BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032101
(147 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449461783|ref|XP_004148621.1| PREDICTED: high mobility group B protein 1-like [Cucumis sativus]
Length = 169
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 94/131 (71%), Positives = 108/131 (82%), Gaps = 2/131 (1%)
Query: 1 MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MKG+KGKG +RVS+EALKP +DRKVGKRKA K D G KR K++ KAKKDPNKPKRPP
Sbjct: 1 MKGSKGKGTSRVSKEALKPVDDRKVGKRKAVV-KADKGIKRPTKKDLKAKKDPNKPKRPP 59
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKK 119
SAFFVFLEEFRK +K+ENPNV AVSAVGKA G KWKS+S AEKAPYE+KA K K+EY K
Sbjct: 60 SAFFVFLEEFRKEYKRENPNVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKRKAEYEKL 119
Query: 120 MNAYNKKQVTN 130
M AY+ K+V +
Sbjct: 120 MRAYDSKKVAS 130
>gi|255574381|ref|XP_002528104.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223532493|gb|EEF34283.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 171
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/128 (78%), Positives = 111/128 (86%), Gaps = 2/128 (1%)
Query: 1 MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MK +KG GAA+ S++ALKP +DRKVGKRKAA A +D SK + KREKKAKKDPNKPKRPP
Sbjct: 1 MKNSKGTGAAKASKDALKPADDRKVGKRKAAAA-VDRSSKLKAKREKKAKKDPNKPKRPP 59
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKK 119
SAFFVFLEEFRKTFKKENP+VT+V+AVGKA G KWKSMS AEKAPYE+KA K K EYGK
Sbjct: 60 SAFFVFLEEFRKTFKKENPSVTSVAAVGKAGGAKWKSMSSAEKAPYEAKAAKKKDEYGKL 119
Query: 120 MNAYNKKQ 127
MNAYNKKQ
Sbjct: 120 MNAYNKKQ 127
>gi|297819892|ref|XP_002877829.1| hypothetical protein ARALYDRAFT_323737 [Arabidopsis lyrata subsp.
lyrata]
gi|297323667|gb|EFH54088.1| hypothetical protein ARALYDRAFT_323737 [Arabidopsis lyrata subsp.
lyrata]
Length = 185
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/126 (71%), Positives = 102/126 (80%), Gaps = 4/126 (3%)
Query: 1 MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MK AKGK + ++EALKP +DRKVGKRKA K +KR+ ++EKKAKKDPNKPKR P
Sbjct: 1 MKTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEK---ATKRETRKEKKAKKDPNKPKRAP 57
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKK 119
SAFFVFLE+FR TFKKENPNV AVSAVGKA G KWKSMS AEKAPYE KA K K+EY K+
Sbjct: 58 SAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQ 117
Query: 120 MNAYNK 125
M+AYNK
Sbjct: 118 MDAYNK 123
>gi|312281849|dbj|BAJ33790.1| unnamed protein product [Thellungiella halophila]
Length = 185
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/126 (70%), Positives = 102/126 (80%), Gaps = 4/126 (3%)
Query: 1 MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MK AKGK + ++E LKP +DRKVGKRKA AK +KR+ ++EK+AKKDPNKPKR P
Sbjct: 1 MKTAKGKDKVKTTKETLKPVDDRKVGKRKAPAAK---ATKRETRKEKRAKKDPNKPKRAP 57
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKK 119
SAFFVFLE+FR+TFKKENPNV AVSAVGKA G KWKSMS AEKAPYE KA K K+EY K
Sbjct: 58 SAFFVFLEDFRQTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKL 117
Query: 120 MNAYNK 125
M+AYNK
Sbjct: 118 MDAYNK 123
>gi|42572635|ref|NP_974413.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|222423104|dbj|BAH19531.1| AT3G51880 [Arabidopsis thaliana]
gi|332645335|gb|AEE78856.1| high mobility group protein B1 [Arabidopsis thaliana]
Length = 185
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/126 (71%), Positives = 102/126 (80%), Gaps = 4/126 (3%)
Query: 1 MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MK AKGK + ++EALKP +DRKVGKRKA K +KR+ ++EKKAKKDPNKPKR P
Sbjct: 1 MKTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEK---PTKRETRKEKKAKKDPNKPKRAP 57
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKK 119
SAFFVFLE+FR TFKKENPNV AVSAVGKA G KWKSMS AEKAPYE KA K K+EY K+
Sbjct: 58 SAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQ 117
Query: 120 MNAYNK 125
M+AYNK
Sbjct: 118 MDAYNK 123
>gi|334185909|ref|NP_001190062.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|332645337|gb|AEE78858.1| high mobility group protein B1 [Arabidopsis thaliana]
Length = 161
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/126 (71%), Positives = 102/126 (80%), Gaps = 4/126 (3%)
Query: 1 MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MK AKGK + ++EALKP +DRKVGKRKA K +KR+ ++EKKAKKDPNKPKR P
Sbjct: 1 MKTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEK---PTKRETRKEKKAKKDPNKPKRAP 57
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKK 119
SAFFVFLE+FR TFKKENPNV AVSAVGKA G KWKSMS AEKAPYE KA K K+EY K+
Sbjct: 58 SAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQ 117
Query: 120 MNAYNK 125
M+AYNK
Sbjct: 118 MDAYNK 123
>gi|15231065|ref|NP_190756.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|145332807|ref|NP_001078269.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|75274976|sp|O49595.1|HMGB1_ARATH RecName: Full=High mobility group B protein 1; AltName: Full=High
mobility group protein A; Short=AtHMGalpha; Short=HMG
alpha; AltName: Full=Nucleosome/chromatin assembly
factor group D 01; Short=Nucleosome/chromatin assembly
factor group D 1
gi|2832357|emb|CAA74400.1| HMG protein [Arabidopsis thaliana]
gi|3068715|gb|AAC14415.1| unknown [Arabidopsis thaliana]
gi|15912191|gb|AAL08229.1| At3g51880/ORF13 [Arabidopsis thaliana]
gi|21360557|gb|AAM47475.1| At3g51880/ORF13 [Arabidopsis thaliana]
gi|332645334|gb|AEE78855.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|332645336|gb|AEE78857.1| high mobility group protein B1 [Arabidopsis thaliana]
Length = 178
Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 90/126 (71%), Positives = 102/126 (80%), Gaps = 4/126 (3%)
Query: 1 MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MK AKGK + ++EALKP +DRKVGKRKA K +KR+ ++EKKAKKDPNKPKR P
Sbjct: 1 MKTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEKP---TKRETRKEKKAKKDPNKPKRAP 57
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKK 119
SAFFVFLE+FR TFKKENPNV AVSAVGKA G KWKSMS AEKAPYE KA K K+EY K+
Sbjct: 58 SAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQ 117
Query: 120 MNAYNK 125
M+AYNK
Sbjct: 118 MDAYNK 123
>gi|224112525|ref|XP_002316220.1| high mobility group family [Populus trichocarpa]
gi|222865260|gb|EEF02391.1| high mobility group family [Populus trichocarpa]
Length = 176
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/129 (69%), Positives = 102/129 (79%), Gaps = 3/129 (2%)
Query: 1 MKGAKGKGAARVSQ-EALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
MK AKGKG AR + E L P DRK+GKRKAA K + SK++ K+EK KKDPNKPKRP
Sbjct: 1 MKIAKGKGTARTEKKEVLLPVEDRKIGKRKAAL-KANESSKKRVKKEKITKKDPNKPKRP 59
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
PSAFFVFLEEFRK +K+E+PNV AVSAVGKA G KWKS+S AEKAPYE+KA K KS+Y K
Sbjct: 60 PSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSAAEKAPYEAKAAKRKSDYEK 119
Query: 119 KMNAYNKKQ 127
M AYNKKQ
Sbjct: 120 LMTAYNKKQ 128
>gi|224098541|ref|XP_002311212.1| high mobility group family [Populus trichocarpa]
gi|222851032|gb|EEE88579.1| high mobility group family [Populus trichocarpa]
Length = 179
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/131 (66%), Positives = 101/131 (77%), Gaps = 3/131 (2%)
Query: 1 MKGAKGKGAARVSQE--ALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
MK AKGKGAAR ++ +L DRK+GKRKAA +S KR K EK KKDP+KPKRP
Sbjct: 1 MKTAKGKGAARTEKKEVSLPVEDRKIGKRKAALKATESSKKRAAK-EKITKKDPDKPKRP 59
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
PS+FFVFLEEFRK +K+E+PN+ AVSAVGKA G KWKSMS AEKAPYE+KA KS+YGK
Sbjct: 60 PSSFFVFLEEFRKIYKQEHPNMKAVSAVGKAGGEKWKSMSAAEKAPYEAKAAIKKSDYGK 119
Query: 119 KMNAYNKKQVT 129
M AY+KKQ T
Sbjct: 120 LMTAYSKKQET 130
>gi|118484946|gb|ABK94338.1| unknown [Populus trichocarpa]
Length = 171
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/131 (66%), Positives = 101/131 (77%), Gaps = 3/131 (2%)
Query: 1 MKGAKGKGAARVSQE--ALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
MK AKGKGAAR ++ +L DRK+GKRKAA +S KR K EK KKDP+KPKRP
Sbjct: 1 MKTAKGKGAARTEKKEVSLPVEDRKIGKRKAALKATESSKKRAAK-EKITKKDPDKPKRP 59
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
PS+FFVFLEEFRK +K+E+PN+ AVSAVGKA G KWKSMS AEKAPYE+KA KS+YGK
Sbjct: 60 PSSFFVFLEEFRKIYKQEHPNMKAVSAVGKAGGEKWKSMSAAEKAPYEAKAAIKKSDYGK 119
Query: 119 KMNAYNKKQVT 129
M AY+KKQ T
Sbjct: 120 LMTAYSKKQET 130
>gi|407971018|ref|NP_001238631.1| uncharacterized protein LOC100499704 [Glycine max]
gi|255625939|gb|ACU13314.1| unknown [Glycine max]
Length = 166
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/131 (71%), Positives = 105/131 (80%), Gaps = 4/131 (3%)
Query: 1 MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MK AKGKGAAR S+E+LKP +DRKVGKRKA+ G K+EKKAKKDPNKPKRPP
Sbjct: 1 MKNAKGKGAARASKESLKPVDDRKVGKRKASG---KPGRSSAPKKEKKAKKDPNKPKRPP 57
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKK 119
SAFFVFLEEFRKTFK ENPNV AVS VGKA G KWKS+S AEKAPYESKA K K+EY K
Sbjct: 58 SAFFVFLEEFRKTFKAENPNVKAVSVVGKAGGEKWKSLSSAEKAPYESKAAKRKAEYEKL 117
Query: 120 MNAYNKKQVTN 130
+ AY+KKQ ++
Sbjct: 118 IKAYDKKQASS 128
>gi|351725417|ref|NP_001235556.1| uncharacterized protein LOC100305961 [Glycine max]
gi|255627113|gb|ACU13901.1| unknown [Glycine max]
Length = 169
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/131 (70%), Positives = 103/131 (78%), Gaps = 4/131 (3%)
Query: 1 MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MK AKGKGAAR S+E+LKP +DRKVGKRKA+ S R K+EKKAKKDPNKPKRPP
Sbjct: 1 MKTAKGKGAARPSKESLKPVDDRKVGKRKASGKPEKS---RAPKKEKKAKKDPNKPKRPP 57
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKK 119
SAF VFLEEFRKTFK ENP V AVS VGKA G KWKS+S AEKAPYE+KA K K+EY K
Sbjct: 58 SAFLVFLEEFRKTFKAENPLVKAVSVVGKAGGEKWKSLSSAEKAPYEAKAAKRKAEYEKL 117
Query: 120 MNAYNKKQVTN 130
+ AY KKQ ++
Sbjct: 118 IKAYEKKQASS 128
>gi|225448398|ref|XP_002269398.1| PREDICTED: high mobility group B protein 1 isoform 1 [Vitis
vinifera]
gi|147854340|emb|CAN83423.1| hypothetical protein VITISV_023376 [Vitis vinifera]
Length = 166
Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/129 (69%), Positives = 103/129 (79%), Gaps = 3/129 (2%)
Query: 1 MKGAKGKGAARVSQ-EALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
MK KGK AAR + EALKP DR++GKRKAA K D +K+ K+EK AKKDPNKPKRP
Sbjct: 1 MKVTKGKAAARKDKKEALKPVEDRRLGKRKAAL-KADKSTKKLAKKEKLAKKDPNKPKRP 59
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
PSAFFVFLEEFRK +K+E+PNV AVSAVGKA G KWKS+S A+KAPYE+KA K KS+Y K
Sbjct: 60 PSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAAKRKSDYEK 119
Query: 119 KMNAYNKKQ 127
M AYNKKQ
Sbjct: 120 LMAAYNKKQ 128
>gi|225448400|ref|XP_002270185.1| PREDICTED: high mobility group B protein 1 isoform 2 [Vitis
vinifera]
Length = 156
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/129 (69%), Positives = 103/129 (79%), Gaps = 3/129 (2%)
Query: 1 MKGAKGKGAARVSQ-EALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
MK KGK AAR + EALKP DR++GKRKAA K D +K+ K+EK AKKDPNKPKRP
Sbjct: 1 MKVTKGKAAARKDKKEALKPVEDRRLGKRKAAL-KADKSTKKLAKKEKLAKKDPNKPKRP 59
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
PSAFFVFLEEFRK +K+E+PNV AVSAVGKA G KWKS+S A+KAPYE+KA K KS+Y K
Sbjct: 60 PSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAAKRKSDYEK 119
Query: 119 KMNAYNKKQ 127
M AYNKKQ
Sbjct: 120 LMAAYNKKQ 128
>gi|388497798|gb|AFK36965.1| unknown [Medicago truncatula]
Length = 170
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/123 (73%), Positives = 102/123 (82%), Gaps = 4/123 (3%)
Query: 5 KGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFF 63
KGKG A+ S++ALKP +DRKVGKRKAA AK + K + +EKKAKKDPNKPKRPPSAFF
Sbjct: 3 KGKGTAKTSRDALKPVDDRKVGKRKAA-AKPEKVPKTK--KEKKAKKDPNKPKRPPSAFF 59
Query: 64 VFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
VFLE+FRKTFK ENPNV AVSAVGKA GGKWKS++ AEKAPYE+KA K K EY K M+AY
Sbjct: 60 VFLEDFRKTFKAENPNVKAVSAVGKAGGGKWKSLTKAEKAPYEAKAVKRKVEYEKLMDAY 119
Query: 124 NKK 126
N K
Sbjct: 120 NNK 122
>gi|357506009|ref|XP_003623293.1| HMG1/2-like protein [Medicago truncatula]
gi|355498308|gb|AES79511.1| HMG1/2-like protein [Medicago truncatula]
gi|388511215|gb|AFK43669.1| unknown [Medicago truncatula]
Length = 170
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/123 (73%), Positives = 101/123 (82%), Gaps = 4/123 (3%)
Query: 5 KGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFF 63
KGKG A+ S++ALKP +DRKVGKRKAA AK + K + +EKKAKKDPNKPKRPPSAFF
Sbjct: 3 KGKGTAKTSRDALKPVDDRKVGKRKAA-AKPEKVPKTK--KEKKAKKDPNKPKRPPSAFF 59
Query: 64 VFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
VFLE+FRKTFK ENPNV AVSAVGKA G KWKS++ AEKAPYE+KA K K EY K MNAY
Sbjct: 60 VFLEDFRKTFKAENPNVKAVSAVGKAGGEKWKSLTKAEKAPYEAKAAKRKVEYEKLMNAY 119
Query: 124 NKK 126
N K
Sbjct: 120 NNK 122
>gi|449521910|ref|XP_004167972.1| PREDICTED: high mobility group B protein 1-like [Cucumis sativus]
Length = 112
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/101 (75%), Positives = 85/101 (84%), Gaps = 2/101 (1%)
Query: 1 MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
MKG+KGKG +RVS+EALKP +DRKVGKRKA K D G KR K++ KAKKDPNKPKRPP
Sbjct: 1 MKGSKGKGTSRVSKEALKPVDDRKVGKRKAVV-KADKGIKRPTKKDLKAKKDPNKPKRPP 59
Query: 60 SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
SAFFVFLEEFRK +K+ENPNV AVSAVGKA G KWKS+S A
Sbjct: 60 SAFFVFLEEFRKEYKRENPNVKAVSAVGKAGGEKWKSLSHA 100
>gi|359386154|gb|AEV43366.1| group B HMG-box protein [Citrus sinensis]
Length = 165
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 95/129 (73%), Gaps = 3/129 (2%)
Query: 1 MKGAKGKGAARVSQ-EALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
MK +GKGA + + E +KP DR GKRKA S +KR K K AKKDPNKPKRP
Sbjct: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRT-KNVKSAKKDPNKPKRP 59
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
PSAFFVFLEEFRK +K+E+PNV AVSAVGKA G KWKS++ AEKAP+E+KA K K +Y K
Sbjct: 60 PSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEK 119
Query: 119 KMNAYNKKQ 127
M AYNKKQ
Sbjct: 120 LMTAYNKKQ 128
>gi|414886615|tpg|DAA62629.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 123
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 80/102 (78%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A+ +G R R+ KA+KDPNKPKRPPSAFFVF+EEFRK +K+++PNV VS +GKA G
Sbjct: 5 ARSTAGDSRLSVRKTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGG 64
Query: 92 GKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQVTNLVP 133
KWKS+S AEKAPY SKAEKLK+EY KK++AYN KQV P
Sbjct: 65 DKWKSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQVHLETP 106
>gi|414886614|tpg|DAA62628.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 118
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 80/102 (78%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A+ +G R R+ KA+KDPNKPKRPPSAFFVF+EEFRK +K+++PNV VS +GKA G
Sbjct: 5 ARSTAGDSRLSVRKTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGG 64
Query: 92 GKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQVTNLVP 133
KWKS+S AEKAPY SKAEKLK+EY KK++AYN KQV P
Sbjct: 65 DKWKSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQVHLETP 106
>gi|116778852|gb|ABK21026.1| unknown [Picea sitchensis]
gi|116782574|gb|ABK22556.1| unknown [Picea sitchensis]
gi|116782678|gb|ABK22606.1| unknown [Picea sitchensis]
gi|116782786|gb|ABK22657.1| unknown [Picea sitchensis]
gi|116782898|gb|ABK22712.1| unknown [Picea sitchensis]
gi|116791878|gb|ABK26144.1| unknown [Picea sitchensis]
gi|148907501|gb|ABR16881.1| unknown [Picea sitchensis]
gi|224284566|gb|ACN40016.1| unknown [Picea sitchensis]
gi|224285212|gb|ACN40332.1| unknown [Picea sitchensis]
gi|224286734|gb|ACN41070.1| unknown [Picea sitchensis]
Length = 157
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 92/129 (71%), Gaps = 3/129 (2%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG K K A S K ++ +GKRK A AK S RQ K+ +KA KDPNKPKRP S
Sbjct: 1 MKGGKAKNEA--SSTLKKVEEKPIGKRKTA-AKESKVSSRQEKKGRKAAKDPNKPKRPAS 57
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+E+FRKT+K++NPNV +VS VGKA G KWKSMS A+KAPY +KA K K+EY K M
Sbjct: 58 AFFVFMEDFRKTYKEKNPNVKSVSVVGKAGGDKWKSMSEADKAPYVAKAGKRKTEYEKNM 117
Query: 121 NAYNKKQVT 129
AYN KQ +
Sbjct: 118 AAYNNKQTS 126
>gi|22135473|gb|AAM93217.1|AF527616_1 nucleasome/chromatin assembly factor D protein NFD101 [Zea mays]
gi|2196672|emb|CAA70045.1| HMGd1 [Zea mays]
gi|194698578|gb|ACF83373.1| unknown [Zea mays]
gi|414886616|tpg|DAA62630.1| TPA: HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length = 126
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/96 (66%), Positives = 78/96 (81%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A+ +G R R+ KA+KDPNKPKRPPSAFFVF+EEFRK +K+++PNV VS +GKA G
Sbjct: 5 ARSTAGDSRLSVRKTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGG 64
Query: 92 GKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
KWKS+S AEKAPY SKAEKLK+EY KK++AYN KQ
Sbjct: 65 DKWKSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQ 100
>gi|414886617|tpg|DAA62631.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 119
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/96 (66%), Positives = 78/96 (81%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A+ +G R R+ KA+KDPNKPKRPPSAFFVF+EEFRK +K+++PNV VS +GKA G
Sbjct: 5 ARSTAGDSRLSVRKTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGG 64
Query: 92 GKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
KWKS+S AEKAPY SKAEKLK+EY KK++AYN KQ
Sbjct: 65 DKWKSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQ 100
>gi|162459697|ref|NP_001105649.1| HMG-like nucleosome/chromatin assembly factor D [Zea mays]
gi|17017392|gb|AAL33650.1|AF440221_1 HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length = 126
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/96 (66%), Positives = 78/96 (81%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A+ +G R R+ KA+KDPNKPKRPPSAFFVF+EEFRK +K+++PNV VS +GKA G
Sbjct: 5 ARSTAGDSRLSVRKTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSLIGKAGG 64
Query: 92 GKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
KWKS+S AEKAPY SKAEKLK+EY KK++AYN KQ
Sbjct: 65 DKWKSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQ 100
>gi|255571919|ref|XP_002526902.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223533801|gb|EEF35533.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 190
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/129 (65%), Positives = 100/129 (77%), Gaps = 3/129 (2%)
Query: 1 MKGAKGKGAARVSQ-EALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
MK KGK A+ + E LKP DRK+GKR AA K + SK+ K++K AKKDPN+PKRP
Sbjct: 1 MKVGKGKETAKKDRKEVLKPVEDRKLGKRSAAL-KPNKNSKKVTKKDKPAKKDPNRPKRP 59
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
PSAFFVFLE+FRK +K+E+PNV AVSAVGKA G KWKSMS AEK+P+E+KA K KS+Y K
Sbjct: 60 PSAFFVFLEDFRKVYKQEHPNVKAVSAVGKAGGEKWKSMSNAEKSPFEAKAAKRKSDYEK 119
Query: 119 KMNAYNKKQ 127
M AYNKKQ
Sbjct: 120 LMTAYNKKQ 128
>gi|414590133|tpg|DAA40704.1| TPA: hypothetical protein ZEAMMB73_374315 [Zea mays]
Length = 140
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 77/104 (74%)
Query: 24 VGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
VG + A+ G R R+ K +KDPNKPKRPP+AFFVF+EEFRK +K+++PNV V
Sbjct: 17 VGLEMKSRARSGGGDSRLSVRKTKVEKDPNKPKRPPTAFFVFMEEFRKDYKEKHPNVKQV 76
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
S +GKA G WKS+S AEKAPY SKAEKLK EY KKM+AYN KQ
Sbjct: 77 SVIGKAGGDMWKSLSDAEKAPYVSKAEKLKVEYTKKMDAYNNKQ 120
>gi|116790306|gb|ABK25570.1| unknown [Picea sitchensis]
gi|224286844|gb|ACN41125.1| unknown [Picea sitchensis]
gi|294461904|gb|ADE76508.1| unknown [Picea sitchensis]
Length = 151
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/131 (59%), Positives = 96/131 (73%), Gaps = 9/131 (6%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG K K +++ D+K GKRK AT D+ KRQ K+EKKAKKDPNKPKRPPS
Sbjct: 1 MKGPKAKVEQKLA------GDKKTGKRKPAT---DTQVKRQIKKEKKAKKDPNKPKRPPS 51
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVFL+EFRK +K+ NPN +VSAVGKA G KW+++S AEKAPY +KAEK K+EY K M
Sbjct: 52 AFFVFLDEFRKEYKQANPNANSVSAVGKAGGEKWRALSDAEKAPYVAKAEKKKAEYEKSM 111
Query: 121 NAYNKKQVTNL 131
YNK++ +N
Sbjct: 112 ATYNKQKDSNT 122
>gi|388522261|gb|AFK49192.1| unknown [Lotus japonicus]
Length = 173
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 95/126 (75%), Gaps = 5/126 (3%)
Query: 5 KGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFF 63
KGK A + S+E LKP +DRKVGKRKAA K D G+ + K+ KK KPKRPPSAFF
Sbjct: 3 KGKKAGKTSKEVLKPVDDRKVGKRKAAV-KPDKGTAGKAKKAKKDPN---KPKRPPSAFF 58
Query: 64 VFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
VFLE+FRKTFK ENPNV VSAVGKA G KWKS++ AEKAPYE+KA K K+EY K +NAY
Sbjct: 59 VFLEDFRKTFKAENPNVKGVSAVGKAGGEKWKSLTKAEKAPYEAKAAKRKAEYEKLINAY 118
Query: 124 NKKQVT 129
N KQ +
Sbjct: 119 NNKQAS 124
>gi|388497528|gb|AFK36830.1| unknown [Medicago truncatula]
Length = 155
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/128 (60%), Positives = 90/128 (70%), Gaps = 10/128 (7%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKGAK KG ++ + L V K+ AA K G ++ K K KDPNKPKRPPS
Sbjct: 1 MKGAKSKGESKKADAKLA-----VNKKGAAATK---GGRKPAKG--KEPKDPNKPKRPPS 50
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+E+FRK FKK+NP+ AVSAVGKAAG KWKS+S AEKAPY +KAEK K+EY K M
Sbjct: 51 AFFVFMEDFRKQFKKDNPDNKAVSAVGKAAGAKWKSLSEAEKAPYAAKAEKRKAEYEKTM 110
Query: 121 NAYNKKQV 128
AYNKKQ
Sbjct: 111 KAYNKKQA 118
>gi|238013344|gb|ACR37707.1| unknown [Zea mays]
gi|414590135|tpg|DAA40706.1| TPA: HMG1/2-like protein [Zea mays]
Length = 127
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 74/96 (77%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A+ G R R+ K +KDPNKPKRPP+AFFVF+EEFRK +K+++PNV VS +GKA G
Sbjct: 5 ARSGGGDSRLSVRKTKVEKDPNKPKRPPTAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGG 64
Query: 92 GKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
WKS+S AEKAPY SKAEKLK EY KKM+AYN KQ
Sbjct: 65 DMWKSLSDAEKAPYVSKAEKLKVEYTKKMDAYNNKQ 100
>gi|115480551|ref|NP_001063869.1| Os09g0551600 [Oryza sativa Japonica Group]
gi|50726318|dbj|BAD33893.1| putative HMGd1 [Oryza sativa Japonica Group]
gi|113632102|dbj|BAF25783.1| Os09g0551600 [Oryza sativa Japonica Group]
gi|213959176|gb|ACJ54922.1| HMG type nucleosome/chromatin assembly factor [Oryza sativa
Japonica Group]
gi|215694881|dbj|BAG90072.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 127
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 79/99 (79%)
Query: 30 ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
A ++ +G R R+ KA+KDPNKPKRPPSAFFVF+E+FRK +K+++PNV VS +GKA
Sbjct: 3 ARSRSSNGDSRLSVRKTKAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKA 62
Query: 90 AGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQV 128
G KWKSM+ A+KAP+ +KAEKLK+EY KK++AYN KQ
Sbjct: 63 GGDKWKSMTDADKAPFVTKAEKLKAEYTKKIDAYNNKQA 101
>gi|414590134|tpg|DAA40705.1| TPA: hypothetical protein ZEAMMB73_374315 [Zea mays]
Length = 120
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 74/96 (77%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A+ G R R+ K +KDPNKPKRPP+AFFVF+EEFRK +K+++PNV VS +GKA G
Sbjct: 5 ARSGGGDSRLSVRKTKVEKDPNKPKRPPTAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGG 64
Query: 92 GKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
WKS+S AEKAPY SKAEKLK EY KKM+AYN KQ
Sbjct: 65 DMWKSLSDAEKAPYVSKAEKLKVEYTKKMDAYNNKQ 100
>gi|2894109|emb|CAA05365.1| high mobility group protein [Solanum tuberosum]
Length = 141
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/126 (56%), Positives = 86/126 (68%), Gaps = 19/126 (15%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKGAK K A D K+G RK AT + K+ K A KDPNKPKRPPS
Sbjct: 1 MKGAKSKAKA----------DTKLGVRKKAT---------ESKKAKNAAKDPNKPKRPPS 41
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+EEFRKT+K+++PN +V+ VGKA G KWK +S EKAPY++KAEK K+EY K M
Sbjct: 42 AFFVFMEEFRKTYKEKHPNNKSVAVVGKAGGDKWKQLSDEEKAPYQAKAEKRKAEYQKNM 101
Query: 121 NAYNKK 126
+AYNKK
Sbjct: 102 DAYNKK 107
>gi|388497036|gb|AFK36584.1| unknown [Medicago truncatula]
Length = 155
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 87/128 (67%), Gaps = 10/128 (7%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKGAK KG ++ + L N +K A A +GK K DPNKPKRPPS
Sbjct: 1 MKGAKSKGESKKADAKLAVN------KKGAVATKGGRKPAKGKEPK----DPNKPKRPPS 50
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+E+FRK FKK+NP+ AVSAVGKAAG KWKS+S AEKAPY +KAEK K+EY K M
Sbjct: 51 AFFVFMEDFRKQFKKDNPDNKAVSAVGKAAGAKWKSLSEAEKAPYAAKAEKRKAEYEKTM 110
Query: 121 NAYNKKQV 128
AYNKKQ
Sbjct: 111 KAYNKKQA 118
>gi|226505018|ref|NP_001151148.1| LOC100284781 [Zea mays]
gi|195644628|gb|ACG41782.1| HMG1/2-like protein [Zea mays]
Length = 127
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 73/96 (76%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A+ G R R+ K +KDPNKPKRPP+ FFVF+EEFRK +K+++PNV VS +GKA G
Sbjct: 5 ARSGGGDSRLSVRKTKVEKDPNKPKRPPTTFFVFMEEFRKDYKEKHPNVKQVSVIGKAGG 64
Query: 92 GKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
WKS+S AEKAPY SKAEKLK EY KKM+AYN KQ
Sbjct: 65 DMWKSLSDAEKAPYVSKAEKLKVEYTKKMDAYNNKQ 100
>gi|106879575|emb|CAJ38371.1| HMG-protein [Plantago major]
Length = 212
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/123 (72%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Query: 6 GKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFV 64
G+ A V +E LKP +DRKVGKRKAA A K K++KKAKKDPNKPKRPPSAFFV
Sbjct: 51 GRSKAAVRKETLKPVDDRKVGKRKAAAAP--KVKKPAAKKDKKAKKDPNKPKRPPSAFFV 108
Query: 65 FLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYN 124
FLEEFR+TFKKENPN+ AVSAVGKA G KWKS++ AEKAPYE+KA K KSEY K MNAYN
Sbjct: 109 FLEEFRQTFKKENPNIKAVSAVGKAGGEKWKSLTDAEKAPYEAKAAKRKSEYEKLMNAYN 168
Query: 125 KKQ 127
KKQ
Sbjct: 169 KKQ 171
>gi|388504718|gb|AFK40425.1| unknown [Lotus japonicus]
Length = 152
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/82 (76%), Positives = 68/82 (82%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
KA KDPNKPKRPPSAFFVF+E+FRK F KENP AVSAVGKAAG KWKSMS AEKAPY
Sbjct: 36 KAAKDPNKPKRPPSAFFVFMEDFRKIFNKENPENKAVSAVGKAAGAKWKSMSEAEKAPYV 95
Query: 107 SKAEKLKSEYGKKMNAYNKKQV 128
+KAEK K++Y K M AYNKKQ
Sbjct: 96 AKAEKRKADYEKTMKAYNKKQA 117
>gi|356508616|ref|XP_003523051.1| PREDICTED: HMG1/2-like protein-like [Glycine max]
Length = 152
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 68/82 (82%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
KA KDPNKPKRPPSAFFVF+EEFRK F KE+P+ AVSAVGKAAG KWK+MS AEKAPY
Sbjct: 36 KAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPDNKAVSAVGKAAGAKWKTMSDAEKAPYV 95
Query: 107 SKAEKLKSEYGKKMNAYNKKQV 128
+K+EK K EY K M AYNKKQ
Sbjct: 96 AKSEKRKVEYEKNMRAYNKKQA 117
>gi|351725567|ref|NP_001236841.1| HMG1/2-like protein [Glycine max]
gi|123379|sp|P26585.1|HMGL_SOYBN RecName: Full=HMG1/2-like protein; AltName: Full=Protein SB11
gi|18645|emb|CAA41200.1| HMG-1 like protein gene [Glycine max]
Length = 152
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 67/82 (81%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
KA KDPNKPKRPPSAFFVF+EEFRK F KE+P AVSAVGKAAG KWK+MS AEKAPY
Sbjct: 36 KAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYV 95
Query: 107 SKAEKLKSEYGKKMNAYNKKQV 128
+K+EK K EY K M AYNKKQ
Sbjct: 96 AKSEKRKVEYEKNMRAYNKKQA 117
>gi|359481661|ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-like [Vitis vinifera]
gi|147815135|emb|CAN74566.1| hypothetical protein VITISV_023651 [Vitis vinifera]
gi|297740214|emb|CBI30396.3| unnamed protein product [Vitis vinifera]
Length = 168
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/129 (75%), Positives = 107/129 (82%), Gaps = 3/129 (2%)
Query: 1 MKGAKGKGAARV-SQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
MK AKGKGAAR ++EALKP DRK+GKRKAA K + SKR ++KKAKKDPNKPKRP
Sbjct: 1 MKAAKGKGAARRDTKEALKPAEDRKIGKRKAAV-KAEKSSKRATTKDKKAKKDPNKPKRP 59
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
PSAFFVFLEEFRK FKKENPNV AVSAVGKA G +WKS+S AEKAPYE+KA K K+EY K
Sbjct: 60 PSAFFVFLEEFRKVFKKENPNVKAVSAVGKAGGERWKSLSEAEKAPYEAKAAKKKAEYEK 119
Query: 119 KMNAYNKKQ 127
MNAYNKKQ
Sbjct: 120 IMNAYNKKQ 128
>gi|312282031|dbj|BAJ33881.1| unnamed protein product [Thellungiella halophila]
Length = 141
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 70/82 (85%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K A KDPNKPKRP SAFFVF+EEFR+T+KKE+PN +V+AVGKA G KWKS+S +EKAPY
Sbjct: 26 KGAAKDPNKPKRPASAFFVFMEEFRETYKKEHPNNKSVAAVGKAGGQKWKSLSDSEKAPY 85
Query: 106 ESKAEKLKSEYGKKMNAYNKKQ 127
++KA+K K EY K MNAYNKKQ
Sbjct: 86 QAKADKRKVEYEKNMNAYNKKQ 107
>gi|449455609|ref|XP_004145545.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|449511984|ref|XP_004164108.1| PREDICTED: HMG1/2-like protein-like isoform 1 [Cucumis sativus]
gi|449511988|ref|XP_004164109.1| PREDICTED: HMG1/2-like protein-like isoform 2 [Cucumis sativus]
Length = 146
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/79 (75%), Positives = 65/79 (82%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SAFFVF+EEFRK F +ENPN AVSAVGKAAG KWKSMS AEKAPY +KA+
Sbjct: 35 DPNKPKRPASAFFVFMEEFRKKFNEENPNNKAVSAVGKAAGQKWKSMSDAEKAPYIAKAD 94
Query: 111 KLKSEYGKKMNAYNKKQVT 129
K K EY K M AYNKKQ +
Sbjct: 95 KRKVEYEKNMKAYNKKQAS 113
>gi|295913526|gb|ADG58011.1| transcription factor [Lycoris longituba]
Length = 171
Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 64/77 (83%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPNKPKRPPSAFFVF+EEFRK FK++NPN VS VGKAAG KWKSMS EKAPYE+KA
Sbjct: 54 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 113
Query: 110 EKLKSEYGKKMNAYNKK 126
K K+EY K M AYNKK
Sbjct: 114 AKRKAEYNKTMVAYNKK 130
>gi|295913708|gb|ADG58095.1| transcription factor [Lycoris longituba]
Length = 190
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 64/77 (83%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPNKPKRPPSAFFVF+EEFRK FK++NPN VS VGKAAG KWKSMS EKAPYE+KA
Sbjct: 69 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 128
Query: 110 EKLKSEYGKKMNAYNKK 126
K K+EY K M AYNKK
Sbjct: 129 AKRKAEYNKTMVAYNKK 145
>gi|295913458|gb|ADG57979.1| transcription factor [Lycoris longituba]
Length = 179
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 64/77 (83%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPNKPKRPPSAFFVF+EEFRK FK++NPN VS VGKAAG KWKSMS EKAPYE+KA
Sbjct: 59 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 118
Query: 110 EKLKSEYGKKMNAYNKK 126
K K+EY K M AYNKK
Sbjct: 119 AKRKAEYNKTMVAYNKK 135
>gi|295913700|gb|ADG58091.1| transcription factor [Lycoris longituba]
Length = 162
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 64/77 (83%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPNKPKRPPSAFFVF+EEFRK FK++NPN VS VGKAAG KWKSMS EKAPYE+KA
Sbjct: 41 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 100
Query: 110 EKLKSEYGKKMNAYNKK 126
K K+EY K M AYNKK
Sbjct: 101 AKRKAEYNKTMVAYNKK 117
>gi|295913475|gb|ADG57987.1| transcription factor [Lycoris longituba]
Length = 162
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 64/77 (83%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPNKPKRPPSAFFVF+EEFRK FK++NPN VS VGKAAG KWKSMS EKAPYE+KA
Sbjct: 41 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 100
Query: 110 EKLKSEYGKKMNAYNKK 126
K K+EY K M AYNKK
Sbjct: 101 AKRKAEYNKTMVAYNKK 117
>gi|295913196|gb|ADG57857.1| transcription factor [Lycoris longituba]
Length = 143
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 68/79 (86%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
KA KDPNKPKRPPSAFFVF+E FRK FK +NP +++AVGKA G +WKSMS +EKAP+
Sbjct: 25 KAGKDPNKPKRPPSAFFVFMEGFRKEFKDKNPKNKSIAAVGKAGGERWKSMSDSEKAPFV 84
Query: 107 SKAEKLKSEYGKKMNAYNK 125
SKAEKLK+EYGKKMNA+NK
Sbjct: 85 SKAEKLKAEYGKKMNAHNK 103
>gi|357159916|ref|XP_003578598.1| PREDICTED: HMG1/2-like protein-like [Brachypodium distachyon]
Length = 128
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 72/91 (79%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
G R R+ KA+KDPN+PKRPPSAFFVF+E FRK +K+++P+V VS VGKA G +WKS
Sbjct: 10 GDSRLSVRKTKAEKDPNQPKRPPSAFFVFMEGFRKDYKEKHPDVKQVSVVGKAGGAEWKS 69
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
+S AEKAP+ +KAEKLK+EY KKM AYN Q
Sbjct: 70 LSDAEKAPFVAKAEKLKAEYNKKMVAYNNPQ 100
>gi|148250187|gb|ABQ53545.1| HMG1 protein [Arachis diogoi]
Length = 141
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 65/81 (80%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYES 107
A KDPNKPKRPPSAFFVF+EEFRK F K++P AVSAVGKAAG KWK MS AEKAPY +
Sbjct: 26 AAKDPNKPKRPPSAFFVFMEEFRKQFNKDHPENKAVSAVGKAAGAKWKQMSDAEKAPYVA 85
Query: 108 KAEKLKSEYGKKMNAYNKKQV 128
K+EK K +Y K M AYNKKQ
Sbjct: 86 KSEKRKQDYEKNMRAYNKKQA 106
>gi|436424|emb|CAA54168.1| HMG 1 protein [Pisum sativum]
Length = 154
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 66/79 (83%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPNKPKRPPSAFFVF+E+FRK FKK N + AVSAVGKAAG KWKSM+ AEKAPY +KA
Sbjct: 40 KDPNKPKRPPSAFFVFMEDFRKQFKKGNADNKAVSAVGKAAGAKWKSMTEAEKAPYAAKA 99
Query: 110 EKLKSEYGKKMNAYNKKQV 128
EK K+EY K M +YNKKQ
Sbjct: 100 EKRKAEYEKSMKSYNKKQA 118
>gi|125564627|gb|EAZ10007.1| hypothetical protein OsI_32309 [Oryza sativa Indica Group]
Length = 139
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 79/110 (71%), Gaps = 12/110 (10%)
Query: 30 ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
A ++ +G R R+ KA+KDPNKPKRPPSAFFVF+E+FRK +K+++PNV VS +GKA
Sbjct: 3 ARSRSSNGDSRLSVRKTKAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKA 62
Query: 90 AGGKWKSMSPA------------EKAPYESKAEKLKSEYGKKMNAYNKKQ 127
G KWKSM+ A +KAP+ +KAEKLK+EY KK++AYN KQ
Sbjct: 63 GGDKWKSMTDAIGGYVVVAVPCKDKAPFVTKAEKLKAEYTKKIDAYNNKQ 112
>gi|2196548|gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum]
Length = 142
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 68/80 (85%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRPPSAFFVF+EEFRKT+K+++PN +V+AVGKA G WK +S AEKAPY++KAE
Sbjct: 32 DPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAAVGKAGGDAWKKLSEAEKAPYQAKAE 91
Query: 111 KLKSEYGKKMNAYNKKQVTN 130
K K+EY K M+AYN+KQ +
Sbjct: 92 KRKAEYQKNMDAYNRKQAGD 111
>gi|222642048|gb|EEE70180.1| hypothetical protein OsJ_30257 [Oryza sativa Japonica Group]
Length = 139
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 79/110 (71%), Gaps = 12/110 (10%)
Query: 30 ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
A ++ +G R R+ KA+KDPNKPKRPPSAFFVF+E+FRK +K+++PNV VS +GKA
Sbjct: 3 ARSRSSNGDSRLSVRKTKAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKA 62
Query: 90 AGGKWKSMSPA------------EKAPYESKAEKLKSEYGKKMNAYNKKQ 127
G KWKSM+ A +KAP+ +KAEKLK+EY KK++AYN KQ
Sbjct: 63 GGDKWKSMTDAIRGYVVVAVPCKDKAPFVTKAEKLKAEYTKKIDAYNNKQ 112
>gi|729736|sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein
Length = 144
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 70/85 (82%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K+ KKA KDPNKPKRPPSAFFVF+E+FRKT+K+++PN +V+ VGKA G KWK ++ AEK
Sbjct: 24 KKTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEK 83
Query: 103 APYESKAEKLKSEYGKKMNAYNKKQ 127
AP+ SKAEK K EY K + AYNKKQ
Sbjct: 84 APFISKAEKRKQEYEKNLQAYNKKQ 108
>gi|295913696|gb|ADG58089.1| transcription factor [Lycoris longituba]
Length = 183
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/76 (76%), Positives = 63/76 (82%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRPPSAFFVF+EEFRK FK++NPN VS VGKAAG KWKSMS AEKAPYE+KA
Sbjct: 63 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAA 122
Query: 111 KLKSEYGKKMNAYNKK 126
K K +Y K M AYNKK
Sbjct: 123 KRKVDYNKTMVAYNKK 138
>gi|1052956|gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]
Length = 146
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 72/88 (81%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+ K+ KK+ KDPNKPKRPPSAFFVF+E+FRKT+K+++PN +V+AVGKA G KWK ++ A
Sbjct: 22 ETKKSKKSVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAAVGKAGGDKWKQLTDA 81
Query: 101 EKAPYESKAEKLKSEYGKKMNAYNKKQV 128
EKAP+ +KAEK K EY K M AYN+KQ
Sbjct: 82 EKAPFIAKAEKRKQEYEKSMQAYNRKQA 109
>gi|295913393|gb|ADG57949.1| transcription factor [Lycoris longituba]
Length = 162
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/76 (76%), Positives = 63/76 (82%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRPPSAFFVF+EEFRK FK++NPN VS VGKAAG KWKSMS AEKAPYE+KA
Sbjct: 42 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAA 101
Query: 111 KLKSEYGKKMNAYNKK 126
K K +Y K M AYNKK
Sbjct: 102 KRKVDYNKTMVAYNKK 117
>gi|295913307|gb|ADG57910.1| transcription factor [Lycoris longituba]
Length = 138
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/76 (76%), Positives = 63/76 (82%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRPPSAFFVF+EEFRK FK++NPN VS VGKAAG KWKSMS AEKAPYE+KA
Sbjct: 18 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAA 77
Query: 111 KLKSEYGKKMNAYNKK 126
K K +Y K M AYNKK
Sbjct: 78 KRKVDYNKTMVAYNKK 93
>gi|115470082|ref|NP_001058640.1| Os06g0728000 [Oryza sativa Japonica Group]
gi|3885888|gb|AAC78104.1| high mobility group protein [Oryza sativa Japonica Group]
gi|23345287|gb|AAN28722.1| HMG1 protein [Oryza sativa Indica Group]
gi|30267833|gb|AAP21609.1| HMGB1 [Oryza sativa Indica Group]
gi|54291150|dbj|BAD61823.1| HMGB1 [Oryza sativa Japonica Group]
gi|113596680|dbj|BAF20554.1| Os06g0728000 [Oryza sativa Japonica Group]
gi|213959190|gb|ACJ54929.1| HMG protein [Oryza sativa Japonica Group]
gi|215692803|dbj|BAG88247.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636260|gb|EEE66392.1| hypothetical protein OsJ_22728 [Oryza sativa Japonica Group]
Length = 157
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 87/129 (67%), Gaps = 13/129 (10%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKGAK KGAA KP+ + K K A G R+ KA KDPNKPKR PS
Sbjct: 1 MKGAKSKGAA-------KPDAKLAVKSKGAEKPAAKG------RKGKAGKDPNKPKRAPS 47
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+EEFRK FK++NP +V+AVGKAAG +WKS++ A+KAPY +KA KLK+EY K +
Sbjct: 48 AFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYVAKANKLKAEYNKAI 107
Query: 121 NAYNKKQVT 129
AYNK + T
Sbjct: 108 AAYNKGEST 116
>gi|312281681|dbj|BAJ33706.1| unnamed protein product [Thellungiella halophila]
Length = 144
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/83 (71%), Positives = 68/83 (81%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R K A KDPNKPKRP SAFFVF+E+FR+TFKKE+P +V+AVGKAAG KWKS+S AEKA
Sbjct: 27 RSKAAAKDPNKPKRPASAFFVFMEDFRETFKKEHPKNKSVAAVGKAAGDKWKSLSDAEKA 86
Query: 104 PYESKAEKLKSEYGKKMNAYNKK 126
PY +KAEK K +Y K M AYNKK
Sbjct: 87 PYVAKAEKRKVDYEKNMKAYNKK 109
>gi|413935042|gb|AFW69593.1| high mobility group protein1 [Zea mays]
Length = 220
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 86/133 (64%), Gaps = 22/133 (16%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGK----REKKAKKDPNKPK 56
MKGAK KGAA+ A AKL SK K R+ KA KDPNKPK
Sbjct: 1 MKGAKSKGAAK------------------ADAKLAVKSKGAEKPAKGRKGKAGKDPNKPK 42
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
R PSAFFVF+EEFRK FK++NP +V+AVGKAAG +WKS+S ++KAPY +KA KLK EY
Sbjct: 43 RAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEY 102
Query: 117 GKKMNAYNKKQVT 129
K + AYNK + T
Sbjct: 103 NKAIAAYNKGEST 115
>gi|449456873|ref|XP_004146173.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|449495123|ref|XP_004159740.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|63020536|gb|AAY26151.1| high mobility group protein [Cucumis sativus]
Length = 146
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 64/76 (84%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SAFFVF+EEFRK +KKE+PN +V+AVGKA G KWKSMS AEKAPY +KAE
Sbjct: 34 DPNKPKRPASAFFVFMEEFRKQYKKEHPNNKSVAAVGKAGGDKWKSMSDAEKAPYINKAE 93
Query: 111 KLKSEYGKKMNAYNKK 126
K K+EY K M AYNK+
Sbjct: 94 KRKTEYNKSMQAYNKR 109
>gi|359486418|ref|XP_003633441.1| PREDICTED: high mobility group B protein 1 [Vitis vinifera]
Length = 151
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 91/129 (70%), Gaps = 18/129 (13%)
Query: 1 MKGAKGKGAARVSQ-EALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
MK KGK AAR + EALKP DR++GKRKAA K D +K+ K+EK AKKDPNKPKRP
Sbjct: 1 MKVTKGKAAARKDKKEALKPVEDRRLGKRKAAL-KADKSTKKLAKKEKLAKKDPNKPKRP 59
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
PSAFFVFLEEFRK +K+E+PNV AVS A+KAPYE+KA K KS+Y K
Sbjct: 60 PSAFFVFLEEFRKVYKQEHPNVKAVS---------------ADKAPYEAKAAKRKSDYEK 104
Query: 119 KMNAYNKKQ 127
M AYNKKQ
Sbjct: 105 LMAAYNKKQ 113
>gi|224081483|ref|XP_002306429.1| high mobility group family [Populus trichocarpa]
gi|222855878|gb|EEE93425.1| high mobility group family [Populus trichocarpa]
Length = 144
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 79/109 (72%), Gaps = 5/109 (4%)
Query: 23 KVGKRKAATAKLDSGSKRQG-----KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKEN 77
K G+ K+ + D+ KR+G K KKA KDPNKPKRP SAFFVF+E+FRK +K+ +
Sbjct: 2 KGGRSKSDSRNNDAKLKRKGAGAGTKASKKAAKDPNKPKRPASAFFVFMEDFRKQYKESH 61
Query: 78 PNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
PN +V+AVGKA G KWKS+S AEKAPY +KAEK K EY K M AYNK+
Sbjct: 62 PNNKSVAAVGKAGGDKWKSLSEAEKAPYAAKAEKRKFEYNKDMAAYNKR 110
>gi|194466165|gb|ACF74313.1| high mobility group protein 2 [Arachis hypogaea]
Length = 153
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 64/81 (79%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYES 107
A KDPNK KRPPSAFFVF+EEFRK F K++P AVSAVGKAAG KWK MS AEKAPY +
Sbjct: 38 AAKDPNKLKRPPSAFFVFMEEFRKQFNKDHPENKAVSAVGKAAGAKWKQMSDAEKAPYVA 97
Query: 108 KAEKLKSEYGKKMNAYNKKQV 128
K+EK K +Y K M AYNKKQ
Sbjct: 98 KSEKRKQDYEKNMRAYNKKQA 118
>gi|79318295|ref|NP_001031075.1| high mobility group B3 protein [Arabidopsis thaliana]
gi|332191889|gb|AEE30010.1| high mobility group B3 protein [Arabidopsis thaliana]
Length = 147
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 75/109 (68%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
S +K+ K K A KDPNKPKRP SAFFVF+E+FR T+K+E+P +V+AVGKA G KWK
Sbjct: 16 SVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWK 75
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQVTNLVPFFNSVDAFGSL 144
S+S +EKAPY +KA+K K EY K M AYNKK V L N F L
Sbjct: 76 SLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLVIALRKMRNLTSQFQRL 124
>gi|116781378|gb|ABK22074.1| unknown [Picea sitchensis]
gi|224284710|gb|ACN40086.1| unknown [Picea sitchensis]
Length = 154
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
+KRQ K KA KDPN+PKRPP+AFFV+LEEFRKTFK+++P+V V+AVGKA G KWK M
Sbjct: 33 NKRQAK--PKAVKDPNQPKRPPTAFFVYLEEFRKTFKQKHPDVKGVTAVGKACGDKWKEM 90
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
S AEKAPY +KA + ++EY M AY KKQ
Sbjct: 91 SEAEKAPYLAKAAQKRAEYDVTMTAYKKKQ 120
>gi|8886929|gb|AAF80615.1|AC069251_8 F2D10.18 [Arabidopsis thaliana]
Length = 662
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 67/83 (80%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R K A KDPNKPKRP SAFFVF+E+FR+TFKKENP +V+ VGKAAG KWKS+S +EKA
Sbjct: 404 RGKAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKA 463
Query: 104 PYESKAEKLKSEYGKKMNAYNKK 126
PY +KAEK K EY K + AYNKK
Sbjct: 464 PYVAKAEKRKVEYEKNIKAYNKK 486
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 82/119 (68%), Gaps = 4/119 (3%)
Query: 8 GAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLE 67
G+ VS+ +K K R + KL S +K+ K K A KDPNKPKRP SAFFVF+E
Sbjct: 513 GSEEVSESIMKGAKSKAETR---STKL-SVTKKPAKGAKGAAKDPNKPKRPSSAFFVFME 568
Query: 68 EFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
+FR T+K+E+P +V+AVGKA G KWKS+S +EKAPY +KA+K K EY K M AYNKK
Sbjct: 569 DFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKK 627
>gi|168032698|ref|XP_001768855.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168032700|ref|XP_001768856.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679967|gb|EDQ66408.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679968|gb|EDQ66409.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 110
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 64/78 (82%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PKRPP+AFF+FL EFR+ FK+ENPNV V+AVGKA G KWKSMS AEK P+ +KA
Sbjct: 7 KDPNAPKRPPTAFFIFLNEFREVFKRENPNVKGVTAVGKAGGEKWKSMSEAEKQPFMTKA 66
Query: 110 EKLKSEYGKKMNAYNKKQ 127
+ KSEY K ++AYNKKQ
Sbjct: 67 VQKKSEYDKTISAYNKKQ 84
>gi|397396|emb|CAA46876.1| DNA-binding protein [Zea mays]
Length = 168
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/129 (53%), Positives = 85/129 (65%), Gaps = 14/129 (10%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKGAK KGAA+ D K+ + K G R+ KA KDPNKPKR PS
Sbjct: 12 MKGAKSKGAAKA--------DAKLAVKSKGAEKPAKG------RKGKAGKDPNKPKRAPS 57
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+EEFRK FK++NP +V+AVGKAAG +WKS+S ++KAPY +KA KLK EY K +
Sbjct: 58 AFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAI 117
Query: 121 NAYNKKQVT 129
AYNK + T
Sbjct: 118 AAYNKGEST 126
>gi|79318286|ref|NP_001031074.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|297845040|ref|XP_002890401.1| hypothetical protein ARALYDRAFT_472301 [Arabidopsis lyrata subsp.
