CEEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc-C-CEEEEEEeCCCCHHHH
Confidence            46789999999999999999999999995 9999998 3   456666677543 3 3578889999998754

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=98.62  E-value=5.4e-08  Score=76.35  Aligned_cols=65  Identities=28%  Similarity=0.194  Sum_probs=46.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |++|+++||||+++||.+++++|+++|++|++++|+ +....  ..+........+.+..+|++|.++
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~   66 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSN   66 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHH
Confidence            357899999999999999999999999999999998 43221  122221112246777889887654

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=98.61  E-value=3.6e-08  Score=75.06  Aligned_cols=44  Identities=14%  Similarity=0.056  Sum_probs=37.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEe-e--cC-hhHHHHHHHH
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIIC-S--RS-ERVDSAVQSL  123 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~-~--r~-~~~~~~~~~l  123 (147)
                      ||+++||||++|||+++++.|+++|++|+++ +  |+ +.+++..+++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~   48 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN   48 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh
Confidence            5899999999999999999999999999999 6  88 6666555444

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=98.60  E-value=9.9e-08  Score=71.10  Aligned_cols=59  Identities=15%  Similarity=0.205  Sum_probs=46.5

Q ss_pred             CeEEEeCCCChHHHHHHHHHH-HCCCEEEEeecC-h-hHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFL-KAGDNVIICSRS-E-RVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La-~~Ga~Vvi~~r~-~-~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |+++||||++|||+++++.|+ +.|++|++++|+ + .+++..    ..  ...+.+..+|++|.++.
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~D~~d~~~~   67 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID--HERVTVIEGSFQNPGXL   67 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT--STTEEEEECCTTCHHHH
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC--CCceEEEECCCCCHHHH
Confidence            789999999999999999999 899999999999 4 333322    12  23467788899887653

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=98.60  E-value=2e-08  Score=79.36  Aligned_cols=65  Identities=15%  Similarity=0.219  Sum_probs=48.6

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +...+++++++||||+++||.+++++|++.|++|++++|+ +...+..+++      ..+.+..+|++|.++
T Consensus        14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l------~~v~~~~~Dl~d~~~   79 (330)
T 2pzm_A           14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV------AGLSVIEGSVTDAGL   79 (330)
T ss_dssp             CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC------TTEEEEECCTTCHHH
T ss_pred             CcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc------CCceEEEeeCCCHHH
Confidence            3556889999999999999999999999999999999997 3222111111      235667788887654

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=98.60  E-value=1.3e-07  Score=84.03  Aligned_cols=66  Identities=23%  Similarity=0.276  Sum_probs=55.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHH-HCCC-EEEEeecC----hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFL-KAGD-NVIICSRS----ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La-~~Ga-~Vvi~~r~----~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      -.+|+++||||++|||+++|+.|+ ++|+ +|++++|+    +.+++..+++.+.  +..+.+..+|++|.++.
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--G~~v~~~~~Dvsd~~~v  599 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY--GAEVSLQACDVADRETL  599 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHH
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc--CCcEEEEEeecCCHHHH
Confidence            468999999999999999999999 7999 59999998    3466777777654  34688999999998765

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=98.55  E-value=7.9e-08  Score=70.63  Aligned_cols=56  Identities=23%  Similarity=0.317  Sum_probs=44.6

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |+++||||++|||++++++|+++  +|++++|+ +.+++..+++    +.   .+..+|++|.++.
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~----~~---~~~~~D~~~~~~~   57 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV----GA---RALPADLADELEA   57 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH----TC---EECCCCTTSHHHH
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc----cC---cEEEeeCCCHHHH
Confidence            58999999999999999999998  99999999 5555554443    22   5677898887653

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=98.55  E-value=3e-08  Score=74.59  Aligned_cols=60  Identities=23%  Similarity=0.256  Sum_probs=46.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC--EEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga--~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +++|+++||||++|||.+++++|+++|+  +|++++|+ +.+++..    .    ..+.+..+|++|.++.
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~----~----~~~~~~~~D~~d~~~~   78 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA----Y----KNVNQEVVDFEKLDDY   78 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG----G----GGCEEEECCGGGGGGG
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc----c----CCceEEecCcCCHHHH
Confidence            5688999999999999999999999999  99999998 4332211    0    1355677888887653

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=98.54  E-value=6.1e-08  Score=73.26  Aligned_cols=60  Identities=12%  Similarity=0.067  Sum_probs=46.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +..|+++||||++|||.++++.|+++| ++|++++|+ +.+++.        ....+.+..+|++|.++.
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--------~~~~~~~~~~Dl~d~~~~   82 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--------YPTNSQIIMGDVLNHAAL   82 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--------CCTTEEEEECCTTCHHHH
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--------ccCCcEEEEecCCCHHHH
Confidence            345799999999999999999999999 899999999 433211        122467778898887653

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=98.51  E-value=1.8e-07  Score=70.18  Aligned_cols=58  Identities=17%  Similarity=0.095  Sum_probs=44.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHC--CCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~--Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +++|+++||||+++||.+++++|++.  |++|++++|+ +.+++    +    + ..+.+..+|++|.++
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~----~----~-~~~~~~~~D~~d~~~   62 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----I----G-GEADVFIGDITDADS   62 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH----T----T-CCTTEEECCTTSHHH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh----c----C-CCeeEEEecCCCHHH
Confidence            35789999999999999999999999  8999999998 43322    1    1 123456778877654

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=98.49  E-value=1.3e-07  Score=73.78  Aligned_cols=38  Identities=26%  Similarity=0.435  Sum_probs=35.4

Q ss_pred             CCCCCCeEEEeCCC--ChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s--~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ++++||+++||||+  +|||++++++|+++|++|++++|+
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~   43 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWV   43 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEH
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeecc
Confidence            45889999999999  999999999999999999999875

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.49  E-value=5.6e-07  Score=74.23  Aligned_cols=67  Identities=19%  Similarity=0.094  Sum_probs=51.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHH-HCCCEEEEeecC-hh------------HHHHHHHHHHHhCCceEEEEeccccch
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFL-KAGDNVIICSRS-ER------------VDSAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La-~~Ga~Vvi~~r~-~~------------~~~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      .+.+|+++|||+++|||++++.+|+ +.|+.|+++++. +.            .....+++++. |. ....+.+|+++.
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~-G~-~a~~i~~Dv~d~  124 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE-GL-YSVTIDGDAFSD  124 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH-TC-CEEEEESCTTSH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc-CC-CceeEeCCCCCH
Confidence            4678999999999999999999998 789999988876 21            22334455444 43 467788999987


Q ss_pred             hhh
Q 032098          143 SRH  145 (147)
Q Consensus       143 ~~~  145 (147)
                      ++.
T Consensus       125 e~i  127 (401)
T 4ggo_A          125 EIK  127 (401)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=98.48  E-value=2.5e-07  Score=73.14  Aligned_cols=68  Identities=21%  Similarity=0.241  Sum_probs=51.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCC---ceEEEEeccccchhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE---QHVCVTWQHSAALSR  144 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~---~~v~~~~~Dvs~~~~  144 (147)
                      ++.+|+++||||+++||..+++.|++.|++|++++|+ ....+....+....+.   ..+.+...|+.|.++
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   93 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTT   93 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHH
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHH
Confidence            4678999999999999999999999999999999997 3333344444332110   247788889988764

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=98.48  E-value=2.2e-08  Score=79.82  Aligned_cols=35  Identities=26%  Similarity=0.352  Sum_probs=31.9

Q ss_pred             CCCeEEEeCCCC--hHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~--GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ++|+++|||+++  |||+++|++|+++|++|++++++
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~   37 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWP   37 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecC
Confidence            479999999986  99999999999999999987766

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=98.44  E-value=4.2e-07  Score=72.06  Aligned_cols=67  Identities=19%  Similarity=0.136  Sum_probs=48.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhC---CceEEEEeccccchhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG---EQHVCVTWQHSAALSR  144 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~---~~~v~~~~~Dvs~~~~  144 (147)
                      +.+++++||||+++||..+++.|++.|++|++++|+ ....+..+++.+...   ...+.+...|+++.++
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   95 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDD   95 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHH
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHH
Confidence            567899999999999999999999999999999997 211122222222111   1246677889988664

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=98.43  E-value=2.6e-07  Score=67.79  Aligned_cols=31  Identities=23%  Similarity=0.437  Sum_probs=29.6

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .++||||++|||++++++|+ +|++|++++|+
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~   35 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRH   35 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESS
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecC
Confidence            69999999999999999999 99999999886

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=98.43  E-value=2.3e-07  Score=73.26  Aligned_cols=38  Identities=26%  Similarity=0.436  Sum_probs=35.2

Q ss_pred             CCCCCCeEEEeCC--CChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~--s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +.++||+++||||  ++|||+++++.|+++|++|++++|+
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWP   44 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECH
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecc
Confidence            3478999999999  8999999999999999999999875

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=98.43  E-value=1.9e-07  Score=73.70  Aligned_cols=42  Identities=19%  Similarity=0.124  Sum_probs=31.3

Q ss_pred             CCCCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           72 VKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        72 ~~~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..++..+++|+++||||+++||..+++.|++.|++|++++|+
T Consensus        11 ~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~   52 (347)
T 4id9_A           11 SSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLR   52 (347)
T ss_dssp             ----------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCC
Confidence            334556889999999999999999999999999999999997

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=98.42  E-value=2.6e-07  Score=72.98  Aligned_cols=37  Identities=24%  Similarity=0.445  Sum_probs=34.4

Q ss_pred             CCCCCeEEEeCC--CChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~--s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .++||+++||||  ++|||+++++.|+++|++|++++|+
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWP   44 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEecc
Confidence            478999999999  8999999999999999999999863

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=98.42  E-value=1.1e-06  Score=73.39  Aligned_cols=67  Identities=25%  Similarity=0.303  Sum_probs=50.5

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHC---CCEEEEeecChhHHHHHHHHHHHhCC--------------ceEEEEecc
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKA---GDNVIICSRSERVDSAVQSLREEFGE--------------QHVCVTWQH  138 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~---Ga~Vvi~~r~~~~~~~~~~l~~~~~~--------------~~v~~~~~D  138 (147)
                      ...++|+++||||+++||..++++|++.   |++|++++|++...+..+.+.+....              ..+.+...|
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            4567899999999999999999999999   99999999983333333333332222              357888889


Q ss_pred             ccch
Q 032098          139 SAAL  142 (147)
Q Consensus       139 vs~~  142 (147)
                      +++.
T Consensus       149 l~~~  152 (478)
T 4dqv_A          149 KSEP  152 (478)
T ss_dssp             TTSG
T ss_pred             CCCc
Confidence            9844

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=98.42  E-value=2.9e-07  Score=72.48  Aligned_cols=66  Identities=23%  Similarity=0.179  Sum_probs=45.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhC-CceEEEEeccccchhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG-EQHVCVTWQHSAALSR  144 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~  144 (147)
                      +++|+++||||+++||..++++|+++|++|++++|+ +..++. ..+..... ...+.+...|++|.++
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~   70 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKV-KHLLDLPKAETHLTLWKADLADEGS   70 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHH-HHHHTSTTHHHHEEEEECCTTSTTT
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHH-HHHHhcccCCCeEEEEEcCCCCHHH
Confidence            467899999999999999999999999999998888 433222 12211000 1236677788887654

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=98.42  E-value=2.1e-07  Score=67.85  Aligned_cols=57  Identities=21%  Similarity=0.246  Sum_probs=43.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +++++||||+++||..++++|++.|++|++++|+ +.+.+.        ....+.+..+|++|.++
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~   60 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAAD   60 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc--------cCCceEEEEecCCCHHH
Confidence            3789999999999999999999999999999998 432110        01235667788887654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=98.40  E-value=5.4e-07  Score=71.03  Aligned_cols=64  Identities=20%  Similarity=0.203  Sum_probs=47.4

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hh------HHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ER------VDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~------~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +|+++||||+++||..++++|++.|++|++++|+ ..      ..+..+++....+. .+.+..+|+++.++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~   72 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGR-SVEFEEMDILDQGA   72 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTC-CCEEEECCTTCHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCC-ceEEEECCCCCHHH
Confidence            4789999999999999999999999999999886 22      22334444332222 35677789888654

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=98.40  E-value=4.5e-07  Score=74.09  Aligned_cols=69  Identities=17%  Similarity=0.149  Sum_probs=48.3

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-h---hHHHHHHHHHHHh-------CCceEEEEeccccchhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-E---RVDSAVQSLREEF-------GEQHVCVTWQHSAALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~---~~~~~~~~l~~~~-------~~~~v~~~~~Dvs~~~~  144 (147)
                      ....+|+++||||+++||..++++|++.|++|++++|+ +   ..++..+.+...+       ....+.+...|+++.++
T Consensus        65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  144 (427)
T 4f6c_A           65 SHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  144 (427)
T ss_dssp             CCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred             CCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence            34667899999999999999999999999999999999 3   3333333332221       11347778889988543

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=98.39  E-value=1.5e-07  Score=74.36  Aligned_cols=64  Identities=19%  Similarity=0.125  Sum_probs=44.3

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      ...+++++++||||+++||..++++|++.|++|++++|+ +...+...++      ..+.+..+|++|.++
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~------~~~~~~~~Dl~d~~~   80 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH------PNLTFVEGSIADHAL   80 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCC------TTEEEEECCTTCHHH
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhc------CCceEEEEeCCCHHH
Confidence            345678899999999999999999999999999999997 3211111110      235667788887654

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=98.39  E-value=2.2e-07  Score=73.70  Aligned_cols=64  Identities=19%  Similarity=0.063  Sum_probs=48.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +++++++||||+++||..++++|++.|++|++++|+ +...+..+.+. .  ...+.+...|+++.++
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~--~~~~~~~~~Dl~d~~~   71 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-V--ADGMQSEIGDIRDQNK   71 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-T--TTTSEEEECCTTCHHH
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-c--CCceEEEEccccCHHH
Confidence            567899999999999999999999999999999998 43333333221 1  1235667788887654

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.38  E-value=1.3e-06  Score=67.02  Aligned_cols=37  Identities=30%  Similarity=0.478  Sum_probs=34.0

Q ss_pred             CCCCCeEEEeCC----------------CChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~----------------s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +|.||+++||||                ++|||+++|++|+++|++|++++++
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~   57 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGP   57 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence            578999999999                6899999999999999999998764

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=98.38  E-value=6.1e-07  Score=66.13  Aligned_cols=53  Identities=17%  Similarity=0.251  Sum_probs=42.4

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      .++||||+++||..++++|+++|++|++++|+ +.+++    +.     ..+.+...|++|.+
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----~~-----~~~~~~~~D~~d~~   55 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ----TH-----KDINILQKDIFDLT   55 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH----HC-----SSSEEEECCGGGCC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh----cc-----CCCeEEeccccChh
Confidence            58999999999999999999999999999999 44332    21     23567778888764

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=98.35  E-value=1e-06  Score=65.20  Aligned_cols=55  Identities=18%  Similarity=0.282  Sum_probs=43.0

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .++||||+++||..++++|+++|++|++++|+ +.+.+    +.    ...+.+...|++|.++
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----~~----~~~~~~~~~D~~d~~~   57 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAAD----RL----GATVATLVKEPLVLTE   57 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HT----CTTSEEEECCGGGCCH
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccc----cc----CCCceEEecccccccH
Confidence            48999999999999999999999999999999 43332    21    1235677788887653

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=98.34  E-value=5.7e-07  Score=68.32  Aligned_cols=33  Identities=27%  Similarity=0.378  Sum_probs=32.0

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |+++||||++|||+++++.|+++|++|++++|+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~   34 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIR   34 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            689999999999999999999999999999997

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=98.34  E-value=1.6e-06  Score=68.11  Aligned_cols=61  Identities=18%  Similarity=0.152  Sum_probs=46.0

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |+++||||+++||..++++|++.|++|++++|+  ....+..+++...   ..+.+...|+++.++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~Dl~d~~~   64 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL---GNFEFVHGDIRNKND   64 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT---CCCEEEECCTTCHHH
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC---CceEEEEcCCCCHHH
Confidence            579999999999999999999999999999985  3333334444321   235667789887654

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.34  E-value=1.1e-06  Score=85.96  Aligned_cols=66  Identities=29%  Similarity=0.417  Sum_probs=52.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCE-EEEeecC-hhH---HHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRS-ERV---DSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~-Vvi~~r~-~~~---~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      -.+|+++||||++|||+++|+.|+++|++ |++++|+ +..   .+..+++... + ..+.+..+|++|.+++
T Consensus      1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-g-~~v~~~~~Dvsd~~~v 1952 (2512)
T 2vz8_A         1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ-G-VQVLVSTSNASSLDGA 1952 (2512)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT-T-CEEEEECCCSSSHHHH
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC-C-CEEEEEecCCCCHHHH
Confidence            37899999999999999999999999997 8888888 333   3445555433 3 3678889999998764

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=98.33  E-value=7.2e-07  Score=70.23  Aligned_cols=61  Identities=13%  Similarity=0.138  Sum_probs=47.0

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCC-------CEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAG-------DNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~G-------a~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      ..+++++++||||+++||..++++|++.|       ++|++++|+ +...+       . ....+.+..+|+++.++
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------~-~~~~~~~~~~Dl~d~~~   78 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------G-FSGAVDARAADLSAPGE   78 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------T-CCSEEEEEECCTTSTTH
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------c-cCCceeEEEcCCCCHHH
Confidence            35788899999999999999999999999       899999998 32211       1 12346677788887654

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=98.33  E-value=2.3e-07  Score=73.95  Aligned_cols=69  Identities=16%  Similarity=0.064  Sum_probs=47.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHH--CCCEEEEeecC-hhHH---HHH---HHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLK--AGDNVIICSRS-ERVD---SAV---QSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~--~Ga~Vvi~~r~-~~~~---~~~---~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.+++|+++||||+++||..++++|++  .|++|++++|+ ....   +..   ...... ....+.+..+|+++.++.
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~   83 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNL-IGFKGEVIAADINNPLDL   83 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGG-TTCCSEEEECCTTCHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhc-cccCceEEECCCCCHHHH
Confidence            457899999999999999999999999  99999999997 3110   000   011111 122356778888887643

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=98.32  E-value=8.8e-07  Score=70.42  Aligned_cols=65  Identities=22%  Similarity=0.182  Sum_probs=42.2

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhH-HHHHHHHHHHh--CCceEEEEeccccchhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERV-DSAVQSLREEF--GEQHVCVTWQHSAALSR  144 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~-~~~~~~l~~~~--~~~~v~~~~~Dvs~~~~  144 (147)
                      +|+++||||+++||.+++++|+++|++|++++|+ +.. .+..+++....  ....+.+..+|+++.++
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   69 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSN   69 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHH
Confidence            4789999999999999999999999999999998 321 12222222111  01246777889988754

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=98.31  E-value=4.2e-07  Score=67.64  Aligned_cols=55  Identities=24%  Similarity=0.356  Sum_probs=44.2

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      ++++||||+++||..+++.|++.|++|++++|+ +.+.+.         ...+.+..+|++|.++
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~Dl~d~~~   60 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---------NEHLKVKKADVSSLDE   60 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC---------CTTEEEECCCTTCHHH
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc---------cCceEEEEecCCCHHH
Confidence            689999999999999999999999999999998 432211         1346777888887664

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=98.30  E-value=3.5e-07  Score=71.26  Aligned_cols=63  Identities=21%  Similarity=0.181  Sum_probs=43.4

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeec-C-hhHHH--HHHHHHHHhCCceEEEEeccccchhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-S-ERVDS--AVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r-~-~~~~~--~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      ||+++||||+++||..++++|+++|++|++++| + +...+  ...++...  ...+.+..+|++|.++
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~   67 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGA--SEKLHFFNADLSNPDS   67 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTH--HHHEEECCCCTTCGGG
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhcc--CCceEEEecCCCCHHH
Confidence            689999999999999999999999999999888 5 22111  11111100  1235667788887654

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=98.29  E-value=5.3e-07  Score=67.02  Aligned_cols=53  Identities=21%  Similarity=0.234  Sum_probs=43.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccc-hhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAA-LSR  144 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~-~~~  144 (147)
                      .++||||+++||..++++|++.|++|++++|+ +.+++.          ..+.+..+|++| .++
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----------~~~~~~~~D~~d~~~~   56 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY----------NNVKAVHFDVDWTPEE   56 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC----------TTEEEEECCTTSCHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc----------CCceEEEecccCCHHH
Confidence            58999999999999999999999999999999 432211          246778889888 554

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=98.28  E-value=1.2e-06  Score=75.98  Aligned_cols=68  Identities=16%  Similarity=0.134  Sum_probs=46.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +.+++|+++||||+++||.+++++|++.|++|++++|+ ....+..+++....+ ..+.+..+|+++.++
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~v~~v~~Dl~d~~~   75 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK-HHIPFYEVDLCDRKG   75 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHT-SCCCEEECCTTCHHH
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccC-CceEEEEcCCCCHHH
Confidence            45678999999999999999999999999999999987 322222333322212 235566788887654

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=98.28  E-value=9.9e-07  Score=69.34  Aligned_cols=62  Identities=16%  Similarity=0.115  Sum_probs=45.0

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH--HHHHHHHHhCCceEEEEeccccchhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS--AVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~--~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +|+++||||+++||..++++|+++|++|+++.|+ +...+  ...++. .  ...+.+...|+++.++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~Dl~d~~~   73 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-E--LGDLKIFRADLTDELS   73 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-G--GSCEEEEECCTTTSSS
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-C--CCcEEEEecCCCChHH
Confidence            6899999999999999999999999999998887 32211  112232 1  1236667788887643

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=98.25  E-value=3.3e-06  Score=67.73  Aligned_cols=64  Identities=16%  Similarity=0.223  Sum_probs=46.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHH-HCCCEEEEeecC-hh---------HHHHHHHHHHHhCC---ce---EEEEeccccchh
Q 032098           81 YNVLITGSTKGIGYALAKEFL-KAGDNVIICSRS-ER---------VDSAVQSLREEFGE---QH---VCVTWQHSAALS  143 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La-~~Ga~Vvi~~r~-~~---------~~~~~~~l~~~~~~---~~---v~~~~~Dvs~~~  143 (147)
                      ++++||||+++||..+++.|+ +.|++|++++|+ ..         .+...+.+....+.   ..   +.+..+|+++.+
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   82 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence            479999999999999999999 999999999987 33         33332223222111   12   667788998876


Q ss_pred             h
Q 032098          144 R  144 (147)
Q Consensus       144 ~  144 (147)
                      .
T Consensus        83 ~   83 (397)
T 1gy8_A           83 F   83 (397)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=98.25  E-value=1.9e-06  Score=66.72  Aligned_cols=61  Identities=18%  Similarity=0.185  Sum_probs=45.1

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecCh-------hHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSE-------RVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~-------~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +++++||||+++||..++++|++.|++|++++|+.       ...+..+++..  .  .+.+...|++|.++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~--~--~v~~v~~D~~d~~~   69 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQS--L--GVILLEGDINDHET   69 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHH--T--TCEEEECCTTCHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHh--C--CCEEEEeCCCCHHH
Confidence            46799999999999999999999999999999974       22222233322  1  25567788888754

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=98.24  E-value=2.5e-07  Score=72.98  Aligned_cols=69  Identities=12%  Similarity=0.034  Sum_probs=43.8

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCC--CEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      ++++.+++++||||+++||..++++|++.|  .+|++.+|.... .....+........+.+..+|++|.+.
T Consensus        19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~Dl~d~~~   89 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYS-GNLNNVKSIQDHPNYYFVKGEIQNGEL   89 (346)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTT-CCGGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred             ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccc-cchhhhhhhccCCCeEEEEcCCCCHHH
Confidence            445788999999999999999999999999  677777775100 001111111122346777888887654

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=98.22  E-value=2.3e-06  Score=67.18  Aligned_cols=62  Identities=23%  Similarity=0.251  Sum_probs=43.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +++||||+++||.+++++|+++|++|+++++. ....+..+++....+ ..+.+...|+++.++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~   64 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG-KHPTFVEGDIRNEAL   64 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHT-SCCEEEECCTTCHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcC-CcceEEEccCCCHHH
Confidence            68999999999999999999999999999875 211122233332222 235566788887654

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.20  E-value=2e-06  Score=67.39  Aligned_cols=64  Identities=22%  Similarity=0.055  Sum_probs=45.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhH-HHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERV-DSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~-~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      -.++.++||||+++||..+++.|++.|++|++++|+ +.. .+..+.+.   ....+.+...|+++.++
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~   77 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG---IEGDIQYEDGDMADACS   77 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT---CGGGEEEEECCTTCHHH
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc---ccCceEEEECCCCCHHH
Confidence            457789999999999999999999999999999998 321 11122221   12346677888887654

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.20  E-value=1.5e-06  Score=63.78  Aligned_cols=55  Identities=25%  Similarity=0.224  Sum_probs=43.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCC--EEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga--~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++++||||+++||.++++.|+++|+  +|++++|+ +.          .  ...+.+..+|+.+.++.
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~--~~~~~~~~~D~~~~~~~   61 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPRLDNPVGPLAELLPQ   61 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTTEECCBSCHHHHGGG
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------c--CCCceEEeccccCHHHH
Confidence            367899999999999999999999998  99999998 32          0  12355667787776543

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=98.19  E-value=1.9e-06  Score=64.75  Aligned_cols=33  Identities=42%  Similarity=0.546  Sum_probs=31.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |+++||||++|||.+++++|+++|++|++++|+
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~   34 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRG   34 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence            689999999999999999999999999999987

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=98.17  E-value=1.9e-06  Score=68.64  Aligned_cols=62  Identities=19%  Similarity=0.159  Sum_probs=45.3

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHC-CCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEecccc-chhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSA-ALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~-Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs-~~~~  144 (147)
                      ..+.+++++||||++.||..++++|++. |++|++++|+ +.+.+..    .   ...+.+...|++ +.+.
T Consensus        20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----~---~~~v~~~~~Dl~~d~~~   84 (372)
T 3slg_A           20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV----K---HERMHFFEGDITINKEW   84 (372)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG----G---STTEEEEECCTTTCHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc----c---CCCeEEEeCccCCCHHH
Confidence            3466789999999999999999999998 9999999998 4332211    1   124667778887 5543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=98.16  E-value=5e-06  Score=65.85  Aligned_cols=63  Identities=22%  Similarity=0.229  Sum_probs=44.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecCh----hHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSE----RVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~----~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +..++++||||++.||..+++.|++.|++|++++|+.    ...+..+++..    ..+.+...|++|.++
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~----~~v~~~~~Dl~d~~~   74 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALED----KGAIIVYGLINEQEA   74 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHH----TTCEEEECCTTCHHH
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHh----CCcEEEEeecCCHHH
Confidence            3457899999999999999999999999999999973    11222233322    235677788887654

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=98.15  E-value=4.8e-06  Score=65.02  Aligned_cols=61  Identities=16%  Similarity=0.131  Sum_probs=44.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecCh------hHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSE------RVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~------~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +++++||||+++||..++++|++.|++|++++|+.      ...+..+++..  .  .+.+..+|++|.++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~--~--~v~~v~~D~~d~~~   70 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS--M--GVTIIEGEMEEHEK   70 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH--T--TCEEEECCTTCHHH
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc--C--CcEEEEecCCCHHH
Confidence            35799999999999999999999999999999974      12222223322  1  25667788888664

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=98.15  E-value=2.3e-06  Score=66.60  Aligned_cols=36  Identities=28%  Similarity=0.259  Sum_probs=32.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+.++++||||+++||..++++|+++|++|++++|+
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~   45 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRN   45 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecC
Confidence            356799999999999999999999999999999998

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=98.15  E-value=1.5e-06  Score=69.80  Aligned_cols=62  Identities=18%  Similarity=0.204  Sum_probs=46.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .+++++++||||+++||..++++|++.| ++|++++|+ +...+   .+.   ....+.+...|+++.++
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~---~~~~v~~~~~Dl~d~~~   92 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP---DHPAVRFSETSITDDAL   92 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC---CCTTEEEECSCTTCHHH
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc---CCCceEEEECCCCCHHH
Confidence            4678899999999999999999999999 999999998 32111   110   12346677788887654

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=98.15  E-value=3.2e-06  Score=66.04  Aligned_cols=60  Identities=18%  Similarity=0.230  Sum_probs=44.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |+++||||+++||..++++|++.|++|++++|+ +...+..+++...    .+.+...|++|.++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~----~v~~v~~Dl~d~~~   72 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSL----GAIIVKGELDEHEK   72 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHT----TCEEEECCTTCHHH
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcC----CCEEEEecCCCHHH
Confidence            579999999999999999999999999999998 3222223333221    24567788887654

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.15  E-value=8.6e-06  Score=62.73  Aligned_cols=57  Identities=18%  Similarity=0.338  Sum_probs=42.8

Q ss_pred             CCCeEEEeCC----------------CChHHHHHHHHHHHCCCEEEEeecC-h---------------hHHHHHHHHHHH
Q 032098           79 PPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRS-E---------------RVDSAVQSLREE  126 (147)
Q Consensus        79 ~gkv~vVTG~----------------s~GIG~~~a~~La~~Ga~Vvi~~r~-~---------------~~~~~~~~l~~~  126 (147)
                      .||+++||||                ++++|+++|++++.+|++|++++++ .               ..++..+.+.+.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~~~~~~~~~v~s~~em~~~v~~~   81 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEPHPNLSIREITNTKDLLIEMQER   81 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCCCTTEEEEECCSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCCCeEEEEHhHHHHHHHHHHHh
Confidence            5899999999                7789999999999999999999886 1               145555666555


Q ss_pred             hCCceEEEE
Q 032098          127 FGEQHVCVT  135 (147)
Q Consensus       127 ~~~~~v~~~  135 (147)
                      ++...+.+.
T Consensus        82 ~~~~Dili~   90 (232)
T 2gk4_A           82 VQDYQVLIH   90 (232)
T ss_dssp             GGGCSEEEE
T ss_pred             cCCCCEEEE
Confidence            554444444

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=98.14  E-value=2.2e-06  Score=68.64  Aligned_cols=63  Identities=19%  Similarity=0.115  Sum_probs=43.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hh-----HHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ER-----VDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~-----~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |+++||||+++||..+++.|++.|++|++++|+ +.     +++...++... +...+.+..+|+++.++
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~   97 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV-NKALMKLHYADLTDASS   97 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc-cccceEEEECCCCCHHH
Confidence            789999999999999999999999999999998 32     22222222111 11146677788887654

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=98.13  E-value=5.9e-06  Score=63.96  Aligned_cols=59  Identities=20%  Similarity=0.227  Sum_probs=44.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .|+++||||+++||..++++|++.| ++|++++|+ +...  .+++...    .+.+...|++|.++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~--~~~l~~~----~~~~~~~D~~d~~~   65 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKA--AKELRLQ----GAEVVQGDQDDQVI   65 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHH--HHHHHHT----TCEEEECCTTCHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHH--HHHHHHC----CCEEEEecCCCHHH
Confidence            5789999999999999999999999 999999998 4332  1223221    24566778887654

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=98.12  E-value=3.7e-06  Score=65.09  Aligned_cols=64  Identities=19%  Similarity=0.167  Sum_probs=44.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhH--HHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERV--DSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~--~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .+.++||||+++||..++++|++.|++|++++|+ ...  .+..+.+.... ...+.+...|++|.++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d~~~   70 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHAS   70 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH-hCCCEEEEeccCCHHH
Confidence            4679999999999999999999999999999998 221  11122221111 1235667788887654

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=98.12  E-value=1.2e-05  Score=64.49  Aligned_cols=66  Identities=15%  Similarity=0.136  Sum_probs=45.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH----------------HHHHHHHHHhCCceEEEEecccc
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD----------------SAVQSLREEFGEQHVCVTWQHSA  140 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~----------------~~~~~l~~~~~~~~v~~~~~Dvs  140 (147)
                      ..+..++||||++.||..++++|+++|++|++++|. ....                +...++....+ ..+.+..+|++
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~v~~~~~Dl~   87 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTG-KSIELYVGDIC   87 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHC-CCCEEEESCTT
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccC-CceEEEECCCC
Confidence            467799999999999999999999999999999987 2211                12222222222 24667788998


Q ss_pred             chhh
Q 032098          141 ALSR  144 (147)
Q Consensus       141 ~~~~  144 (147)
                      +.++
T Consensus        88 d~~~   91 (404)
T 1i24_A           88 DFEF   91 (404)
T ss_dssp             SHHH
T ss_pred             CHHH
Confidence            8754

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=98.12  E-value=5.8e-06  Score=64.10  Aligned_cols=61  Identities=18%  Similarity=0.165  Sum_probs=44.6