lyrata]
gi|297336243|gb|EFH66660.1| hypothetical protein ARALYDRAFT_472301 [Arabidopsis lyrata subsp.
lyrata]
gi|332191886|gb|AEE30007.1| high mobility group B2 protein [Arabidopsis thaliana]
Length = 142
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 67/83 (80%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R K A KDPNKPKRP SAFFVF+E+FR+TFKKENP +V+ VGKAAG KWKS+S +EKA
Sbjct: 27 RGKAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKA 86
Query: 104 PYESKAEKLKSEYGKKMNAYNKK 126
PY +KAEK K EY K + AYNKK
Sbjct: 87 PYVAKAEKRKVEYEKNIKAYNKK 109
>gi|47027098|gb|AAT08762.1| HMG transcription factor [Hyacinthus orientalis]
Length = 158
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 65/78 (83%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPNKPKRPPSAFFVF+E+FRK FK++NPN VS VGKA GKWK+MS AEKAP+E++A
Sbjct: 38 KDPNKPKRPPSAFFVFMEDFRKQFKEKNPNNKQVSVVGKACWGKWKTMSAAEKAPFEARA 97
Query: 110 EKLKSEYGKKMNAYNKKQ 127
K K++Y K M AYNKKQ
Sbjct: 98 AKRKADYNKVMVAYNKKQ 115
>gi|308569654|gb|ADO34793.1| high mobility group box 2 protein [Gossypium hirsutum]
Length = 146
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 75/106 (70%), Gaps = 3/106 (2%)
Query: 26 KRKAATAKLDSGSK---RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA 82
K A +AKL K + GK+ KA KDPNKPKRP SAFFVF+EEFR+ +KKE+P +
Sbjct: 7 KSDAKSAKLSVNKKSTTKAGKKSGKAAKDPNKPKRPASAFFVFMEEFREQYKKEHPKNKS 66
Query: 83 VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQV 128
V+AVGKA G KWKS+S AEK PY KAEK K EY K M AYNK+Q
Sbjct: 67 VAAVGKAGGDKWKSLSEAEKRPYVDKAEKRKVEYEKNMKAYNKRQA 112
>gi|293335943|ref|NP_001167650.1| high mobility group protein1 [Zea mays]
gi|123378|sp|P27347.1|MNB1B_MAIZE RecName: Full=DNA-binding protein MNB1B; AltName: Full=HMG1-like
protein
gi|22329|emb|CAA41220.1| high mobility group protein [Zea mays]
gi|5441502|emb|CAB46752.1| HMGa protein [Zea mays]
gi|22347617|gb|AAM95942.1| nucleosome/chromatin assembly factor group D protein [Zea mays]
gi|194701148|gb|ACF84658.1| unknown [Zea mays]
gi|194702316|gb|ACF85242.1| unknown [Zea mays]
gi|194703290|gb|ACF85729.1| unknown [Zea mays]
gi|195606194|gb|ACG24927.1| DNA-binding protein MNB1B [Zea mays]
gi|195612638|gb|ACG28149.1| DNA-binding protein MNB1B [Zea mays]
gi|195618138|gb|ACG30899.1| DNA-binding protein MNB1B [Zea mays]
gi|195618904|gb|ACG31282.1| DNA-binding protein MNB1B [Zea mays]
gi|195619012|gb|ACG31336.1| DNA-binding protein MNB1B [Zea mays]
gi|195619124|gb|ACG31392.1| DNA-binding protein MNB1B [Zea mays]
gi|195638824|gb|ACG38880.1| DNA-binding protein MNB1B [Zea mays]
gi|195642004|gb|ACG40470.1| DNA-binding protein MNB1B [Zea mays]
gi|223972731|gb|ACN30553.1| unknown [Zea mays]
gi|223972797|gb|ACN30586.1| unknown [Zea mays]
gi|223973279|gb|ACN30827.1| unknown [Zea mays]
gi|223974975|gb|ACN31675.1| unknown [Zea mays]
gi|413935043|gb|AFW69594.1| high mobility group protein1 [Zea mays]
Length = 157
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/129 (53%), Positives = 85/129 (65%), Gaps = 14/129 (10%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKGAK KGAA+ D K+ + K G R+ KA KDPNKPKR PS
Sbjct: 1 MKGAKSKGAAKA--------DAKLAVKSKGAEKPAKG------RKGKAGKDPNKPKRAPS 46
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+EEFRK FK++NP +V+AVGKAAG +WKS+S ++KAPY +KA KLK EY K +
Sbjct: 47 AFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAI 106
Query: 121 NAYNKKQVT 129
AYNK + T
Sbjct: 107 AAYNKGEST 115
>gi|296088654|emb|CBI37645.3| unnamed protein product [Vitis vinifera]
Length = 154
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 85/126 (67%), Gaps = 10/126 (7%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG K K A +K D K+ +K A + K+ K+EK A KDPNKPKRP S
Sbjct: 1 MKGGKSKAAE------VKRADSKLSVKKKGAAAV---GKKTAKKEK-AVKDPNKPKRPAS 50
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+EEFRK +K+++P +VS VGKA G KWKS+S AEKAPY +KAEK K+EY K M
Sbjct: 51 AFFVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSM 110
Query: 121 NAYNKK 126
AYNK+
Sbjct: 111 QAYNKR 116
>gi|168028752|ref|XP_001766891.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681870|gb|EDQ68293.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/129 (53%), Positives = 83/129 (64%), Gaps = 7/129 (5%)
Query: 2 KGAKGKGAA---RVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
KG KG GA V ++ K D+ + KRK + K + + K KDPN PKRP
Sbjct: 5 KGKKGVGAVAKRDVKEKVTKVQDKDIKKRKGPVKE----PKGRKAKSAKKAKDPNAPKRP 60
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
+AFF+FL EFR+ FKKENPNV V+AVGKA G KWKSMS AEK PY KA + KSEY K
Sbjct: 61 ATAFFIFLNEFREVFKKENPNVKGVAAVGKAGGEKWKSMSEAEKQPYMQKAVQKKSEYDK 120
Query: 119 KMNAYNKKQ 127
++AYNKKQ
Sbjct: 121 TLSAYNKKQ 129
>gi|18394898|ref|NP_564123.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|75219648|sp|O49596.1|HMGB2_ARATH RecName: Full=High mobility group B protein 2; AltName: Full=High
mobility group protein B 1; Short=AtHMGbeta1; Short=HMG
beta 1; AltName: Full=Nucleosome/chromatin assembly
factor group D 02; Short=Nucleosome/chromatin assembly
factor group D 2
gi|13877971|gb|AAK44063.1|AF370248_1 unknown protein [Arabidopsis thaliana]
gi|2832359|emb|CAA74401.1| HMG protein [Arabidopsis thaliana]
gi|17104699|gb|AAL34238.1| unknown protein [Arabidopsis thaliana]
gi|21536964|gb|AAM61305.1| unknown [Arabidopsis thaliana]
gi|26452113|dbj|BAC43146.1| unknown protein [Arabidopsis thaliana]
gi|225897948|dbj|BAH30306.1| hypothetical protein [Arabidopsis thaliana]
gi|332191885|gb|AEE30006.1| high mobility group B2 protein [Arabidopsis thaliana]
Length = 144
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 67/83 (80%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R K A KDPNKPKRP SAFFVF+E+FR+TFKKENP +V+ VGKAAG KWKS+S +EKA
Sbjct: 27 RGKAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKA 86
Query: 104 PYESKAEKLKSEYGKKMNAYNKK 126
PY +KAEK K EY K + AYNKK
Sbjct: 87 PYVAKAEKRKVEYEKNIKAYNKK 109
>gi|224083306|ref|XP_002306980.1| high mobility group family [Populus trichocarpa]
gi|222856429|gb|EEE93976.1| high mobility group family [Populus trichocarpa]
Length = 160
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 68/82 (82%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
KA KDPNKPKRP SAFFVF+EEFR+ +K+E+P +V+AVGKA G KWKS+S AEKAP+
Sbjct: 36 KAAKDPNKPKRPASAFFVFMEEFREQYKREHPKNKSVAAVGKAGGDKWKSLSEAEKAPFV 95
Query: 107 SKAEKLKSEYGKKMNAYNKKQV 128
+KA+K K EY KKM AYNK+Q+
Sbjct: 96 AKADKRKVEYEKKMKAYNKEQL 117
>gi|145323960|ref|NP_001077569.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|332191887|gb|AEE30008.1| high mobility group B2 protein [Arabidopsis thaliana]
Length = 143
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 67/83 (80%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R K A KDPNKPKRP SAFFVF+E+FR+TFKKENP +V+ VGKAAG KWKS+S +EKA
Sbjct: 27 RGKAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKA 86
Query: 104 PYESKAEKLKSEYGKKMNAYNKK 126
PY +KAEK K EY K + AYNKK
Sbjct: 87 PYVAKAEKRKVEYEKNIKAYNKK 109
>gi|118484838|gb|ABK94286.1| unknown [Populus trichocarpa]
Length = 144
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 79/109 (72%), Gaps = 5/109 (4%)
Query: 23 KVGKRKAATAKLDSGSKRQG-----KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKEN 77
K G+ K+ + D+ KR+G K KKA KDPNKPKRP SAFFVF+E+FRK +K+ +
Sbjct: 2 KGGRSKSDSRNNDAKLKRKGAGAGTKASKKAAKDPNKPKRPASAFFVFMEDFRKQYKESH 61
Query: 78 PNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
PN +V+AVGKA G KWKS+S AEKAP+ +KAEK K EY K M AYNK+
Sbjct: 62 PNNKSVAAVGKAGGDKWKSLSEAEKAPFAAKAEKRKFEYNKDMAAYNKR 110
>gi|309243128|gb|ADD74180.2| high mobility group box 3 protein [Gossypium hirsutum]
Length = 139
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 62/76 (81%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SAFFVF+EEFRK +K+ NP+ +VSAVGKA G KWKSM+ AEKAPY KAE
Sbjct: 34 DPNKPKRPASAFFVFMEEFRKQYKEANPDNRSVSAVGKAGGEKWKSMTDAEKAPYVQKAE 93
Query: 111 KLKSEYGKKMNAYNKK 126
K KSEY KKM AYN K
Sbjct: 94 KRKSEYNKKMQAYNLK 109
>gi|351725757|ref|NP_001235312.1| uncharacterized protein LOC100499992 [Glycine max]
gi|255628371|gb|ACU14530.1| unknown [Glycine max]
Length = 139
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 74/97 (76%), Gaps = 5/97 (5%)
Query: 35 DSGSKRQG-----KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
DS KR+G K+ +KA KDPNKPKRPPSAFFVF+ EFR+ FKKE+PN +V+ VGKA
Sbjct: 12 DSRLKRKGAGAGRKQSRKAAKDPNKPKRPPSAFFVFMSEFREQFKKEHPNNKSVAVVGKA 71
Query: 90 AGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
G KWKS+S AEKAP+ + AEK K EY K ++AYNK+
Sbjct: 72 GGEKWKSLSDAEKAPFVATAEKKKQEYEKTISAYNKQ 108
>gi|157382900|gb|ABV48885.1| high mobility group protein B3 [Physcomitrella patens]
Length = 158
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 63/77 (81%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPP+AFF+FL EFR+ FK+ENPNV V+AVGKA G KWKSMS AEK P+ +KA
Sbjct: 49 DPNAPKRPPTAFFIFLNEFREVFKRENPNVKGVTAVGKAGGEKWKSMSEAEKQPFMTKAV 108
Query: 111 KLKSEYGKKMNAYNKKQ 127
+ KSEY K ++AYNKKQ
Sbjct: 109 QKKSEYDKTISAYNKKQ 125
>gi|157382898|gb|ABV48884.1| high mobility group protein B2 [Physcomitrella patens]
Length = 165
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/129 (53%), Positives = 82/129 (63%), Gaps = 7/129 (5%)
Query: 2 KGAKGKGAA---RVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
KG KG GA V ++ K D+ + KRK + K + K KDPN PKRP
Sbjct: 5 KGKKGVGAVAKRDVKEKVTKVQDKDIKKRKGPVKE----PKGGKAKSAKKAKDPNAPKRP 60
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
+AFF+FL EFR+ FKKENPNV V+AVGKA G KWKSMS AEK PY KA + KSEY K
Sbjct: 61 ATAFFIFLNEFREVFKKENPNVKGVAAVGKAGGEKWKSMSEAEKQPYMQKAVQKKSEYDK 120
Query: 119 KMNAYNKKQ 127
++AYNKKQ
Sbjct: 121 TLSAYNKKQ 129
>gi|297836478|ref|XP_002886121.1| hypothetical protein ARALYDRAFT_480649 [Arabidopsis lyrata subsp.
lyrata]
gi|297331961|gb|EFH62380.1| hypothetical protein ARALYDRAFT_480649 [Arabidopsis lyrata subsp.
lyrata]
Length = 143
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
Query: 23 KVGKRKAATAKLDSGSKRQGKRE-KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVT 81
K G+ KA D K +G++ KK KKDPN+PKRPPSAFFVFLE+FRK F NPN
Sbjct: 2 KGGESKAEATSTDQRLKTRGRKPGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNK 61
Query: 82 AVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
+V+ VGKAAG +WKSM+ +KAPY +KAE K+EY K M YN K
Sbjct: 62 SVATVGKAAGARWKSMTEEDKAPYVAKAESRKTEYLKTMQQYNMK 106
>gi|13877775|gb|AAK43965.1|AF370150_1 putative HMG protein [Arabidopsis thaliana]
Length = 138
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 76/126 (60%), Gaps = 20/126 (15%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG + K A + + LK RK GK K KKDPN+PKRPPS
Sbjct: 1 MKGGESKAEATSTDQRLKTRGRKAGK--------------------KTKKDPNQPKRPPS 40
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVFLE+FRK F NPN +V+ VGKAAG +WK+M+ +KAPY +KAE +K+EY K +
Sbjct: 41 AFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAMTDEDKAPYVAKAESIKTEYIKNV 100
Query: 121 NAYNKK 126
YN K
Sbjct: 101 QQYNLK 106
>gi|359476973|ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-like isoform 1 [Vitis
vinifera]
Length = 156
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/126 (57%), Positives = 86/126 (68%), Gaps = 8/126 (6%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG K K AA V + N R K+K A A K+ K+EK A KDPNKPKRP S
Sbjct: 1 MKGGKSK-AAEVKR--ADSNARLSVKKKGAAA----VGKKTAKKEK-AVKDPNKPKRPAS 52
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+EEFRK +K+++P +VS VGKA G KWKS+S AEKAPY +KAEK K+EY K M
Sbjct: 53 AFFVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSM 112
Query: 121 NAYNKK 126
AYNK+
Sbjct: 113 QAYNKR 118
>gi|359476975|ref|XP_003631923.1| PREDICTED: high mobility group B2 protein-like isoform 2 [Vitis
vinifera]
Length = 125
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/126 (57%), Positives = 86/126 (68%), Gaps = 8/126 (6%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG K K AA V + N R K+K A A K+ K+EK A KDPNKPKRP S
Sbjct: 1 MKGGKSK-AAEVKR--ADSNARLSVKKKGAAA----VGKKTAKKEK-AVKDPNKPKRPAS 52
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+EEFRK +K+++P +VS VGKA G KWKS+S AEKAPY +KAEK K+EY K M
Sbjct: 53 AFFVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSM 112
Query: 121 NAYNKK 126
AYNK+
Sbjct: 113 QAYNKR 118
>gi|304651500|gb|ADM47612.1| high mobility group protein [Hevea brasiliensis]
Length = 146
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 66/82 (80%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
KA KDPNKPKRP SAFFVF+EEFR+ +KKE+P +V+AVGKA G KWKS+S AEKAPY
Sbjct: 31 KAAKDPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSEAEKAPYV 90
Query: 107 SKAEKLKSEYGKKMNAYNKKQV 128
+KAEK K EY KK+ AYNK Q
Sbjct: 91 AKAEKRKVEYEKKLKAYNKGQA 112
>gi|295913099|gb|ADG57812.1| transcription factor [Lycoris longituba]
Length = 120
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
KA KDPNKPKR PSAFFVF+E+FRK FK++NP +V+AVGKA G +WKSMS AEKAP+
Sbjct: 2 KAGKDPNKPKRAPSAFFVFMEDFRKEFKEKNPKNKSVAAVGKAGGERWKSMSDAEKAPFV 61
Query: 107 SKAEKLKSEYGKKMNAYNK 125
KAEKLK+EY KKM AYNK
Sbjct: 62 KKAEKLKAEYEKKMVAYNK 80
>gi|2832355|emb|CAA74403.1| HMG protein [Arabidopsis thaliana]
Length = 138
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 75/126 (59%), Gaps = 20/126 (15%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG + K A + + LK RK GK K KKDPN+PKRPPS
Sbjct: 1 MKGGESKAGATSTDQRLKTRGRKAGK--------------------KTKKDPNQPKRPPS 40
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVFLE+FRK F NPN +V+ VGKAAG +WKSM+ +KAPY +KAE K+EY K +
Sbjct: 41 AFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKSMTDEDKAPYVAKAESRKTEYIKNV 100
Query: 121 NAYNKK 126
YN K
Sbjct: 101 QQYNLK 106
>gi|225457566|ref|XP_002272299.1| PREDICTED: high mobility group-like isoform 1 [Vitis vinifera]
gi|359491843|ref|XP_003634333.1| PREDICTED: high mobility group-like isoform 2 [Vitis vinifera]
gi|297745562|emb|CBI40727.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 63/77 (81%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SAFFVF+EEFRK +K+++P+ +VS VGKA G KWKSMS AEKAPY +KAE
Sbjct: 40 DPNKPKRPASAFFVFMEEFRKQYKEKHPSNKSVSVVGKAGGDKWKSMSEAEKAPYVAKAE 99
Query: 111 KLKSEYGKKMNAYNKKQ 127
K K EY K M AYNKKQ
Sbjct: 100 KRKVEYEKNMKAYNKKQ 116
>gi|297736623|emb|CBI25494.3| unnamed protein product [Vitis vinifera]
Length = 128
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/102 (69%), Positives = 81/102 (79%), Gaps = 3/102 (2%)
Query: 1 MKGAKGKGAARVSQ-EALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRP 58
MK KGK AAR + EALKP DR++GKRKAA K D +K+ K+EK AKKDPNKPKRP
Sbjct: 25 MKVTKGKAAARKDKKEALKPVEDRRLGKRKAAL-KADKSTKKLAKKEKLAKKDPNKPKRP 83
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
PSAFFVFLEEFRK +K+E+PNV AVSAVGKA G KWKS+S A
Sbjct: 84 PSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEA 125
>gi|297845042|ref|XP_002890402.1| hypothetical protein ARALYDRAFT_472304 [Arabidopsis lyrata subsp.
lyrata]
gi|297336244|gb|EFH66661.1| hypothetical protein ARALYDRAFT_472304 [Arabidopsis lyrata subsp.
lyrata]
Length = 141
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/106 (62%), Positives = 79/106 (74%), Gaps = 3/106 (2%)
Query: 23 KVGKRKAAT--AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV 80
K GK K T AKL S +K+ K K A KDPNKPKRP SAFFVF+E+FR+T+KKE+P
Sbjct: 4 KGGKSKTETRNAKL-SVTKKPAKGGKGAAKDPNKPKRPSSAFFVFMEDFRETYKKEHPKN 62
Query: 81 TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
+V+AVGKA G KWKS+S +EKAPY +KA+K K EY K M AYNKK
Sbjct: 63 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKK 108
>gi|351723773|ref|NP_001235499.1| uncharacterized protein LOC100305957 [Glycine max]
gi|255627099|gb|ACU13894.1| unknown [Glycine max]
Length = 142
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 72/97 (74%), Gaps = 5/97 (5%)
Query: 35 DSGSKRQG-----KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
DS KR+G K+ KKA KDPNKPK PPSAFFVF+ EFR+ FKKE+PN +V+ VGKA
Sbjct: 12 DSRLKRKGAGAGRKQSKKAAKDPNKPKGPPSAFFVFMSEFREQFKKEHPNNKSVAVVGKA 71
Query: 90 AGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
G KWKS+S AEKAP+ + AEK K EY K + AYNKK
Sbjct: 72 GGDKWKSLSDAEKAPFVATAEKKKQEYEKTILAYNKK 108
>gi|15227862|ref|NP_179347.1| high mobility group B4 protein [Arabidopsis thaliana]
gi|145323080|ref|NP_001031364.2| high mobility group B4 protein [Arabidopsis thaliana]
gi|310947092|sp|Q42344.1|HMGB4_ARATH RecName: Full=High mobility group B protein 4; AltName: Full=High
mobility group protein G; Short=AtHMGgamma; Short=HMG
gamma; AltName: Full=Nucleosome/chromatin assembly
factor group D 04; Short=Nucleosome/chromatin assembly
factor group D 4
gi|13926177|gb|AAK49570.1|AF370562_1 putative HMG protein [Arabidopsis thaliana]
gi|4914377|gb|AAD32913.1| putative HMG protein [Arabidopsis thaliana]
gi|23297615|gb|AAN12992.1| putative HMG protein [Arabidopsis thaliana]
gi|330251557|gb|AEC06651.1| high mobility group B4 protein [Arabidopsis thaliana]
gi|330251558|gb|AEC06652.1| high mobility group B4 protein [Arabidopsis thaliana]
Length = 138
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 75/126 (59%), Gaps = 20/126 (15%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG + K A + + LK RK GK K KKDPN+PKRPPS
Sbjct: 1 MKGGESKAEATSTDQRLKTRGRKAGK--------------------KTKKDPNQPKRPPS 40
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVFLE+FRK F NPN +V+ VGKAAG +WK+M+ +KAPY +KAE K+EY K +
Sbjct: 41 AFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNV 100
Query: 121 NAYNKK 126
YN K
Sbjct: 101 QQYNLK 106
>gi|357123079|ref|XP_003563240.1| PREDICTED: DNA-binding protein MNB1B-like [Brachypodium distachyon]
Length = 160
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 86/129 (66%), Gaps = 13/129 (10%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKGAK KGA +K + + K K A G R+ KA KDPNKPKR PS
Sbjct: 1 MKGAKSKGA-------VKADTKLAVKSKGAEKPAAKG------RKGKAGKDPNKPKRAPS 47
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF++EFRK FK++NP +V+AVGKAAG +WK++S ++KAPY +KA KLK+EY K +
Sbjct: 48 AFFVFMDEFRKEFKEKNPKNKSVAAVGKAAGERWKTLSESDKAPYVAKANKLKAEYNKAI 107
Query: 121 NAYNKKQVT 129
AYNK + T
Sbjct: 108 AAYNKGEST 116
>gi|224065681|ref|XP_002301918.1| high mobility group family [Populus trichocarpa]
gi|222843644|gb|EEE81191.1| high mobility group family [Populus trichocarpa]
Length = 152
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 64/78 (82%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SAFFVF+EEFR+ +KKE+P +V+AVGKA G KWKS+S AEKAPY +KA+
Sbjct: 39 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSAAEKAPYVAKAD 98
Query: 111 KLKSEYGKKMNAYNKKQV 128
K K EY KKM AYNK+Q
Sbjct: 99 KRKVEYEKKMKAYNKEQA 116
>gi|21592453|gb|AAM64404.1| putative HMG protein [Arabidopsis thaliana]
Length = 138
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 74/126 (58%), Gaps = 20/126 (15%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG + K A + + LK RK G K KKDPN+PKRPPS
Sbjct: 1 MKGGESKAEATSTDQRLKTRGRKAGN--------------------KTKKDPNQPKRPPS 40
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVFLE+FRK F NPN +V+ VGKAAG +WKSM+ +KAPY +KAE K+EY K +
Sbjct: 41 AFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKSMTDEDKAPYVAKAESRKTEYIKNV 100
Query: 121 NAYNKK 126
YN K
Sbjct: 101 QQYNLK 106
>gi|145328748|ref|NP_001077909.1| high mobility group B4 protein [Arabidopsis thaliana]
gi|222423535|dbj|BAH19737.1| AT2G17560 [Arabidopsis thaliana]
gi|330251559|gb|AEC06653.1| high mobility group B4 protein [Arabidopsis thaliana]
Length = 134
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 75/126 (59%), Gaps = 20/126 (15%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKG + K A + + LK RK GK K KKDPN+PKRPPS
Sbjct: 1 MKGGESKAEATSTDQRLKTRGRKAGK--------------------KTKKDPNQPKRPPS 40
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVFLE+FRK F NPN +V+ VGKAAG +WK+M+ +KAPY +KAE K+EY K +
Sbjct: 41 AFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNV 100
Query: 121 NAYNKK 126
YN K
Sbjct: 101 QQYNLK 106
>gi|118488125|gb|ABK95882.1| unknown [Populus trichocarpa]
Length = 151
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 64/78 (82%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SAFFVF+EEFR+ +KKE+P +V+AVGKA G KWKS+S AEKAPY +KA+
Sbjct: 39 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSAAEKAPYVAKAD 98
Query: 111 KLKSEYGKKMNAYNKKQV 128
K K EY KKM AYNK+Q
Sbjct: 99 KRKVEYEKKMKAYNKEQA 116
>gi|1813329|dbj|BAA19156.1| HMG-1 [Canavalia gladiata]
Length = 141
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 76/106 (71%), Gaps = 5/106 (4%)
Query: 26 KRKAATAKLDSGSKRQG-----KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV 80
K KA D+ KR+G K+ KKA KDPNKPKRPPSAFFVF+ EFR+ +KKE+P
Sbjct: 3 KVKADAKAADNRLKRKGAGAGRKQSKKAAKDPNKPKRPPSAFFVFMSEFREQYKKEHPTN 62
Query: 81 TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
+V+ VGKA G KWKS+S AEKAP+ ++AEK K EY K + AYN+K
Sbjct: 63 KSVAVVGKAGGDKWKSLSDAEKAPFVARAEKKKEEYDKSILAYNRK 108
>gi|308569660|gb|ADO34795.1| high mobility group box 1 protein [Gossypium hirsutum]
Length = 142
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 63/77 (81%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SAFFVF+EEFR+ +KK++P +V+AVGKA G KWKS+S AEKAPY +KAE
Sbjct: 31 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKWKSLSEAEKAPYVAKAE 90
Query: 111 KLKSEYGKKMNAYNKKQ 127
K K EY K M AYNK+Q
Sbjct: 91 KRKVEYEKNMKAYNKRQ 107
>gi|357484151|ref|XP_003612362.1| HMG1/2-like protein [Medicago truncatula]
gi|355513697|gb|AES95320.1| HMG1/2-like protein [Medicago truncatula]
Length = 140
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 75/107 (70%), Gaps = 10/107 (9%)
Query: 18 KPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKEN 77
KP D ++ ++ A T G ++ K KDPNKPKRPPSAFFVF+ EFR+ FKKEN
Sbjct: 9 KPADNRLKRKGAGT----------GTKQSKKAKDPNKPKRPPSAFFVFMSEFRERFKKEN 58
Query: 78 PNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYN 124
P+ +V+ VGKA G +WK++S A+KAP+ +KA+KLK EY K M AYN
Sbjct: 59 PSNKSVAVVGKAGGKEWKALSDADKAPFIAKADKLKEEYEKTMRAYN 105
>gi|346467547|gb|AEO33618.1| hypothetical protein [Amblyomma maculatum]
Length = 146
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 76/107 (71%), Gaps = 5/107 (4%)
Query: 22 RKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVT 81
+ G KAA KL + ++GK KA KDPNKPKR PSAFFVFL+EFRK FK++NP
Sbjct: 14 KNAGSAKAADTKL---AVKKGKT--KAAKDPNKPKRAPSAFFVFLDEFRKEFKEKNPENK 68
Query: 82 AVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQV 128
+V+AV KA G +WKSMS A+K PY SKA+KLK EY KK+ AY K Q
Sbjct: 69 SVAAVTKAGGARWKSMSDADKEPYVSKADKLKVEYQKKVKAYEKGQA 115
>gi|145323962|ref|NP_001077570.1| high mobility group B3 protein [Arabidopsis thaliana]
gi|332191890|gb|AEE30011.1| high mobility group B3 protein [Arabidopsis thaliana]
Length = 140
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 70/91 (76%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
S +K+ K K A KDPNKPKRP SAFFVF+E+FR T+K+E+P +V+AVGKA G KWK
Sbjct: 16 SVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWK 75
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
S+S +EKAPY +KA+K K EY K M AYNKK
Sbjct: 76 SLSDSEKAPYVAKADKRKVEYEKNMKAYNKK 106
>gi|18394900|ref|NP_564124.1| high mobility group B3 protein [Arabidopsis thaliana]
gi|75220405|sp|P93047.1|HMGB3_ARATH RecName: Full=High mobility group B protein 3; AltName: Full=High
mobility group protein B 2; Short=AtHMGbeta2; Short=HMG
beta 2; AltName: Full=Nucleosome/chromatin assembly
factor group D 03; Short=Nucleosome/chromatin assembly
factor group D 3
gi|15724174|gb|AAL06479.1|AF411789_1 At1g20690/F2D10_15 [Arabidopsis thaliana]
gi|1694976|emb|CAA70691.1| HMG1 [Arabidopsis thaliana]
gi|2832361|emb|CAA74402.1| HMG protein [Arabidopsis thaliana]
gi|20453325|gb|AAM19901.1| At1g20690/F2D10_15 [Arabidopsis thaliana]
gi|21537072|gb|AAM61413.1| unknown [Arabidopsis thaliana]
gi|22530942|gb|AAM96975.1| expressed protein [Arabidopsis thaliana]
gi|23198424|gb|AAN15739.1| expressed protein [Arabidopsis thaliana]
gi|332191888|gb|AEE30009.1| high mobility group B3 protein [Arabidopsis thaliana]
Length = 141
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 70/91 (76%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
S +K+ K K A KDPNKPKRP SAFFVF+E+FR T+K+E+P +V+AVGKA G KWK
Sbjct: 16 SVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWK 75
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
S+S +EKAPY +KA+K K EY K M AYNKK
Sbjct: 76 SLSDSEKAPYVAKADKRKVEYEKNMKAYNKK 106
>gi|218198917|gb|EEC81344.1| hypothetical protein OsI_24530 [Oryza sativa Indica Group]
Length = 163
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 81/120 (67%), Gaps = 13/120 (10%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKGAK KGAA KP+ + K K A G R+ KA KDPNKPKR PS
Sbjct: 1 MKGAKSKGAA-------KPDAKLAVKSKGAEKPAAKG------RKGKAGKDPNKPKRAPS 47
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
AFFVF+EEFRK FK++NP +V+AVGKAAG +WKS++ A+KAPY +KA KLK+EY + +
Sbjct: 48 AFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYVAKANKLKAEYNRPL 107
>gi|357640485|gb|AET87126.1| high mobility group B2 protein [Brassica napus]
Length = 145
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/76 (67%), Positives = 64/76 (84%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SAFFVF+E+FR+T+KK++PN +V+AVGKA G KWKS+S +EKAP+ +KA+
Sbjct: 34 DPNKPKRPASAFFVFMEDFRQTYKKDHPNNKSVAAVGKAGGEKWKSLSDSEKAPFVAKAD 93
Query: 111 KLKSEYGKKMNAYNKK 126
K K EY K M AYNKK
Sbjct: 94 KRKVEYEKTMKAYNKK 109
>gi|308569658|gb|ADO34794.1| high mobility group box 4 protein [Gossypium hirsutum]
Length = 148
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 62/78 (79%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SAFFVF+EEFR+ +KKE+P +V+AVGKA G KWKS+S AEKAPY +KAE
Sbjct: 35 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGEKWKSLSDAEKAPYIAKAE 94
Query: 111 KLKSEYGKKMNAYNKKQV 128
K K EY K M AY K+Q
Sbjct: 95 KRKVEYEKNMKAYTKRQA 112
>gi|18419623|gb|AAL69379.1|AF462216_1 HMG-domain containing protein [Narcissus pseudonarcissus]
Length = 106
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/69 (76%), Positives = 59/69 (85%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
KA+KDPNKPKRPPSAFFVF+EEFRK FK++NPN VS VGKAAG KWKSMS EKAPYE
Sbjct: 38 KAEKDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYE 97
Query: 107 SKAEKLKSE 115
+KA K K+E
Sbjct: 98 AKAAKRKAE 106
>gi|302796105|ref|XP_002979815.1| hypothetical protein SELMODRAFT_18312 [Selaginella moellendorffii]
gi|302807533|ref|XP_002985461.1| hypothetical protein SELMODRAFT_18313 [Selaginella moellendorffii]
gi|300146924|gb|EFJ13591.1| hypothetical protein SELMODRAFT_18313 [Selaginella moellendorffii]
gi|300152575|gb|EFJ19217.1| hypothetical protein SELMODRAFT_18312 [Selaginella moellendorffii]
Length = 84
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 67/84 (79%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K+EKKA KDPN PKRPP+AFFVFLE FR+ +K+++P+V V+AVGKAAG KW MS +EK
Sbjct: 1 KKEKKASKDPNLPKRPPTAFFVFLESFRQQYKEDHPDVKGVAAVGKAAGDKWSKMSESEK 60
Query: 103 APYESKAEKLKSEYGKKMNAYNKK 126
A Y +KA +L+++Y + M AY KK
Sbjct: 61 AVYVNKAAQLRADYAESMAAYKKK 84
>gi|371721822|gb|AEX55234.1| HMG transcription factor [Allium sativum]
Length = 115
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 61/72 (84%)
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKS 114
PKRPPSAFFVF+E+FRK FK++NP+ VSAVGKAAG KWKS++ AEKAPYE+KA K K+
Sbjct: 2 PKRPPSAFFVFMEDFRKIFKEKNPDNKQVSAVGKAAGDKWKSLTAAEKAPYEAKAAKRKA 61
Query: 115 EYGKKMNAYNKK 126
EY K M AYNKK
Sbjct: 62 EYTKTMAAYNKK 73
>gi|255539248|ref|XP_002510689.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223551390|gb|EEF52876.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 145
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 63/78 (80%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SAFFVF+EEFR+ +KKE+P +V+AVGKA G +WKSMS +EKAP+ +KAE
Sbjct: 34 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDRWKSMSESEKAPFVAKAE 93
Query: 111 KLKSEYGKKMNAYNKKQV 128
K K EY KK+ AYNK Q
Sbjct: 94 KRKIEYEKKLKAYNKGQA 111
>gi|194466163|gb|ACF74312.1| high mobility group protein 1 [Arachis hypogaea]
Length = 139
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 75/100 (75%)
Query: 28 KAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVG 87
KAA +L G+++ K KDPNKPKRPPSAFFVF+ EFR+ +KKE+PN +V+ VG
Sbjct: 9 KAADNRLKRKGAGTGRKQAKKAKDPNKPKRPPSAFFVFMSEFREQYKKEHPNNKSVAVVG 68
Query: 88 KAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
KA G +WKSMS A+KAPY++KAEK K EY + M AYNKKQ
Sbjct: 69 KAGGDRWKSMSDADKAPYQAKAEKKKEEYERTMQAYNKKQ 108
>gi|295913113|gb|ADG57819.1| transcription factor [Lycoris longituba]
Length = 108
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 73/96 (76%), Gaps = 2/96 (2%)
Query: 30 ATAKL--DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVG 87
AT KL G+ ++ +++ KA KDPNKPKR SAFFVF+E FRK FK++NP +V+AVG
Sbjct: 13 ATDKLAVKKGAPKKTEKKVKAGKDPNKPKRAASAFFVFMEGFRKEFKEKNPKNKSVAAVG 72
Query: 88 KAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
KA G KWKSMS AEKAP+ KAEKLK+EY KKM AY
Sbjct: 73 KAGGEKWKSMSDAEKAPFVKKAEKLKAEYEKKMVAY 108
>gi|217075707|gb|ACJ86213.1| unknown [Medicago truncatula]
gi|388513073|gb|AFK44598.1| unknown [Medicago truncatula]
Length = 142
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 74/106 (69%), Gaps = 5/106 (4%)
Query: 26 KRKAATAKLDSGSKRQG-----KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV 80
K KA + D+ KR+G K+ KKA KDPNKPKRPPSAFFVF+ +FR+ +KK++PN
Sbjct: 3 KVKADSKPADNRLKRKGAGAGRKQTKKAAKDPNKPKRPPSAFFVFMSDFREQYKKDHPNN 62
Query: 81 TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
+V+AVGKA G WKSMS +KAPY ++A K K EY AYNKK
Sbjct: 63 KSVAAVGKACGEAWKSMSEEDKAPYAARALKKKEEYEVATQAYNKK 108
>gi|302754440|ref|XP_002960644.1| hypothetical protein SELMODRAFT_75453 [Selaginella moellendorffii]
gi|300171583|gb|EFJ38183.1| hypothetical protein SELMODRAFT_75453 [Selaginella moellendorffii]
Length = 134
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 62/77 (80%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PK+P +AFF+FLEEFR+T+KK++P+V V+A+GKA G WKS+S EK PY +KA
Sbjct: 32 DPNQPKKPATAFFIFLEEFRQTYKKDHPDVKGVAAIGKAGGDMWKSLSDKEKEPYHAKAA 91
Query: 111 KLKSEYGKKMNAYNKKQ 127
K K++Y K + AYNKK+
Sbjct: 92 KRKADYDKDLEAYNKKK 108
>gi|346467231|gb|AEO33460.1| hypothetical protein [Amblyomma maculatum]
Length = 115
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 66/86 (76%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K +KDPNKPKRPP+ FFVF+E FRK +K+ +P +V+ VGKA G KWKS+S +EKA
Sbjct: 2 EGKGEKDPNKPKRPPTGFFVFMEGFRKQYKEAHPKNKSVAVVGKAGGEKWKSLSESEKAV 61
Query: 105 YESKAEKLKSEYGKKMNAYNKKQVTN 130
+ SKAEKL+SEY KK++AY K Q +
Sbjct: 62 FLSKAEKLRSEYQKKIDAYEKGQHVD 87
>gi|950053|emb|CAA90679.1| HMG1/2-like protein [Hordeum vulgare subsp. vulgare]
Length = 160
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 64/83 (77%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKR PSAFFVF+ EFR+ FK++NP +V+AVGKAAG +WKS+S +EKAP+ +KA
Sbjct: 38 DPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPFVAKAN 97
Query: 111 KLKSEYGKKMNAYNKKQVTNLVP 133
KLK EY K + +YNK + T P
Sbjct: 98 KLKGEYNKAIASYNKGESTTAAP 120
>gi|302803281|ref|XP_002983394.1| hypothetical protein SELMODRAFT_117986 [Selaginella moellendorffii]
gi|300149079|gb|EFJ15736.1| hypothetical protein SELMODRAFT_117986 [Selaginella moellendorffii]
Length = 123
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 62/77 (80%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PK+P +AFF+FLEEFR+T+KK++P+V V+A+GKA G WKS+S EK PY +KA
Sbjct: 18 DPNQPKKPATAFFIFLEEFRQTYKKDHPDVKGVAAIGKAGGDMWKSLSDKEKEPYHAKAA 77
Query: 111 KLKSEYGKKMNAYNKKQ 127
K K++Y K + AYNKK+
Sbjct: 78 KRKADYDKDLEAYNKKK 94
>gi|729738|sp|P40621.1|HMGL_WHEAT RecName: Full=HMG1/2-like protein
gi|21803|emb|CAA77641.1| high mobility group protein [Triticum aestivum]
gi|114145392|dbj|BAF30985.1| high mobility globular protein [Triticum aestivum]
Length = 161
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 83/130 (63%), Gaps = 23/130 (17%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGK-----REKKAKKDPNKP 55
MKGAK KGAA+ A AKL SK K ++ KA KDPNKP
Sbjct: 1 MKGAKSKGAAK------------------ADAKLAVKSKGAEKPAAKGKKGKAGKDPNKP 42
Query: 56 KRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSE 115
KR PSAFFVF+ EFR+ FK++NP +V+AVGKAAG +WKS+S +EKAPY +KA KLK E
Sbjct: 43 KRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGE 102
Query: 116 YGKKMNAYNK 125
Y K + AYNK
Sbjct: 103 YNKAIAAYNK 112
>gi|729737|sp|P40620.1|HMGL_VICFA RecName: Full=HMG1/2-like protein
Length = 149
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 60/77 (77%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPNKPKRPPSAFFVF+ +FR+ +KK++PN +V+AVGKA G +WKS+S EKAPY +A
Sbjct: 40 KDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRA 99
Query: 110 EKLKSEYGKKMNAYNKK 126
K K EY + AYNKK
Sbjct: 100 LKKKEEYEITLQAYNKK 116
>gi|357508231|ref|XP_003624404.1| High mobility group protein [Medicago truncatula]
gi|355499419|gb|AES80622.1| High mobility group protein [Medicago truncatula]
Length = 144
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 67/92 (72%), Gaps = 6/92 (6%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KKAK DP+KPKRP S FF+F+ +FR F+KENP+ VS VGKAAG KW+SMS +KAPY
Sbjct: 4 KKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSD-DKAPY 62
Query: 106 ESKAEKLKSEYGKKMNAYNKKQV-----TNLV 132
+ AEK K EY K ++AYNKK + TNLV
Sbjct: 63 VADAEKKKMEYVKAIHAYNKKVLMACNNTNLV 94
>gi|302790391|ref|XP_002976963.1| hypothetical protein SELMODRAFT_175895 [Selaginella moellendorffii]
gi|300155441|gb|EFJ22073.1| hypothetical protein SELMODRAFT_175895 [Selaginella moellendorffii]
Length = 156
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 57/77 (74%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PKRP +AFFVFLEE+RKTFK ++PN+ V+AVGKA G WK ++ EK PY KA
Sbjct: 51 DPNQPKRPATAFFVFLEEYRKTFKDKHPNIKGVAAVGKAGGDAWKRLTEEEKKPYHDKAA 110
Query: 111 KLKSEYGKKMNAYNKKQ 127
+ K++Y K + Y KKQ
Sbjct: 111 QKKADYEKTLTEYKKKQ 127
>gi|302797885|ref|XP_002980703.1| hypothetical protein SELMODRAFT_38818 [Selaginella moellendorffii]
gi|300151709|gb|EFJ18354.1| hypothetical protein SELMODRAFT_38818 [Selaginella moellendorffii]
Length = 83
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 57/77 (74%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PKRP +AFFVFLEE+RKTFK ++PN+ V+AVGKA G WK ++ EK PY KA
Sbjct: 7 DPNQPKRPATAFFVFLEEYRKTFKDKHPNIKGVAAVGKAGGDAWKRLTEEEKKPYHDKAA 66
Query: 111 KLKSEYGKKMNAYNKKQ 127
+ K++Y K + Y KKQ
Sbjct: 67 QKKADYEKTLTEYKKKQ 83
>gi|359484115|ref|XP_002267697.2| PREDICTED: high mobility group B protein 7-like [Vitis vinifera]
gi|147815109|emb|CAN61363.1| hypothetical protein VITISV_034306 [Vitis vinifera]
gi|297742725|emb|CBI35359.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 54/75 (72%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PKRPP+AFF+F+++FRK +K+ NP+ VS V K G KWKSM+ EK PY KA
Sbjct: 94 KDPNMPKRPPTAFFLFMDDFRKEYKESNPDSKNVSVVAKEGGEKWKSMTDEEKKPYVDKA 153
Query: 110 EKLKSEYGKKMNAYN 124
+LK+EY K M YN
Sbjct: 154 AELKAEYDKAMETYN 168
>gi|351722065|ref|NP_001236719.1| uncharacterized protein LOC100306558 [Glycine max]
gi|255628875|gb|ACU14782.1| unknown [Glycine max]
Length = 209
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 54/77 (70%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPP+AFFVFL++FRK+FK+ NP+ V VGK AG KW+SM+ EK PY K
Sbjct: 99 DPNMPKRPPTAFFVFLDDFRKSFKEANPDSKDVKRVGKEAGEKWRSMTDEEKKPYLDKVA 158
Query: 111 KLKSEYGKKMNAYNKKQ 127
+LK EY K M +Y Q
Sbjct: 159 ELKEEYEKAMESYEAGQ 175
>gi|116785888|gb|ABK23898.1| unknown [Picea sitchensis]
Length = 220
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
REKKA+ DPN+PK+P +AFFVF+++FRKT+K+ NP+V + VGK G KWK+MS +K
Sbjct: 98 REKKAR-DPNQPKKPATAFFVFMDDFRKTYKETNPDVKGAAQVGKEGGLKWKAMSDEDKK 156
Query: 104 PYESKAEKLKSEYGKKMNAYNK 125
PY KA +LK+EY K M+ Y +
Sbjct: 157 PYLEKAAELKAEYEKAMSKYQQ 178
>gi|4468042|emb|CAB37859.1| unnamed protein product [Vicia faba var. minor]
Length = 74
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPNKPKRPPSAFFVF+ +FR+ +KK++PN +V+AVGKA G +WKS+S EKAPY +A
Sbjct: 1 KDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRA 60
Query: 110 EKLKSEYGKKMNAY 123
K K EY + AY
Sbjct: 61 LKKKEEYEITLQAY 74
>gi|356536465|ref|XP_003536758.1| PREDICTED: high mobility group B protein 7-like [Glycine max]