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hh--HH--HHHHHHHHHhCCceEEEEeccccchhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ER--VD--SAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~--~~--~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .+.++||||+++||..++++|++.|++|++++|+ ..  .+  +..+++.   . ..+.+...|++|.++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~---~-~~~~~~~~D~~d~~~   69 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK---Q-LGAKLIEASLDDHQR   69 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH---T-TTCEEECCCSSCHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHH---h-CCeEEEeCCCCCHHH
Confidence            4679999999999999999999999999999998 21  11  1222221   1 235667788888654

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=98.08  E-value=3.5e-06  Score=67.69  Aligned_cols=36  Identities=22%  Similarity=0.252  Sum_probs=33.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+++++||||+++||..++++|++.|++|++++|+
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   62 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWK   62 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECC
Confidence            356799999999999999999999999999999998

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=98.07  E-value=1.9e-06  Score=68.80  Aligned_cols=63  Identities=21%  Similarity=0.155  Sum_probs=43.5

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hh-----HHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ER-----VDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~-----~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |+++||||+++||..++++|++.|++|++++|+ +.     +++..+++... ....+.+..+|++|.++
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~~   93 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDSTC   93 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc-cCCCceEEEccCCCHHH
Confidence            689999999999999999999999999999998 32     22111111100 11246677889887654

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=98.07  E-value=3.2e-06  Score=66.68  Aligned_cols=38  Identities=21%  Similarity=0.293  Sum_probs=32.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .++++++++||||+++||..++++|++.|++|++++|+
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   60 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNF   60 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            45678999999999999999999999999999999986

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=98.06  E-value=1.2e-05  Score=64.38  Aligned_cols=61  Identities=15%  Similarity=0.119  Sum_probs=45.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEecc-ccchhh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQH-SAALSR  144 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~D-vs~~~~  144 (147)
                      .+++++||||+++||..+++.|++.|++|++++|+ +...  .+++...   ..+.+...| ++|.++
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~~---~~v~~v~~D~l~d~~~   66 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQAI---PNVTLFQGPLLNNVPL   66 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHTS---TTEEEEESCCTTCHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhhc---CCcEEEECCccCCHHH
Confidence            46789999999999999999999999999999998 4331  1233221   135667788 887654

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=98.05  E-value=2.6e-06  Score=66.05  Aligned_cols=55  Identities=16%  Similarity=0.234  Sum_probs=41.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      ++++||||+++||..++++|+++|++|++++|+ +...+..        ...+.+...|+.+.+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dl~d~~   56 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--------NPSAELHVRDLKDYS   56 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--------CTTSEEECCCTTSTT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--------CCCceEEECccccHH
Confidence            469999999999999999999999999999997 3221111        123556677887754

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=98.05  E-value=2.4e-06  Score=66.99  Aligned_cols=61  Identities=16%  Similarity=0.166  Sum_probs=43.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCC--CEEEEeecCh---hHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSE---RVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~~---~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +++++||||+++||..++++|++.|  ++|++++|..   ..+. .+++.   ....+.+..+|++|.++
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~-~~~~~---~~~~~~~~~~Dl~d~~~   68 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPAN-LKDLE---DDPRYTFVKGDVADYEL   68 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG-GTTTT---TCTTEEEEECCTTCHHH
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhH-Hhhhc---cCCceEEEEcCCCCHHH
Confidence            4579999999999999999999987  8999999862   1111 11121   12346777889888754

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.01  E-value=1e-05  Score=63.40  Aligned_cols=47  Identities=30%  Similarity=0.488  Sum_probs=41.6

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      ++++|+++|||++ |+|++++..|++.| +|++++|+ +++++..+++..
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~  172 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE  172 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhh
Confidence            5789999999997 99999999999999 99999999 777777776654

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=97.99  E-value=7.7e-06  Score=64.09  Aligned_cols=55  Identities=15%  Similarity=0.182  Sum_probs=42.2

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +++||||+++||..++++|++.|++|++++|+ +..++    +..    ..+.+...|++|.++
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~~----~~~~~~~~Dl~d~~~   70 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LAY----LEPECRVAEMLDHAG   70 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GGG----GCCEEEECCTTCHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hcc----CCeEEEEecCCCHHH
Confidence            79999999999999999999999999999998 43221    111    134566778877654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=97.97  E-value=6.1e-06  Score=63.23  Aligned_cols=56  Identities=21%  Similarity=0.366  Sum_probs=42.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHC--CCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKA--GDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~--Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |.++||||+++||..++++|++.  |++|++++|+ +...+    +...    .+.+...|++|.++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~----l~~~----~~~~~~~D~~d~~~   59 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST----LADQ----GVEVRHGDYNQPES   59 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH----HHHT----TCEEEECCTTCHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH----Hhhc----CCeEEEeccCCHHH
Confidence            46899999999999999999999  9999999998 44332    2111    24566778887654

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.97  E-value=2.7e-05  Score=51.76  Aligned_cols=37  Identities=16%  Similarity=0.325  Sum_probs=32.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC-hhHH
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-ERVD  117 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~-~~~~  117 (147)
                      ++.++|+|+ ++||..+++.|.+.| ++|++++|+ +.++
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~   43 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALA   43 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHH
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHH
Confidence            468999999 999999999999999 899999999 4444

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=97.94  E-value=4.4e-06  Score=65.75  Aligned_cols=60  Identities=13%  Similarity=0.144  Sum_probs=43.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHC--CCEEEEeecCh-h-HHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSE-R-VDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~--Ga~Vvi~~r~~-~-~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |+++||||+++||..++++|++.  |++|++++|+. . ..+..+++    ....+.+...|++|.++
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~   68 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI----LGDRVELVVGDIADAEL   68 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG----CSSSEEEEECCTTCHHH
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh----ccCCeEEEECCCCCHHH
Confidence            68999999999999999999998  89999999862 1 11111111    12346777888887654

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=97.91  E-value=1.3e-05  Score=62.51  Aligned_cols=33  Identities=24%  Similarity=0.404  Sum_probs=31.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ++++||||+++||..++++|++.|++|++++|+
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNL   34 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence            579999999999999999999999999999987

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.90  E-value=2.4e-05  Score=60.79  Aligned_cols=46  Identities=20%  Similarity=0.353  Sum_probs=40.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSL  123 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l  123 (147)
                      .+++|+++|+|+ +|+|++++..|++.|++|++++|+ +++++..+++
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~  162 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLF  162 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHT
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHh
Confidence            478999999998 699999999999999999999999 7776666555

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=97.88  E-value=1.6e-05  Score=62.17  Aligned_cols=55  Identities=18%  Similarity=0.144  Sum_probs=41.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHC-CCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccch
Q 032098           81 YNVLITGSTKGIGYALAKEFLKA-GDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~-Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      +.++||||+++||..++++|++. |++|++++|+ +..++.    .   ....+.+...|+++.
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~----~---~~~~~~~~~~D~~~~   57 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----L---NHPHFHFVEGDISIH   57 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG----T---TCTTEEEEECCTTTC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHh----h---cCCCeEEEeccccCc
Confidence            36999999999999999999998 8999999998 433221    1   122466777888763

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=97.87  E-value=1.8e-06  Score=65.96  Aligned_cols=53  Identities=17%  Similarity=0.176  Sum_probs=41.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |+++|||++++||..++++|++.|++|++++|+ +...          . ..+.+..+|+++.++
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------~-~~~~~~~~Dl~d~~~   56 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA----------E-AHEEIVACDLADAQA   56 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC----------C-TTEEECCCCTTCHHH
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc----------C-CCccEEEccCCCHHH
Confidence            689999999999999999999999999999998 3210          0 124566677776654

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=97.87  E-value=5.4e-06  Score=64.44  Aligned_cols=32  Identities=28%  Similarity=0.425  Sum_probs=30.4

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +++||||+++||.+++++|+++|++|++++|.
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~   33 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNL   33 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCC
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            58999999999999999999999999999885

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.86  E-value=1.9e-05  Score=57.79  Aligned_cols=35  Identities=29%  Similarity=0.344  Sum_probs=33.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .|++++|||+++|||..+++.+...|++|++++++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~   72 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGS   72 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCC
Confidence            57899999999999999999999999999999998

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=97.86  E-value=2.9e-05  Score=60.36  Aligned_cols=34  Identities=26%  Similarity=0.418  Sum_probs=32.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +++++||||++.||..++++|++.|++|++++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   35 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRS   35 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence            3689999999999999999999999999999998

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.85  E-value=8.3e-05  Score=58.52  Aligned_cols=51  Identities=18%  Similarity=0.312  Sum_probs=44.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHHHHHHhC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQSLREEFG  128 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~l~~~~~  128 (147)
                      .+++|+++|+|+ +|+|++++..|++.|+ +|++++|+ +++++..+++....+
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~  176 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVG  176 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcC
Confidence            578999999998 7999999999999998 79999999 888888888766543

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=97.84  E-value=1.7e-05  Score=61.55  Aligned_cols=34  Identities=32%  Similarity=0.426  Sum_probs=30.7

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +|+++||||+++||..++++|+++|++|++++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   35 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFR   35 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccC
Confidence            5789999999999999999999999999999976

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=97.83  E-value=1.2e-05  Score=61.34  Aligned_cols=55  Identities=16%  Similarity=0.297  Sum_probs=41.8

Q ss_pred             eEEEeCCCChHHHHHHHHHHHC--CCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKA--GDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~--Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .++||||+++||..++++|++.  |++|++++|+ +..++    +...    .+.+...|++|.++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~----~~~~----~~~~~~~D~~d~~~   58 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA----LAAQ----GITVRQADYGDEAA   58 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH----HHHT----TCEEEECCTTCHHH
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh----hhcC----CCeEEEcCCCCHHH
Confidence            3799999999999999999998  9999999998 43332    2111    24566778887654

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.83  E-value=3.4e-05  Score=65.21  Aligned_cols=42  Identities=19%  Similarity=0.222  Sum_probs=37.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      .++.||+++|||++ |||+++|+.|...|++|++++++ +.+.+
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~  303 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQ  303 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence            45899999999997 99999999999999999999998 44443

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=97.83  E-value=2e-05  Score=61.00  Aligned_cols=36  Identities=28%  Similarity=0.380  Sum_probs=32.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +.+++++||||+++||..++++|++.|++|++++|+
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   40 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDL   40 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecC
Confidence            457899999999999999999999999999999987

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=97.81  E-value=3.1e-05  Score=59.44  Aligned_cols=53  Identities=21%  Similarity=0.251  Sum_probs=41.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      ++++++||| ++.||..+++.|++.|++|++++|+ +.+            ...+.+...|+.|.+.
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~   55 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDT   55 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGG
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHH
Confidence            356899999 5999999999999999999999998 331            1234566778777654

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=97.80  E-value=1.9e-05  Score=62.53  Aligned_cols=37  Identities=16%  Similarity=0.327  Sum_probs=31.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~  113 (147)
                      .+++++++||||+++||..++++|++.| ++|++++|+
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~   80 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNL   80 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecC
Confidence            4678899999999999999999999999 999999987

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.80  E-value=9.4e-05  Score=59.19  Aligned_cols=52  Identities=15%  Similarity=0.217  Sum_probs=41.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC----hhHHHHHHHHHHHhC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS----ERVDSAVQSLREEFG  128 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~----~~~~~~~~~l~~~~~  128 (147)
                      ..++||+++|+|+ +|+|++++..|++.|+ +|++++|+    ++++++.+++....+
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~  206 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD  206 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC
Confidence            4578999999998 6999999999999998 89999998    345555566655433

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=97.80  E-value=2.3e-05  Score=65.43  Aligned_cols=66  Identities=17%  Similarity=0.144  Sum_probs=48.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-h---hHHHHHHHHHHH-------hCCceEEEEeccccchhh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-E---RVDSAVQSLREE-------FGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~---~~~~~~~~l~~~-------~~~~~v~~~~~Dvs~~~~  144 (147)
                      ..++++||||++.||..+++.|...|++|++++|+ .   ..++..+.+...       .....+.+...|+++.+.
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  225 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  225 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSS
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCccccc
Confidence            45799999999999999999999999999999998 3   223333333221       112357788889988543

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.77  E-value=1.8e-05  Score=60.82  Aligned_cols=55  Identities=22%  Similarity=0.254  Sum_probs=41.9

Q ss_pred             eEEEeCCCChHHHHHHHHHHHC-CCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKA-GDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~-Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +++||||+++||..+++.|.+. |++|++++|+ +.+.+    +.    ...+.+...|++|.++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~----~~----~~~v~~~~~D~~d~~~   58 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD----DW----RGKVSVRQLDYFNQES   58 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG----GG----BTTBEEEECCTTCHHH
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH----hh----hCCCEEEEcCCCCHHH
Confidence            4899999999999999999998 9999999998 43221    11    1235667778887654

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=97.77  E-value=1.2e-05  Score=63.47  Aligned_cols=56  Identities=20%  Similarity=0.050  Sum_probs=41.6

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCC-----CEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAG-----DNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~G-----a~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +++++||||++.||..++++|+++|     ++|++++|+ +...     +    ....+.+...|++|.++
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~----~~~~~~~~~~Dl~d~~~   62 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H----EDNPINYVQCDISDPDD   62 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C----CSSCCEEEECCTTSHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c----ccCceEEEEeecCCHHH
Confidence            4689999999999999999999999     999999998 3211     0    11234556667766543

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=97.77  E-value=1.3e-05  Score=63.41  Aligned_cols=59  Identities=19%  Similarity=0.303  Sum_probs=42.5

Q ss_pred             eEEEeCCCChHHHHHHHHHHHC-CCEEEEeecCh---hHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKA-GDNVIICSRSE---RVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~-Ga~Vvi~~r~~---~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .++||||+++||..+++.|++. |++|++++|+.   ..+. .+++.   ....+.+..+|+++.++
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-~~~~~---~~~~~~~~~~Dl~d~~~   64 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES-LSDIS---ESNRYNFEHADICDSAE   64 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGG-GTTTT---TCTTEEEEECCTTCHHH
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhh-hhhhh---cCCCeEEEECCCCCHHH
Confidence            4899999999999999999998 79999999862   1111 11221   12246677888887654

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=97.76  E-value=2e-05  Score=68.02  Aligned_cols=60  Identities=18%  Similarity=0.109  Sum_probs=44.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHC-CCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~-Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      ++++++++||||+++||..++++|++. |++|++++|+ +...+.    .   ....+.+...|+++.+
T Consensus       312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~----~---~~~~v~~v~~Dl~d~~  373 (660)
T 1z7e_A          312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----L---NHPHFHFVEGDISIHS  373 (660)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG----T---TCTTEEEEECCTTTCH
T ss_pred             hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh----c---cCCceEEEECCCCCcH
Confidence            357889999999999999999999998 8999999998 432211    1   1224667777888754

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=97.74  E-value=1.5e-05  Score=61.67  Aligned_cols=34  Identities=29%  Similarity=0.395  Sum_probs=31.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHC--CCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~--Ga~Vvi~~r~  113 (147)
                      +++++||||+++||..++++|++.  |++|++++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~   37 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIR   37 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            467999999999999999999998  8999999998

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=97.74  E-value=7.6e-05  Score=57.07  Aligned_cols=53  Identities=15%  Similarity=0.110  Sum_probs=41.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccch
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      +.++|||+ +.||..++++|++.|++|++++|+ +.....    ..    ..+.+...|+++.
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~----~~~~~~~~D~~d~   59 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAI----RA----SGAEPLLWPGEEP   59 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHH----HH----TTEEEEESSSSCC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhH----hh----CCCeEEEeccccc
Confidence            58999998 999999999999999999999999 443322    11    1256677787764

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.73  E-value=2.4e-05  Score=66.32  Aligned_cols=46  Identities=30%  Similarity=0.450  Sum_probs=34.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSL  123 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l  123 (147)
                      .+++|+++|||++ |+|++++..|++.|++|++++|+ +++++..+++
T Consensus       361 ~l~~k~vlV~GaG-Gig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~  407 (523)
T 2o7s_A          361 PLASKTVVVIGAG-GAGKALAYGAKEKGAKVVIANRTYERALELAEAI  407 (523)
T ss_dssp             -----CEEEECCS-HHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT
T ss_pred             ccCCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc
Confidence            4688999999995 99999999999999999999999 6666655544

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.68  E-value=7.1e-05  Score=59.13  Aligned_cols=41  Identities=17%  Similarity=0.200  Sum_probs=36.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      -.|++++|||+++|||..+++.+...|++|++++++ ++++.
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~  185 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY  185 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            468999999999999999999999999999999998 44443

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=97.68  E-value=3.2e-05  Score=60.57  Aligned_cols=60  Identities=15%  Similarity=0.245  Sum_probs=42.4

Q ss_pred             eEEEeCCCChHHHHHHHHHHHC---C---CEEEEeecCh-h-HHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKA---G---DNVIICSRSE-R-VDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~---G---a~Vvi~~r~~-~-~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .++||||+++||..++++|+++   |   ++|++++|+. . ..+..+++.   ....+.+..+|++|.++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~   69 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD---ADPRLRFVHGDIRDAGL   69 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT---TCTTEEEEECCTTCHHH
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc---cCCCeEEEEcCCCCHHH
Confidence            5899999999999999999997   8   8999999861 1 111111111   12346777888887654

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=97.68  E-value=2.3e-05  Score=60.87  Aligned_cols=52  Identities=17%  Similarity=0.179  Sum_probs=35.6

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccc
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAA  141 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~  141 (147)
                      |+++||||+++||.+++++|+++|..|++..++ ...+..         ...+.+...|+++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~---------~~~~~~~~~Dl~~   54 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV---------NEAARLVKADLAA   54 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS---------CTTEEEECCCTTT
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc---------CCCcEEEECcCCh
Confidence            579999999999999999999999555554444 221110         1235666777776

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.65  E-value=9.3e-05  Score=57.53  Aligned_cols=47  Identities=21%  Similarity=0.443  Sum_probs=41.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLR  124 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~  124 (147)
                      .+++|.++|+|+ +|+|++++..|++.|++|++++|+ +++++..+++.
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~  163 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQ  163 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHG
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcc
Confidence            578999999998 799999999999999999999999 77777766653

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.62  E-value=0.00019  Score=58.89  Aligned_cols=62  Identities=18%  Similarity=0.289  Sum_probs=48.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCC---CEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAG---DNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~G---a~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +.++|+|+ +|||..+++.|++.|   .+|++++|+ +++++..+++....+ ..+....+|+++.++
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~-~~~~~~~~D~~d~~~   67 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGY-GEIDITTVDADSIEE   67 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTC-CCCEEEECCTTCHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcC-CceEEEEecCCCHHH
Confidence            46888898 799999999999998   489999999 777777777754322 245667788877543

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=97.56  E-value=4.3e-05  Score=58.64  Aligned_cols=35  Identities=23%  Similarity=0.316  Sum_probs=32.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..++++||||+++||..++++|+++|++|++++|+
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   45 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ   45 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc
Confidence            45789999999999999999999999999999886

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=97.54  E-value=5.9e-05  Score=58.57  Aligned_cols=35  Identities=20%  Similarity=0.361  Sum_probs=31.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+++++||||+++||..++++|++.|++|++++|+
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~   36 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR   36 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecC
Confidence            35789999999999999999999999999988775

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=97.52  E-value=3.2e-05  Score=59.98  Aligned_cols=32  Identities=31%  Similarity=0.385  Sum_probs=29.4

Q ss_pred             eEEEeCCCChHHHHHHHHHHHC--CCEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKA--GDNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~--Ga~Vvi~~r~  113 (147)
                      .++||||+++||..++++|++.  |++|++++|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~   34 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIV   34 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESS
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCC
Confidence            3799999999999999999998  8899999886

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.51  E-value=0.00026  Score=55.63  Aligned_cols=49  Identities=14%  Similarity=0.331  Sum_probs=42.3

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      .++++|+++|+|+ +|+|++++..|++.|+ +|++++|+ ++++++.+++..
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~  172 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAA  172 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGG
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhc
Confidence            3578999999998 6999999999999996 89999999 777777777643

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.51  E-value=0.00027  Score=55.32  Aligned_cols=48  Identities=25%  Similarity=0.335  Sum_probs=41.3

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQSLR  124 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~l~  124 (147)
                      .++++|+++|+|+ +|+|++++..|++.|+ +|++++|+ +++++..+++.
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~  165 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD  165 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHC
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence            3578999999998 6999999999999995 89999999 77777766653

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.49  E-value=0.00017  Score=57.02  Aligned_cols=41  Identities=17%  Similarity=0.156  Sum_probs=36.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      -.|++++|+|+++|||..+++.+...|++|++++++ ++++.
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~  189 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRF  189 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            468999999999999999999999999999999998 54443

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.46  E-value=0.00021  Score=56.48  Aligned_cols=40  Identities=25%  Similarity=0.302  Sum_probs=35.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      -.|++++|||+++|||+.+++.+...|++|++++++ ++++
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~  184 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAE  184 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            468899999999999999999999999999999998 4443

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.45  E-value=0.00019  Score=56.56  Aligned_cols=40  Identities=15%  Similarity=0.231  Sum_probs=35.5

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      -.|++++|||+++|||+.+++.+...|++|++++++ ++++
T Consensus       139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~  179 (327)
T 1qor_A          139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ  179 (327)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            368999999999999999999999999999999998 4443

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=97.44  E-value=0.00013  Score=60.86  Aligned_cols=58  Identities=14%  Similarity=0.106  Sum_probs=42.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      ++|.++|+| ++|||.++++.|++.|++|++++|+ +++++..    +..+  .+....+|+++.+
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la----~~~~--~~~~~~~Dv~d~~   60 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLS----AGVQ--HSTPISLDVNDDA   60 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTT----TTCT--TEEEEECCTTCHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHH----HhcC--CceEEEeecCCHH
Confidence            468899997 7999999999999999999999998 5443332    2222  2445566776554

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.42  E-value=0.00033  Score=55.73  Aligned_cols=39  Identities=18%  Similarity=0.175  Sum_probs=35.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERV  116 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~  116 (147)
                      -.|++++|+|+++|||+.+++.+...|++|++++++ +++
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~  207 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE  207 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH
Confidence            468999999999999999999999999999999988 444

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.40  E-value=0.00023  Score=56.36  Aligned_cols=40  Identities=20%  Similarity=0.220  Sum_probs=35.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      -.|++++|+|+++|||..+++.+...|++|++++++ ++++
T Consensus       154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~  194 (345)
T 2j3h_A          154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVD  194 (345)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            468999999999999999999999999999999998 4443

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=97.40  E-value=0.00021  Score=59.94  Aligned_cols=34  Identities=38%  Similarity=0.518  Sum_probs=32.6

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +++++||||++.||..++..|++.|++|++++|+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~  180 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRK  180 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            5789999999999999999999999999999998

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=97.38  E-value=8.3e-05  Score=56.88  Aligned_cols=32  Identities=22%  Similarity=0.357  Sum_probs=30.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .++||||+++||..+++.|+++|++|++++|.
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK   38 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc
Confidence            79999999999999999999999999999885

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.38  E-value=0.0004  Score=55.50  Aligned_cols=40  Identities=23%  Similarity=0.250  Sum_probs=35.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      -.|++++|+||++|||..+++.+...|++|++++++ ++++
T Consensus       161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~  201 (354)
T 2j8z_A          161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQ  201 (354)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            468999999999999999999999999999999998 4443

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.38  E-value=0.00096  Score=53.24  Aligned_cols=52  Identities=12%  Similarity=0.187  Sum_probs=41.5

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-h---hHHHHHHHHHHHhC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-E---RVDSAVQSLREEFG  128 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~---~~~~~~~~l~~~~~  128 (147)
                      .++++|.++|.|+ +|+|++++..|++.|+ +|+++.|+ +   +++++.+++....+
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~  200 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTD  200 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSS
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccC
Confidence            4578999999997 8999999999999998 79999998 3   34555556655433

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=97.37  E-value=0.00014  Score=54.94  Aligned_cols=31  Identities=29%  Similarity=0.407  Sum_probs=28.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +++||||+++||.+++++|+ +|++|++++|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~   32 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNS   32 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESS
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCC
Confidence            58999999999999999999 58999999886

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.36  E-value=0.00036  Score=55.62  Aligned_cols=40  Identities=13%  Similarity=0.081  Sum_probs=35.3

Q ss_pred             CCC--CeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHH
Q 032098           78 LPP--YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVD  117 (147)
Q Consensus        78 l~g--kv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~  117 (147)
                      -.|  ++++|||+++|||..+++.+...|+ +|++++++ ++++
T Consensus       157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~  200 (357)
T 2zb4_A          157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCI  200 (357)
T ss_dssp             CTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred             CCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHH
Confidence            357  8999999999999999999999999 99999998 4443

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.34  E-value=0.00021  Score=48.82  Aligned_cols=35  Identities=17%  Similarity=0.311  Sum_probs=31.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ++++.++|+|+ +++|..+++.|.+.|++|++++++
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~   38 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDIN   38 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESC
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            56778999998 999999999999999999999998

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.33  E-value=0.00047  Score=55.11  Aligned_cols=40  Identities=20%  Similarity=0.254  Sum_probs=35.5

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      -.|++++|+|+++|||..+++.+...|++|++++++ ++++
T Consensus       169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~  209 (351)
T 1yb5_A          169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK  209 (351)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH
Confidence            468899999999999999999999999999999998 4443

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.33  E-value=0.00046  Score=47.66  Aligned_cols=38  Identities=29%  Similarity=0.614  Sum_probs=32.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      .++.++|+|+ +.+|..+++.|.+.|++|++++++ +..+
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~   43 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIE   43 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHH
Confidence            4568999998 679999999999999999999998 4433

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.27  E-value=0.00054  Score=54.43  Aligned_cols=40  Identities=23%  Similarity=0.332  Sum_probs=35.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHC-CCEEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~-Ga~Vvi~~r~-~~~~  117 (147)
                      -.|++++|+|+++|||+.+++.+... |++|++++++ ++++
T Consensus       169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~  210 (347)
T 1jvb_A          169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVE  210 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHH
T ss_pred             CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            36889999999999999999999998 9999999988 4433

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=97.25  E-value=0.00041  Score=55.17  Aligned_cols=31  Identities=26%  Similarity=0.453  Sum_probs=29.9

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCC-EEEEeec
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGD-NVIICSR  112 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r  112 (147)
                      .++||||++.||..++++|++.|. +|+..||
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~   33 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHR   33 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECC
Confidence            589999999999999999999998 9999999

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.23  E-value=0.00059  Score=53.79  Aligned_cols=45  Identities=18%  Similarity=0.325  Sum_probs=38.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQS  122 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~  122 (147)
                      .+++|.++|.|+ +|+|++++..|++.|+ +|++++|+ +++++..++
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~  184 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVRE  184 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHH
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            578999999998 7999999999999998 89999999 666665544

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=97.23  E-value=0.00029  Score=54.17  Aligned_cols=32  Identities=19%  Similarity=0.425  Sum_probs=30.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAG-DNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~  113 (147)
                      +++||||+++||..++++|++.| ++|++++|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~   33 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNL   33 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccC
Confidence            37999999999999999999999 899999987

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.20  E-value=0.00073  Score=53.91  Aligned_cols=40  Identities=28%  Similarity=0.305  Sum_probs=35.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      -.|++++|+||++|||..+++.+...|++|++++++ ++++
T Consensus       166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~  206 (353)
T 4dup_A          166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCE  206 (353)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            468899999999999999999999999999999988 4443

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=97.19  E-value=0.00048  Score=53.11  Aligned_cols=32  Identities=38%  Similarity=0.478  Sum_probs=30.6

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .|+||||++-||..++++|.++|++|+++.|+
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~   33 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRK   33 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            48999999999999999999999999999987

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=97.17  E-value=0.00032  Score=53.82  Aligned_cols=31  Identities=26%  Similarity=0.459  Sum_probs=29.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .++||||+++||..++++|+ +|++|++++|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~   32 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVH   32 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTT
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccc
Confidence            68999999999999999999 89999999875

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.13  E-value=0.00091  Score=54.06  Aligned_cols=41  Identities=29%  Similarity=0.368  Sum_probs=36.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      .+.+++++|+|+ ++||+.+++.+...|++|++.+++ ++++.
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~  204 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQY  204 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            478899999999 999999999999999999999998 54443

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.10  E-value=0.001  Score=52.54  Aligned_cols=40  Identities=20%  Similarity=0.321  Sum_probs=35.5

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      -.|++++|+||++|||..+++.+...|++|++++++ ++++
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~  187 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK  187 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            468899999999999999999999999999999998 4443

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.10  E-value=0.00097  Score=52.86  Aligned_cols=40  Identities=23%  Similarity=0.293  Sum_probs=35.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      -.|++++|+|+++|||+.+++.+...|++|++++++ ++++
T Consensus       165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~  205 (343)
T 2eih_A          165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLR  205 (343)
T ss_dssp             CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            368899999999999999999999999999999998 4443

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.09  E-value=0.0012  Score=52.48  Aligned_cols=39  Identities=26%  Similarity=0.268  Sum_probs=35.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERV  116 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~  116 (147)
                      -.|++++|+|+++|||..+++.+...|++|++++++ +++
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~  197 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT  197 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            468899999999999999999999999999999998 544

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.03  E-value=0.001  Score=52.68  Aligned_cols=40  Identities=15%  Similarity=0.140  Sum_probs=35.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      -.|++++|+|+++|||..+++.+...|++|++++++ ++++
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~  183 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTE  183 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            468899999999999999999998999999999988 5443

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.02  E-value=0.0013  Score=51.82  Aligned_cols=40  Identities=20%  Similarity=0.219  Sum_probs=35.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      -.|++++|+|+++|||..+++.+...|++|++++++ ++++
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~  179 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAA  179 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            368899999999999999999999999999999988 4443

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=96.94  E-value=0.0014  Score=50.99  Aligned_cols=40  Identities=20%  Similarity=0.286  Sum_probs=35.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      -.|++++|+|+++|+|..+++.+...|++|++++++ ++++
T Consensus       124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~  164 (302)
T 1iz0_A          124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA  164 (302)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            368899999999999999999999999999999998 4443

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.91  E-value=0.0015  Score=52.37  Aligned_cols=39  Identities=28%  Similarity=0.185  Sum_probs=34.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERV  116 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~  116 (147)
                      -.|++++|+|+++|||..+++.+...|++|++++++ +++
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~  201 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKS  201 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            368899999999999999999999999999999998 443

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.85  E-value=0.0014  Score=54.96  Aligned_cols=44  Identities=20%  Similarity=0.193  Sum_probs=34.0

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHC-CCEEEEeecC-hhHHHH
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRS-ERVDSA  119 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~-Ga~Vvi~~r~-~~~~~~  119 (147)
                      ...++++.++|+|+ +|+|+.++..|++. |.+|++++|+ +++++.
T Consensus        18 ~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~l   63 (467)
T 2axq_A           18 EGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQAL   63 (467)
T ss_dssp             -----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHH
T ss_pred             ccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHH
Confidence            34577889999997 99999999999998 7899999999 555443

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=96.84  E-value=0.0022  Score=52.67  Aligned_cols=40  Identities=23%  Similarity=0.214  Sum_probs=35.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERV  116 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~  116 (147)
                      .-.|++++|+|+++|||..+++.+...|++|++++++ +++
T Consensus       218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~  258 (447)
T 4a0s_A          218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKE  258 (447)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            3478999999999999999999999999999999887 443

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=96.81  E-value=0.0031  Score=50.77  Aligned_cols=42  Identities=29%  Similarity=0.305  Sum_probs=36.6

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      .+++++++|.|+ +|+|+.+++.+...|++|++++|+ ++++.+
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~  206 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYL  206 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence            367789999999 999999999999999999999999 555444

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=96.80  E-value=0.0013  Score=50.21  Aligned_cols=29  Identities=21%  Similarity=0.371  Sum_probs=26.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD  105 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga  105 (147)
                      .+.+++++||||++.||..+++.|++.|+
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~   31 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG   31 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC
Confidence            35678999999999999999999999885

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.80  E-value=0.0021  Score=51.44  Aligned_cols=37  Identities=30%  Similarity=0.362  Sum_probs=33.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecCh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSE  114 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~  114 (147)
                      .++|++++|+|+ +|||..+++.+...|++|+++++++
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~  214 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRRE  214 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            345999999999 9999999999999999999999874

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.79  E-value=0.0021  Score=50.99  Aligned_cols=38  Identities=13%  Similarity=0.139  Sum_probs=33.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      +++++|+||++|||...++.+...|++|++++++ ++++
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~  203 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIA  203 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            3899999999999999999999999999999988 5544

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.77  E-value=0.0036  Score=49.67  Aligned_cols=35  Identities=20%  Similarity=0.197  Sum_probs=33.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .|++++|+||+++||...++.+...|++|++++++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~  184 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASR  184 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            68999999999999999999999999999999997

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.69  E-value=0.0016  Score=51.21  Aligned_cols=43  Identities=14%  Similarity=0.213  Sum_probs=37.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAV  120 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~  120 (147)
                      .+++|.++|.|+ +|.|++++..|.+.|+ +|.++.|+ +++++..
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            478999999998 6999999999999998 89999999 6665543

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.68  E-value=0.0058  Score=41.31  Aligned_cols=32  Identities=25%  Similarity=0.583  Sum_probs=29.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +.++|+|+ +.+|..+++.|.+.|.+|++++++
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~   36 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDID   36 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECC
Confidence            46778886 999999999999999999999998

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.63  E-value=0.0047  Score=48.26  Aligned_cols=40  Identities=38%  Similarity=0.349  Sum_probs=36.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHH
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAV  120 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~  120 (147)
                      +|.++|.|+ +|.|++++..|++.|.+|.+..|+ +++++..
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la  158 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ  158 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            889999997 899999999999999999999999 7776665

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.62  E-value=0.0055  Score=49.81  Aligned_cols=45  Identities=22%  Similarity=0.331  Sum_probs=38.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQS  122 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~  122 (147)
                      +++||+++|.|. +.+|..+++.|.+.|++|++.|++ +++++..++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~  215 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE  215 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            689999999997 789999999999999999999998 656555544

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=96.61  E-value=0.0045  Score=50.20  Aligned_cols=40  Identities=20%  Similarity=0.360  Sum_probs=36.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      .+.|++++|.|+ ++||..+++.+...|++|++.|++ ++++
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~  205 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLR  205 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence            578999999998 999999999999999999999998 5443

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.59  E-value=0.01  Score=41.40  Aligned_cols=33  Identities=15%  Similarity=0.219  Sum_probs=29.0

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+.++|.|+ +.+|..+++.|.+.|.+|++++++
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~   35 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNL   35 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECC
Confidence            345777786 999999999999999999999997

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=96.47  E-value=0.0026  Score=44.14  Aligned_cols=42  Identities=17%  Similarity=0.267  Sum_probs=35.6

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHH
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQS  122 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~  122 (147)
                      ++.+.|.|+ +++|..+++.|...|++|++.+|+ +++++..++
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~   63 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEK   63 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHH
Confidence            789999996 999999999999999999999999 665554443

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.45  E-value=0.0076  Score=44.12  Aligned_cols=40  Identities=25%  Similarity=0.473  Sum_probs=33.6

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQ  121 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~  121 (147)
                      .+.|.|+++.+|..++..|++.|.+|++.+|+ +..++..+
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   42 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAA   42 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            46788989999999999999999999999998 55554443

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.42  E-value=0.0079  Score=47.65  Aligned_cols=35  Identities=26%  Similarity=0.303  Sum_probs=31.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      -.|++++|+||+++||..+++.+...|++|+++ ++
T Consensus       149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~  183 (343)
T 3gaz_A          149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-AR  183 (343)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-EC
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eC
Confidence            368899999999999999999999999999988 55

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=96.38  E-value=0.0067  Score=47.94  Aligned_cols=39  Identities=26%  Similarity=0.285  Sum_probs=33.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      -.|++++|+|+ +|||..+++.+...|++|++++++ ++++
T Consensus       163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~  202 (339)
T 1rjw_A          163 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLE  202 (339)
T ss_dssp             CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            36889999999 889999999999999999999988 4443

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.37  E-value=0.0016  Score=51.02  Aligned_cols=40  Identities=23%  Similarity=0.380  Sum_probs=35.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVD  117 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~  117 (147)
                      ++++|.++|.|+ +|+|++++..|++.|+ +|++++|+ ++++
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~  155 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFN  155 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGT
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHH
Confidence            478999999997 7999999999999998 89999999 5543

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=96.36  E-value=0.0082  Score=49.51  Aligned_cols=39  Identities=31%  Similarity=0.348  Sum_probs=34.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERV  116 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~  116 (147)
                      -.|.+++|+|++++||...++.+...|++|++++++ +++
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~  266 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA  266 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence            468899999999999999999999999999998887 443

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.30  E-value=0.0088  Score=48.88  Aligned_cols=44  Identities=27%  Similarity=0.462  Sum_probs=37.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQ  121 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~  121 (147)
                      .+.|++++|.|+ |+||..+++.+...|+ +|++++|+ +++++..+
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~  209 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR  209 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH
Confidence            468999999998 9999999999999998 89999998 55544443

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=96.30  E-value=0.0069  Score=42.48  Aligned_cols=39  Identities=15%  Similarity=0.252  Sum_probs=33.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERV  116 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~  116 (147)
                      ...++.++|.|+ +.+|..+++.|.+.|++|++++++ +.+
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~   55 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAF   55 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGG
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence            356678888886 999999999999999999999998 443

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.28  E-value=0.01  Score=47.53  Aligned_cols=39  Identities=18%  Similarity=0.197  Sum_probs=33.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERV  116 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~  116 (147)
                      -.|++++|+||++|||...++.+...|++|+++++.++.
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~  220 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDAS  220 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHH
Confidence            468899999999999999999998999999888844443

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=96.25  E-value=0.0035  Score=50.08  Aligned_cols=36  Identities=33%  Similarity=0.425  Sum_probs=31.0

Q ss_pred             CCCCe-EEEeCCCC-----------------h-HHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYN-VLITGSTK-----------------G-IGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv-~vVTG~s~-----------------G-IG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +.||. ++||+|+.                 | +|.++|++++.+|+.|+++.+.
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~   88 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA   88 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecC
Confidence            56777 88887654                 6 9999999999999999998876

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.25  E-value=0.0068  Score=47.85  Aligned_cols=44  Identities=23%  Similarity=0.360  Sum_probs=38.8

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      ..++||.++|.|+++-+|+.++..|+..|+.|.+++++ ..+++.
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~~~  200 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLY  200 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Confidence            36899999999999989999999999999999999987 555543

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.09  E-value=0.011  Score=46.08  Aligned_cols=37  Identities=24%  Similarity=0.297  Sum_probs=32.6

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      |+ ++|+|+++++|...++.+...|++|++++++ ++.+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~  185 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHG  185 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            46 9999999999999999999999999999988 5443

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.09  E-value=0.012  Score=46.67  Aligned_cols=34  Identities=29%  Similarity=0.305  Sum_probs=32.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      .|++++|+|+ ++||..+++.+...|+ +|++++++
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~  201 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPS  201 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            7889999999 9999999999999999 89999988

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=96.07  E-value=0.023  Score=39.14  Aligned_cols=38  Identities=24%  Similarity=0.413  Sum_probs=30.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      +++ .++|.|+ +.+|..+++.|.+.|.+|++++++ +..+
T Consensus         6 ~~~-~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~   44 (140)
T 3fwz_A            6 ICN-HALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVD   44 (140)
T ss_dssp             CCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHH
T ss_pred             CCC-CEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHH
Confidence            444 4566676 889999999999999999999999 4433

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.04  E-value=0.0078  Score=47.14  Aligned_cols=36  Identities=31%  Similarity=0.398  Sum_probs=32.2

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      .++|+|+++|+|...++.+...|++|++++++ ++++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~  188 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHD  188 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHH
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            79999999999999999998999999999988 5444

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.96  E-value=0.0079  Score=47.16  Aligned_cols=36  Identities=33%  Similarity=0.502  Sum_probs=32.0

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      .++|+|+++|+|...++.+...|++|++++++ ++++
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~  189 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAAD  189 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            79999999999999999888899999999988 5543

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=95.94  E-value=0.014  Score=46.75  Aligned_cols=39  Identities=26%  Similarity=0.319  Sum_probs=33.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      .|++++|+|+ +|||..+++.+...|++|++++++ ++++.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~  226 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEE  226 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            7889999996 999999999999999999999988 55443

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=95.93  E-value=0.016  Score=45.28  Aligned_cols=38  Identities=21%  Similarity=0.212  Sum_probs=33.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSER  115 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~  115 (147)
                      -.|.+++|+||++++|...++.+...|++|+.+++.++
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~  188 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN  188 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch
Confidence            46889999999999999999999999999988875543

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.89  E-value=0.018  Score=45.16  Aligned_cols=43  Identities=19%  Similarity=0.289  Sum_probs=38.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAV  120 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~  120 (147)
                      ++||.++|-|++.=+|+.++..|...|++|.+++++ ..+++.+
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~~  191 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSMT  191 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHHH
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHhh
Confidence            899999999999889999999999999999999987 6665543

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=95.87  E-value=0.027  Score=44.67  Aligned_cols=37  Identities=19%  Similarity=0.082  Sum_probs=32.3

Q ss_pred             CC-CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hh
Q 032098           79 PP-YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ER  115 (147)
Q Consensus        79 ~g-kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~  115 (147)
                      .| .+++|+|+++++|...++.....|++|+++.++ ++
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN  204 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            57 899999999999999998888889999888766 44

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=95.81  E-value=0.019  Score=43.89  Aligned_cols=36  Identities=31%  Similarity=0.398  Sum_probs=31.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      .++++.++|-|+ +|+|..+++.|++.|. +|.++|++
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d   64 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD   64 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            367788999986 7999999999999996 89999887

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=95.77  E-value=0.022  Score=45.05  Aligned_cols=35  Identities=26%  Similarity=0.228  Sum_probs=31.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      -.|++++|+|+ +++|...++.+...|++|++++++
T Consensus       167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~  201 (352)
T 1e3j_A          167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARS  201 (352)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCC
Confidence            36789999997 899999999888899999999888

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=95.75  E-value=0.025  Score=45.04  Aligned_cols=39  Identities=28%  Similarity=0.355  Sum_probs=33.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      -.|++++|+| ++++|...++.+...|++|++++++ ++++
T Consensus       188 ~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~  227 (363)
T 3uog_A          188 RAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLD  227 (363)
T ss_dssp             CTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHH
Confidence            4688999999 8999999999999999999999988 4433

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=95.75  E-value=0.019  Score=41.09  Aligned_cols=38  Identities=24%  Similarity=0.155  Sum_probs=31.5

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHC-CCEEEEeecC-hhH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRS-ERV  116 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~-Ga~Vvi~~r~-~~~  116 (147)
                      +.++.++|.| .+.+|..+++.|.+. |++|++++++ +..
T Consensus        37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~   76 (183)
T 3c85_A           37 PGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAA   76 (183)
T ss_dssp             CTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHH
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHH
Confidence            4455677777 499999999999999 9999999998 443

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.70  E-value=0.042  Score=42.38  Aligned_cols=41  Identities=22%  Similarity=0.220  Sum_probs=32.5

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQS  122 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~  122 (147)
                      +.+.|-|+ +.+|..+|..|+..|++|++.|++ +.+++..+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            44555554 789999999999999999999999 666655544

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.65  E-value=0.022  Score=44.98  Aligned_cols=44  Identities=20%  Similarity=0.310  Sum_probs=38.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      -.++||.++|-|.++=+|+.++..|+..|+.|.++.++ ..+++.
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~~~  201 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADH  201 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHHHH
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHHHH
Confidence            36899999999998889999999999999999999886 555543

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=95.62  E-value=0.022  Score=45.32  Aligned_cols=39  Identities=28%  Similarity=0.242  Sum_probs=33.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      -.|.+++|+|+ +++|...++.+...|++|++++++ ++++
T Consensus       178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~  217 (360)
T 1piw_A          178 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRE  217 (360)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence            36889999999 999999999888899999999988 5443

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=95.62  E-value=0.013  Score=46.21  Aligned_cols=33  Identities=21%  Similarity=0.257  Sum_probs=30.0

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCC-------EEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGD-------NVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga-------~Vvi~~r~  113 (147)
                      ..++||||++.||..++..|+..|.       +|++.|+.
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~   44 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIP   44 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCG
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCC
Confidence            3699999999999999999999885       89999987

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=95.57  E-value=0.026  Score=44.56  Aligned_cols=34  Identities=18%  Similarity=0.163  Sum_probs=31.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHC--CCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~--Ga~Vvi~~r~  113 (147)
                      .|.+++|+|+ +++|...++.+...  |++|++++++
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~  205 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRS  205 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCC
Confidence            7889999999 89999999988888  9999999987

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=95.56  E-value=0.026  Score=44.42  Aligned_cols=35  Identities=23%  Similarity=0.213  Sum_probs=31.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      -.|++++|+|+ +++|...++.+...|++|++++++
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~  199 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDID  199 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCC
Confidence            46889999987 899999999998999999999988

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.54  E-value=0.032  Score=42.54  Aligned_cols=44  Identities=27%  Similarity=0.357  Sum_probs=36.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQS  122 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~  122 (147)
                      .++| .+.|-|+ +++|++++..|.+.|++|.+++|+ +++++..++
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~  158 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEE  158 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence            5778 8888886 789999999999999999999999 655555443

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.54  E-value=0.028  Score=44.59  Aligned_cols=42  Identities=17%  Similarity=0.240  Sum_probs=37.1

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      .+++||.++|-|+++=+|+.++..|+..|+.|.+++++ ..++
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~  203 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED  203 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch
Confidence            36899999999998889999999999999999999986 5444

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.54  E-value=0.038  Score=43.06  Aligned_cols=37  Identities=27%  Similarity=0.366  Sum_probs=34.5

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+.|+++.|-|+ ++||+.+++.+...|++|++.+|+
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~  189 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARS  189 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECC
Confidence            4689999999996 899999999999999999999998

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.52  E-value=0.022  Score=44.92  Aligned_cols=44  Identities=18%  Similarity=0.283  Sum_probs=38.0

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      .+++||.++|-|+++=+|+.++..|...|+.|.++.++ ..+++.
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~  201 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSH  201 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHH
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHh
Confidence            36899999999998889999999999999999999887 555443

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=95.45  E-value=0.034  Score=43.88  Aligned_cols=39  Identities=21%  Similarity=0.276  Sum_probs=33.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      -.|.+++|.|+ +++|...++.+...|++|++++++ ++.+
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~  214 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQ  214 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHH
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence            46889999997 899999999988999999999988 5444

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.43  E-value=0.012  Score=45.40  Aligned_cols=42  Identities=21%  Similarity=0.379  Sum_probs=35.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      .++++.++|-|+ +++|.+++..|.+.|++|++.+|+ +++++.
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l  168 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKL  168 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHH
Confidence            467889999996 799999999999999999999999 555443

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.39  E-value=0.034  Score=43.86  Aligned_cols=45  Identities=20%  Similarity=0.261  Sum_probs=39.3

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAV  120 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~  120 (147)
                      .++.||.++|-|++.=+|+.++..|+..|++|.+++++ +.+.+.+
T Consensus       155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~  200 (288)
T 1b0a_A          155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHV  200 (288)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHH
T ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHHh
Confidence            36899999999998889999999999999999999988 6665544

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.36  E-value=0.048  Score=42.34  Aligned_cols=37  Identities=24%  Similarity=0.381  Sum_probs=34.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+.||++.|-|. ++||..+++.+...|++|++.+|+
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~  187 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARE  187 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECC
Confidence            3688999999995 899999999999999999999998

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=95.33  E-value=0.028  Score=44.88  Aligned_cols=35  Identities=20%  Similarity=0.260  Sum_probs=30.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHH-CCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~-~Ga~Vvi~~r~  113 (147)
                      .|.+++|+||++++|...++.+.. .|++|++++++
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~  206 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASR  206 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence            588999999999999988877665 68999999998

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.32  E-value=0.027  Score=44.68  Aligned_cols=44  Identities=16%  Similarity=0.299  Sum_probs=38.6

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      .++.||.++|-|++.-+|+.++..|+..|++|.+++++ +.+.+.
T Consensus       161 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~  205 (301)
T 1a4i_A          161 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEE  205 (301)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHHHH
Confidence            36899999999999889999999999999999999887 555443

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=95.31  E-value=0.034  Score=44.23  Aligned_cols=35  Identities=23%  Similarity=0.226  Sum_probs=31.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHC-CCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~-Ga~Vvi~~r~  113 (147)
                      -.|.+++|+|+ +++|...++.+... |++|++++++
T Consensus       185 ~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~  220 (359)
T 1h2b_A          185 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVK  220 (359)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            36789999999 79999999888778 9999999988

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=95.28  E-value=0.049  Score=43.79  Aligned_cols=48  Identities=17%  Similarity=0.232  Sum_probs=39.5

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCC--CEEEEeecC-hhHHHHHHHHHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      +.++.+.|+|+++.+|..++..++..|  .+|++.|++ +.++....+|..
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~   56 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRH   56 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhh
Confidence            456678999999999999999999998  479999999 666666666654

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=95.19  E-value=0.022  Score=44.88  Aligned_cols=34  Identities=26%  Similarity=0.373  Sum_probs=31.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      .|.+++|+|+ +|+|...++.+...|+ +|++++++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~  198 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPN  198 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            7889999999 9999999998888999 89999987

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=95.18  E-value=0.052  Score=43.43  Aligned_cols=38  Identities=24%  Similarity=0.289  Sum_probs=32.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      .|.+++|.|+ +++|...++.+...|++|++++++ ++++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~  232 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE  232 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            6789999997 899999999888899999999988 5444

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=95.17  E-value=0.048  Score=43.23  Aligned_cols=36  Identities=25%  Similarity=0.285  Sum_probs=30.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      -.|.+++|.|+++++|...++.....|++|+++...
T Consensus       166 ~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~  201 (357)
T 1zsy_A          166 QPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRD  201 (357)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             CCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecC
Confidence            368899999999999999998887889998877654

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.17  E-value=0.042  Score=45.33  Aligned_cols=49  Identities=27%  Similarity=0.234  Sum_probs=38.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      +++++|.+.|-|. ++.|.++|+.|.++|++|.+.|.+ .......+.|.+
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~   54 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLE   54 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHH
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHh
Confidence            4578999999998 788999999999999999999997 222233445544

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=95.15  E-value=0.047  Score=43.30  Aligned_cols=35  Identities=26%  Similarity=0.172  Sum_probs=30.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCE-EEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~-Vvi~~r~  113 (147)
                      -.|.+++|.|+ +++|...++.....|++ |++++++
T Consensus       178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~  213 (363)
T 3m6i_A          178 RLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDID  213 (363)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            36788999998 99999999988889998 8888887

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=95.08  E-value=0.06  Score=43.07  Aligned_cols=36  Identities=28%  Similarity=0.269  Sum_probs=31.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecCh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSE  114 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~~  114 (147)
                      -.|.+++|.|+ +++|...++.+...|+ +|+++++++
T Consensus       181 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~  217 (370)
T 4ej6_A          181 KAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQA  217 (370)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH
Confidence            36889999998 8999999998889999 888888883

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=95.04  E-value=0.048  Score=44.56  Aligned_cols=41  Identities=22%  Similarity=0.251  Sum_probs=35.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      .+.+++++|.|+ +++|+.+++.+...|++|+++|++ +.++.
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~  210 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQ  210 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence            367899999997 899999999999999999999998 54443

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=95.03  E-value=0.061  Score=42.96  Aligned_cols=39  Identities=15%  Similarity=0.152  Sum_probs=32.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERV  116 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~  116 (147)
                      -.|.+++|.|+++++|...++.....|++|+.+...+++
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~  201 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNF  201 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHH
Confidence            468899999999999999999999999998877533443

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=94.99  E-value=0.046  Score=42.45  Aligned_cols=44  Identities=20%  Similarity=0.290  Sum_probs=36.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHHH
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQSL  123 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~l  123 (147)
                      .++.++|-|+ +|.|++++..|...|+ +|.++.|+ +++++..+++
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            4678888886 8999999999999997 79999999 7777666554

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=94.98  E-value=0.065  Score=43.31  Aligned_cols=35  Identities=37%  Similarity=0.454  Sum_probs=31.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      -.|.+++|+|+ +++|...++.+...|+ +|++++++
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~  247 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPS  247 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            46889999998 8999999998888999 89998887

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=94.94  E-value=0.053  Score=43.46  Aligned_cols=35  Identities=26%  Similarity=0.291  Sum_probs=31.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~  113 (147)
                      -.|.+++|+| ++++|...++.+...| ++|++++++
T Consensus       194 ~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~  229 (380)
T 1vj0_A          194 FAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGS  229 (380)
T ss_dssp             CBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESC
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCC
Confidence            3578999999 8999999999888899 599999988

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=94.93  E-value=0.061  Score=42.60  Aligned_cols=35  Identities=23%  Similarity=0.226  Sum_probs=30.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      -.|.+++|+|+ +++|...++.+...|+ +|++++++
T Consensus       170 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~  205 (356)
T 1pl8_A          170 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLS  205 (356)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            36789999996 8999999998888999 89999988

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=94.85  E-value=0.04  Score=42.34  Aligned_cols=40  Identities=23%  Similarity=0.440  Sum_probs=33.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDS  118 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~  118 (147)
                      .+++ .++|.|+ +|.|++++..|++.|+ +|++.+|+ +++++
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~  147 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKA  147 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHT
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            3567 7888887 8999999999999998 89999999 65544

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=94.83  E-value=0.057  Score=43.69  Aligned_cols=40  Identities=20%  Similarity=0.268  Sum_probs=35.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      .+.+++++|.|+ +++|+.+++.+...|++|++.|++ +.++
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~  209 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKE  209 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            468999999996 899999999999999999999998 5443

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=94.81  E-value=0.072  Score=42.44  Aligned_cols=39  Identities=18%  Similarity=0.295  Sum_probs=32.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~  117 (147)
                      -.|++++|+|+ +++|...++.+...|+ +|++++++ ++++
T Consensus       191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~  231 (374)
T 1cdo_A          191 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFE  231 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence            46789999995 8999999998888999 79999888 4443

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=94.79  E-value=0.085  Score=43.67  Aligned_cols=35  Identities=23%  Similarity=0.308  Sum_probs=32.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEE-Eeec
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVI-ICSR  112 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vv-i~~r  112 (147)
                      +++||+++|+| .+.+|...++.|.+.|++|+ +.|.
T Consensus       215 ~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~  250 (419)
T 3aoe_E          215 DLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATS  250 (419)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcC
Confidence            68999999999 68899999999999999988 8888

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=94.77  E-value=0.074  Score=42.36  Aligned_cols=39  Identities=15%  Similarity=0.235  Sum_probs=32.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~  117 (147)
                      -.|++++|+|+ +++|...++.+...|+ +|++++++ ++++
T Consensus       190 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~  230 (374)
T 2jhf_A          190 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFA  230 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            36789999995 8999999998888999 79999888 4443

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=94.74  E-value=0.076  Score=42.31  Aligned_cols=39  Identities=18%  Similarity=0.209  Sum_probs=32.5

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~  117 (147)
                      -.|.+++|+|+ +++|...++.+...|+ +|++++++ ++++
T Consensus       194 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  234 (376)
T 1e3i_A          194 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP  234 (376)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            36789999995 8999999998888999 79999888 4443

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=94.73  E-value=0.05  Score=42.29  Aligned_cols=38  Identities=24%  Similarity=0.189  Sum_probs=32.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      -.|.+++|.|+ +++|...++.....|++|+.++ + ++.+
T Consensus       141 ~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~  179 (315)
T 3goh_A          141 TKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQA  179 (315)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHH
Confidence            36889999999 9999999998888999999998 6 5444

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=94.72  E-value=0.076  Score=44.80  Aligned_cols=39  Identities=21%  Similarity=0.266  Sum_probs=35.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERV  116 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~  116 (147)
                      .+.|++++|.|. ++||..+++.+...|++|++.+++ +.+
T Consensus       271 ~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~  310 (494)
T 3ce6_A          271 LIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINA  310 (494)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            578999999997 999999999999999999999998 443

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=94.65  E-value=0.054  Score=39.89  Aligned_cols=35  Identities=29%  Similarity=0.491  Sum_probs=30.3

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      .++|.|+ +.+|..+++.|.+.|.+|++++++ +..+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~   37 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCE   37 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH
Confidence            4788896 889999999999999999999998 4443

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=94.64  E-value=0.088  Score=42.60  Aligned_cols=36  Identities=25%  Similarity=0.388  Sum_probs=33.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +++||++.|.|. +.||..+++.+...|++|++.|.+
T Consensus       172 ~L~GktV~I~G~-GnVG~~~A~~l~~~GakVvvsD~~  207 (355)
T 1c1d_A          172 SLDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTD  207 (355)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            589999999975 899999999999999999999988

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=94.62  E-value=0.063  Score=42.71  Aligned_cols=39  Identities=21%  Similarity=0.266  Sum_probs=32.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~  117 (147)
                      -.|.+++|+|+ +++|...++.+...|+ +|++++++ ++++
T Consensus       189 ~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~  229 (373)
T 2fzw_A          189 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA  229 (373)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            46789999996 8999999998888899 79999887 4443

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=94.60  E-value=0.13  Score=39.74  Aligned_cols=38  Identities=16%  Similarity=0.330  Sum_probs=31.6

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      +.+.|-|+ +.+|..+|..|++.|.+|++.|++ +.+++.
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~   54 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   54 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            45666676 899999999999999999999999 655544

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=94.59  E-value=0.065  Score=42.54  Aligned_cols=38  Identities=26%  Similarity=0.270  Sum_probs=32.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      .|.+++|+|+ +++|...++.+...|++|++++++ ++++
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~  218 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKRE  218 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHH
Confidence            6889999985 999999999888889999999988 5443

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=94.53  E-value=0.081  Score=41.95  Aligned_cols=43  Identities=19%  Similarity=0.257  Sum_probs=34.0

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCC--CEEEEeecChhHHHHHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSERVDSAVQSLR  124 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~~~~~~~~~~l~  124 (147)
                      ..+.||||++.+|..++..|+..|  .+|++.|+++. +....++.
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~dL~   53 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTADIS   53 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHHhh
Confidence            369999999999999999999988  78999998843 33333443

>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*

Probab=94.53  E-value=0.082  Score=42.12  Aligned_cols=42  Identities=29%  Similarity=0.428  Sum_probs=32.2

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLR  124 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~  124 (147)
                      .|-|-|+ +=+|..+|..++..|.+|++.|.+ +.+++..+.+.
T Consensus         8 ~VaViGa-G~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   50 (319)
T 3ado_A            8 DVLIVGS-GLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIR   50 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHH
T ss_pred             eEEEECC-cHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHH
Confidence            3444455 889999999999999999999999 66555544443

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=94.52  E-value=0.12  Score=41.12  Aligned_cols=43  Identities=16%  Similarity=0.101  Sum_probs=34.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQSLR  124 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~l~  124 (147)
                      ..+.|.|+ +.+|..++..|+..|. +|++.|++ +.++....++.
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~   54 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLS   54 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHH
Confidence            36778887 9999999999999997 99999999 66665444443

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=94.48  E-value=0.057  Score=40.92  Aligned_cols=36  Identities=25%  Similarity=0.375  Sum_probs=33.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +++||.++|-|| +.+|...++.|++.|++|++++.+
T Consensus        28 ~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~   63 (223)
T 3dfz_A           28 DLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPT   63 (223)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSS
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCC
Confidence            689999999998 589999999999999999999877

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=94.43  E-value=0.07  Score=44.71  Aligned_cols=37  Identities=19%  Similarity=0.266  Sum_probs=34.0

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .++.||+++|.|. +.||+.+|+.+...|++|++.+++
T Consensus       243 ~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~d  279 (464)
T 3n58_A          243 VMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVD  279 (464)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4689999999997 569999999999999999999987

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=94.31  E-value=0.073  Score=42.17  Aligned_cols=34  Identities=18%  Similarity=0.223  Sum_probs=29.3

Q ss_pred             CCCeEEEeCCCChHHHHH-HHHH-HHCCCE-EEEeecC
Q 032098           79 PPYNVLITGSTKGIGYAL-AKEF-LKAGDN-VIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~-a~~L-a~~Ga~-Vvi~~r~  113 (147)
                      .+.+++|+|+ +++|... ++.+ ...|++ |+.++++
T Consensus       172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~  208 (357)
T 2b5w_A          172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRR  208 (357)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCC
Confidence            3489999999 9999999 7776 678997 9999988

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=94.29  E-value=0.12  Score=40.39  Aligned_cols=44  Identities=11%  Similarity=0.145  Sum_probs=34.8

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCC--EEEEeec--C-hhHHHHHHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSR--S-ERVDSAVQSLRE  125 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga--~Vvi~~r--~-~~~~~~~~~l~~  125 (147)
                      .+.||||++.+|..++..|+..|.  ++++.|+  + +.++....++..
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~   50 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNH   50 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHH
Confidence            589999999999999999998874  6889999  7 445544555544

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=94.27  E-value=0.055  Score=43.40  Aligned_cols=35  Identities=20%  Similarity=0.274  Sum_probs=30.8

Q ss_pred             CCCeEEEeC-CCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITG-STKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG-~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .|..++|.| |++++|...++.+...|++|++++++
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~  205 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRK  205 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESS
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            567788886 99999999999888899999999988

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=94.21  E-value=0.05  Score=43.50  Aligned_cols=39  Identities=28%  Similarity=0.330  Sum_probs=32.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~  117 (147)
                      -.|.+++|.|+ +++|...++.+...|+ +|++++++ ++++
T Consensus       192 ~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~  232 (378)
T 3uko_A          192 EPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYE  232 (378)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            36788999998 9999999998888999 79999988 4443

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=94.20  E-value=0.11  Score=41.34  Aligned_cols=35  Identities=14%  Similarity=0.174  Sum_probs=30.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      -.|++++|+|+ +++|...++.+...|+ +|++++++
T Consensus       189 ~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~  224 (371)
T 1f8f_A          189 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIV  224 (371)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            36789999995 8999999988888898 68889888

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=94.19  E-value=0.092  Score=41.79  Aligned_cols=39  Identities=18%  Similarity=0.322  Sum_probs=32.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~  117 (147)
                      -.|.+++|.|+ ++||...++.....|+ +|++++++ ++++
T Consensus       190 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  230 (373)
T 1p0f_A          190 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFP  230 (373)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHH
Confidence            36789999995 8999999998888898 79999887 4443

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=94.17  E-value=0.16  Score=40.46  Aligned_cols=47  Identities=17%  Similarity=0.121  Sum_probs=37.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHHHHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      ++.+.+.|.|+ +.+|..++..|+..|. +|++.|++ +.++....++..
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~   53 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAE   53 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHH
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhc
Confidence            34567888898 9999999999999997 99999999 666555555544

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=94.17  E-value=0.09  Score=41.51  Aligned_cols=35  Identities=11%  Similarity=0.078  Sum_probs=30.5

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      -.|.+++|.|+ ++||...++.+...|+ +|++++++
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~  200 (352)
T 3fpc_A          165 KLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSR  200 (352)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCC
Confidence            35788999985 8999999998888999 79999987

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=94.07  E-value=0.2  Score=39.45  Aligned_cols=64  Identities=20%  Similarity=0.314  Sum_probs=44.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC--h-----------------hHHHHHHHHHHHhCCceEEEEe
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS--E-----------------RVDSAVQSLREEFGEQHVCVTW  136 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~--~-----------------~~~~~~~~l~~~~~~~~v~~~~  136 (147)
                      .++++.++|-|+ +|+|..+++.|++.| .++.++|.+  +                 +.+.+.+.+.+..+...+....
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~  111 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN  111 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence            577788888887 899999999999999 678898876  1                 3344445554443344555555


Q ss_pred             ccccc
Q 032098          137 QHSAA  141 (147)
Q Consensus       137 ~Dvs~  141 (147)
                      .++++
T Consensus       112 ~~l~~  116 (292)
T 3h8v_A          112 YNITT  116 (292)
T ss_dssp             CCTTS
T ss_pred             ccCCc
Confidence            55543

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=94.05  E-value=0.13  Score=41.35  Aligned_cols=35  Identities=26%  Similarity=0.282  Sum_probs=30.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      -.|.+++|.|+ +++|...++.....|+ +|++++++
T Consensus       184 ~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~  219 (398)
T 1kol_A          184 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLN  219 (398)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCC
Confidence            36789999995 9999999988888999 68888887

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=94.04  E-value=0.084  Score=42.51  Aligned_cols=35  Identities=26%  Similarity=0.313  Sum_probs=30.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      -.|.+++|.|+ +++|...++.+...|+ +|+.++++
T Consensus       184 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~  219 (398)
T 2dph_A          184 KPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQN  219 (398)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            36889999996 9999999988877899 89999988

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=93.99  E-value=0.063  Score=42.21  Aligned_cols=43  Identities=14%  Similarity=0.302  Sum_probs=37.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHC--CCEEEEeecC-hhHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRS-ERVDSA  119 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~--Ga~Vvi~~r~-~~~~~~  119 (147)
                      +++||.++|-|++.=+|+.++..|+..  |++|.++.++ +.+.+.
T Consensus       155 ~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L~~~  200 (281)
T 2c2x_A          155 SIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLPAL  200 (281)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHHHHH
Confidence            689999999999888899999999999  8999999888 555543

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=93.99  E-value=0.39  Score=38.32  Aligned_cols=47  Identities=15%  Similarity=0.322  Sum_probs=38.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC--EEEEeecC-hhHHHHHHHHHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga--~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      ...+.+.|.|+ +++|..++..|+..|.  +|++.|++ +.++....+|..
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~   66 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQH   66 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhh
Confidence            45567888997 8999999999999886  89999999 667777777764