Length = 200
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 54/77 (70%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPP+AFF FL++FRK+FK+ NP+ V VGK AG KW+SM+ EK PY K
Sbjct: 99 DPNMPKRPPTAFFAFLDDFRKSFKEANPDSKDVKRVGKEAGEKWRSMTDEEKKPYLDKVA 158
Query: 111 KLKSEYGKKMNAYNKKQ 127
+LK+EY K M +Y Q
Sbjct: 159 ELKAEYEKAMESYEAGQ 175
>gi|388495062|gb|AFK35597.1| unknown [Lotus japonicus]
Length = 162
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 64/99 (64%), Gaps = 3/99 (3%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K + D NKPK+PP+AFF FLE+FRK F+ +NP+V + +GK+ G KWK+M+ EK Y
Sbjct: 62 KQRIDANKPKKPPTAFFYFLEDFRKEFQVQNPDVKTMRDIGKSCGEKWKTMTYEEKVQYY 121
Query: 107 SKAEKLKSEYGKKMNAYNKKQVTNLVPFFNSVDAFGSLL 145
A + ++E+ + M YNKK V+NL N+V + L
Sbjct: 122 DIATEKRAEFDRAMTEYNKKMVSNLS---NNVHGYCVYL 157
>gi|449468356|ref|XP_004151887.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|449517965|ref|XP_004166014.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
Length = 142
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 66/106 (62%), Gaps = 11/106 (10%)
Query: 18 KPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKEN 77
KPN +K+ +RKA + K K KKD N PKRP + FFVF+EEFRKT+K++
Sbjct: 13 KPNPQKLKQRKA-----------EMKSTKSKKKDQNAPKRPATTFFVFMEEFRKTYKEQF 61
Query: 78 PNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
P+ A VGK G KWKSMS AEKAPY KA K K+EY + AY
Sbjct: 62 PDAKAGPVVGKVGGEKWKSMSDAEKAPYAEKALKRKAEYEIALEAY 107
>gi|449464956|ref|XP_004150195.1| PREDICTED: high mobility group B protein 7-like [Cucumis sativus]
gi|449531370|ref|XP_004172659.1| PREDICTED: high mobility group B protein 7-like [Cucumis sativus]
Length = 207
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 40 RQGKREKKAKKD--PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
++ + EKK KKD PN PKRPP+AFF+F+++FRK++K+ NP+ V V K G KWKSM
Sbjct: 94 KKSRTEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSM 153
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYN 124
+ EK PY+ KA +LK+EY K + + N
Sbjct: 154 TDEEKKPYQDKAAELKAEYEKALESRN 180
>gi|15237040|ref|NP_195282.1| high mobility group B5 protein [Arabidopsis thaliana]
gi|75219649|sp|O49597.1|HMGB5_ARATH RecName: Full=High mobility group B protein 5; AltName: Full=High
mobility group protein D; Short=AtHMGdelta; Short=HMG
delta; AltName: Full=Nucleosome/chromatin assembly
factor group D 05; Short=Nucleosome/chromatin assembly
factor group D 5
gi|2832363|emb|CAA74404.1| HMG protein [Arabidopsis thaliana]
gi|3367575|emb|CAA20027.1| HMG delta protein [Arabidopsis thaliana]
gi|7270508|emb|CAB80273.1| HMG delta protein [Arabidopsis thaliana]
gi|21553743|gb|AAM62836.1| HMG delta protein [Arabidopsis thaliana]
gi|98961063|gb|ABF59015.1| At4g35570 [Arabidopsis thaliana]
gi|222423786|dbj|BAH19859.1| AT4G35570 [Arabidopsis thaliana]
gi|332661132|gb|AEE86532.1| high mobility group B5 protein [Arabidopsis thaliana]
Length = 125
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 61/90 (67%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D K +G + K KDPN+PK+PPS FFVFL++FRK F NP+ +V VG+AAG KW
Sbjct: 14 DDRLKVRGNKVGKKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAAGKKW 73
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYN 124
K+M+ E+AP+ +K++ K+EY M YN
Sbjct: 74 KTMTEEERAPFVAKSQSKKTEYAVTMQQYN 103
>gi|388499756|gb|AFK37944.1| unknown [Lotus japonicus]
Length = 197
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 46 KKAKK--DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+KAKK DPN+PKRPP+AFFVFL++FRK FK+ NP V VGK G KW++M+ EK
Sbjct: 91 EKAKKVEDPNQPKRPPTAFFVFLDDFRKEFKEANPGSKDVKRVGKEGGEKWRAMTDEEKK 150
Query: 104 PYESKAEKLKSEYGKKMNAYN 124
PY K +LK EY K M YN
Sbjct: 151 PYLEKVAELKEEYEKAMANYN 171
>gi|255566393|ref|XP_002524182.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223536551|gb|EEF38197.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 155
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 63/86 (73%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
+++K KD + PKRP SAFF+F++EFRK FK++ P+ AVSAVGKA G KWKS+S +
Sbjct: 35 SRKKKNVSKDTDAPKRPASAFFIFMDEFRKYFKEKYPDNKAVSAVGKAGGEKWKSLSETD 94
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQ 127
KAPY KA K K+EY K + AY +++
Sbjct: 95 KAPYLEKALKRKAEYEKVLEAYKQQK 120
>gi|168050181|ref|XP_001777538.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671023|gb|EDQ57581.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 314
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYES 107
A KD + PKRPPSA+F+F+E FRK FK NP+V V+A KA G KW SMS EKAPY +
Sbjct: 186 AAKDSDMPKRPPSAYFIFMETFRKEFKAANPDVKGVTASAKAGGEKWLSMSEEEKAPYVA 245
Query: 108 KAEKLKSEYGKKMNAY 123
+A K +Y + M AY
Sbjct: 246 EASVRKGQYEQAMTAY 261
>gi|157382896|gb|ABV48883.1| high mobility group protein B1 [Physcomitrella patens]
Length = 215
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYES 107
A KD + PKRPPSA+F+F+E FRK FK NP+V V+A KA G KW SMS EKAPY +
Sbjct: 130 AAKDSDMPKRPPSAYFIFMETFRKEFKAANPDVKGVTASAKAGGEKWLSMSEEEKAPYVA 189
Query: 108 KAEKLKSEYGKKMNAY 123
+A K +Y + M AY
Sbjct: 190 EASVRKGQYEQAMTAY 205
>gi|125583208|gb|EAZ24139.1| hypothetical protein OsJ_07880 [Oryza sativa Japonica Group]
Length = 170
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR+K A KPKRPPSAFFVF+ EFR+ ++ +P+ +V+AV KAAG KW++MS E
Sbjct: 47 GKRKKAAA--SGKPKRPPSAFFVFMSEFRQEYQAAHPDNKSVAAVSKAAGEKWRAMSEQE 104
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQVTN 130
KAPY KA + K +Y K ++KK+ T+
Sbjct: 105 KAPYVDKAGQKKQDYEKTKANFDKKESTS 133
>gi|225463454|ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 [Vitis vinifera]
gi|297740668|emb|CBI30850.3| unnamed protein product [Vitis vinifera]
Length = 175
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Query: 36 SGSKRQGKREKKAKK-DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
SG+K + K +K++++ D KPK+PP+AFF FLE+FRK F+++NP+V ++ +GKA G KW
Sbjct: 68 SGNKAKAKTKKRSQRVDSKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKW 127
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
K+M+ EK Y A + ++E+ + M Y K+Q
Sbjct: 128 KTMTYEEKVQYYDIATEKRAEFDRAMADYIKRQ 160
>gi|115447831|ref|NP_001047695.1| Os02g0670400 [Oryza sativa Japonica Group]
gi|50251344|dbj|BAD28320.1| putative high mobility group protein [Oryza sativa Japonica Group]
gi|50252158|dbj|BAD28154.1| putative high mobility group protein [Oryza sativa Japonica Group]
gi|113537226|dbj|BAF09609.1| Os02g0670400 [Oryza sativa Japonica Group]
Length = 145
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR+K A KPKRPPSAFFVF+ EFR+ ++ +P+ +V+AV KAAG KW++MS E
Sbjct: 22 GKRKKAAA--SGKPKRPPSAFFVFMSEFRQEYQAAHPDNKSVAAVSKAAGEKWRAMSEQE 79
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQVTN 130
KAPY KA + K +Y K ++KK+ T+
Sbjct: 80 KAPYVDKAGQKKQDYEKTKANFDKKESTS 108
>gi|413935044|gb|AFW69595.1| high mobility group protein1 [Zea mays]
Length = 97
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 63/98 (64%), Gaps = 14/98 (14%)
Query: 1 MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
MKGAK KGAA+ D K+ + K G R+ KA KDPNKPKR PS
Sbjct: 1 MKGAKSKGAAKA--------DAKLAVKSKGAEKPAKG------RKGKAGKDPNKPKRAPS 46
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
AFFVF+EEFRK FK++NP +V+AVGKAAG +WKS+S
Sbjct: 47 AFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLS 84
>gi|388501678|gb|AFK38905.1| unknown [Medicago truncatula]
Length = 152
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 54/80 (67%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K K D KPK+PP+AFF FLE+FRK FK +NP+V ++ +GKA G KWK+M+ EK Y
Sbjct: 56 KQKIDAKKPKKPPTAFFYFLEDFRKEFKDQNPDVKSMRDIGKACGEKWKTMTFEEKVQYY 115
Query: 107 SKAEKLKSEYGKKMNAYNKK 126
A + ++E+ + YNKK
Sbjct: 116 DIATEKRAEFDRATTEYNKK 135
>gi|18700443|dbj|BAB85204.1| high mobility group box protein 2 [Oryza sativa Japonica Group]
gi|125540625|gb|EAY87020.1| hypothetical protein OsI_08417 [Oryza sativa Indica Group]
Length = 145
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR+K A KPKRPPSAFFVF+ EFR+ ++ +P +V+AV KAAG KW++MS E
Sbjct: 22 GKRKKAAA--SGKPKRPPSAFFVFMSEFRQEYQAAHPGNKSVAAVSKAAGEKWRAMSEQE 79
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQVTN 130
KAPY KA + K +Y K ++KK+ T+
Sbjct: 80 KAPYVDKAGQKKQDYEKTKANFDKKESTS 108
>gi|255557355|ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223541125|gb|EEF42681.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 198
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYES 107
AK D KPK+PP+AFF FLE+FRK F+K+NP+V ++ +GKA G KWK M+ EK Y
Sbjct: 103 AKLDSKKPKKPPTAFFYFLEDFRKDFQKQNPDVKSMREIGKACGEKWKMMTYEEKVKYYD 162
Query: 108 KAEKLKSEYGKKMNAYNKK 126
A + ++E+ K M Y KK
Sbjct: 163 IATEKRAEFDKAMAEYIKK 181
>gi|449433698|ref|XP_004134634.1| PREDICTED: high mobility group B protein 14-like [Cucumis sativus]
gi|449505924|ref|XP_004162605.1| PREDICTED: high mobility group B protein 14-like [Cucumis sativus]
Length = 161
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 55/81 (67%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
D NKPK+PP+AFF FL++FRK F+++NP+V + VGKA G KWK+M+ EK Y A
Sbjct: 69 DVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTMTYEEKVQYYDIAT 128
Query: 111 KLKSEYGKKMNAYNKKQVTNL 131
+ ++E+ K M Y K+ + +
Sbjct: 129 EKRAEFDKAMTEYKKRMESGI 149
>gi|357136925|ref|XP_003570053.1| PREDICTED: HMG1/2-like protein-like [Brachypodium distachyon]
Length = 144
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 54/74 (72%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFFVF+ EFR+ ++ E+PN +V+ V KAAG KW+SMS A+KAPY KA + K +Y
Sbjct: 36 RPPSAFFVFMSEFRQEYQAEHPNNKSVANVSKAAGEKWRSMSDADKAPYVEKAGQKKQDY 95
Query: 117 GKKMNAYNKKQVTN 130
K ++KK+ T+
Sbjct: 96 EKTKATFDKKESTS 109
>gi|356524949|ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-like [Glycine max]
Length = 148
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 52/76 (68%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
D KPK+PP+AFF FLE+FRK F+++NP+V ++ +GKA G KWK+M+ EK Y A
Sbjct: 56 DAMKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIAT 115
Query: 111 KLKSEYGKKMNAYNKK 126
K + E+ M +NKK
Sbjct: 116 KKREEFDNAMAEFNKK 131
>gi|226503761|ref|NP_001151622.1| HMG1/2-like protein [Zea mays]
gi|195648164|gb|ACG43550.1| HMG1/2-like protein [Zea mays]
gi|414881086|tpg|DAA58217.1| TPA: HMG1/2-like protein [Zea mays]
Length = 115
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 63/99 (63%)
Query: 29 AATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGK 88
A A S +KR+ + + K DP PK+PP+AFF F+E+FRK +K+E P+V ++ +GK
Sbjct: 15 VAMAPRPSSTKRKPRPKPAGKGDPRAPKKPPTAFFYFMEDFRKIYKQEKPSVKSMQEIGK 74
Query: 89 AAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
A G KW +M+ EK Y A + ++E+ K M YNKK+
Sbjct: 75 ACGEKWNTMTFEEKVKYYDIATEKRAEFEKAMIEYNKKK 113
>gi|351724833|ref|NP_001237839.1| uncharacterized protein LOC100305607 [Glycine max]
gi|255626057|gb|ACU13373.1| unknown [Glycine max]
Length = 150
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 52/76 (68%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
D KP++PP+AFF FLE+FRK F+++NP+V ++ +GKA G KWK+M+ EK Y A
Sbjct: 58 DAMKPRKPPTAFFYFLEDFRKEFQEQNPDVRSMRDIGKACGEKWKTMTYEEKVQYYDIAT 117
Query: 111 KLKSEYGKKMNAYNKK 126
K + E+ M +NKK
Sbjct: 118 KKREEFDSAMAEFNKK 133
>gi|357135842|ref|XP_003569517.1| PREDICTED: high mobility group B protein 14-like [Brachypodium
distachyon]
Length = 127
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 54/79 (68%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP +PK+PP+AFF F+E+FR FK ENP+V ++ +G+A G KW M+ EK Y A
Sbjct: 39 DPRRPKKPPTAFFYFMEDFRDKFKAENPSVKSMQDIGRACGEKWNKMAFEEKVKYYDLAT 98
Query: 111 KLKSEYGKKMNAYNKKQVT 129
+ ++E+ K M YNKK+++
Sbjct: 99 ERRAEFEKAMAQYNKKKIS 117
>gi|357484153|ref|XP_003612363.1| HMG1/2-like protein [Medicago truncatula]
gi|355513698|gb|AES95321.1| HMG1/2-like protein [Medicago truncatula]
Length = 94
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 10/83 (12%)
Query: 18 KPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKEN 77
KP D ++ ++ A T G ++ K KDPNKPKRPPSAFFVF+ EFR+ FKKEN
Sbjct: 9 KPADNRLKRKGAGT----------GTKQSKKAKDPNKPKRPPSAFFVFMSEFRERFKKEN 58
Query: 78 PNVTAVSAVGKAAGGKWKSMSPA 100
P+ +V+ VGKA G +WK++S A
Sbjct: 59 PSNKSVAVVGKAGGKEWKALSDA 81
>gi|224097317|ref|XP_002310906.1| high mobility group family [Populus trichocarpa]
gi|118483462|gb|ABK93630.1| unknown [Populus trichocarpa]
gi|222853809|gb|EEE91356.1| high mobility group family [Populus trichocarpa]
Length = 201
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 51/75 (68%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
+DPN PKRPP+AFF+F+++FRK +K+ NP+ V V K G +WKSM+ EK Y KA
Sbjct: 100 RDPNAPKRPPTAFFLFMDDFRKEYKEANPDSKDVKKVAKEGGVRWKSMTDEEKKQYVDKA 159
Query: 110 EKLKSEYGKKMNAYN 124
+LK+E K + + N
Sbjct: 160 AELKAENDKALESDN 174
>gi|51858856|gb|AAH81424.1| Hmgb3b protein [Danio rerio]
Length = 166
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GK+ +K KKDPN P+RPPS FF+F E R K +NP++ + V K GG W ++S +E
Sbjct: 81 GKKGRKQKKDPNAPRRPPSGFFLFCAEQRPIIKAQNPSL-GIGDVAKKLGGMWNNLSDSE 139
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQ 127
K P+ S A+KLK +Y K M Y KK+
Sbjct: 140 KQPFLSNADKLKDKYQKDMAFYKKKK 165
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK DP KPK SA+ F++ R+ K+NP VT S K +WK+MSP EK +E
Sbjct: 2 AKGDPGKPKGKMSAYAYFVKTCREEHNKKNPGVTVNFSEFSKKCSERWKTMSPKEKTKFE 61
Query: 107 SKAEKLKSEYGKKMNAYN 124
A++ K+ Y ++M YN
Sbjct: 62 DLAKQDKARYDQEMMHYN 79
>gi|348543650|ref|XP_003459296.1| PREDICTED: high mobility group protein B2-like isoform 1
[Oreochromis niloticus]
Length = 200
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 10/116 (8%)
Query: 16 ALKPNDRKVGKRKAATAKLDSGSKRQ--------GKREKKAKKDPNKPKRPPSAFFVFLE 67
AL P+D+K + A K+ + + GKR +K +KDPN PKRPPSAFFVF
Sbjct: 51 ALSPSDKKCFEDMAKADKVRYNREMKDYVPPKGFGKRGRK-RKDPNAPKRPPSAFFVFCS 109
Query: 68 EFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
E+R + K++ P ++ + K G W +S +EK PYE KA+KL+ +Y + M AY
Sbjct: 110 EYRPSVKQQYPGLS-IGDCAKKLGEMWSKLSQSEKQPYEEKAQKLREKYDRDMVAY 164
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
+KD NKPK SA+ F++ R+ +K+NP + + K +WK++SP++K +E
Sbjct: 3 RKDINKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSPSDKKCFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 MAKADKVRYNREMKDY 78
>gi|213982973|ref|NP_001135648.1| uncharacterized protein LOC100216207 [Xenopus (Silurana)
tropicalis]
gi|156914901|gb|AAI52619.1| Hmgb2 protein [Danio rerio]
gi|197245630|gb|AAI68534.1| Unknown (protein for MGC:181066) [Xenopus (Silurana) tropicalis]
Length = 214
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKRPPSAFFVF E+R T K E+PN+T + + K G W S ++AP+E K
Sbjct: 91 KKDPNAPKRPPSAFFVFCSEYRPTVKSEHPNLT-IGEIAKKLGELWSKQSSKDRAPFEQK 149
Query: 109 AEKLKSEYGKKMNAY 123
A KL+ +Y K++ AY
Sbjct: 150 AGKLREKYEKEVAAY 164
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K D NKPK SA+ F++ R K++ P+V S K +WKS++ ++K +E
Sbjct: 2 VKGDVNKPKGKTSAYAFFVQTCRDEHKRKGPDVPVNFSEFSKKCSERWKSLNASDKVKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 DMAKADKVRYDREMKTY 78
>gi|52219178|ref|NP_001004674.1| high-mobility group box 2b [Danio rerio]
gi|51858850|gb|AAH81415.1| High-mobility group box 2 [Danio rerio]
gi|182889482|gb|AAI65150.1| Hmgb2 protein [Danio rerio]
Length = 214
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKRPPSAFFVF E+R T K E+PN+T + + K G W S ++AP+E K
Sbjct: 91 KKDPNAPKRPPSAFFVFCSEYRPTVKSEHPNLT-IGEIAKKLGELWSKQSSKDRAPFEQK 149
Query: 109 AEKLKSEYGKKMNAY 123
A KL+ +Y K++ AY
Sbjct: 150 AGKLREKYEKEVAAY 164
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K D NKPK SA+ F++ R K+++P+V S K +WKS++ ++K +E
Sbjct: 2 VKGDVNKPKGKTSAYAFFVQTCRDEHKRKSPDVPVNFSEFSKKCSERWKSLNASDKVKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 DMAKADKVRYDREMKTY 78
>gi|432953329|ref|XP_004085352.1| PREDICTED: high mobility group protein B2-like isoform 1 [Oryzias
latipes]
Length = 200
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR +K +KDPN PKRPPSAFFVF E+R + K++ P ++ + K G W +S +E
Sbjct: 85 GKRGRK-RKDPNAPKRPPSAFFVFCSEYRPSVKQQYPGLS-IGDCAKKLGEMWSKLSQSE 142
Query: 102 KAPYESKAEKLKSEYGKKMNAY 123
K PYE KA+KL+ +Y + M AY
Sbjct: 143 KQPYEEKAQKLREKYDRDMVAY 164
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
+KD NKPK SA+ F++ R+ +K+NP + + K +WK++SP++K +E
Sbjct: 3 RKDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSPSDKKCFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 MAKADKVRYNREMCDY 78
>gi|47190944|emb|CAF93003.1| unnamed protein product [Tetraodon nigroviridis]
Length = 204
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR +K +KDPN PKRPPSAFFVF E+R + K++ P ++ + K G W +S +E
Sbjct: 88 GKRGRK-RKDPNAPKRPPSAFFVFCSEYRPSVKQQFPGLS-IGDCAKKLGEMWSKLSQSE 145
Query: 102 KAPYESKAEKLKSEYGKKMNAY 123
K PYE KA+KL+ +Y + M AY
Sbjct: 146 KQPYEEKAQKLREKYDRDMVAY 167
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
+KD NKPK SA+ F++ R+ +K+NP + + K +WK++S +K +E
Sbjct: 6 RKDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSAGDKKCFED 65
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 66 MAKADKVRYNREMRDY 81
>gi|388511193|gb|AFK43658.1| unknown [Lotus japonicus]
Length = 92
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 46/59 (77%)
Query: 66 LEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYN 124
+ EFR FKK+NPN +V+AVGKAAG KWKSM+ AEKAPY ++AEK K EY K + AYN
Sbjct: 1 MSEFRTQFKKDNPNNKSVAAVGKAAGSKWKSMTDAEKAPYVARAEKAKEEYEKTLRAYN 59
>gi|410917315|ref|XP_003972132.1| PREDICTED: high mobility group protein B2-like [Takifugu rubripes]
Length = 214
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KKDPN PKRPPSAFFVF + R K++NP ++ + + K G W + P +KAPY
Sbjct: 86 RKKKKDPNAPKRPPSAFFVFCSDHRPKIKEDNPGIS-IGDIAKKLGELWSTQGPKDKAPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E++A KLK +Y K + AY K
Sbjct: 145 EARAAKLKEKYEKDVAAYKAK 165
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KD +PK S++ F+ R KK++P S K +WK+MS EK+ +E
Sbjct: 2 KDHGRPKGKMSSYAFFVTTCRDEHKKKHPGTPVNFSEFSKKCSERWKNMSSKEKSKFEEL 61
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 62 AKTDKIRYDQEMQSY 76
>gi|410930542|ref|XP_003978657.1| PREDICTED: high mobility group protein B2-like [Takifugu rubripes]
Length = 201
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR +K +KDPN PKRPPSAFFVF E+R + K++ P ++ + K G W ++ +E
Sbjct: 85 GKRGRK-RKDPNAPKRPPSAFFVFCSEYRPSVKQQYPGLS-IGDCAKKLGEMWSKLTQSE 142
Query: 102 KAPYESKAEKLKSEYGKKMNAY 123
K PYE KA+KL+ +Y + M AY
Sbjct: 143 KQPYEEKAQKLREKYDRDMVAY 164
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
+KD NKPK SA+ F++ R+ +K+NP + + K +WK +S ++K +E
Sbjct: 3 RKDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKGLSASDKKCFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 MAKADKVRYNREMRDY 78
>gi|297597325|ref|NP_001043799.2| Os01g0666200 [Oryza sativa Japonica Group]
gi|56202161|dbj|BAD73639.1| HMG protein-like [Oryza sativa Japonica Group]
gi|125527174|gb|EAY75288.1| hypothetical protein OsI_03176 [Oryza sativa Indica Group]
gi|215693961|dbj|BAG89148.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673529|dbj|BAF05713.2| Os01g0666200 [Oryza sativa Japonica Group]
Length = 133
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 55/77 (71%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
D +PK+PP+AFF F+E+FRKT+K+ENP+V ++ VGKA G KW +M+ E+ Y A
Sbjct: 45 DRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFEERVKYYDIAT 104
Query: 111 KLKSEYGKKMNAYNKKQ 127
+ ++EY K + ++KK+
Sbjct: 105 EKRAEYEKAVAEFDKKK 121
>gi|71027705|ref|XP_763496.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350449|gb|EAN31213.1| high mobility group protein, putative [Theileria parva]
Length = 94
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVT-AVSAVGKAAGGKWKS 96
SK GK+ K+AKKDPN PKR S++ F +E R +ENP++ V+AVGK G W S
Sbjct: 6 SKSAGKKSKRAKKDPNAPKRALSSYMFFAKEKRAELVRENPDLARDVAAVGKLVGAAWNS 65
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+ +EKAPYE AE ++ Y K+ AYNK
Sbjct: 66 LDESEKAPYEKLAEADRARYEKEKAAYNK 94
>gi|162460809|ref|NP_001105483.1| high mobility group protein3 [Zea mays]
gi|1845197|emb|CAA69606.1| HMGc2 [Zea mays]
gi|223947405|gb|ACN27786.1| unknown [Zea mays]
gi|413923414|gb|AFW63346.1| HMGc2 protein [Zea mays]
Length = 138
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
KPKRPPSAFFVF+ EFR+ ++ ++P +V+AV KAAG KW+SMS EK PY +A + K
Sbjct: 33 KPKRPPSAFFVFMSEFRQEYQAQHPGNKSVAAVSKAAGEKWRSMSEQEKQPYVDQAGQKK 92
Query: 114 SEYGK 118
+Y K
Sbjct: 93 QDYEK 97
>gi|194700664|gb|ACF84416.1| unknown [Zea mays]
gi|194701704|gb|ACF84936.1| unknown [Zea mays]
gi|413923412|gb|AFW63344.1| hypothetical protein ZEAMMB73_127996 [Zea mays]
gi|413923413|gb|AFW63345.1| hypothetical protein ZEAMMB73_127996 [Zea mays]
Length = 139
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
KPKRPPSAFFVF+ EFR+ ++ ++P +V+AV KAAG KW+SMS EK PY +A + K
Sbjct: 33 KPKRPPSAFFVFMSEFRQEYQAQHPGNKSVAAVSKAAGEKWRSMSEQEKQPYVDQAGQKK 92
Query: 114 SEYGK 118
+Y K
Sbjct: 93 QDYEK 97
>gi|125559825|gb|EAZ05273.1| hypothetical protein OsI_27476 [Oryza sativa Indica Group]
gi|125559834|gb|EAZ05282.1| hypothetical protein OsI_27485 [Oryza sativa Indica Group]
Length = 204
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
K KRPP+AFF+F+ +FRK +K E+P+ +VSAV K G +WKSMS +K PY KA +LK
Sbjct: 91 KGKRPPTAFFLFMSDFRKEYKAEHPDNKSVSAVAKEGGERWKSMSDEDKKPYLDKAAELK 150
Query: 114 SEY 116
+EY
Sbjct: 151 AEY 153
>gi|195619220|gb|ACG31440.1| HMG1/2-like protein [Zea mays]
Length = 139
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 53/77 (68%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
KPKRPPSAFFVF+ EFR+ ++ +P +V+ V KAAG KW++MS EK PY +A + K
Sbjct: 32 KPKRPPSAFFVFMSEFRQQYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQKK 91
Query: 114 SEYGKKMNAYNKKQVTN 130
+Y K ++KK+ T+
Sbjct: 92 QDYEKTKANFDKKESTS 108
>gi|125527178|gb|EAY75292.1| hypothetical protein OsI_03182 [Oryza sativa Indica Group]
Length = 133
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 55/77 (71%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
D +PK+PP+AFF F+E+FRKT+K+ENP+V ++ VGKA G KW +M+ E+ Y A
Sbjct: 45 DRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFEERVKYYDIAT 104
Query: 111 KLKSEYGKKMNAYNKKQ 127
+ ++EY K + ++KK+
Sbjct: 105 EKRAEYEKPVAEFDKKK 121
>gi|115474323|ref|NP_001060758.1| Os08g0101100 [Oryza sativa Japonica Group]
gi|38637289|dbj|BAD03552.1| putative HMG type nucleosome/chromatin assembly factor D [Oryza
sativa Japonica Group]
gi|113622727|dbj|BAF22672.1| Os08g0101100 [Oryza sativa Japonica Group]
gi|125601889|gb|EAZ41214.1| hypothetical protein OsJ_25719 [Oryza sativa Japonica Group]
gi|213959174|gb|ACJ54921.1| HMG type nucleosome/chromatin assembly factor [Oryza sativa
Japonica Group]
gi|215697671|dbj|BAG91665.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
K KRPP+AFF+F+ +FRK +K E+P+ +VSAV K G +WKSMS +K PY KA +LK
Sbjct: 91 KGKRPPTAFFLFMSDFRKEYKAEHPDNKSVSAVAKEGGERWKSMSDEDKKPYLDKAAELK 150
Query: 114 SEY 116
+EY
Sbjct: 151 AEY 153
>gi|1845195|emb|CAA69605.1| HMGc1 [Zea mays]
gi|5441504|emb|CAB46753.1| HMGc1 protein [Zea mays]
gi|194690322|gb|ACF79245.1| unknown [Zea mays]
gi|194704052|gb|ACF86110.1| unknown [Zea mays]
gi|219885481|gb|ACL53115.1| unknown [Zea mays]
gi|413938184|gb|AFW72735.1| HMG-like nucleosome/chromatin assembly factor D isoform 1 [Zea
mays]
gi|413938185|gb|AFW72736.1| HMG-like nucleosome/chromatin assembly factor D isoform 2 [Zea
mays]
Length = 139
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 53/77 (68%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
KPKRPPSAFFVF+ EFR+ ++ +P +V+ V KAAG KW++MS EK PY +A + K
Sbjct: 32 KPKRPPSAFFVFMSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQKK 91
Query: 114 SEYGKKMNAYNKKQVTN 130
+Y K ++KK+ T+
Sbjct: 92 QDYEKTKANFDKKESTS 108
>gi|62955511|ref|NP_001017769.1| high mobility group protein B3 [Danio rerio]
gi|62202670|gb|AAH93186.1| High-mobility group box 3b [Danio rerio]
gi|182890656|gb|AAI64996.1| Hmgb3b protein [Danio rerio]
Length = 198
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GK+ +K KKDPN P+RPPS FF+F E R K +NP++ + V K GG W ++S +E
Sbjct: 81 GKKGRKQKKDPNAPRRPPSGFFLFCAEQRPIIKAQNPSL-GIGDVAKKLGGMWNNLSDSE 139
Query: 102 KAPYESKAEKLKSEYGKKMNAY 123
K P+ S A+KLK +Y K M Y
Sbjct: 140 KQPFLSNADKLKDKYQKDMAFY 161
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK DP KPK SA+ F++ R+ K+NP VT S K +WK+MSP EK +E
Sbjct: 2 AKGDPGKPKGKMSAYAYFVKTCREEHNKKNPGVTVNFSEFSKKCSERWKTMSPKEKTKFE 61
Query: 107 SKAEKLKSEYGKKMNAYN 124
A++ K+ Y ++M YN
Sbjct: 62 DLAKQDKARYDQEMMHYN 79
>gi|356510782|ref|XP_003524113.1| PREDICTED: high mobility group B protein 14-like [Glycine max]
Length = 165
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 52/85 (61%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K K D K K+P S FF FLE+FRK F+ NP+V + +GKA+ KWK+M+ EKA Y
Sbjct: 59 KQKFDAMKQKKPLSGFFYFLEDFRKEFQVRNPDVKSKRDIGKASAKKWKTMTYEEKAQYF 118
Query: 107 SKAEKLKSEYGKKMNAYNKKQVTNL 131
A K E+ M +NKK ++NL
Sbjct: 119 DIATKKHDEFDSAMAEFNKKMISNL 143
>gi|221219844|gb|ACM08583.1| High mobility group protein B2 [Salmo salar]
Length = 211
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKRPPSAFFVF EFR T K+E P + + K G W +P +K P+E K
Sbjct: 91 KKDPNAPKRPPSAFFVFSAEFRPTVKQEFPGCS-IGQCAKKLGIMWGQQTPTQKQPFEEK 149
Query: 109 AEKLKSEYGKKMNAYNKKQVTNLVPF 134
A +L+ +Y K M AY VP
Sbjct: 150 ALRLREKYDKDMAAYRSGANVKRVPM 175
>gi|82658290|ref|NP_001032501.1| high mobility group protein B2 [Danio rerio]
gi|81294190|gb|AAI07992.1| Zgc:123215 [Danio rerio]
Length = 213
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFFVF + R K +NP ++ + + K G W +SP EK+PYE KA
Sbjct: 91 DPNAPKRPPSAFFVFCSDHRPKVKGDNPGIS-IGDIAKKLGEMWSKLSPKEKSPYEQKAM 149
Query: 111 KLKSEYGKKMNAYNKKQV 128
KLK +Y K + AY K V
Sbjct: 150 KLKEKYEKDVAAYRAKGV 167
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDPNKP+ S++ F++ R+ KK+NP + S K +W++MS EK +E
Sbjct: 3 KDPNKPRGKTSSYAFFVQTCREEHKKKNPGTSVNFSEFSKKCSERWRTMSSKEKGKFEEM 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 AKTDKVRYDREMKNY 77
>gi|225709792|gb|ACO10742.1| High mobility group protein B2 [Caligus rogercresseyi]
Length = 215
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
GSK GKR KKDPN PKRPPSAFFVF E R K +NP + + + K G W
Sbjct: 83 GSKAAGKR----KKDPNAPKRPPSAFFVFCAEHRGRIKADNPGM-GIGDIAKQLGLLWGK 137
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
+P +K P+E+KA KLK +Y K + AY K
Sbjct: 138 QTPKDKLPHEAKATKLKEKYEKDVAAYKAK 167
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDPNKPK S++ F+ R+ KK++P + S K +W++MS EK +E
Sbjct: 4 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDM 63
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y K M Y
Sbjct: 64 AKGDKVRYDKDMKGY 78
>gi|346472777|gb|AEO36233.1| hypothetical protein [Amblyomma maculatum]
Length = 208
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 52/68 (76%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
NKPKR P+AFF+F+++FRK +K+ +P+ +V++V K G +W+SM+ EK PY +A +L
Sbjct: 102 NKPKRAPTAFFLFMDDFRKEYKELHPDNKSVASVAKEGGERWRSMTIEEKKPYTDRAAEL 161
Query: 113 KSEYGKKM 120
K+EY K++
Sbjct: 162 KAEYVKEI 169
>gi|222087985|gb|ACM41855.1| high mobility group box 2-like protein [Epinephelus coioides]
Length = 212
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFFVF E R K+E P ++ + K G W + S EKAPYE+KA
Sbjct: 87 DPNAPKRPPSAFFVFCSEHRPRIKEECPGIS-IGDTAKKLGELWSTQSSKEKAPYEAKAA 145
Query: 111 KLKSEYGKKMNAYNKKQVT 129
KLK +Y K++ AY K V+
Sbjct: 146 KLKEKYEKEVAAYRAKGVS 164
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
NKP+ S++ F+ + R+ K+++P + + K +WK+MS EKA +E A+
Sbjct: 1 NKPRGKTSSYAFFIADCREEHKRKHPGTSVGFAEFSKKCSERWKTMSAKEKAKFEELAKT 60
Query: 112 LKSEYGKKMNAY 123
K Y ++M Y
Sbjct: 61 DKIRYDREMKTY 72
>gi|609553|gb|AAA74556.1| HMG-T2 [Oncorhynchus mykiss]
Length = 215
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
GSK GKR KKDPN PKRPPSAFFVF E R K +NP + + + K G W
Sbjct: 83 GSKAAGKR----KKDPNAPKRPPSAFFVFCAEHRGRIKADNPGM-GIGDIAKQLGLLWGK 137
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
+P +K P+E+KA KLK +Y K + AY K
Sbjct: 138 QTPKDKQPHEAKAAKLKEKYEKDVAAYKAK 167
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDPNKPK S++ F+ R+ KK++P + S K +W++MS EK +E
Sbjct: 4 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDM 63
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y K M Y
Sbjct: 64 AKGDKVRYDKDMKGY 78
>gi|221221606|gb|ACM09464.1| High mobility group protein B2 [Salmo salar]
gi|223646184|gb|ACN09850.1| High mobility group protein B2 [Salmo salar]
gi|223646756|gb|ACN10136.1| High mobility group protein B2 [Salmo salar]
gi|223672031|gb|ACN12197.1| High mobility group protein B2 [Salmo salar]
gi|223672611|gb|ACN12487.1| High mobility group protein B2 [Salmo salar]
Length = 214
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
GSK GKR KKDPN PKRPPSAFFVF E R K +NP + + + K G W
Sbjct: 83 GSKAAGKR----KKDPNAPKRPPSAFFVFCAEHRGRIKADNPGM-GIGDIAKQLGLLWGK 137
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
+P +K P+E+KA KLK +Y K + AY K
Sbjct: 138 QTPKDKQPHEAKAAKLKEKYEKDVAAYKAK 167
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDPNKPK S++ F+ R+ KK++P + S K +W++MS EK +E
Sbjct: 4 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDM 63
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y K M Y
Sbjct: 64 AKGDKVRYDKDMKGY 78
>gi|339716048|gb|AEJ88271.1| putative HMG DNA-binding protein [Wolffia arrhiza]
Length = 148
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 61/79 (77%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKR PSAFFVFLEEFRK +K+++P+ +V+AVGKAAG KW+SMS ++KAPY +K+
Sbjct: 37 DPNKPKRAPSAFFVFLEEFRKEYKEKHPDNKSVAAVGKAAGAKWRSMSDSDKAPYVNKSN 96
Query: 111 KLKSEYGKKMNAYNKKQVT 129
K K+E K KKQ T
Sbjct: 97 KRKAEVQKTAAVNAKKQET 115
>gi|326525246|dbj|BAK07893.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 48/63 (76%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
K KRPP+AFF+F+++FR FK +P+ V+AVGKAAG KW+SM+ EK PY +A++LK
Sbjct: 100 KAKRPPTAFFLFMKDFRVEFKTSHPDEKGVAAVGKAAGEKWRSMTEEEKKPYNDQAKELK 159
Query: 114 SEY 116
++
Sbjct: 160 AQL 162
>gi|213514690|ref|NP_001133170.1| high-mobility group box 2 [Salmo salar]
gi|197632301|gb|ACH70874.1| high-mobility group box 2 [Salmo salar]
gi|221219834|gb|ACM08578.1| High mobility group protein B2 [Salmo salar]
gi|221220870|gb|ACM09096.1| High mobility group protein B2 [Salmo salar]
gi|223646276|gb|ACN09896.1| High mobility group protein B2 [Salmo salar]
gi|223646962|gb|ACN10239.1| High mobility group protein B2 [Salmo salar]
gi|223672123|gb|ACN12243.1| High mobility group protein B2 [Salmo salar]
gi|223672825|gb|ACN12594.1| High mobility group protein B2 [Salmo salar]
Length = 214
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
GSK GKR KKDPN PKRPPSAFFVF E R K +NP + + + K G W
Sbjct: 83 GSKAAGKR----KKDPNAPKRPPSAFFVFCAEHRGRIKADNPGM-GIGDIAKQLGLLWGK 137
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
+P +K P+E+KA KLK +Y K + AY K
Sbjct: 138 QTPKDKLPHEAKAAKLKEKYEKDVAAYKAK 167
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDPNKPK S++ F+ R+ KK++P + S K +W++MS EK +E
Sbjct: 4 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDM 63
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y K M Y
Sbjct: 64 AKGDKVRYDKDMKGY 78
>gi|85000895|ref|XP_955166.1| high-mobility-group (HMG) protein [Theileria annulata strain
Ankara]
gi|65303312|emb|CAI75690.1| high-mobility-group (HMG) protein, putative [Theileria annulata]
Length = 94
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVT-AVSAVGKAAGGKWKS 96
+K GK+ K+AKKDPN PKR S++ F +E R ++NP++ V+AVGK G W S
Sbjct: 6 AKSAGKKSKRAKKDPNAPKRALSSYMFFAKEKRAELVRDNPDLARDVAAVGKLVGAAWNS 65
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+ +EKAPYE AE ++ Y K+ AYNK
Sbjct: 66 LDESEKAPYEKLAEADRARYEKEKAAYNK 94
>gi|225708606|gb|ACO10149.1| High mobility group protein B2 [Osmerus mordax]
Length = 216
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G + K KKDPN PKRPPSAFFVF + R K E+P ++ + + K G W +P
Sbjct: 82 KGTKVGKRKKDPNAPKRPPSAFFVFCSDHRARIKGEHPGIS-IGDIAKKLGELWSKQTPK 140
Query: 101 EKAPYESKAEKLKSEYGKKMNAYNKK 126
+K PYE+KA KLK +Y K + AY K
Sbjct: 141 DKVPYEAKAGKLKEKYEKDVAAYRAK 166
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDPNKP+ S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 4 KDPNKPRGKTSSYAFFVQTCREEHKKKHPGTSVNFSEFSKKCSERWKTMSAKEKVKFEDL 63
Query: 109 AEKLKSEYGKKMNAY 123
A+ K + ++M Y
Sbjct: 64 AKGDKVRFDREMKGY 78
>gi|242053921|ref|XP_002456106.1| hypothetical protein SORBIDRAFT_03g030540 [Sorghum bicolor]
gi|241928081|gb|EES01226.1| hypothetical protein SORBIDRAFT_03g030540 [Sorghum bicolor]
Length = 109
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 59/92 (64%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
S KR+ + + K D PK+PP+AFF F+E+FRK +K+E P+V ++ +GKA G KW
Sbjct: 6 SSPKRKSRPKPAGKGDRRAPKKPPTAFFYFMEDFRKVYKQEKPSVKSMQEIGKACGEKWN 65
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
+M+ EK Y A + ++E+ K M YNKK+
Sbjct: 66 TMAFEEKVKYYDIATEKRAEFEKAMIEYNKKK 97
>gi|162461550|ref|NP_001105075.1| high mobility group box protein2 [Zea mays]
gi|17017394|gb|AAL33651.1|AF440222_1 HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length = 139
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
KPKRPPSAFF F+ EFR+ ++ +P +V+ V KAAG KW++MS EK PY +A + K
Sbjct: 32 KPKRPPSAFFAFMSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQKK 91
Query: 114 SEYGKKMNAYNKKQVTN 130
+Y K ++KK+ T+
Sbjct: 92 QDYEKTKANFDKKESTS 108
>gi|297665615|ref|XP_002811141.1| PREDICTED: high mobility group protein B4 [Pongo abelii]
Length = 189
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 7/104 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GK +K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 62 ALAKLDKARYQEEMMNYVGKTKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
V KA G W + + EK PYE +A L+++Y +++ Y K++
Sbjct: 122 Q-VAKATGKMWSAATDLEKHPYEQRAALLRAKYFEELELYRKQR 164
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFEEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|357144307|ref|XP_003573245.1| PREDICTED: high mobility group B protein 7-like [Brachypodium
distachyon]
Length = 218
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N KRPP+AFF+F+++FR FK +P+ VSAVGKAAG KWK+M+ EK PY +A++L
Sbjct: 99 NGKKRPPTAFFIFMKDFRLEFKASHPDEKGVSAVGKAAGVKWKAMTDEEKKPYLDQAKEL 158
Query: 113 KSEY 116
K+++
Sbjct: 159 KAKF 162
>gi|335892928|gb|AEH59759.1| high mobility group box 1 [Lethenteron camtschaticum]
Length = 208
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G+R + KKDPN PKRPPSAFF++ E+R + ENP +T + ++ K G W +
Sbjct: 82 KGERGSRKKKDPNAPKRPPSAFFIYCAEYRSKVRAENPGLT-IGSIAKKLGEMWNNAPAD 140
Query: 101 EKAPYESKAEKLKSEYGKKMNAYNKK 126
EK+ YE K KLK +Y K M +Y K
Sbjct: 141 EKSIYERKTAKLKEKYDKDMASYRSK 166
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
S++ F++ R+ KK+NP + + K +WK+MS EK +E A+ K Y +
Sbjct: 14 SSYAYFVQTCREEHKKKNPEASVNFAEFSKKCSERWKTMSEKEKTRFEDMAKVDKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKTY 78
>gi|1419611|emb|CAA67363.1| HMG [Lampetra fluviatilis]
Length = 208
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G+R + KKDPN PKRPPSAFF++ E+R + ENP +T + ++ K G W +
Sbjct: 82 KGERGSRKKKDPNAPKRPPSAFFIYCAEYRSKVRAENPGLT-IGSIAKKLGEMWNNAPAD 140
Query: 101 EKAPYESKAEKLKSEYGKKMNAYNKK 126
EK+ YE K KLK +Y K M +Y K
Sbjct: 141 EKSIYERKTAKLKEKYDKDMASYRSK 166
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
S++ F++ R+ KK+NP + + K +WK+MS EK +E A+ K Y +
Sbjct: 14 SSYAYFVQTCREEHKKKNPEASVNFAEFSKKCSERWKTMSEKEKTRFEDMAKVDKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKTY 78
>gi|225195621|gb|ACN82088.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K+E P ++ + V K G W S EK PY
Sbjct: 74 KKRFKDPNAPKRPPSAFFIFCAEFRPKVKEETPGLS-IGDVAKKLGEMWNKTSSEEKQPY 132
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA +LK +Y K + AY K
Sbjct: 133 EKKAARLKEKYEKDITAYRSK 153
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
S++ F++ R+ KK++P T S K +WK+MS EK +E A+ K+ Y +
Sbjct: 2 SSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDMAKLDKARYER 61
Query: 119 KMNAY 123
+M Y
Sbjct: 62 EMKNY 66
>gi|297812491|ref|XP_002874129.1| hypothetical protein ARALYDRAFT_910356 [Arabidopsis lyrata subsp.
lyrata]
gi|297319966|gb|EFH50388.1| hypothetical protein ARALYDRAFT_910356 [Arabidopsis lyrata subsp.