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=93.99  E-value=0.13  Score=42.85  Aligned_cols=37  Identities=16%  Similarity=0.212  Sum_probs=34.1

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+.||+++|.|. +.||+.+++.+...|++|++++++
T Consensus       216 ~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~d  252 (435)
T 3gvp_A          216 MMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEID  252 (435)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             ceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4689999999998 579999999999999999999988

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=93.97  E-value=0.2  Score=39.87  Aligned_cols=46  Identities=17%  Similarity=0.270  Sum_probs=37.6

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCC--EEEEeecC-hhHHHHHHHHHHH
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRS-ERVDSAVQSLREE  126 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga--~Vvi~~r~-~~~~~~~~~l~~~  126 (147)
                      .+.+.|.|+ +.+|..++..|+..|.  +|++.|++ +.++....+|...
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~   53 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHG   53 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhc
Confidence            457888996 9999999999999886  89999999 6677666667543

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=93.90  E-value=0.14  Score=42.99  Aligned_cols=41  Identities=20%  Similarity=0.326  Sum_probs=33.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSL  123 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l  123 (147)
                      |+.||  |.+-+|..+|..|+..|.+|++.|++ +.+++..+.+
T Consensus         7 kVgVI--GaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i   48 (483)
T 3mog_A            7 TVAVI--GSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGI   48 (483)
T ss_dssp             CEEEE--CCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHH
T ss_pred             EEEEE--CcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Confidence            56666  55899999999999999999999999 6666655543

>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*

Probab=93.88  E-value=0.12  Score=40.96  Aligned_cols=44  Identities=20%  Similarity=0.378  Sum_probs=39.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAV  120 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~  120 (147)
                      ++.||.++|-|.+.=+|+.++..|..++|.|.++... ..+++.+
T Consensus       176 ~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T~dl~~~~  220 (303)
T 4b4u_A          176 EIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRTQNLPELV  220 (303)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHH
T ss_pred             CCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCCCCHHHHh
Confidence            6899999999999999999999999999999999877 6665544

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=93.81  E-value=0.16  Score=39.86  Aligned_cols=43  Identities=21%  Similarity=0.329  Sum_probs=33.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCC--EEEEeec--C-hhHHHHHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSR--S-ERVDSAVQSLR  124 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga--~Vvi~~r--~-~~~~~~~~~l~  124 (147)
                      .++||||++.+|..++..|+..|.  ++++.|+  + +.++....++.
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~   49 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIY   49 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHH
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHH
Confidence            589999999999999999998873  6889998  6 44544444454

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=93.81  E-value=0.12  Score=38.25  Aligned_cols=36  Identities=28%  Similarity=0.389  Sum_probs=30.2

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      +.+.|.| .+.+|..++..|.+.|.+|++.+|+ +..+
T Consensus        29 ~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~   65 (215)
T 2vns_A           29 PKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTA   65 (215)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            3566677 7999999999999999999999998 5444

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=93.81  E-value=0.16  Score=40.57  Aligned_cols=48  Identities=15%  Similarity=0.220  Sum_probs=38.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC--EEEEeecC-hhHHHHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga--~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      ...++.+.|+|+ +++|..++..|+..|.  +|++.|++ +.++....+|..
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~   56 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLED   56 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhh
Confidence            345668899996 9999999999998886  89999999 666666666654

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=93.71  E-value=0.16  Score=38.92  Aligned_cols=38  Identities=16%  Similarity=0.240  Sum_probs=32.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      +.+.|-|+++.+|..++..|.+.|.+|++.+|+ +..++
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~   50 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDR   50 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            368888998999999999999999999999998 54443

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=93.68  E-value=0.22  Score=37.92  Aligned_cols=36  Identities=28%  Similarity=0.359  Sum_probs=30.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      .+.++.++|-|+ +|+|..+++.|+..|. ++.++|.+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            367788999998 7899999999999995 68887654

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=93.57  E-value=0.14  Score=40.23  Aligned_cols=35  Identities=17%  Similarity=0.211  Sum_probs=29.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHC-CCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~-Ga~Vvi~~r~  113 (147)
                      -.|.+++|.|+ +++|...++.+... |++|++++++
T Consensus       170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~  205 (345)
T 3jv7_A          170 GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLD  205 (345)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            46789999998 99999988877666 7899999988

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=93.51  E-value=0.13  Score=42.05  Aligned_cols=41  Identities=15%  Similarity=0.150  Sum_probs=35.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      .+.++.++|.|+ +.+|..+++.+...|++|++.|++ +.++.
T Consensus       181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~  222 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQ  222 (381)
T ss_dssp             EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            357889999999 799999999999999999999999 54443

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=93.47  E-value=0.026  Score=39.98  Aligned_cols=50  Identities=12%  Similarity=-0.067  Sum_probs=34.5

Q ss_pred             hHHHHHHHHHHHCCCEEEEeecC-hhHH---HHHHHHHHHhCCceEEEEeccccch
Q 032098           91 GIGYALAKEFLKAGDNVIICSRS-ERVD---SAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        91 GIG~~~a~~La~~Ga~Vvi~~r~-~~~~---~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      -++.++++.|++.|++|++.+|+ +...   +..+++. +.|. .+....+|+++.
T Consensus        27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~-~~G~-~~~~i~~Dv~~~   80 (157)
T 3gxh_A           27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVT-QAGM-DYVYIPVDWQNP   80 (157)
T ss_dssp             CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHH-HTTC-EEEECCCCTTSC
T ss_pred             CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHH-HcCC-eEEEecCCCCCC
Confidence            36789999999999999999887 3221   1233443 3343 456667799887

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=93.44  E-value=0.11  Score=41.47  Aligned_cols=37  Identities=16%  Similarity=0.180  Sum_probs=34.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ++.||.++|-|++.=+|..+|+.|+..|++|.+++|+
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~  210 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN  210 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence            6899999999998878999999999999999999775

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=93.43  E-value=0.16  Score=40.23  Aligned_cols=33  Identities=18%  Similarity=0.201  Sum_probs=29.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCC-------EEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGD-------NVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga-------~Vvi~~r~  113 (147)
                      ..+.|||+++.+|..++..|+..|.       +|++.|++
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~   45 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP   45 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence            4799999999999999999999885       79999987

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=93.36  E-value=0.25  Score=39.05  Aligned_cols=43  Identities=14%  Similarity=0.181  Sum_probs=34.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQSLR  124 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~l~  124 (147)
                      +.+.|.|+ +.+|..++..|+..|. +|++.|++ +.++....++.
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~   49 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTS   49 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHH
Confidence            46778887 9999999999999997 89999999 66665554544

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=93.29  E-value=0.29  Score=38.78  Aligned_cols=42  Identities=17%  Similarity=0.124  Sum_probs=33.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQSL  123 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~l  123 (147)
                      +.+.|.|+ +.+|..++..|+..|. +|++.|++ +.++....++
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l   58 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDL   58 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHH
Confidence            36778887 9999999999999998 99999999 6666543333

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=93.28  E-value=0.26  Score=38.56  Aligned_cols=38  Identities=18%  Similarity=0.156  Sum_probs=32.0

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSA  119 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~  119 (147)
                      +.+.|.|+ +.+|..++..|+..|. +|++.|++ +.++..
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~   44 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGK   44 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHH
Confidence            46778887 8999999999999997 99999999 555553

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=93.07  E-value=0.51  Score=37.91  Aligned_cols=49  Identities=18%  Similarity=0.293  Sum_probs=36.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-------EEEEeecCh---hHHHHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-------NVIICSRSE---RVDSAVQSLRE  125 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-------~Vvi~~r~~---~~~~~~~~l~~  125 (147)
                      .++.-.+.|+||+++||..++..|+....       ++.+.|.++   .++-...+|..
T Consensus        21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~   79 (345)
T 4h7p_A           21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELED   79 (345)
T ss_dssp             -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhh
Confidence            45556899999999999999999987542       688999873   34445556644

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=92.98  E-value=0.23  Score=41.26  Aligned_cols=38  Identities=16%  Similarity=0.260  Sum_probs=34.4

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..++.||+++|-|. +.||+.+|+.|...|++|++++++
T Consensus       206 g~~L~GktVgIiG~-G~IG~~vA~~Lka~Ga~Viv~D~~  243 (436)
T 3h9u_A          206 DVMIAGKTACVCGY-GDVGKGCAAALRGFGARVVVTEVD  243 (436)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCcccCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCC
Confidence            34689999999995 789999999999999999999998

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=92.93  E-value=0.32  Score=38.55  Aligned_cols=45  Identities=18%  Similarity=0.186  Sum_probs=35.7

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHHHHH
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      .+.+.|.| ++.+|..++..|+..|. +|++.|++ +.++....+|..
T Consensus         5 ~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~   51 (321)
T 3p7m_A            5 RKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQ   51 (321)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHT
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHh
Confidence            35677778 49999999999999887 99999999 666655666653

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=92.88  E-value=0.19  Score=38.85  Aligned_cols=37  Identities=14%  Similarity=0.144  Sum_probs=29.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      |+.+|  |.+.+|..++..|++.|.+|++.+|+ +..++.
T Consensus         9 ~I~iI--G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~   46 (303)
T 3g0o_A            9 HVGIV--GLGSMGMGAARSCLRAGLSTWGADLNPQACANL   46 (303)
T ss_dssp             EEEEE--CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             eEEEE--CCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHH
Confidence            45555  56899999999999999999999999 544443

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=92.84  E-value=0.28  Score=38.29  Aligned_cols=36  Identities=19%  Similarity=0.254  Sum_probs=29.6

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      .+.|-|+ +.+|..++..|++.|.+|.+.+|+ +.+++
T Consensus         6 ki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~   42 (359)
T 1bg6_A            6 TYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKE   42 (359)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHH
Confidence            4666675 899999999999999999999998 44443

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=92.78  E-value=0.4  Score=38.41  Aligned_cols=36  Identities=25%  Similarity=0.431  Sum_probs=30.6

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~  113 (147)
                      .++++.|+|-|+ +|+|..+++.|+..| .++.++|.+
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D  151 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDND  151 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCC
Confidence            356778888887 899999999999999 478888875

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=92.61  E-value=0.26  Score=40.56  Aligned_cols=39  Identities=13%  Similarity=0.193  Sum_probs=34.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      +.+..++|.|+ +.+|..+++.+...|++|++.|++ +.++
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~  227 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKE  227 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence            57789999999 799999999999999999999999 4443

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=92.52  E-value=0.34  Score=37.80  Aligned_cols=41  Identities=17%  Similarity=0.392  Sum_probs=33.2

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCC--EEEEeecC-hhHHHHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSRS-ERVDSAVQSL  123 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga--~Vvi~~r~-~~~~~~~~~l  123 (147)
                      .+.|.|+ +.+|..++..|+..|.  +|++.|++ +.++....++
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l   45 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDI   45 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhh
Confidence            5678888 9999999999999998  89999999 5555444444

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=92.50  E-value=0.28  Score=38.46  Aligned_cols=39  Identities=23%  Similarity=0.344  Sum_probs=29.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      ++.|+.+|  |.+.+|..++..|++.|.+|.+.+|+ +..+.
T Consensus        13 ~~~kI~iI--G~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~   52 (335)
T 1z82_A           13 MEMRFFVL--GAGSWGTVFAQMLHENGEEVILWARRKEIVDL   52 (335)
T ss_dssp             -CCEEEEE--CCSHHHHHHHHHHHHTTCEEEEECSSHHHHHH
T ss_pred             cCCcEEEE--CcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence            34455544  45899999999999999999999998 54443

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=92.49  E-value=0.24  Score=37.25  Aligned_cols=36  Identities=22%  Similarity=0.402  Sum_probs=29.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+.++.+-|-| .+.+|.+++..|++.|.+|++.+|+
T Consensus        16 ~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~   51 (245)
T 3dtt_A           16 YFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRD   51 (245)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             ccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            45666666665 7999999999999999999999999

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=92.49  E-value=0.35  Score=37.74  Aligned_cols=35  Identities=23%  Similarity=0.246  Sum_probs=28.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHC-CCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~-Ga~Vvi~~r~  113 (147)
                      -.|.+++|.|+ +|+|...++.+... |++|+.++++
T Consensus       162 ~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~  197 (348)
T 4eez_A          162 KPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDIN  197 (348)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESC
T ss_pred             CCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECc
Confidence            46889999987 78888777777655 7899999988

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=92.46  E-value=0.14  Score=37.89  Aligned_cols=41  Identities=34%  Similarity=0.376  Sum_probs=32.5

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEE-eecC-hhHHHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVII-CSRS-ERVDSAVQS  122 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi-~~r~-~~~~~~~~~  122 (147)
                      +.+.|-| .+.+|..++..|++.|.+|++ .+|+ +.+++..++
T Consensus        24 mkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~   66 (220)
T 4huj_A           24 TTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDR   66 (220)
T ss_dssp             CCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHH
Confidence            3566667 689999999999999999998 8888 666554443

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=92.40  E-value=0.35  Score=37.86  Aligned_cols=44  Identities=14%  Similarity=0.104  Sum_probs=35.6

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      +.+.|.|+ +.+|..++..|+..|. +|++.|++ +.++....++..
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~   48 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYE   48 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHH
Confidence            36888898 9999999999999996 89999998 666655555543

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=92.33  E-value=0.41  Score=37.86  Aligned_cols=36  Identities=14%  Similarity=0.105  Sum_probs=31.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      +++.+.+.|.|+ +.+|..++..|+..|. +|++.|++
T Consensus         5 ~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~   41 (315)
T 3tl2_A            5 TIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIP   41 (315)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEecc
Confidence            345678888996 9999999999999998 99999998

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=92.30  E-value=0.26  Score=37.69  Aligned_cols=37  Identities=35%  Similarity=0.459  Sum_probs=29.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      .+-|-| .+.+|..++..|++.|.+|++.+|+ +..++.
T Consensus         3 ~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~   40 (287)
T 3pef_A            3 KFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEEL   40 (287)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHH
T ss_pred             EEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH
Confidence            344455 5899999999999999999999999 555443

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=92.26  E-value=0.37  Score=36.72  Aligned_cols=35  Identities=17%  Similarity=0.421  Sum_probs=29.2

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      .+.|-|+ +.+|..++..|++.|.+|++.+|+ +..+
T Consensus         5 ~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~   40 (316)
T 2ew2_A            5 KIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIE   40 (316)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             eEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHH
Confidence            4666675 899999999999999999999998 4443

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=92.20  E-value=0.39  Score=38.39  Aligned_cols=37  Identities=22%  Similarity=0.241  Sum_probs=32.6

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+.+|+++|.|+ +.+|+.+++++.+.|.+|+++|.+
T Consensus         8 ~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~   44 (377)
T 3orq_A            8 KLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPS   44 (377)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECC
Confidence            4568899999986 679999999999999999998875

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=92.17  E-value=0.39  Score=35.93  Aligned_cols=38  Identities=16%  Similarity=0.241  Sum_probs=30.2

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCC----EEEEeecC-hhHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGD----NVIICSRS-ERVDSAV  120 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga----~Vvi~~r~-~~~~~~~  120 (147)
                      |+.+| | .+.+|..++..|.+.|.    +|++.+|+ +.+++..
T Consensus         4 ~i~iI-G-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~   46 (247)
T 3gt0_A            4 QIGFI-G-CGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNAS   46 (247)
T ss_dssp             CEEEE-C-CSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHH
T ss_pred             eEEEE-C-ccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHH
Confidence            44444 5 68999999999999998    99999999 5555443

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=92.16  E-value=0.31  Score=38.05  Aligned_cols=35  Identities=23%  Similarity=0.208  Sum_probs=29.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEE-EEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNV-IICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~V-vi~~r~  113 (147)
                      ..|++++|.|+ +|+|...++.+...|+.+ ++++++
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~  194 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDIS  194 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEech
Confidence            47889999987 899999999988999875 567776

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=92.13  E-value=0.32  Score=38.71  Aligned_cols=52  Identities=23%  Similarity=0.286  Sum_probs=35.3

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .|+|-|+ +++|..+++.|++ ..+|.+.+++ +.+++..    +     .+.....|+.|.++
T Consensus        18 kilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~----~-----~~~~~~~d~~d~~~   70 (365)
T 3abi_A           18 KVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK----E-----FATPLKVDASNFDK   70 (365)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT----T-----TSEEEECCTTCHHH
T ss_pred             EEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh----c-----cCCcEEEecCCHHH
Confidence            4677788 9999999998865 5799999998 5444321    1     12334567766554

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=92.13  E-value=0.19  Score=38.56  Aligned_cols=37  Identities=16%  Similarity=0.263  Sum_probs=29.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      |+.+|  |.+.+|..++..|++.|++|++.+|+ +..++.
T Consensus         3 ~I~ii--G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~   40 (287)
T 3pdu_A            3 TYGFL--GLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPL   40 (287)
T ss_dssp             CEEEE--CCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHH
T ss_pred             eEEEE--ccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH
Confidence            45555  46899999999999999999999999 555443

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=92.11  E-value=0.33  Score=38.91  Aligned_cols=36  Identities=31%  Similarity=0.416  Sum_probs=29.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      .+.|-|+ +.+|.+++..|++.|.+|.+.+|+ +..++
T Consensus        31 kI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~   67 (356)
T 3k96_A           31 PIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDE   67 (356)
T ss_dssp             CEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHH
T ss_pred             eEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence            3555565 899999999999999999999998 44433

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=92.11  E-value=0.41  Score=37.65  Aligned_cols=45  Identities=22%  Similarity=0.422  Sum_probs=35.0

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCC--CEEEEeecC-hhHHHHHHHHHH
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      ...+.|.|+ +.+|..++..|+..|  .+|++.|++ +.++....++..
T Consensus         6 ~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~   53 (317)
T 3d0o_A            6 GNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKH   53 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHh
Confidence            346788898 999999999999887  489999999 556554555543

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=92.08  E-value=0.3  Score=38.42  Aligned_cols=42  Identities=17%  Similarity=0.295  Sum_probs=33.9

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCC--CEEEEeecChhHHHHHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSERVDSAVQSLR  124 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~~~~~~~~~~l~  124 (147)
                      .+.|+|+++.+|..++..|+..|  .+|++.|+++ .+....+|.
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~-~~~~a~dL~   45 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAADLS   45 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS-HHHHHHHHT
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc-cHHHHHHHh
Confidence            57899999999999999999888  6899999985 334444553

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=91.96  E-value=0.42  Score=38.20  Aligned_cols=45  Identities=16%  Similarity=0.247  Sum_probs=37.2

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCC--EEEEeecC-hhHHHHHHHHHH
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga--~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      .+.+.|.|+ +.+|..++..|+..|.  +|++.|++ +.++....+|..
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~   68 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEH   68 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhh
Confidence            457888898 9999999999999886  89999999 666666666654

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=91.96  E-value=0.42  Score=37.13  Aligned_cols=37  Identities=27%  Similarity=0.384  Sum_probs=29.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      .+-|-| .+.+|..++..|++.|.+|++.+|+ +..++.
T Consensus        23 ~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l   60 (310)
T 3doj_A           23 EVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDEL   60 (310)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHH
T ss_pred             EEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            444445 5899999999999999999999999 555443

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=91.87  E-value=0.19  Score=40.15  Aligned_cols=45  Identities=20%  Similarity=0.363  Sum_probs=35.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCC--E-----EEEeecCh---hHHHHHHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGD--N-----VIICSRSE---RVDSAVQSLRE  125 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga--~-----Vvi~~r~~---~~~~~~~~l~~  125 (147)
                      ..+.||||++.||..++..|+..|.  +     |++.|+++   .++....+|..
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~   58 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQD   58 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHh
Confidence            3689999999999999999998774  4     89999972   45555666654

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=91.86  E-value=0.34  Score=37.69  Aligned_cols=42  Identities=19%  Similarity=0.396  Sum_probs=34.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCC--CEEEEeecC-hhHHHHHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRS-ERVDSAVQSLR  124 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~-~~~~~~~~~l~  124 (147)
                      .+.|.| ++.+|..++..|+..|  .+|++.|++ +.++....++.
T Consensus         3 kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~   47 (309)
T 1hyh_A            3 KIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQ   47 (309)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHH
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHH
Confidence            567778 7999999999999999  789999999 66666555543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	147
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	3e-13
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-12
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	5e-12
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-11
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-11
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-11
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	2e-11
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-11
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-11
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	3e-11
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	3e-11
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	4e-11
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	4e-11
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	4e-11
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	4e-11
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	4e-11
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	4e-11
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	5e-11
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	5e-11
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	5e-11
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	5e-11
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	6e-11
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	9e-11
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-10
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	1e-10
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	1e-10
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	2e-10
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	2e-10
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-10
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	2e-10
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-10
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	2e-10
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	2e-10
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-10
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	3e-10
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	3e-10
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	3e-10
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-10
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	3e-10
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	3e-10
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	4e-10
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	5e-10
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	5e-10
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-10
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	6e-10
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	7e-10
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	7e-10
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	7e-10
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	1e-09
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	1e-09
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-09
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-09
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-09
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	2e-09
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	2e-09
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	2e-09
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-09
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-09
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	3e-09
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	4e-09
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	4e-09
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-09
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	9e-09
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	2e-08
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	2e-08
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	7e-08
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	2e-07
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	1e-05
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	2e-05
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	2e-05
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	5e-05
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	6e-05
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	7e-05
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	1e-04
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-04
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	3e-04
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	4e-04
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	7e-04
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	8e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	9e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	0.001
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.001
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	0.001
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	0.001
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	0.002
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	0.002
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	0.002
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	0.002
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.002
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	0.002
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	0.002
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.003
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.003
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	0.004

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 62.8 bits (152), Expect = 3e-13
 Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 6/67 (8%)

Query: 74  REPMLPPY-----NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEF 127
           ++ MLPP         ITG   G+G  +       G   +I SR  + + +  + +  + 
Sbjct: 14  QKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT 73

Query: 128 GEQHVCV 134
           G +   +
Sbjct: 74  GNKVHAI 80

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 60.1 bits (145), Expect = 2e-12
 Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCV 134
            L+TG ++G+G+ +A+   +AG +V++ SR+ E    A Q L E++G + +  
Sbjct: 8   ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAF 60

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (143), Expect = 5e-12
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHV 132
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 8   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 67

Query: 133 CVTWQHS 139
            +     
Sbjct: 68  YIAGTME 74

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 58.5 bits (141), Expect = 1e-11
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
            L+TG   G+G  + K  L  G  V     +E   +A Q L  E GE+ + V
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINE---AAGQQLAAELGERSMFV 57

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 58.5 bits (140), Expect = 1e-11
 Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 82  NVLITG--STKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQH 138
             LI G  + K I Y +A+     G  +     +E ++  V+ + +E    +V      
Sbjct: 7   KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVS 65

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 57.8 bits (139), Expect = 2e-11
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 13/66 (19%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSER-------------VDSAVQSLREEFG 128
            VL+  +++GIG A+A    + G  V IC+R+E              +   +  L E+  
Sbjct: 6   GVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVK 65

Query: 129 EQHVCV 134
           E  + V
Sbjct: 66  EVDILV 71

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 57.8 bits (139), Expect = 2e-11
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCV 134
            +++TG  +GIG A  +    AG NV +  RS        + + +EFG +    
Sbjct: 11  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAY 64

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 57.4 bits (138), Expect = 2e-11
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCV 134
            L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE   E     
Sbjct: 5   ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT 57

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 57.3 bits (138), Expect = 3e-11
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVT 135
            L+TG ++GIGY + +E    G +V  CSR+ + ++  +   R +  +    V 
Sbjct: 11  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVC 64

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 57.1 bits (137), Expect = 3e-11
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
            LITGS +GIG A A+ +++ G  V I   +     A ++   E G     +
Sbjct: 8   ALITGSARGIGRAFAEAYVREGARVAIADINL---EAARATAAEIGPAACAI 56

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 57.0 bits (137), Expect = 3e-11
 Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCV 134
            +ITG+  GIG  +A  F  AG +V++   + +  +  V  +++  G+   C 
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACR 66

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 57.1 bits (137), Expect = 4e-11
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSLREEFGEQHVCV 134
            L+TG +KGIGYA+ +E    G  V  CSR+E  +D  ++  RE+       V
Sbjct: 9   ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSV 61

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (137), Expect = 4e-11
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQH 131
            ++TG   GIG A+ KE L+ G NV+I SR  ER+ SA   L+       
Sbjct: 15  AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTK 64

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 57.0 bits (137), Expect = 4e-11
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
           VLITG   G+G AL   F+  G  V +  +S      +  L  + G+  + +
Sbjct: 8   VLITGGASGLGRALVDRFVAEGAKVAVLDKSA---ERLAELETDHGDNVLGI 56

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 56.7 bits (136), Expect = 4e-11
 Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE--RVDSAVQSLREEFGEQHVCV 134
            ++TGST GIG  +A      G ++++    +   ++     L  + G + +  
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 56.7 bits (136), Expect = 4e-11
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCV 134
            L+TG+   IG A A    + G  + +   + E ++ A  S+RE+  E    V
Sbjct: 8   CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV 60

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.5 bits (136), Expect = 4e-11
 Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVT 135
           VLITG+  GIG   A EF K    +++   +   ++      +    + H  V 
Sbjct: 10  VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVV 63

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 56.5 bits (136), Expect = 5e-11
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQ 137
            +ITGS+ GIG A A  F + G  V I  R  ER++   Q +      +    +  
Sbjct: 8   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 63

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 56.6 bits (136), Expect = 5e-11
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQ 137
           V+ITGS+ GIG + A  F K G  V I  R+ +R++   Q + +            
Sbjct: 7   VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 62

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.5 bits (136), Expect = 5e-11
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHV 132
            L+TG+ +GIG A A+  L  G  V +   + E       +L E+F  Q  
Sbjct: 6   ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKT 56

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 56.5 bits (136), Expect = 5e-11
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQ 137
            V+ITGS+ GIG   A  F + G NV I  RS ER++   Q + +    +    +  
Sbjct: 7   TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 63

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 56.4 bits (135), Expect = 6e-11
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCV 134
            L+TG+ +GIG A+A   +K G  V I   +     +    + +  G      
Sbjct: 4   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVK 56

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (134), Expect = 9e-11
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
           V++TG  +GIG  + + F+ +G  V+IC + E   S  ++L +E       +
Sbjct: 9   VVVTGGGRGIGAGIVRAFVNSGARVVICDKDE---SGGRALEQELPGAVFIL 57

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 55.4 bits (133), Expect = 1e-10
 Identities = 8/50 (16%), Positives = 17/50 (34%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHV 132
            ++T      G   A    +AG  V     S +    +++  E + +   
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKP 52

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 55.4 bits (133), Expect = 1e-10
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSE-RVDSAVQSLREEFGEQHVCVT 135
            VL+TG TKGIG+A+ +EF   G  +  C+R+E  ++  +   +++  +    V 
Sbjct: 10  TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVC 64

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 55.0 bits (132), Expect = 1e-10
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCV 134
            L+TG+ +GIG  +AK   K+  +VI  SR+ +  DS V  ++    E     
Sbjct: 13  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA 65

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 55.1 bits (132), Expect = 2e-10
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHV 132
           VLITG   G+G A A      G  + +   S E ++++  ++ E   +  V
Sbjct: 7   VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEV 57

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 55.1 bits (132), Expect = 2e-10
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCV 134
           V+ITGS+ G+G ++A  F      V++  RS  +  +S ++ +++  GE     
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 54.8 bits (131), Expect = 2e-10
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHS 139
            L+TG+++GIG A+A+     G  VI  + SE   +  Q++ +  G     +    +
Sbjct: 7   ALVTGASRGIGRAIAETLAARGAKVIGTATSE---NGAQAISDYLGANGKGLMLNVT 60

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 55.1 bits (132), Expect = 2e-10
 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 3/55 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQ 137
            +ITG   GIG   AK F++ G  V+I   ++      Q +    G   V     
Sbjct: 9   AIITGGAGGIGETTAKLFVRYGAKVVIADIAD---DHGQKVCNNIGSPDVISFVH 60

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.9 bits (132), Expect = 2e-10
 Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHV 132
            L+TG++ GIG A+A+  ++ G  V+ C+R+   ++      +       +
Sbjct: 13  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTL 63

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 54.7 bits (131), Expect = 2e-10
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
            +L+TG+  GIG A    F + G +++   R ER    +         + + V
Sbjct: 7   TILVTGAASGIGRAALDLFAREGASLVAVDREER---LLAEAVAALEAEAIAV 56

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 54.6 bits (130), Expect = 2e-10
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-DNVIICSRSERVDSAVQSLREEFGEQHVCVTWQH 138
           VL+TG T G+G  +A+   + G  ++++ SRS         L  E        T   
Sbjct: 12  VLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 54.7 bits (131), Expect = 2e-10
 Identities = 9/53 (16%), Positives = 21/53 (39%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
           NV+   +  GIG   ++E +K      +        +A+  L+    + ++  
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITF 59

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 3e-10
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQH 138
           +++T + +GIG A A  F + G  VI    +E   S +Q L +  G Q   +    
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINE---SKLQELEKYPGIQTRVLDVTK 61

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 54.5 bits (130), Expect = 3e-10
 Identities = 11/59 (18%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 82  NVLITG--STKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQH 138
            +L+TG  S   I Y +A+   + G  +    +++++   V+    + G   V      
Sbjct: 7   RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVA 65

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 54.1 bits (130), Expect = 3e-10
 Identities = 14/46 (30%), Positives = 23/46 (50%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEF 127
            VL+TG  +GIG A+A+ F + G  V +C          +++   F
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAF 52

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 54.3 bits (130), Expect = 3e-10
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAA 141
            VLITG+  GIG A  + F K G  ++ C   E     ++   E  G   V +     A+
Sbjct: 7   AVLITGAAHGIGRATLELFAKEGARLVACDIEE---GPLREAAEAVGAHPVVMDVADPAS 63

Query: 142 LSRHYA 147
           + R +A
Sbjct: 64  VERGFA 69

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 54.1 bits (130), Expect = 3e-10
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
            +ITG   GIG A+A+ F   G ++ I           ++     G + + V
Sbjct: 8   AVITGGANGIGRAIAERFAVEGADIAIADLVP--APEAEAAIRNLGRRVLTV 57

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 3e-10
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKA-GDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTW 136
            L+TG  KGIG A+ ++  +    +V++ +R   R  +AVQ L+ E          
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLD 61

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 53.9 bits (129), Expect = 4e-10
 Identities = 8/52 (15%), Positives = 21/52 (40%), Gaps = 3/52 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
            L++G  +G+G +  +  +  G  V+     +      +++  E  +    V
Sbjct: 9   ALVSGGARGMGASHVRAMVAEGAKVVFGDILD---EEGKAMAAELADAARYV 57

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (128), Expect = 5e-10
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
            VL+TG+ KGIG    +     G  V+  SR++   + + SL  E        
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ---ADLDSLVRECPGIEPVC 58

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 53.8 bits (129), Expect = 5e-10
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCV 134
            V+ITG  +G+G   A++ + AG  V++       D    +   E G+     
Sbjct: 7   TVIITGGARGLGAEAARQAVAAGARVVLADVL---DEEGAATARELGDAARYQ 56

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 53.5 bits (127), Expect = 6e-10
 Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHS 139
            L+TG+ K +G ++A+     G  V +         ++   +L        + V    S
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 53.6 bits (127), Expect = 6e-10
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 3/55 (5%)

Query: 82  NVLITGSTKGIGYALAKEFL---KAGDNVIICSRSERVDSAVQSLREEFGEQHVC 133
           ++LITG  +G+G  L K  L   +   ++    R+      ++ L +     H+ 
Sbjct: 4   SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHIL 58

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 53.3 bits (127), Expect = 7e-10
 Identities = 12/57 (21%), Positives = 27/57 (47%), Gaps = 5/57 (8%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSERVDSAVQSLREEFGEQHVCV 134
           P +V++TG+ +GIG  L ++ +K  +  ++I  +R          L+     +   +
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDV---EKATELKSIKDSRVHVL 56

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 53.3 bits (127), Expect = 7e-10
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSER--VDSAVQSLREEFGEQHVCVTWQHSA 140
            +ITG  + IG+++A    + G  V++  R         V  L        V      S 
Sbjct: 4   AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 63

Query: 141 ALS 143
           + S
Sbjct: 64  SSS 66

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.1 bits (127), Expect = 7e-10
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 3/47 (6%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFG 128
             L+TG+ KGIG    K    +G  V+  +R+    S + SL +E  
Sbjct: 7   RALVTGAGKGIGRDTVKALHASGAKVVAVTRTN---SDLVSLAKECP 50

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 52.7 bits (126), Expect = 1e-09
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQH 138
            +ITG T GIG A+A +F++ G  V+I  R        +   +  G       +QH
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHS---DVGEKAAKSVGTPDQIQFFQH 61