lyrata]
Length = 193
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
EKK+ NKPKRP +AFF+F+ +FRKTFK E+ A A K G KWKS++ EK
Sbjct: 105 EKKSSSTSNKPKRPLTAFFIFMNDFRKTFKTEHNGSLAKDA-AKIGGEKWKSLTEEEKKV 163
Query: 105 YESKAEKLKSEYGKKMNAYNKKQVTNLVPFFN 136
Y KA +LK+EY K + + + + + FFN
Sbjct: 164 YLDKAAELKAEYNKSLESNDADE--EVCAFFN 193
>gi|432951224|ref|XP_004084757.1| PREDICTED: high mobility group protein B2-like [Oryzias latipes]
Length = 221
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFFVF + R K++NP ++ + + K G W + S +KAPYE+KA
Sbjct: 114 DPNAPKRPPSAFFVFCSDHRPKIKEDNPGIS-IGDIAKKLGELWATQSAKDKAPYEAKAA 172
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + AY K
Sbjct: 173 KLKEKYEKDVAAYRAK 188
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDPNKP+ SA+ F+ R+ KK++P + + K +WK+MS EK ++
Sbjct: 26 KDPNKPRGKTSAYAYFVATCREEHKKKHPGTSVNFAEFSKKCSERWKTMSSKEKVKFDEL 85
Query: 109 AEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 86 AKTDKARYDREMKTY 100
>gi|281349442|gb|EFB25026.1| hypothetical protein PANDA_005395 [Ailuropoda melanoleuca]
Length = 181
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 66/105 (62%), Gaps = 7/105 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GK++K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 62 ALAKLDKARYQEEMMNYVGKKKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQV 128
V KA+G W + + AEK PYE +A L+++Y +++ Y K+++
Sbjct: 122 Q-VAKASGKMWSATTDAEKQPYEQRAALLRAKYQEELEIYRKQRI 165
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
+PK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 8 RPKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|410932269|ref|XP_003979516.1| PREDICTED: high mobility group-T protein-like [Takifugu rubripes]
gi|410933007|ref|XP_003979884.1| PREDICTED: high mobility group-T protein-like [Takifugu rubripes]
Length = 209
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F EFR K E+P +T + V K G W + + +K PYE KA
Sbjct: 95 DPNAPKRPPSAFFIFCSEFRPKVKGEHPGLT-IGEVAKKLGELWNNTNSEDKQPYEKKAS 153
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + AY +K
Sbjct: 154 KLKEKYEKDVAAYRQK 169
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
++ KP+ S++ F++ R+ KK++P+ + S + +WK+MS EK +E
Sbjct: 7 REAGKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSRKCSERWKTMSVKEKGKFEDL 66
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 67 AKQDKVRYDREMMDY 81
>gi|301763549|ref|XP_002917185.1| PREDICTED: high mobility group protein B4-like [Ailuropoda
melanoleuca]
Length = 193
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 66/105 (62%), Gaps = 7/105 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GK++K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 64 ALAKLDKARYQEEMMNYVGKKKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 123
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQV 128
V KA+G W + + AEK PYE +A L+++Y +++ Y K+++
Sbjct: 124 Q-VAKASGKMWSATTDAEKQPYEQRAALLRAKYQEELEIYRKQRI 167
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
+PK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 10 RPKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|255544145|ref|XP_002513135.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223548146|gb|EEF49638.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 196
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 58 PPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYG 117
PP+AFF+FL+EFRKTFK+ NP+ V V K AG KWK+M+ EK PY KA +LK+EY
Sbjct: 103 PPTAFFIFLDEFRKTFKEANPDSKDVKRVAKEAGEKWKAMTDEEKKPYADKATELKAEYD 162
Query: 118 KKMNAYN 124
K + N
Sbjct: 163 KALGEVN 169
>gi|349604600|gb|AEQ00107.1| High mobility group protein B3-like protein, partial [Equus
caballus]
Length = 118
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY
Sbjct: 2 KKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYN 60
Query: 107 SKAEKLKSEYGKKMNAYNKK 126
+KA KLK +Y K + Y K
Sbjct: 61 NKAAKLKEKYEKDVADYKSK 80
>gi|148235321|ref|NP_001089163.1| high mobility group box 3 [Xenopus laevis]
gi|55824420|gb|AAV66347.1| high mobility group B3b protein [Xenopus laevis]
gi|114108280|gb|AAI23148.1| LOC734200 protein [Xenopus laevis]
Length = 201
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G ++GKR K DPN PKRPPS FF+F EFR K NP ++ + + K G W
Sbjct: 77 DFGPVKKGKRNK----DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDIAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
++S EK PY +KA KLK +Y K + Y K
Sbjct: 132 NNLSDGEKQPYNNKAAKLKEKYEKDVADYKSK 163
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK+DP KPK SA+ F++ R+ KK+NP + + K +W+SMS EK+ +E
Sbjct: 2 AKRDPKKPKGKMSAYAYFVQTCREEHKKKNPEIPVNFAEFSKKCSERWRSMSGKEKSKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M +
Sbjct: 62 DLAKADKVRYDREMKDF 78
>gi|357139210|ref|XP_003571177.1| PREDICTED: high mobility group B protein 13-like [Brachypodium
distachyon]
Length = 537
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+KPK+P SA+FV+ +E R E NV +GK G +WKSM+ A+KAPYE A
Sbjct: 325 DPSKPKQPMSAYFVYSQERRAALVAEKKNV---PEIGKITGEEWKSMTDAQKAPYEEVAS 381
Query: 111 KLKSEYGKKMNAYNKKQV 128
K K EY K+M Y +K++
Sbjct: 382 KQKEEYHKQMEVYKQKKL 399
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PK+P S+F +F +E RK +E P V S + KWK +S EK + KA
Sbjct: 450 DPNRPKKPASSFLLFSKEARKQLVEERPGVNN-STINALISVKWKELSGTEKKTWSEKAA 508
Query: 111 KLKSEYGKKMNAYN 124
+ + Y ++M Y
Sbjct: 509 EGMAAYKREMEEYT 522
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N+ K+P A+ ++ ++ KKEN + V A G KWK++S EK PYE + +
Sbjct: 207 NERKKPCPAYLLWCKDQWAEIKKENSDAD-FKEVSNALGAKWKTISAEEKQPYEERYRQE 265
Query: 113 KSEY 116
K Y
Sbjct: 266 KEAY 269
>gi|303304752|emb|CBD77423.1| high mobility group box 2 protein [Plecoglossus altivelis]
Length = 215
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFFVF + R K ENP ++ + + K G W +P +K PYE+KA
Sbjct: 92 DPNAPKRPPSAFFVFCSDHRARIKGENPGIS-IGDIAKKLGELWSKQTPKDKQPYEAKAG 150
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + AY K
Sbjct: 151 KLKEKYEKDVAAYRAK 166
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDPNKP+ S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 4 KDPNKPRGKTSSYAFFVQTCREEHKKKHPGTSVNFSEFSKKCSERWKTMSAKEKVKFEDL 63
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 64 AKGDKVRYDREMKGY 78
>gi|225195617|gb|ACN82086.1| high-mobility group box 1 [Carassius auratus]
gi|225195619|gb|ACN82087.1| high-mobility group box 1 [Megalobrama amblycephala]
gi|225195623|gb|ACN82089.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K+E P ++ + V K G W S EK P+
Sbjct: 74 KKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGLS-IGDVAKKLGEMWNKTSAEEKQPF 132
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA +LK +Y K + AY K
Sbjct: 133 EKKAARLKEKYEKDITAYRSK 153
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
S++ F++ R+ KK++P T S K +WK+MS EK +E A++ K Y +
Sbjct: 2 SSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDMAKQDKVRYER 61
Query: 119 KMNAY 123
+M Y
Sbjct: 62 EMKNY 66
>gi|609551|gb|AAA58771.1| HMG-1 [Oncorhynchus mykiss]
Length = 204
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P ++ + V K G KW +++ +K PY
Sbjct: 85 KKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS-IGDVAKKLGEKWNNLTAEDKVPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKASKLKEKYEKDITAYRNK 164
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|1085210|pir||S48708 high-mobility-group-1 protein - trout
Length = 204
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P ++ + V K G KW +++ +K PY
Sbjct: 85 KKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS-IGDVAKKLGEKWNNLTAEDKVPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKASKLKEKYEKDITAYRNK 164
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R KK++P + S K +WK+MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRIEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|320091041|gb|ADW08807.1| high mobility group box X [Lethenteron camtschaticum]
Length = 225
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
++ KKDPN PKRPPSAFF+F +FR K +NP + + + K G W + KAPY
Sbjct: 90 QRKKKDPNAPKRPPSAFFIFCADFRPQIKADNPGMV-IGTIAKRLGEMWGRQTNENKAPY 148
Query: 106 ESKAEKLKSEYGKKMNAYNK 125
E KA LK +Y K + AY +
Sbjct: 149 EHKANILKEKYKKDVAAYQR 168
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVT-AVSAVGKAAGGKWKSMSPAEKAPYESKA 109
DP+KP+ S++ F++ R+ KK++PN + A + + +WK +SP EK +E A
Sbjct: 5 DPSKPRGRMSSYAYFVQTCREEHKKKHPNDSVAFTDFSRKCSERWKGLSPKEKLRFEDLA 64
Query: 110 EKLKSEYGKKMNAY 123
K+ Y +M Y
Sbjct: 65 RADKTRYDTEMKDY 78
>gi|148223673|ref|NP_001079576.1| HMG-X protein [Xenopus laevis]
gi|639691|dbj|BAA06440.1| HMG-X protein [Xenopus laevis]
Length = 212
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G+ + K KKDPN PKRPPSAFF+F E R K E P ++ + K G W +P
Sbjct: 82 KGETKGKRKKDPNAPKRPPSAFFIFCSEHRPQIKSETPGLS-IGDTAKKLGELWAEQTPK 140
Query: 101 EKAPYESKAEKLKSEYGKKMNAYNKKQVTNL 131
+K P+E KA KLK +Y K + AY K +++
Sbjct: 141 DKLPHEQKAAKLKEKYEKDVAAYRAKGKSDV 171
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DPNKP+ S++ F++ R+ KK++P+ + S K +WKSMS EK +E
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSDFSKKCSERWKSMSAKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 62 DLAKGDKARYEREMKTY 78
>gi|392333067|ref|XP_003752781.1| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
gi|392353165|ref|XP_001067503.2| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
Length = 212
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY
Sbjct: 99 KKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IEDVVKKLGEMWNNLSDSEKQPYM 157
Query: 107 SKAEKLKSEYGKKMNAY 123
+KA KLK +Y K + Y
Sbjct: 158 TKAAKLKEKYEKDVADY 174
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ K +NP V + K +WK+MS EK+ ++ A+ K YG+
Sbjct: 28 SAYAFFVQTCREEHKTKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYGR 87
Query: 119 KMNAY 123
+M Y
Sbjct: 88 EMKDY 92
>gi|348538096|ref|XP_003456528.1| PREDICTED: high mobility group protein B2-like [Oreochromis
niloticus]
Length = 196
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFFVF + R K++NP ++ + + K G W + S +KAPYE+KA
Sbjct: 91 DPNAPKRPPSAFFVFCSDHRPKIKEDNPGIS-IGDIAKKLGEMWATQSAKDKAPYEAKAA 149
Query: 111 KLKSEYGKKMNAYNKK 126
+LK +Y K + AY K
Sbjct: 150 RLKEKYEKDVAAYRAK 165
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDPNKP+ S++ F+ R+ KK++P + + K +WK+MSP EK +E
Sbjct: 3 KDPNKPRGKTSSYAFFVATCREEHKKKHPGTSVNFAEFSKKCSERWKTMSPKEKGKFEEM 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 AKNDKVRYDREMKTY 77
>gi|49258306|pdb|1J3C|A Chain A, Solution Structure Of The C-Terminal Domain Of The Hmgb2
Length = 79
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKRPPSAFF+F E+R K E+P ++ + K G W S +K PYE K
Sbjct: 3 KKDPNAPKRPPSAFFLFCSEYRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQK 61
Query: 109 AEKLKSEYGKKMNAYNKK 126
A KLK +Y K + AY K
Sbjct: 62 AAKLKEKYEKDIAAYRAK 79
>gi|229367676|gb|ACQ58818.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 197
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
++KK KDPN PKRPPSAFF+F +FR K E+P +T + K G W S S K
Sbjct: 83 QKKKRFKDPNAPKRPPSAFFLFCGDFRPKVKSEHPGLT-IGDTAKKLGEMWNSSSAENKQ 141
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQVTN 130
PYE KA KLK +Y K + AY K +
Sbjct: 142 PYERKAAKLKEKYDKDIVAYRTKGTVD 168
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KPK S++ F++ R+ KK++P + + K +WK+MS K +E
Sbjct: 3 KDPRKPKGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSQKGKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAYN 124
A+ K Y + M Y+
Sbjct: 63 AKLDKVRYERDMKNYD 78
>gi|27881711|gb|AAH44715.1| MGC52578 protein [Xenopus laevis]
Length = 212
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G+ + K KKDPN PKRPPSAFF+F E R K E P ++ + K G W +P
Sbjct: 82 KGETKGKRKKDPNAPKRPPSAFFIFCSEHRPQIKSETPGLS-IGDTAKKLGELWAEQTPK 140
Query: 101 EKAPYESKAEKLKSEYGKKMNAYNKKQVTNL 131
+K P+E KA KLK +Y K + AY K +++
Sbjct: 141 DKLPHEQKAAKLKEKYEKDVAAYRAKGKSDV 171
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DPNKP+ S++ F++ R+ KK++P+ + S K +WKSMS EK +E
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSEFSKKCSERWKSMSAKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 62 DLAKGDKARYEREMKTY 78
>gi|229365968|gb|ACQ57964.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 197
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
++KK KDPN PKRPPSAFF+F +FR K E+P +T + K G W S S K
Sbjct: 83 QKKKRFKDPNAPKRPPSAFFLFCGDFRPKVKSEHPGLT-IGDTAKKLGEMWNSSSAENKQ 141
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQVTN 130
PYE KA KLK +Y K + AY K +
Sbjct: 142 PYERKAAKLKEKYDKDIVAYRTKGTVD 168
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KPK S++ F++ R+ KK++P + + K +WK+MS EK +E
Sbjct: 3 KDPRKPKGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSQKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAYN 124
A+ K Y + M Y+
Sbjct: 63 AKLDKVRYERDMKNYD 78
>gi|444707322|gb|ELW48604.1| High mobility group protein B4 [Tupaia chinensis]
Length = 189
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 7/104 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ G+R K+ K+DP P+RPPS+F +F ++ K+ENP+ T V
Sbjct: 64 ALAKLDKARYQEEMMNYVGRRRKRRKRDPQAPRRPPSSFILFCQDHYAQLKRENPSWTVV 123
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
V KA+G W M+ EK PYE +A L++ Y +++ Y K++
Sbjct: 124 Q-VAKASGKMWTVMTAVEKQPYEQRAALLRARYQEELEVYRKQR 166
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
+PK S++ FL +R FK++ PN + KWKS+S EKA YE+ A+
Sbjct: 10 RPKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWKSISKHEKAKYEALAKLD 69
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|118343938|ref|NP_001071793.1| transcription factor protein [Ciona intestinalis]
gi|70570759|dbj|BAE06616.1| transcription factor protein [Ciona intestinalis]
Length = 164
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
+KR + K +KD N PK+P +A+F+F+ + R+ KENP++ +++ + K G KW+
Sbjct: 4 TKRSSLKTLKFRKDKNAPKKPLTAYFIFMNDCRQKVIKENPSL-SITEISKLVGKKWRET 62
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYN 124
S +K P+ KA KL+ EY KK+ YN
Sbjct: 63 STKDKEPFNKKAAKLREEYNKKLEKYN 89
>gi|221220328|gb|ACM08825.1| High mobility group protein B3 [Salmo salar]
Length = 203
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR KKA KDPN PKRPPS FFVF E R K ++PN + V K G W +++ +
Sbjct: 82 GKRGKKALKDPNAPKRPPSGFFVFCAEQRPKIKAQHPNF-GIGDVAKKLGEMWNNLTDSN 140
Query: 102 KAPYESKAEKLKSEYGKKMNAY 123
K PY +KA KLK +Y K + Y
Sbjct: 141 KQPYLAKANKLKEKYQKDVADY 162
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK D KPK SA+ F++ R+ K +NP + S K G+WK+MSP EK+ +E
Sbjct: 2 AKGDARKPKGKMSAYAYFVQTCREEHKNKNPEIPVNFSEFSKKCSGRWKTMSPKEKSKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
+A++ K+ Y +M +Y
Sbjct: 62 DQAKQDKARYDLEMTSY 78
>gi|221220618|gb|ACM08970.1| High mobility group protein B3 [Salmo salar]
gi|223646914|gb|ACN10215.1| High mobility group protein B3 [Salmo salar]
gi|223672777|gb|ACN12570.1| High mobility group protein B3 [Salmo salar]
Length = 201
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR KKA KDPN PKRPPS FFVF E R K ++PN + V K G W +++ +
Sbjct: 82 GKRGKKALKDPNAPKRPPSGFFVFCAEQRPKIKAQHPNF-GIGDVAKKLGEMWNNLTDSN 140
Query: 102 KAPYESKAEKLKSEYGKKMNAY 123
K PY +KA KLK +Y K + Y
Sbjct: 141 KQPYLAKANKLKEKYQKDVADY 162
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK D KPK SA+ F++ R+ K +NP + S K G+WK+MSP EK+ +E
Sbjct: 2 AKGDARKPKGKMSAYAYFVQTCREEHKNKNPEIPVNFSEFSKKCSGRWKTMSPKEKSKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
+A++ K+ Y +M +Y
Sbjct: 62 DQAKQDKARYDSEMTSY 78
>gi|221219912|gb|ACM08617.1| High mobility group protein B3 [Salmo salar]
Length = 201
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR KKA KDPN PKRPPS FFVF E R K ++PN + V K G W +++ +
Sbjct: 82 GKRGKKALKDPNAPKRPPSGFFVFCAEQRPKIKAQHPNF-GIGDVAKKLGEMWNNLTDSN 140
Query: 102 KAPYESKAEKLKSEYGKKMNAY 123
K PY +KA KLK +Y K + Y
Sbjct: 141 KQPYLAKANKLKEKYQKDVADY 162
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK D KPK SA+ F++ R+ K +NP + S K G+WK+MSP EK+ +E
Sbjct: 2 AKGDARKPKGKMSAYAYFVQTCREEHKNKNPEIPVNFSEFSKKCSGRWKTMSPKEKSKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
+A++ K+ Y +M +Y
Sbjct: 62 DQAKQDKARYDSEMTSY 78
>gi|431920081|gb|ELK18129.1| High mobility group protein B3 [Pteropus alecto]
Length = 255
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 141 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYNNKAA 199
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 200 KLKEKYEKDVADYKSK 215
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 66 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 125
Query: 119 KMNAY 123
+M Y
Sbjct: 126 EMKDY 130
>gi|347921933|ref|NP_990626.2| high mobility group protein B3 [Gallus gallus]
Length = 217
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F EFR K NP ++ + V K G W ++S EK PY +KA
Sbjct: 104 DPNAPKRPPSAFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDGEKQPYNNKAA 162
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 163 KLKEKYEKDVADYKSK 178
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EKA ++ A+ K Y +
Sbjct: 29 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYDR 88
Query: 119 KMNAY 123
+M Y
Sbjct: 89 EMKDY 93
>gi|18420676|ref|NP_568431.1| high-mobility group B6 protein [Arabidopsis thaliana]
gi|75245985|sp|Q8LDF9.1|HMGB7_ARATH RecName: Full=High mobility group B protein 7; AltName:
Full=Nucleosome/chromatin assembly factor group D 07;
Short=Nucleosome/chromatin assembly factor group D 7
gi|21554154|gb|AAM63233.1| unknown [Arabidopsis thaliana]
gi|26452394|dbj|BAC43282.1| unknown protein [Arabidopsis thaliana]
gi|332005781|gb|AED93164.1| high-mobility group B6 protein [Arabidopsis thaliana]
Length = 241
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
EKK+ NKPKRP +AFF+F+ +FRKTFK E+ A A K G KWKS++ EK
Sbjct: 105 EKKSSSTSNKPKRPLTAFFIFMSDFRKTFKSEHNGSLAKDA-AKIGGEKWKSLTEEEKKV 163
Query: 105 YESKAEKLKSEYGKKM 120
Y KA +LK+EY K +
Sbjct: 164 YLDKAAELKAEYNKSL 179
>gi|18403553|ref|NP_565788.1| high mobility group (HMG1/2) domain-containing protein [Arabidopsis
thaliana]
gi|75219838|sp|O64702.2|HMG14_ARATH RecName: Full=High mobility group B protein 14; AltName:
Full=Nucleosome/chromatin assembly factor group D 14
gi|20197083|gb|AAC26692.2| putative HMG protein [Arabidopsis thaliana]
gi|20197160|gb|AAM14948.1| putative HMG protein [Arabidopsis thaliana]
gi|21536857|gb|AAM61189.1| putative HMG protein [Arabidopsis thaliana]
gi|26452914|dbj|BAC43535.1| putative HMG protein [Arabidopsis thaliana]
gi|28973511|gb|AAO64080.1| putative HMG protein [Arabidopsis thaliana]
gi|330253881|gb|AEC08975.1| high mobility group (HMG1/2) domain-containing protein [Arabidopsis
thaliana]
Length = 151
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKS 114
PK+P +AFF FL++FRK +++ENP+V ++ +GK G KWK+M+ EK Y A + +
Sbjct: 63 PKKPATAFFFFLDDFRKQYQEENPDVKSMREIGKTCGEKWKTMTYEEKVKYYDIATEKRE 122
Query: 115 EYGKKMNAYNKK 126
E+ + M Y K+
Sbjct: 123 EFHRAMTEYTKR 134
>gi|185135647|ref|NP_001118186.1| high mobility group-T protein [Oncorhynchus mykiss]
gi|123382|sp|P07746.2|HMGT_ONCMY RecName: Full=High mobility group-T protein; Short=HMG-T; AltName:
Full=HMG-T1; Short=HMG-1
gi|64328|emb|CAA26500.1| unnamed protein product [Oncorhynchus mykiss]
Length = 204
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P ++ + V K G KW +++ +K PY
Sbjct: 85 KKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS-IGDVAKKLGEKWNNLTAEDKVPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA +LK +Y K + AY K
Sbjct: 144 EKKASRLKEKYEKDITAYRNK 164
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTRREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|221221482|gb|ACM09402.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P ++ + V K G KW +++ +K PY
Sbjct: 85 KKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS-IGDVAKKLGEKWNNLTAEDKVPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA +LK +Y K + AY K
Sbjct: 144 EKKAARLKEKYEKDITAYRNK 164
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +W++MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 AKLDKMRYEREMRSY 77
>gi|356528116|ref|XP_003532651.1| PREDICTED: high mobility group protein B2-like [Glycine max]
Length = 234
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query: 51 DPNKPKRPPSAFF----VFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
D KPK+ PSAFF +F+E+FRK F+++NP++ ++ +GKA G KWK+M+ EK Y
Sbjct: 41 DAMKPKKSPSAFFPLFSLFMEDFRKEFQEQNPDIKSMYDIGKACGEKWKTMTYEEKVKYY 100
Query: 107 SKAEKLKSEYGKKMNAYNKK 126
A + + E+ + M +N K
Sbjct: 101 DIASEKRIEFDRAMAKFNNK 120
>gi|729728|sp|P40618.2|HMGB3_CHICK RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|63494|emb|CAA45065.1| HMG2a [Gallus gallus]
Length = 202
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F EFR K NP ++ + V K G W ++S EK PY +KA
Sbjct: 89 DPNAPKRPPSAFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDGEKQPYNNKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EKA ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|444323521|ref|XP_004182401.1| hypothetical protein TBLA_0I02240 [Tetrapisispora blattae CBS 6284]
gi|387515448|emb|CCH62882.1| hypothetical protein TBLA_0I02240 [Tetrapisispora blattae CBS 6284]
Length = 94
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR SA+ F E R + ENP+VT VGK G +WK++S EK
Sbjct: 9 KRSTRRKKDPNAPKRALSAYMFFANETRDIVRSENPDVT-FGQVGKILGERWKALSAEEK 67
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PYE+KAE K Y + YN
Sbjct: 68 VPYETKAEADKKRYESEKELYN 89
>gi|225715078|gb|ACO13385.1| High mobility group protein B3 [Esox lucius]
Length = 204
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR KKAKKDPN PKRPPS FFVF E R K ++P+ + V K G W +++ +
Sbjct: 82 GKRGKKAKKDPNAPKRPPSGFFVFCAEQRPKIKAQHPSF-GIGDVAKKLGEAWNNLTDSS 140
Query: 102 KAPYESKAEKLKSEYGKKMNAYNK 125
K PY +KA KLK +Y K + Y +
Sbjct: 141 KQPYLAKANKLKEKYRKDVADYKR 164
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK D KPK SA+ F++ R+ KK+NP + S K G+WK+MSP EK+ +E
Sbjct: 2 AKGDARKPKGKMSAYAYFVQTCREEHKKKNPEIPVNFSEFSKKCAGRWKTMSPKEKSKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
+A + K+ Y +M +Y
Sbjct: 62 DQANQDKARYESEMTSY 78
>gi|327296079|ref|XP_003232734.1| non-histone chromosomal protein 6 [Trichophyton rubrum CBS 118892]
gi|326465045|gb|EGD90498.1| non-histone chromosomal protein 6 [Trichophyton rubrum CBS 118892]
Length = 102
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KKDPN PKR SA+ +F E R ++ENPN+T VGK G +WK++S ++ PY
Sbjct: 16 EKKKKDPNAPKRGLSAYMIFANEQRAAVREENPNIT-FGQVGKVLGERWKALSDKQRVPY 74
Query: 106 ESKAEKLKSEYGKKMNAYNKKQ 127
E KA K Y + AYN +Q
Sbjct: 75 EEKAATDKQRYEDEKAAYNSRQ 96
>gi|296810682|ref|XP_002845679.1| non-histone chromosomal protein 6 [Arthroderma otae CBS 113480]
gi|238843067|gb|EEQ32729.1| non-histone chromosomal protein 6 [Arthroderma otae CBS 113480]
Length = 103
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
+ K +G+ +K KKDPN PKR SA+ +F E R ++ENPN+T VGK G +WK
Sbjct: 7 TARKAKGRGVEKKKKDPNAPKRGLSAYMIFANEQRAAVREENPNIT-FGQVGKVLGERWK 65
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
++S ++ PYE KA K Y + AYN +Q
Sbjct: 66 ALSDKQRVPYEEKAATDKQRYEDEKAAYNSRQ 97
>gi|342319487|gb|EGU11435.1| Non-histone chromosomal protein [Rhodotorula glutinis ATCC 204091]
Length = 142
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVT------AVSAVGKAAGGKWKSMSPA 100
+AKKDPN PKRP SA+ F ++ R K+ENP+VT ++ +GK G KWK +
Sbjct: 17 RAKKDPNAPKRPLSAYMHFSQDQRSVVKEENPDVTFVGHCESIGEIGKILGAKWKELPED 76
Query: 101 EKAPYESKAEKLKSEYGKKMNAYN 124
E+ PYE KA KS Y K+ AY+
Sbjct: 77 ERKPYEEKASADKSRYEKEKAAYD 100
>gi|196005089|ref|XP_002112411.1| hypothetical protein TRIADDRAFT_56397 [Trichoplax adhaerens]
gi|190584452|gb|EDV24521.1| hypothetical protein TRIADDRAFT_56397 [Trichoplax adhaerens]
Length = 253
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 10/83 (12%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKK----ENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
K DP+KPKRP +A+F FL EFRK K E +T++S G KW++M+PAEKA
Sbjct: 133 KADPDKPKRPQTAYFYFLAEFRKAMKAKGVIEGKKLTSLS------GEKWRAMTPAEKAK 186
Query: 105 YESKAEKLKSEYGKKMNAYNKKQ 127
YE+ K K Y ++M+AY KK+
Sbjct: 187 YEAMVTKDKERYQREMDAYRKKK 209
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 56 KRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSE 115
K+P SA+ F R+ KK + + K G +W++M+ ++K PY+ A + K
Sbjct: 63 KKPKSAYIFFTTSLRQRLKKSGREMPKAHEIAKMCGSEWRAMTASQKKPYDELAARDKQR 122
Query: 116 YGKKMNAYNKK 126
Y ++++ + KK
Sbjct: 123 YMEEISKFRKK 133
>gi|145480005|ref|XP_001426025.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393097|emb|CAK58627.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 8/94 (8%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV--------TAVSAVGKAAGGK 93
K EKK ++DPN PKRP +AFF+F +++R+ + NP + + + + AG K
Sbjct: 20 DKPEKKKERDPNAPKRPLTAFFLFSQKYREKVLERNPGIDLSDYQLEVKLIQISQMAGQK 79
Query: 94 WKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
W+SMS EK PY + + KS+Y + YN+KQ
Sbjct: 80 WQSMSEQEKQPYVDQYNQAKSKYNDDVKEYNEKQ 113
>gi|49258307|pdb|1J3D|A Chain A, Solution Structure Of The C-Terminal Domain Of The Hmgb2
Length = 78
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE K
Sbjct: 2 KKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQK 60
Query: 109 AEKLKSEYGKKMNAYNKK 126
A KLK +Y K + AY K
Sbjct: 61 AAKLKEKYEKDIAAYRAK 78
>gi|9759080|dbj|BAB09558.1| unnamed protein product [Arabidopsis thaliana]
Length = 226
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
EKK+ NKPKRP +AFF+F+ +FRKTFK E+ N + K G KWKS++ EK
Sbjct: 90 EKKSSSTSNKPKRPLTAFFIFMSDFRKTFKSEH-NGSLAKDAAKIGGEKWKSLTEEEKKV 148
Query: 105 YESKAEKLKSEYGKKM 120
Y KA +LK+EY K +
Sbjct: 149 YLDKAAELKAEYNKSL 164
>gi|326475470|gb|EGD99479.1| nucleosome binding protein [Trichophyton tonsurans CBS 112818]
Length = 102
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KKDPN PKR SA+ +F E R ++ENPN+T VGK G +WK++S ++ PY
Sbjct: 16 EKKKKDPNAPKRGLSAYMIFANEQRAAVREENPNIT-FGQVGKVLGERWKALSDKQRVPY 74
Query: 106 ESKAEKLKSEYGKKMNAYNKKQ 127
E KA K Y + AYN +Q
Sbjct: 75 EEKAATDKQRYEDEKAAYNSRQ 96
>gi|297826905|ref|XP_002881335.1| high mobility group family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327174|gb|EFH57594.1| high mobility group family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 152
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAV-SAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
PK+PP+AFF FLE+FRK +++ENP V ++ +GK G KWK+M+ EK Y A + +
Sbjct: 64 PKKPPTAFFFFLEDFRKQYQEENPEVKSMREVIGKTCGEKWKTMTYEEKVKYYDIATEKR 123
Query: 114 SEYGKKMNAYNKK 126
E+ + M Y K+
Sbjct: 124 EEFHRAMTEYTKR 136
>gi|335308835|ref|XP_003361389.1| PREDICTED: high mobility group protein B4-like [Sus scrofa]
Length = 198
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 62/103 (60%), Gaps = 7/103 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ G + K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 64 ALAKLDKARYQEEMRNYVGGKRKRRKRDPQAPRRPPSSFLLFCQDNYAQLKRENPNWS-V 122
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
+ V KA+ W + + +K PYE +A L+++Y ++++ Y K+
Sbjct: 123 AQVAKASARMWSTTTDVDKQPYEQRAALLRAKYHEELSVYQKQ 165
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL + FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 10 KPKANVSSYIHFLLNYSNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 70 KARYQEEMRNY 80
>gi|336272321|ref|XP_003350917.1| hypothetical protein SMAC_04223 [Sordaria macrospora k-hell]
gi|380090684|emb|CCC04854.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 103
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 38 SKRQGKREKK-AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
SK GK EK+ AKKDPN PKR SA+ F E R+ ++ENP VT VGK G +WK+
Sbjct: 8 SKTTGKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVT-FGQVGKILGERWKA 66
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYN 124
+S ++APYE+KA K Y + AYN
Sbjct: 67 LSDKQRAPYEAKAAADKKRYEDEKQAYN 94
>gi|392354293|ref|XP_003751730.1| PREDICTED: high mobility group protein B3-like isoform 1 [Rattus
norvegicus]
Length = 241
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 130 DPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IGDVAKKLGEMWNNLSDSEKQPYMTKAA 188
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 189 KLKEKYEKDVADYKSK 204
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 40 RQGKRE--KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKS 96
R+G+R + AK DP KPK SA+ F++ R+ KK+NP V + K +WK+
Sbjct: 33 REGRRHSVRMAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 92
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAY 123
MS EK+ ++ A+ K Y ++M Y
Sbjct: 93 MSSKEKSKFDEMAKADKVRYDREMKDY 119
>gi|45361297|ref|NP_989226.1| high mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|38969943|gb|AAH63332.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|89267209|emb|CAJ81415.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|89272910|emb|CAJ82928.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
Length = 211
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K E+P T + + K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGST-IGDIAKKLGEMWNNTATDDKLPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 ERKAAKLKEKYEKDVAAYRAK 165
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 MAKADKVRYEREMKTY 78
>gi|395857208|ref|XP_003800997.1| PREDICTED: high mobility group protein B3-like [Otolemur garnettii]
Length = 225
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ V V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-VGDVAKKLGEMWNNLSDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKAMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|148229870|ref|NP_001080585.1| high mobility group box 3 [Xenopus laevis]
gi|27882654|gb|AAH44009.1| Hmgb3-prov protein [Xenopus laevis]
Length = 202
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP +T + V K G W ++S +EK PY +K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIT-IGDVAKKLGEMWNNLSDSEKQPYNNKGA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|410966739|ref|XP_003989887.1| PREDICTED: high mobility group protein B4 [Felis catus]
Length = 193
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GK++K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 64 ALAKLDKARYQEEMMNYGGKKKKRRKRDPYAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 123
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQVTN 130
V KA+G W + + AEK PYE +A L+++Y + + Y K++ N
Sbjct: 124 Q-VAKASGKMWSATTGAEKQPYEQRAALLRAKYQEDLEIYRKQRKAN 169
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
+PK S++ FL +R FK++ PN + + KW+S+S EKA YE+ A+
Sbjct: 10 RPKANVSSYIHFLLNYRNKFKEQQPNTYLSFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|297812105|ref|XP_002873936.1| hypothetical protein ARALYDRAFT_488801 [Arabidopsis lyrata subsp.
lyrata]
gi|297319773|gb|EFH50195.1| hypothetical protein ARALYDRAFT_488801 [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
EKK+ NKPKRP +AFF+F+ +FRKTFK E+ N + K G KW S++ EK
Sbjct: 102 EKKSSSTSNKPKRPLTAFFIFMNDFRKTFKTEH-NGSFAKDAAKIGGEKWMSLTEDEKKV 160
Query: 105 YESKAEKLKSEYGKKMN 121
Y KA +LK+EY K+ N
Sbjct: 161 YLDKAAELKAEYNKRSN 177
>gi|229367846|gb|ACQ58903.1| High mobility group protein B2 [Anoplopoma fimbria]
Length = 213
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFFVF + R K+ENP ++ + + K G W + + +K PYE++A
Sbjct: 92 DPNAPKRPPSAFFVFCSDHRPRIKEENPGIS-IGDIAKKLGEFWSTQTSKDKVPYEARAG 150
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + AY K
Sbjct: 151 KLKEKYEKDVAAYKAK 166
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDPNKP+ S++ F+ R+ KK++P V+ + K +WK+MS EK +E
Sbjct: 3 KDPNKPRGKTSSYAFFVATCREEHKKKHPGVSVGFAEFSKKCSERWKTMSAKEKVKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 AKNDKVRYEREMKTY 77
>gi|346986304|ref|NP_001069753.2| high mobility group protein B3 isoform 1 [Bos taurus]
Length = 274
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 163 DPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IGDVAKKLGEMWNNLSDSEKQPYINKAA 221
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 222 KLKEKYEKDVADYKSK 237
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 88 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 147
Query: 119 KMNAY 123
+M Y
Sbjct: 148 EMKDY 152
>gi|332808386|ref|XP_513298.3| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B4 [Pan
troglodytes]
Length = 186
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 7/103 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 62 ALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
V KA G W +++ EK PYE +A L+++Y +++ Y K+
Sbjct: 122 Q-VAKATGKMWSTVTDLEKHPYEQRAALLRAKYFEELELYRKQ 163
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|397482786|ref|XP_003812597.1| PREDICTED: high mobility group protein B4 [Pan paniscus]
Length = 177
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 7/103 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 62 ALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
V KA G W +++ EK PYE +A L+++Y +++ Y K+
Sbjct: 122 Q-VAKATGKMWSTVTDLEKHPYEQRAALLRAKYFEELELYRKQ 163
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|57112857|ref|XP_538194.1| PREDICTED: high mobility group protein B3 [Canis lupus familiaris]
gi|338729649|ref|XP_001505130.3| PREDICTED: high mobility group protein B3-like isoform 1 [Equus
caballus]
Length = 201
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|417396975|gb|JAA45521.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 200
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|395545985|ref|XP_003774876.1| PREDICTED: high mobility group protein B3-like [Sarcophilus
harrisii]
Length = 201
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|301778413|ref|XP_002924621.1| PREDICTED: high mobility group protein B3-like [Ailuropoda
melanoleuca]
Length = 201
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|149410917|ref|XP_001509199.1| PREDICTED: high mobility group protein B3-like isoform 1
[Ornithorhynchus anatinus]
gi|345306624|ref|XP_003428488.1| PREDICTED: high mobility group protein B3-like isoform 2
[Ornithorhynchus anatinus]
Length = 201
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|410989557|ref|XP_004001438.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Felis catus]
Length = 201
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|290560936|ref|NP_001166812.1| high mobility group box 3 [Rattus norvegicus]
gi|392354295|ref|XP_003751731.1| PREDICTED: high mobility group protein B3-like isoform 2 [Rattus
norvegicus]
gi|149027076|gb|EDL82825.1| rCG56793 [Rattus norvegicus]
gi|165971283|gb|AAI58740.1| Hmgb3 protein [Rattus norvegicus]
Length = 200
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IGDVAKKLGEMWNNLSDSEKQPYMTKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|281338637|gb|EFB14221.1| hypothetical protein PANDA_014002 [Ailuropoda melanoleuca]
Length = 168
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|291410190|ref|XP_002721383.1| PREDICTED: high-mobility group box 3 [Oryctolagus cuniculus]
Length = 215
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 104 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYITKAA 162
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 163 KLKEKYEKDVADYKSK 178
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 29 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 88
Query: 119 KMNAY 123
+M Y
Sbjct: 89 EMKDY 93
>gi|348551110|ref|XP_003461373.1| PREDICTED: high mobility group protein B3-like [Cavia porcellus]
Length = 202
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|354495940|ref|XP_003510086.1| PREDICTED: high mobility group protein B3-like [Cricetulus griseus]
gi|344249016|gb|EGW05120.1| High mobility group protein B3 [Cricetulus griseus]
Length = 200
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|426258242|ref|XP_004022724.1| PREDICTED: high mobility group protein B3 [Ovis aries]
Length = 248
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 160 DPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IGDVAKKLGEMWNNLSDSEKQPYINKAA 218
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 219 KLKEKYEKDVADYKSK 234
>gi|81673590|gb|AAI09794.1| High-mobility group box 3 [Bos taurus]
gi|296471156|tpg|DAA13271.1| TPA: high mobility group protein B3 isoform 1 [Bos taurus]
Length = 236
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 125 DPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IGDVAKKLGEMWNNLSDSEKQPYINKAA 183
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 184 KLKEKYEKDVADYKSK 199
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 50 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 109
Query: 119 KMNAY 123
+M Y
Sbjct: 110 EMKDY 114
>gi|355694844|gb|AER99804.1| high-mobility group box 3 [Mustela putorius furo]
Length = 197
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S EK PY +KA
Sbjct: 91 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDGEKQPYNNKAA 149
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 150 KLKEKYEKDVADYKSK 165
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 16 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 75
Query: 119 KMNAY 123
+M Y
Sbjct: 76 EMKDY 80
>gi|403293162|ref|XP_003937591.1| PREDICTED: high mobility group protein B4 [Saimiri boliviensis
boliviensis]
Length = 254
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 7/103 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 125 ALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 184
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
V KA G W + + EK PYE +A L+++Y +++ Y K+
Sbjct: 185 Q-VAKATGKMWSATTDLEKQPYEQRAALLRAKYFEELELYRKQ 226
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 71 KPKANVSSYIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 130
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 131 KARYQEEMMNY 141
>gi|56384901|gb|AAV85889.1| high mobility group 1 protein [Pelodiscus sinensis]
Length = 202
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDGEKQPYNNKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|449269345|gb|EMC80131.1| High mobility group protein B3 [Columba livia]
Length = 202
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDGEKQPYNNKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP + + K +WK+MS EKA ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEIPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|547652|sp|P36194.2|HMGB1_CHICK RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|391636|dbj|BAA03260.1| HMG-1 [Gallus gallus]
Length = 201
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S EK PY +KA
Sbjct: 88 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDGEKQPYNNKAA 146
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 147 KLKEKYEKDVADYKSK 162
>gi|392878936|gb|AFM88300.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F R ++E P ++ + + K G KW +M EK PYE +A+
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLS-IGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 111 KLKSEYGKKMNAYNKKQVTNLVPFFN 136
KLK +Y K + AY K + V F
Sbjct: 166 KLKEKYKKDVAAYRAKTKPDSVENFT 191
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPN-VTAVSAVGKAAGGKWKSMSPAEKAP 104
+K +DP KP+ +++ +F++ R+ KK++P V + + K +WK+MS EK+
Sbjct: 15 RKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKSK 74
Query: 105 YESKAEKLKSEYGKKMNAY 123
+E +++ K Y +M Y
Sbjct: 75 FEELSKEDKKRYESEMKDY 93
>gi|440910877|gb|ELR60625.1| High mobility group protein B3 [Bos grunniens mutus]
Length = 236
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 125 DPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IGDVAKKLGEMWNNLSDSEKQPYINKAA 183
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 184 KLKEKYEKDVADYKSK 199
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 50 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 109
Query: 119 KMNAY 123
+M Y
Sbjct: 110 EMKDY 114
>gi|291399740|ref|XP_002716281.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 243
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQVTNLV 132
E KA KLK +Y K AY K + V
Sbjct: 145 ERKAAKLKGKYEKDTAAYRAKGKLDAV 171
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K D KP+ S++ F++ R+ KK +P+ + S K +WK+MS EK +E
Sbjct: 3 KGDRKKPRGKMSSYAFFVQTCREEHKKRHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|45360483|ref|NP_988904.1| high mobility group box 2 [Xenopus (Silurana) tropicalis]
gi|38181929|gb|AAH61601.1| high-mobility group box 2 [Xenopus (Silurana) tropicalis]
Length = 212
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R K E+P ++ + K G W +P +K PYE KA
Sbjct: 92 DPNAPKRPPSAFFLFCSEHRPQIKSESPGLS-IGDTAKKLGEMWSEQTPKDKLPYEQKAA 150
Query: 111 KLKSEYGKKMNAYNKKQVTNL 131
KLK +Y K + AY K +++
Sbjct: 151 KLKEKYEKDVAAYKAKGKSDV 171
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEE 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 MAKNDKVRYEREMKTY 78
>gi|224098124|ref|XP_002198052.1| PREDICTED: high mobility group protein B3 isoform 1 [Taeniopygia
guttata]
gi|326924638|ref|XP_003208532.1| PREDICTED: high mobility group protein B3-like [Meleagris
gallopavo]
gi|449498655|ref|XP_004177286.1| PREDICTED: high mobility group protein B3 isoform 2 [Taeniopygia
guttata]
Length = 202
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDGEKQPYNNKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EKA ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|293333310|ref|NP_001168929.1| uncharacterized protein LOC100382741 [Zea mays]
gi|223973791|gb|ACN31083.1| unknown [Zea mays]
Length = 204
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 41/56 (73%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KPKRPPSAFFVF+ EFR+ ++ +P +V+ V KAAG KW++MS EK PY +A
Sbjct: 32 KPKRPPSAFFVFMSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQA 87
>gi|345780695|ref|XP_851529.2| PREDICTED: high mobility group protein B4 [Canis lupus familiaris]
Length = 193
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 63/106 (59%), Gaps = 7/106 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GK++K+ K+DP P+RPPS+F +F ++ K+ENP + V
Sbjct: 64 ALAKLDKARYQEEMMNYVGKKKKRRKRDPQAPRRPPSSFLIFCQDHYAQLKRENPTWSVV 123
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQVT 129
V KA+G W S AEK PYE +A L++ Y +++ Y +++ T
Sbjct: 124 Q-VAKASGRMWSVTSGAEKQPYEQRAAVLRARYQEELEVYRQQRNT 168
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
+PK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 10 RPKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|387914724|gb|AFK10971.1| high mobility group box 1 [Callorhinchus milii]
Length = 226
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F R ++E P ++ + + K G KW +M EK PYE +A+
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLS-IGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 111 KLKSEYGKKMNAYNKKQVTNLVPFFN 136
KLK +Y K + AY K + V F
Sbjct: 166 KLKEKYKKDVAAYRAKTKPDSVKNFT 191
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPN-VTAVSAVGKAAGGKWKSMSPAEKAP 104
+K +DP KP+ ++ +F++ R+ KK++P V + + K +WK+MS EK+
Sbjct: 15 RKMARDPKKPRGRLTSHALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKSK 74
Query: 105 YESKAEKLKSEYGKKMNAY 123
+E +++ K Y +M Y
Sbjct: 75 FEELSKEDKKRYESEMKDY 93
>gi|392879586|gb|AFM88625.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F R ++E P ++ + + K G KW +M EK PYE +A+
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLS-IGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 111 KLKSEYGKKMNAYNKKQVTNLVPFFN 136
KLK +Y K + AY K + V F
Sbjct: 166 KLKEKYKKDVAAYRAKTKPDSVKNFT 191
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPN-VTAVSAVGKAAGGKWKSMSPAEKAP 104
+K +DP KP+ +++ +F++ R+ KK++P V + + K +WK+MS EK+
Sbjct: 15 RKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKSK 74
Query: 105 YESKAEKLKSEYGKKMNAY 123
+E +++ K Y +M Y
Sbjct: 75 FEELSKEDKKRYESEMKDY 93
>gi|392876654|gb|AFM87159.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F R ++E P ++ + + K G KW +M EK PYE +A+
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLS-IGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 111 KLKSEYGKKMNAYNKKQVTNLVPFFN 136
KLK +Y K + AY K + V F
Sbjct: 166 KLKEKYKKDVAAYRAKTKPDSVKNFT 191
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPN-VTAVSAVGKAAGGKWKSMSPAEKAP 104
+K +DP KP+ +++ +F++ R+ KK++P V + + K WK+MS EK+
Sbjct: 15 RKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSEGWKTMSAKEKSK 74
Query: 105 YESKAEKLKSEYGKKMNAY 123
+E +++ K Y +M Y
Sbjct: 75 FEELSKEDKKRYESEMKDY 93
>gi|387016392|gb|AFJ50315.1| High mobility group protein B1 [Crotalus adamanteus]
Length = 215
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + S +K P+
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTSSEDKQPF 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAGKLKEKYEKDIAAYRAK 165
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A K Y ++M Y
Sbjct: 63 MARADKVRYEREMKTY 78
>gi|148694630|gb|EDL26577.1| mCG10155, isoform CRA_d [Mus musculus]
Length = 220
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S EK PY +KA
Sbjct: 109 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDNEKQPYVTKAA 167
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 168 KLKEKYEKDVADYKSK 183
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 34 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYDR 93
Query: 119 KMNAY 123
+M Y
Sbjct: 94 EMKDY 98
>gi|350588033|ref|XP_003482539.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
gi|350588037|ref|XP_003482541.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 196
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|311277128|ref|XP_003135516.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 202
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|164450473|ref|NP_001106728.1| high mobility group protein B3 isoform 2 [Bos taurus]
gi|146324910|sp|Q32L31.2|HMGB3_BOVIN RecName: Full=High mobility group protein B3
gi|296471157|tpg|DAA13272.1| TPA: high mobility group protein B3 isoform 2 [Bos taurus]
gi|399227521|gb|AFP36466.1| HMGB3 transcript variant 1/2 [Bos taurus]
gi|399227522|gb|AFP36467.1| HMGB3 transcript variant 3 [Bos taurus]
Length = 200
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|392884154|gb|AFM90909.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F R ++E P ++ + + K G KW +M EK PYE +A+
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLS-IGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 111 KLKSEYGKKMNAYNKKQVTNLVPFFN 136
KLK +Y K + AY K + V F
Sbjct: 166 KLKEKYKKDVAAYRAKTKPDSVKNFT 191
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPN-VTAVSAVGKAAGGKWKSMSPAEKAP 104
+K +DP KP+ +++ +F++ R+ KK++P V + + K +W++MS EK+
Sbjct: 15 RKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWETMSAKEKSK 74
Query: 105 YESKAEKLKSEYGKKMNAY 123
+E +++ K Y +M Y
Sbjct: 75 FEELSKEDKKRYESEMKDY 93
>gi|392876858|gb|AFM87261.1| high mobility group protein [Callorhinchus milii]
gi|392878442|gb|AFM88053.1| high mobility group protein [Callorhinchus milii]
gi|392880194|gb|AFM88929.1| high mobility group protein [Callorhinchus milii]
gi|392881188|gb|AFM89426.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F R ++E P ++ + + K G KW +M EK PYE +A+
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLS-IGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 111 KLKSEYGKKMNAYNKKQVTNLVPFFN 136
KLK +Y K + AY K + V F
Sbjct: 166 KLKEKYKKDVAAYRAKTKPDSVKNFT 191
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPN-VTAVSAVGKAAGGKWKSMSPAEKAP 104
+K +DP KP+ +++ +F++ R+ KK++P V + + K +WK+MS EK+
Sbjct: 15 RKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKSK 74
Query: 105 YESKAEKLKSEYGKKMNAY 123
+E +++ K Y +M Y
Sbjct: 75 FEELSKEDKKRYESEMKDY 93
>gi|148234528|ref|NP_001080836.1| high mobility group box 1 [Xenopus laevis]
gi|32450384|gb|AAH54148.1| Hmgb1-prov protein [Xenopus laevis]
Length = 211
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K E+P T + + K G W + + +K P+
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGST-IGDIAKKLGEMWNNTATDDKLPF 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 ERKAAKLKEKYEKDVAAYRAK 165
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 MAKADKVRYEREMKTY 78
>gi|359062996|ref|XP_003585778.1| PREDICTED: high mobility group protein B3-like, partial [Bos
taurus]
Length = 186
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYSFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEIAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|367020358|ref|XP_003659464.1| hypothetical protein MYCTH_2296547 [Myceliophthora thermophila ATCC
42464]
gi|347006731|gb|AEO54219.1| hypothetical protein MYCTH_2296547 [Myceliophthora thermophila ATCC
42464]
Length = 101
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 40 RQGKREKK-AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
R GK EKK +KKDPN PKR SA+ F E R+ ++ENP V+ VGK G +WK++S
Sbjct: 8 RSGKAEKKRSKKDPNAPKRGLSAYMFFANEQRENVREENPGVS-FGQVGKILGERWKALS 66
Query: 99 PAEKAPYESKAEKLKSEYGKKMNAYN 124
++APYE+KA K Y + AYN
Sbjct: 67 DKQRAPYEAKAAADKKRYEDEKQAYN 92
>gi|401885246|gb|EJT49369.1| nonhistone protein 6 [Trichosporon asahii var. asahii CBS 2479]
gi|406694772|gb|EKC98094.1| nonhistone protein 6 [Trichosporon asahii var. asahii CBS 8904]
Length = 108
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+ KKDPNKPKR SA+ F++++R+ K ENP+ +VG+ G KW+ MS +EK PY
Sbjct: 14 KRGKKDPNKPKRALSAYMFFVQDWRERIKSENPDAD-FGSVGRLLGAKWQEMSASEKKPY 72
Query: 106 ESKAEKLKSEYGKKMNAYN 124
E KA+ K K+ Y+
Sbjct: 73 EDKAQADKDRAAKEKAEYD 91
>gi|148694627|gb|EDL26574.1| mCG10155, isoform CRA_b [Mus musculus]
Length = 206
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S EK PY +KA
Sbjct: 95 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDNEKQPYVTKAA 153
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 154 KLKEKYEKDVADYKSK 169
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 20 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYDR 79
Query: 119 KMNAY 123
+M Y
Sbjct: 80 EMKDY 84
>gi|148238271|ref|NP_001081794.1| high mobility group protein-1 [Xenopus laevis]
gi|709959|gb|AAC59859.1| high mobility group protein-1 [Xenopus laevis]
Length = 210
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F +FR K E+P T + + K G W + + +K PY
Sbjct: 85 KKRFKDPNAPKRPPSAFFLFCSDFRPKIKGEHPGST-IGDIAKKLGEMWNNTATDDKLPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E +A KLK +Y K + AY K
Sbjct: 144 ERRAAKLKEKYEKDVAAYRAK 164
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + + K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMS-KEKTKFED 61
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 62 MAKADKVRYEREMKSY 77
>gi|49115548|gb|AAH73449.1| HMG-1 protein [Xenopus laevis]
Length = 210
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F +FR K E+P T + + K G W + + +K PY
Sbjct: 85 KKRFKDPNAPKRPPSAFFLFCSDFRPKIKGEHPGST-IGDIAKKLGEMWNNTATDDKLPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E +A KLK +Y K + AY K
Sbjct: 144 ERRAAKLKEKYEKDVAAYRAK 164
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + + K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMS-KEKTKFED 61
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 62 MAKADKVRYEREMKSY 77
>gi|225703866|gb|ACO07779.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 194
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
++KK KDPN PKRPPSAFF+F +FR K E+P ++ + K G W S + EK
Sbjct: 83 QKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLS-IGDTAKKLGVMWNSSAAEEKK 141
Query: 104 PYESKAEKLKSEYGKKMNAY 123
PYE KA LK +Y K + +Y
Sbjct: 142 PYEKKAATLKEKYDKDIASY 161
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R KK++P + + K +WK MSP EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|221221922|gb|ACM09622.1| High mobility group protein B1 [Salmo salar]
Length = 196
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
++KK KDPN PKRPPSAFF+F +FR K E+P ++ + K G W S + EK
Sbjct: 83 QKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLS-IGDTAKKLGVMWNSSAAEEKK 141
Query: 104 PYESKAEKLKSEYGKKMNAY 123
PYE KA LK +Y K + +Y
Sbjct: 142 PYEKKAATLKEKYDKDIASY 161
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R KK++P + + K +WK MSP EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|221219434|gb|ACM08378.1| High mobility group protein B1 [Salmo salar]
Length = 196
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
++KK KDPN PKRPPSAFF+F +FR K E+P ++ + K G W S + EK
Sbjct: 83 QKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLS-IGDTAKKLGVMWNSSAAEEKK 141
Query: 104 PYESKAEKLKSEYGKKMNAY 123
PYE KA LK +Y K + +Y
Sbjct: 142 PYEKKAATLKEKYDKDIASY 161
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R KK++P + + K +WK MSP EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|74628491|sp|Q7S045.1|NHP6_NEUCR RecName: Full=Non-histone chromosomal protein 6
gi|336464617|gb|EGO52857.1| Non-histone chromosomal protein 6 [Neurospora tetrasperma FGSC
2508]
gi|350296712|gb|EGZ77689.1| Non-histone chromosomal protein 6 [Neurospora tetrasperma FGSC