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 52.8 bits (126), Expect = 1e-09
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCV 134
            L+TG+ +GIG  +A E  + G  VI+   +  E  +  V ++++   +     
Sbjct: 21  ALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 74

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 52.2 bits (124), Expect = 1e-09
 Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 2/59 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAA 141
           ++I+G   GIG A  K    AG  ++     +     +  L    G +          +
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRD--AEVIADLSTAEGRKQAIADVLAKCS 60

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 52.2 bits (124), Expect = 2e-09
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSE 114
            V++ G    +G A+ + F K G  V+    S 
Sbjct: 4   KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSA 36

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.2 bits (124), Expect = 2e-09
 Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 3/56 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQH 138
            +ITG   G+G A A+  +  G + ++        S  ++  ++ G   V      
Sbjct: 8   AVITGGASGLGLATAERLVGQGASAVLLDLPN---SGGEAQAKKLGNNCVFAPADV 60

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.5 bits (125), Expect = 2e-09
 Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 83  VLITGSTKGIGYALAKEFLK---AGDNVIICSRS-ERVDSAVQSLREEFGEQHV 132
            ++TG+++G G ALA +  +    G  +++ +RS   +    + L  +  +  V
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 52.5 bits (124), Expect = 2e-09
 Identities = 6/59 (10%), Positives = 22/59 (37%), Gaps = 4/59 (6%)

Query: 82  NVLITG--STKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQH 138
            +L++G  +   I + +A+   + G  +++          +Q + +    +   +    
Sbjct: 8   RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR--LRLIQRITDRLPAKAPLLELDV 64

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 52.4 bits (124), Expect = 2e-09
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 83  VLITG--STKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSA 140
             I G     G G+A+AK    AG  +++ +    ++    SLR    +Q   +      
Sbjct: 11  AFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLM 70

Query: 141 ALSRHYA 147
            + + Y 
Sbjct: 71  EIKKVYP 77

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 52.1 bits (124), Expect = 2e-09
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSERVDSAVQSLREEFGEQHVCV 134
            L TG+ +GIG  +A E  + G +V++    S +    V +  ++ G Q V +
Sbjct: 9   ALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAI 61

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 51.7 bits (123), Expect = 2e-09
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 17/74 (22%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSER-----------------VDSAVQSLR 124
           +VL+TG  +GIG A+A+     G  V +  R                    VD A  ++ 
Sbjct: 9   SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVE 68

Query: 125 EEFGEQHVCVTWQH 138
           E  G   V V+   
Sbjct: 69  EHQGPVEVLVSNAG 82

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 51.5 bits (123), Expect = 3e-09
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 6/63 (9%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE------RVDSAVQSLREEFGEQHVCVTW 136
           VL+TG+  G+G A A  F + G  V++           +  SA   + EE   +      
Sbjct: 10  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 69

Query: 137 QHS 139
            + 
Sbjct: 70  NYD 72

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 50.8 bits (120), Expect = 4e-09
 Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 1/57 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQH 138
           V + G T  +G  LA      G  +++ SR  E+ ++     R   G+  +      
Sbjct: 3   VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNE 59

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 51.4 bits (122), Expect = 4e-09
 Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 82  NVLITG--STKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHS 139
             L+ G  + + +G+A+A +  +AG  V +  ++ER+    + L E  G   +       
Sbjct: 10  KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQ 69

Query: 140 AA 141
             
Sbjct: 70  DE 71

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 50.9 bits (121), Expect = 5e-09
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSERVDSAVQSLREEFGEQHVCV 134
           V++TG+++GIG A+A    KAG  V++  +RS +    V    E +G Q +  
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITF 56

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 50.2 bits (119), Expect = 9e-09
 Identities = 7/38 (18%), Positives = 13/38 (34%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSA 119
            VL+ G    +G    + F      V      E  +++
Sbjct: 4   RVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS 41

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 49.0 bits (116), Expect = 2e-08
 Identities = 9/38 (23%), Positives = 15/38 (39%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAV 120
            L+TG   G+G A A      G  V++       +  +
Sbjct: 4   ALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLI 41

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 49.0 bits (116), Expect = 2e-08
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 8/60 (13%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDN-------VIICSRS-ERVDSAVQSLREEFGEQHVCV 134
           +LITG+ KGIG A+A EF +A  +       +++ SR+   ++      R E        
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 7e-08
 Identities = 13/44 (29%), Positives = 15/44 (34%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREE 126
           VLITG + GIG  LA               + R       L E 
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEA 48

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 46.4 bits (108), Expect = 2e-07
 Identities = 10/46 (21%), Positives = 18/46 (39%), Gaps = 2/46 (4%)

Query: 83  VLITG--STKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREE 126
             I G   T G G+ +AKE  K    +I        +  +++ +  
Sbjct: 5   CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNG 50

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (95), Expect = 1e-05
 Identities = 9/65 (13%), Positives = 18/65 (27%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAA 141
            + I G+T   G     + ++AG  V +  R      +            V         
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKT 64

Query: 142 LSRHY 146
           ++   
Sbjct: 65  VAGQD 69

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 41.2 bits (95), Expect = 2e-05
 Identities = 10/61 (16%), Positives = 21/61 (34%), Gaps = 1/61 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAA 141
            + + G+T   G +L +     G +V     S +   A + L+             ++  
Sbjct: 5   TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA-EELQAIPNVTLFQGPLLNNVP 63

Query: 142 L 142
           L
Sbjct: 64  L 64

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 40.2 bits (93), Expect = 2e-05
 Identities = 9/58 (15%), Positives = 21/58 (36%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSA 140
           V I G    +G A+ ++  + GD  ++    + ++        +F           +A
Sbjct: 5   VFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAA 62

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 39.4 bits (90), Expect = 5e-05
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREE 126
           VL+TG+   +   + ++ L+ G  V   +RS    + +Q   + 
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDA 57

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 39.4 bits (90), Expect = 6e-05
 Identities = 11/54 (20%), Positives = 19/54 (35%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTW 136
           +L+ G+T  IG  +AK  L  G    +  R     S  +  +     +      
Sbjct: 6   ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANI 59

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 39.4 bits (90), Expect = 7e-05
 Identities = 10/32 (31%), Positives = 13/32 (40%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSE 114
           VLI G T  IG  +    +  G    +  R E
Sbjct: 6   VLIVGGTGYIGKRIVNASISLGHPTYVLFRPE 37

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 38.3 bits (87), Expect = 1e-04
 Identities = 13/60 (21%), Positives = 19/60 (31%), Gaps = 3/60 (5%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSE---RVDSAVQSLREEFGEQHVCVTWQH 138
            +LITG+   +G  + K+       VI     +       AV     E     V     H
Sbjct: 3   KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAH 62

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 37.6 bits (86), Expect = 2e-04
 Identities = 15/51 (29%), Positives = 23/51 (45%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHV 132
            VL+TG +  IG     + L+ G +VII         +V  + E  G +H 
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHP 52

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.2 bits (85), Expect = 3e-04
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 68  SSSSVKREPMLPPYN--VLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLRE 125
           +   ++RE   P  N  + ITG+   I   +A+     G  VI     +          +
Sbjct: 1   TYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCD 60

Query: 126 EF 127
           EF
Sbjct: 61  EF 62

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.7 bits (83), Expect = 4e-04
 Identities = 10/58 (17%), Positives = 21/58 (36%), Gaps = 2/58 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII--CSRSERVDSAVQSLREEFGEQHVCVTWQH 138
           VL+TG++   G  + K+  +  D  +     RS +    +    + F          +
Sbjct: 6   VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSIN 63

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.2 bits (82), Expect = 7e-04
 Identities = 11/31 (35%), Positives = 12/31 (38%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSR 112
             LITG T   G  L +  L  G  V    R
Sbjct: 3   IALITGITGQDGSYLTEFLLGKGYEVHGLIR 33

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.1 bits (82), Expect = 8e-04
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 71  SVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVII 109
            +++E    P   LITG    IG  L +  LK    V+ 
Sbjct: 7   ELRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVG 45

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 36.0 bits (81), Expect = 9e-04
 Identities = 9/33 (27%), Positives = 12/33 (36%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSE 114
            V +TG T   G  L+      G  V   S + 
Sbjct: 10  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTA 42

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 35.8 bits (81), Expect = 0.001
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSR 112
            L+TG T   G  LAK  L+ G  V     
Sbjct: 3   ALVTGITGQDGAYLAKLLLEKGYRVHGLVA 32

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 35.5 bits (81), Expect = 0.001
 Identities = 10/44 (22%), Positives = 20/44 (45%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLRE 125
            +LITG    IG A+ +  +K   + ++          ++SL +
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSD 45

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 35.7 bits (80), Expect = 0.001
 Identities = 10/48 (20%), Positives = 16/48 (33%), Gaps = 2/48 (4%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIIC--SRSERVDSAVQSLREEF 127
            VLI G    IG  L +  L+     +      S+ +   +      F
Sbjct: 2   RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHF 49

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 35.2 bits (80), Expect = 0.001
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSR 112
            LITG T   G  LA+  L+ G  V    R
Sbjct: 4   ALITGVTGQDGSYLAEFLLEKGYEVHGIKR 33

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 35.1 bits (79), Expect = 0.002
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII 109
           +LITG    +G  LA   L  G ++I+
Sbjct: 3   LLITGGCGFLGSNLASFALSQGIDLIV 29

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 34.7 bits (78), Expect = 0.002
 Identities = 8/36 (22%), Positives = 14/36 (38%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSER 115
           P  VL+ G+T   G  L    L       + + + +
Sbjct: 2   PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK 37

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 34.9 bits (78), Expect = 0.002
 Identities = 8/35 (22%), Positives = 17/35 (48%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERV 116
           N+L+ G T  +G+ L +     G+ + +   S+  
Sbjct: 2   NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEF 36

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.9 bits (78), Expect = 0.002
 Identities = 8/27 (29%), Positives = 11/27 (40%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII 109
           V++ G     G+A A    K    V I
Sbjct: 4   VMVIGGDGYCGWATALHLSKKNYEVCI 30

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (79), Expect = 0.002
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII 109
           VL+TG    IG     E L+AG   ++
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVV 31

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.6 bits (78), Expect = 0.002
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII 109
           VL+TG    IG     E ++ G + ++
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDCVV 30

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (79), Expect = 0.002
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSR 112
            +LITG    +G  L  + +  G  V +   
Sbjct: 3   RILITGGAGFVGSHLTDKLMMDGHEVTVVDN 33

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 34.6 bits (78), Expect = 0.003
 Identities = 6/31 (19%), Positives = 11/31 (35%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSR 112
           N+++TG    IG            +V +   
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVL 34

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 34.4 bits (78), Expect = 0.003
 Identities = 8/45 (17%), Positives = 15/45 (33%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREE 126
            +L+TG    IG    ++ L      +       +DS   +    
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRA 46

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 34.2 bits (76), Expect = 0.004
 Identities = 7/28 (25%), Positives = 12/28 (42%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC 110
           +++TG    IG  + K     G   I+ 
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILV 29

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	147
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.56
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.55
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.54
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.53
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.53
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.51
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.51
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.5
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.5
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.5
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.5
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.5
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.5
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.49
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.49
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.49
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.48
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.47
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.47
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.47
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.46
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.45
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.43
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.43
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.43
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.43
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.42
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.42
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.42
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.42
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.4
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.4
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.39
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.38
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.38
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.37
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.37
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.37
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.34
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.34
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.34
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.34
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.32
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.32
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.31
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.28
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.25
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.22
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.18
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.17
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.16
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.15
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.14
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.13
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.11
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.1
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.1
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.09
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.02
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	98.96
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	98.88
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	98.78
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	98.77
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	98.73
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	98.65
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.51
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	98.48
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	98.45
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	98.44
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	98.27
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	98.23
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	98.15
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	98.07
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	98.02
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.02
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	97.96
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.96
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	97.95
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	97.93
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	97.93
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.85
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	97.82
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.76
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	97.73
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	97.69
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.48
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.41
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	97.35
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	97.34
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	97.29
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	97.25
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	97.22
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	97.16
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.05
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	97.03
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	97.01
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.0
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.0
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.94
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.94
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	96.92
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	96.85
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	96.85
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.84
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.8
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	96.76
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.67
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.66
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.61
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	96.61
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.6
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.53
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.47
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.44
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.42
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.4
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.39
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.36
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.31
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	96.16
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.15
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.1
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.03
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	95.97
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	95.96
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	95.92
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	95.88
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.78
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	95.71
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.68
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.53
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	95.48
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.44
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.41
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	95.31
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.26
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	95.24
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.23
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	95.17
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.13
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.1
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.09
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.09
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	95.06
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.97
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	94.88
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	94.77
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	94.71
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.64
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	94.56
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	94.54
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	94.33
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.21
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	94.12
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	94.12
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	94.06
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	94.0
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	93.98
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	93.92
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	93.82
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	93.82
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	93.78
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	93.66
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	93.63
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.59
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	93.45
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	93.36
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.34
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	93.33
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.3
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.24
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	93.23
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.15
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	93.14
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	93.01
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	92.94
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.68
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	92.63
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.62
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	92.6
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.6
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	92.33
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	92.18
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	92.15
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	91.97
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	91.95
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	91.76
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	91.65
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	91.6
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	91.46
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	91.33
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.27
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.26
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.24
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	91.18
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	90.89
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	90.66
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	90.63
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	90.53
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	90.41
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	90.38
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.26
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	89.93
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	89.88
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	89.7
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	89.64
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	89.64
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	89.62
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	89.35
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	89.26
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	89.19
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	89.13
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	89.11
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	89.08
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	89.01
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	89.0
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	88.98
d2afhe1	289	Nitrogenase iron protein {Azotobacter vinelandii [	88.97
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	88.96
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	88.86
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	88.37
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	88.19
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	87.95
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	87.89
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	87.88
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	87.87
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	87.67
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	87.29
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	87.19
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	86.87
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	86.67
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	86.35
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	86.18
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	86.12
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	86.02
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	85.73
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	85.61
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	85.17
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	85.01
d1ihua1	296	Arsenite-translocating ATPase ArsA {Escherichia co	84.71
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	84.54
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	84.25
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	83.7
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	83.59
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	83.31
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	83.07
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	82.84
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	82.71
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	82.6
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	82.3
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	81.43
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	81.38
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	81.28
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	81.2
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	81.08
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	80.84
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	80.76
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	80.69
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	80.3

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=6.2e-15  Score=113.08  Aligned_cols=71  Identities=17%  Similarity=0.199  Sum_probs=64.1

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |.+|+||+++||||++|||+++|+.|+++|++|++++|+ ++++++.+++.+......+.+..+|+++.+++
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v   76 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDI   76 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHH
Confidence            445999999999999999999999999999999999999 88999999998876556788889999998865

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.55  E-value=1.5e-14  Score=112.03  Aligned_cols=75  Identities=15%  Similarity=0.222  Sum_probs=65.3

Q ss_pred             CCCCCCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           70 SSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        70 ~~~~~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+.+.++|+||+++||||++|||+++|++|+++|++|++++|+ +++++..+++.++.+. .+.++.+|+++.+++
T Consensus        15 ~~~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~-~~~~~~~D~~~~~~v   90 (294)
T d1w6ua_          15 KAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQCDVRDPDMV   90 (294)
T ss_dssp             SCCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECCTTCHHHH
T ss_pred             ccCCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCC-ceEEEEecccChHHH
Confidence            33555678999999999999999999999999999999999999 8889999999887654 567788999988764

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.54  E-value=1.5e-14  Score=110.58  Aligned_cols=69  Identities=26%  Similarity=0.419  Sum_probs=61.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++|+||+++||||++|||+++|+.|+++|++|++++|+ ++++++.+++.+..+. .+.++.+|+++.++.
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~-~~~~~~~Dv~~~~~v   70 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSNYEEV   70 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCC-cEEEEEccCCCHHHH
Confidence            47899999999999999999999999999999999999 8889999998877665 467778999998764

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.53  E-value=1.6e-14  Score=110.89  Aligned_cols=69  Identities=22%  Similarity=0.259  Sum_probs=62.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .|+||+++||||++|||+++|+.|+++|++|++++|+ +.++++.+++.+..+...+.+..+|++|.++.
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v   70 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQV   70 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHH
Confidence            4789999999999999999999999999999999999 88888888888776666788899999998764

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.53  E-value=1.7e-14  Score=110.74  Aligned_cols=69  Identities=26%  Similarity=0.458  Sum_probs=61.0

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++|+||+++||||++|||+++|+.|+++|++|++++|+ ++++++.+++.+. + ..+.+..+|+++.++.
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~-g-~~~~~~~~Dv~~~~~v   72 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-G-FKVEASVCDLSSRSER   72 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-T-CEEEEEECCTTCHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-C-CCceEEEeeCCCHHHH
Confidence            468999999999999999999999999999999999999 8899999988765 3 3567788999988764

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.51  E-value=1.9e-14  Score=110.28  Aligned_cols=69  Identities=22%  Similarity=0.306  Sum_probs=61.6

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++++||+++||||++|||+++|+.|+++|++|++++|+ +.+++..+++.++.+. .+.+..+|+++.+++
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~-~~~~~~~Dv~~~~~v   74 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGV-KTKAYQCDVSNTDIV   74 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTC-CEEEEECCTTCHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCC-ceEEEEccCCCHHHH
Confidence            46899999999999999999999999999999999999 8888888888777665 467788999998764

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.51  E-value=2.4e-14  Score=109.40  Aligned_cols=70  Identities=24%  Similarity=0.209  Sum_probs=61.6

Q ss_pred             CCCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        74 ~~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+.|++|+++||||++|||+++|+.|+++|++|++++|+ +.++++.+++.+. +. .+.+..+|+++.+++
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~-g~-~~~~~~~Dvt~~~~v   74 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF-GY-ESSGYAGDVSKKEEI   74 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT-TC-CEEEEECCTTCHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHH
Confidence            3678999999999999999999999999999999999999 8889999888654 33 577888999998764

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=2.1e-14  Score=109.79  Aligned_cols=68  Identities=25%  Similarity=0.305  Sum_probs=61.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+||+++||||++|||+++|+.|+++|++|++++|+ +.++++.+++.+..+...+.+..+|+++.+++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v   69 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQL   69 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHH
Confidence            379999999999999999999999999999999999 88888888887766666788999999998764

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=2.2e-14  Score=109.96  Aligned_cols=69  Identities=20%  Similarity=0.304  Sum_probs=60.6

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+.|+||+++||||++|||+++|+.|+++|++|++++|+ +.++++.+++.+. +. .+.+..+|+++.++.
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~-g~-~~~~~~~Dvs~~~~~   75 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GG-QAFACRCDITSEQEL   75 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc-CC-cEEEEEccCCCHHHH
Confidence            346899999999999999999999999999999999999 8899999999765 33 467788999998764

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=4.2e-14  Score=107.87  Aligned_cols=68  Identities=21%  Similarity=0.229  Sum_probs=60.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++.||+++||||++|||+++|++|+++|++|++++|+ ++++++.+++.+. + ..+.+..+|++|.++.
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~-~-~~~~~~~~Dvs~~~~v   71 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-G-AKVHTFVVDCSNREDI   71 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-T-CCEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-C-CcEEEEEeeCCCHHHH
Confidence            46999999999999999999999999999999999999 8899999998754 3 3578889999998764

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.50  E-value=4.1e-14  Score=108.64  Aligned_cols=69  Identities=25%  Similarity=0.338  Sum_probs=61.4

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .++|+||+++||||++|||+++|++|+++|++|++++|+ +.++++.+++.+..  ..+.+..+|+++.++.
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~--~~~~~~~~Dv~~~~~v   72 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG--FQVTGSVCDASLRPER   72 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEeccCCCHHHH
Confidence            568999999999999999999999999999999999999 88999999887653  3588889999988754

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.50  E-value=3e-14  Score=109.87  Aligned_cols=69  Identities=30%  Similarity=0.376  Sum_probs=61.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHh-CCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEF-GEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~-~~~~v~~~~~Dvs~~~~~  145 (147)
                      .|+||+++||||++|||+++|+.|+++|++|++++|+ +.++++.+++.+.. ....+.+..+|+++.++.
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v   72 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQ   72 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHH
Confidence            5899999999999999999999999999999999999 88999999987654 234688999999998764

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.50  E-value=3.1e-14  Score=108.71  Aligned_cols=69  Identities=19%  Similarity=0.268  Sum_probs=62.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHH---CCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLK---AGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~---~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .|+||++|||||++|||+++|+.|++   +|++|++++|+ +.++++.++|....+...+.+..+|+++.++.
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v   75 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGV   75 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHH
Confidence            58999999999999999999999996   79999999999 88999999998887666889999999998764

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.49  E-value=3.9e-14  Score=108.45  Aligned_cols=68  Identities=21%  Similarity=0.300  Sum_probs=59.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+||+++||||++|||+++|++|+++|++|++++|+  +.++++.+++.+..+. .+.+..+|++|.+++
T Consensus         1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~-~~~~~~~Dv~~~~~v   70 (260)
T d1x1ta1           1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV-KVLYDGADLSKGEAV   70 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTS-CEEEECCCTTSHHHH
T ss_pred             CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHH
Confidence            5899999999999999999999999999999999997  5677788888776554 577889999998764

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.49  E-value=5.9e-14  Score=107.65  Aligned_cols=68  Identities=31%  Similarity=0.465  Sum_probs=59.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++|+||+++||||++|||+++|+.|+++|++|++++|+ +.++++.+++.+. + ..+.+..+|+++.++.
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~-~-~~~~~~~~D~s~~~~~   70 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-G-LNVEGSVCDLLSRTER   70 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-T-CCEEEEECCTTCHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-C-CCceEEEeecCCHHHH
Confidence            57999999999999999999999999999999999999 8888888888654 3 3467788999998764

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.49  E-value=4.4e-14  Score=108.38  Aligned_cols=69  Identities=29%  Similarity=0.327  Sum_probs=61.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhC-CceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG-EQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~-~~~v~~~~~Dvs~~~~~  145 (147)
                      .|+||+++||||++|||+++|++|+++|++|++++|+ +.++++.+++.+... ...+.+..+|+++.++.
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v   72 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQ   72 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHH
Confidence            4899999999999999999999999999999999999 888999999977643 34688999999988764

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=8.7e-14  Score=108.82  Aligned_cols=71  Identities=31%  Similarity=0.432  Sum_probs=62.6

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhC---CceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG---EQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~---~~~v~~~~~Dvs~~~~~  145 (147)
                      ...|+||+++||||++|||+++|++|+++|++|++++|+ +.++++.++|.+...   ...+.++.+|++|.+++
T Consensus         7 ~g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v   81 (297)
T d1yxma1           7 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEV   81 (297)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHH
Confidence            357999999999999999999999999999999999999 888999999876542   34688889999998765

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.47  E-value=7.2e-14  Score=107.12  Aligned_cols=67  Identities=21%  Similarity=0.231  Sum_probs=59.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .|+||+++||||++|||+++|+.|+++|++|++++|+ +.++++.+++.+. + ..+.+..+|+++.++.
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~-g-~~~~~~~~Dv~~~~~v   69 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-G-VEARSYVCDVTSEEAV   69 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-T-SCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-C-CcEEEEEccCCCHHHH
Confidence            5899999999999999999999999999999999999 8888888888654 3 3477889999998764

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.47  E-value=8.3e-14  Score=106.43  Aligned_cols=65  Identities=28%  Similarity=0.432  Sum_probs=58.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|||++||||++|||+++|++|+++|++|++++|+ +.++++.+++.+. +. .+.+..+|++|.++.
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~-g~-~~~~~~~Dvs~~~~v   66 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-GV-EADGRTCDVRSVPEI   66 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CC-cEEEEEeecCCHHHH
Confidence            58999999999999999999999999999999999 8899999999654 33 578889999998764

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.47  E-value=8.5e-14  Score=107.45  Aligned_cols=69  Identities=26%  Similarity=0.350  Sum_probs=61.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCC-ceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE-QHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~-~~v~~~~~Dvs~~~~~  145 (147)
                      .|+||+++||||++|||+++|+.|+++|++|++++|+ +.++++.+++.+.... ..+.+..+|+++.+++
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v   71 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQ   71 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHH
Confidence            4789999999999999999999999999999999999 8899999999776432 4688999999998764

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.2e-13  Score=106.06  Aligned_cols=68  Identities=26%  Similarity=0.340  Sum_probs=59.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .+|+||+++||||++|||+++|+.|+++|++|++++|+ +.++++.+++....+ ..+....+|+++.+.
T Consensus        10 ~~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~-~~~~~~~~d~~~~~~   78 (269)
T d1xu9a_          10 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-ASAHYIAGTMEDMTF   78 (269)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-SEEEEEECCTTCHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhc-ccchhhhhhhhhHHH
Confidence            35999999999999999999999999999999999999 889998888876644 467778888887654

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.45  E-value=8.8e-14  Score=106.39  Aligned_cols=65  Identities=26%  Similarity=0.410  Sum_probs=56.0

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.|+||+++||||++|||+++|+.|+++|++|++++|+ +.++++.+++    +. .+.+..+|+++.++.
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~-~~~~~~~Dvt~~~~v   66 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI----GP-AACAIALDVTDQASI   66 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH----CT-TEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CC-ceEEEEeeCCCHHHH
Confidence            35899999999999999999999999999999999999 7777776665    33 467788999998764

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.43  E-value=1.6e-13  Score=105.40  Aligned_cols=67  Identities=25%  Similarity=0.342  Sum_probs=57.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-h-hHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-E-RVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~-~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+||+++||||++|||+++|++|+++|++|++++|+ + .++++.+++.+. +. .+.+..+|+++.+++
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-g~-~~~~~~~Dvt~~~~v   72 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-GG-EAIAVKGDVTVESDV   72 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TC-EEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHH
Confidence            5899999999999999999999999999999999998 4 567777777554 43 577889999998764

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.43  E-value=2.1e-13  Score=104.74  Aligned_cols=66  Identities=20%  Similarity=0.269  Sum_probs=57.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .|+||+++||||++|||+++|++|+++|++|+++||+ +.++++.+++...   ..+.+..+|++|.+++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~~~~~v   69 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP---DVISFVHCDVTKDEDV   69 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC---CceEEEEccCCCHHHH
Confidence            5899999999999999999999999999999999999 8888888887432   2366788999998764

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.43  E-value=2.3e-13  Score=104.55  Aligned_cols=69  Identities=22%  Similarity=0.351  Sum_probs=58.5

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..+|+||+++||||++|||+++|+.|+++|++|++++++  +.++++.+++.+. + ..+.+..+|+++.++.
T Consensus        13 ~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~-g-~~~~~~~~D~~~~~~v   83 (272)
T d1g0oa_          13 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-G-SDAACVKANVGVVEDI   83 (272)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-T-CCEEEEECCTTCHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh-C-CceeeEeCCCCCHHHH
Confidence            446999999999999999999999999999999999988  5667777777654 3 3578889999998764

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.43  E-value=2e-13  Score=103.77  Aligned_cols=64  Identities=20%  Similarity=0.199  Sum_probs=55.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+||+++||||++|||+++|+.|+++|++|++++|+ +.++++.+++..     ......+|+++.++.
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~-----~~~~~~~Dv~~~~~v   65 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGA-----NGKGLMLNVTDPASI   65 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG-----GEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-----CCcEEEEEecCHHHh
Confidence            5899999999999999999999999999999999999 777777766632     356778999988764

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.42  E-value=1.8e-13  Score=104.89  Aligned_cols=64  Identities=22%  Similarity=0.311  Sum_probs=55.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+||+++||||++|||+++|++|+++|++|++++|+ ++++++.+++    + ..+.+..+|+++.++.
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dv~~~~~v   66 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----G-DAARYQHLDVTIEEDW   66 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----G-GGEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----C-CceEEEEcccCCHHHH
Confidence            5899999999999999999999999999999999999 7777666554    2 3477889999988764

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.42  E-value=1.9e-13  Score=104.25  Aligned_cols=66  Identities=27%  Similarity=0.381  Sum_probs=57.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .|+||+++||||++|||+++|+.|+++|++|++++|+ +.++++.+++..   ...+.+..+|++|.++.
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v   69 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGW   69 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC---CCcEEEEEccCCCHHHH
Confidence            4899999999999999999999999999999999999 778877777742   23577889999998764

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.42  E-value=2.6e-13  Score=103.40  Aligned_cols=65  Identities=14%  Similarity=0.207  Sum_probs=55.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..|+||+++||||++|||+++|+.|+++|++|++++|+ ++++++.+++.     ....+..+|+++.++.
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v   67 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----DAARYVHLDVTQPAQW   67 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-----GGEEEEECCTTCHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-----CcceEEEeecCCHHHH
Confidence            46899999999999999999999999999999999999 77777666653     2466788999998764

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.42  E-value=3e-13  Score=104.42  Aligned_cols=65  Identities=29%  Similarity=0.396  Sum_probs=54.6

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.|+||+++||||++|||+++|+.|+++|++|++++|+ ++++++.+++    + ..+.+..+|+++.++.
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~----~-~~~~~~~~Dv~~~~~~   66 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH----G-DNVLGIVGDVRSLEDQ   66 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----G-GGEEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----C-CCeeEEecccccHHHH
Confidence            35899999999999999999999999999999999999 6666655443    3 3577888999988754

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.40  E-value=5.2e-13  Score=101.93  Aligned_cols=67  Identities=24%  Similarity=0.294  Sum_probs=56.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .|+||+++||||++|||+++|+.|+++|++|++++++  +.++++.+++.+. +. .+.++.+|++|.++.
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~D~~~~~~v   71 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL-GA-QGVAIQADISKPSEV   71 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TC-CEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc-CC-CceEecCCCCCHHHH
Confidence            5899999999999999999999999999999998766  5567777777554 33 567899999988764

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.40  E-value=2.8e-13  Score=102.93  Aligned_cols=64  Identities=19%  Similarity=0.238  Sum_probs=53.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ++|+||+++||||++|||+++|+.|+++|++|++++|+ ++++++.+++    +.  +....+|++|.+++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~--~~~~~~Dv~~~~~v   65 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PG--IEPVCVDLGDWDAT   65 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TT--CEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CC--CeEEEEeCCCHHHH
Confidence            36899999999999999999999999999999999999 6666555443    22  45678899988764

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.39  E-value=5.6e-13  Score=101.71  Aligned_cols=63  Identities=22%  Similarity=0.327  Sum_probs=55.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |+++||||++|||+++|++|+++|++|++++|+ +.++++.+++.+. +. .+.+..+|+++.+++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~-g~-~~~~~~~Dv~~~~~v   65 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA-GG-HAVAVKVDVSDRDQV   65 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-CEEEEECCTTSHHHH
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CC-cEEEEEeeCCCHHHH
Confidence            789999999999999999999999999999999 8889999998765 33 477788999998764

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.38  E-value=3.8e-13  Score=102.13  Aligned_cols=63  Identities=27%  Similarity=0.358  Sum_probs=52.5

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +.|+||+++||||++|||+++|+.|+++|++|++++|+ +.+++..+++    +   ..+..+|++|.+++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~----~---~~~~~~Dv~~~~~v   64 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV----G---AHPVVMDVADPASV   64 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----T---CEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----C---CeEEEEecCCHHHH
Confidence            35899999999999999999999999999999999999 6666655433    2   34678899988764

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=4.1e-13  Score=102.00  Aligned_cols=64  Identities=25%  Similarity=0.323  Sum_probs=53.5

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      ..|+||+++||||++|||+++|+.|+++|++|++++|+ ++++++.+++    +.  +....+|++|.+++
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~----~~--~~~~~~Dv~d~~~v   67 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----PG--IEPVCVDLGDWEAT   67 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TT--CEEEECCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc----CC--CeEEEEeCCCHHHH
Confidence            35899999999999999999999999999999999999 6666665544    22  45678899988764

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.37  E-value=5.8e-13  Score=101.01  Aligned_cols=64  Identities=22%  Similarity=0.317  Sum_probs=54.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .|+||+++||||++|||+++|+.|+++|++|++++|+ +.+++..+++    + ..+.+.++|+++.+++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dls~~~~i   66 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL----E-AEAIAVVADVSDPKAV   66 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC----C-SSEEEEECCTTSHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----C-CceEEEEecCCCHHHH
Confidence            5899999999999999999999999999999999999 6555544433    3 3567788999998765

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=5e-13  Score=102.05  Aligned_cols=63  Identities=21%  Similarity=0.347  Sum_probs=52.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .|+||+++||||++|||+++|+.|+++|++|++++|+ +.++++.+++    +  ...+..+|++|.+++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~--~~~~~~~Dvs~~~~v   66 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----P--GAVFILCDVTQEDDV   66 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----T--TEEEEECCTTSHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----C--CCeEEEccCCCHHHH
Confidence            5899999999999999999999999999999999999 5555544433    3  256788999988764