2509]
Length = 103
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 38 SKRQGKREKK-AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
SK GK EK+ AKKDPN PKR SA+ F E R+ ++ENP V+ VGK G +WK+
Sbjct: 8 SKTTGKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVS-FGQVGKILGERWKA 66
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYN 124
+S ++APYE+KA K Y + AYN
Sbjct: 67 LSDKQRAPYEAKAAADKKRYEDEKQAYN 94
>gi|296200444|ref|XP_002747606.1| PREDICTED: high mobility group protein B1-like isoform 2
[Callithrix jacchus]
Length = 210
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDP+ PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPSAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKASKLKEKYEKDIAAYQAK 165
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP K + S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 MAKADKVRYEREMKTY 78
>gi|253756810|gb|ACT35162.1| HmgB3y, partial [Monodelphis domestica]
Length = 193
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S EK PY +KA
Sbjct: 86 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDNEKQPYNNKAA 144
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 145 KLKEKYEKDVADYKSK 160
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKA 109
DP KPK SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A
Sbjct: 2 DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKNMSGKEKSKFDEMA 61
Query: 110 EKLKSEYGKKMNAY 123
+ K Y ++M Y
Sbjct: 62 KADKLRYDREMKDY 75
>gi|225704132|gb|ACO07912.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 194
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
++KK KDPN PKRPPSAFF+F +FR K E+P ++ + K G W S + EK
Sbjct: 83 QKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLS-IGDTAKKLGVMWNSSAAEEKK 141
Query: 104 PYESKAEKLKSEYGKKMNAY 123
PYE KA LK +Y K + +Y
Sbjct: 142 PYEKKAATLKEKYDKDIASY 161
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R KK++P + + K +WK MSP EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y +M Y
Sbjct: 63 AKQDKVRYEGEMKNY 77
>gi|344299188|ref|XP_003421269.1| PREDICTED: high mobility group protein B3-like [Loxodonta africana]
Length = 200
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDNEKQPYNNKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|254826706|ref|NP_001157151.1| high mobility group protein B3 [Monodelphis domestica]
gi|253756818|gb|ACT35166.1| HmgB3x [Monodelphis domestica]
Length = 201
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDNEKQPYNNKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|164422576|ref|XP_957906.2| hypothetical protein NCU09995 [Neurospora crassa OR74A]
gi|157069727|gb|EAA28670.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 95
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 38 SKRQGKREKK-AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
SK GK EK+ AKKDPN PKR SA+ F E R+ ++ENP V+ VGK G +WK+
Sbjct: 8 SKTTGKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVS-FGQVGKILGERWKA 66
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYN 124
+S ++APYE+KA K Y + AYN
Sbjct: 67 LSDKQRAPYEAKAAADKKRYEDEKQAYN 94
>gi|223942599|gb|ACN25383.1| unknown [Zea mays]
gi|414881085|tpg|DAA58216.1| TPA: hypothetical protein ZEAMMB73_949955 [Zea mays]
Length = 118
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%)
Query: 27 RKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAV 86
+ A A S +KR+ + + K DP PK+PP+AFF F+E+FRK +K+E P+V ++ +
Sbjct: 13 KTVAMAPRPSSTKRKPRPKPAGKGDPRAPKKPPTAFFYFMEDFRKIYKQEKPSVKSMQEI 72
Query: 87 GKAAGGKWKSMS 98
GKA G KW +M+
Sbjct: 73 GKACGEKWNTMT 84
>gi|148682307|gb|EDL14254.1| mCG114640 [Mus musculus]
Length = 200
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDNEKQPYVTKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|302497713|ref|XP_003010856.1| hypothetical protein ARB_02895 [Arthroderma benhamiae CBS 112371]
gi|291174401|gb|EFE30216.1| hypothetical protein ARB_02895 [Arthroderma benhamiae CBS 112371]
Length = 106
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KKDPN PKR SA+ +F E R ++ENPN+T VGK G +WK++S ++ PY
Sbjct: 15 EKKKKDPNAPKRGLSAYMIFANEQRAAVREENPNIT-FGQVGKVLGERWKALSDKQRVPY 73
Query: 106 ESKAEKLKSEYGKKMNAYN 124
E KA K Y + AYN
Sbjct: 74 EEKAATDKQRYEDEKAAYN 92
>gi|6680231|ref|NP_032279.1| high mobility group protein B3 [Mus musculus]
gi|20138160|sp|O54879.3|HMGB3_MOUSE RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|2738989|gb|AAC16925.1| high mobility group protein homolog HMG4 [Mus musculus]
gi|15030059|gb|AAH11276.1| Hmgb3 protein [Mus musculus]
gi|26327985|dbj|BAC27733.1| unnamed protein product [Mus musculus]
gi|54035419|gb|AAH83352.1| High mobility group box 3 [Mus musculus]
gi|74146994|dbj|BAE27437.1| unnamed protein product [Mus musculus]
gi|74186760|dbj|BAE34835.1| unnamed protein product [Mus musculus]
gi|74192972|dbj|BAE34988.1| unnamed protein product [Mus musculus]
gi|74194280|dbj|BAE24671.1| unnamed protein product [Mus musculus]
gi|148694626|gb|EDL26573.1| mCG10155, isoform CRA_a [Mus musculus]
gi|148694628|gb|EDL26575.1| mCG10155, isoform CRA_a [Mus musculus]
gi|187957408|gb|AAI58038.1| High mobility group box 3 [Mus musculus]
Length = 200
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDNEKQPYVTKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|397466921|ref|XP_003805186.1| PREDICTED: high mobility group protein B3 [Pan paniscus]
gi|410057106|ref|XP_001135676.3| PREDICTED: high mobility group protein B3 isoform 1 [Pan
troglodytes]
gi|426397737|ref|XP_004065063.1| PREDICTED: high mobility group protein B3 isoform 2 [Gorilla
gorilla gorilla]
gi|119619804|gb|EAW99398.1| high-mobility group box 3, isoform CRA_b [Homo sapiens]
Length = 220
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W +++ +EK PY +KA
Sbjct: 109 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYITKAA 167
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 168 KLKEKYEKDVADYKSK 183
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 34 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 93
Query: 119 KMNAY 123
+M Y
Sbjct: 94 EMKDY 98
>gi|56788496|gb|AAW29969.1| unknown [Sus scrofa]
gi|56792880|gb|AAW30632.1| unknown [Sus scrofa]
Length = 193
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E A KLK +Y K + AY K
Sbjct: 145 EKXAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|332254661|ref|XP_003276450.1| PREDICTED: high mobility group protein B4 [Nomascus leucogenys]
Length = 189
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 7/104 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AK+D ++ GKR+K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 62 ALAKVDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
V KA G W + + EK PYE +A L+++Y +++ Y K+
Sbjct: 122 Q-VAKATGEMWSTTTDLEKHPYEQRAALLRAKYFEELELYRKQH 164
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R TFK++ PN + +W+S+S EKA YE+ A+
Sbjct: 8 KPKANVSSYVHFLLNYRNTFKEQQPNTYVGFKEFSRKCSEEWRSISKHEKAKYEALAKVD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|67968790|dbj|BAE00752.1| unnamed protein product [Macaca fascicularis]
Length = 191
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ K+DP P+RPPS+F +F ++ K+ENP+ + V
Sbjct: 64 ALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPSWSVV 123
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
V KA G W + + EK PYE +A L+++Y +++ Y K+Q
Sbjct: 124 Q-VAKATGKMWSATADLEKHPYEQRAALLRAKYFEELELYRKQQ 166
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 10 KPKANVSSYIHFLLNYRNEFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|57232750|ref|NP_660206.2| high mobility group protein B4 [Homo sapiens]
gi|387912835|sp|Q8WW32.2|HMGB4_HUMAN RecName: Full=High mobility group protein B4
gi|189065201|dbj|BAG34924.1| unnamed protein product [Homo sapiens]
gi|208968483|dbj|BAG74080.1| high-mobility group box 4 [synthetic construct]
Length = 186
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 62/103 (60%), Gaps = 7/103 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ K+DP +P+RPPS+F +F ++ K+ENPN + V
Sbjct: 62 ALAKLDKARYQEEMMNYVGKRKKRRKRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
V KA G W + + EK PYE + L+++Y +++ Y K+
Sbjct: 122 Q-VAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYRKQ 163
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|355705241|gb|EHH31166.1| hypothetical protein EGK_21042 [Macaca mulatta]
Length = 200
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W +++ +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKLKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|410256410|gb|JAA16172.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W +++ +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|395857899|ref|XP_003801318.1| PREDICTED: high mobility group protein B4 [Otolemur garnettii]
Length = 187
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 63/103 (61%), Gaps = 7/103 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ KKDP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 62 ALAKLDKARYQEEMMHYDGKRKKRRKKDPQAPRRPPSSFLLFCKDHYAQLKRENPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
V KA+G W + AEK PYE +A L+++Y +++ Y ++
Sbjct: 122 Q-VAKASGKMWSLSTNAEKQPYEERAALLRAKYQEELQIYRRQ 163
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
+PK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 8 RPKVNVSSYIHFLLNYRNKFKEQQPNTYVGFKDFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 113 KSEYGKKMNAYN 124
K+ Y ++M Y+
Sbjct: 68 KARYQEEMMHYD 79
>gi|52345682|ref|NP_001004888.1| high mobility group box 3 [Xenopus (Silurana) tropicalis]
gi|49522962|gb|AAH75290.1| MGC88931 protein [Xenopus (Silurana) tropicalis]
gi|89267024|emb|CAJ81774.1| high-mobility group box 3 [Xenopus (Silurana) tropicalis]
Length = 202
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W +++ EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLNDGEKQPYNNKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|395754558|ref|XP_002832281.2| PREDICTED: high mobility group protein B3 isoform 2 [Pongo abelii]
Length = 199
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W +++ +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|403305854|ref|XP_003943467.1| PREDICTED: high mobility group protein B3 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W +++ +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSEFDEMAKADKVCYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|410219302|gb|JAA06870.1| high mobility group box 3 [Pan troglodytes]
Length = 199
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W +++ +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|296236643|ref|XP_002763412.1| PREDICTED: high mobility group protein B3-like [Callithrix jacchus]
Length = 203
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W +++ +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|167773205|gb|ABZ92037.1| high-mobility group box 3 [synthetic construct]
Length = 198
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W +++ +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|109132602|ref|XP_001091672.1| PREDICTED: high mobility group protein B3-like isoform 3 [Macaca
mulatta]
gi|109132606|ref|XP_001091441.1| PREDICTED: high mobility group protein B3-like isoform 1 [Macaca
mulatta]
gi|402911729|ref|XP_003918461.1| PREDICTED: high mobility group protein B3 isoform 1 [Papio anubis]
gi|402911731|ref|XP_003918462.1| PREDICTED: high mobility group protein B3 isoform 2 [Papio anubis]
Length = 201
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W +++ +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|71143137|ref|NP_005333.2| high mobility group protein B3 [Homo sapiens]
gi|426397735|ref|XP_004065062.1| PREDICTED: high mobility group protein B3 isoform 1 [Gorilla
gorilla gorilla]
gi|426397739|ref|XP_004065064.1| PREDICTED: high mobility group protein B3 isoform 3 [Gorilla
gorilla gorilla]
gi|85701353|sp|O15347.4|HMGB3_HUMAN RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|47124341|gb|AAH70482.1| HMGB3 protein [Homo sapiens]
gi|117645316|emb|CAL38124.1| hypothetical protein [synthetic construct]
gi|117646384|emb|CAL38659.1| hypothetical protein [synthetic construct]
gi|119619803|gb|EAW99397.1| high-mobility group box 3, isoform CRA_a [Homo sapiens]
gi|410351655|gb|JAA42431.1| high mobility group box 3 [Pan troglodytes]
gi|410351657|gb|JAA42432.1| high mobility group box 3 [Pan troglodytes]
Length = 200
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W +++ +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|2285963|emb|CAA71143.1| high mobility group protein 2a [Homo sapiens]
Length = 200
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W +++ +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|67484144|ref|XP_657292.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474548|gb|EAL51913.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 114
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN+PKRPP+ +F++L E R + K+E+P++ + + K A +WK++ EK Y++KA+
Sbjct: 26 PNRPKRPPTPYFIYLNEHRASIKEEHPDIR-FTEISKVASEQWKALGEEEKKEYQTKADA 84
Query: 112 LKSEYGKKMNAYNKK 126
K +Y K M YN K
Sbjct: 85 AKEQYKKDMEKYNNK 99
>gi|449500530|ref|XP_002187513.2| PREDICTED: high mobility group protein B2 [Taeniopygia guttata]
Length = 145
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA
Sbjct: 40 DPNAPKRPPSAFFLFCSEHRPKIKNEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAA 98
Query: 111 KLKSEYGKKMNAYNKKQVTN 130
KLK +Y K + AY K ++
Sbjct: 99 KLKEKYEKDIAAYRAKSKSD 118
>gi|334323271|ref|XP_003340370.1| PREDICTED: high mobility group protein B1-like [Monodelphis
domestica]
Length = 216
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA LK +Y K + AY K
Sbjct: 145 EKKAAILKEKYEKDIAAYRTK 165
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK ++
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFQ 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 DMAKADKVHYEREMKTY 78
>gi|432895946|ref|XP_004076239.1| PREDICTED: high mobility group-T protein-like [Oryzias latipes]
Length = 206
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PKRPPSAFF+F EFR K E+P +T + V K G W S S +K PYE KA
Sbjct: 89 KDPNAPKRPPSAFFIFCSEFRPKVKGESPGLT-IGDVAKRLGEMWNSTSAEDKQPYEKKA 147
Query: 110 EKLKSEYGKKMNAYNKKQVT 129
KLK +YGK + AY K T
Sbjct: 148 AKLKEKYGKDIAAYRAKGKT 167
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P+ + + K +WK+MS EK +E
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A + K Y ++M +Y
Sbjct: 63 ARQDKVRYDREMMSY 77
>gi|291415754|ref|XP_002724114.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA
Sbjct: 115 DPNAPKRPPSAFFLFCSEHRPEIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAA 173
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + AY K
Sbjct: 174 KLKEKYEKDIAAYCDK 189
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E+
Sbjct: 27 KGDPNKPRDKMSSYAFFVQMCREEHKKKHPDSSINFAEFSKKCSERWKTMSAKEKSKFEN 86
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 87 MAKSDKARYDREMKNY 102
>gi|237845111|ref|XP_002371853.1| high mobility group protein [Toxoplasma gondii ME49]
gi|211969517|gb|EEB04713.1| high mobility group protein [Toxoplasma gondii ME49]
gi|221480801|gb|EEE19228.1| high mobility group protein, putative [Toxoplasma gondii GT1]
gi|221501467|gb|EEE27242.1| high mobility group protein, putative [Toxoplasma gondii VEG]
Length = 302
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 39 KRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSM 97
K+ ++ KAKKDPN PKRP SAF F ++ R+ ++NP + + ++ VGK G W +
Sbjct: 212 KKTIVKKTKAKKDPNAPKRPLSAFIFFSKDKREEIIRKNPELKSKLAEVGKMVGEAWGKL 271
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNK 125
S A+K PYESKA K+ Y ++M AY K
Sbjct: 272 SDAQKKPYESKAVADKARYEREMIAYKK 299
>gi|401626897|gb|EJS44815.1| nhp6bp [Saccharomyces arboricola H-6]
Length = 99
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR SA+ F E R + ENP+VT VG+ G +WK+++ EK
Sbjct: 15 KRTTRRKKDPNAPKRGLSAYMFFANETRDIVRSENPDVT-FGQVGRILGERWKALTAEEK 73
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PYESKA+ K Y + YN
Sbjct: 74 VPYESKAQADKKRYESEKELYN 95
>gi|351715334|gb|EHB18253.1| High mobility group protein B3, partial [Heterocephalus glaber]
Length = 151
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPP FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 40 DPNAPKRPPPGFFLFFSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYITKAA 98
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 99 KLKEKYEKDVADYKSK 114
>gi|156837652|ref|XP_001642846.1| hypothetical protein Kpol_376p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156113421|gb|EDO14988.1| hypothetical protein Kpol_376p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 93
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR SA+ F E R + ENP+V+ VG+ G KWK+++P +K
Sbjct: 9 KRTTRRKKDPNAPKRALSAYMFFANETRDIVRAENPDVS-FGQVGRILGEKWKALTPEDK 67
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
P+E+KAE K Y + YN
Sbjct: 68 VPFEAKAEADKKRYESEKELYN 89
>gi|297798364|ref|XP_002867066.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312902|gb|EFH43325.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 125
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 69/108 (63%), Gaps = 5/108 (4%)
Query: 17 LKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKE 76
+K N +V R D K +G + K KDPNKPK+PPS FFVFL++FR+ F
Sbjct: 1 MKDNQTEVESRST-----DDRLKVRGNKGGKKTKDPNKPKKPPSPFFVFLDDFRREFNLA 55
Query: 77 NPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYN 124
NP+ +V++VGKAAG KWKSM+ +KAP+ +KA+ K+EY M YN
Sbjct: 56 NPDNKSVASVGKAAGKKWKSMTEEDKAPFVAKAKSKKTEYAATMQQYN 103
>gi|349802605|gb|AEQ16775.1| putative high mobility group box 3 [Pipa carvalhoi]
Length = 149
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W +++ EK PY +KA
Sbjct: 64 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLNEGEKQPYNNKAA 122
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 123 KLKEKYEKDVADYKSK 138
>gi|358410870|ref|XP_003581858.1| PREDICTED: high mobility group protein B3-like [Bos taurus]
Length = 197
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KL +Y K + Y K
Sbjct: 148 KLXEKYEKDVADYKSK 163
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYSFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEIAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|18088957|gb|AAH21180.1| High-mobility group box 4 [Homo sapiens]
gi|312150396|gb|ADQ31710.1| high-mobility group box 4 [synthetic construct]
Length = 186
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 7/103 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 62 ALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
V KA G W + + EK PYE + L+++Y +++ Y K+
Sbjct: 122 Q-VAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYRKQ 163
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ P+ + KW+S+S EKA YE+ A+
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPSTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|310793467|gb|EFQ28928.1| HMG box protein [Glomerella graminicola M1.001]
Length = 103
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+AKKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK+++ ++APY
Sbjct: 17 KRAKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKILGERWKALNDKQRAPY 75
Query: 106 ESKAEKLKSEYGKKMNAYNKKQ 127
E+KA K Y + AYN +Q
Sbjct: 76 EAKAATDKKRYEDEKQAYNAEQ 97
>gi|426328852|ref|XP_004065350.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B4
[Gorilla gorilla gorilla]
Length = 186
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 7/103 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 62 ALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
V KA G W + + EK PYE + L+++Y +++ Y K+
Sbjct: 122 Q-VAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYRKQ 163
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|116206850|ref|XP_001229234.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183315|gb|EAQ90783.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 96
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 40 RQGKREKKA--KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
R GK EKK KKDPN PKR SA+ F E R ++ENP V+ VGK G +WK++
Sbjct: 8 RSGKAEKKTRQKKDPNAPKRGLSAYMFFANEQRDNVREENPGVS-FGQVGKILGERWKAL 66
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYN 124
S ++APYE+KA K Y + AYN
Sbjct: 67 SDKQRAPYEAKAAADKKRYEDEKQAYN 93
>gi|195618458|gb|ACG31059.1| HMG1/2-like protein [Zea mays]
gi|195640852|gb|ACG39894.1| HMG1/2-like protein [Zea mays]
gi|223975443|gb|ACN31909.1| unknown [Zea mays]
gi|413925109|gb|AFW65041.1| HMG type nucleosome/chromatin assembly factor DNucleasome/chromatin
assembly factor D protein NFD106 [Zea mays]
Length = 212
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
K KR P+AFF+F+++FRK FK +P+ +V+ V K G +WKSM+ EK PY KA +LK
Sbjct: 91 KRKRSPTAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERWKSMTDEEKKPYIEKAAELK 150
Query: 114 SE 115
+E
Sbjct: 151 AE 152
>gi|110808604|gb|ABB22048.1| HMBG4 [Homo sapiens]
gi|119627858|gb|EAX07453.1| high-mobility group box 4 [Homo sapiens]
Length = 186
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 7/103 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ K+DP P+RPPS+F +F ++ K+ENPN + V
Sbjct: 62 ALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
V KA G W + + EK PYE + L+++Y +++ Y K+
Sbjct: 122 Q-VAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYRKQ 163
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|79324303|ref|NP_001031480.1| high mobility group (HMG1/2) domain-containing protein [Arabidopsis
thaliana]
gi|330253882|gb|AEC08976.1| high mobility group (HMG1/2) domain-containing protein [Arabidopsis
thaliana]
Length = 152
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAV-SAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
PK+P +AFF FL++FRK +++ENP+V ++ +GK G KWK+M+ EK Y A + +
Sbjct: 63 PKKPATAFFFFLDDFRKQYQEENPDVKSMREVIGKTCGEKWKTMTYEEKVKYYDIATEKR 122
Query: 114 SEYGKKMNAYNKK 126
E+ + M Y K+
Sbjct: 123 EEFHRAMTEYTKR 135
>gi|356506416|ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
Length = 614
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 35 DSGSKRQ--GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGG 92
DSG +++ K+E +KDPN PKR S F F + R+ KK NP + + + VG+ G
Sbjct: 508 DSGDEKEKPAKKESNKEKDPNAPKRAMSGFMFFSKLERENLKKTNPGI-SFTDVGRVLGE 566
Query: 93 KWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQVTNL 131
KWK +S EK PYE+KA + K Y +++ Y Q N+
Sbjct: 567 KWKKLSAEEKEPYEAKAREDKKRYMDEISGYKNPQPMNI 605
>gi|349576469|dbj|GAA21640.1| K7_Nhp6bp [Saccharomyces cerevisiae Kyokai no. 7]
Length = 99
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR SA+ F E R + ENP+VT VG+ G KWK+++ EK
Sbjct: 15 KRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVT-FGQVGRILGEKWKALTAEEK 73
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PYESKA+ K Y + YN
Sbjct: 74 QPYESKAQADKKRYESEKELYN 95
>gi|410955200|ref|XP_003984245.1| PREDICTED: high mobility group protein B2-like [Felis catus]
Length = 329
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P + + + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-PIGDIAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +YGK + AY K
Sbjct: 152 KEKYGKDIAAYRTK 165
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP+KP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 2 GKGDPSKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSEKEKSKFE 61
Query: 107 SKAEKLKSEYGKKM 120
A+ K+ Y ++M
Sbjct: 62 DMAKSDKARYDREM 75
>gi|344245608|gb|EGW01712.1| High mobility group protein B1 [Cricetulus griseus]
Length = 162
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+ K E P ++ + K G W S + +K PY
Sbjct: 35 KKKFKDPNAPKRPPSAFFLFCSEYHPKIKGERPGLS-IGDAAKKLGETWNSTAAEDKQPY 93
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E+KA KLK +Y K + Y K
Sbjct: 94 ETKAAKLKEQYEKDIADYRAK 114
>gi|326918606|ref|XP_003205579.1| PREDICTED: high mobility group protein B2-like [Meleagris
gallopavo]
Length = 246
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R K ++P ++ + K G W S +K PYE KA
Sbjct: 129 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAA 187
Query: 111 KLKSEYGKKMNAYNKKQVTN 130
KLK +Y K + AY K ++
Sbjct: 188 KLKEKYEKDIAAYRAKSKSD 207
>gi|355762621|gb|EHH62030.1| hypothetical protein EGM_20207 [Macaca fascicularis]
Length = 201
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W +++ +EK PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVPKKLGEMWNNLNDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|205539816|sp|P0C6E5.1|HG3BL_HUMAN RecName: Full=Putative high mobility group protein B3-like protein
Length = 187
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 28 KAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVG 87
KA D K G + KKDPN PKRPPS FF+F EF K NP + + V
Sbjct: 65 KADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIP-IGDVA 123
Query: 88 KAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
K G WK+++ +EK PY ++A KLK +Y K + Y K
Sbjct: 124 KKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSK 162
>gi|366988547|ref|XP_003674040.1| hypothetical protein NCAS_0A11010 [Naumovozyma castellii CBS 4309]
gi|342299903|emb|CCC67659.1| hypothetical protein NCAS_0A11010 [Naumovozyma castellii CBS 4309]
Length = 101
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
+R ++ KKDPN PKR SA+ F E R K ENPN+T VGK G KWK+++ EK
Sbjct: 8 RRTQRRKKDPNAPKRGLSAYMFFANENRDIVKAENPNIT-FGQVGKVLGEKWKALTAEEK 66
Query: 103 APYESKAEKLKSEYGKKMNAYNKKQV 128
PYE+KA+ K Y + Y QV
Sbjct: 67 EPYEAKAKADKKRYESEKELYMATQV 92
>gi|168056739|ref|XP_001780376.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668218|gb|EDQ54830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 207
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 45/76 (59%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRP S F VF+E FRKT+K NP V+A KA G KWK M+ E+APY AE
Sbjct: 107 DPNAPKRPASGFLVFMESFRKTYKDANPESKGVAAAAKAGGEKWKQMTEEERAPYNKDAE 166
Query: 111 KLKSEYGKKMNAYNKK 126
K Y + M Y K
Sbjct: 167 ARKLNYEQAMTNYKNK 182
>gi|162462896|ref|NP_001105076.1| nucleosome/chromatin assembly factor D [Zea mays]
gi|17017396|gb|AAL33652.1|AF440223_1 HMG type nucleosome/chromatin assembly factor D [Zea mays]
gi|22135475|gb|AAM93218.1|AF527617_1 nucleasome/chromatin assembly factor D protein NFD106 [Zea mays]
Length = 154
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
K KR P+AFF+F+++FRK FK +P+ +V+ V K G +WKSM+ EK PY KA +LK
Sbjct: 33 KRKRSPTAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERWKSMTDEEKKPYIEKAAELK 92
Query: 114 SE 115
+E
Sbjct: 93 AE 94
>gi|395844161|ref|XP_003794831.1| PREDICTED: uncharacterized protein LOC100953571 [Otolemur
garnettii]
Length = 357
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PK PPS FF+F EFR K NP ++ + V K G W S+S +EK PY +K
Sbjct: 253 KKDPNAPKTPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNSLSDSEKQPYITK 311
Query: 109 AEKLKSEYGKKMNAYNKK 126
A +LK + K + Y K
Sbjct: 312 AAQLKEKDEKDVADYKSK 329
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGK 93
D G + + K AK+DP KPK A+ F++ R+ KK+NP V ++ K +
Sbjct: 156 DRGPEGENNSVKIAKRDPKKPKGKMPAYAFFVQTCREEHKKKNPEVPVNLAEFSKKCSER 215
Query: 94 WKSMSPAEKA 103
WK+ S EK+
Sbjct: 216 WKATSGKEKS 225
>gi|358391632|gb|EHK41036.1| hypothetical protein TRIATDRAFT_259074 [Trichoderma atroviride IMI
206040]
Length = 101
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+AKKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK+++ ++APY
Sbjct: 16 KRAKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKLLGERWKALNDKQRAPY 74
Query: 106 ESKAEKLKSEYGKKMNAYNKKQ 127
E+KA K Y + AYN Q
Sbjct: 75 EAKAAADKKRYEDEKQAYNADQ 96
>gi|367012149|ref|XP_003680575.1| hypothetical protein TDEL_0C04750 [Torulaspora delbrueckii]
gi|359748234|emb|CCE91364.1| hypothetical protein TDEL_0C04750 [Torulaspora delbrueckii]
Length = 93
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R + ENP+VT VG+ G +WK+++P EK PYESKAE
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDVT-FGQVGRLLGERWKALTPDEKTPYESKAE 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|47124491|gb|AAH70148.1| High-mobility group box 4 [Homo sapiens]
Length = 112
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR+K+ K+DP P+RPPS+F +F ++ K+ENPN + V V KA G W + + E
Sbjct: 6 GKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVVQ-VAKATGKMWSTATDLE 64
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKK 126
K PYE + L+++Y +++ Y K+
Sbjct: 65 KHPYEQRVALLRAKYFEELELYRKQ 89
>gi|1870104|emb|CAA85042.1| NHP6B [Saccharomyces cerevisiae]
Length = 99
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR SA+ F E R + ENP+VT VG+ G +WK+++ EK
Sbjct: 15 KRTTRRKKDPNAPKRRLSAYMFFANENRDIVRSENPDVT-FGQVGRILGERWKALTAEEK 73
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PYESKA+ K Y + YN
Sbjct: 74 QPYESKAQADKKRYESEKELYN 95
>gi|242080163|ref|XP_002444850.1| hypothetical protein SORBIDRAFT_07g000230 [Sorghum bicolor]
gi|241941200|gb|EES14345.1| hypothetical protein SORBIDRAFT_07g000230 [Sorghum bicolor]
Length = 221
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLK 113
K KR P+AFF+F+++FRK FK +P+ +V+ V K G KWKSM+ EK PY KA +LK
Sbjct: 96 KRKRSPTAFFLFMDDFRKEFKAAHPDNKSVATVAKEGGEKWKSMTDEEKKPYVEKAAELK 155
Query: 114 SE 115
++
Sbjct: 156 AQ 157
>gi|339046261|ref|NP_009647.2| Nhp6bp [Saccharomyces cerevisiae S288c]
gi|341942236|sp|P11633.3|NHP6B_YEAST RecName: Full=Non-histone chromosomal protein 6B
gi|4036|emb|CAA33378.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45271022|gb|AAS56892.1| YBR089C-A [Saccharomyces cerevisiae]
gi|151946484|gb|EDN64706.1| nonhistone chromosomal protein [Saccharomyces cerevisiae YJM789]
gi|190408749|gb|EDV12014.1| 11 kDa nonhistone chromosomal protein [Saccharomyces cerevisiae
RM11-1a]
gi|256274037|gb|EEU08951.1| Nhp6bp [Saccharomyces cerevisiae JAY291]
gi|290878106|emb|CBK39165.1| Nhp6bp [Saccharomyces cerevisiae EC1118]
gi|333454471|tpg|DAA07210.2| TPA: Nhp6bp [Saccharomyces cerevisiae S288c]
Length = 99
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR SA+ F E R + ENP+VT VG+ G +WK+++ EK
Sbjct: 15 KRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVT-FGQVGRILGERWKALTAEEK 73
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PYESKA+ K Y + YN
Sbjct: 74 QPYESKAQADKKRYESEKELYN 95
>gi|109001746|ref|XP_001107984.1| PREDICTED: high mobility group protein B4-like [Macaca mulatta]
gi|67968844|dbj|BAE00779.1| unnamed protein product [Macaca fascicularis]
Length = 191
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ K+DP P+RPPS+F +F ++ K+ENP+ + V
Sbjct: 64 ALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPSWSVV 123
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
V KA G W + + EK PYE +A L+++Y +++ Y K++
Sbjct: 124 Q-VAKATGKMWSATTDLEKHPYEQRAALLRAKYFEELELYRKQR 166
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 10 KPKANVSSYIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|145536343|ref|XP_001453899.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421632|emb|CAK86502.1| unnamed protein product [Paramecium tetraurelia]
Length = 236
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
EKK ++DPN PK+P +AFF+F +++R+ + NP + ++ + + AG KW SMS EK P
Sbjct: 42 EKKKERDPNAPKKPLTAFFLFNQKYRQKVVERNPEI-KLTQISQMAGNKWTSMSEQEKKP 100
Query: 105 YESKAEKLKSEYGKKMNAYNKK 126
Y + K +Y +++ YN+K
Sbjct: 101 YLDQYNAAKEKYDQELKDYNEK 122
>gi|444730168|gb|ELW70558.1| High mobility group protein B3 [Tupaia chinensis]
Length = 369
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRP S FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 89 DPNAPKRPLSGFFLFSSEFRPKIKSTNPGIS-IGDVAKKLGDMWNNLSDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVANYKSK 163
>gi|358337037|dbj|GAA55457.1| structure-specific recognition protein 1 [Clonorchis sinensis]
Length = 723
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN P RPP+A+ ++ E R K N T+V+ V KAAG +W+++ KA Y
Sbjct: 570 KKRVKDPNAPSRPPTAYIMWFNEHRDEISKSIGNPTSVAEVAKAAGERWRNIDSETKAKY 629
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
+++ ++LK Y +M Y K
Sbjct: 630 QARVDELKKNYESEMRIYRNK 650
>gi|148673204|gb|EDL05151.1| mCG5336 [Mus musculus]
Length = 216
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAVYDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
KA KLK +Y K + AY K
Sbjct: 145 GKKAAKLKEKYEKDIAAYRAK 165
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|46105649|ref|XP_380561.1| hypothetical protein FG00385.1 [Gibberella zeae PH-1]
gi|110287687|sp|Q4IQX3.1|NHP6_GIBZE RecName: Full=Non-histone chromosomal protein 6
gi|408400690|gb|EKJ79767.1| hypothetical protein FPSE_00047 [Fusarium pseudograminearum CS3096]
Length = 101
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+AKKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK+++ ++APY
Sbjct: 15 KRAKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKLLGERWKALNEKQRAPY 73
Query: 106 ESKAEKLKSEYGKKMNAYNKKQ 127
E+KA K Y + AYN Q
Sbjct: 74 EAKAAADKKRYEDEKQAYNADQ 95
>gi|401402785|ref|XP_003881334.1| high mobility group protein, related [Neospora caninum Liverpool]
gi|325115746|emb|CBZ51301.1| high mobility group protein, related [Neospora caninum Liverpool]
Length = 94
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPY 105
KAKKDPN PKRP SAF F ++ R+ ++NP + + ++ VGK G W +S A+K PY
Sbjct: 12 KAKKDPNAPKRPLSAFIFFSKDKREEIIRKNPELKSKLAEVGKMVGEAWGKLSDAQKKPY 71
Query: 106 ESKAEKLKSEYGKKMNAYNK 125
ESKA K+ Y ++M AY K
Sbjct: 72 ESKAVADKARYEREMIAYKK 91
>gi|449270893|gb|EMC81539.1| High mobility group protein B2 [Columba livia]
Length = 207
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R K ++P ++ + K G W S +K PYE KA
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAA 149
Query: 111 KLKSEYGKKMNAYNKKQVTN 130
KLK +Y K + AY K ++
Sbjct: 150 KLKEKYEKDIAAYRAKSKSD 169
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + + +WK+MS EK +E
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEE 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKGDKARYDREMKNY 78
>gi|211929|gb|AAA48819.1| high-mobility group-2 protein [Gallus gallus]
Length = 207
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R K ++P ++ + K G W S +K PYE KA
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAA 149
Query: 111 KLKSEYGKKMNAYNKKQVTN 130
KLK +Y K + AY K ++
Sbjct: 150 KLKEKYEKDIAAYRAKSKSD 169
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ + KK++P+ + + + +WK+MS EK +E
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCPREHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEE 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKGDKARYDREMKNY 78
>gi|358379174|gb|EHK16855.1| hypothetical protein TRIVIDRAFT_217092 [Trichoderma virens Gv29-8]
Length = 102
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
G+K GK K+ KKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK+
Sbjct: 10 GAKDGGK--KRTKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKLLGERWKA 66
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
++ ++APYE+KA K Y + AYN Q
Sbjct: 67 LNDKQRAPYEAKAAADKKRYEDEKQAYNADQ 97
>gi|402853838|ref|XP_003891595.1| PREDICTED: high mobility group protein B4 [Papio anubis]
Length = 191
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR+K+ K+DP P+RPPS+F +F ++ K+ENP+ + V
Sbjct: 64 ALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPSWSVV 123
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
V KA G W + + EK PYE +A L+++Y +++ Y K++
Sbjct: 124 Q-VAKATGKMWSATTDLEKHPYEQRAALLRAKYFEELERYRKQR 166
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 10 KPKANVSSYIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|118344422|ref|NP_001072036.1| transcription factor protein [Ciona intestinalis]
gi|70570508|dbj|BAE06614.1| transcription factor protein [Ciona intestinalis]
Length = 447
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 11/93 (11%)
Query: 38 SKRQGKREKKAK------KDPNKPKRPPSAFFVFLEEFRKTFK-KENPNVTAVSAVGKAA 90
S+R +R +K K +DPN+PKRPPSA+F+FL +FRK + K +P + K A
Sbjct: 244 SRRDRERWQKDKALEKKPRDPNRPKRPPSAYFLFLADFRKNYPGKSDP----AKEITKKA 299
Query: 91 GGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
G W S+S AEK PY A+ +++++ + + AY
Sbjct: 300 GEAWNSLSDAEKTPYYRSAQLVRAKWEQDLEAY 332
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 40 RQGKR--EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
R+G++ +KK +K KRP +A+ F+ ++R+T K+ V + +A KW++M
Sbjct: 173 RRGRKPTDKKKRKRHTWVKRPTTAYLYFVSKYRETLKEAGEVVPKAKIITQACAEKWRNM 232
Query: 98 SPAEKAPY 105
+ EK P+
Sbjct: 233 NEEEKEPF 240
>gi|448079731|ref|XP_004194450.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
gi|359375872|emb|CCE86454.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
Length = 92
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
S + KR + KKDP+ PKR SA+ F E R + ENP ++ VGK G KWK+M
Sbjct: 2 STTEKKRASRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGIS-FGQVGKLLGEKWKAM 60
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
S +K PYE+KAE K Y K+ Y KK
Sbjct: 61 SSEDKTPYETKAEADKKRYEKEKAEYAKK 89
>gi|448084218|ref|XP_004195549.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
gi|359376971|emb|CCE85354.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
Length = 92
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
S + KR + KKDP+ PKR SA+ F E R + ENP ++ VGK G KWK+M
Sbjct: 2 STTEKKRASRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGIS-FGQVGKLLGEKWKAM 60
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
+ +K PYESKAE K Y K+ Y KK
Sbjct: 61 TSDDKTPYESKAEADKKRYEKEKAEYAKK 89
>gi|75218951|sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein 1
gi|2104679|emb|CAA66480.1| transcription factor [Vicia faba var. minor]
Length = 642
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR S F F + R+ KK NP ++ + VG+ G KWK++S EK PYE+KA+
Sbjct: 554 DPNAPKRALSGFMFFSQMERENLKKTNPGIS-FTDVGRVLGEKWKNLSAEEKEPYEAKAQ 612
Query: 111 KLKSEYGKKMNAYNKKQVTNL 131
K Y +++ Y Q N+
Sbjct: 613 ADKKRYKDEISGYKNPQPMNV 633
>gi|327268628|ref|XP_003219098.1| PREDICTED: high mobility group protein B2-like [Anolis
carolinensis]
Length = 209
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K +KDPN PKRPPSAFF+F E R K ++P ++ + K G W + +K P+E
Sbjct: 85 KKRKDPNAPKRPPSAFFLFCSEHRPKIKSDHPGLS-IGDTAKKLGEMWSLQTAKDKLPFE 143
Query: 107 SKAEKLKSEYGKKMNAYNKKQVTN 130
KA KLK +Y K + AY K ++
Sbjct: 144 QKALKLKEKYDKDIAAYRAKDKSD 167
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DPNKP+ S++ F++ R+ KK++P+ + + K +W++MS EK +E
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWRTMSAKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 62 DMAKGDKARYDREMKNY 78
>gi|326499588|dbj|BAJ86105.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+KPK+P SA+F++ +E R E V +GK G +WK M+ A+KAPYE A
Sbjct: 330 DPSKPKQPMSAYFLYSQERRGALVAEK---KTVPEIGKITGEEWKGMTEAQKAPYEEAAR 386
Query: 111 KLKSEYGKKMNAYNKKQV 128
K K Y K+M YN+K++
Sbjct: 387 KQKEAYQKQMEVYNQKKL 404
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PK+P S+F +F +E RK +E P V S + KWK +S AEK + KA
Sbjct: 455 DPNRPKKPASSFLLFSKEARKQLAEERPGVNN-STLSALISVKWKDLSSAEKKVWSQKAA 513
Query: 111 KLKSEYGKKMNAYNKKQVTN 130
+ + Y +M+ Y K ++
Sbjct: 514 QGMAAYKMEMDEYTKAHTSS 533
Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N+ K+P A+ ++ ++ KK +P+ T V A G KWK++S EK PYE + +
Sbjct: 211 NERKKPAPAYILWCKDQWAEIKK-SPD-TDFKEVTNALGAKWKTLSNEEKQPYEERYRQE 268
Query: 113 KSEY 116
K Y
Sbjct: 269 KEAY 272
>gi|226372550|gb|ACO51900.1| High mobility group protein B2 [Rana catesbeiana]
Length = 212
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R K + P ++ + K G W +P +K P+E KA
Sbjct: 92 DPNAPKRPPSAFFLFCSENRPQIKNDTPGLS-IGDTAKKLGELWSEQTPKDKQPFEQKAA 150
Query: 111 KLKSEYGKKMNAYNKKQVTNL 131
KLK +Y K + AY K +++
Sbjct: 151 KLKEKYEKDVAAYRAKGSSDV 171
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVT-AVSAVGKAAGGKWKSMSPAEKAPYE 106
K DPNKP+ S++ F++ R+ KK++P+ + + + K +WK+MS K +E
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVSFAEFSKKCSERWKTMSAKGKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 DLAKGDKVRYEREMKTY 78
>gi|365762037|gb|EHN03653.1| Nhp6bp [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401841847|gb|EJT44170.1| NHP6B-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 102
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR SA+ F E R + ENP+VT VG+ G KWK+++ +K
Sbjct: 18 KRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVT-FGQVGRILGEKWKALTAEDK 76
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PYESKA+ K Y + YN
Sbjct: 77 QPYESKAQADKKRYESEKELYN 98
>gi|351706443|gb|EHB09362.1| High mobility group protein B3 [Heterocephalus glaber]
Length = 226
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K P +T + V K G W ++S +EK PY +K
Sbjct: 108 DPNAPKRPPSGFFLFCSEFRPKIKSTKPGIT-IGDVAKKLGEMWNNLSDSEKQPYITKVA 166
Query: 111 KLKSEYGKKMNAYNKK 126
KLK ++ K + Y K
Sbjct: 167 KLKEKHEKDVADYKSK 182
>gi|342874398|gb|EGU76412.1| hypothetical protein FOXB_13090 [Fusarium oxysporum Fo5176]
Length = 102
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
+G + + ++ K+ KKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK
Sbjct: 6 AGKRGKAEKTKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKLLGERWK 64
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
+++ ++APYE+KA K Y + AYN Q
Sbjct: 65 ALNEKQRAPYEAKAAADKKRYEDEKQAYNADQ 96
>gi|429860623|gb|ELA35353.1| nucleosome binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 103
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 42 GKREKK-AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
GK EKK KKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK+++
Sbjct: 12 GKVEKKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKILGERWKALNDK 70
Query: 101 EKAPYESKAEKLKSEYGKKMNAYNKKQ 127
++APYE+KA K Y + AYN Q
Sbjct: 71 QRAPYEAKAAADKKRYEDEKQAYNADQ 97
>gi|392300930|gb|EIW12019.1| Nhp6bp [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 162
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR SA+ F E R + ENP+VT VG+ G +WK+++ EK
Sbjct: 78 KRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVT-FGQVGRILGERWKALTAEEK 136
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PYESKA+ K Y + YN
Sbjct: 137 QPYESKAQADKKRYESEKELYN 158
>gi|367043490|ref|XP_003652125.1| hypothetical protein THITE_126111 [Thielavia terrestris NRRL 8126]
gi|346999387|gb|AEO65789.1| hypothetical protein THITE_126111 [Thielavia terrestris NRRL 8126]
Length = 103
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 42 GKREKK-AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
GK EK+ KKDPN PKR SA+ F E R+ ++ENP V+ VGK G +WK++S
Sbjct: 10 GKVEKRRGKKDPNAPKRGLSAYMFFANEQRENVREENPGVS-FGQVGKILGERWKALSDK 68
Query: 101 EKAPYESKAEKLKSEYGKKMNAYN 124
++APYE+KA K Y + AYN
Sbjct: 69 QRAPYEAKAAADKKRYEDEKQAYN 92
>gi|395732940|ref|XP_002813012.2| PREDICTED: nuclear autoantigen Sp-100-like [Pongo abelii]
Length = 263
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPP AFF+F E+R K E+P ++ V K A G W + + A+K YE+KA
Sbjct: 150 DPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLA-GMWNNTAAADKQFYENKAA 208
Query: 111 KLKSEYGKKMNAYNKK 126
+LK +Y K + AY K
Sbjct: 209 RLKEKYKKDIAAYRAK 224
>gi|167536391|ref|XP_001749867.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771582|gb|EDQ85246.1| predicted protein [Monosiga brevicollis MX1]
Length = 197
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R+K+AKKDPNKPK SA+ F ++ R F K+NP+ ++ V K G W+ MS A K
Sbjct: 27 RQKRAKKDPNKPKNAQSAYMFFSQKVRPQFSKDNPD-KKMTDVSKLIGAAWREMSDAAKK 85
Query: 104 PYESKAEKLKSEYGKKMNAY 123
PYE A + K Y +M Y
Sbjct: 86 PYEEMARRDKQRYQHQMATY 105
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR K+ +KDP+ PK+P +A+F++ + R + +N N T V+ + K G +WK +S A
Sbjct: 114 GKRGKR-RKDPDAPKKPLTAYFLYAADRRAALRAQNRNAT-VADIAKIIGAEWKDLSDAV 171
Query: 102 KAPYESKAEKLKSEYGKKMNAY 123
K PY+ +A++LKS+Y K++ Y
Sbjct: 172 KKPYQDRADRLKSQYQKEVELY 193
>gi|254580675|ref|XP_002496323.1| ZYRO0C15752p [Zygosaccharomyces rouxii]
gi|238939214|emb|CAR27390.1| ZYRO0C15752p [Zygosaccharomyces rouxii]
Length = 98
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R + ENP+VT VG+ G KWK+++P EK PYE+KAE
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRAENPDVT-FGQVGRILGEKWKALTPDEKTPYEAKAE 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|444729655|gb|ELW70064.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G+ EKK K DPN PKRPP AFF+F E+ K+E+P+++ + V K G W + +
Sbjct: 82 KGETEKKFK-DPNVPKRPPLAFFLFCSEYHPKIKEEHPDLS-IGDVAKILGEMWNNTAAD 139
Query: 101 EKAPYESKAEKLKSEYGKKMNAY 123
+K PYE KA KLK +Y K + AY
Sbjct: 140 DKQPYE-KAAKLKEKYEKDIAAY 161
>gi|58268918|ref|XP_571615.1| nonhistone protein 6 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112618|ref|XP_774852.1| hypothetical protein CNBF0170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818300|sp|P0CO25.1|NHP6_CRYNB RecName: Full=Non-histone chromosomal protein 6
gi|338818301|sp|P0CO24.1|NHP6_CRYNJ RecName: Full=Non-histone chromosomal protein 6
gi|50257500|gb|EAL20205.1| hypothetical protein CNBF0170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227850|gb|AAW44308.1| nonhistone protein 6, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 116
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+ KKDPNKPKR SA+ F++++R+ K ENP T VGK G KW+ M+ EK PY
Sbjct: 19 KRTKKDPNKPKRALSAYMFFVQDYRERIKTENPEAT-FGDVGKLLGIKWREMNENEKKPY 77
Query: 106 ESKA 109
E+KA
Sbjct: 78 EAKA 81
>gi|223649496|gb|ACN11506.1| High mobility group protein B3 [Salmo salar]
Length = 207
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKRPPS FF+F + R K ++P++ + V K G +W +++ A K PY K
Sbjct: 87 KKDPNAPKRPPSGFFIFCADHRPKIKAQHPSL-GIGDVAKKLGEQWNNLTDATKQPYLIK 145
Query: 109 AEKLKSEYGKKMNAY 123
A KLK +Y K + Y
Sbjct: 146 ANKLKDKYQKDVADY 160
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK P KPK SA+ F++ R+ KK++P + + K G+WK+MS EK +E
Sbjct: 2 AKGTPGKPKGKMSAYAYFVQTCREEHKKKSPEIPVNFAEFSKKCSGRWKTMSGKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A++ K Y +M +
Sbjct: 62 DMAKQDKVRYDNEMMHF 78
>gi|291403518|ref|XP_002718101.1| PREDICTED: high mobility group box 3-like [Oryctolagus cuniculus]
Length = 197
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S ++K Y +KA
Sbjct: 89 DPNAPKRPPSRFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSDKQQYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVTDYKSK 163
>gi|118343940|ref|NP_001071792.1| transcription factor protein [Ciona intestinalis]
gi|70570753|dbj|BAE06615.1| transcription factor protein [Ciona intestinalis]
Length = 310
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 11/93 (11%)
Query: 38 SKRQGKREKKAK------KDPNKPKRPPSAFFVFLEEFRKTFK-KENPNVTAVSAVGKAA 90
S+R +R +K K +DPN+PKRPPSA+F+FL +FRK + K +P + K A
Sbjct: 107 SRRDRERWQKDKALEKKPRDPNRPKRPPSAYFLFLADFRKNYPGKSDP----AKEITKKA 162
Query: 91 GGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
G W S+S AEK PY A+ +++++ + + AY
Sbjct: 163 GEAWNSLSDAEKTPYYRSAQLVRAKWEQDLEAY 195
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 40 RQGKR--EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
R+G++ +KK +K KRP +A+ F+ ++R+T K+ V + +A KW++M
Sbjct: 36 RRGRKPTDKKKRKRHTWVKRPTTAYLYFVSKYRETLKEAGEVVPKAKIITQACAEKWRNM 95
Query: 98 SPAEKAPY 105
+ EK P+
Sbjct: 96 NEEEKEPF 103
>gi|148277100|ref|NP_081312.2| high mobility group protein B4 [Mus musculus]
gi|81892334|sp|Q6P8W9.1|HMGB4_MOUSE RecName: Full=High mobility group protein B4
gi|38174595|gb|AAH61030.1| High-mobility group box 4 [Mus musculus]
gi|148698295|gb|EDL30242.1| high-mobility group box 4 [Mus musculus]
Length = 181
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 7/100 (7%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A A+LD +Q GKR K+ K+DP P++PPS+F +F + K+ENP+ T V
Sbjct: 62 ALAELDKARYQQEMMNYIGKRRKRRKRDPKAPRKPPSSFLLFSRDHYAMLKQENPDWTVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
V KAAG W + AEK PYE KA ++++Y ++ AY
Sbjct: 122 Q-VAKAAGKMWSTTDEAEKKPYEQKAALMRAKYFEEQEAY 160
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYES 107
+KD +PK S++ F+ FR FK++ PN + KW+S+S EKA YE+
Sbjct: 3 EKDQLRPKVNVSSYIHFMLNFRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEA 62
Query: 108 KAEKLKSEYGKKMNAY 123
AE K+ Y ++M Y
Sbjct: 63 LAELDKARYQQEMMNY 78
>gi|403217000|emb|CCK71495.1| hypothetical protein KNAG_0H00800 [Kazachstania naganishii CBS
8797]
Length = 118
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR SA+ F E R K ENPN T +GK G KWK+MS +K
Sbjct: 33 KRVTRKKKDPNAPKRSMSAYMFFANENRDIVKSENPNAT-FGQLGKLLGEKWKNMSTEDK 91
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PY++KA K Y + YN
Sbjct: 92 EPYDAKAAADKKRYESEKELYN 113
>gi|392337480|ref|XP_003753270.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392343959|ref|XP_003748829.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 215
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWTNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
A KLK +Y K + AY K
Sbjct: 145 GKMAAKLKEKYEKDIAAYRAK 165
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKCED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|256080078|ref|XP_002576310.1| structure specific recognition protein [Schistosoma mansoni]
gi|350646026|emb|CCD59303.1| structure specific recognition protein,putative [Schistosoma
mansoni]
Length = 632
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
SKRQ K++KK K DPN P RP SA+F++ E R+ K +V+ V KAAG W++M
Sbjct: 530 SKRQTKKQKKPK-DPNAPTRPLSAYFLWFNENREKIAKNLGGQNSVAEVAKAAGEIWRNM 588
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNKKQVTNLVPFFNS 137
K+ Y+S+ ++LK +Y + + Y +N P +S
Sbjct: 589 DSTAKSSYQSRVDELKKKYQEDLRIYQSNLGSNKEPDLSS 628
>gi|225703820|gb|ACO07756.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 193
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
++KK KDPN KRPPSAFF+F +FR K E+P ++ + K G W S + EK
Sbjct: 83 QKKKRFKDPNALKRPPSAFFIFCADFRAKIKSEHPGLS-IGDTAKKLGVMWNSSAAEEKK 141
Query: 104 PYESKAEKLKSEYGKKMNAY 123
PYE KA LK +Y K + +Y
Sbjct: 142 PYEKKAATLKEKYDKDIASY 161
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R KK+ P + + K +WK MSP EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKQPEASVNFAEFSKKCSERWKPMSPKEKGTFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|307105669|gb|EFN53917.1| hypothetical protein CHLNCDRAFT_136125 [Chlorella variabilis]
Length = 101
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRP SA+ F + R KK +P+++ + VGKA G WK +S EK PY+ KA+
Sbjct: 27 DPNAPKRPLSAYMYFASDKRVEMKKSDPSLS-LGEVGKATGAAWKELSDKEKEPYQKKAD 85
Query: 111 KLKSEYGKKMNAYNKK 126
K K+ Y K+ AY KK
Sbjct: 86 KDKARYEKEKAAYEKK 101
>gi|405121060|gb|AFR95829.1| nonhistone protein 6 [Cryptococcus neoformans var. grubii H99]
Length = 116
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+ KKDPNKPKR SA+ F++++R+ K ENP T VGK G KW+ M+ EK PY
Sbjct: 19 KRTKKDPNKPKRALSAYMFFVQDYRERIKAENPEAT-FGDVGKLLGIKWREMNENEKKPY 77
Query: 106 ESKA 109
E+KA
Sbjct: 78 EAKA 81
>gi|302926833|ref|XP_003054372.1| HMG box-containing protein [Nectria haematococca mpVI 77-13-4]
gi|256735313|gb|EEU48659.1| HMG box-containing protein [Nectria haematococca mpVI 77-13-4]
Length = 101
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 33 KLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGG 92
K D+G KR +K+ KKDPN PKR SA+ F E R+ ++ENP ++ VGK G
Sbjct: 3 KADAG-KRGKAVKKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKLLGE 60
Query: 93 KWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
+WK+++ ++APYE+KA K Y + AYN Q
Sbjct: 61 RWKALNEKQRAPYEAKAAADKKRYEDEKQAYNADQ 95
>gi|351710199|gb|EHB13118.1| High mobility group protein B3 [Heterocephalus glaber]
Length = 191
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN KRPPS FF+F EF K NP ++ + V K G W +++ +EK PY
Sbjct: 85 KKKKDPNATKRPPSGFFLFCSEFHPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYI 143
Query: 107 SKAEKLKSEYGKKMNA 122
+KA KLK +Y K + A
Sbjct: 144 TKAAKLKEKYEKDVAA 159
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP+V + K +WK++S EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPDVPVNFAEFSKKCSERWKTVSGKEKSKFDEMAKADKVHYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|444510285|gb|ELV09567.1| High mobility group protein B3 [Tupaia chinensis]
Length = 197
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K NP ++ + V K G W ++S +EK PY +KA
Sbjct: 77 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYITKAA 135
Query: 111 KLK 113
KLK
Sbjct: 136 KLK 138
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 2 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 61
Query: 119 KMNAY 123
+M Y
Sbjct: 62 EMKDY 66
>gi|119187239|ref|XP_001244226.1| hypothetical protein CIMG_03667 [Coccidioides immitis RS]
gi|303317166|ref|XP_003068585.1| Nonhistone chromosomal protein 6B, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108266|gb|EER26440.1| Nonhistone chromosomal protein 6B, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320038503|gb|EFW20438.1| nucleosome binding protein Nhp6a [Coccidioides posadasii str.
Silveira]
gi|392870942|gb|EAS32789.2| non-histone chromosomal protein 6 [Coccidioides immitis RS]
Length = 102
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
S + +G+R +K KKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK
Sbjct: 6 STRQTKGRRAEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKLLGERWK 64
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYN 124
++S ++APYE KA K Y + YN
Sbjct: 65 ALSDKQRAPYEEKAAADKKRYEDEKANYN 93
>gi|444729656|gb|ELW70065.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G+ EKK K DPN PKRPP AFF+F E+ K+E+P+++ + V K G W + +
Sbjct: 82 KGETEKKFK-DPNVPKRPPLAFFLFCSEYHPKIKEEHPDLS-IGDVAKKLGEMWNNTAAD 139
Query: 101 EKAPYESKAEKLKSEYGKKMNAY 123
+K PYE KA KLK +Y K + AY
Sbjct: 140 DKQPYE-KAAKLKEKYEKDIAAY 161
>gi|315051466|ref|XP_003175107.1| non-histone chromosomal protein 6 [Arthroderma gypseum CBS 118893]
gi|311340422|gb|EFQ99624.1| non-histone chromosomal protein 6 [Arthroderma gypseum CBS 118893]
Length = 102
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KKDPN PKR SA+ +F E R + ++ENP++T VGK G +WK+++ ++ PY
Sbjct: 16 EKKKKDPNAPKRGLSAYMIFANEQRASVREENPSIT-FGQVGKVLGERWKALTDKQRKPY 74
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA K Y + AYN +
Sbjct: 75 EEKAATDKQRYEDEKAAYNSR 95
>gi|448530095|ref|XP_003869985.1| Nhp6a non-histone chromatin component [Candida orthopsilosis Co
90-125]
gi|354547725|emb|CCE44460.1| hypothetical protein CPAR2_402610 [Candida parapsilosis]
gi|380354339|emb|CCG23854.1| Nhp6a non-histone chromatin component [Candida orthopsilosis]
Length = 93
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
G KR+ R+KK DP+ PKR SA+ F E R + ENP ++ VGKA G KWK+
Sbjct: 5 GEKRKVSRKKK---DPDAPKRSLSAYMFFANENRDIVRAENPGIS-FGQVGKALGDKWKA 60
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
+S +K PYE+KAE K Y K+ Y KK
Sbjct: 61 LSAEDKVPYENKAEADKKRYEKEKAEYAKK 90
>gi|403295522|ref|XP_003938690.1| PREDICTED: high mobility group protein B3-like [Saimiri boliviensis
boliviensis]
Length = 202
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN KRPPS FF+F EFR K NP ++ + V K G W +++ +EK PY +KA
Sbjct: 89 DPNASKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK DP KPK SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++
Sbjct: 2 AKCDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFD 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 EMAKADKVRYDREMKDY 78
>gi|145540136|ref|XP_001455758.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423566|emb|CAK88361.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA--------VSAVGKAAGGKWKS 96
EKK ++DPN PKRP + FF+F +++R + NP + ++ + + AG KW S
Sbjct: 23 EKKKERDPNAPKRPLTPFFLFSQKYRDKVLERNPGIDQRDYSLEVKLTQISQMAGQKWNS 82
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQVTN 130
MS EK PY + + K++Y + YN K N
Sbjct: 83 MSEEEKQPYVDQYNEAKNKYDGDLKVYNDKHGLN 116
>gi|147903143|ref|NP_001079387.1| high mobility group box 2 [Xenopus laevis]
gi|80479234|gb|AAI08500.1| MGC52825 protein [Xenopus laevis]
Length = 211
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R K E P ++ + K G +W + +K P+E KA
Sbjct: 92 DPNAPKRPPSAFFLFCSEQRPQIKSETPGLS-IGDTAKKLGERWSEQTSKDKLPFEQKAA 150
Query: 111 KLKSEYGKKMNAYNKKQVTNL 131
KLK +Y K + AY K +++
Sbjct: 151 KLKEKYEKDVAAYRAKGKSDV 171
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK +E
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 DMAKGDKVRYEREMKTY 78
>gi|27370889|gb|AAH41262.1| MGC52825 protein [Xenopus laevis]
Length = 212
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R K E P ++ + K G +W + +K P+E KA
Sbjct: 92 DPNAPKRPPSAFFLFCSEQRPQIKSETPGLS-IGDTAKKLGERWSEQTSKDKLPFEQKAA 150
Query: 111 KLKSEYGKKMNAYNKKQVTNL 131
KLK +Y K + AY K +++
Sbjct: 151 KLKEKYEKDVAAYRAKGKSDV 171
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK +E
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 DMAKGDKVRYEREMKTY 78
>gi|109490746|ref|XP_001074778.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392351213|ref|XP_003750876.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 211
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PK PPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKTPPSAFFLFCSEYRPKIKGEHPGLS-IGDVVKKLGEMWTNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E A KLK +Y K + AY K
Sbjct: 145 EKMAAKLKEKYEKDIAAYRAK 165
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP K + S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|365982187|ref|XP_003667927.1| hypothetical protein NDAI_0A05290 [Naumovozyma dairenensis CBS 421]
gi|343766693|emb|CCD22684.1| hypothetical protein NDAI_0A05290 [Naumovozyma dairenensis CBS 421]
Length = 93
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
+R + KKDPN PKR SA+ F + R K ENPN+T +GK G KWK ++ EK
Sbjct: 9 RRVVRRKKDPNAPKRGLSAYMFFANDNRDIVKAENPNIT-FGQIGKVLGAKWKELNDEEK 67
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PY+ KA+ K Y + YN
Sbjct: 68 QPYQDKADADKKRYESEKELYN 89
>gi|400599237|gb|EJP66941.1| HMG box protein [Beauveria bassiana ARSEF 2860]
Length = 96
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+AKKDPN PKR SA+ F E R+ ++ENP V+ VGK G +WK++S ++ PY
Sbjct: 17 KRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVS-FGQVGKILGERWKALSDKQRTPY 75
Query: 106 ESKAEKLKSEYGKKMNAYN 124
E+KA K Y + AYN
Sbjct: 76 EAKAAADKKRYEDEKAAYN 94
>gi|224080027|ref|XP_002305996.1| high mobility group family [Populus trichocarpa]
gi|222848960|gb|EEE86507.1| high mobility group family [Populus trichocarpa]
Length = 165
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%)
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
P+AFF FLE+FRK F+++NP+V ++ VGKA G KWK+M+ EK Y A + ++E+ +
Sbjct: 81 PTAFFYFLEDFRKEFQEQNPDVKSMREVGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 140
Query: 119 KMNAYNKK 126
+ Y K+
Sbjct: 141 ATSEYIKR 148
>gi|167384542|ref|XP_001736998.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900416|gb|EDR26737.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 112
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN+PKRP + +F++L E R + K+E+P+ V+ + K A +WK++ EK Y++KA+
Sbjct: 23 PNRPKRPQTPYFLYLHEHRASIKEEHPDA-KVTEIAKIASEQWKALGEEEKKEYQAKADA 81
Query: 112 LKSEYGKKMNAYN-KKQVT 129
K +Y K M Y KKQV+
Sbjct: 82 AKEQYKKDMEKYTGKKQVS 100
>gi|294463267|gb|ADE77169.1| unknown [Picea sitchensis]
Length = 482
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 66/125 (52%), Gaps = 11/125 (8%)
Query: 8 GAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKRE-----KKAKKDPNKPKRPPSA 61
G R EALK +D + K+K A L+ + Q E K+ +KDP+KPK P +A
Sbjct: 202 GQERRETEALKLLHDEQ--KQKTALELLEQYLQYQKDAEGKEKSKRKEKDPSKPKHPVTA 259
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
FF F E R +EN NV + K G +WK+M+ E+APYE A + K +Y +M
Sbjct: 260 FFAFTNERRAALLEENHNVL---QIAKILGEEWKNMTKEERAPYEQIAAEAKEKYMGEME 316
Query: 122 AYNKK 126
Y +K
Sbjct: 317 LYKQK 321
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PK+PP++F +F +E RK +E P V + + KWK + AEK + +A
Sbjct: 377 DPNRPKKPPTSFLLFSKETRKKLVQERPGVNNTT-INALISLKWKDLGTAEKQKWVDEAA 435
Query: 111 KLKSEYGKKMNAYNKKQV 128
+Y K++ YNK V
Sbjct: 436 GAMVQYKKEVEEYNKLHV 453
>gi|348566777|ref|XP_003469178.1| PREDICTED: high mobility group protein B2-like [Cavia porcellus]
Length = 211
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA K
Sbjct: 93 PNAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAK 151
Query: 112 LKSEYGKKMNAYNKK 126
LK +Y K + AY K
Sbjct: 152 LKEKYEKDIAAYRAK 166
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|326437020|gb|EGD82590.1| hypothetical protein PTSG_03243 [Salpingoeca sp. ATCC 50818]
Length = 210
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G R +K KKDPN PK+P SA+FVF E R + + P VS K G +W+ M+
Sbjct: 124 EGGRRRKKKKDPNAPKKPKSAYFVFAETRRDALRAQYPE-DRVSDTAKRTGEEWRGMTEE 182
Query: 101 EKAPYESKAEKLKSEYGKKMNAY 123
+K P++ KA++LK EY + + Y
Sbjct: 183 QKRPFQLKAQELKQEYDQAVAEY 205
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKP+ + + F +E R +++PN + V+ V K G +W+ ++ +K PY A
Sbjct: 45 DPNKPRGALTPYMCFNKEVRPAIMQQHPNAS-VTEVAKLIGAQWRQLTDEQKKPYNDMAR 103
Query: 111 KLKSEYGKKMNAY 123
+ Y + M Y
Sbjct: 104 TDRERYKEAMKNY 116
>gi|50304233|ref|XP_452066.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74636989|sp|Q6CVH3.1|NHP6_KLULA RecName: Full=Non-histone chromosomal protein 6
gi|49641198|emb|CAH02459.1| KLLA0B12056p [Kluyveromyces lactis]
Length = 93
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K+ ++ KKDPN PKR SA+ F E R + ENP +T VG+ G KWK+++ EK
Sbjct: 6 KKTQRKKKDPNAPKRALSAYMFFANENRDIVRAENPGIT-FGQVGRILGEKWKALNEDEK 64
Query: 103 APYESKAEKLKSEYGKKMNAY 123
APYE+KAE K Y + Y
Sbjct: 65 APYEAKAEADKKRYESEKELY 85
>gi|313224350|emb|CBY20139.1| unnamed protein product [Oikopleura dioica]
Length = 91
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
+AKKDPN PKRP +AFF+F + R KK P + VS V K G WK + K Y+
Sbjct: 3 RAKKDPNAPKRPQTAFFLFAADNRADAKKCLPEGSRVSEVAKKLGVMWKEVDAKTKEKYQ 62
Query: 107 SKAEKLKSEYGKKMNAYNKKQVT 129
S+AE+ K++Y ++M AY Q
Sbjct: 63 SQAEENKAKYAEEMEAYRNSQAV 85
>gi|67475910|ref|XP_653586.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56470556|gb|EAL48200.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449703217|gb|EMD43706.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica KU27]
Length = 111
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN+PKRPP+ +F++L E R + K+E+P+ V+ + K A +WK++ EK Y++KA+
Sbjct: 23 PNRPKRPPTPYFLYLNEHRASIKEEHPDAK-VTEIAKIASEQWKALGEEEKKEYQTKADA 81
Query: 112 LKSEYGKKMNAYN-KKQVT 129
K +Y K + Y+ KKQ +
Sbjct: 82 AKEQYKKDIEKYDGKKQAS 100
>gi|321259756|ref|XP_003194598.1| nonhistone protein 6 [Cryptococcus gattii WM276]
gi|317461070|gb|ADV22811.1| Nonhistone protein 6, putative [Cryptococcus gattii WM276]
Length = 110
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+++KKDPNKPKR SA+ F++++R+ K ENP T VGK G KW+ M+ EK PY
Sbjct: 19 RRSKKDPNKPKRALSAYMFFVQDYRERIKAENPEAT-FGDVGKLLGIKWREMNENEKKPY 77
Query: 106 ESKA 109
E+KA
Sbjct: 78 EAKA 81
>gi|444518140|gb|ELV11977.1| High mobility group protein B3 [Tupaia chinensis]
Length = 198
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + G+ EK KDPN PKR PS FF+F EFR K NP ++ + V K G W
Sbjct: 77 DYGPAKGGEEEKG--KDPNAPKRRPSVFFLFCSEFRLKIKSTNPGIS-IGDVAKKLGDVW 133
Query: 95 KSMSPAEKAPYESKAEKLK 113
++S +EK PY +KA KLK
Sbjct: 134 NNLSDSEKQPYITKAAKLK 152
>gi|426215132|ref|XP_004001831.1| PREDICTED: high mobility group protein B4 [Ovis aries]
Length = 196
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 62/100 (62%), Gaps = 7/100 (7%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ G+R+K+ K+DP+ P+RPPS+F +F ++ K ENP+ + V
Sbjct: 64 ALAKLDKARYQEEMMNYLGRRKKRRKRDPHAPRRPPSSFLLFCQDHYAQLKSENPSWSVV 123
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
V KA+G W + + +K PYE +A L+++Y ++++ Y
Sbjct: 124 Q-VAKASGKMWSAKTDVDKQPYEQRAALLRAKYREELSVY 162
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYES 107
K+D KPK S++ FL +R FK++ PN + KW+S+S EKA YE+
Sbjct: 5 KRDHLKPKANVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEA 64
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 65 LAKLDKARYQEEMMNY 80
>gi|401839076|gb|EJT42436.1| NHP6A-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 93
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R + ENP++T VGK G KWK+++P EK PYE+KA+
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDIT-FGQVGKKLGEKWKALTPEEKQPYEAKAQ 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|6325309|ref|NP_015377.1| Nhp6ap [Saccharomyces cerevisiae S288c]
gi|128182|sp|P11632.1|NHP6A_YEAST RecName: Full=Non-histone chromosomal protein 6A
gi|24987379|pdb|1J5N|A Chain A, Solution Structure Of The Non-Sequence-Specific Hmgb
Protein Nhp6a In Complex With Sry Dna
gi|24987655|pdb|1LWM|A Chain A, Solution Structure Of The Sequence-Non-Specific Hmgb
Protein Nhp6a
gi|4034|emb|CAA33377.1| unnamed protein product [Saccharomyces cerevisiae]
gi|171883|gb|AAA34754.1| high mobility group non-histone protein [Saccharomyces cerevisiae]
gi|805034|emb|CAA89171.1| Nhp6ap [Saccharomyces cerevisiae]
gi|1314122|emb|CAA94998.1| Nhp6ap [Saccharomyces cerevisiae]
gi|51013911|gb|AAT93249.1| YPR052C [Saccharomyces cerevisiae]
gi|285815583|tpg|DAA11475.1| TPA: Nhp6ap [Saccharomyces cerevisiae S288c]
gi|392296063|gb|EIW07166.1| Nhp6ap [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 93
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R + ENP++T VGK G KWK+++P EK PYE+KA+
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDIT-FGQVGKKLGEKWKALTPEEKQPYEAKAQ 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|62638360|ref|XP_574279.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|109460525|ref|XP_001074365.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
Length = 209
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K EY K + AY K
Sbjct: 152 KEEYEKDIAAYRAK 165
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ K ++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKNKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|403222987|dbj|BAM41118.1| high-mobility-group protein [Theileria orientalis strain Shintoku]
Length = 93
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVT-AVSAVGKAAGGKW 94
S S ++GKR KKDPN PKR S++ F +E R KENP++ V+ VGK G W
Sbjct: 6 SKSAKKGKR---TKKDPNAPKRALSSYMFFAKEKRNELIKENPDLAKDVATVGKLVGAAW 62
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
S+ +EKAPYE AE + Y ++ Y K
Sbjct: 63 NSLDDSEKAPYEKLAEADRERYEREKLEYQK 93
>gi|151942838|gb|EDN61184.1| nonhistone chromosomal protein [Saccharomyces cerevisiae YJM789]
gi|190407991|gb|EDV11256.1| 11 kDa nonhistone chromosomal protein [Saccharomyces cerevisiae
RM11-1a]
gi|256268928|gb|EEU04275.1| Nhp6ap [Saccharomyces cerevisiae JAY291]
gi|259150205|emb|CAY87008.1| Nhp6ap [Saccharomyces cerevisiae EC1118]
gi|349581863|dbj|GAA27020.1| K7_Nhp6ap [Saccharomyces cerevisiae Kyokai no. 7]
Length = 93
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R + ENP++T VGK G KWK+++P EK PYE+KA+
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDIT-FGQVGKKLGEKWKALTPEEKQPYEAKAQ 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|171680363|ref|XP_001905127.1| hypothetical protein [Podospora anserina S mat+]
gi|170939808|emb|CAP65034.1| unnamed protein product [Podospora anserina S mat+]
Length = 98
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
+ KKDPN PKR SA+ F E R+ ++ENP V+ VGK G +WK++S ++APYE
Sbjct: 18 RGKKDPNAPKRGLSAYMFFANEQRENVREENPGVS-FGQVGKILGERWKALSDKQRAPYE 76
Query: 107 SKAEKLKSEYGKKMNAYN 124
+KA K Y + AYN
Sbjct: 77 AKAAADKKRYEDEKQAYN 94
>gi|302309760|ref|XP_002999554.1| hypothetical protein [Candida glabrata CBS 138]
gi|196049084|emb|CAR57991.1| unnamed protein product [Candida glabrata]
Length = 93
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKR SA+ F E R + ENP+VT +G+ G +WK+++ +K PYE+K
Sbjct: 15 KKDPNAPKRALSAYMFFANENRDIVRSENPDVT-FGQIGRLLGERWKALTAEDKQPYEAK 73
Query: 109 AEKLKSEYGKKMNAYN 124
AE K Y + YN
Sbjct: 74 AEADKKRYESEKELYN 89
>gi|380476672|emb|CCF44585.1| non-histone chromosomal protein 6 [Colletotrichum higginsianum]
Length = 96
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+AKKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK+++ ++ PY
Sbjct: 17 KRAKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKILGERWKALNEKQRQPY 75
Query: 106 ESKAEKLKSEYGKKMNAYN 124
E+KA K Y + AYN
Sbjct: 76 EAKAATDKKRYEDEKQAYN 94
>gi|443897570|dbj|GAC74910.1| HMG box-containing protein [Pseudozyma antarctica T-34]
Length = 280
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 16 ALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKK 75
AL P+D + ++ A A K++G + +DP KPKRP SAFF FL + R + +
Sbjct: 175 ALSPDD--IKRQNAYIA----SQKKKGIKGTAFLRDPAKPKRPNSAFFEFLNDLRAS-ES 227
Query: 76 ENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYN 124
PN+T S G G +WK M+P +KAPYE +A + +Y + + YN
Sbjct: 228 VIPNITEFSKRG---GERWKQMTPDQKAPYEQRALQALEQYKRDLEVYN 273
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Query: 60 SAFFVFLEE----------FRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
S+F +++ E ++KT K V + + KA G +W + P +KA YE++
Sbjct: 99 SSFLIYMSERVSQLKGEPQYQKTSPKTGAQVVDIVKMAKAVGAEWAQLPPNQKARYEAQH 158
Query: 110 EKLKSEYGKKMNAY 123
E+ K EY + + +
Sbjct: 159 EQEKEEYERALAEW 172
>gi|94966915|ref|NP_001035652.1| high mobility group protein B4 [Bos taurus]
gi|119370723|sp|Q32L34.1|HMGB4_BOVIN RecName: Full=High mobility group protein B4
gi|81673105|gb|AAI09791.1| High-mobility group box 4 [Bos taurus]
gi|296488916|tpg|DAA31029.1| TPA: high mobility group protein B4 [Bos taurus]
Length = 194
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 62/100 (62%), Gaps = 7/100 (7%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ G+R+K+ K+DP+ P+RPPS+F +F ++ K ENP+ + V
Sbjct: 62 ALAKLDKARYQEEMMNYFGRRKKRRKRDPHAPRRPPSSFLLFCQDHYAQLKSENPSWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
V KA+G W + + +K PYE +A L+++Y ++++ Y
Sbjct: 122 Q-VAKASGKMWSAKTDVDKQPYEQRAALLRAKYREELSVY 160
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYES 107
K+D KPK S++ FL +R FK++ PN + KW+S+S EKA YE+
Sbjct: 3 KRDQLKPKANVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEA 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKLDKARYQEEMMNY 78
>gi|346324407|gb|EGX94004.1| nucleosome binding protein [Cordyceps militaris CM01]
Length = 96
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+AKKDPN PKR SA+ F E R ++ENP V+ VGK G +WK++S ++ PY
Sbjct: 17 KRAKKDPNAPKRGLSAYMFFANEQRDNVREENPGVS-FGQVGKILGERWKALSEKQRVPY 75
Query: 106 ESKAEKLKSEYGKKMNAYN 124
E+KA K Y + AYN
Sbjct: 76 EAKAAADKKRYEDEKAAYN 94
>gi|401623234|gb|EJS41340.1| nhp6ap [Saccharomyces arboricola H-6]
Length = 93
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R + ENP++T VGK G KWK+++P EK PYE+KA+
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDIT-FGQVGKKLGEKWKALTPEEKLPYEAKAQ 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|332260744|ref|XP_003279440.1| PREDICTED: uncharacterized protein LOC100604184 [Nomascus
leucogenys]
Length = 414
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAA---GGKWKSMSPAEKA 103
K KKDPN P+RP S FF+F EFR K NP T + G A G WK+++ +EK
Sbjct: 85 KKKKDPNAPQRPLSGFFLFCSEFRPKIKSTNPGKTGIFGFGDVAKKLGEMWKNLNDSEKQ 144
Query: 104 PYESKAEKLKSEYGKKM 120
P+ ++A KLK +Y K +
Sbjct: 145 PHITQAAKLKEKYEKDV 161
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK DP KPK SA+ F++ R+ KK+NP V + K +WK++S +K+ +
Sbjct: 2 AKGDPTKPKGKMSAYAFFVQTCREEHKKKNPKVPVNFAEFSKKCSERWKTISEKKKSEFN 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y +K+ Y
Sbjct: 62 ELAKADKVHYDQKIKDY 78
>gi|28279681|gb|AAH45917.1| High-mobility group box 1 [Danio rerio]
gi|182891806|gb|AAI65307.1| Hmgb1 protein [Danio rerio]
Length = 205
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K+E P ++ + V K G W +S EK PY
Sbjct: 85 KKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGLS-IGDVAKRLGEMWNKISSEEKQPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKAAKLKEKYEKDIAAYRSK 164
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P T S K +WK+MS EK +E
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 AKLDKARYEREMKNY 77
>gi|42476233|ref|NP_955849.2| high mobility group protein B1 [Danio rerio]
gi|37681827|gb|AAQ97791.1| high-mobility group box 1 [Danio rerio]
gi|45595607|gb|AAH67193.1| High-mobility group box 1 [Danio rerio]
Length = 205
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K+E P ++ + V K G W +S EK PY
Sbjct: 85 KKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGLS-IGDVAKRLGEMWNKISSEEKQPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKAAKLKEKYEKDIAAYRSK 164
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P T S K +WK+MS EK +E
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 AKLDKARYEREMKNY 77
>gi|402875874|ref|XP_003901718.1| PREDICTED: high mobility group protein B2-like, partial [Papio
anubis]
Length = 248
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA K
Sbjct: 127 PNAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSQQSAKDKQPYEQKAAK 185
Query: 112 LKSEYGKKMNAYNKK 126
LK +Y K + AY K
Sbjct: 186 LKEKYEKDIAAYRAK 200
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVT-AVSAVGKAAGGKWKSMSPAEKAPYE 106
K DPNKP+ S++ F++ R+ K+++P+ + + K +WK+MS EK+ +E
Sbjct: 37 GKGDPNKPRGKMSSYAFFVQTCREEHKEKHPDSSVGFAEFSKKCSERWKTMSAKEKSKFE 96
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 97 GMAKSGKVRYDREMKNY 113
>gi|384246550|gb|EIE20040.1| hypothetical protein COCSUDRAFT_83556 [Coccomyxa subellipsoidea
C-169]
Length = 140
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
++AKK + P+RP SA+ F+ EFR+ +K ++P V VS VG AAG W+S++P +KA Y
Sbjct: 11 RRAKKPKDAPRRPKSAYMFFMAEFREKWKVDHPEVNRVSDVGVAAGEAWRSLTPEQKAVY 70
Query: 106 ESKAEKLKSEYGKKMNAY 123
E ++ K+ Y ++ Y
Sbjct: 71 EEQSVGSKATYAAEIAEY 88
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 30 ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV 80
A+A KRQ RE P + +RP SA+F FL FR FK++NP
Sbjct: 89 ASAHPKPPKKRQRSRE------PGQLRRPTSAYFFFLNTFRDAFKEDNPGT 133
>gi|334348387|ref|XP_003342057.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Monodelphis domestica]
Length = 208
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KD N PK PPS FF+F EFR K NP ++ + V K G W ++S EK PY +KA
Sbjct: 88 KDSNAPKHPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLSDNEKQPYNNKA 146
Query: 110 EKLKSEYGKKMNAYNKKQV 128
KLK +Y K + A NK ++
Sbjct: 147 AKLKEKYEKDV-ADNKSKI 164
>gi|3551257|dbj|BAA32827.1| 98b [Daucus carota]
Length = 502
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
P KPK P SAFF+F+ E R E NV V GK G +WK+M+ EKAPYE A+K
Sbjct: 287 PLKPKHPVSAFFLFMNERRADLVAEKKNVLEV---GKITGEEWKNMTEKEKAPYEEMAKK 343
Query: 112 LKSEYGKKMNAYNKK 126
K++Y ++M Y KK
Sbjct: 344 NKNQYLQQMEVYKKK 358
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 14 QEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKK---DPNKPKRPPSAFFVFLEEFR 70
QEA++ + K+K T L +K + ++++K +K DPNKPKRP S+F +F +E R
Sbjct: 379 QEAMQ-----LLKKKEKTENLIKKTKEERQKKQKGEKKIVDPNKPKRPASSFLLFSKEAR 433
Query: 71 KTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
KT +E P + S + KWK +S EK + KA Y K+M YNK
Sbjct: 434 KTISEERPGINN-STLNALISVKWKEISHEEKQLWNEKAAGAMEAYKKEMEEYNK 487
>gi|6435676|pdb|1CG7|A Chain A, Hmg Protein Nhp6a From Saccharomyces Cerevisiae
Length = 93
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R + ENP++T VGK G KWK+++P EK PYE+KA+
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDIT-FGQVGKKLGEKWKALTPEEKQPYEAKAQ 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|45382755|ref|NP_990817.1| high mobility group protein B2 [Gallus gallus]
gi|123373|sp|P26584.2|HMGB2_CHICK RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|211927|gb|AAA48818.1| non-histone chromosomal protein [Gallus gallus]
Length = 207
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R K ++P ++ + K G W +K PYE KA
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS-IGDTAKKLGEMWSEQLAKDKQPYEQKAA 149
Query: 111 KLKSEYGKKMNAYNKKQVTN 130
KLK +Y K + AY K ++
Sbjct: 150 KLKEKYEKDIAAYRAKSKSD 169
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + + +WK+MS EK +E
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEE 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKGDKARYDREMKNY 78
>gi|157822723|ref|NP_001102933.1| high mobility group protein B4 [Rattus norvegicus]
gi|149023997|gb|EDL80494.1| rCG31445 [Rattus norvegicus]
Length = 181
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 9/101 (8%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVF-LEEFRKTFKKENPNVTA 82
A AKLD ++ GKR K+ K+DP P++PPS+F +F L+ F K K+ENPN T
Sbjct: 62 AIAKLDKARYQEEMMNYVGKRRKRRKRDPLAPRKPPSSFLLFSLDHFAK-LKQENPNWTV 120
Query: 83 VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
V V KAAG W ++ +K PYE KA ++++Y ++ AY
Sbjct: 121 VQ-VAKAAGKMWSMITDVDKRPYEQKAAIMRAKYFQEREAY 160
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
+PK S++ F+ FR FK++ PN + + KW+S+S EKA +E+ A+
Sbjct: 8 RPKVNVSSYIHFMINFRNKFKEQQPNTYLTFNEFSRRCSEKWRSISKNEKAKFEAIAKLD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|170784871|ref|NP_001116308.1| wu:fk52f12 [Danio rerio]
Length = 213
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR KK KDPN PKRPPS FF+F E R K + P++ + V K G W ++ A
Sbjct: 81 GKRGKK--KDPNAPKRPPSGFFLFCSEHRPQIKAQYPSL-GIGDVAKKLGEMWNGLTDAN 137
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKK 126
K P+ KA KLK +Y K + Y K
Sbjct: 138 KQPFLMKANKLKDKYQKDVADYKTK 162
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYE 106
AK DP KPK SA+ F++ R+ KK++P + + S K G+WK+M+ EK+ +E
Sbjct: 2 AKGDPRKPKGKMSAYAYFVQTCREEHKKKSPEIPVSFSEFSKRCSGRWKAMTDKEKSRFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 62 DMAKQDKVRYDQEMMHY 78
>gi|302652822|ref|XP_003018251.1| hypothetical protein TRV_07738 [Trichophyton verrucosum HKI 0517]
gi|291181876|gb|EFE37606.1| hypothetical protein TRV_07738 [Trichophyton verrucosum HKI 0517]
Length = 132
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ +F E R ++ENPN+T VGK G +WK++S ++ PYE KA
Sbjct: 60 DPNAPKRGLSAYMIFANEQRAAVREENPNIT-FGQVGKVLGERWKALSDKQRVPYEEKAA 118
Query: 111 KLKSEYGKKMNAYN 124
K Y + AYN
Sbjct: 119 TDKQRYEDEKAAYN 132
>gi|406862701|gb|EKD15750.1| nucleosome binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 102
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R +K KKDPN PKR SA+ F E R+ ++ENP +T VGK G +WK+++ ++
Sbjct: 14 RTEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGIT-FGQVGKVLGERWKALNDKQRT 72
Query: 104 PYESKAEKLKSEYGKKMNAYN 124
PYE+KA + K Y + +YN
Sbjct: 73 PYEAKAAQDKKRYEDEKASYN 93
>gi|444518919|gb|ELV12461.1| High mobility group protein B3 [Tupaia chinensis]
Length = 185
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D G + GK+ K+DPN PKRPPS FF+F EF + NP ++ + V K G W
Sbjct: 77 DYGPAKGGKK----KRDPNAPKRPPSGFFLFCSEFCPKIRSNNPGIS-IGDVAKKLGEMW 131
Query: 95 KSMSPAEKAPYESKAEKLKSE 115
+ S +EK PY +KA KLK E
Sbjct: 132 NNKSDSEKQPYNTKATKLKYE 152
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYTFFVQTCREKHKKKNPEVPVKFAEFSKKGSERWKTMSGKEKSKFDEMAKVNKVHYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|171848939|pdb|2YQI|A Chain A, Solution Structure Of The Second Hmg-Box Domain From High
Mobility Group Protein B3
Length = 81
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPS FF+F EFR K NP ++ + V K G W +++ +EK PY +KA KL
Sbjct: 8 NAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYITKAAKL 66
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + Y K
Sbjct: 67 KEKYEKDVADYKSK 80
>gi|71012570|ref|XP_758511.1| hypothetical protein UM02364.1 [Ustilago maydis 521]
gi|46098169|gb|EAK83402.1| hypothetical protein UM02364.1 [Ustilago maydis 521]
Length = 125
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 22 RKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVT 81
R + K A K S + Q KR KAKKDP+ PKRP SA+ F ++ R+ K NP
Sbjct: 22 RAIVKMAKADTKTKSSTSTQ-KRTTKAKKDPDAPKRPLSAYMFFSQDQRERVKNANPEA- 79
Query: 82 AVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
VG+ G KWK MS AEK PY A + K+ + AYNK++
Sbjct: 80 GFGEVGRLLGAKWKEMSEAEKKPYNDMANRDKARAEAEKAAYNKRR 125
>gi|90103305|gb|ABD85497.1| high mobility group box 1-like [Ictalurus punctatus]
Length = 182
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K+E P ++ + V K G W S EK PY
Sbjct: 66 KKRFKDPNAPKRPPSAFFIFCAEYRPKVKEETPGLS-IGDVAKKLGEMWNKTSAEEKQPY 124
Query: 106 ESKAEKLKSEYGKKMNAYNKKQVT 129
E KA KLK +Y K + AY K +V
Sbjct: 125 EKKAAKLKEKYEKDIAAYRKGKVV 148
>gi|156057705|ref|XP_001594776.1| hypothetical protein SS1G_04584 [Sclerotinia sclerotiorum 1980]
gi|154702369|gb|EDO02108.1| hypothetical protein SS1G_04584 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 554
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
G+KR+ +R K D N P+RPPSA+ +F + R+ K N + T ++ K G W++
Sbjct: 101 GAKRKYRRHPKT--DENAPERPPSAYVIFSNKMREDLKGRNLSFTEIA---KLVGENWQN 155
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
+SPAEK PYE A K K Y ++ Y K Q
Sbjct: 156 LSPAEKEPYEQSAYKAKERYNNELAEYKKTQ 186
>gi|291392907|ref|XP_002712835.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 208
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+ K E+P ++ + V K G W + + +K P
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYCPKIKGEHPGLS-IGDVAKKLGEMWNNTAAGDKQPC 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 ERKAAKLKVKYEKGIAAYQAK 165
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ + KK +P+ + S K +WK+MS +K +E
Sbjct: 3 KGDPKKPRGKMSSYTFFVQTCPEKHKKRHPDASVNFSEFSKKCSERWKTMSAKKKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKIY 78
>gi|145541886|ref|XP_001456631.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424443|emb|CAK89234.1| unnamed protein product [Paramecium tetraurelia]
Length = 235
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
EKK ++DPN PK+P + FF+F +++R+ NP + ++ + + AG KW SMS EK P
Sbjct: 41 EKKKERDPNAPKKPLTPFFLFNQKYREKVVDRNPEI-KLTQISQMAGNKWSSMSEQEKKP 99
Query: 105 YESKAEKLKSEYGKKMNAYNKK 126
Y + K +Y +++ YN+K
Sbjct: 100 YVDQYNAAKEKYEQELKDYNEK 121
>gi|118343822|ref|NP_001071733.1| transcription factor protein [Ciona intestinalis]
gi|70569841|dbj|BAE06487.1| transcription factor protein [Ciona intestinalis]
Length = 204
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRP SAFF+F + R K ENP T V + KA G KW + SP K Y + E
Sbjct: 94 DPNAPKRPQSAFFLFCADRRAPLKAENPGWT-VGEIAKALGKKWAAASPDTKKKYAEQGE 152
Query: 111 KLKSEYGKKMNAYNKKQ 127
KS+Y K+M Y +Q
Sbjct: 153 VEKSKYNKEMEKYRSQQ 169
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
KKDPNKP+ + + F++ R+ K+++PN V A + +WK M+ EK +
Sbjct: 4 KKDPNKPRGRMTGYAYFVQTCREEHKRKHPNEQVVFAEFSRKCAKRWKPMTDKEKKTFTD 63
Query: 108 KAEKLKSEYGKKMNAY 123
AEK + Y ++M Y
Sbjct: 64 MAEKDRQRYEREMKDY 79
>gi|367006853|ref|XP_003688157.1| hypothetical protein TPHA_0M01480 [Tetrapisispora phaffii CBS 4417]
gi|357526464|emb|CCE65723.1| hypothetical protein TPHA_0M01480 [Tetrapisispora phaffii CBS 4417]
Length = 93
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
+G + KR + KKDPN PKR SA+ F E R + ENP+V+ +G+ G KW+
Sbjct: 2 AGPREIKKRTHRRKKDPNAPKRAMSAYMFFANETRDIVRAENPDVS-FGQIGRLLGEKWR 60
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYN 124
+++ +K P+E+KA+ K Y + YN
Sbjct: 61 ALTDEDKGPFEAKAQADKKRYESEKELYN 89
>gi|302411796|ref|XP_003003731.1| nucleosome binding protein [Verticillium albo-atrum VaMs.102]
gi|261357636|gb|EEY20064.1| nucleosome binding protein [Verticillium albo-atrum VaMs.102]
gi|346978438|gb|EGY21890.1| nucleosome binding protein [Verticillium dahliae VdLs.17]
Length = 102
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K+ K+AKKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK+++ ++
Sbjct: 13 KKAKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKLLGERWKALNEKQR 71
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PYE+KA K Y + AYN
Sbjct: 72 GPYEAKAVADKKRYEDEKAAYN 93
>gi|12838247|dbj|BAB24141.1| unnamed protein product [Mus musculus]
Length = 181
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP P++PPS+F +F + K+ENP+ T V V KAAG W + AEK PYE KA
Sbjct: 89 DPKAPRKPPSSFLLFSRDHYAMLKQENPDWTVVQ-VAKAAGKMWSTTDEAEKKPYEQKAA 147
Query: 111 KLKSEYGKKMNAY 123
++++Y ++ AY
Sbjct: 148 LMRAKYFEEQEAY 160
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYES 107
+KD +PK S++ F+ FR FK++ PN + KW+S+S EKA YE+
Sbjct: 3 EKDQLRPKVNVSSYIHFMLNFRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEA 62
Query: 108 KAEKLKSEYGKKMNAY 123
AE K+ Y ++M Y
Sbjct: 63 LAEHDKARYQQEMMNY 78
>gi|406866133|gb|EKD19173.1| HMG box protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 525
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
Query: 20 NDRKVGKRKAATAKLDSGSKRQG-------KREKKAKKDPNKPKRPPSAFFVFLEEFRKT 72
+DR V ++K K++ G + G K + K D N P+RPPSA+ +F + R+
Sbjct: 77 DDRNVEEQKTPGVKVEGGKEANGCAPGVKRKYRRHPKPDDNAPERPPSAYVIFSNKMRED 136
Query: 73 FKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
K N + T ++ K G W+++SP+EK PYE +A K Y ++ Y K +
Sbjct: 137 LKGRNLSFTEIA---KLVGENWQNLSPSEKDPYEQQASAAKERYNNELAEYKKTE 188
>gi|357517687|ref|XP_003629132.1| HMG1/2-like protein [Medicago truncatula]
gi|355523154|gb|AET03608.1| HMG1/2-like protein [Medicago truncatula]
Length = 75
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%), Gaps = 5/66 (7%)
Query: 26 KRKAATAKLDSGSKRQG-----KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV 80
K KA + D+ KR+G K+ KKA KDPNKPKRPPSAFFVF+ +FR+ +KK++PN
Sbjct: 3 KVKADSKPADNRLKRKGAGAGRKQTKKAAKDPNKPKRPPSAFFVFMSDFREQYKKDHPNN 62
Query: 81 TAVSAV 86
+V+A+
Sbjct: 63 KSVAAL 68
>gi|194666188|ref|XP_875720.3| PREDICTED: high mobility group protein B2 [Bos taurus]
gi|297473608|ref|XP_002686711.1| PREDICTED: high mobility group protein B2 [Bos taurus]
gi|296488702|tpg|DAA30815.1| TPA: high-mobility group box 2-like [Bos taurus]
Length = 283
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 167 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 225
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 226 KEKYEKDIAAYRAK 239
>gi|440631791|gb|ELR01710.1| non-histone chromosomal protein 6 [Geomyces destructans 20631-21]
Length = 101
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R +K KKDPN PKR SA+ F +E R ++ENP ++ VGK G +WK+++ ++
Sbjct: 14 RGEKKKKDPNAPKRGLSAYMFFAQEQRDNVREENPGIS-FGQVGKVLGERWKALNDKQRT 72
Query: 104 PYESKAEKLKSEYGKKMNAYN 124
PYE+KA++ K Y + +YN
Sbjct: 73 PYETKAQEDKKRYEDEKASYN 93
>gi|410256408|gb|JAA16171.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKRPPS FF+F E R K NP ++ V V K G W +++ +EK PY +KA
Sbjct: 89 DPSAPKRPPSGFFLFSSEIRPKIKSTNPGIS-VGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 73
Query: 119 KMNAY 123
+M Y
Sbjct: 74 EMKDY 78
>gi|392877702|gb|AFM87683.1| high mobility group box 3 [Callorhinchus milii]
Length = 203
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKRPPS FF+F + R K +P +T + V K G W + EK PY
Sbjct: 85 KKKKDPNAPKRPPSGFFLFCSDHRPKIKAGSPGLT-IGDVAKKLGELWNGCTDEEKKPYN 143
Query: 107 SKAEKLKSEYGKKMNAYNKK 126
+KA KLK +Y K + Y K
Sbjct: 144 AKAAKLKEKYEKDVADYRTK 163
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK+DP KP+ S++ F++ R+ KK+NP+V S K +WK+MS EK+ +E
Sbjct: 2 AKRDPKKPRGKMSSYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKTMSGKEKSKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 DLAKVDKVRYDREMKTY 78
>gi|47227840|emb|CAG09003.1| unnamed protein product [Tetraodon nigroviridis]
Length = 199
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K ENP +T + K G W S + +K PY
Sbjct: 85 KKRFKDPNAPKRPPSAFFLFCAEFRPKVKSENPGLT-IGDTAKKLGEMWNSKTAEDKQPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKAAKLKEKYDKDIVAYRTK 164
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P+ + + K +WK+MSP EK +E
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|351702997|gb|EHB05916.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 204
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKR PS FF+F E+R K E+P ++ V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRAPSTFFLFCSEYRPKIKGEHPGLS-TGDVAKKLGEMWNNTAAGDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA +LK +Y K + AY K
Sbjct: 145 EKKAAELKEKYEKDIAAYRAK 165
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++ + + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVKFSEYSKKCSERWKTMSAKEKGTFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y +KM Y
Sbjct: 63 MAKVDKARYERKMKTY 78
>gi|255715687|ref|XP_002554125.1| KLTH0E14850p [Lachancea thermotolerans]
gi|238935507|emb|CAR23688.1| KLTH0E14850p [Lachancea thermotolerans CBS 6340]
Length = 93
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR + KKDPN PKR SA+ F E R + ENP VT VG+ G KWK+++ EK
Sbjct: 9 KRTTRRKKDPNAPKRALSAYMFFANENRDIVRAENPGVT-FGQVGRLLGDKWKALTDEEK 67
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
PYE+K K Y + YN
Sbjct: 68 QPYEAKHAADKKRYESEKELYN 89
>gi|444730527|gb|ELW70909.1| High mobility group protein B1 [Tupaia chinensis]
Length = 238
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPP AFF+F E+R + E+P ++ + K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPLAFFLFCSEYRPKIEGEHPGLS-IGDTAKKLGELWNNTAANDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E +A KLK +Y K + AY K
Sbjct: 145 EKEAAKLKEKYEKDIAAYRAK 165
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ + KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCWEEHKKKHPDASVNFSEFSKKCSERWKAMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKVDKTRYEREMKTY 78
>gi|70999478|ref|XP_754458.1| nucleosome binding protein (Nhp6a) [Aspergillus fumigatus Af293]
gi|74674416|sp|Q4WY33.1|NHP6_ASPFU RecName: Full=Non-histone chromosomal protein 6
gi|66852095|gb|EAL92420.1| nucleosome binding protein (Nhp6a), putative [Aspergillus fumigatus
Af293]
gi|159127475|gb|EDP52590.1| nucleosome binding protein (Nhp6a), putative [Aspergillus fumigatus
A1163]
Length = 104
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
+ ++ + KR ++ KKDPN PKR SA+ F E R ++ENP ++ VGK G +WK
Sbjct: 6 TSTRTKTKRVERKKKDPNAPKRGLSAYMFFANENRDKVREENPGIS-FGQVGKMLGERWK 64
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
++S +E+ PYE KA K Y + +YN Q
Sbjct: 65 ALSDSERRPYEEKAAADKKRYEDEKASYNAAQ 96
>gi|213515010|ref|NP_001133971.1| High mobility group protein B3 [Salmo salar]
gi|209156012|gb|ACI34238.1| High mobility group protein B3 [Salmo salar]
gi|223648118|gb|ACN10817.1| High mobility group protein B3 [Salmo salar]
Length = 206
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKRP S FF+F + R K ++P++ + V K G +W +++ A K PY K
Sbjct: 87 KKDPNAPKRPSSGFFIFCADHRPKIKAQHPSL-GIGDVAKKLGEQWNNLTDATKQPYLIK 145
Query: 109 AEKLKSEYGKKMNAYNKKQVTNLVP 133
A KLK +Y K + Y + +VP
Sbjct: 146 ANKLKDKYQKDVADYKSGKGKVVVP 170
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK P KPK S++ F++ R+ KK+ P + + K G+WK+MS EK ++
Sbjct: 2 AKGTPGKPKGKMSSYAYFVQTCREEHKKKTPEIPVNFAEFSKKCSGRWKTMSGKEKGKFD 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A++ K Y +M +
Sbjct: 62 DMAKQDKVRYDNEMMHF 78
>gi|427794389|gb|JAA62646.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 604
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K +D NKPKRP +AF +F+ +FRK + P V+A+ K G +W+SMS +K PY
Sbjct: 250 KPARDANKPKRPGTAFMLFMGDFRKEMAGKEPE-GGVAALAKLGGERWRSMSEEDKRPYV 308
Query: 107 SKAEKLKSEYGKKMNAYNKKQVT 129
+ + K +Y + M Y +KQ T
Sbjct: 309 ERQNEEKMKYEQNMEEYRRKQQT 331
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKS 114
PKR +A+ F + +R+ KK + + GK GKW +MS +K P+ S A + +
Sbjct: 181 PKRATTAYITFTQWYREEMKKSGRQIPRIGDFGKECAGKWNTMSDEDKQPFLSAAARDRE 240
Query: 115 EYGKKMNAY 123
Y ++M Y
Sbjct: 241 RYKREMAVY 249
>gi|427793709|gb|JAA62306.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 640
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K +D NKPKRP +AF +F+ +FRK + P V+A+ K G +W+SMS +K PY
Sbjct: 286 KPARDANKPKRPGTAFMLFMGDFRKEMAGKEPE-GGVAALAKLGGERWRSMSEEDKRPYV 344
Query: 107 SKAEKLKSEYGKKMNAYNKKQVT 129
+ + K +Y + M Y +KQ T
Sbjct: 345 ERQNEEKMKYEQNMEEYRRKQQT 367
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKS 114
PKR +A+ F + +R+ KK + + GK GKW +MS +K P+ S A + +
Sbjct: 217 PKRATTAYITFTQWYREEMKKSGRQIPRIGDFGKECAGKWNTMSDEDKQPFLSAAARDRE 276
Query: 115 EYGKKMNAY 123
Y ++M Y
Sbjct: 277 RYKREMAVY 285
>gi|332847763|ref|XP_003315517.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan troglodytes]
gi|397485725|ref|XP_003813991.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan paniscus]
Length = 207
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 28 KAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVG 87
KA D K G + KKDPN PKRPPS FF+F EF K NP + + V
Sbjct: 65 KADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGI-PIGDVA 123
Query: 88 KAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
K WK+++ +EK PY ++A KLK +Y K +
Sbjct: 124 KKLSEMWKNLNDSEKQPYITQAAKLKEKYEKDV 156
>gi|410961840|ref|XP_003987486.1| PREDICTED: LOW QUALITY PROTEIN: TOX high mobility group box family
member 4 [Felis catus]
Length = 623
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 39 KRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
K+Q +K+ KKDPN+P++P SA+ +F + + K +NPN T V K W S+
Sbjct: 211 KKQKAPKKRXKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLG 269
Query: 99 PAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
+K Y+ K E K EY K + AY Q
Sbjct: 270 EEQKQVYKRKTEAAKKEYLKALAAYKDNQ 298
>gi|366996751|ref|XP_003678138.1| hypothetical protein NCAS_0I01260 [Naumovozyma castellii CBS 4309]
gi|342304009|emb|CCC71794.1| hypothetical protein NCAS_0I01260 [Naumovozyma castellii CBS 4309]
Length = 94
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
+K KR + KKDPN PKR S++ F R + ENP+VT VGK G +WK+
Sbjct: 4 STKEPKKRTVRRKKDPNAPKRALSSYMFFANATRDIVRSENPDVT-FGQVGKLLGERWKA 62
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYN 124
++P EK P+E KA++ K Y + Y+
Sbjct: 63 LTPEEKEPFELKAKQDKERYASEKALYD 90
>gi|170585494|ref|XP_001897518.1| HMG box family protein [Brugia malayi]
gi|158595065|gb|EDP33640.1| HMG box family protein [Brugia malayi]
Length = 364
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 30 ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
T ++ S + R+ R+K+ KKDPN+P++P SA+ +F + + T K +PN + V K
Sbjct: 79 TTNQVTSRTSRRTIRKKRPKKDPNEPQKPVSAYALFFRDTQATIKGRSPNA-SFGEVSKI 137
Query: 90 AGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQVT 129
W S+ K+ Y+ + E K +Y KK+ AY +Q++
Sbjct: 138 VASMWDSLDYHAKSLYKQRTEMAKKDYLKKLAAYRAQQIS 177
>gi|156083745|ref|XP_001609356.1| high mobility group protein-like protein NHP1 [Babesia bovis T2Bo]
gi|730136|sp|P40632.1|NHP1_BABBO RecName: Full=High mobility group protein homolog NHP1
gi|344189439|pdb|2LHJ|A Chain A, Nmr Structure Of The High Mobility Group Protein-Like
Protein Nhp1 From Babesia Bovis T2bo (Baboa.00841.A)
gi|155890|gb|AAA27799.1| non-histone protein [Babesia bovis]
gi|154796607|gb|EDO05788.1| high mobility group protein-like protein NHP1 [Babesia bovis]
Length = 97
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 37 GSKRQG-KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVT-AVSAVGKAAGGKW 94
S R G +R +KAKKDPN PKR S++ F +E R ENP + V+A+GK G W
Sbjct: 4 ASDRTGVRRPRKAKKDPNAPKRALSSYMFFAKEKRVEIIAENPEIAKDVAAIGKMIGAAW 63
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQV 128
++S EK PYE +++ + Y ++ Y +++V
Sbjct: 64 NALSDEEKKPYERMSDEDRVRYEREKAEYAQRKV 97
>gi|344305949|ref|XP_003421652.1| PREDICTED: TOX high mobility group box family member 4-like
[Loxodonta africana]
Length = 619
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 39 KRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
K+Q +K+ KKDPN+P++P SA+ +F + + K +NPN T V K W S+
Sbjct: 207 KKQKAPKKRRKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLG 265
Query: 99 PAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
+K Y+ K E K EY K + AY Q
Sbjct: 266 EEQKQVYKRKTEAAKKEYLKALAAYKDNQ 294
>gi|109076196|ref|XP_001085665.1| PREDICTED: high mobility group protein B2-like [Macaca mulatta]
Length = 321
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 207 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 265
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 266 KEKYEKDIAAYRAK 279
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPY 105
+++ DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +
Sbjct: 115 RSRGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 174
Query: 106 ESKAEKLKSEYGKKMNAY 123
E A+ K+ Y ++M Y
Sbjct: 175 EDMAKSDKARYDREMKNY 192
>gi|226479042|emb|CAX73016.1| structure specific recognition protein 1 [Schistosoma japonicum]
Length = 679
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
SKRQ K+++K K DPN P RP SA+F++ E R+ K +V+ V KA G W++M
Sbjct: 579 SKRQTKKQEKPK-DPNAPTRPLSAYFLWFNENREKIAKSLSGQNSVAEVAKAGGELWRNM 637
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAY 123
K+ Y+S+ ++LK +Y + + Y
Sbjct: 638 DSETKSTYQSRVDELKKKYQEDLRVY 663
>gi|395753165|ref|XP_003779555.1| PREDICTED: high mobility group protein B1-like [Pongo abelii]
Length = 215
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KD N PKR PSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDLNAPKRTPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAVKLKEKYEKDIAAYRAK 165
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ ++ KK++P+ + S K +WK++S EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCQEEKKKKHPDASVNFSEFSKTCSERWKTISAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
+ K+ Y ++M Y
Sbjct: 63 MVKADKARYEREMKTY 78
>gi|226443200|ref|NP_001140081.1| High mobility group-T protein [Salmo salar]
gi|223649418|gb|ACN11467.1| High mobility group-T protein [Salmo salar]
Length = 345
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P ++ + V K G KW +++ +K PY
Sbjct: 227 KKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS-IGDVAKKLGEKWNNLTAEDKVPY 285
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 286 EKKAAKLKEKYEKDITAYRNK 306
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 145 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 204
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 205 AKLDKVRYEREMRSY 219
>gi|387914026|gb|AFK10622.1| high mobility group box 3 [Callorhinchus milii]
Length = 210
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKRPPS FF+F + R K +P +T + V K G W + EK PY
Sbjct: 92 KKKKDPNAPKRPPSGFFLFCSDHRPKIKAGSPGLT-IGDVAKKLGELWNGCTDEEKKPYN 150
Query: 107 SKAEKLKSEYGKKMNAY 123
+KA KLK +Y K + Y
Sbjct: 151 AKAAKLKEKYEKDVADY 167
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAP 104
K AK+DP KP+ S++ F++ R+ KK+NP+V S K +WK+MS EK+
Sbjct: 7 KMAKRDPKKPRGKMSSYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKTMSGKEKSK 66
Query: 105 YESKAEKLKSEYGKKMNAY 123
+E A+ K Y ++M Y
Sbjct: 67 FEDLAKVDKVRYDREMKTY 85
>gi|403295709|ref|XP_003938773.1| PREDICTED: high mobility group protein B2 [Saimiri boliviensis
boliviensis]
Length = 158
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 42 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 100
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 101 KEKYEKDIAAYRAK 114
>gi|118488333|gb|ABK95985.1| unknown [Populus trichocarpa]
Length = 232
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPK P SAFF+F E R EN NV V K AG +WK+M+ +K PYE A+
Sbjct: 29 DPLKPKHPLSAFFLFSNERRAALLAENKNVL---EVAKIAGEEWKNMTEKQKRPYEEIAK 85
Query: 111 KLKSEYGKKMNAY 123
K K +Y ++M AY
Sbjct: 86 KNKEKYTQEMEAY 98
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPK+P S+F +F +E RK+ E+P + + S + KWK + EK + KA
Sbjct: 154 DPNKPKKPASSFLLFSKETRKSLVHEHPGINS-STLTAMISVKWKELIQEEKQIWNCKAA 212
Query: 111 KLKSEYGKKMNAYNK 125
+ Y K++ Y+K
Sbjct: 213 EAMEAYKKELEEYHK 227
>gi|357165293|ref|XP_003580334.1| PREDICTED: HMG1/2-like protein-like [Brachypodium distachyon]
Length = 135
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D+ K GKR KKA KPKR P+ FF FL EFR + +++P V+AV KAAG KW
Sbjct: 8 DASFKASGKR-KKATGGVAKPKRAPTPFFAFLAEFRPQYMEKHPEAKGVAAVTKAAGEKW 66
Query: 95 KSMSPAEKAPYESKAEKLK 113
+SMS EKA Y K ++++
Sbjct: 67 RSMSDEEKAKYGGKKQEVQ 85
>gi|328769557|gb|EGF79601.1| hypothetical protein BATDEDRAFT_89692 [Batrachochytrium
dendrobatidis JAM81]
Length = 99
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
++G +KK++KDP+ PKRP SAF +F +E R ++ENP+ + +GK G W+ ++
Sbjct: 14 KRGDDKKKSRKDPDAPKRPLSAFMIFSKENRPRIREENPDAS-FGDLGKLLGAAWRELND 72
Query: 100 AEKAPYESKAEKLKSEYGKKMNAY 123
+K Y KA++ K Y ++M+ Y
Sbjct: 73 KDKQVYTDKADEDKGRYEREMSTY 96
>gi|354484377|ref|XP_003504365.1| PREDICTED: high mobility group protein B2-like [Cricetulus griseus]
Length = 264
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 147 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 205
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 206 KEKYEKDIAAYRAK 219
>gi|344235655|gb|EGV91758.1| High mobility group protein B2 [Cricetulus griseus]
Length = 159
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 42 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 100
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 101 KEKYEKDIAAYRAK 114
>gi|388857490|emb|CCF48846.1| uncharacterized protein [Ustilago hordei]
Length = 292
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 10/109 (9%)
Query: 16 ALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKK 75
AL P+D + ++ A A K++G + +DP KPKRP SAFF FL + R +
Sbjct: 187 ALSPDD--IKRQNAYIA----SQKKKGIKGTAFLRDPAKPKRPNSAFFEFLNDLRAR-ET 239
Query: 76 ENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYN 124
PN+T S G G +WK M+P +KAPYE +A +Y + + YN
Sbjct: 240 VIPNITEFSKRG---GERWKQMAPEQKAPYEQRALHALEQYKRDLEIYN 285
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Query: 60 SAFFVFLEE----------FRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
S+F +++ E ++KT K V + + KA G +W ++P KA YE++
Sbjct: 111 SSFLIYMSERVAQLKGEPLYQKTSPKTGAQVVDIVKMAKAVGAEWAQLAPQLKARYEAQH 170
Query: 110 EKLKSEYGKKMNAY 123
E+ K +Y + + +
Sbjct: 171 EQEKEQYERALAEW 184
>gi|255537735|ref|XP_002509934.1| transcription factor, putative [Ricinus communis]
gi|223549833|gb|EEF51321.1| transcription factor, putative [Ricinus communis]
Length = 514
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPK+P SAFF+F E R + EN NV V K AG +WK+M+ +K PYE A+
Sbjct: 307 DPLKPKQPMSAFFLFSNERRASLLAENKNV---REVAKIAGEQWKNMTEEQKGPYEEMAK 363
Query: 111 KLKSEYGKKMNAYNKK 126
+ K Y ++M AY +K
Sbjct: 364 RNKLRYMQEMEAYKQK 379
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 14 QEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTF 73
QEAL+ + K+K T + +K +++K+ DPNKPK+P S+F +F +E RK
Sbjct: 400 QEALQ-----LLKKKEKTDNMIKKTKENRQKKKQQNVDPNKPKKPASSFLIFSKEARKNL 454
Query: 74 KKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQVT 129
+E P V S + KWK +S E+ + +KA + Y K+M YNK T
Sbjct: 455 AQERP-VINNSTLNALISVKWKELSEEERQIWNAKAAEAMEIYKKEMEEYNKTAAT 509
Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RP + ++ ++ K ENPN + G KWK++S +K PYE K + K Y
Sbjct: 197 RPSPPYILWCKDQWNEVKNENPNAE-FKEISNILGAKWKNVSTEDKKPYEDKYQAEKEVY 255
Query: 117 GKKMN 121
+ +N
Sbjct: 256 LQVVN 260
>gi|118344004|ref|NP_001071827.1| FACT complex subunit SSRP1 [Ciona intestinalis]
gi|110287972|sp|Q4H2R2.1|SSRP1_CIOIN RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Structure-specific recognition protein 1
gi|70571284|dbj|BAE06715.1| transcription factor protein [Ciona intestinalis]
Length = 704
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+ KKDPN PKRP SA+F++L E R FK EN + +V+ + K AG +WK + P EK +
Sbjct: 545 KRKKKDPNAPKRPQSAYFLWLNENRGRFKAENKGI-SVTELTKLAGKEWKKIDPDEKQKF 603
Query: 106 ESKAEKLKSEYGKKMNAY 123
E +K K ++ M Y
Sbjct: 604 ERMYQKSKVKFDAAMKEY 621
>gi|213513415|ref|NP_001133101.1| high mobility group protein B1 [Salmo salar]
gi|197631937|gb|ACH70692.1| high-mobility group box 1 [Salmo salar]
Length = 203
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P ++ + V K G KW +++ +K PY
Sbjct: 85 KKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS-IGDVAKKLGEKWNNLTAEDKVPY 143
Query: 106 ESKAEKLKSEYGKKMNAY-NKKQVTNLVP 133
E KA KLK +Y K + AY NK +V VP
Sbjct: 144 EKKAAKLKEKYEKDITAYRNKGKVPVSVP 172
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +W++MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|56756695|gb|AAW26520.1| SJCHGC07008 protein [Schistosoma japonicum]
Length = 213
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
SKRQ K++KK K DPN P RP SA+F++ E R+ K +V+ V KA G W++
Sbjct: 112 SSKRQTKKQKKPK-DPNAPTRPLSAYFLWFNENREKIAKSLSGQNSVAEVAKAGGELWRN 170
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAY 123
M K+ Y+S+ ++LK +Y + + Y
Sbjct: 171 MDSETKSTYQSRVDELKKKYQEDLRVY 197
>gi|410081503|ref|XP_003958331.1| hypothetical protein KAFR_0G01620 [Kazachstania africana CBS 2517]
gi|372464919|emb|CCF59196.1| hypothetical protein KAFR_0G01620 [Kazachstania africana CBS 2517]
Length = 95
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
+K KR ++ KKDPN PKR SA+ F E R + ENP+VT +G+ G +WK++
Sbjct: 4 TKDTKKRTQRRKKDPNAPKRALSAYMFFANENRDIVRSENPDVT-FGQIGRILGERWKAL 62
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNKKQVT 129
+ +K PYE+KA K Y + Y T
Sbjct: 63 NAEDKEPYEAKAAADKKRYESEKELYMATHAT 94
>gi|344248925|gb|EGW05029.1| hypothetical protein I79_015964 [Cricetulus griseus]
Length = 164
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAF +F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 36 KKKFKDPNAPKRPPSAF-LFCSEYRPKTKGEHPGLS-LGDVAKKLGEMWNNTAAGDKQPY 93
Query: 106 ESKAEKLKSEYGKKMNAY 123
E KA KLK +Y K + AY
Sbjct: 94 EKKAAKLKEQYEKDIAAY 111
>gi|291413747|ref|XP_002723128.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 117 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 175
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 176 KEKYEKDIAAYRAK 189
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK +E
Sbjct: 27 KGDPNKPRGKMSSYAFFVQMCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKPKFED 86
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 87 MAKSDKARYDREMKNY 102
>gi|149060359|gb|EDM11073.1| rCG63620 [Rattus norvegicus]
Length = 198
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 81 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 139
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 140 KEKYEKDIAAYRAK 153
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E A+ K+ Y +
Sbjct: 2 SSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSDKARYDR 61
Query: 119 KMNAY 123
+M Y
Sbjct: 62 EMKNY 66
>gi|426251515|ref|XP_004019467.1| PREDICTED: high mobility group protein B2-like [Ovis aries]
Length = 209
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|426230076|ref|XP_004009107.1| PREDICTED: high mobility group protein B2-like [Ovis aries]
Length = 209
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|194208319|ref|XP_001498869.2| PREDICTED: high mobility group protein B2-like [Equus caballus]
Length = 210
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNK + S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKARGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|444732758|gb|ELW73033.1| High mobility group protein B2 [Tupaia chinensis]
Length = 234
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 127 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 185
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 186 KEKYEKDIAAYRAK 199
>gi|427793707|gb|JAA62305.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 529
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K +D NKPKRP +AF +F+ +FRK + P V+A+ K G +W+SMS +K PY
Sbjct: 271 KPARDANKPKRPGTAFMLFMGDFRKEMAGKEPE-GGVAALAKLGGERWRSMSEEDKRPYV 329
Query: 107 SKAEKLKSEYGKKMNAYNKKQVT 129
+ + K +Y + M Y +KQ T
Sbjct: 330 ERQNEEKMKYEQNMEEYRRKQQT 352
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKS 114
PKR +A+ F + +R+ KK + + GK GKW +MS +K P+ S A + +
Sbjct: 202 PKRATTAYITFTQWYREEMKKSGRQIPRIGDFGKECAGKWNTMSDEDKQPFLSAAARDRE 261
Query: 115 EYGKKMNAY 123
Y ++M Y
Sbjct: 262 RYKREMAVY 270
>gi|8393536|ref|NP_058883.1| high mobility group protein B2 [Rattus norvegicus]
gi|293340790|ref|XP_001063065.2| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|293352163|ref|XP_573272.3| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|1708260|sp|P52925.2|HMGB2_RAT RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|1304193|dbj|BAA12350.1| HMG2 [Rattus norvegicus]
gi|51259308|gb|AAH78866.1| Hmgb2 protein [Rattus norvegicus]
gi|58476482|gb|AAH89854.1| Hmgb2 protein [Rattus norvegicus]
gi|77567606|gb|AAI07456.1| Hmgb2 protein [Rattus norvegicus]
gi|149032266|gb|EDL87172.1| rCG59188 [Rattus norvegicus]
Length = 210
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|270005614|gb|EFA02062.1| hypothetical protein TcasGA2_TC007692 [Tribolium castaneum]
Length = 557
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
G K++GK+ K+ K DPN PKR SAFF F + R K +NP V + K G +W
Sbjct: 433 GEKQRGKKRKQVK-DPNAPKRSLSAFFWFSNDERAKVKSQNPEF-GVGDIAKELGRRWAD 490
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQV 128
P K+ YE+ A+K K+ Y K+M AY KK +
Sbjct: 491 AEPEMKSKYEALADKDKARYEKEMTAYKKKNM 522
>gi|427780835|gb|JAA55869.1| Putative dorsal switch protein 1 [Rhipicephalus pulchellus]
Length = 508
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K +D NKPKRP +AF +F+ +FRK + P V+A+ K G +W+SMS +K PY
Sbjct: 250 KPARDANKPKRPGTAFMLFMGDFRKEMAGKEPE-GGVAALAKLGGERWRSMSEEDKRPYV 308
Query: 107 SKAEKLKSEYGKKMNAYNKKQVT 129
+ + K +Y + M Y +KQ T
Sbjct: 309 ERQNEEKMKYEQNMEEYRRKQQT 331
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKS 114
PKR +A+ F + +R+ KK + + GK GKW +MS +K P+ S A + +
Sbjct: 181 PKRATTAYITFTQWYREEMKKSGRQIPRIGDFGKECAGKWNTMSDEDKQPFLSAAARDRE 240
Query: 115 EYGKKMNAY 123
Y ++M Y
Sbjct: 241 RYKREMAVY 249
>gi|395847762|ref|XP_003796535.1| PREDICTED: high mobility group protein B3-like [Otolemur garnettii]
Length = 255
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 23 KVGKRKAATAKLDSGSKRQGKREKKA--------KKDPNKPKRPPSAFFVFLEEFRKTFK 74
K GK K+ +++ K RE K KKDPN P RPPS F +F EF K
Sbjct: 76 KSGKEKSKFDEMEKADKVCYDREMKDYGLAKGGKKKDPNAPTRPPSGFCLFCSEFHPKIK 135
Query: 75 KENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
NP ++ + V K W ++S +EK PY +KA +L+ +Y K + Y K
Sbjct: 136 STNPGIS-IGDVAKKLSEMWSNLSGSEKQPYITKAAQLREKYEKDVADYKSK 186
>gi|291413749|ref|XP_002723129.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 219
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAY 123
K +Y K + AY
Sbjct: 152 KEKYEKDIAAY 162
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAV--GKAAGGKWKSMSPAEKAPYE 106
K DPNKP+ S++ F++ R+ K+++P+ ++V+ V K +WK+MS E + +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKRKHPD-SSVNFVEFSKKCSERWKTMSAKENSKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|169409528|gb|ACA57879.1| High mobility group protein B3 (predicted) [Callicebus moloch]
Length = 193
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPS FF+F EFR K N ++ + V K G W +++ ++K PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNLGIS-IGDVAKKLGEMWNNLNDSKKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|431918327|gb|ELK17554.1| High mobility group protein B2 [Pteropus alecto]
Length = 209
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|426220609|ref|XP_004004507.1| PREDICTED: high mobility group protein B2 [Ovis aries]
Length = 205
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|73993609|ref|XP_543194.2| PREDICTED: high mobility group protein B2 isoform 1 [Canis lupus
familiaris]
gi|301753755|ref|XP_002912713.1| PREDICTED: high mobility group protein B2-like [Ailuropoda
melanoleuca]
gi|410956554|ref|XP_003984907.1| PREDICTED: high mobility group protein B2 [Felis catus]
gi|281338293|gb|EFB13877.1| hypothetical protein PANDA_000462 [Ailuropoda melanoleuca]
Length = 210
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|11321591|ref|NP_002120.1| high mobility group protein B2 [Homo sapiens]
gi|83035095|ref|NP_001032705.1| high mobility group protein B2 [Bos taurus]
gi|194688133|ref|NP_001124160.1| high mobility group protein B2 [Homo sapiens]
gi|194688135|ref|NP_001124161.1| high mobility group protein B2 [Homo sapiens]
gi|332820789|ref|XP_517538.3| PREDICTED: high mobility group protein B2 isoform 2 [Pan
troglodytes]
gi|332820791|ref|XP_003310651.1| PREDICTED: high mobility group protein B2 isoform 1 [Pan
troglodytes]
gi|397505874|ref|XP_003823467.1| PREDICTED: high mobility group protein B2 isoform 1 [Pan paniscus]
gi|397505876|ref|XP_003823468.1| PREDICTED: high mobility group protein B2 isoform 2 [Pan paniscus]
gi|397505878|ref|XP_003823469.1| PREDICTED: high mobility group protein B2 isoform 3 [Pan paniscus]
gi|410038949|ref|XP_003950520.1| PREDICTED: high mobility group protein B2 [Pan troglodytes]
gi|123374|sp|P26583.2|HMGB2_HUMAN RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|109940084|sp|P40673.3|HMGB2_BOVIN RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|32333|emb|CAA44395.1| HMG-2 [Homo sapiens]
gi|184236|gb|AAA58659.1| high mobility group 2 protein [Homo sapiens]
gi|12654471|gb|AAH01063.1| High-mobility group box 2 [Homo sapiens]
gi|54696426|gb|AAV38585.1| high-mobility group box 2 [Homo sapiens]
gi|61358840|gb|AAX41628.1| high-mobility group box 2 [synthetic construct]
gi|71679685|gb|AAI00020.1| HMGB2 protein [Homo sapiens]
gi|81674324|gb|AAI09756.1| High-mobility group box 2 [Bos taurus]
gi|119625163|gb|EAX04758.1| high-mobility group box 2, isoform CRA_a [Homo sapiens]
gi|119625164|gb|EAX04759.1| high-mobility group box 2, isoform CRA_a [Homo sapiens]
gi|123982946|gb|ABM83214.1| high-mobility group box 2 [synthetic construct]
gi|123997623|gb|ABM86413.1| high-mobility group box 2 [synthetic construct]
gi|189053183|dbj|BAG34805.1| unnamed protein product [Homo sapiens]
gi|208966462|dbj|BAG73245.1| high-mobility group box 2 [synthetic construct]
gi|296484972|tpg|DAA27087.1| TPA: high mobility group protein B2 [Bos taurus]
gi|380785663|gb|AFE64707.1| high mobility group protein B2 [Macaca mulatta]
gi|383417929|gb|AFH32178.1| high mobility group protein B2 [Macaca mulatta]
gi|383417931|gb|AFH32179.1| high mobility group protein B2 [Macaca mulatta]
gi|383417933|gb|AFH32180.1| high mobility group protein B2 [Macaca mulatta]
gi|384941858|gb|AFI34534.1| high mobility group protein B2 [Macaca mulatta]
gi|384946750|gb|AFI36980.1| high mobility group protein B2 [Macaca mulatta]
gi|410212048|gb|JAA03243.1| high-mobility group box 2 [Pan troglodytes]
gi|410212050|gb|JAA03244.1| high-mobility group box 2 [Pan troglodytes]
gi|410253758|gb|JAA14846.1| high-mobility group box 2 [Pan troglodytes]
gi|410253760|gb|JAA14847.1| high-mobility group box 2 [Pan troglodytes]
gi|410304294|gb|JAA30747.1| high-mobility group box 2 [Pan troglodytes]
gi|410304296|gb|JAA30748.1| high-mobility group box 2 [Pan troglodytes]
gi|410337391|gb|JAA37642.1| high-mobility group box 2 [Pan troglodytes]
gi|410337393|gb|JAA37643.1| high-mobility group box 2 [Pan troglodytes]
gi|410337395|gb|JAA37644.1| high mobility group box 2 [Pan troglodytes]
gi|440908504|gb|ELR58513.1| High mobility group protein B2 [Bos grunniens mutus]
gi|738688|prf||2001363A high mobility group protein 2
Length = 209
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|395840000|ref|XP_003792858.1| PREDICTED: high mobility group protein B2 [Otolemur garnettii]
Length = 209
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKNDKARYDREMKNY 78
>gi|383417927|gb|AFH32177.1| high mobility group protein B2 [Macaca mulatta]
Length = 206
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|351701092|gb|EHB04011.1| High mobility group protein B2 [Heterocephalus glaber]
Length = 215
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 94 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 152
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 153 KEKYEKDIAAYRAK 166
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|296195168|ref|XP_002745261.1| PREDICTED: high mobility group protein B2-like isoform 2
[Callithrix jacchus]
Length = 205
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|291413997|ref|XP_002723251.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQMCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|291385922|ref|XP_002709517.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
gi|344288245|ref|XP_003415861.1| PREDICTED: high mobility group protein B2-like [Loxodonta africana]
Length = 210
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|297674678|ref|XP_002815340.1| PREDICTED: high mobility group protein B2 isoform 1 [Pongo abelii]
gi|297674680|ref|XP_002815341.1| PREDICTED: high mobility group protein B2 isoform 2 [Pongo abelii]
gi|395735499|ref|XP_003776594.1| PREDICTED: high mobility group protein B2 [Pongo abelii]
gi|402870856|ref|XP_003899415.1| PREDICTED: high mobility group protein B2 isoform 1 [Papio anubis]
gi|402870858|ref|XP_003899416.1| PREDICTED: high mobility group protein B2 isoform 2 [Papio anubis]
gi|402871219|ref|XP_003899573.1| PREDICTED: high mobility group protein B2-like [Papio anubis]
gi|90086209|dbj|BAE91657.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|332217748|ref|XP_003258025.1| PREDICTED: high mobility group protein B2 [Nomascus leucogenys]
gi|426346003|ref|XP_004040680.1| PREDICTED: high mobility group protein B2 isoform 1 [Gorilla
gorilla gorilla]
gi|426346005|ref|XP_004040681.1| PREDICTED: high mobility group protein B2 isoform 2 [Gorilla
gorilla gorilla]
gi|426346007|ref|XP_004040682.1| PREDICTED: high mobility group protein B2 isoform 3 [Gorilla
gorilla gorilla]
gi|54696428|gb|AAV38586.1| high-mobility group box 2 [Homo sapiens]
Length = 208
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|417397133|gb|JAA45600.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 208
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
AK DPNKP+ S++ F++ R+ KK++P+ + S K +WK+MS EK+ +E
Sbjct: 2 AKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFSEFSKKCSERWKTMSAKEKSKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|410910282|ref|XP_003968619.1| PREDICTED: high mobility group-T protein-like isoform 1 [Takifugu
rubripes]
Length = 196
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E R K ENP +T + K G W S + EK PY
Sbjct: 85 KKRFKDPNAPKRPPSAFFLFCAELRPKVKSENPGLT-IGDTAKKLGEMWNSKTAEEKQPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKAAKLKEKYDKDIVAYRTK 164
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P+ + + K +WK+MSP EK +E
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|121705796|ref|XP_001271161.1| nucleosome binding protein (Nhp6a), putative [Aspergillus clavatus
NRRL 1]
gi|119399307|gb|EAW09735.1| nucleosome binding protein (Nhp6a), putative [Aspergillus clavatus
NRRL 1]
Length = 104
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
+ ++ + KR ++ KKDPN PKR SA+ F + R ++ENP ++ VGK G +WK
Sbjct: 6 TSTRTKTKRVERKKKDPNAPKRGLSAYMFFANDNRDKVREENPGIS-FGQVGKMLGERWK 64
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
++S +E+ PYE KA K Y + +YN Q
Sbjct: 65 ALSDSERRPYEEKAATDKKRYEDEKASYNAAQ 96
>gi|47522942|ref|NP_999228.1| high mobility group protein B2 [Sus scrofa]
gi|123375|sp|P17741.2|HMGB2_PIG RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|164492|gb|AAA31051.1| non-histone protein HMG2 precursor [Sus scrofa]
Length = 210
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAY 123
K +Y K + AY
Sbjct: 152 KEKYEKDIAAY 162
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|32335|emb|CAA78938.1| HMG2B [Homo sapiens]
Length = 186
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 70 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 128
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 129 KEKYEKDIAAYGAK 142
>gi|355778495|gb|EHH63531.1| hypothetical protein EGM_16518 [Macaca fascicularis]
Length = 210
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|110287688|sp|Q4PBZ9.2|NHP6_USTMA RecName: Full=Non-histone chromosomal protein 6
Length = 99
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR KAKKDP+ PKRP SA+ F ++ R+ K NP VG+ G KWK MS AEK
Sbjct: 16 KRTTKAKKDPDAPKRPLSAYMFFSQDQRERVKNANPEA-GFGEVGRLLGAKWKEMSEAEK 74
Query: 103 APYESKAEKLKSEYGKKMNAYNKKQ 127
PY A + K+ + AYNK++
Sbjct: 75 KPYNDMANRDKARAEAEKAAYNKRR 99
>gi|402591244|gb|EJW85174.1| hypothetical protein WUBG_03914 [Wuchereria bancrofti]
Length = 246
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 30 ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
T ++ + + R+ R+K++K+DPN+P++P SA+ +F + + T K +PN + V K
Sbjct: 78 TTNQVTNRTSRRTIRKKRSKRDPNEPQKPVSAYALFFRDTQATIKGRSPNA-SFGEVSKI 136
Query: 90 AGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQVT 129
W S+ K+ Y+ + E K +Y KK+ AY +Q++
Sbjct: 137 VASMWDSLDCHAKSLYKQRTEMAKKDYLKKLAAYRAQQIS 176
>gi|361130747|gb|EHL02497.1| putative High mobility group protein 20A [Glarea lozoyensis 74030]
Length = 267
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 16/118 (13%)
Query: 19 PNDRKVGK-RKAATAKLD----------SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLE 67
P + + G+ +K++T+K D GSKR+ +R KA D N P+RPPSA+ +F
Sbjct: 100 PAEERTGEEQKSSTSKQDGKDRSGTGGPQGSKRKYRRHPKA--DENCPERPPSAYVIFSN 157
Query: 68 EFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+ R+ K N + T ++ K G W++++PAEK PYE +A K Y ++ Y K
Sbjct: 158 KMREELKGRNLSFTEIA---KLVGENWQNLAPAEKEPYEQQAFSAKERYNGELAEYKK 212
>gi|320580355|gb|EFW94578.1| high-mobility group non-histone chromosomal protein, putative
[Ogataea parapolymorpha DL-1]
Length = 91
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R + ENP + A +GK G KWK++ A KAPYE+KAE
Sbjct: 15 DPNAPKRSLSAYMFFANEQRDIVRAENPGI-AFGQIGKLLGEKWKALDEAGKAPYEAKAE 73
Query: 111 KLKSEYGKKMNAYNKKQ 127
K Y + + Y K Q
Sbjct: 74 ADKKRYELEKSEYTKSQ 90
>gi|297813579|ref|XP_002874673.1| hypothetical protein ARALYDRAFT_489947 [Arabidopsis lyrata subsp.