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.37  E-value=7.4e-13  Score=101.15  Aligned_cols=64  Identities=20%  Similarity=0.285  Sum_probs=54.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .|+||+++||||++|||+++|+.|+++|++|++++|+ +.++++.+++    +. ...+..+|+++.++.
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~----~~-~~~~~~~Dv~~~~~~   67 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----GE-RSMFVRHDVSSEADW   67 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CT-TEEEECCCTTCHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CC-CeEEEEeecCCHHHH
Confidence            5899999999999999999999999999999999999 7777766655    33 456778899987654

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.34  E-value=1.2e-12  Score=99.91  Aligned_cols=67  Identities=15%  Similarity=0.183  Sum_probs=55.0

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEecccc-chh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSA-ALS  143 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs-~~~  143 (147)
                      ++|+||+++||||++|||+++|+.|+++|++|++++|+ +..++ .+++....+...+.+..+|++ +.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~   69 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTA-LAELKAINPKVNITFHTYDVTVPVA   69 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHH-HHHHHHHCTTSEEEEEECCTTSCHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHH-HHHHHhhCCCCCEEEEEeecCCCHH
Confidence            36899999999999999999999999999999999888 55443 456666666667888888887 443

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.34  E-value=1.5e-12  Score=98.94  Aligned_cols=66  Identities=23%  Similarity=0.308  Sum_probs=52.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .|+||+++||||++|||+++|+.|+++|++|++++|++. ++..+++ +..+ ..+.+..+|++|.++.
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~-~~~~~~~-~~~g-~~~~~~~~Dvs~~~~v   67 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA-PEAEAAI-RNLG-RRVLTVKCDVSQPGDV   67 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC-HHHHHHH-HHTT-CCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCch-HHHHHHH-HHcC-CcEEEEEeeCCCHHHH
Confidence            489999999999999999999999999999999999821 2222333 3334 3577889999998764

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.34  E-value=2.4e-12  Score=94.22  Aligned_cols=66  Identities=18%  Similarity=0.290  Sum_probs=55.0

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      ..+++||+++||||++|||+++++.|+++|++|++++|+ +++++..+++........   ..+|+++.+
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~d~~~~~   84 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNV---TAAETADDA   84 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCC---EEEECCSHH
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhh---hhhhcccHH
Confidence            457999999999999999999999999999999999999 888888888877655433   344554443

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.34  E-value=2e-12  Score=98.24  Aligned_cols=67  Identities=22%  Similarity=0.360  Sum_probs=54.7

Q ss_pred             CCCCCeEEEeCCCC--hHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~--GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+||+++||||++  |||+++|++|+++|++|++++|+++..+..+++....+.  ..++.+|+++.++.
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~v   73 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGG--ALLFRADVTQDEEL   73 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTC--CEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCc--ccccccccCCHHHH
Confidence            68999999999876  999999999999999999999996655556666555443  45678999988654

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=1.6e-12  Score=99.82  Aligned_cols=63  Identities=27%  Similarity=0.352  Sum_probs=55.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHC-CCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKA-GDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~-Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|++||||++|||+++|++|+++ |++|++++|+ ++++++.++|.++.+  .+.+..+|++|.+++
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dvs~~~sv   68 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL--SPRFHQLDIDDLQSI   68 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC--CCEEEECCTTCHHHH
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEEecCCHHHH
Confidence            57799999999999999999986 8999999999 899999999977643  467789999998875

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=2.8e-12  Score=96.69  Aligned_cols=62  Identities=15%  Similarity=0.251  Sum_probs=50.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      +|+||+++||||++|||+++|++|+++|++|++++|+ +.+++..+++..     ......+|+.+.+
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~~~~   64 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGN-----NCVFAPADVTSEK   64 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCT-----TEEEEECCTTCHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC-----Ccccccccccccc
Confidence            5899999999999999999999999999999999999 777777766632     3455556665543

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.31  E-value=2.5e-12  Score=97.91  Aligned_cols=62  Identities=23%  Similarity=0.407  Sum_probs=50.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|+||+++||||++|||+++|+.|+++|++|++++|+++..+..+++    +.   .++.+|++|.++.
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~----~~---~~~~~Dv~~~~~v   63 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAI----GG---AFFQVDLEDERER   63 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHH----TC---EEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc----CC---eEEEEeCCCHHHH
Confidence            58999999999999999999999999999999999994444444333    32   3567899988764

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.28  E-value=3.9e-12  Score=96.92  Aligned_cols=66  Identities=18%  Similarity=0.279  Sum_probs=55.0

Q ss_pred             CCCCCeEEEeCCCC--hHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           77 MLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        77 ~l~gkv~vVTG~s~--GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .|+||+++||||++  |||+++|++|+++|++|++++|++++++.++++.++.+.  ..+..+|+++.++
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~--~~~~~~d~~~~~~   69 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNS--PYVYELDVSKEEH   69 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEECCTTCHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCc--eeEeeecccchhh
Confidence            58999999999764  999999999999999999999997777778888776443  4567788887654

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.25  E-value=1.1e-11  Score=94.06  Aligned_cols=63  Identities=21%  Similarity=0.267  Sum_probs=52.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|++||||++|||+++|++|+++|++|++.+++  +.++++.+++.+. +. .+.+..+|++|.+++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~Dv~~~~~v   66 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-GG-QAITFGGDVSKEADV   66 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-TC-EEEEEECCTTSHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-CC-cEEEEeCCCCCHHHH
Confidence            599999999999999999999999999998765  6677777777654 43 567888999998764

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.22  E-value=9.1e-12  Score=94.27  Aligned_cols=63  Identities=29%  Similarity=0.403  Sum_probs=54.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCE-------EEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDN-------VIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~-------Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      +|++||||++|||+++|+.|+++|++       |++++|+ +.++++.+++.+. + ..+.+..+|++|.++.
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~-g-~~~~~~~~Dvt~~~~v   72 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-G-ALTDTITADISDMADV   72 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT-T-CEEEEEECCTTSHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEEecCCCHHHH
Confidence            47899999999999999999999997       8999999 8889998888664 3 3577889999998764

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=1.1e-11  Score=93.99  Aligned_cols=61  Identities=20%  Similarity=0.243  Sum_probs=48.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      ..|+||+++||||++|||+++++.|+++|++|++++|+ +++++    +.+..   .+....+|+.+.+
T Consensus         2 ~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~----~~~~~---~~~~~~~d~~~~~   63 (245)
T d2ag5a1           2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE----LEKYP---GIQTRVLDVTKKK   63 (245)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGG----GGGST---TEEEEECCTTCHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHhcc---CCceeeeeccccc
Confidence            45999999999999999999999999999999999999 54443    32322   2556777776554

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.17  E-value=3.4e-11  Score=90.77  Aligned_cols=65  Identities=18%  Similarity=0.359  Sum_probs=51.0

Q ss_pred             CCCCCeEEEeCCCC--hHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           77 MLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        77 ~l~gkv~vVTG~s~--GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      .|+||+++||||++  |||+++|+.|+++|++|++++|++++++..+++....+.  .....+|+.+..
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~   68 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGS--DIVLQCDVAEDA   68 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEECCTTCHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCC--cceeecccchHH
Confidence            58999999999998  899999999999999999999996555666666555443  344555666544

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.16  E-value=1.3e-11  Score=93.24  Aligned_cols=38  Identities=34%  Similarity=0.639  Sum_probs=36.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +.|+||+++||||++|||+++|+.|+++|++|++++|+
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~   40 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG   40 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            46899999999999999999999999999999999997

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.15  E-value=6.9e-11  Score=92.27  Aligned_cols=67  Identities=22%  Similarity=0.291  Sum_probs=50.2

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC----------hhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS----------ERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~----------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      .++|+||+++||||++|||+++|+.|+++|++|+++|++          +.+++..+++....  .....+..|..+.+
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~   78 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG--GKAVANYDSVEAGE   78 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT--CEEEEECCCGGGHH
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcc--cccccccchHHHHH
Confidence            356999999999999999999999999999999999764          34566666665542  23444445554443

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.14  E-value=2.2e-11  Score=92.03  Aligned_cols=63  Identities=22%  Similarity=0.398  Sum_probs=50.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC--EEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga--~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |+.|+|+||||++|||+++|++|+++|+  +|++.+|+ ++++++    .+. ....+.+..+|+++.+++
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l----~~~-~~~~~~~~~~Dvs~~~~v   66 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL----KSI-KDSRVHVLPLTVTCDKSL   66 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH----HTC-CCTTEEEEECCTTCHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHH----HHh-hCCceEEEEEecCCHHHH
Confidence            3569999999999999999999999996  68888999 655543    333 234588899999988764

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.13  E-value=4.7e-11  Score=90.25  Aligned_cols=65  Identities=12%  Similarity=0.221  Sum_probs=50.5

Q ss_pred             CCCCCCeEEEeC--CCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           76 PMLPPYNVLITG--STKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        76 ~~l~gkv~vVTG--~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .+|+||+++|||  +++|||+++|++|+++|++|++++|+ +++.   +++.+..+. ......+|+++.++
T Consensus         2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~---~~~~~~~~~-~~~~~~~dv~~~~~   69 (268)
T d2h7ma1           2 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLI---QRITDRLPA-KAPLLELDVQNEEH   69 (268)
T ss_dssp             CTTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHH---HHHHTTSSS-CCCEEECCTTCHHH
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHH---HHHHHHcCC-ceeeEeeecccccc
Confidence            468999999999  56899999999999999999999998 5443   334344333 45567889988754

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.11  E-value=1.4e-10  Score=87.28  Aligned_cols=58  Identities=21%  Similarity=0.253  Sum_probs=46.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-h-hHHHHHHHHHHHhCCceEEEEeccc
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-E-RVDSAVQSLREEFGEQHVCVTWQHS  139 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~-~~~~~~~~l~~~~~~~~v~~~~~Dv  139 (147)
                      .|+|||||++|||+++|++|+++|++|++++|+ + ..+++.+++.+..+... .....|+
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   61 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSA-VLCKGDL   61 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCE-EEEECCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCce-EEEeccc
Confidence            589999999999999999999999999999999 4 45667788877755544 4443333

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.10  E-value=8.8e-11  Score=88.58  Aligned_cols=63  Identities=19%  Similarity=0.345  Sum_probs=50.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHH---HCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFL---KAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La---~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .|+++||||++|||+++|+.|+   +.|++|++++|+ +.++++. ++.+..+  .+.+..+|++|.+++
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~-~~~~~~~--~~~~~~~Dvs~~~~v   68 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKNHS--NIHILEIDLRNFDAY   68 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHHHHCT--TEEEEECCTTCGGGH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HHHhcCC--cEEEEEEEeccHHHH
Confidence            4899999999999999999996   579999999999 6666544 4544432  577889999998764

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.10  E-value=1.4e-10  Score=87.62  Aligned_cols=65  Identities=26%  Similarity=0.381  Sum_probs=53.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC----hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS----ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~----~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .+++++||||++|||+++|+.|+++|+ +|++++|+    +.+++..+++.+. + ..+.+..+|++|.++.
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-g-~~v~~~~~Dv~d~~~~   77 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL-G-ARTTVAACDVTDRESV   77 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT-T-CEEEEEECCTTCHHHH
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc-c-ccccccccccchHHHH
Confidence            346999999999999999999999998 58889886    4566677777543 3 4688999999998764

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.09  E-value=1.5e-10  Score=87.93  Aligned_cols=57  Identities=16%  Similarity=0.207  Sum_probs=46.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEecc
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQH  138 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~D  138 (147)
                      .|++||||++|||+++|++|+++|++|++++++  +.++++.+++.+..+.. .....+|
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~d   61 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNS-AITVQAD   61 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTC-EEEEECC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCc-eEEEEee
Confidence            589999999999999999999999999999887  66777788887765543 4444444

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.02  E-value=2.1e-10  Score=86.04  Aligned_cols=36  Identities=33%  Similarity=0.636  Sum_probs=35.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |+||+++||||++|||+++|+.|+++|++|++++|+
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~   37 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARN   37 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            789999999999999999999999999999999999

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=3.8e-10  Score=87.05  Aligned_cols=66  Identities=18%  Similarity=0.115  Sum_probs=47.2

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEe---ecC-hhHHHHHHHHHHH-hCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIIC---SRS-ERVDSAVQSLREE-FGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~---~r~-~~~~~~~~~l~~~-~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .||++||||++|||+++|+.|+++|++|+++   .++ +..+++.+...+. .....+.+..+|++|.+++
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~   72 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSV   72 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHH
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhh
Confidence            4789999999999999999999999986554   444 3333333222221 1234688999999998765

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.88  E-value=1.6e-09  Score=82.74  Aligned_cols=44  Identities=23%  Similarity=0.379  Sum_probs=38.1

Q ss_pred             CCCCCCCeEEEeCCCC--hHHHHHHHHHHHCCCEEEEeecChhHHH
Q 032098           75 EPMLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSERVDS  118 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~--GIG~~~a~~La~~Ga~Vvi~~r~~~~~~  118 (147)
                      ..+|+||+++|||+++  |||+++|++|+++|++|++++|++....
T Consensus         3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~   48 (297)
T d1d7oa_           3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNI   48 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhh
Confidence            3579999999999875  9999999999999999999999843333

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.78  E-value=2.7e-09  Score=78.94  Aligned_cols=34  Identities=26%  Similarity=0.402  Sum_probs=32.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .|+++||||++|||+++|+.|+++|++|++++|+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~   34 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLR   34 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            4899999999999999999999999999999998

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.77  E-value=2.2e-09  Score=81.13  Aligned_cols=39  Identities=21%  Similarity=0.190  Sum_probs=35.0

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAV  120 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~  120 (147)
                      +++||||++|||+++|++|+++|++|++++|+ +.++++.
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~   41 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE   41 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            68999999999999999999999999999999 6655543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.73  E-value=5.7e-09  Score=77.90  Aligned_cols=34  Identities=26%  Similarity=0.343  Sum_probs=32.6

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .||++||||++|||+++|++|+++|++|+++||+
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~   34 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIR   34 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            3899999999999999999999999999999987

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.65  E-value=1.4e-08  Score=75.82  Aligned_cols=35  Identities=17%  Similarity=0.123  Sum_probs=33.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +||+++||||++|||+++++.|+++|++|+++|++
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~   35 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVV   35 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            58999999999999999999999999999998775

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.51  E-value=2e-07  Score=65.04  Aligned_cols=47  Identities=26%  Similarity=0.468  Sum_probs=40.9

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCC
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGE  129 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~  129 (147)
                      +.|+||+++||.++|+.|++.|++|++.+|+ ++++++.+++......
T Consensus         3 i~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~   50 (212)
T d1jaya_           3 VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGD   50 (212)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSS
T ss_pred             EEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC
Confidence            4566777899999999999999999999999 8888998888876544

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=98.48  E-value=5.7e-07  Score=69.51  Aligned_cols=68  Identities=13%  Similarity=0.148  Sum_probs=50.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .-+||.|+||||+|-||..+++.|+++|++|+.+.|+ +...................+...|+.+.++
T Consensus         8 ~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~   76 (342)
T d1y1pa1           8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGA   76 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTT
T ss_pred             CCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhh
Confidence            3469999999999999999999999999999999998 5544443333233333445556678876654

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.45  E-value=1.6e-07  Score=73.19  Aligned_cols=36  Identities=28%  Similarity=0.395  Sum_probs=33.0

Q ss_pred             CCCeEEEeC--CCChHHHHHHHHHHHCCCEEEEeecCh
Q 032098           79 PPYNVLITG--STKGIGYALAKEFLKAGDNVIICSRSE  114 (147)
Q Consensus        79 ~gkv~vVTG--~s~GIG~~~a~~La~~Ga~Vvi~~r~~  114 (147)
                      .+||++|||  +++|||+++|+.|+++|++|+++++.+
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~   38 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCch
Confidence            379999999  558999999999999999999999983

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.44  E-value=8e-08  Score=71.32  Aligned_cols=33  Identities=27%  Similarity=0.349  Sum_probs=30.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +.|+||||++|||+++++.|+++|++|+++||+
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~   35 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLS   35 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            346999999999999999999999999999997

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=6.4e-07  Score=64.66  Aligned_cols=59  Identities=20%  Similarity=0.233  Sum_probs=44.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |..|.++||||+++||.+++.+|+++|++|.++.|+ +++.+        .....+.+...|+.|.++
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~--------~~~~~~~~~~gD~~d~~~   60 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS--------EGPRPAHVVVGDVLQAAD   60 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS--------SSCCCSEEEESCTTSHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc--------ccccccccccccccchhh
Confidence            356789999999999999999999999999999998 44321        112235566777777654

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=98.23  E-value=4e-07  Score=69.96  Aligned_cols=64  Identities=19%  Similarity=0.056  Sum_probs=48.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      ++||.|+||||+|-||..+++.|++.|++|++++|+ .......+...   ....+.+..+|++|.+.
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~---~~~~i~~~~~Dl~d~~~   70 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR---VADGMQSEIGDIRDQNK   70 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT---TTTTSEEEECCTTCHHH
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh---cccCCeEEEeeccChHh
Confidence            578999999999999999999999999999999998 33222222211   12246677788887654

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=98.15  E-value=1.5e-06  Score=67.61  Aligned_cols=64  Identities=27%  Similarity=0.211  Sum_probs=43.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-h-----hHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-E-----RVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~-----~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      .|+++||||+|-||..++++|++.|++|++++|. .     .++....+...  ....+.+...|++|.++.
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~   70 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHT--CNPKFHLHYGDLSDTSNL   70 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhh--cCCCeEEEEeecCCHHHH
Confidence            3899999999999999999999999999999986 2     12222221111  233578888899887654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.07  E-value=2.1e-06  Score=64.93  Aligned_cols=61  Identities=23%  Similarity=0.097  Sum_probs=45.5

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hh-HHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ER-VDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~-~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |.|+||||+|-||..++..|++.|++|+.++|. .. ...-.+++.   ....+.+...|+.|.+.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~---~~~~~~~~~~Dl~d~~~   63 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG---IEGDIQYEDGDMADACS   63 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT---CGGGEEEEECCTTCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc---ccCCcEEEEccccChHH
Confidence            789999999999999999999999999999987 21 112222221   22347788889887654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=98.02  E-value=2.8e-06  Score=63.21  Aligned_cols=62  Identities=23%  Similarity=0.174  Sum_probs=43.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-h--hHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-E--RVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~--~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      +.|+||||+|-||..++++|++.|++|+++.|+ .  ...+ .+.+... ....+.+...|+.+.+.
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~-~~~~~~~-~~~~v~~v~~d~~d~~~   68 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDK-VQMLLYF-KQLGAKLIEASLDDHQR   68 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHH-HHHHHHH-HTTTCEEECCCSSCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhH-HHHHhhh-ccCCcEEEEeecccchh
Confidence            358999999999999999999999999999997 1  2221 2222111 12235666778777654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.02  E-value=3.7e-06  Score=61.91  Aligned_cols=64  Identities=19%  Similarity=0.160  Sum_probs=44.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hh--HHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ER--VDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~--~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      -|.|+||||+|-||..++++|++.|++|++++|+ ..  ..+....+.... ...+.+...|+.+...
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~   69 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHAS   69 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc-cCCcEEEEeecccchh
Confidence            4679999999999999999999999999999997 21  111222222222 2234566677776654

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.96  E-value=1.5e-05  Score=62.13  Aligned_cols=64  Identities=14%  Similarity=0.160  Sum_probs=45.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-----------------hhHHHHHHHHHHHhCCceEEEEeccccch
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-----------------ERVDSAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-----------------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      |+.|+||||+|=||..++++|++.|++|+++|.-                 ....+....+....+ ..+.+...|+.|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTG-KSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHC-CCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcC-CCcEEEEccCCCH
Confidence            6889999999999999999999999999998721                 112233333333323 3567778888876


Q ss_pred             hh
Q 032098          143 SR  144 (147)
Q Consensus       143 ~~  144 (147)
                      +.
T Consensus        80 ~~   81 (393)
T d1i24a_          80 EF   81 (393)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.96  E-value=9.3e-06  Score=62.38  Aligned_cols=62  Identities=19%  Similarity=0.200  Sum_probs=43.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |+|+||||+|=||..++..|++.|++|+++|+-  ...+... ..... ....+.+...|+.|.+.
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~-~~~~~-~~~~v~~~~~Dl~d~~~   65 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVA-RLEVL-TKHHIPFYEVDLCDRKG   65 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHH-HHHHH-HTSCCCEEECCTTCHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHH-hHHhh-cccCCeEEEeecCCHHH
Confidence            799999999999999999999999999998764  2111111 11111 12245667778887664

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.95  E-value=4.4e-06  Score=63.50  Aligned_cols=63  Identities=21%  Similarity=0.148  Sum_probs=43.2

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-h-----hHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-E-----RVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~-----~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |+++||||+|-||..++..|++.|++|+.++|. .     .+....... .......+.+...|+.+.++
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Di~~~~~   70 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDP-HNVNKALMKLHYADLTDASS   70 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHH
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhh-hhccccceEEEEccccCHHH
Confidence            799999999999999999999999999999984 1     222111111 11123356677788877654

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.93  E-value=9.2e-06  Score=62.17  Aligned_cols=65  Identities=25%  Similarity=0.184  Sum_probs=44.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-----hhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-----ERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-----~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      .+-|+++||||+|-||..++.+|.+.|++|+++|+.     +..+.. ..+........+.+...|..|..
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~d~~   83 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEV-RSLVSEKQWSNFKFIQGDIRNLD   83 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHH-HHHSCHHHHTTEEEEECCTTSHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHH-HHhhhhcccCCeeEEeecccccc
Confidence            456899999999999999999999999999999874     122222 12211111224667777777654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=97.93  E-value=1.4e-05  Score=61.35  Aligned_cols=60  Identities=15%  Similarity=0.093  Sum_probs=45.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      +.|+|+||||++.||..++.+|+++|++|+++.|+ ....  ..++...   ..+.+...|+.|..
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~--~~~~~~~---~~v~~~~gD~~d~~   62 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQAI---PNVTLFQGPLLNNV   62 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHTS---TTEEEEESCCTTCH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhh--hhhhccc---CCCEEEEeeCCCcH
Confidence            46899999999999999999999999999999998 4322  1223221   23567777877654

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=1.5e-05  Score=60.98  Aligned_cols=64  Identities=19%  Similarity=0.158  Sum_probs=45.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-------hhHHHHHHHHHHHhCCceEEEEeccccchhhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-------ERVDSAVQSLREEFGEQHVCVTWQHSAALSRH  145 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-------~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~~  145 (147)
                      |.|+||||+|=||.++++.|++.|.+|+++|+.       ....+..+.+... ....+.+...|+.|.+..
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l   73 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL-TGRSVEFEEMDILDQGAL   73 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH-HTCCCEEEECCTTCHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh-cCCCcEEEEeeccccccc
Confidence            678999999999999999999999999998741       1112222222222 233567888898887653

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=1e-05  Score=61.73  Aligned_cols=63  Identities=22%  Similarity=0.181  Sum_probs=42.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-h-----hHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-E-----RVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~-----~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      |+++||||+|-||..++.+|.+.|++|+.++|. .     .++......... ....+.+...|+.|.+.
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~   70 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDSTC   70 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHH
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhh-ccCCcEEEEeecCCchh
Confidence            455999999999999999999999999999986 2     122222222111 12357788888887654

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=97.76  E-value=1.4e-05  Score=61.24  Aligned_cols=62  Identities=23%  Similarity=0.275  Sum_probs=43.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .++||||+|-||..++..|++.|++|+++||- .........+... ....+.+..+|+.|.+.
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~   64 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEAL   64 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH-HTSCCEEEECCTTCHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh-cCCCCEEEEeecCCHHH
Confidence            49999999999999999999999999999874 1111112222221 12356777889888764

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=97.73  E-value=4.7e-05  Score=57.16  Aligned_cols=60  Identities=18%  Similarity=0.167  Sum_probs=43.2

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .|+||||+|-||..+++.|+++|++|+++|+-  ....+....+..   ...+.+...|+.+.+.
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~---~~~~~~i~~Di~~~~~   63 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKND   63 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc---cCCcEEEEcccCCHHH
Confidence            48999999999999999999999999998753  222222333322   2346677788887654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.69  E-value=2.8e-05  Score=55.03  Aligned_cols=34  Identities=26%  Similarity=0.277  Sum_probs=29.1

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCE--EEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDN--VIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~--Vvi~~r~  113 (147)
                      .++|+||||+|.||..+++.|++.|++  |+...|+
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~   38 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRS   38 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCC
Confidence            468999999999999999999999976  4445666

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.48  E-value=5.8e-05  Score=51.92  Aligned_cols=40  Identities=20%  Similarity=0.228  Sum_probs=34.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHH
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAV  120 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~  120 (147)
                      +|.++|-|+ |.+|..+|+.|++.|++|++++|+ +.+++..
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~   42 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLS   42 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHH
Confidence            578888776 999999999999999999999999 6555443

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.41  E-value=0.00018  Score=44.65  Aligned_cols=45  Identities=24%  Similarity=0.371  Sum_probs=36.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHH
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSL  123 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l  123 (147)
                      ++..++|+|+++|+|....+.+...|++|+.+.++++-.+.++++
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~l   75 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSL   75 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHC
Confidence            577899999999999999998889999999888873333444443

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=9e-05  Score=53.92  Aligned_cols=38  Identities=29%  Similarity=0.379  Sum_probs=34.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCC--EEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga--~Vvi~~r~  113 (147)
                      +.+++|.|+||||+|-||..++++|++.|.  +|+++.|+
T Consensus        10 ~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~   49 (232)
T d2bkaa1          10 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRR   49 (232)
T ss_dssp             HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESS
T ss_pred             hCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecC
Confidence            346789999999999999999999999995  79999997

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.34  E-value=0.00023  Score=54.46  Aligned_cols=37  Identities=22%  Similarity=0.223  Sum_probs=33.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +.++..|+||||+|=||..++..|.++|.+|+++|+.
T Consensus        12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~   48 (363)
T d2c5aa1          12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWK   48 (363)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCC
Confidence            4567789999999999999999999999999999876

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=97.29  E-value=3.3e-05  Score=59.12  Aligned_cols=63  Identities=16%  Similarity=0.102  Sum_probs=40.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .|.|+||||+|=||..++..|++.|++|.++.++  .... ....+ .......+.+..+|+.|.+.
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~-~~~~~-~~~~~~~i~~~~~Di~d~~~   66 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAG-NKANL-EAILGDRVELVVGDIADAEL   66 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTC-CGGGT-GGGCSSSEEEEECCTTCHHH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccc-cHHHH-HHhhcCCeEEEEccCCCHHH
Confidence            4689999999999999999999999875444332  1000 00011 11123357778888887654

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=0.00017  Score=54.46  Aligned_cols=33  Identities=24%  Similarity=0.418  Sum_probs=31.0

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |.|+||||+|=||..++.+|++.|.+|+++++.
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~   34 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNF   34 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence            789999999999999999999999999998864

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=97.22  E-value=0.0002  Score=54.30  Aligned_cols=55  Identities=20%  Similarity=0.192  Sum_probs=40.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      .|+||||++-||..++++|+++| .+|+++|+. +...+..       ....+.+...|+++.+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-------~~~~~~~i~~Di~~~~   58 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHS   58 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-------cCCCeEEEECccCChH
Confidence            48999999999999999999999 589888876 3222111       1234677777876543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=97.16  E-value=7.2e-05  Score=57.96  Aligned_cols=62  Identities=16%  Similarity=0.258  Sum_probs=39.8

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEE-eecChhHHHHHHHHHHHhCCceEEEEeccccchhh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVII-CSRSERVDSAVQSLREEFGEQHVCVTWQHSAALSR  144 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi-~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~~  144 (147)
                      .|+||||+|-||..++++|++.|++|++ +|+...... .+.+........+.+...|++|...
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~   64 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN-LESLSDISESNRYNFEHADICDSAE   64 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC-GGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc-HHHHHhhhhcCCcEEEEccCCCHHH
Confidence            4899999999999999999999998554 554311000 1111111223456777778877654

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.05  E-value=0.00074  Score=47.27  Aligned_cols=35  Identities=17%  Similarity=0.186  Sum_probs=33.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +|.+++|+|+++|+|...++-....|++|+.++++
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~   63 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGS   63 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCC
Confidence            58899999999999999999999999999999888

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=97.03  E-value=0.00053  Score=51.11  Aligned_cols=34  Identities=21%  Similarity=0.369  Sum_probs=30.7

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      -|.|+||||+|-||..++++|++.|..|++++..
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~   35 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR   35 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc
Confidence            3679999999999999999999999998887665

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=97.01  E-value=0.00067  Score=49.39  Aligned_cols=32  Identities=25%  Similarity=0.370  Sum_probs=30.4

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .++||||+|-||..++.+|..+|++|+.++|+
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~   34 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQ   34 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeech
Confidence            38999999999999999999999999999987

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.001  Score=46.13  Aligned_cols=35  Identities=20%  Similarity=0.295  Sum_probs=32.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +|.+++|+|+++++|...++.....|++|++++++
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~   62 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGT   62 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccc
Confidence            57899999999999999999988999999998887

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.00  E-value=0.00072  Score=46.89  Aligned_cols=36  Identities=17%  Similarity=0.226  Sum_probs=33.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecCh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSE  114 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~  114 (147)
                      .|++++|+||++|+|...++.....|++|+++++++
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~   63 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTA   63 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccch
Confidence            578999999999999999999889999999999983

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.94  E-value=0.0012  Score=46.00  Aligned_cols=49  Identities=18%  Similarity=0.304  Sum_probs=41.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      ..++||.++|-|+ +|-+++++.+|.+.|++|.+..|+ +++++..+.+..
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~   63 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH   63 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGG
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhh
Confidence            3578999999987 899999999999999999999999 777776665543

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.94  E-value=0.0016  Score=45.74  Aligned_cols=43  Identities=19%  Similarity=0.204  Sum_probs=36.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSA  119 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~  119 (147)
                      .++++|.++|-|+ +|.+++++..|...|. ++++..|+ +.+++.
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~   58 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKA   58 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHH
Confidence            3689999999999 6999999999999997 58899998 555543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.92  E-value=0.0017  Score=49.85  Aligned_cols=63  Identities=16%  Similarity=0.271  Sum_probs=42.8

Q ss_pred             eEEEeCCCChHHHHHHHHHHH-CCCEEEEeec---------C-hhHHHHHHHHHHHh------CCceEEEEeccccchhh
Q 032098           82 NVLITGSTKGIGYALAKEFLK-AGDNVIICSR---------S-ERVDSAVQSLREEF------GEQHVCVTWQHSAALSR  144 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~-~Ga~Vvi~~r---------~-~~~~~~~~~l~~~~------~~~~v~~~~~Dvs~~~~  144 (147)
                      .|+||||+|=||..++++|++ .|++|+++|+         . +..+.....+....      ....+.+...|+.|.+.
T Consensus         4 KVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~   83 (383)
T d1gy8a_           4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDF   83 (383)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHH
Confidence            689999999999999999985 7899999874         1 22333333332211      12346677888887643

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.85  E-value=0.001  Score=46.27  Aligned_cols=36  Identities=19%  Similarity=0.245  Sum_probs=32.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      -+|++++|+|+++++|...++.....|++|+.++++
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~   61 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR   61 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCEEEEEeccccchhhhhhhhccccccccccccc
Confidence            367899999999999999999888999999998887

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.85  E-value=0.00056  Score=48.46  Aligned_cols=34  Identities=32%  Similarity=0.405  Sum_probs=29.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCC--EEEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga--~Vvi~~r~  113 (147)
                      .|.++||||++-||..++++|++.|.  +|++..|+
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~   37 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK   37 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCC
Confidence            37999999999999999999999997  56666665

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.84  E-value=0.003  Score=46.12  Aligned_cols=37  Identities=30%  Similarity=0.467  Sum_probs=31.9

Q ss_pred             CCCCCCeEEEeCC----------------CChHHHHHHHHHHHCCCEEEEeec
Q 032098           76 PMLPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSR  112 (147)
Q Consensus        76 ~~l~gkv~vVTG~----------------s~GIG~~~a~~La~~Ga~Vvi~~r  112 (147)
                      .+|+|+.++||+|                +|.+|.++|+++..+|++|.++.-
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g   54 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSG   54 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhc
Confidence            4789999999977                467999999999999999987643

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.80  E-value=0.0011  Score=46.81  Aligned_cols=38  Identities=21%  Similarity=0.323  Sum_probs=33.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhH
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERV  116 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~  116 (147)
                      .+..++|+||++|+|....+-....|++|+.+.++ ++.
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~   69 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH   69 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHH
Confidence            44589999999999999999888999999999888 443

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.76  E-value=0.001  Score=46.17  Aligned_cols=35  Identities=29%  Similarity=0.344  Sum_probs=32.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +|.+++|+||++++|...++.....|++|++++++
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~   59 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGS   59 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecc
Confidence            57899999999999999999888899999998887