lyrata]
gi|297320510|gb|EFH50932.1| hypothetical protein ARALYDRAFT_489947 [Arabidopsis lyrata subsp.
lyrata]
Length = 448
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 7/113 (6%)
Query: 14 QEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKK-DPNKPKRPPSAFFVFLEEFRKT 72
QEAL+ + K+K T + +K K +KK +K DPNKPK+P S++F+F +E RK+
Sbjct: 337 QEALQ-----LLKKKEKTDNIIKKTKEMTKNKKKNEKVDPNKPKKPASSYFLFCKEARKS 391
Query: 73 FKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+E+P + S V KWK + EK Y KA +L Y K++ YNK
Sbjct: 392 VLEEHPGINN-STVTAHISLKWKELGEEEKQVYNGKAAELMEAYKKEVEEYNK 443
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPK P SA+ ++ E R K EN +V V K G +WK++S +KAPY+ A+
Sbjct: 244 DPLKPKHPISAYLIYANERRAALKGENKSVI---EVAKMTGEEWKNLSEEQKAPYDQMAK 300
Query: 111 KLKSEYGKKMNAY 123
K K Y ++M Y
Sbjct: 301 KKKEIYLQEMEGY 313
>gi|189236107|ref|XP_973934.2| PREDICTED: similar to High mobility group protein DSP1 (Protein
dorsal switch 1) [Tribolium castaneum]
Length = 505
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
G K++GK+ K+ K DPN PKR SAFF F + R K +NP V + K G +W
Sbjct: 381 GEKQRGKKRKQVK-DPNAPKRSLSAFFWFSNDERAKVKSQNPEF-GVGDIAKELGRRWAD 438
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQV 128
P K+ YE+ A+K K+ Y K+M AY KK +
Sbjct: 439 AEPEMKSKYEALADKDKARYEKEMTAYKKKNM 470
>gi|119588737|gb|EAW68331.1| hCG1991922, isoform CRA_a [Homo sapiens]
gi|119588738|gb|EAW68332.1| hCG1991922, isoform CRA_a [Homo sapiens]
Length = 188
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF++ E+ K E P ++ V K G W + + +K PY
Sbjct: 35 KKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLS-FGDVAKKLGEMWNNTAADDKQPY 93
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E ++ KLK +Y K + AY K
Sbjct: 94 EKRSAKLKEKYEKDIAAYRAK 114
>gi|344300446|gb|EGW30767.1| Non-histone chromosomal protein 6 [Spathaspora passalidarum NRRL
Y-27907]
Length = 93
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDP+ PKR SA+ F E R + ENP ++ VGK G KWK+++ EK PYE+K
Sbjct: 14 KKDPDAPKRSLSAYMFFANENRDIVRAENPGIS-FGQVGKLLGEKWKALTADEKVPYENK 72
Query: 109 AEKLKSEYGKKMNAYNKK 126
AE K Y K+ Y K+
Sbjct: 73 AETDKKRYEKEKAEYAKR 90
>gi|336465411|gb|EGO53651.1| hypothetical protein NEUTE1DRAFT_106544 [Neurospora tetrasperma
FGSC 2508]
gi|350295304|gb|EGZ76281.1| hypothetical protein NEUTE2DRAFT_122932 [Neurospora tetrasperma
FGSC 2509]
Length = 592
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
+KR+ +R KA D N P+RPPSA+ +F + R+ K N + T ++ K G W+++
Sbjct: 109 TKRKYRRHPKA--DENAPERPPSAYVLFSNKMREDLKGRNLSFTEIA---KLVGENWQNL 163
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+PAEK PYESKA+ K +Y ++ Y K
Sbjct: 164 TPAEKEPYESKAQAYKEKYHAELAEYKK 191
>gi|355687725|gb|EHH26309.1| hypothetical protein EGK_16239 [Macaca mulatta]
Length = 209
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKTMSAKEKSKFEG 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 MAKSDKVRYDREMKNY 78
>gi|167396118|ref|XP_001741910.1| non-histone chromosomal protein [Entamoeba dispar SAW760]
gi|165893321|gb|EDR21615.1| non-histone chromosomal protein, putative [Entamoeba dispar SAW760]
Length = 111
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN+PK+P SA+F++L E R + K+E+P++ + + K A +WK++ EK Y++KA+
Sbjct: 23 PNRPKKPQSAYFLYLNEHRASIKEEHPDIK-FTEISKVASEQWKALGEEEKKEYQAKADA 81
Query: 112 LKSEYGKKMNAYN-KKQVT 129
+ +Y K M Y KKQ +
Sbjct: 82 AREQYKKDMEKYTGKKQAS 100
>gi|291395415|ref|XP_002714100.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R + E+ ++ + K G W S ++ PYE KA
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIRSEHSGLS-IGDTAKKLGEMWSEQSAKDEQPYEQKAA 149
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + AY K
Sbjct: 150 KLKEKYEKDIAAYRAK 165
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPN+P+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNEPRGKMSSYAFFVQTCREEHKKKHPDSSINFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKACYDREMKNY 78
>gi|224058355|ref|XP_002299486.1| high mobility group family [Populus trichocarpa]
gi|222846744|gb|EEE84291.1| high mobility group family [Populus trichocarpa]
Length = 498
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPK P SAFF+F E R EN NV V K AG +WK+M+ +K PYE A+
Sbjct: 295 DPLKPKHPLSAFFLFSNERRAALLAENKNVL---EVAKIAGEEWKNMTEKQKRPYEEIAK 351
Query: 111 KLKSEYGKKMNAY 123
K K +Y ++M AY
Sbjct: 352 KNKEKYTQEMEAY 364
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPK+P S+F +F +E RK+ E+P + + S + KWK + EK + KA
Sbjct: 420 DPNKPKKPASSFLLFSKETRKSLVHEHPGINS-STLTAMISVKWKELIQEEKQIWNCKAA 478
Query: 111 KLKSEYGKKMNAYNK 125
+ Y K++ Y+K
Sbjct: 479 EAMEAYKKELEEYHK 493
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N+ KRP + ++ ++ KKENP+ + G KWK+++ EK PYE K +
Sbjct: 178 NEIKRPCPPYSLWCKDQWNEVKKENPDA-EFKDISHILGAKWKTITAEEKKPYEEKYQVE 236
Query: 113 KSEYGKKM 120
K Y K M
Sbjct: 237 KEAYLKLM 244
>gi|351705938|gb|EHB08857.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 176
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPS FF+F E+ K E+P ++ + V K W + + +K PY
Sbjct: 24 KKKFKDPNAPKRPPSTFFLFCSEYCPKIKGEHPGLS-IGDVAKKLEEMWNNAAADDKQPY 82
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK Y K + AY K
Sbjct: 83 EKKAAKLKENYEKDIAAYRAK 103
>gi|443684506|gb|ELT88434.1| hypothetical protein CAPTEDRAFT_172235 [Capitella teleta]
Length = 734
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRP SA+F++L E R+ K ENP+ V+ + K AG +WK ++ +K +E A
Sbjct: 546 DPNKPKRPQSAYFLWLNEMREEIKAENPD-AGVTDIAKLAGQRWKEVT--DKTRWEGLAV 602
Query: 111 KLKSEYGKKMNAY 123
K K Y K M Y
Sbjct: 603 KAKESYEKAMEEY 615
>gi|410044942|ref|XP_001169551.3| PREDICTED: high mobility group protein B1-like [Pan troglodytes]
Length = 269
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF++ E+ K E P ++ + K G W + + +K PY
Sbjct: 113 KKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLS-IGDAAKKLGEMWNNTAADDKQPY 171
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E ++ KLK +Y K + AY K
Sbjct: 172 EKRSAKLKEKYEKDIAAYRAK 192
>gi|397475678|ref|XP_003809257.1| PREDICTED: high mobility group protein B3-like [Pan paniscus]
Length = 165
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKRPPS FF+F E R K NP ++ V V K G W +++ +EK PY +KA
Sbjct: 66 DPSAPKRPPSGFFLFSSEIRPKIKSTNPGIS-VGDVAKKLGEMWNNLNDSEKQPYITKAA 124
Query: 111 KLKSEYGK 118
KLK +Y K
Sbjct: 125 KLKEKYEK 132
>gi|255074117|ref|XP_002500733.1| hypothetical protein MICPUN_57400 [Micromonas sp. RCC299]
gi|226515996|gb|ACO61991.1| hypothetical protein MICPUN_57400 [Micromonas sp. RCC299]
Length = 646
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PK+P SA+ +F +E R ENP ++ ++ V K G +WK++ EK+ +E+KA+
Sbjct: 567 DPNAPKKPLSAYIIFTKERRSAVVAENPGLS-LTEVTKELGARWKAIGAEEKSVFEAKAK 625
Query: 111 KLKSEYGKKMNAYNKKQ 127
K K Y +M AY Q
Sbjct: 626 KDKERYAVEMEAYEATQ 642
>gi|388582419|gb|EIM22724.1| hypothetical protein WALSEDRAFT_53977 [Wallemia sebi CBS 633.66]
Length = 137
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 33 KLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGG 92
K D+ + K+ K KKD N PKR SA+ +E R KKENPN++ VGK G
Sbjct: 3 KADTKPRANTKKAAKPKKDENAPKRALSAYMYMSQEHRAEVKKENPNIS-FGEVGKVLGA 61
Query: 93 KWKSMSPAEKAPYESKA 109
KWK MS EK PYE +A
Sbjct: 62 KWKEMSAEEKKPYEEQA 78
>gi|440298682|gb|ELP91313.1| hypothetical protein EIN_153200 [Entamoeba invadens IP1]
Length = 185
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPK+P +A+ ++L E R K++ P++ V+ V K AG WK+M +K PY+ KA+
Sbjct: 96 DPNKPKKPQTAYMLYLNEHRAEIKEKFPDM-KVTEVAKKAGENWKAMGEEDKKPYQDKAD 154
Query: 111 KLKSEYGKKMNAYNKK 126
K K + +M Y +K
Sbjct: 155 KAKETWKTEMKKYEEK 170
>gi|327260386|ref|XP_003215015.1| PREDICTED: FACT complex subunit SSRP1-like [Anolis carolinensis]
Length = 705
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+ + E K KDPN PKRP SA+ ++L R + E+P + +V+ V K AG WK+MS
Sbjct: 530 RKRQSEGKKGKDPNAPKRPLSAYMLWLNANRDKIRSESPGM-SVTDVSKKAGELWKAMSK 588
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYNK 125
+K ++ KAE K +Y K M YN+
Sbjct: 589 EKKEEWDRKAEDAKRDYEKAMKEYNE 614
>gi|170097113|ref|XP_001879776.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645179|gb|EDR09427.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 114
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 60/113 (53%), Gaps = 14/113 (12%)
Query: 12 VSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRK 71
+ +EA KP KRKAA K D + R+GK KDPNKPKR SA+ F +++R
Sbjct: 1 MPKEATKP------KRKAAE-KADKATSRKGK------KDPNKPKRALSAYMFFSQDWRD 47
Query: 72 TFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYN 124
K ENP+ VGK G KWK + EK PY +A K K+ + AY+
Sbjct: 48 RIKAENPDA-GFGEVGKLLGAKWKELDEEEKKPYVEQASKDKTRAEEAKAAYD 99
>gi|407926962|gb|EKG19868.1| High mobility group HMG1/HMG2 [Macrophomina phaseolina MS6]
Length = 106
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 31 TAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAA 90
T++ SK GK+ KKDPN PKR SA+ F + R ++ENP + VGK
Sbjct: 7 TSRKTKASKADGKK----KKDPNAPKRGLSAYMFFANDMRDKVREENPGIK-FGEVGKIL 61
Query: 91 GGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYN 124
G +WK++S ++APYE+KA K Y + AYN
Sbjct: 62 GERWKALSEKQRAPYEAKAANDKKRYEDEKAAYN 95
>gi|344252855|gb|EGW08959.1| TRAF family member-associated NF-kappa-B activator [Cricetulus
griseus]
Length = 427
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R FK E+P + ++ V K G W + + +K PY
Sbjct: 299 KKKFKDPNAPKRPPSAFFLFCSEYRPKFKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPY 357
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK ++ K + AY K
Sbjct: 358 EKKAAKLKEKHEKDIAAYRAK 378
>gi|449459450|ref|XP_004147459.1| PREDICTED: FACT complex subunit SSRP1-like [Cucumis sativus]
Length = 642
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR S F F + R+ KK NP ++ + +G+ G KW MS EK PYESKA
Sbjct: 554 DPNAPKRAISGFMFFSKMERENIKKSNPGIS-FTELGRVLGDKWNKMSAEEKEPYESKAR 612
Query: 111 KLKSEYGKKMNAYNKKQVTNL 131
K Y ++++ Y Q N+
Sbjct: 613 DDKKRYKEEISGYKNPQPMNI 633
>gi|449509245|ref|XP_004163534.1| PREDICTED: FACT complex subunit SSRP1-like, partial [Cucumis
sativus]
Length = 303
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR S F F + R+ KK NP ++ + +G+ G KW MS EK PYESKA
Sbjct: 215 DPNAPKRAISGFMFFSKMERENIKKSNPGIS-FTELGRVLGDKWNKMSAEEKEPYESKAR 273
Query: 111 KLKSEYGKKMNAYNKKQVTNL 131
K Y ++++ Y Q N+
Sbjct: 274 DDKKRYKEEISGYKNPQPMNI 294
>gi|119491564|ref|XP_001263303.1| nucleosome binding protein (Nhp6a), putative [Neosartorya fischeri
NRRL 181]
gi|119411463|gb|EAW21406.1| nucleosome binding protein (Nhp6a), putative [Neosartorya fischeri
NRRL 181]
Length = 104
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
+ ++ + KR ++ KKDPN PKR SA+ F E R ++ENP ++ VGK G +WK
Sbjct: 6 TSTRTKTKRVERKKKDPNAPKRGLSAYMFFANENRDKVREENPGIS-FGQVGKMLGERWK 64
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
++S ++ PYE KA K Y + +YN Q
Sbjct: 65 ALSDTDRRPYEEKAAADKKRYEDEKASYNAAQ 96
>gi|291415825|ref|XP_002724150.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEHSVKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAE 110
PNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E A+
Sbjct: 6 PNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAK 65
Query: 111 KLKSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 66 SDKARYDREMKNY 78
>gi|328856362|gb|EGG05484.1| hypothetical protein MELLADRAFT_31192 [Melampsora larici-populina
98AG31]
Length = 82
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR K +KDPN PKRP SA+ F +++R+ K ENP V+ +G+ G KWKS+ EK
Sbjct: 1 KRRVKREKDPNAPKRPLSAYMFFSQDWRERIKTENPEVS-FGEIGRLLGLKWKSLGEEEK 59
Query: 103 APYESKA 109
PYE A
Sbjct: 60 KPYEDMA 66
>gi|239606992|gb|EEQ83979.1| nucleosome binding protein [Ajellomyces dermatitidis ER-3]
Length = 105
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R +K KKDPN PKR SA+ F E R ++ENP ++ VGK G +WK+++ ++A
Sbjct: 13 RGEKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGIS-FGQVGKVLGERWKALNEKQRA 71
Query: 104 PYESKAEKLKSEYGKKMNAYN 124
PYE+KA K Y + +YN
Sbjct: 72 PYEAKAAADKKRYEDEKASYN 92
>gi|261194046|ref|XP_002623428.1| nucleosome binding protein [Ajellomyces dermatitidis SLH14081]
gi|239588442|gb|EEQ71085.1| nucleosome binding protein [Ajellomyces dermatitidis SLH14081]
gi|327354542|gb|EGE83399.1| nonhistone chromosomal protein 6A [Ajellomyces dermatitidis ATCC
18188]
Length = 101
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R +K KKDPN PKR SA+ F E R ++ENP ++ VGK G +WK+++ ++A
Sbjct: 13 RGEKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGIS-FGQVGKVLGERWKALNEKQRA 71
Query: 104 PYESKAEKLKSEYGKKMNAYN 124
PYE+KA K Y + +YN
Sbjct: 72 PYEAKAAADKKRYEDEKASYN 92
>gi|409075359|gb|EKM75740.1| hypothetical protein AGABI1DRAFT_116212 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198009|gb|EKV47935.1| hypothetical protein AGABI2DRAFT_191645 [Agaricus bisporus var.
bisporus H97]
Length = 262
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 24 VGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
KRKA A D + ++ KR K K DPN PKRP S++ +F E RK K ++P +T
Sbjct: 51 THKRKADVALDDDEAPKKRKRNAKPK-DPNAPKRPASSYILFQNEIRKQLKDQHPELTNA 109
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
+ WK MS EKA Y E K Y + AY+ +
Sbjct: 110 ELLN-MISDIWKKMSEDEKATYHKLVEDAKERYSQDKKAYDSR 151
>gi|85110964|ref|XP_963712.1| hypothetical protein NCU02819 [Neurospora crassa OR74A]
gi|28925429|gb|EAA34476.1| hypothetical protein NCU02819 [Neurospora crassa OR74A]
Length = 597
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
+KR+ +R KA D N P+RPPSA+ +F + R+ K N + T ++ K G W+++
Sbjct: 109 TKRKYRRHPKA--DENAPERPPSAYVLFSNKMREDLKGRNLSFTEIA---KLVGENWQNL 163
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+PAEK PYESKA+ K +Y ++ Y K
Sbjct: 164 TPAEKEPYESKAQAYKEKYHAELAEYKK 191
>gi|363755760|ref|XP_003648095.1| hypothetical protein Ecym_7459 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892131|gb|AET41278.1| hypothetical protein Ecym_7459 [Eremothecium cymbalariae
DBVPG#7215]
Length = 94
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R + ENP ++ VG+ G KWK++S EK PYE+KAE
Sbjct: 17 DPNAPKRAMSAYMFFANENRDIVRAENPGIS-FGQVGRVLGEKWKALSDDEKQPYEAKAE 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|290986470|ref|XP_002675947.1| predicted protein [Naegleria gruberi]
gi|284089546|gb|EFC43203.1| predicted protein [Naegleria gruberi]
Length = 215
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
D N PKRP S++ +F + +RK+ ENP + V+ V K G KW M+ AEKAPY +KA
Sbjct: 116 DENAPKRPLSSYMLFSQTYRKSLVAENPTLK-VTEVAKLVGEKWGKMNDAEKAPYVNKAA 174
Query: 111 KLKSEYGKKMNAYNKKQ 127
+LK+ Y + + Y+ Q
Sbjct: 175 ELKAAYNIEKSKYDATQ 191
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKE--NPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
KKDPN PKRP + FF+F +E R+ K + S V K G +W ++ +EK Y
Sbjct: 9 KKDPNAPKRPKTGFFLFCDERREKVKATLGEGEKKSASEVSKLLGEEWGKLTDSEKDKYN 68
Query: 107 SKAEKLKSEYGKKMNAYNK 125
S ++K Y K+ Y K
Sbjct: 69 SVSKKNMEVYKKQFEEYKK 87
>gi|346468357|gb|AEO34023.1| hypothetical protein [Amblyomma maculatum]
Length = 734
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
G K + R +K ++D NKPKRPPSA+F++L E R KK+NP+ + ++ V K AG WK
Sbjct: 543 GMKERKPRRQKKERDANKPKRPPSAYFLWLAENRDKIKKDNPSFS-ITDVTKRAGELWKE 601
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAY 123
++ +K+ +E +A + ++Y + M AY
Sbjct: 602 VT--DKSKWEQQAVEAAAKYKEAMAAY 626
>gi|45187563|ref|NP_983786.1| ADL310Wp [Ashbya gossypii ATCC 10895]
gi|74694642|sp|Q75B82.1|NHP6_ASHGO RecName: Full=Non-histone chromosomal protein 6
gi|44982301|gb|AAS51610.1| ADL310Wp [Ashbya gossypii ATCC 10895]
gi|374106998|gb|AEY95906.1| FADL310Wp [Ashbya gossypii FDAG1]
Length = 94
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R + ENP ++ VG+ G KWK++S EK PYE+KAE
Sbjct: 17 DPNAPKRAMSAYMFFANENRDIVRAENPGIS-FGQVGRVLGEKWKALSDDEKQPYEAKAE 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|321476548|gb|EFX87508.1| hypothetical protein DAPPUDRAFT_306496 [Daphnia pulex]
Length = 191
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KDPN PKR SAFF F + R K+++P T + + K G +W A KA Y
Sbjct: 93 RKQVKDPNAPKRSLSAFFWFCHDLRGHVKEQHPEYT-LGEIAKELGRRWGVSDDATKAQY 151
Query: 106 ESKAEKLKSEYGKKMNAYNKKQV 128
+KAE+ ++ Y + MNAY K ++
Sbjct: 152 AAKAEQDRARYERDMNAYKKSKL 174
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV-SAVGKAAGGKWKSMSPAEKAPY 105
+AK D NKP+ +A+ F++ R+ K + P+ V + G+WK M+ +K +
Sbjct: 3 RAKGDSNKPRGRMTAYAYFMQTCREEHKNKYPDENVVFLEFSRRCAGQWKLMTENDKKRF 62
Query: 106 ESKAEKLKSEYGKKMNAYNKKQ 127
+ AE+ K + +M Y Q
Sbjct: 63 QGMAERDKLRFENEMRHYQPPQ 84
>gi|146412508|ref|XP_001482225.1| hypothetical protein PGUG_05245 [Meyerozyma guilliermondii ATCC
6260]
gi|146392989|gb|EDK41147.1| hypothetical protein PGUG_05245 [Meyerozyma guilliermondii ATCC
6260]
Length = 90
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKR SA+ F E R + ENP + A VGK G KWK+M+ EK PYE+KAE
Sbjct: 13 DPDAPKRSLSAYMFFANENRDIIRAENPGI-AFGQVGKLLGEKWKAMNADEKVPYETKAE 71
Query: 111 KLKSEYGKKMNAYNKK 126
K Y K+ Y K+
Sbjct: 72 ADKKRYEKEKAEYAKR 87
>gi|340520749|gb|EGR50985.1| predicted protein [Trichoderma reesei QM6a]
Length = 83
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
+DPN PKR SA+ F E R+ ++ENP ++ VGK G +WK+++ ++APYE+KA
Sbjct: 2 QDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKLLGERWKALNDKQRAPYEAKA 60
Query: 110 EKLKSEYGKKMNAYNKKQ 127
K Y + AYN Q
Sbjct: 61 AADKKRYEDEKQAYNADQ 78
>gi|322517988|gb|ADX06860.1| high mobility group protein B1 [Sciaenops ocellatus]
Length = 206
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K E P +T + V K G W + +K P+
Sbjct: 85 KKKYKDPNAPKRPPSAFFIFCSEFRPKVKGEAPGLT-IGEVAKRLGEMWNGTASEDKQPF 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K++ AY +K
Sbjct: 144 EKKAAKLKEKYEKEVAAYRQK 164
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
K+ KP+ S++ F++ R+ KK++P+ + + K G+WK+MS EK +E
Sbjct: 3 KEQGKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSGRWKTMSSKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A + K+ Y ++M +Y
Sbjct: 63 ARQDKARYEREMMSY 77
>gi|336274626|ref|XP_003352067.1| hypothetical protein SMAC_00615 [Sordaria macrospora k-hell]
gi|380096352|emb|CCC06400.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 595
Score = 62.4 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
+KR+ +R KA D N P+RPPSA+ +F + R+ K N + T ++ K G W+++
Sbjct: 105 TKRKYRRHPKA--DENAPERPPSAYVLFSNKMREDLKGRNLSFTEIA---KLVGENWQNL 159
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+PAEK PYESKA+ K +Y ++ Y K
Sbjct: 160 TPAEKEPYESKAQAYKEKYHAELAEYKK 187
>gi|343427561|emb|CBQ71088.1| probable NHP6B-nonhistone chromosomal protein [Sporisorium
reilianum SRZ2]
Length = 99
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR K+KKDP PKRP SA+ F ++ R+ K NP S VG+ G KW MS AEK
Sbjct: 16 KRTTKSKKDPAAPKRPLSAYMFFSQDHRERVKTANPEA-GFSDVGRLLGAKWNEMSDAEK 74
Query: 103 APYESKAEKLKSEYGKKMNAYNKKQ 127
PY A + K+ + AYNK++
Sbjct: 75 KPYNDMANRDKARAEAEKAAYNKRR 99
>gi|148226156|ref|NP_001084164.1| FACT complex subunit SSRP1 [Xenopus laevis]
gi|82175412|sp|Q9W602.1|SSRP1_XENLA RecName: Full=FACT complex subunit SSRP1; AltName: Full=DNA
unwinding factor 87 kDa subunit; Short=DUF87; AltName:
Full=Facilitates chromatin transcription complex subunit
ssrp1; AltName: Full=Structure-specific recognition
protein 1
gi|4586285|dbj|BAA76333.1| DUF87 [Xenopus laevis]
Length = 693
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K E K KDP PKRP SA+ ++L R+ K ENP + +++ + K AG WK+MS +K
Sbjct: 529 KPEAKKTKDPGAPKRPMSAYMLWLNASREKIKSENPGI-SITDLSKKAGEIWKNMSRDKK 587
Query: 103 APYESKAEKLKSEYGKKMNAYN 124
++ +AE+ K +Y K M YN
Sbjct: 588 EEWDRRAEEAKRDYEKAMKEYN 609
>gi|392575401|gb|EIW68534.1| hypothetical protein TREMEDRAFT_32029 [Tremella mesenterica DSM
1558]
Length = 116
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR K KKDPN PKR SA+ F++++R K ++P+V+ GK G KWK+MS AEK
Sbjct: 19 KRAPKEKKDPNAPKRGLSAYMFFVQDYRPKIKNDHPDVS-FGETGKLLGEKWKAMSAAEK 77
Query: 103 APYESKA--EKLKSEYGKK 119
P+E A +KL++E KK
Sbjct: 78 KPFEDLAAKDKLRAEKDKK 96
>gi|302684321|ref|XP_003031841.1| hypothetical protein SCHCODRAFT_76744 [Schizophyllum commune H4-8]
gi|300105534|gb|EFI96938.1| hypothetical protein SCHCODRAFT_76744 [Schizophyllum commune H4-8]
Length = 114
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 9/102 (8%)
Query: 26 KRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA 85
+RKAAT + K +KAKKDPN PKR SA+ F +++R+ K ENP+ +
Sbjct: 10 RRKAAT--------KSEKTPRKAKKDPNAPKRALSAYMFFSQDWRERVKAENPDAS-FGE 60
Query: 86 VGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
+GK G KWK M EK PY +KA K K AY++K+
Sbjct: 61 LGKILGAKWKEMDEDEKKPYVAKAAKDKERAEADKAAYDEKK 102
>gi|395526464|ref|XP_003765383.1| PREDICTED: high mobility group protein B4 [Sarcophilus harrisii]
Length = 207
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP PKRPPS+FF+F E K +NP+ + V V K G W S +K PYE KA
Sbjct: 92 DPKAPKRPPSSFFLFSREHYTKIKSDNPHWSVVQ-VAKLLGEMWSKKSEQDKQPYEEKAA 150
Query: 111 KLKSEYGKKMNAY 123
+L+++Y +++ Y
Sbjct: 151 RLRAKYHQELMTY 163
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPN-VTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
KPK S++ FL R K++ PN K KWK++S EK+ YE+ A
Sbjct: 7 KPKVNLSSYVHFLLNCRNKHKEQQPNAYINFKEFSKRCSEKWKTISKHEKSKYEAIARLD 66
Query: 113 KSEYGKKMNAY 123
K+ Y K+M Y
Sbjct: 67 KARYQKEMKNY 77
>gi|354470970|ref|XP_003497717.1| PREDICTED: high mobility group protein B1-like [Cricetulus griseus]
Length = 215
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+ K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYCPKIKGEHPGLS-IGDVAKKLGELWNNTAAEDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQVTN 130
KA KLK ++ K + AY K N
Sbjct: 145 GKKAAKLKEKHEKGIAAYRAKGKPN 169
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKRKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|361127235|gb|EHK99210.1| putative Non-histone chromosomal protein 6 [Glarea lozoyensis
74030]
Length = 100
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
++ KR +K KKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK++S
Sbjct: 8 KRAKRTEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKVLGERWKALSD 66
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYN 124
++ PY +KA+ K Y ++ YN
Sbjct: 67 TQRKPYAAKADADKIRYEEEKANYN 91
>gi|344237192|gb|EGV93295.1| High mobility group protein B1 [Cricetulus griseus]
Length = 203
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+ K E+P ++ + V K G W + + +K PY
Sbjct: 74 KKKFKDPNAPKRPPSAFFLFCSEYCPKIKGEHPGLS-IGDVAKKLGELWNNTAAEDKQPY 132
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
KA KLK ++ K + AY K
Sbjct: 133 GKKAAKLKEKHEKGIAAYRAK 153
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
S++ F++ R+ KK++P+ + S K +WK+MS EK +E A+ K+ Y +
Sbjct: 2 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKRKFEDMAKADKARYER 61
Query: 119 KMNAY 123
+M Y
Sbjct: 62 EMKTY 66
>gi|149628522|ref|XP_001521757.1| PREDICTED: high mobility group protein B2-like, partial
[Ornithorhynchus anatinus]
Length = 106
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA
Sbjct: 40 DPNAPKRPPSAFFLFCSEQRPKIKSEHPGLS-IGDTAKKLGELWSEQSAKDKLPYEQKAA 98
Query: 111 KLKSEYGK 118
KLK +Y K
Sbjct: 99 KLKEKYEK 106
>gi|378727181|gb|EHY53640.1| non-histone chromosomal protein 6 [Exophiala dermatitidis
NIH/UT8656]
Length = 102
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
SK +G+ EKK KKDPN PKR SA+ F E R++ ++ENP ++ VGK G +WK++
Sbjct: 8 SKTKGRGEKK-KKDPNAPKRGLSAYMFFANEQRESVREENPGIS-FGQVGKVLGDRWKAL 65
Query: 98 SPAEKAPYESKAEKLKSEY 116
+ ++ PYE KA+ K Y
Sbjct: 66 NEKQREPYEKKAQADKKRY 84
>gi|221221758|gb|ACM09540.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P ++ + V K G KW +++ +K PY
Sbjct: 85 KKRFKDPNAPKRPSSAFFIFCADFRPQVKVETPGLS-IGDVAKKLGEKWNNLTAEDKVPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKAAKLKEKYEKDITAYRNK 164
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +W++MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|221220042|gb|ACM08682.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P ++ + V K G KW +++ +K PY
Sbjct: 85 KKRFKDPNAPKRPSSAFFIFCADFRPQVKVETPGLS-IGDVAKKLGEKWNNLTAEDKVPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKAAKLKEKYEKDITAYRNK 164
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|320585897|gb|EFW98576.1| nucleosome-binding protein [Grosmannia clavigera kw1407]
Length = 94
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 42 GKREKK-AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
GK EK+ +KKDPN PKR SA+ F E R+ + ENP ++ VGK G +WK+++
Sbjct: 11 GKVEKRRSKKDPNAPKRGLSAYMFFANEQRENVRDENPGIS-FGQVGKILGERWKALNEK 69
Query: 101 EKAPYESKAEKLKSEYGKKMNAYN 124
++ PYE+KA K Y AYN
Sbjct: 70 QRTPYEAKAAADKKRYEDAKAAYN 93
>gi|339234763|ref|XP_003378936.1| thymus high mobility group box protein TOX [Trichinella spiralis]
gi|316978470|gb|EFV61455.1| thymus high mobility group box protein TOX [Trichinella spiralis]
Length = 328
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 17 LKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKE 76
L N + + + T+K+ R KR + +KDPN+P++P SA+ +F + + T K +
Sbjct: 145 LLSNHKNLTYENSPTSKMTVVKSRTPKRRQNKRKDPNEPQKPVSAYALFFRDTQATIKGQ 204
Query: 77 NPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
NPN T V K W +++ K Y+ K E K +Y K+ AY
Sbjct: 205 NPNAT-FGEVSKIVAAMWDNLAADSKNAYKQKTEMAKKDYLKQCAAY 250
>gi|154284354|ref|XP_001542972.1| nucleosome binding protein [Ajellomyces capsulatus NAm1]
gi|150406613|gb|EDN02154.1| nucleosome binding protein [Ajellomyces capsulatus NAm1]
gi|240273630|gb|EER37150.1| nucleosome binding protein [Ajellomyces capsulatus H143]
gi|325087527|gb|EGC40837.1| nucleosome binding protein [Ajellomyces capsulatus H88]
Length = 102
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK+++ ++APY
Sbjct: 16 EKKKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKVLGERWKALNEKQRAPY 74
Query: 106 ESKAEKLKSEYGKKMNAYN 124
E+KA K Y + +YN
Sbjct: 75 EAKAAADKKRYEDEKASYN 93
>gi|432889764|ref|XP_004075350.1| PREDICTED: high mobility group-T protein-like [Oryzias latipes]
Length = 194
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
++KK KDPN PKRPPSAFF+F +FR K E+P ++ + K G W S S EK
Sbjct: 83 QKKKRFKDPNAPKRPPSAFFLFCADFRPKIKSESPGLS-IGDTAKKLGEMWNSSSAEEKQ 141
Query: 104 PYESKAEKLKSEYGKKMNAYNKK 126
PYE KA KLK +Y K + AY K
Sbjct: 142 PYEKKAAKLKEKYDKDIVAYRTK 164
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P+ + S K +WK+MSP EK +E
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|355565174|gb|EHH21663.1| hypothetical protein EGK_04785, partial [Macaca mulatta]
Length = 201
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 43 KREKKAK-KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
KRE K K KDPN PKRPPSAFF+F E+R K E+P ++ + VGK G W + +
Sbjct: 82 KRETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVGKKPGEMWNDTAADD 140
Query: 102 KAPYESKAEKLK 113
K PYE +K
Sbjct: 141 KHPYEKDIVHIK 152
>gi|302755040|ref|XP_002960944.1| hypothetical protein SELMODRAFT_73858 [Selaginella moellendorffii]
gi|300171883|gb|EFJ38483.1| hypothetical protein SELMODRAFT_73858 [Selaginella moellendorffii]
Length = 457
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
+KDP KPKRP + + + EE R EN V +GK G +W+SM +APYE
Sbjct: 244 EKDPEKPKRPTTGYMAYSEERRPALMNEN---LKVPQIGKILGEEWRSMDEKARAPYEKI 300
Query: 109 AEKLKSEYGKKMNAYNKKQVTNLV 132
A K+ Y +M AYNKK+ V
Sbjct: 301 ATDAKATYLTEMEAYNKKKAQEEV 324
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP + K+P S++F++ + R+ + +NPN + + G WKS+S EK PYE +
Sbjct: 126 DPERIKKPLSSYFLWCNDQREKVRAQNPNA-GIKELSSIFGELWKSVSEEEKKPYEEIYQ 184
Query: 111 KLKSEYGKKMNAYNKKQVTNL 131
K K EY K++ K++ L
Sbjct: 185 KNKEEYLKQLVGKEKREAEAL 205
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA- 109
+P KPK+ +A+ +F E+RK + E P A KW M EK PY ++A
Sbjct: 370 EPGKPKKAATAYILFGMEYRKKLQAEMPTAKFAELTALVA-SKWNEMGAEEKQPYVNQAG 428
Query: 110 -EKLKSEYGKKMNAYNK 125
EKLK Y + M + +
Sbjct: 429 VEKLK--YQEAMEEFKR 443
>gi|444724258|gb|ELW64868.1| High mobility group protein B1 [Tupaia chinensis]
Length = 140
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK K PN KRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 24 KKKFKGPNAAKRPPSAFFLFCSEYRPKIKGEHPGLS-IGGVAKKLGEVWNNTAADDKQPY 82
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E K KLK +Y K + AY K
Sbjct: 83 EKKPAKLKEKYEKDIAAYPDK 103
>gi|331220978|ref|XP_003323164.1| high mobility group protein B1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309302154|gb|EFP78745.1| high mobility group protein B1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 106
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 33 KLD-SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
KLD G+ + KR KK +KDPN PKRP SA+ F +++R+ K ENP+V+ +G+ G
Sbjct: 14 KLDCDGNPVKTKRVKK-EKDPNAPKRPLSAYMYFSQDWRERIKTENPDVS-FGEIGRLLG 71
Query: 92 GKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
KWK +S EK PYE A + K + + Y +
Sbjct: 72 LKWKGLSEEEKKPYEDMASRDKKRHEAEKAEYER 105
>gi|62660600|ref|XP_573625.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|392333089|ref|XP_003752789.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
Length = 209
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKS 114
PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KLK
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 115 EYGKKMNAYNKK 126
+Y K + AY K
Sbjct: 154 KYEKDIAAYRAK 165
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S + F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSLYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|221221148|gb|ACM09235.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P ++ + V K G KW +++ +K PY
Sbjct: 85 KKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS-IGDVAKKLGEKWNNLTAEDKVPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKAAKLKEKYEKDITAYRNK 164
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +W++MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|426397135|ref|XP_004064781.1| PREDICTED: high mobility group protein B3-like [Gorilla gorilla
gorilla]
Length = 221
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 28 KAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVG 87
K D K G E KKDPN KRP S FF+F EFR K NP ++ + +
Sbjct: 85 KVDKVHYDQEMKDNGPVEGGKKKDPNALKRPLSGFFLFCSEFRPKIKSTNPGIS-IGDMA 143
Query: 88 KAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
K G W + S EK PY +KA LK +Y K + Y K
Sbjct: 144 KKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSK 182
>gi|297297620|ref|XP_001106417.2| PREDICTED: high mobility group protein B2-like [Macaca mulatta]
Length = 210
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-TGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYQKDIAAYRAK 165
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKTMSAKEKSKFEG 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 MAKSDKVCYDREMKNY 78
>gi|71019847|ref|XP_760154.1| hypothetical protein UM04007.1 [Ustilago maydis 521]
gi|46099871|gb|EAK85104.1| hypothetical protein UM04007.1 [Ustilago maydis 521]
Length = 286
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
+DP KPKRP SAFF FL + R + + PN+T S G G +WK MS +KAPYE +A
Sbjct: 209 RDPAKPKRPNSAFFEFLNDLRAS-EAVIPNITEFSKRG---GERWKQMSAEQKAPYEQRA 264
Query: 110 EKLKSEYGKKMNAYN 124
+ +Y + + YN
Sbjct: 265 LQALEQYKRDLELYN 279
>gi|395850201|ref|XP_003797684.1| PREDICTED: high mobility group protein B1 [Otolemur garnettii]
Length = 289
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|343425092|emb|CBQ68629.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 290
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
+DP KPKRP SAFF FL + R + + PN+T S G G +WK MS +KAPYE +A
Sbjct: 213 RDPAKPKRPNSAFFEFLNDLRAS-EAVIPNITEFSKRG---GERWKQMSAEQKAPYEQRA 268
Query: 110 EKLKSEYGKKMNAYN 124
+ +Y + + YN
Sbjct: 269 LQALEQYKRDLEIYN 283
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Query: 60 SAFFVFLEE----------FRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
S+F +++ E ++KT K V + + KA G +W ++P KA YE++
Sbjct: 109 SSFLIYMSERVAQLKGEPLYQKTSPKTGAQVVDIVKMAKAVGAEWAQLAPNLKARYEAQH 168
Query: 110 EKLKSEYGKKMNAY 123
E+ K EY + + +
Sbjct: 169 EQEKEEYERALAEW 182
>gi|221485710|gb|EEE23991.1| high mobility group protein, putative [Toxoplasma gondii GT1]
gi|221502922|gb|EEE28632.1| high mobility group protein, putative [Toxoplasma gondii VEG]
Length = 651
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPY 105
+AKKDPN PK+P S++ F ++ R K+ P++ + + VGK G +W +S ++K Y
Sbjct: 570 RAKKDPNAPKKPLSSYMFFAKDKRAEILKKQPSLKSDIGKVGKMIGEEWAKLSSSQKMTY 629
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
+ KAE+ K Y ++M+ YNKK
Sbjct: 630 QKKAEQEKIRYQREMSLYNKK 650
>gi|401412468|ref|XP_003885681.1| High mobility group protein 1, related [Neospora caninum Liverpool]
gi|325120101|emb|CBZ55655.1| High mobility group protein 1, related [Neospora caninum Liverpool]
Length = 98
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEK 102
++K+ KKDPN PK+P S++ F ++ R K+ P++ + + VGK G +W +S ++K
Sbjct: 14 KKKRVKKDPNAPKKPLSSYMFFAKDKRAEILKKQPSLKSDIGKVGKMIGEEWAKLSSSQK 73
Query: 103 APYESKAEKLKSEYGKKMNAYNKKQ 127
Y+ KAE+ K Y ++M+ YNKK+
Sbjct: 74 LTYQKKAEQEKIRYQREMSLYNKKK 98
>gi|223646906|gb|ACN10211.1| High mobility group-T protein [Salmo salar]
gi|223672769|gb|ACN12566.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRP SAFF+F +FR K E P ++ + V K G KW +++ +K PY
Sbjct: 85 KKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS-IGDVAKKLGEKWNNLTAEDKVPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKAAKLKEKYEKDITAYRNK 164
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|156552179|ref|XP_001605958.1| PREDICTED: high mobility group protein DSP1 [Nasonia vitripennis]
Length = 433
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 37 GSKRQGK-REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
G K G+ +++K KDPN PKR SAFF F + R K NP V + K G KW
Sbjct: 314 GEKVTGRGKKRKHIKDPNAPKRSLSAFFWFCNDERGKVKMLNPEY-GVGDIAKELGKKWS 372
Query: 96 SMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
P K YE+ AEK K+ Y ++M AY KKQ
Sbjct: 373 DAGPELKGKYEAMAEKDKARYEREMTAYKKKQ 404
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAV-SAVGKAAGGKWKSMSPAEKAPYESKAEK 111
KP+ +A+ F++ R+ KK++P+ V K +WK+MS EK + AEK
Sbjct: 238 TKPRGRMTAYAFFVQTCRQEHKKKHPDENIVFQEFSKKCALRWKTMSDKEKKRFHEMAEK 297
Query: 112 LKSEYGKKMNAY 123
K Y +M +Y
Sbjct: 298 DKKRYDTEMQSY 309
>gi|444729825|gb|ELW70228.1| High mobility group protein B1 [Tupaia chinensis]
Length = 141
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDP+ PKRPPSAFF+F E+R K E P + V K G W + + K PY
Sbjct: 24 KKKFKDPSAPKRPPSAFFLFCSEYRPEIKGERPG-RFIGDVAKRLGEMWNNTAADGKQPY 82
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E A KLK +Y K + AY K
Sbjct: 83 EKNAAKLKGKYEKDIAAYRAK 103
>gi|74153177|dbj|BAB27638.3| unnamed protein product [Mus musculus]
Length = 191
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSENRPKIKIEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|168021929|ref|XP_001763493.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685286|gb|EDQ71682.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP +PK P SAFF F + R +EN VT + K G +WKSMSP+++AP+E A
Sbjct: 259 DPLRPKHPISAFFAFSQSRRPALLEENKPVTEI---AKILGEEWKSMSPSKRAPFEEIAA 315
Query: 111 KLKSEYGKKMNAYNKKQVTNL 131
K K Y ++ Y K + +L
Sbjct: 316 KEKERYSVELETYKKNKAEDL 336
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 56 KRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
K+P +AF ++ +++R+ +ENPN T + + G KWK++ E+ PYE +
Sbjct: 145 KKPKTAFLLWCKDYRQKVCEENPNAT-FAEISTILGDKWKNVPEEERKPYEDR 196
>gi|237842875|ref|XP_002370735.1| high mobility group protein, putative [Toxoplasma gondii ME49]
gi|211968399|gb|EEB03595.1| high mobility group protein, putative [Toxoplasma gondii ME49]
Length = 644
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPY 105
+AKKDPN PK+P S++ F ++ R K+ P + + + VGK G +W +S ++K Y
Sbjct: 563 RAKKDPNAPKKPLSSYMFFAKDKRAEILKKQPTLKSDIGKVGKMIGEEWAKLSSSQKMTY 622
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
+ KAE+ K Y ++M+ YNKK
Sbjct: 623 QKKAEQEKIRYQREMSLYNKK 643
>gi|444510699|gb|ELV09703.1| High mobility group protein B2 [Tupaia chinensis]
Length = 233
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 40/75 (53%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN PKRPPSAFF+F E K E+P ++ K G W S +K P E KA K
Sbjct: 92 PNVPKRPPSAFFLFCSEHHPKIKSEHPGLSIGDTEKKKLGEMWSEQSAKDKQPCEQKAAK 151
Query: 112 LKSEYGKKMNAYNKK 126
LK +Y K + AY K
Sbjct: 152 LKKKYEKDIAAYRAK 166
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K D NKP+ S++ F++ + KK++P+ + + K KWK+MS EK+ +E
Sbjct: 3 KGDHNKPRGKMSSYAFFVQTCGEEHKKKHPDSSVNFAEFSKKCSEKWKAMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|392883890|gb|AFM90777.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N P+RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +L
Sbjct: 92 NAPRRPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQL 150
Query: 113 KSEYGKKMNAY 123
K +Y K++ AY
Sbjct: 151 KEKYEKEVAAY 161
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAYN 124
A+ K Y ++M YN
Sbjct: 63 LAKNDKVRYDREMRNYN 79
>gi|356496334|ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
Length = 640
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR S F F + R+ KK NP ++ + V + G KWK +S EK PYE+KA
Sbjct: 552 DPNAPKRAMSGFMFFSKLERENLKKTNPGIS-FTDVSRVLGEKWKKLSVEEKEPYEAKAR 610
Query: 111 KLKSEYGKKMNAYNKKQVTNL 131
+ K Y +++ Y Q N+
Sbjct: 611 EDKKRYKDEISGYKNPQPMNI 631
>gi|225681708|gb|EEH19992.1| nucleosome binding protein [Paracoccidioides brasiliensis Pb03]
Length = 103
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KKDPN PKR SA+ F E R ++ENP ++ VGK G +WK+++ ++APY
Sbjct: 17 EKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGIS-FGQVGKVLGERWKALNEKQRAPY 75
Query: 106 ESKAEKLKSEYGKKMNAYN 124
E+KA K Y + +YN
Sbjct: 76 EAKAAADKKRYEDEKASYN 94
>gi|354476918|ref|XP_003500670.1| PREDICTED: high mobility group protein B4-like [Cricetulus griseus]
Length = 180
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 30 ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
A AKLD ++ GKR K+ K+DP+ P++PPS+F +F + K +NPN + V
Sbjct: 62 ALAKLDKARYQEEMMNYMGKRRKRRKRDPHAPRQPPSSFLLFSLDHYAQLKHDNPNWSVV 121
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
V KA G W S +K PYE KA L+++Y + + Y K+
Sbjct: 122 Q-VAKATGKMWSMTSNVDKQPYEQKAALLRAKYFEDVENYRKQ 163
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
+PK S++ F+ +R FK++ PN + KW+S+S EKA YE+ A+
Sbjct: 8 RPKVNVSSYIHFMLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 113 KSEYGKKMNAY 123
K+ Y ++M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|295671102|ref|XP_002796098.1| nucleosome binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284231|gb|EEH39797.1| nucleosome binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 103