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.67  E-value=0.0017  Score=45.65  Aligned_cols=44  Identities=23%  Similarity=0.166  Sum_probs=33.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLR  124 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~  124 (147)
                      .+++++||++|+|....+-.-..|++|+.+.++ +..++..+.+.
T Consensus        31 ~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~   75 (189)
T d1gu7a2          31 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK   75 (189)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH
T ss_pred             EEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhh
Confidence            366668999999999988887889999988777 55555554443

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.66  E-value=0.0011  Score=46.34  Aligned_cols=39  Identities=31%  Similarity=0.420  Sum_probs=33.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      ++..++|+||++|+|...++-....|++|+.+.++ ++.+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~   62 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAAD   62 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHH
Confidence            46679999999999999998888899999999998 5443

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.61  E-value=0.0016  Score=45.48  Aligned_cols=49  Identities=20%  Similarity=0.388  Sum_probs=41.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      ..+++|.++|-|+ +|.+++++..|.+.+.+|.++.|+ +++++..+.+..
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~   63 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP   63 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhh
Confidence            3578999999877 888999999999988999999999 777777776643

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=96.61  E-value=0.0028  Score=43.80  Aligned_cols=46  Identities=28%  Similarity=0.474  Sum_probs=38.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQSL  123 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~l  123 (147)
                      ++++|.++|-|+ +++|..+++.|...|+ +|.++.|+ +++++..+++
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~   68 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL   68 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh
Confidence            588999999998 9999999999999997 58899998 6666555443

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.60  E-value=0.0028  Score=41.94  Aligned_cols=36  Identities=22%  Similarity=0.529  Sum_probs=31.3

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      .++|.|+ +.+|+.+++.|.+.|.+|++++.+ +..++
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~   38 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKK   38 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhh
Confidence            5788898 999999999999999999999998 44443

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.53  E-value=0.0017  Score=45.77  Aligned_cols=36  Identities=28%  Similarity=0.298  Sum_probs=32.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      -+|.+++|+|+++|+|....+-....|++|+.+.++
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s   65 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGK   65 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCc
Confidence            357899999999999999999888999999999887

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.47  E-value=0.00075  Score=48.86  Aligned_cols=41  Identities=29%  Similarity=0.427  Sum_probs=35.8

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      .+++||+++|.| .+.+|..+|+.|.+.|++|++.|.+ +.+.
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~   64 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVA   64 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHH
Confidence            469999999998 4779999999999999999999988 4443

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.44  E-value=0.0022  Score=40.24  Aligned_cols=36  Identities=22%  Similarity=0.179  Sum_probs=32.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +++||.++|-|. +..|.++|+.|.+.|++|++.|.+
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~   37 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTR   37 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCC
Confidence            578999999988 667999999999999999999987

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.42  E-value=0.0046  Score=42.25  Aligned_cols=34  Identities=26%  Similarity=0.245  Sum_probs=30.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .|.+++|.| .++||...++.+...|++|++++++
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~   59 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARS   59 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchH
Confidence            456888887 5899999999999999999999998

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.40  E-value=0.0049  Score=42.84  Aligned_cols=50  Identities=28%  Similarity=0.483  Sum_probs=41.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFG  128 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~  128 (147)
                      +++||.++|-|+ +|.+++++.+|.+.| +|.|..|+ +++++..+++.....
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~   65 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLN   65 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhc
Confidence            588999999987 789999999998777 99999999 888888877765443

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.39  E-value=0.0035  Score=43.12  Aligned_cols=38  Identities=29%  Similarity=0.287  Sum_probs=32.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      .|.+++|.|+ +++|...++.+...|++|++++++ ++++
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~   65 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRE   65 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHH
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHH
Confidence            5778999886 899999998887889999999998 5544

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.36  E-value=0.0038  Score=43.37  Aligned_cols=34  Identities=26%  Similarity=0.256  Sum_probs=30.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      .|.+++|.|+ ++||...++.+...|+ +|++++++
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~   62 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGS   62 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESC
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccc
Confidence            5789999987 7999999999999998 79999998

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.31  E-value=0.0042  Score=40.11  Aligned_cols=36  Identities=22%  Similarity=0.329  Sum_probs=33.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +++||.++|.|+ +.+|..-++.|++.|++|++.+..
T Consensus         9 ~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~   44 (113)
T d1pjqa1           9 QLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALT   44 (113)
T ss_dssp             CCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESS
T ss_pred             EeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecc
Confidence            689999999999 559999999999999999998876

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=96.16  E-value=0.0024  Score=46.52  Aligned_cols=29  Identities=21%  Similarity=0.471  Sum_probs=26.4

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCC-EEEEee
Q 032098           83 VLITGSTKGIGYALAKEFLKAGD-NVIICS  111 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~  111 (147)
                      |+||||+|=||..++..|++.|. +|+++|
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d   31 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVD   31 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEE
Confidence            79999999999999999999996 587776

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.15  E-value=0.0079  Score=40.91  Aligned_cols=34  Identities=24%  Similarity=0.210  Sum_probs=30.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .|.+++|.|+ +++|...++.+...|++|++++++
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~   60 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDID   60 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecch
Confidence            4678999876 999999999888899999999998

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.10  E-value=0.0096  Score=42.12  Aligned_cols=42  Identities=14%  Similarity=0.322  Sum_probs=34.0

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSL  123 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l  123 (147)
                      |.+.|-|+ |-||..+|..++..|++|++.|++ +.+++..+.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i   47 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGI   47 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhH
Confidence            56777787 679999999999999999999999 6555544433

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.03  E-value=0.0021  Score=43.61  Aligned_cols=43  Identities=14%  Similarity=0.277  Sum_probs=35.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC--hhHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS--ERVDSAV  120 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~--~~~~~~~  120 (147)
                      .++||.++|.|| |.+|..-++.|++.|++|++++-.  +.+....
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~~~   54 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPDLHKSIIPKF   54 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEEECTTHHHHH
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHH
Confidence            589999999999 569999999999999999998654  4454443

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=95.97  E-value=0.011  Score=40.38  Aligned_cols=37  Identities=24%  Similarity=0.273  Sum_probs=31.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhH
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERV  116 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~  116 (147)
                      .|.+++|.|+ +|||...++.+...|+++++++++ ++.
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~   67 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR   67 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHH
Confidence            5778999886 899999998888899999999988 443

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.96  E-value=0.0099  Score=40.55  Aligned_cols=35  Identities=17%  Similarity=0.272  Sum_probs=31.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~  113 (147)
                      .|.+++|.|+++++|..+++.+...| .+|++++++
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~   62 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVR   62 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESS
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccc
Confidence            56789999999999999999888888 588889888

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=95.92  E-value=0.0077  Score=41.58  Aligned_cols=43  Identities=21%  Similarity=0.297  Sum_probs=34.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHH
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQS  122 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~  122 (147)
                      ++|.++|-|+ +|.+++++..|.+.|+ +|.+..|+ ++.++..+.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~   60 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAAL   60 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHh
Confidence            5677888877 8999999999999996 69999999 666655443

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.88  E-value=0.0036  Score=43.88  Aligned_cols=35  Identities=9%  Similarity=0.117  Sum_probs=28.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEE-eecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi-~~r~  113 (147)
                      ++++++|+||++|+|...++-.-..|+++++ ++..
T Consensus        30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~   65 (187)
T d1vj1a2          30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGT   65 (187)
T ss_dssp             SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESS
T ss_pred             CCCEEEEECCCchhhHHHHHHHHHcCCcceecccch
Confidence            3478999999999999999988889987555 4444

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.78  E-value=0.01  Score=39.87  Aligned_cols=37  Identities=19%  Similarity=0.218  Sum_probs=33.6

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ...-|.+.|-||.+-||..+++.|.+.|++|.+.|++
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~   42 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDRE   42 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTT
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccc
Confidence            3455789999999999999999999999999999998

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.71  E-value=0.016  Score=39.58  Aligned_cols=34  Identities=24%  Similarity=0.245  Sum_probs=29.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      .|.+++|.|+ +++|...++.+...|+ +|++++++
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~   60 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLS   60 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCC
Confidence            4568888886 9999999999999998 79999998

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.68  E-value=0.014  Score=40.60  Aligned_cols=37  Identities=22%  Similarity=0.287  Sum_probs=34.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .++.||+++|.|-+ -||+.+|+.+...|++|++.+.+
T Consensus        20 ~~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~d   56 (163)
T d1li4a1          20 VMIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEID   56 (163)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSC
T ss_pred             ceecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeecc
Confidence            46899999999985 79999999999999999999998

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.53  E-value=0.019  Score=39.77  Aligned_cols=39  Identities=18%  Similarity=0.342  Sum_probs=32.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~  117 (147)
                      -.|.+++|.|+ +|+|+..++.+...|+ +|+++|.+ ++++
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~   68 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFE   68 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHH
Confidence            35778999986 8999999999999994 79999998 5443

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=95.48  E-value=0.01  Score=38.91  Aligned_cols=36  Identities=22%  Similarity=0.400  Sum_probs=29.6

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      |..+|-|+ +-+|..+++.|.+.|.+|+++|.+ +..+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~   37 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVN   37 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHH
Confidence            44566666 799999999999999999999998 4433

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.44  E-value=0.022  Score=38.68  Aligned_cols=37  Identities=19%  Similarity=0.229  Sum_probs=31.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      |++-|-|+ +.+|.++|..|++.|++|.+.+|+ +..++
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~   39 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKE   39 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            66777787 899999999999999999999998 44433

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.41  E-value=0.015  Score=40.77  Aligned_cols=42  Identities=10%  Similarity=0.195  Sum_probs=33.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSL  123 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l  123 (147)
                      |.+-|-|+ |-||..+|..++..|.+|++.|++ +.+++..+.+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i   47 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEA   47 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhh
Confidence            35666777 679999999999999999999999 6655554443

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=95.31  E-value=0.0026  Score=47.60  Aligned_cols=27  Identities=22%  Similarity=0.378  Sum_probs=24.2

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEE
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVI  108 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vv  108 (147)
                      .|+||||+|-||..+++.|+++|.+|.
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~   28 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDV   28 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCcc
Confidence            489999999999999999999997543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.26  E-value=0.023  Score=38.27  Aligned_cols=37  Identities=27%  Similarity=0.294  Sum_probs=30.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhH
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERV  116 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~  116 (147)
                      .|.+++|.|+ ++||...++.+...|++|++++++ +++
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~   64 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKL   64 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHh
Confidence            4668888865 999999999999999999999988 443

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=95.24  E-value=0.028  Score=38.41  Aligned_cols=35  Identities=17%  Similarity=0.212  Sum_probs=30.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      -.|.+++|.|+ +|+|...+..+...|+ +|++++++
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~   62 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDIN   62 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCc
Confidence            35778999999 6899999999999985 78888888

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.23  E-value=0.02  Score=38.75  Aligned_cols=36  Identities=22%  Similarity=0.247  Sum_probs=29.6

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDS  118 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~  118 (147)
                      |+.+|  |.+-+|..+|+.|.+.|.+|++.||+ +..++
T Consensus         2 kI~iI--G~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~   38 (165)
T d2f1ka2           2 KIGVV--GLGLIGASLAGDLRRRGHYLIGVSRQQSTCEK   38 (165)
T ss_dssp             EEEEE--CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             EEEEE--eecHHHHHHHHHHHHCCCEEEEEECCchHHHH
Confidence            45566  55999999999999999999999998 44443

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=95.17  E-value=0.022  Score=39.35  Aligned_cols=34  Identities=15%  Similarity=0.116  Sum_probs=29.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      .|.+++|.|+ +|+|...++.+...|+ +|++++++
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~   61 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSR   61 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCC
T ss_pred             CCCEEEEEcC-Ccchhhhhhhhhcccccccccccch
Confidence            4667888876 8999999999989997 68899988

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.13  E-value=0.023  Score=39.20  Aligned_cols=39  Identities=18%  Similarity=0.322  Sum_probs=32.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVD  117 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~  117 (147)
                      -.|.+++|.|+ +|+|...++.+...|+ +|+++|++ ++++
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~   66 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFP   66 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHH
Confidence            45778999986 8999999999998886 68889988 4443

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.10  E-value=0.025  Score=38.83  Aligned_cols=40  Identities=15%  Similarity=0.213  Sum_probs=32.5

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQS  122 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~  122 (147)
                      |+.+|  |-+-+|..+++.|++.|++|.+.||+ ++.++..++
T Consensus         3 kIGvI--GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           3 DVGVV--GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             SEEEE--CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             EEEEE--eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            55566  67889999999999999999999999 665555443

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.09  E-value=0.025  Score=39.60  Aligned_cols=36  Identities=31%  Similarity=0.346  Sum_probs=29.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +-+.|.|+|-|| +=.|+.+|..|+++|.+|.+++++
T Consensus         3 ~~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           3 MHSQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            344556777777 667999999999999999999874

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.09  E-value=0.038  Score=40.35  Aligned_cols=45  Identities=22%  Similarity=0.327  Sum_probs=37.9

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHH
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAV  120 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~  120 (147)
                      ..+++||+++|-|- +.+|..+|+.|.+.|++|++.|.+ ..++...
T Consensus        34 ~~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~   79 (230)
T d1leha1          34 SDSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAV   79 (230)
T ss_dssp             SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHH
Confidence            34689999999987 789999999999999999999988 5554443

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=95.06  E-value=0.049  Score=36.76  Aligned_cols=46  Identities=17%  Similarity=0.366  Sum_probs=35.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCC--CEEEEeecC-hhHHHHHHHHHH
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      +.+.+.|-|+ +.+|..+|..|+..|  .+|++.|++ +.++....++..
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~   52 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLED   52 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhc
Confidence            3456667785 889999999999987  589999999 555555556653

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.97  E-value=0.031  Score=38.94  Aligned_cols=44  Identities=18%  Similarity=0.241  Sum_probs=38.6

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      .+++||.++|-|.+.=+|+.++..|...|+.|.+++.. ..+.+.
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~   77 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH   77 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHH
Confidence            36899999999999999999999999999999999887 555443

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.88  E-value=0.094  Score=35.25  Aligned_cols=47  Identities=11%  Similarity=0.245  Sum_probs=36.5

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCC--CEEEEeecC-hhHHHHHHHHHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      ..++.+.|.|+ +.+|..++..|+..|  .+|++.|++ +.++....+|..
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~   53 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNH   53 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhh
Confidence            34567777796 999999999999877  479999999 556666666654

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.77  E-value=0.072  Score=39.63  Aligned_cols=63  Identities=24%  Similarity=0.209  Sum_probs=44.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecChhHHHHHHHHHHHhCCceEEEEeccccch
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      .++||+|+--|++.|+   ++..+++.|+ +|+.++.++......+...+......+.+...|+.+.
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l   96 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEV   96 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHh
Confidence            3679999999999886   4566778896 6888998865555555444444445677777777654

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=94.71  E-value=0.062  Score=36.47  Aligned_cols=48  Identities=15%  Similarity=0.107  Sum_probs=35.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC-hhHHHHHHHHHH
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      +-+.+++.|-|+ +.+|..++..|+..| +++++.|.+ +.++....++..
T Consensus         4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~   53 (154)
T d1pzga1           4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSH   53 (154)
T ss_dssp             CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHH
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhh
Confidence            344567777787 999999999888877 689999998 555555555543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.64  E-value=0.031  Score=39.07  Aligned_cols=42  Identities=17%  Similarity=0.312  Sum_probs=37.8

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      .+++||.++|-|.+.=+|+.++..|+.+|+.|.+++.. ..+.
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            36899999999999999999999999999999999887 4443

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=94.56  E-value=0.042  Score=37.93  Aligned_cols=36  Identities=17%  Similarity=0.166  Sum_probs=29.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecCh
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSE  114 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~~  114 (147)
                      -.|.+++|.|+ +|||...++.+...|+ .|++.+.++
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~   63 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDING   63 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccch
Confidence            35678889875 9999999999999998 577888883

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.54  E-value=0.2  Score=34.12  Aligned_cols=47  Identities=19%  Similarity=0.393  Sum_probs=35.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCC--CEEEEeecC-hhHHHHHHHHHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      ++...+.|.|+ +.+|..+|..|+..|  .++++.|++ +.++....+|..
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~   66 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQH   66 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHH
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhC
Confidence            34445556685 999999999999887  379999999 666666667754

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=94.33  E-value=0.042  Score=37.22  Aligned_cols=44  Identities=18%  Similarity=0.215  Sum_probs=31.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCE-EEEeecChhHHHHHHHH
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSERVDSAVQSL  123 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~-Vvi~~r~~~~~~~~~~l  123 (147)
                      .|.+++|.|+ +|+|...++.+...|+. |+++++++...+..+++
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~l   72 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF   72 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHh
Confidence            5778999988 59999999999999964 66677664333334333

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.21  E-value=0.049  Score=37.99  Aligned_cols=39  Identities=15%  Similarity=0.157  Sum_probs=35.6

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+++||.++|-|.+.=+|+.++..|+++|+.|.+++.+
T Consensus        24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          24 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             cCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            347999999999999999999999999999999988754

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=94.12  E-value=0.14  Score=35.50  Aligned_cols=44  Identities=11%  Similarity=0.244  Sum_probs=30.8

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCC---C----EEEEeecC---hhHHHHHHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAG---D----NVIICSRS---ERVDSAVQSLRE  125 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~G---a----~Vvi~~r~---~~~~~~~~~l~~  125 (147)
                      .+.||||+++||..++..|+...   .    .+.+.|.+   +.++....++..
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d   79 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELED   79 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT
T ss_pred             EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcc
Confidence            69999999999999999999743   2    35556665   334444445543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.12  E-value=0.075  Score=37.23  Aligned_cols=35  Identities=26%  Similarity=0.282  Sum_probs=28.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      -.|.+++|.|+ +++|+..++.....|+ +|++++.+
T Consensus        24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~   59 (195)
T d1kola2          24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLN   59 (195)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeeccc
Confidence            35778999986 7999988888777786 78888888

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.06  E-value=0.046  Score=36.96  Aligned_cols=37  Identities=24%  Similarity=0.398  Sum_probs=29.6

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      |+.+|  |-+-+|..+|+.|++.|.+|++.||+ +..++.
T Consensus         2 kIgiI--GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~   39 (161)
T d1vpda2           2 KVGFI--GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADV   39 (161)
T ss_dssp             EEEEE--CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEE--ehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHH
Confidence            34444  55889999999999999999999999 554443

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=94.00  E-value=0.15  Score=34.16  Aligned_cols=45  Identities=18%  Similarity=0.371  Sum_probs=34.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCC--CEEEEeecC-hhHHHHHHHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRS-ERVDSAVQSLREE  126 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~-~~~~~~~~~l~~~  126 (147)
                      |.+.|.|+ +.+|..++..|+..|  .++++.|++ +.++....++...
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a   49 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDA   49 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhcc
Confidence            56777785 899999999999877  479999999 6566556666543

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=93.98  E-value=0.089  Score=34.96  Aligned_cols=56  Identities=14%  Similarity=0.106  Sum_probs=39.3

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccch
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      .++|.|. +.+|..+++.|.+.|.+|++++.+ +...+..+++...    .+.+...|.++.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~----~~~vi~Gd~~d~   61 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD----NADVIPGDSNDS   61 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT----TCEEEESCTTSH
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcC----CcEEEEccCcch
Confidence            4778887 699999999999999999999988 5444444444321    234445555554

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=93.92  E-value=0.024  Score=41.18  Aligned_cols=35  Identities=14%  Similarity=0.224  Sum_probs=30.0

Q ss_pred             CCCeEEEeCCCChHHHHH-----HHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYAL-----AKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~-----a~~La~~Ga~Vvi~~r~  113 (147)
                      .++.++|+.|.+|.|+.+     |..|++.|.+|.++|.+
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~D   57 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSD   57 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            456677777799999987     78899999999999998

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=93.82  E-value=0.096  Score=35.37  Aligned_cols=38  Identities=18%  Similarity=0.279  Sum_probs=29.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERV  116 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~  116 (147)
                      -.|.+++|.|+ +|+|...+..+...|+ +|++++++ +++
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl   66 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKF   66 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHH
Confidence            35678999975 7888888888888876 58888888 444

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=93.82  E-value=0.017  Score=41.66  Aligned_cols=31  Identities=26%  Similarity=0.538  Sum_probs=25.5

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .|+||||+|=||..+++.|.+.|. ++.++++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~   32 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVH   32 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECC
Confidence            489999999999999999999885 4444444

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=93.78  E-value=0.051  Score=37.69  Aligned_cols=37  Identities=22%  Similarity=0.233  Sum_probs=34.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .++.||+++|-|- +-+|+.+|+++...|++|+++..+
T Consensus        19 ~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~D   55 (163)
T d1v8ba1          19 FLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEID   55 (163)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSC
T ss_pred             ceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecC
Confidence            4689999999998 569999999999999999999998

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.66  E-value=0.052  Score=36.77  Aligned_cols=34  Identities=26%  Similarity=0.315  Sum_probs=28.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVD  117 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~  117 (147)
                      +.+|  |-+-+|.++|++|++.|++|.+.||+ +..+
T Consensus         4 Ig~I--GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~   38 (162)
T d3cuma2           4 IAFI--GLGHMGAPMATNLLKAGYLLNVFDLVQSAVD   38 (162)
T ss_dssp             EEEE--CCSTTHHHHHHHHHHTTCEEEEECSSHHHHH
T ss_pred             EEEE--EEHHHHHHHHHHHHHCCCeEEEEECchhhhh
Confidence            4455  56889999999999999999999999 4433

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=93.63  E-value=0.073  Score=36.30  Aligned_cols=35  Identities=17%  Similarity=0.256  Sum_probs=27.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEE-EEeecCh
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNV-IICSRSE  114 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~V-vi~~r~~  114 (147)
                      .|..++|.|+ ++||...++.+...|+++ +++++++
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~   63 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVE   63 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCH
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHH
Confidence            5678889887 899999999888888865 4566663

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.59  E-value=0.072  Score=35.45  Aligned_cols=36  Identities=25%  Similarity=0.282  Sum_probs=29.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+.++++-.+++-||.++|..|++.|++|.++.+.
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~   73 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGV   73 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Confidence            344455555677889999999999999999999776

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=93.45  E-value=0.094  Score=35.54  Aligned_cols=34  Identities=24%  Similarity=0.233  Sum_probs=27.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      .|.+++|.|+ +++|...++.+...|+ .|++++++
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~   66 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVK   66 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccch
Confidence            4678999875 9999999998877786 56777887

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=93.36  E-value=0.049  Score=37.37  Aligned_cols=32  Identities=22%  Similarity=0.222  Sum_probs=27.6

Q ss_pred             CChHHHHHHHHHHHCCCEEEEeecC-hhHHHHH
Q 032098           89 TKGIGYALAKEFLKAGDNVIICSRS-ERVDSAV  120 (147)
Q Consensus        89 s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~  120 (147)
                      -+-+|..+|++|++.|.+|++.||+ ++.++..
T Consensus        10 lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~   42 (176)
T d2pgda2          10 LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFL   42 (176)
T ss_dssp             CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHH
T ss_pred             EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH
Confidence            3889999999999999999999999 6655543

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.34  E-value=0.07  Score=35.82  Aligned_cols=40  Identities=20%  Similarity=0.234  Sum_probs=31.6

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQS  122 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~  122 (147)
                      |+.+|  |.+-+|.+++..|.+.|.+|++.+|+ +..++..++
T Consensus         2 kIg~I--G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~   42 (152)
T d2ahra2           2 KIGII--GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQ   42 (152)
T ss_dssp             EEEEE--CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEE--eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccc
Confidence            34555  67899999999999999999999998 655554443

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=93.33  E-value=0.066  Score=35.52  Aligned_cols=30  Identities=20%  Similarity=0.262  Sum_probs=27.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +.|-|+ +.||..++..|++.|++|.+++|+
T Consensus         3 I~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~   32 (167)
T d1ks9a2           3 ITVLGC-GALGQLWLTALCKQGHEVQGWLRV   32 (167)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCceEEEEcC
Confidence            556677 999999999999999999999998

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.30  E-value=0.067  Score=37.44  Aligned_cols=35  Identities=26%  Similarity=0.239  Sum_probs=29.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +..+.+.|-|+ |..|.++|..|++.|.+|.+.+|+
T Consensus         5 ~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~   39 (189)
T d1n1ea2           5 LYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMN   39 (189)
T ss_dssp             CCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSC
T ss_pred             ceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEec
Confidence            33345667776 669999999999999999999998

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.24  E-value=0.075  Score=35.46  Aligned_cols=38  Identities=18%  Similarity=0.280  Sum_probs=29.0

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC-hhHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-ERVDSAV  120 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~-~~~~~~~  120 (147)
                      |+.+|  |.+-+|.+++..|.+.| .+|++.+|+ +.+++..
T Consensus         2 kI~fI--G~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~   41 (152)
T d1yqga2           2 NVYFL--GGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLE   41 (152)
T ss_dssp             EEEEE--CCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHH
T ss_pred             EEEEE--cCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhh
Confidence            34455  45999999999998887 889999999 5554443

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=93.23  E-value=0.66  Score=31.44  Aligned_cols=47  Identities=15%  Similarity=0.309  Sum_probs=36.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC--EEEEeecC-hhHHHHHHHHHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga--~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      +..+.+.|.|+ +.+|..++..|+..|-  ++++.|++ +.++....+|..
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h   67 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQH   67 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHH
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhc
Confidence            44556666686 8999999999999984  79999999 666656666653

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.15  E-value=0.12  Score=32.90  Aligned_cols=32  Identities=22%  Similarity=0.384  Sum_probs=28.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |.++|-|| +-||.++|..|.+.|.+|.++.+.
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~   54 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGA   54 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CeEEEECC-CccceeeeeeecccccEEEEEEec
Confidence            56777776 889999999999999999999876

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=93.14  E-value=0.35  Score=32.20  Aligned_cols=42  Identities=21%  Similarity=0.430  Sum_probs=31.8

Q ss_pred             EEEeCCCChHHHHHHHHHHHCC--CEEEEeecC-hhHHHHHHHHHH
Q 032098           83 VLITGSTKGIGYALAKEFLKAG--DNVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      +.|.|+ +.+|..+|..|+..|  .++++.|++ +.++....++..
T Consensus         4 i~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~   48 (143)
T d1llda1           4 LAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQH   48 (143)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHh
Confidence            444586 999999999999888  379999999 555555556654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=93.01  E-value=0.052  Score=37.93  Aligned_cols=36  Identities=25%  Similarity=0.277  Sum_probs=33.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+.||++.|-|.+ .||..+++.+...|++|+..++.
T Consensus        39 ~l~gk~vgIiG~G-~IG~~va~~l~~~g~~v~~~d~~   74 (181)
T d1qp8a1          39 LIQGEKVAVLGLG-EIGTRVGKILAALGAQVRGFSRT   74 (181)
T ss_dssp             CCTTCEEEEESCS-THHHHHHHHHHHTTCEEEEECSS
T ss_pred             cccCceEEEeccc-cccccceeeeecccccccccccc
Confidence            4889999999984 59999999999999999999987

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.94  E-value=0.17  Score=33.92  Aligned_cols=44  Identities=18%  Similarity=0.361  Sum_probs=34.8

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCC--CEEEEeecCh---hHHHHHHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSE---RVDSAVQSLRE  125 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~~---~~~~~~~~l~~  125 (147)
                      .+.|.|+++.+|..++..|+..|  .++++.|+++   +++....++..
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~   50 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYD   50 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchh
Confidence            47899999999999999999988  4899999883   34444555654

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.68  E-value=0.28  Score=31.54  Aligned_cols=32  Identities=19%  Similarity=0.184  Sum_probs=28.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |.++|-|| +-||.++|..|.+.|.+|.++.|.
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~   54 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRH   54 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeec
Confidence            67778877 569999999999999999999886

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.63  E-value=0.083  Score=39.62  Aligned_cols=25  Identities=32%  Similarity=0.405  Sum_probs=21.6

Q ss_pred             CChHHHHHHHHHHHCCCEEEEeecC
Q 032098           89 TKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        89 s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +|..|.++|+++..+|++|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            4668999999999999999988543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.62  E-value=0.087  Score=36.63  Aligned_cols=33  Identities=24%  Similarity=0.227  Sum_probs=27.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +|.|+|-|| +=-|+..|..|++.|.+|+|+.++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            577777777 445899999999999999999764

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.60  E-value=0.23  Score=32.84  Aligned_cols=43  Identities=16%  Similarity=0.261  Sum_probs=31.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCC--CEEEEeecC-hhHHHHHHHHHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      |+.+| |+ +++|..++..++..|  .++++.|++ +.++....++..
T Consensus         2 KI~II-Ga-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~   47 (140)
T d1a5za1           2 KIGIV-GL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIH   47 (140)
T ss_dssp             EEEEE-CC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEEE-Cc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccc
Confidence            34444 86 899999999988776  579999999 656555555544

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.60  E-value=0.14  Score=33.07  Aligned_cols=34  Identities=35%  Similarity=0.431  Sum_probs=28.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ++|.++|-|| +-+|..+|..|++.|.+|.++.+.
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~   62 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDIL   62 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEec
Confidence            4567777765 799999999999999999998765

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.33  E-value=0.31  Score=36.22  Aligned_cols=62  Identities=27%  Similarity=0.194  Sum_probs=41.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecChhHHHHHHHHHHHhCCceEEEEeccccch
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      .+||+|+--|++.|+   ++..+++.|+ +|+.++.++....+.+.+........+.+...|+.+.
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~   94 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEV   94 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTC
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHc
Confidence            478999999998885   4556778886 5888887754444444443333344577777776654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.18  E-value=0.15  Score=32.92  Aligned_cols=32  Identities=22%  Similarity=0.229  Sum_probs=27.2

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |.++|-|| +-||.++|..|.+.|.+|.++.++
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            35666666 789999999999999999998876

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.15  E-value=0.22  Score=31.79  Aligned_cols=32  Identities=19%  Similarity=0.283  Sum_probs=28.0

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +.++|-|| +-||..+|..|++.|.+|.++.+.
T Consensus        23 ~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~   54 (119)
T d3lada2          23 GKLGVIGA-GVIGLELGSVWARLGAEVTVLEAM   54 (119)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CeEEEECC-ChHHHHHHHHHHHcCCceEEEEee
Confidence            56777776 889999999999999999998766

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.97  E-value=0.12  Score=36.05  Aligned_cols=31  Identities=19%  Similarity=0.078  Sum_probs=27.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |+.+|  |.+-+|+.+|..|++.|.+|++.|.+
T Consensus         2 kI~Vi--GlG~vGl~~a~~la~~g~~V~g~D~n   32 (202)
T d1mv8a2           2 RISIF--GLGYVGAVCAGCLSARGHEVIGVDVS   32 (202)
T ss_dssp             EEEEE--CCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred             EEEEE--CCCHhHHHHHHHHHhCCCcEEEEeCC
Confidence            45555  66899999999999999999999998

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=91.95  E-value=0.14  Score=34.20  Aligned_cols=44  Identities=11%  Similarity=0.146  Sum_probs=31.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCC--CEEEEeecC-hhHHHHHHHHHH
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      .|+.+| |+ +.+|..++..++..|  .++++.|++ +.++....+|..
T Consensus         2 ~KI~II-Ga-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~   48 (142)
T d1y6ja1           2 SKVAII-GA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINH   48 (142)
T ss_dssp             CCEEEE-CC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTT
T ss_pred             CeEEEE-CC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeecc
Confidence            355555 86 999999999999887  379999999 544555556653

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=91.76  E-value=0.42  Score=30.38  Aligned_cols=32  Identities=25%  Similarity=0.249  Sum_probs=28.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |.++|-|| +-||.++|..|++.|.+|.++.|.
T Consensus        23 ~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~   54 (117)
T d1onfa2          23 KKIGIVGS-GYIAVELINVIKRLGIDSYIFARG   54 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHTTTCEEEEECSS
T ss_pred             CEEEEECC-chHHHHHHHHHHhccccceeeehh
Confidence            56777776 789999999999999999999875

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.65  E-value=0.44  Score=30.45  Aligned_cols=32  Identities=19%  Similarity=0.325  Sum_probs=27.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |.++|-|| +-||.++|..|.+.|++|.++.+.
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~   55 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQ   55 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEec
Confidence            56777776 789999999999999999998775

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=91.60  E-value=0.24  Score=32.86  Aligned_cols=42  Identities=12%  Similarity=0.129  Sum_probs=31.4

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC-hhHHHHHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-ERVDSAVQSLR  124 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~-~~~~~~~~~l~  124 (147)
                      .+.|.|+ +.+|..+|..|+..+ +++++.|.+ +.++....++.
T Consensus         3 KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~   46 (142)
T d1uxja1           3 KISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLY   46 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHH
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhh
Confidence            4555585 999999999998877 589999988 55555455553

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=91.46  E-value=0.32  Score=32.04  Aligned_cols=40  Identities=8%  Similarity=0.170  Sum_probs=29.9

Q ss_pred             EEEeCCCChHHHHHHHHHHHCC--CEEEEeecC-hhHHHHHHHH
Q 032098           83 VLITGSTKGIGYALAKEFLKAG--DNVIICSRS-ERVDSAVQSL  123 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~-~~~~~~~~~l  123 (147)
                      +.|.|+ +.+|..++..|+..|  .++++.|++ +.++....++
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~   45 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDM   45 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHH
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhh
Confidence            445585 899999999999987  589999999 4444333344

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=91.33  E-value=0.51  Score=29.76  Aligned_cols=32  Identities=19%  Similarity=0.156  Sum_probs=27.0

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |.++|-|| +-+|.++|..|.+.|.+|.++.+.
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~   53 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMF   53 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeec
Confidence            45666655 789999999999999999998886

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.27  E-value=0.28  Score=30.91  Aligned_cols=35  Identities=17%  Similarity=0.276  Sum_probs=30.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+|.++|-|| +-||..+|..|++.|.+|.++.+.
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~   54 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRT   54 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeecc
Confidence            34678888877 889999999999999999998876

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.26  E-value=0.24  Score=31.86  Aligned_cols=34  Identities=32%  Similarity=0.415  Sum_probs=29.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+|.++|-|| +-+|.++|..|.+.|.+|.++.+.
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~   62 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQ   62 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeec
Confidence            3567777776 899999999999999999998776

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.24  E-value=0.24  Score=31.70  Aligned_cols=33  Identities=30%  Similarity=0.389  Sum_probs=28.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +|.++|-|| +-+|.++|..|.+.|.+|.++.+.
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~   64 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRG   64 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEecc
Confidence            456777666 889999999999999999999887

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.18  E-value=0.21  Score=33.06  Aligned_cols=31  Identities=16%  Similarity=0.142  Sum_probs=26.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |+.+|  |.+-+|..+++.|.+.|.+|++.+++
T Consensus         2 kIgiI--G~G~mG~~ia~~l~~~g~~v~~~~~~   32 (152)
T d1i36a2           2 RVGFI--GFGEVAQTLASRLRSRGVEVVTSLEG   32 (152)
T ss_dssp             EEEEE--SCSHHHHHHHHHHHHTTCEEEECCTT
T ss_pred             EEEEE--cHHHHHHHHHHHHHHCCCeEEEEcCc
Confidence            45666  66999999999999999999998877

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=90.89  E-value=0.14  Score=36.43  Aligned_cols=30  Identities=23%  Similarity=0.308  Sum_probs=25.6

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ++|-|| +-.|..+|.+|+++|.+|++++++
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~   36 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESG   36 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            555555 788999999999999999999875

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.66  E-value=0.62  Score=34.57  Aligned_cols=62  Identities=19%  Similarity=0.112  Sum_probs=41.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecChhHHHHHHHHHHHhCCceEEEEeccccch
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      .+||+|+--|++.|+   ++..+++.|+ +|+.++.++.++.+.+..........+.+...|+.+.
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~l   99 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDV   99 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhhc
Confidence            578999999998884   3556778887 6888887754444444443333344577777676654

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=90.63  E-value=0.44  Score=30.73  Aligned_cols=33  Identities=21%  Similarity=0.351  Sum_probs=28.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .|.++|-|| +-||.++|..|.+.|.+|.++.+.
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~   58 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMM   58 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEee
Confidence            356777776 889999999999999999998765

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=90.53  E-value=0.54  Score=31.45  Aligned_cols=43  Identities=14%  Similarity=0.233  Sum_probs=32.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCC-CEEEEeecC-hhHHHHHHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~G-a~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      ++.|-|+ +++|..++..|...+ .++++.|++ +.++....++..
T Consensus         5 KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~   49 (150)
T d1t2da1           5 KIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSH   49 (150)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHT
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhh
Confidence            4556685 899999999888877 579999998 555555555543

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=90.41  E-value=0.63  Score=32.00  Aligned_cols=37  Identities=22%  Similarity=0.338  Sum_probs=30.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .....|.++|-|| +=-|+..|..|+++|++|++.++.
T Consensus        39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~   75 (179)
T d1ps9a3          39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAH   75 (179)
T ss_dssp             SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEecc
Confidence            3456678888887 566899999999999999999875

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=90.38  E-value=0.57  Score=31.17  Aligned_cols=23  Identities=30%  Similarity=0.476  Sum_probs=21.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAG  104 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~G  104 (147)
                      .+.|+||++.+|..++..|+..+
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~   28 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGE   28 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhcc
Confidence            69999999999999999999765

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.26  E-value=0.19  Score=32.38  Aligned_cols=32  Identities=16%  Similarity=0.341  Sum_probs=28.2

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |.++|-|| +-||.++|..|.+.|.+|.++.|.
T Consensus        26 ~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~   57 (123)
T d1dxla2          26 KKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFA   57 (123)
T ss_dssp             SEEEESCC-SHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEc
Confidence            56777776 899999999999999999998775

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.93  E-value=0.12  Score=35.85  Aligned_cols=34  Identities=18%  Similarity=0.228  Sum_probs=29.3

Q ss_pred             CCeEEEeCCCChHHHH-----HHHHHHHCCCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYA-----LAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~-----~a~~La~~Ga~Vvi~~r~  113 (147)
                      ||++.|+|+.+|.|+.     +|..|++.|.+|.++|-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            6899999999998875     466788999999999976

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=89.88  E-value=1.3  Score=30.01  Aligned_cols=60  Identities=12%  Similarity=0.116  Sum_probs=38.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccc
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAA  141 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~  141 (147)
                      .++.++=-|++.|.   .+..|+++|++|+.+|.++..-+..++..+..+...+.+...|+.+
T Consensus        30 ~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~   89 (198)
T d2i6ga1          30 APGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNT   89 (198)
T ss_dssp             CSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTT
T ss_pred             CCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccc
Confidence            44467777876553   4567889999999999994333333333344444457777777664

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.70  E-value=1.2  Score=29.26  Aligned_cols=42  Identities=14%  Similarity=0.138  Sum_probs=31.6

Q ss_pred             EEEeCCCChHHHHHHHHHHHCC--CEEEEeecC-hhHHHHHHHHHH
Q 032098           83 VLITGSTKGIGYALAKEFLKAG--DNVIICSRS-ERVDSAVQSLRE  125 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~-~~~~~~~~~l~~  125 (147)
                      +.|.|+ +.+|..+|..++..|  .++++.|++ +.++....+|..
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~   47 (142)
T d1ojua1           3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAH   47 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhh
Confidence            344485 999999999999877  469999999 555555556653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=89.64  E-value=0.28  Score=35.56  Aligned_cols=33  Identities=27%  Similarity=0.219  Sum_probs=29.6

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEe
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC  110 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~  110 (147)
                      +++||+++|-| .+.+|..+|+.|.+.|++|+.+
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~v   60 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAV   60 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEe
Confidence            68999999997 5899999999999999998754

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=89.64  E-value=0.45  Score=31.71  Aligned_cols=44  Identities=23%  Similarity=0.307  Sum_probs=33.0

Q ss_pred             eEEEeCCCChHHHHHHHHHHH-C--CCEEEEeecChhHHHHHHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLK-A--GDNVIICSRSERVDSAVQSLRE  125 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~-~--Ga~Vvi~~r~~~~~~~~~~l~~  125 (147)
                      .+.|.|+++.+|..++..|+. .  +.++++.|..+..+....++..
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h   48 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSH   48 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHT
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHC
Confidence            467999999999999998864 3  4689999987545444556644

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.62  E-value=0.22  Score=33.37  Aligned_cols=33  Identities=12%  Similarity=0.207  Sum_probs=27.0

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCE-EEEeecC
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~-Vvi~~r~  113 (147)
                      +|.|+|-|| +=.|+..|..|+++|++ |.+.++.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~   37 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQ   37 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEec
Confidence            466777776 66789999999999985 9898877

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=89.35  E-value=0.57  Score=31.02  Aligned_cols=36  Identities=28%  Similarity=0.341  Sum_probs=28.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCC--EEEEeecC-hhHH
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGD--NVIICSRS-ERVD  117 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga--~Vvi~~r~-~~~~  117 (147)
                      |.+.|-|. +-||..+|+.|.+.|.  +|+..|++ +.++
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~   40 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESIS   40 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHH
Confidence            45666665 8999999999999995  68888988 4443

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.26  E-value=0.58  Score=32.18  Aligned_cols=38  Identities=18%  Similarity=0.145  Sum_probs=33.5

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ...+.||++.|-|. ++||..+++.+...|++|+..++.
T Consensus        39 ~~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~   76 (184)
T d1ygya1          39 GTEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPY   76 (184)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTT
T ss_pred             cccccceeeeeccc-cchhHHHHHHhhhccceEEeecCC
Confidence            34578999888885 899999999999999999999887

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.19  E-value=0.66  Score=30.84  Aligned_cols=32  Identities=22%  Similarity=0.337  Sum_probs=25.6

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCC-------EEEEeecC
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGD-------NVIICSRS  113 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga-------~Vvi~~r~  113 (147)
                      .+.|+||++.+|..++..|+..+-       .+++.|.+
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~   43 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDIT   43 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCG
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCc
Confidence            689999999999999999986542       35666665

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=89.13  E-value=1.5  Score=28.91  Aligned_cols=44  Identities=11%  Similarity=0.147  Sum_probs=33.2

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCCC--EEEEeecC---hhHHHHHHHHHH
Q 032098           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSRS---ERVDSAVQSLRE  125 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~Ga--~Vvi~~r~---~~~~~~~~~l~~  125 (147)
                      .+.|.|+++.+|..+|..++..|.  ++++.|.+   +.++....++..
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~   50 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNH   50 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHH
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhh
Confidence            477899999999999999999873  69999965   334434555543

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=89.11  E-value=0.37  Score=33.80  Aligned_cols=37  Identities=19%  Similarity=0.131  Sum_probs=33.6

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+.||++.|-|- |.||..+|+.+...|++|+..|+.
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~   75 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIF   75 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCcc
Confidence            3588999999987 899999999999999999998876

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.08  E-value=0.38  Score=36.05  Aligned_cols=34  Identities=12%  Similarity=0.230  Sum_probs=30.5

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEe
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC  110 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~  110 (147)
                      ..++||+++|.|. +.+|..+|+.|.+.|++|+.+
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~v   65 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAV   65 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEE
Confidence            4689999999998 799999999999999998754

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=89.01  E-value=0.25  Score=35.71  Aligned_cols=33  Identities=18%  Similarity=0.296  Sum_probs=21.9

Q ss_pred             CeEEEeCCCCh-H---HHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKG-I---GYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~G-I---G~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |.++|++|+.| -   ..+++++|.++|++|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            44555554444 3   346888999999999876544

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=89.00  E-value=0.45  Score=33.15  Aligned_cols=38  Identities=21%  Similarity=0.142  Sum_probs=34.0

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ...+.||++.|-|. +.||..+++.+...|++|+..++.
T Consensus        44 ~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~   81 (193)
T d1mx3a1          44 AARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPY   81 (193)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTT
T ss_pred             ceeeeCceEEEecc-ccccccceeeeeccccceeeccCc
Confidence            34689999999876 899999999999999999999886

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=88.98  E-value=0.36  Score=33.77  Aligned_cols=37  Identities=27%  Similarity=0.230  Sum_probs=33.3

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+.||++.|-|. +.||..+++.+...|++|+..|+.
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~   77 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPY   77 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCc
Confidence            4688999999887 789999999999999999999886

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Azotobacter vinelandii [TaxId: 354]

Probab=88.97  E-value=0.13  Score=37.44  Aligned_cols=33  Identities=24%  Similarity=0.359  Sum_probs=27.7

Q ss_pred             CCeEEEeCCCChHHHHH-----HHHHHHCCCEEEEeecC
Q 032098           80 PYNVLITGSTKGIGYAL-----AKEFLKAGDNVIICSRS  113 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~-----a~~La~~Ga~Vvi~~r~  113 (147)
                      .|+++|.| .||.|+.+     |..|++.|.+|.++|.+
T Consensus         2 Mr~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~D   39 (289)
T d2afhe1           2 MRQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCD   39 (289)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             ccEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecC
Confidence            35777887 89988875     77899999999999987

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=88.96  E-value=1.1  Score=28.78  Aligned_cols=34  Identities=21%  Similarity=0.305  Sum_probs=28.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+|.++|-|| +=+|.++|..|.+.|.+|.++.+.
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~   67 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTA   67 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeec
Confidence            3567777766 889999999999999999998775

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.86  E-value=0.13  Score=35.84  Aligned_cols=33  Identities=18%  Similarity=0.359  Sum_probs=28.5

Q ss_pred             CeEEEeCCCChHHHH-----HHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYA-----LAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~-----~a~~La~~Ga~Vvi~~r~  113 (147)
                      |++.|+++.+|.|+.     +|..|++.|.+|.++|.+
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D   39 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDAD   39 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            799999999998875     466788999999999887

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=88.37  E-value=1  Score=30.86  Aligned_cols=38  Identities=16%  Similarity=0.116  Sum_probs=33.9

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ...+.++++.|-|. +.||.++++.+...|.+|+..++.
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~   76 (188)
T d2naca1          39 AYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRH   76 (188)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSS
T ss_pred             ceeccccceeeccc-cccchhhhhhhhccCceEEEEeec
Confidence            44688999999886 889999999999999999999986

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=88.19  E-value=0.28  Score=35.31  Aligned_cols=30  Identities=27%  Similarity=0.483  Sum_probs=24.8

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      |+|-|| +-+|.++|.+|+++|. +|++++++
T Consensus         4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            555565 6899999999999996 69999876

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=87.95  E-value=0.31  Score=34.44  Aligned_cols=34  Identities=29%  Similarity=0.376  Sum_probs=27.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +.|.|+|-||+ =-|+..|..|++.|.+|+|+.++
T Consensus        29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~   62 (370)
T d2iida1          29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEAS   62 (370)
T ss_dssp             SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCC
Confidence            44678888874 44899999999999999998764

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=87.89  E-value=0.14  Score=36.71  Aligned_cols=32  Identities=22%  Similarity=0.393  Sum_probs=26.8

Q ss_pred             CeEEEeCCCChHHHHH-----HHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYAL-----AKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~-----a~~La~~Ga~Vvi~~r~  113 (147)
                      |+|.|+| .||.|+.+     |..|++.|.+|.++|.+
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D   38 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCD   38 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecC
Confidence            5777887 88988865     45889999999999988

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=87.88  E-value=0.33  Score=35.56  Aligned_cols=34  Identities=18%  Similarity=0.288  Sum_probs=29.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEe
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC  110 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~  110 (147)
                      .+++||+++|.|. +.+|..+++.|.+.|++|+.+
T Consensus        32 ~~l~g~~v~IQGf-GnVG~~~a~~L~e~Gakvvav   65 (255)
T d1bgva1          32 DTLVGKTVALAGF-GNVAWGAAKKLAELGAKAVTL   65 (255)
T ss_dssp             CCSTTCEEEECCS-SHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEE
Confidence            3689999999994 889999999999999998744

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=87.87  E-value=0.4  Score=30.15  Aligned_cols=32  Identities=22%  Similarity=0.388  Sum_probs=26.6

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |.++|-|| +-+|.++|..|.+.|.+|.++.+.
T Consensus        22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~   53 (115)
T d1lvla2          22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEAR   53 (115)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CeEEEECC-CHHHHHHHHHHhhcccceEEEeee
Confidence            45555555 889999999999999999998775

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=87.67  E-value=0.32  Score=34.54  Aligned_cols=30  Identities=20%  Similarity=0.418  Sum_probs=24.7

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ++|-|| +=.|..+|.+|+++|.+|+++++.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            455554 677999999999999999999774

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=87.29  E-value=0.17  Score=34.52  Aligned_cols=31  Identities=19%  Similarity=0.223  Sum_probs=26.6

Q ss_pred             CeEEEeCCCChHHHH-----HHHHHHHCCCEEEEee
Q 032098           81 YNVLITGSTKGIGYA-----LAKEFLKAGDNVIICS  111 (147)
Q Consensus        81 kv~vVTG~s~GIG~~-----~a~~La~~Ga~Vvi~~  111 (147)
                      |..+|||-+.|.|+.     +|..|+++|.+|.++|
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999999898875     4668889999999876

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=87.19  E-value=0.46  Score=30.86  Aligned_cols=34  Identities=21%  Similarity=0.140  Sum_probs=28.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCC--CEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~  113 (147)
                      .||.++|-|| +-.|..+|..|.+.|  .+|++++++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~   36 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPN   36 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECC
Confidence            4889999998 566999999999988  478887765

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=86.87  E-value=0.61  Score=30.82  Aligned_cols=39  Identities=21%  Similarity=0.130  Sum_probs=31.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSA  119 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~  119 (147)
                      .+|..|+.-|++.|   ..+..|+++|++|+.+|.+ +.++.+
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a   58 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERY   58 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHH
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHH
Confidence            46789999999888   3677889999999999999 434333

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.67  E-value=0.77  Score=30.40  Aligned_cols=33  Identities=18%  Similarity=0.335  Sum_probs=28.6

Q ss_pred             eEEEeCCCChHHHHHHHHHHHCC--CEEEEeecCh
Q 032098           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSE  114 (147)
Q Consensus        82 v~vVTG~s~GIG~~~a~~La~~G--a~Vvi~~r~~  114 (147)
                      .+.|.||++.+|..+|..|+..|  .++++.|.++
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~   36 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH   36 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccc
Confidence            57899999999999999999887  3599999883

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.35  E-value=2.2  Score=29.93  Aligned_cols=62  Identities=23%  Similarity=0.249  Sum_probs=44.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecChhHHHHHHHHHHHhCCceEEEEeccccc
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAA  141 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~  141 (147)
                      -+|..++.-|+++|--.++.-.|+  |.+|+.+++++.+.+...+..++.+...+.+...|..+
T Consensus        77 ~~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~  138 (215)
T d1jg1a_          77 KPGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK  138 (215)
T ss_dssp             CTTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG
T ss_pred             CccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECcccc
Confidence            356688888988887777666665  56799999995555555444455566678888777664

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=86.18  E-value=0.21  Score=35.69  Aligned_cols=36  Identities=31%  Similarity=0.398  Sum_probs=30.6

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      .++++.|+|-|+ +|+|-.++..|++.|- ++.++|-+
T Consensus        27 kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          27 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCc
Confidence            477889999995 8999999999999994 68887654

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=86.12  E-value=1.7  Score=29.61  Aligned_cols=59  Identities=19%  Similarity=0.130  Sum_probs=38.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccch
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      +..++=-|++.|+-   +..|++.|++|+.+|.+ +.++.+.+.+ ...+...+.+...|..+.
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~-~~~~~~~i~~~~~d~~~l   75 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFI-EGNGHQQVEYVQGDAEQM   75 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHH-HHTTCCSEEEEECCC-CC
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhcc-cccccccccccccccccc
Confidence            45677788877744   35678889999999999 4444443333 334455677887777654

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=86.02  E-value=1.8  Score=28.34  Aligned_cols=62  Identities=10%  Similarity=0.056  Sum_probs=38.0

Q ss_pred             CCCCCeEEEeCCCCh-HHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccch
Q 032098           77 MLPPYNVLITGSTKG-IGYALAKEFLKAGD-NVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        77 ~l~gkv~vVTG~s~G-IG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      .++|+.++=.|++.| +|.    +.+.+|+ +|+.++.+ +..+...+.+....-...+.+...|..+.
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~~   76 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERA   76 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHH
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhccccccc
Confidence            467887766665554 555    3456786 69999998 44444444443322234577888776553

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.73  E-value=1.8  Score=29.90  Aligned_cols=59  Identities=15%  Similarity=0.054  Sum_probs=39.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccch
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      +++.++=-|++.|   ..+..|++.|++|+.+|.+ +-++.+.+.+. ..+. .+.+...|+.+.
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~-~~~~-~i~~~~~d~~~l  100 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAK-ERNL-KIEFLQGDVLEI  100 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HTTC-CCEEEESCGGGC
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccc-cccc-cchheehhhhhc
Confidence            4567888888877   3456788999999999999 44444444433 3232 466777776654

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.61  E-value=1.8  Score=29.86  Aligned_cols=63  Identities=24%  Similarity=0.215  Sum_probs=39.5

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccch
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      ..+++|+.++=-|++.|.   ++..++..|+ +|+.+|.+ +.++.+.+.+. ..+ ....+...|+.+.
T Consensus        42 ~~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~-~~~-~~~~~~~~d~~~~  106 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLG-EFK-GKFKVFIGDVSEF  106 (201)
T ss_dssp             TTSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTG-GGT-TSEEEEESCGGGC
T ss_pred             cCCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHH-HcC-CCceEEECchhhh
Confidence            446899998888877662   2233456775 79999999 55554444443 323 3456666676554

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=85.17  E-value=0.8  Score=31.69  Aligned_cols=32  Identities=25%  Similarity=0.267  Sum_probs=25.6

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +.|+|-|| +=-|+.+|..|+++|.+|++++++
T Consensus         5 ~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~   36 (265)
T d2voua1           5 DRIAVVGG-SISGLTAALMLRDAGVDVDVYERS   36 (265)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCC
Confidence            45667776 445788888999999999999875

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.01  E-value=0.59  Score=31.02  Aligned_cols=30  Identities=17%  Similarity=0.236  Sum_probs=25.0

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ++|-|+ +=-|+.+|..|++.|.+|.++.++
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~   37 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQ   37 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCC
Confidence            566665 455899999999999999999886

>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=84.71  E-value=0.4  Score=34.27  Aligned_cols=32  Identities=25%  Similarity=0.452  Sum_probs=25.9

Q ss_pred             CeEEEeCCCChHHHH-----HHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYA-----LAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~-----~a~~La~~Ga~Vvi~~r~  113 (147)
                      |+++++| .||.|+.     +|..|++.|.+|.++|.+
T Consensus         9 ~~i~~sG-KGGVGKTTvaa~lA~~lA~~G~rVLlvD~D   45 (296)
T d1ihua1           9 PYLFFTG-KGGVGKTSISCATAIRLAEQGKRVLLVSTD   45 (296)
T ss_dssp             SEEEEEC-STTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             eEEEEEC-CCcChHHHHHHHHHHHHHHCCCCEEEEeCC
Confidence            5677665 7888876     477899999999999987

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=84.54  E-value=1.9  Score=29.62  Aligned_cols=37  Identities=24%  Similarity=0.117  Sum_probs=33.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ..+.||++-|-|. +.||..+++.+...|++|+..|+.
T Consensus        43 ~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~   79 (191)
T d1gdha1          43 EKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTH   79 (191)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSS
T ss_pred             ceecccceEEeec-ccchHHHHHHHHhhcccccccccc
Confidence            4678999998887 899999999999999999998876

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=84.25  E-value=0.65  Score=31.65  Aligned_cols=30  Identities=13%  Similarity=0.084  Sum_probs=24.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      |+.+|  |.+-+|+.+|..|+ .|.+|+..|.+
T Consensus         2 kI~Vi--GlG~vGl~~a~~~a-~g~~V~g~Din   31 (196)
T d1dlja2           2 KIAVA--GSGYVGLSLGVLLS-LQNEVTIVDIL   31 (196)
T ss_dssp             EEEEE--CCSHHHHHHHHHHT-TTSEEEEECSC
T ss_pred             EEEEE--CCChhHHHHHHHHH-CCCcEEEEECC
Confidence            46666  47899999998765 69999999998

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=83.70  E-value=0.88  Score=33.51  Aligned_cols=34  Identities=21%  Similarity=0.360  Sum_probs=28.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      +.|.++|-||+ =-|+.+|..|++.|.+|.|+..+
T Consensus         1 k~KKI~IIGaG-~sGL~aA~~L~k~G~~V~viEk~   34 (314)
T d2bi7a1           1 KSKKILIVGAG-FSGAVIGRQLAEKGHQVHIIDQR   34 (314)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHhCCCCEEEEECC
Confidence            35788888873 45889999999999999999877

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=83.59  E-value=2.5  Score=28.33  Aligned_cols=60  Identities=13%  Similarity=0.093  Sum_probs=39.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccc
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAA  141 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~  141 (147)
                      +|.+++=-|++.|   .++..|++.+.+|+.+|.+ +.++.+.+.+....-...+.+...|..+
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~   93 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE   93 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh
Confidence            5667777787776   2334567778899999999 6666666665443222357777766543

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=83.31  E-value=4.4  Score=27.88  Aligned_cols=62  Identities=18%  Similarity=0.176  Sum_probs=39.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccc
Q 032098           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAA  141 (147)
Q Consensus        79 ~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~  141 (147)
                      +|..|+--|++.|--....-.+...+.+|+.++.+ +.++.+.+.+ +..+...+.+...|..+
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~-~~~~~~n~~~~~~d~~~  137 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNV-ERLGIENVIFVCGDGYY  137 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHH-HHTTCCSEEEEESCGGG
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhH-hhhcccccccccCchHH
Confidence            56688888887776555444455556799999999 5455555555 34444455566556543

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.07  E-value=0.75  Score=35.92  Aligned_cols=35  Identities=26%  Similarity=0.452  Sum_probs=29.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~  113 (147)
                      |++..|+|-|+ +|||-.+++.|+..|. ++.++|.+
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            56677888888 7899999999999995 68887664

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=82.84  E-value=1.5  Score=29.91  Aligned_cols=36  Identities=19%  Similarity=0.017  Sum_probs=31.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      .+.++++.|-|. +.||..+++.+...|++|+..++.
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~   76 (188)
T d1sc6a1          41 EARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIE   76 (188)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cccceEEEEeec-ccchhhhhhhcccccceEeecccc
Confidence            578888888755 899999999999999999999876

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=82.71  E-value=1.2  Score=31.02  Aligned_cols=61  Identities=20%  Similarity=0.123  Sum_probs=42.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccch
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      ..+++.++=-|++.|.   .+..|++.|.+|+.+|.+ +-++.+.+.+... +. .+.+...|+.+.
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~-~~-~v~~~~~d~~~~   96 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ-GL-KPRLACQDISNL   96 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT-TC-CCEEECCCGGGC
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc-Cc-cceeeccchhhh
Confidence            3556788889988885   677888999999999999 4455444444332 22 466777777654

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.60  E-value=1.1  Score=29.78  Aligned_cols=36  Identities=19%  Similarity=0.396  Sum_probs=26.0

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHCCCE-EEEeecC
Q 032098           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRS  113 (147)
Q Consensus        76 ~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga~-Vvi~~r~  113 (147)
                      +.+.+||+|| | ++-.|...|..+.+.|++ |.++.|+
T Consensus        42 p~~~~kVvVI-G-GGdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          42 PSIRGAVIVL-G-AGDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCCCSEEEEE-C-SSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             ccCCCEEEEE-C-CChhHHHHHHHHHHcCCcceeEEEeC
Confidence            3455665555 4 467788999999999986 7677776

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=82.30  E-value=1.9  Score=29.80  Aligned_cols=35  Identities=23%  Similarity=0.307  Sum_probs=29.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      -.+|.++|-|| +=.|+..|..|+++|.+|.+.++.
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~   81 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTA   81 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeec
Confidence            46678888887 445899999999999999999776

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=81.43  E-value=3.3  Score=29.64  Aligned_cols=64  Identities=16%  Similarity=0.253  Sum_probs=43.4

Q ss_pred             CCCCeEEEeCCCCh-HHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccch
Q 032098           78 LPPYNVLITGSTKG-IGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAAL  142 (147)
Q Consensus        78 l~gkv~vVTG~s~G-IG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~  142 (147)
                      -.|..++=-|+++| +...+++.+.. +.+|+.++++ +.++.+.+.+....+...+.+...|+.+.
T Consensus        84 ~pG~rVLEiG~GsG~lt~~la~~v~~-~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~  149 (250)
T d1yb2a1          84 RPGMDILEVGVGSGNMSSYILYALNG-KGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF  149 (250)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHHHTT-SSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC
T ss_pred             CCcCEEEEeeeeCcHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeecc
Confidence            46778888887766 45555555544 4599999999 66666666665544455677777777653

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=81.28  E-value=0.91  Score=32.58  Aligned_cols=30  Identities=30%  Similarity=0.570  Sum_probs=25.0

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeecC
Q 032098           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (147)
Q Consensus        83 ~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~  113 (147)
                      ++|-|+ +-.|+.+|..+++.|.+|+|+.+.
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            556665 677899999999999999998764

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.20  E-value=1.4  Score=30.66  Aligned_cols=40  Identities=18%  Similarity=0.095  Sum_probs=31.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHH
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAV  120 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~  120 (147)
                      ..+..|+.-|++.|   ..+..|++.|++|+.+|.. +.++.+.
T Consensus        44 ~~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~   84 (229)
T d2bzga1          44 KSGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFF   84 (229)
T ss_dssp             CCSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHH
Confidence            36678999999888   4578899999999999998 4444333

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=81.08  E-value=3.1  Score=29.78  Aligned_cols=58  Identities=19%  Similarity=0.119  Sum_probs=38.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEecccc
Q 032098           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSA  140 (147)
Q Consensus        78 l~gkv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs  140 (147)
                      .+|+.++=-|+++|+   ++..+++.|++|+.+|.+ +.++.+.+..... +. ...+...|+.
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n-~~-~~~~~~~d~~  177 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRN-GV-RPRFLEGSLE  177 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT-TC-CCEEEESCHH
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHc-CC-ceeEEecccc
Confidence            578899999999986   234567889999999999 5555555444332 32 2344555544

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=80.84  E-value=1.2  Score=32.00  Aligned_cols=33  Identities=30%  Similarity=0.368  Sum_probs=27.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHH-CCCEEEEe
Q 032098           77 MLPPYNVLITGSTKGIGYALAKEFLK-AGDNVIIC  110 (147)
Q Consensus        77 ~l~gkv~vVTG~s~GIG~~~a~~La~-~Ga~Vvi~  110 (147)
                      .++||+++|.|. +.+|..+++.|++ .|++|+.+
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~v   62 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAV   62 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeec
Confidence            589999999998 5699999999986 48887643

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=80.76  E-value=3.3  Score=27.52  Aligned_cols=50  Identities=18%  Similarity=0.234  Sum_probs=32.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHC--CCEEEEeecChhHHHHHHHHHHHhCCc
Q 032098           80 PYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSERVDSAVQSLREEFGEQ  130 (147)
Q Consensus        80 gkv~vVTG~s~GIG~~~a~~La~~--Ga~Vvi~~r~~~~~~~~~~l~~~~~~~  130 (147)
                      .|.+.|-|++|.||..+..-+.+.  ..+|+.+.-+...+.+.+.+ .++.+.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~-~ef~Pk   53 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAA-KRTNAK   53 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHH-HHTTCS
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHH-Hhhccc
Confidence            478999999999999988877664  46666544343333333333 445554

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=80.69  E-value=3.9  Score=27.28  Aligned_cols=56  Identities=14%  Similarity=0.017  Sum_probs=35.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHCCCEEEEeecC-hhHHHHHHHHHHHhCCceEEEEeccccc
Q 032098           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-ERVDSAVQSLREEFGEQHVCVTWQHSAA  141 (147)
Q Consensus        81 kv~vVTG~s~GIG~~~a~~La~~Ga~Vvi~~r~-~~~~~~~~~l~~~~~~~~v~~~~~Dvs~  141 (147)
                      ..|+=-|++.|.   .+..|++.|++|+.+|.+ +.++.+.+.+... +. .+.....|..+
T Consensus        39 ~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~-~~-~~~~~~~d~~~   95 (226)
T d1ve3a1          39 GKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR-ES-NVEFIVGDARK   95 (226)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-CCEEEECCTTS
T ss_pred             CEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc-cc-ccccccccccc
Confidence            357788888876   556788999999999999 4444444433332 32 23444555554

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=80.30  E-value=1.5  Score=30.54  Aligned_cols=61  Identities=16%  Similarity=0.113  Sum_probs=39.0

Q ss_pred             CCCCCCCeEEEeCCCChHHHHHHHHHHHCCC-EEEEeecChhHHHHHHHHHHHhCCceEEEEeccccchh
Q 032098           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSERVDSAVQSLREEFGEQHVCVTWQHSAALS  143 (147)
Q Consensus        75 ~~~l~gkv~vVTG~s~GIG~~~a~~La~~Ga-~Vvi~~r~~~~~~~~~~l~~~~~~~~v~~~~~Dvs~~~  143 (147)
                      ..+++||.++=-|++.|+   ++..++..|+ +|+.+|.++..-+...   +.  ...+.+...|+.+.+
T Consensus        44 ~~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar---~N--~~~~~~~~~D~~~l~  105 (197)
T d1ne2a_          44 DGNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAK---RN--CGGVNFMVADVSEIS  105 (197)
T ss_dssp             HTSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHH---HH--CTTSEEEECCGGGCC
T ss_pred             cCCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHH---Hc--cccccEEEEehhhcC
Confidence            346899999999988883   2345667775 5999999843333322   22  123556677776544