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KKDPN PKR SA+ F E R ++ENP ++ VGK G +WK+++ ++APY
Sbjct: 17 EKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGIS-FGQVGKVLGERWKALNEKQRAPY 75
Query: 106 ESKAEKLKSEYGKKMNAYN 124
E+KA K Y + +YN
Sbjct: 76 EAKAAADKKRYEDEKASYN 94
>gi|224072172|ref|XP_002303636.1| high mobility group family [Populus trichocarpa]
gi|222841068|gb|EEE78615.1| high mobility group family [Populus trichocarpa]
Length = 480
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
+ + ++ K +KDP KPK+P SAFF+F E R EN +V V K AG +WK+
Sbjct: 255 ADQEENSKKTKKEKDPLKPKQPLSAFFLFCNERRAALLAENKSVL---EVAKIAGEEWKN 311
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAY 123
M+ + PYE A+K + +Y ++M AY
Sbjct: 312 MTEKRRGPYEEVAKKNREKYMQEMEAY 338
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPK+P S+F +F +E RK+ E P + S + KWK ++ E+ + SKA
Sbjct: 394 DPNKPKKPASSFLLFSKETRKSLMDERPGINN-STLTAMISVKWKELNEEERQIWNSKAA 452
Query: 111 KLKSEYGKKMNAYNK 125
+ Y K++ Y+K
Sbjct: 453 EAMEAYKKELEEYSK 467
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 56 KRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSE 115
KRP + ++ + KKENP+ + G KWK+++ EK PYE K + K
Sbjct: 156 KRPCPPYSLWCKAQWNEVKKENPDA-EFKDISNILGAKWKTITAEEKKPYEEKYQAEKEA 214
Query: 116 YGKKM 120
Y K M
Sbjct: 215 YLKVM 219
>gi|193787044|dbj|BAG51867.1| unnamed protein product [Homo sapiens]
Length = 176
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 47 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 105
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 106 EKKAAKLKEKYEKDIAAYRAK 126
>gi|225556517|gb|EEH04805.1| non-histone chromosomal protein 6 [Ajellomyces capsulatus G186AR]
Length = 102
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KKDPN PKR SA+ F E R+ ++ENP ++ VGK G +WK+++ ++APY
Sbjct: 16 EKKKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKVLGERWKALNEKQRAPY 74
Query: 106 ESKAEKLKSEYGKKMNAYN 124
E+KA K Y + +YN
Sbjct: 75 EAKAAADKKRYEDEKASYN 93
>gi|348541671|ref|XP_003458310.1| PREDICTED: high mobility group-T protein-like [Oreochromis
niloticus]
Length = 206
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAFF+F EFR K E+P ++ + V K G W S + +K PYE KA
Sbjct: 91 DPNAPKRPPSAFFIFCSEFRPKVKGESPGLS-IGDVAKRLGEMWNSTAAEDKQPYEKKAA 149
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + AY K
Sbjct: 150 KLKEKYEKDIAAYRAK 165
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + + K +WK+MS EK +E
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A + K+ Y ++M Y
Sbjct: 63 ARQDKARYEREMMNY 77
>gi|255074119|ref|XP_002500734.1| high-mobility protein [Micromonas sp. RCC299]
gi|226515997|gb|ACO61992.1| high-mobility protein [Micromonas sp. RCC299]
Length = 153
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PK+P SA+ +F +E R ENP ++ ++ V K G +WK++ EK+ +E+KA+
Sbjct: 74 DPNAPKKPLSAYIIFTKERRSAVVAENPGLS-LTEVTKELGARWKAIGAEEKSVFEAKAK 132
Query: 111 KLKSEYGKKMNAYNKKQ 127
K K Y +M AY Q
Sbjct: 133 KDKERYAVEMEAYEATQ 149
>gi|238486744|ref|XP_002374610.1| nucleosome binding protein (Nhp6a), putative [Aspergillus flavus
NRRL3357]
gi|317144043|ref|XP_003189559.1| non-histone chromosomal protein 6 [Aspergillus oryzae RIB40]
gi|220699489|gb|EED55828.1| nucleosome binding protein (Nhp6a), putative [Aspergillus flavus
NRRL3357]
Length = 104
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 39 KRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
K +G R ++ KKDPN PKR SA+ F + R+ ++ENP ++ VGK G KWK++S
Sbjct: 9 KTKGTRVERKKKDPNAPKRGLSAYMFFANDNREKVREENPGIS-FGQVGKMLGEKWKALS 67
Query: 99 PAEKAPYESKAEKLKSEY 116
A++ PYE KA K Y
Sbjct: 68 EADRRPYEDKAAADKKRY 85
>gi|148696675|gb|EDL28622.1| mCG11166 [Mus musculus]
Length = 160
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 43 NAPKRPPSAFFLFCSENRPKIKIEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 101
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 102 KEKYEKDIAAYRAK 115
>gi|159476440|ref|XP_001696319.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158282544|gb|EDP08296.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 179
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PK+P ++F F R++ K ENP + A VGK G KWK +S +K Y+ KA
Sbjct: 57 DPNAPKKPLTSFMYFSNAIRESVKSENPGI-AFGEVGKVIGEKWKGLSADDKKEYDEKAA 115
Query: 111 KLKSEYGKKMNAY 123
K K Y K+M +Y
Sbjct: 116 KDKERYQKEMESY 128
>gi|340923867|gb|EGS18770.1| hypothetical protein CTHT_0053790 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 576
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 66/113 (58%), Gaps = 8/113 (7%)
Query: 13 SQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKT 72
SQ+A+K ++K R+ T + +KR+ +R K D N P+RPPSA+ +F + R+
Sbjct: 82 SQDAVKSENQKGDGREPVTMIV---TKRKYRRHPK--PDENAPERPPSAYVLFANKMRED 136
Query: 73 FKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
K N + T ++ K G W++++P EK PYE++A++ K +Y ++ Y K
Sbjct: 137 LKGRNLSFTEMA---KLVGENWQNLTPEEKEPYETQAQRCKDKYLAELAEYKK 186
>gi|345319487|ref|XP_001520125.2| PREDICTED: TOX high mobility group box family member 3-like
[Ornithorhynchus anatinus]
Length = 780
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E ++R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 414 KSATPSPSSSINEEDADESNRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 469
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 470 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 528
Query: 122 AYNKKQV 128
AY V
Sbjct: 529 AYRASLV 535
>gi|328350132|emb|CCA36532.1| Hepatocyte growth factor-regulated tyrosine kinase substrate
[Komagataella pastoris CBS 7435]
Length = 725
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKR SA+ F E R + ENP + +GK G KWK++ KAPYESK
Sbjct: 643 KKDPNAPKRSLSAYMFFANEQRDIVRSENPGIQ-FGEIGKLLGEKWKALDAEGKAPYESK 701
Query: 109 AEKLKSEYGKKMNAYNKKQ 127
AE+ K Y + Y KKQ
Sbjct: 702 AEEDKKRYELEKAEYFKKQ 720
>gi|348525338|ref|XP_003450179.1| PREDICTED: high mobility group-T protein-like isoform 1
[Oreochromis niloticus]
Length = 200
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
++KK KDPN PKRPPSAFF+F +FR K E P ++ + K G W S S EK
Sbjct: 83 QKKKRFKDPNAPKRPPSAFFLFCADFRPKIKSEYPGLS-IGDTAKKLGEMWNSSSAEEKQ 141
Query: 104 PYESKAEKLKSEYGKKMNAYNKK 126
PYE KA KLK +Y K + AY K
Sbjct: 142 PYEKKAAKLKEKYDKDIVAYRTK 164
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P+ + S K +WK+MSP EK +E
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 63 AKQDKLRYEREMKNY 77
>gi|366998295|ref|XP_003683884.1| hypothetical protein TPHA_0A03740 [Tetrapisispora phaffii CBS 4417]
gi|357522179|emb|CCE61450.1| hypothetical protein TPHA_0A03740 [Tetrapisispora phaffii CBS 4417]
Length = 93
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R K ENP+V+ VG+ G KWK+++ EK P+E+KAE
Sbjct: 17 DPNAPKRALSAYMFFANETRDIVKAENPDVS-FGQVGRILGEKWKALTAEEKIPFEAKAE 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKALYN 89
>gi|5815432|gb|AAD52670.1|AF178849_1 high mobility group protein HMG1 [Gallus gallus]
Length = 214
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y K+M Y
Sbjct: 62 DMAKADKLRYEKEMKNY 78
>gi|74185387|dbj|BAE30167.1| unnamed protein product [Mus musculus]
Length = 181
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSENRPKIKIEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|380083124|gb|AFD33645.1| high mobility group box 1, partial [Gallus gallus]
Length = 185
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y K+M Y
Sbjct: 62 DMAKADKLRYEKEMKNY 78
>gi|45382473|ref|NP_990233.1| high mobility group protein B1 [Gallus gallus]
gi|326914268|ref|XP_003203448.1| PREDICTED: high mobility group protein B1-like [Meleagris
gallopavo]
gi|4140289|emb|CAA76978.1| high mobility group 1 protein [Gallus gallus]
gi|60098903|emb|CAH65282.1| hypothetical protein RCJMB04_15a21 [Gallus gallus]
Length = 215
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y K+M Y
Sbjct: 62 DMAKADKLRYEKEMKNY 78
>gi|6680229|ref|NP_032278.1| high mobility group protein B2 [Mus musculus]
gi|1708259|sp|P30681.3|HMGB2_MOUSE RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|609169|emb|CAA86727.1| high mobility group 2 protein [Mus musculus]
gi|12834643|dbj|BAB22988.1| unnamed protein product [Mus musculus]
gi|12842629|dbj|BAB25672.1| unnamed protein product [Mus musculus]
gi|12849395|dbj|BAB28323.1| unnamed protein product [Mus musculus]
gi|52789313|gb|AAH83108.1| High mobility group box 2 [Mus musculus]
gi|55777186|gb|AAH46759.1| High mobility group box 2 [Mus musculus]
gi|74179666|dbj|BAE22481.1| unnamed protein product [Mus musculus]
gi|74179668|dbj|BAE22482.1| unnamed protein product [Mus musculus]
gi|74226660|dbj|BAE26982.1| unnamed protein product [Mus musculus]
Length = 210
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSENRPKIKIEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|11527222|gb|AAG36939.1|AF267733_1 high mobility group protein B2 [Mus musculus]
gi|12805183|gb|AAH02050.1| High mobility group box 2 [Mus musculus]
gi|74150328|dbj|BAE32214.1| unnamed protein product [Mus musculus]
gi|148672860|gb|EDL04807.1| mCG4647 [Mus musculus]
Length = 210
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSENRPKIKIEHPGLS-IGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|302828472|ref|XP_002945803.1| hypothetical protein VOLCADRAFT_72419 [Volvox carteri f.
nagariensis]
gi|300268618|gb|EFJ52798.1| hypothetical protein VOLCADRAFT_72419 [Volvox carteri f.
nagariensis]
Length = 199
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PK+ +AF F R K +NP V+ VGK G KWKS+ EK+ YE KA
Sbjct: 76 KDPNAPKKNLTAFMYFSNAQRDKVKTDNPGVS-FGEVGKLLGEKWKSLGANEKSEYEEKA 134
Query: 110 EKLKSEYGKKMNAY 123
+K K Y K+M AY
Sbjct: 135 KKDKERYAKEMEAY 148
>gi|340992807|gb|EGS23362.1| hypothetical protein CTHT_0010300 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 104
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R ++ENP ++ VGK G +WK+++ ++APYE+KA
Sbjct: 21 DPNAPKRGLSAYMFFANEQRDNVREENPGIS-FGQVGKILGERWKALTDKQRAPYEAKAA 79
Query: 111 KLKSEYGKKMNAYN 124
K Y + AYN
Sbjct: 80 ADKKRYEDEKQAYN 93
>gi|308238179|ref|NP_001184126.1| structure specific recognition protein 1 [Xenopus (Silurana)
tropicalis]
Length = 695
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKRP SA+ ++L R+ K ENP + +++ + K AG WKSMS +K ++ +AE
Sbjct: 537 DPSAPKRPMSAYMLWLNASREKIKSENPGI-SITDLSKKAGEIWKSMSKDKKEEWDRRAE 595
Query: 111 KLKSEYGKKMNAYN 124
+ K +Y K M YN
Sbjct: 596 EAKRDYEKAMKEYN 609
>gi|224043266|ref|XP_002194652.1| PREDICTED: high mobility group protein B1 [Taeniopygia guttata]
Length = 215
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y K+M Y
Sbjct: 62 DMAKADKLRYEKEMKNY 78
>gi|389626627|ref|XP_003710967.1| non-histone chromosomal protein 6 [Magnaporthe oryzae 70-15]
gi|78192124|gb|ABB30152.1| nonhistone protein 6 [Magnaporthe grisea]
gi|291195731|gb|ADD84582.1| nonhistone chromosomal protein 6B [Magnaporthe oryzae]
gi|351650496|gb|EHA58355.1| non-histone chromosomal protein 6 [Magnaporthe oryzae 70-15]
gi|440463464|gb|ELQ33044.1| nucleosome binding protein [Magnaporthe oryzae Y34]
gi|440481294|gb|ELQ61893.1| nucleosome binding protein [Magnaporthe oryzae P131]
Length = 101
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
++AKKDP PKR SA+ F E R ++ENP VT VGK G +WK++S ++APY
Sbjct: 15 RRAKKDPMAPKRGLSAYMFFANEQRDNVREENPGVT-FGQVGKILGERWKALSDKQRAPY 73
Query: 106 ESKAEKLKSEYGKKMNAYN 124
++KA K Y + AY
Sbjct: 74 DAKAAADKKRYEDEKAAYQ 92
>gi|444732714|gb|ELW72989.1| Enkurin [Tupaia chinensis]
Length = 362
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + K G W + + EK PY
Sbjct: 86 KKKSKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDAAKKLGEMWNNTAADEKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYGAK 165
>gi|428163656|gb|EKX32716.1| FACT complex subunit ssrp1 [Guillardia theta CCMP2712]
Length = 746
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
+ KKDPN PKRP SA+ +F + R+ KENP++ GK + WK++S EK P+E
Sbjct: 544 RQKKDPNAPKRPKSAWLLFCDAKREDIVKENPDIKFTEVNGKIS-EIWKNLSSDEKKPFE 602
Query: 107 SKAEKLKSEYGKKMNAYNKK 126
+A KL S+Y + Y+K+
Sbjct: 603 EEAAKLASKYKEDKAKYDKE 622
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR +A+ ++ +E R+ +K NP++ + AV + G KWK + EK +E KA
Sbjct: 650 DPNAPKRGQNAYMLWSQEAREKMRKANPDL-PMKAVMQQLGEKWKEIDAEEKKEWEEKAR 708
Query: 111 KLKSEYGKKMNAYNKK 126
+ K + ++ Y KK
Sbjct: 709 EDKERFKRETEEYKKK 724
>gi|302847869|ref|XP_002955468.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
gi|300259310|gb|EFJ43539.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
Length = 645
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K+E+K K DPN PK+ + F F R+ K ENP + A +GK G +WK M EK
Sbjct: 544 KKERKPK-DPNAPKKNLTGFMYFSNANREKVKAENPGI-AFGEIGKMLGERWKGMGADEK 601
Query: 103 APYESKAEKLKSEYGKKMNAYNKK 126
APYE A K K Y + M AY ++
Sbjct: 602 APYEQMAAKDKVRYAEAMKAYKER 625
>gi|156843619|ref|XP_001644876.1| hypothetical protein Kpol_1065p34 [Vanderwaltozyma polyspora DSM
70294]
gi|156115528|gb|EDO17018.1| hypothetical protein Kpol_1065p34 [Vanderwaltozyma polyspora DSM
70294]
Length = 93
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R K ENP+V+ VG+ G KWK+M+ +K P+++KAE
Sbjct: 17 DPNAPKRALSAYMFFANETRDIVKAENPDVS-FGQVGRILGEKWKAMTDEDKQPFDAKAE 75
Query: 111 KLKSEYGKKMNAYN 124
K Y + YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|49250826|gb|AAH74541.1| Ssrp1 protein, partial [Xenopus (Silurana) tropicalis]
Length = 629
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKRP SA+ ++L R+ K ENP + +++ + K AG WKSMS +K ++ +AE
Sbjct: 537 DPSAPKRPMSAYMLWLNASREKIKSENPGI-SITDLSKKAGEIWKSMSKDKKEEWDRRAE 595
Query: 111 KLKSEYGKKMNAYN 124
+ K +Y K M YN
Sbjct: 596 EAKRDYEKAMKEYN 609
>gi|339715208|ref|NP_001092721.2| high-mobility group box 1b [Danio rerio]
Length = 197
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F ++R K ENP ++ + + K G W S S K PY
Sbjct: 85 KKRFKDPNAPKRPPSAFFIFCGDYRPKIKGENPGLS-IGDIAKKLGEMWNSSSAEVKQPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKKQVTNL 131
E KA KLK +Y K + Y K +
Sbjct: 144 EKKAAKLKEKYDKDIALYRTKGIAGF 169
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y ++M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|270014157|gb|EFA10605.1| hypothetical protein TcasGA2_TC012866 [Tribolium castaneum]
Length = 840
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 44 REKKAKK--DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
R+K+AKK D NKPKRP +AF ++L E R K +NP + ++ + K G WK + +
Sbjct: 668 RQKRAKKSKDENKPKRPSTAFMLWLNEMRDKIKADNPGI-KITEIAKKGGEMWKELK--D 724
Query: 102 KAPYESKAEKLKSEYGKKMNAY 123
K+ +E KA K K EY K M Y
Sbjct: 725 KSEWEGKAAKAKEEYNKAMKEY 746
>gi|27502780|gb|AAH42502.1| Ssrp1 protein [Mus musculus]
Length = 711
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 7/108 (6%)
Query: 20 NDRKVGKR----KAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKK 75
+DR+ KR +A AK D S+R+ KK K DPN PKRP SA+ ++L R+ K
Sbjct: 510 SDREEKKREQLKRAKMAK-DRKSRRKSSEAKKGK-DPNAPKRPMSAYMLWLNASREKIKS 567
Query: 76 ENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
++P + +++ + K AG WK MS +K ++ KAE + EY K M Y
Sbjct: 568 DHPGI-SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|312281655|dbj|BAJ33693.1| unnamed protein product [Thellungiella halophila]
Length = 646
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR S F F + R KK +P + A VGK G KW+ MS EK PYE+KA+
Sbjct: 558 DPNAPKRAMSGFMFFSQMERDNIKKTHPGI-AFGEVGKVLGDKWRQMSAEEKEPYEAKAQ 616
Query: 111 KLKSEYGKKMNAYNKKQ 127
K Y +++ Y Q
Sbjct: 617 VDKKRYKDEISDYKNPQ 633
>gi|402077455|gb|EJT72804.1| non-histone chromosomal protein 6 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 101
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
++ KKDP PKR SA+ F E R+ ++ENP V+ VGK G +WK++S ++APY
Sbjct: 15 RRGKKDPLAPKRGLSAYMFFANEQRENVREENPGVS-FGQVGKILGERWKALSDKQRAPY 73
Query: 106 ESKAEKLKSEYGKKMNAYN 124
++KA K Y + AYN
Sbjct: 74 DAKAAADKKRYEDEKAAYN 92
>gi|351698285|gb|EHB01204.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 215
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDITAYRAK 165
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ + KK++P+ + S K +WK++S EK +E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCGEDHKKKHPDASVNFSEFSKKGSERWKTISAEEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|225452706|ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis vinifera]
gi|296082859|emb|CBI22160.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR S F F + R+ KK P + A + VG+ G KWK M+ EK PYE+KA+
Sbjct: 555 DPNAPKRAMSGFMFFSQTERENIKKSTPGI-AFTEVGRVLGDKWKKMTAEEKEPYEAKAQ 613
Query: 111 KLKSEYGKKMNAY 123
K Y +++ Y
Sbjct: 614 ADKKRYRDEISGY 626
>gi|147866286|emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera]
Length = 644
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR S F F + R+ KK P + A + VG+ G KWK M+ EK PYE+KA+
Sbjct: 555 DPNAPKRAMSGFMFFSQTERENIKKSTPGI-AFTEVGRVLGDKWKKMTAEEKEPYEAKAQ 613
Query: 111 KLKSEYGKKMNAY 123
K Y +++ Y
Sbjct: 614 ADKKRYRDEISGY 626
>gi|126333240|ref|XP_001376238.1| PREDICTED: FACT complex subunit SSRP1 [Monodelphis domestica]
Length = 712
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EGKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAYNK 125
++ KAE+ K EY K M Y++
Sbjct: 596 WDRKAEEAKREYEKAMKEYSE 616
>gi|296199401|ref|XP_002747150.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 209
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PKR PSAFF+F E K E+P ++ V V K G W + + +K PYE KA
Sbjct: 96 KDPNAPKRFPSAFFLFCSECYPKIKGEHPGLS-VGDV-KKLGEMWSNTAAGDKQPYEKKA 153
Query: 110 EKLKSEYGKKMNAYNKK 126
KL+ +YG+++ AY K
Sbjct: 154 AKLRKKYGRELAAYGAK 170
>gi|50421411|ref|XP_459256.1| DEHA2D17710p [Debaryomyces hansenii CBS767]
gi|74631679|sp|Q6BRB4.1|NHP6_DEBHA RecName: Full=Non-histone chromosomal protein 6
gi|49654923|emb|CAG87430.1| DEHA2D17710p [Debaryomyces hansenii CBS767]
Length = 92
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKR SA+ F E R + ENP ++ VGK G KWK+++P +K PYE+KA+
Sbjct: 15 DPDAPKRSLSAYMFFANENRDIVRAENPGIS-FGQVGKLLGEKWKALTPEDKIPYENKAD 73
Query: 111 KLKSEYGKKMNAYNKK 126
K Y K+ Y KK
Sbjct: 74 TDKKRYEKEKAEYAKK 89
>gi|116283314|gb|AAH04848.1| Ssrp1 protein [Mus musculus]
Length = 633
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 27 RKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAV 86
++A AK D S+R+ KK K DPN PKRP SA+ ++L R+ K ++P + +++ +
Sbjct: 521 KRAKMAK-DRKSRRKSSEAKKGK-DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDL 577
Query: 87 GKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
K AG WK MS +K ++ KAE + EY K M Y
Sbjct: 578 SKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|111154063|ref|NP_892035.2| FACT complex subunit SSRP1 [Mus musculus]
gi|209862973|ref|NP_001129553.1| FACT complex subunit SSRP1 [Mus musculus]
gi|110283006|sp|Q08943.2|SSRP1_MOUSE RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; AltName: Full=T160
gi|74138726|dbj|BAE27178.1| unnamed protein product [Mus musculus]
gi|74144584|dbj|BAE27280.1| unnamed protein product [Mus musculus]
gi|74144625|dbj|BAE27299.1| unnamed protein product [Mus musculus]
gi|74177273|dbj|BAE34555.1| unnamed protein product [Mus musculus]
Length = 708
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 7/108 (6%)
Query: 20 NDRKVGKR----KAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKK 75
+DR+ KR +A AK D S+R+ KK K DPN PKRP SA+ ++L R+ K
Sbjct: 510 SDREEKKREQLKRAKMAK-DRKSRRKSSEAKKGK-DPNAPKRPMSAYMLWLNASREKIKS 567
Query: 76 ENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
++P + +++ + K AG WK MS +K ++ KAE + EY K M Y
Sbjct: 568 DHPGI-SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|169869341|ref|XP_001841237.1| hypothetical protein CC1G_11400 [Coprinopsis cinerea okayama7#130]
gi|116497705|gb|EAU80600.1| hypothetical protein CC1G_11400 [Coprinopsis cinerea okayama7#130]
Length = 255
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRP S++ +F E R K++NPN+T + KWK+M+ +K Y +
Sbjct: 73 DPNAPKRPASSYILFQNEVRNELKRQNPNLTNPELL-TLISEKWKNMTDEQKETYNQQML 131
Query: 111 KLKSEYGKKMNAYNKK 126
K K EY + NAY+ +
Sbjct: 132 KAKEEYSQAKNAYDNR 147
>gi|395544035|ref|XP_003773918.1| PREDICTED: FACT complex subunit SSRP1 [Sarcophilus harrisii]
Length = 712
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EGKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKDKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAYNK 125
++ KAE+ K EY K M Y++
Sbjct: 596 WDRKAEEAKREYEKAMKEYSE 616
>gi|91091374|ref|XP_973014.1| PREDICTED: similar to AGAP012335-PA [Tribolium castaneum]
Length = 712
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 44 REKKAKK--DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
R+K+AKK D NKPKRP +AF ++L E R K +NP + ++ + K G WK + +
Sbjct: 540 RQKRAKKSKDENKPKRPSTAFMLWLNEMRDKIKADNPGI-KITEIAKKGGEMWKELK--D 596
Query: 102 KAPYESKAEKLKSEYGKKMNAY 123
K+ +E KA K K EY K M Y
Sbjct: 597 KSEWEGKAAKAKEEYNKAMKEY 618
>gi|302851253|ref|XP_002957151.1| hypothetical protein VOLCADRAFT_77427 [Volvox carteri f.
nagariensis]
gi|300257558|gb|EFJ41805.1| hypothetical protein VOLCADRAFT_77427 [Volvox carteri f.
nagariensis]
Length = 94
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
REKK K DPN PK+P A+ F ++ R+ K ENP ++ V+ +GK G WK +S +K
Sbjct: 14 REKKVK-DPNAPKKPLGAYMWFCKDMRERVKAENPGMS-VTDIGKRLGELWKEVSEEDKK 71
Query: 104 PYESKAEKLKSEYGKKMNAYNKK 126
Y +AE K Y K+ AYNK+
Sbjct: 72 KYLKQAEDDKERYNKEAAAYNKE 94
>gi|225706046|gb|ACO08869.1| High mobility group-T protein [Osmerus mordax]
Length = 204
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F +FR K E P +T + V K G W +K PY
Sbjct: 85 KKRFKDPNAPKRPPSAFFIFCADFRAKVKGETPGLT-IGDVAKKLGEMWNGTCAEDKQPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKAAKLKEKYEKDIAAYRAK 164
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 AKLDKVRYEREMKNY 77
>gi|444515932|gb|ELV11007.1| High mobility group protein B3 [Tupaia chinensis]
Length = 212
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN P+RPPS F +F EF K NP ++ + V K W + S +EK PY +KA
Sbjct: 89 DPNAPERPPSGFLLFCSEFHLKIKSTNPGIS-IGDVAKKLVEMWNNFSDSEKQPYITKAA 147
Query: 111 KLKSEYGKKMNAYNKK 126
KLK +Y K + Y K
Sbjct: 148 KLKEKYKKDVANYKSK 163
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNV-TAVSAVGKAAGGKWKSMSPAEKAPYE 106
AK DP KPK S + F++ R+ KK+NP V + K +WK+MS EK+ ++
Sbjct: 2 AKSDPKKPKGKVSTYAFFVQTCREEHKKKNPEVPINFTEFSKKCSKRWKTMSGKEKSKFD 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y +M Y
Sbjct: 62 EMAKADKIRYDWEMKDY 78
>gi|50548527|ref|XP_501733.1| YALI0C11671p [Yarrowia lipolytica]
gi|74635076|sp|Q6CC79.1|NHP6_YARLI RecName: Full=Non-histone chromosomal protein 6
gi|49647600|emb|CAG82043.1| YALI0C11671p [Yarrowia lipolytica CLIB122]
Length = 103
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F + R + +NP + A VGKA G KWK+++ AEK PYE KA
Sbjct: 21 DPNAPKRALSAYMFFANDNRDAIRADNPGI-AFGQVGKALGEKWKTLTDAEKVPYEEKAT 79
Query: 111 KLKSEYGKKMNAY 123
K Y + AY
Sbjct: 80 ADKKRYEDEKAAY 92
>gi|29290594|emb|CAD83017.1| bM168F16.1 (novel protein similar to high-mobility group box 1
(Hmgb1)) [Mus musculus]
gi|148699130|gb|EDL31077.1| mCG49535 [Mus musculus]
Length = 208
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKR PSAFF+F E+ K E+P ++ + V K G W + + +K P
Sbjct: 86 KKKFKDPNAPKRSPSAFFLFCSEYCHKIKGEHPGLS-IGVVAKKLGEMWINTAVYDKQPC 144
Query: 106 ESKAEKLKSEYGKKMNA 122
E KA KLK +Y K + A
Sbjct: 145 EKKATKLKEKYEKDIAA 161
>gi|432102789|gb|ELK30264.1| High mobility group protein B1 [Myotis davidii]
Length = 245
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|57524786|ref|NP_001005796.1| FACT complex subunit SSRP1 [Gallus gallus]
gi|110283005|sp|Q04678.2|SSRP1_CHICK RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; AltName: Full=T160
gi|53128417|emb|CAG31300.1| hypothetical protein RCJMB04_4n20 [Gallus gallus]
Length = 706
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+ + E K KDPN PKRP SA+ ++L R+ K ++P ++ ++ + K AG WK+MS
Sbjct: 530 RKKQVESKKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGIS-ITDLSKKAGELWKAMSK 588
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYN 124
+K ++ KAE K +Y K M Y+
Sbjct: 589 EKKEEWDRKAEDAKRDYEKAMKEYS 613
>gi|326920276|ref|XP_003206400.1| PREDICTED: FACT complex subunit SSRP1-like [Meleagris gallopavo]
Length = 706
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+ + E K KDPN PKRP SA+ ++L R+ K ++P ++ ++ + K AG WK+MS
Sbjct: 530 RKKQVESKKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGIS-ITDLSKKAGELWKAMSK 588
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYN 124
+K ++ KAE K +Y K M Y+
Sbjct: 589 EKKEEWDRKAEDAKRDYEKAMKEYS 613
>gi|218117885|dbj|BAH03305.1| structure-specific recognition protein 1 [Gallus gallus]
Length = 706
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+ + E K KDPN PKRP SA+ ++L R+ K ++P ++ ++ + K AG WK+MS
Sbjct: 530 RKKQVESKKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGIS-ITDLSKKAGELWKAMSK 588
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYN 124
+K ++ KAE K +Y K M Y+
Sbjct: 589 EKKEEWDRKAEDAKRDYEKAMKEYS 613
>gi|444731734|gb|ELW72082.1| High mobility group protein B1 [Tupaia chinensis]
Length = 221
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P + + V K G W + + EK PY
Sbjct: 80 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-PIGDVAKKLGEMWINTAADEKQPY 138
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 139 EKKAAKLKEKYEKDIAAYQAK 159
>gi|444716453|gb|ELW57303.1| High mobility group protein B1 [Tupaia chinensis]
Length = 213
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K E K KDPN PKRPPSAFF+F E+R +E+P ++ + V K W +++ K
Sbjct: 70 KGETKKFKDPNAPKRPPSAFFLFCSEYRPKI-REHPGLS-IGDVAKKLEEMWNNIAADGK 127
Query: 103 APYESKAEKLKSEYGKKMNAYNKKQVTN 130
YE KA KLK +Y K + A+ K N
Sbjct: 128 QSYEKKAAKLKGKYRKDITAFQGKGTAN 155
>gi|392563521|gb|EIW56700.1| HMG-box [Trametes versicolor FP-101664 SS1]
gi|392563525|gb|EIW56704.1| HMG-box [Trametes versicolor FP-101664 SS1]
gi|392563535|gb|EIW56714.1| HMG-box [Trametes versicolor FP-101664 SS1]
Length = 116
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 23 KVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA 82
K KR+AAT K D K +GK KDP PKR SA+ F +++R+ K ENP+
Sbjct: 7 KTTKRRAAT-KQDKAPKAKGK------KDPKAPKRALSAYMFFSQDWRERIKAENPDA-G 58
Query: 83 VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQV 128
+GK G KWK + EK PY +A KS ++ NAY+ K+
Sbjct: 59 FGEIGKLLGAKWKELDDDEKKPYLDQAAADKSRAEEEKNAYDGKKA 104
>gi|296418046|ref|XP_002838655.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634611|emb|CAZ82846.1| unnamed protein product [Tuber melanosporum]
Length = 103
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKR SA+ F E R+ + +NP + A VGK G +WK++S ++ PYE+K
Sbjct: 17 KKDPNAPKRGLSAYMFFANEQRENVRNDNPGI-AFGQVGKVLGERWKALSEKQRQPYEAK 75
Query: 109 AEKLKSEYGKKMNAYN 124
A K Y + AYN
Sbjct: 76 AAADKKRYEDEKAAYN 91
>gi|8170740|gb|AAB19500.2| HMG1-related DNA-binding protein [Mus sp.]
Length = 708
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 7/108 (6%)
Query: 20 NDRKVGKR----KAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKK 75
+DR+ KR +A AK D S+R+ KK K DPN PKRP SA+ ++L R+ K
Sbjct: 510 SDREEKKREQLKRAKMAK-DRKSRRKSSEAKKGK-DPNAPKRPMSAYMLWLNASREKIKS 567
Query: 76 ENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
++P + +++ + K AG WK MS +K ++ KAE + EY K M Y
Sbjct: 568 DHPGI-SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|322797840|gb|EFZ19748.1| hypothetical protein SINV_09636 [Solenopsis invicta]
Length = 203
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KD N PKR SAFF F + R K NP V + K G KW P K+ Y
Sbjct: 92 RKHIKDHNAPKRSLSAFFWFCNDERGKVKMLNPEY-GVGDIAKELGKKWSDADPETKSKY 150
Query: 106 ESKAEKLKSEYGKKMNAYNKKQVTNLVPFFNSVDAFGSLL 145
E+ AEK K+ Y ++M AY KK + P A +++
Sbjct: 151 EAMAEKDKARYEREMTAYKKKMQNDGAPMVGGAQANQTII 190
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAV-SAVGKAAGGKWKSMSPAEKAPYESKAEK 111
+KP+ +A+ F++ R+ KK++P V K +WK+MS EK + AEK
Sbjct: 7 SKPRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDIEKKRFHEMAEK 66
Query: 112 LKSEYGKKMNAYN 124
K Y +M Y
Sbjct: 67 DKKRYDTEMQNYT 79
>gi|126274287|ref|XP_001387507.1| Nonhistone chromosomal protein 6A [Scheffersomyces stipitis CBS
6054]
gi|126213377|gb|EAZ63484.1| Nonhistone chromosomal protein 6A, partial [Scheffersomyces
stipitis CBS 6054]
Length = 85
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDP+ PKR SA+ F E R + ENP ++ VGK G KWK+++ EK PYE+K
Sbjct: 12 KKDPDAPKRSLSAYMFFANENRDIVRAENPGIS-FGQVGKLLGEKWKALTGEEKGPYENK 70
Query: 109 AEKLKSEYGKKMNAY 123
AE K Y K+ Y
Sbjct: 71 AEADKKRYEKEKAEY 85
>gi|395542387|ref|XP_003773114.1| PREDICTED: high mobility group protein B2 isoform 1 [Sarcophilus
harrisii]
gi|395542389|ref|XP_003773115.1| PREDICTED: high mobility group protein B2 isoform 2 [Sarcophilus
harrisii]
Length = 207
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE K KL
Sbjct: 93 NAPKRPPSAFFLFCAEHRPKIKSEHPGLS-IGDTAKKLGELWSEQSAKDKLPYEQKVAKL 151
Query: 113 KSEYGKKMNAY 123
K +Y K + AY
Sbjct: 152 KEKYEKDIAAY 162
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSPVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKGDKARYDREMKNY 78
>gi|126331239|ref|XP_001365344.1| PREDICTED: high mobility group protein B2-like [Monodelphis
domestica]
Length = 207
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE K KL
Sbjct: 93 NAPKRPPSAFFLFCAEHRPKIKSEHPGLS-IGDTAKKLGELWSEQSAKDKLPYEQKVAKL 151
Query: 113 KSEYGKKMNAY 123
K +Y K + AY
Sbjct: 152 KEKYEKDIAAY 162
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSPVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKGDKARYDREMKNY 78
>gi|148673911|gb|EDL05858.1| mCG144566 [Mus musculus]
Length = 240
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 111 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 169
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 170 EKKAAKLKEKYEKDIAAYRAK 190
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 28 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 87
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 88 MAKADKARYEREMKTY 103
>gi|112491006|pdb|2GZK|A Chain A, Structure Of A Complex Of Tandem Hmg Boxes And Dna
Length = 159
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+G+ +KK K DPN PKRPPSAFF+F E+R K E+P ++ + V K G W + +
Sbjct: 75 RKGETKKKFK-DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAA 132
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYNKK 126
+K PYE KA KLK +Y K + AY K
Sbjct: 133 DDKQPYEKKAAKLKEKYEKDIAAYRAK 159
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
++ KRP +AF V+ + R+ ENP + S + K G +WK ++ AEK P+ +A+KL
Sbjct: 3 DRVKRPMNAFIVWSRDQRRKMALENPRMRN-SEISKQLGYQWKMLTEAEKWPFFQEAQKL 61
Query: 113 KSEYGKKMNAY 123
++ + +K Y
Sbjct: 62 QAMHREKYPNY 72
>gi|149236976|ref|XP_001524365.1| hypothetical protein LELG_04337 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451900|gb|EDK46156.1| hypothetical protein LELG_04337 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 93
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKR SA+ F E R + ENP +T VGK G KWK++ +K PYE+KAE
Sbjct: 16 DPDAPKRSLSAYMFFANENRDIVRAENPGIT-FGQVGKLLGEKWKALGSEDKVPYENKAE 74
Query: 111 KLKSEYGKKMNAYNKK 126
K Y K+ Y KK
Sbjct: 75 ADKKRYEKEKAEYAKK 90
>gi|344243983|gb|EGW00087.1| High mobility group protein B4 [Cricetulus griseus]
Length = 106
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GKR K+ K+DP+ P++PPS+F +F + K +NPN + V V KA G W S +
Sbjct: 6 GKRRKRRKRDPHAPRQPPSSFLLFSLDHYAQLKHDNPNWSVVQ-VAKATGKMWSMTSNVD 64
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKK 126
K PYE KA L+++Y + + Y K+
Sbjct: 65 KQPYEQKAALLRAKYFEDVENYRKQ 89
>gi|395520861|ref|XP_003764541.1| PREDICTED: high mobility group protein B1 [Sarcophilus harrisii]
Length = 230
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 100 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 158
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 159 EKKAAKLKEKYEKDIAAYRAK 179
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAP 104
K K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK
Sbjct: 14 KMGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGK 73
Query: 105 YESKAEKLKSEYGKKMNAY 123
+E A+ K Y ++M Y
Sbjct: 74 FEDMAKADKVRYEREMKTY 92
>gi|340713595|ref|XP_003395326.1| PREDICTED: FACT complex subunit Ssrp1-like [Bombus terrestris]
Length = 735
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
+KD NKPKRPP+AF ++L R+ K ENP + AV+ + K G W+ + +K+ +E K
Sbjct: 543 EKDANKPKRPPTAFMIWLNSARERIKAENPGI-AVTEIAKKGGEMWRELK--DKSEWEQK 599
Query: 109 AEKLKSEYGKKMNAY 123
A K K EY M Y
Sbjct: 600 AAKAKKEYTASMKEY 614
>gi|335892930|gb|AEH59760.1| high mobility group box 2 [Lethenteron camtschaticum]
Length = 194
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+ KDPN PKRPPSAFFVF E R K ++P + + + K G W ++P K+PY
Sbjct: 84 KRKTKDPNAPKRPPSAFFVFCSEHRPKVKADHPGL-GIGEIAKRLGEMWGLLTPETKSPY 142
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 143 EKKAAKLKEKYEKDVAAYRGK 163
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K +P KP+ S++ F++ R+ KK++P + + K +WK+MSP EKA +E
Sbjct: 3 KGEPGKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSPKEKARFEE 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYDREMKNY 78
>gi|402882719|ref|XP_003904882.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Papio anubis]
Length = 132
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 31 TAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAA 90
T + D G + GK K DPN PKRP S FF+F EF K NP ++ + V K
Sbjct: 11 TERKDYGPAKGGK-----KNDPNAPKRPLSGFFLFCSEFHPKMKSTNPGIS-IGDVAKKL 64
Query: 91 GGKWKSMSPAEKAPYESKAEKL 112
G WK+++ +EK PY +K KL
Sbjct: 65 GEMWKNLNDSEKQPYVTKVAKL 86
>gi|350409390|ref|XP_003488719.1| PREDICTED: FACT complex subunit Ssrp1-like [Bombus impatiens]
Length = 736
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
+KD NKPKRPP+AF ++L R+ K ENP + AV+ + K G W+ + +K+ +E K
Sbjct: 543 EKDANKPKRPPTAFMIWLNSARERIKAENPGI-AVTEIAKKGGEMWRELK--DKSEWEQK 599
Query: 109 AEKLKSEYGKKMNAY 123
A K K EY M Y
Sbjct: 600 AAKAKKEYTASMKEY 614
>gi|242064692|ref|XP_002453635.1| hypothetical protein SORBIDRAFT_04g009610 [Sorghum bicolor]
gi|241933466|gb|EES06611.1| hypothetical protein SORBIDRAFT_04g009610 [Sorghum bicolor]
Length = 488
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
+P SA+FV+ +E R E NV +GK G +WK+M+ A+KAPYE A K K EY
Sbjct: 290 QPMSAYFVYSQERRAALVAEKKNV---PEIGKITGEEWKNMTEAQKAPYEKVARKQKEEY 346
Query: 117 GKKMNAYNKKQV 128
K+M Y +K++
Sbjct: 347 QKQMEVYKQKKI 358
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
RQ K+++ A DPN+PKRP S+F +F +E RK +E P + S++ KWK +S
Sbjct: 400 RQKKKQENA--DPNRPKRPASSFLLFSKEARKQLLEERPGINN-SSLNALISVKWKELSG 456
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYNKKQVTN 130
E+ + +KA + Y K+M Y K Q ++
Sbjct: 457 EERQAWNAKAAPAMAAYKKEMEEYTKAQSSS 487
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 56 KRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSE 115
K+P A+ ++L++ K+ENP V G KWK++S EK PYE + + K
Sbjct: 166 KKPCPAYVLWLKDQWTEVKEENPEAD-FKEVSSTLGTKWKALSAEEKQPYEERYRQEKEA 224
Query: 116 Y 116
Y
Sbjct: 225 Y 225
>gi|403300479|ref|XP_003940964.1| PREDICTED: high mobility group protein B1-like [Saimiri boliviensis
boliviensis]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKLKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGKMWNNTAANDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQVTN 130
E KA KLK +Y K + AY K N
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAKGKPN 169
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S+ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSCAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKVDKACYEREMKTY 78
>gi|301757910|ref|XP_002914802.1| PREDICTED: high mobility group protein B1-like [Ailuropoda
melanoleuca]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP K + S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|148707462|gb|EDL39409.1| mCG8212 [Mus musculus]
Length = 145
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKRPPS FF+F EF K NP ++ + V K G WK++S +E A Y +K
Sbjct: 35 KKDPNAPKRPPSGFFLFCSEFHPKIKFTNPGIS-IGDVAKKLGEMWKNLSDSE-AAYVTK 92
Query: 109 AEKLKSEYGKKMNAYNKK 126
A KLK + K ++ + K
Sbjct: 93 AAKLKEKDEKGVSDWQSK 110
>gi|354488105|ref|XP_003506211.1| PREDICTED: FACT complex subunit SSRP1-like isoform 1 [Cricetulus
griseus]
gi|354488107|ref|XP_003506212.1| PREDICTED: FACT complex subunit SSRP1-like isoform 2 [Cricetulus
griseus]
gi|344253527|gb|EGW09631.1| FACT complex subunit SSRP1 [Cricetulus griseus]
Length = 709
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+ E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS
Sbjct: 532 RKKSSEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSK 590
Query: 100 AEKAPYESKAEKLKSEYGKKMNAY 123
+K ++ KAE + EY K M Y
Sbjct: 591 EKKEEWDRKAEDARREYEKAMKEY 614
>gi|426232480|ref|XP_004010250.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 201
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ V V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-VGDVAKKLGQMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K +P KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGEPKKPRGKMSSYAFFVQTCREERKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|211520|gb|AAA48685.1| HMG box (bp. 1499..1757), partial [Gallus gallus]
Length = 669
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+ + E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK+MS
Sbjct: 493 RKKQVESKKGKDPNVPKRPMSAYMLWLNANREKIKSDHPGI-SITDLSKKAGELWKAMSK 551
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYN 124
+K ++ KAE K +Y K M Y+
Sbjct: 552 EKKEEWDRKAEDAKRDYEKAMKEYS 576
>gi|432113411|gb|ELK35821.1| FACT complex subunit SSRP1 [Myotis davidii]
Length = 709
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK+MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKAMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|255936601|ref|XP_002559327.1| Pc13g09020 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583947|emb|CAP91971.1| Pc13g09020 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 108
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 28 KAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVG 87
K +TAK S K KR ++ KKDPN PKR SA+ F + R ++ENP ++ VG
Sbjct: 3 KESTAK--STRKAPEKRVQRRKKDPNAPKRGLSAYMFFANDNRDKVREENPGIS-FGQVG 59
Query: 88 KAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
K G KWK++S ++ PY+ KA K Y ++ AY
Sbjct: 60 KQLGDKWKALSETDRKPYDDKAAADKKRYEEEKAAY 95
>gi|260803411|ref|XP_002596583.1| hypothetical protein BRAFLDRAFT_154496 [Branchiostoma floridae]
gi|229281842|gb|EEN52595.1| hypothetical protein BRAFLDRAFT_154496 [Branchiostoma floridae]
Length = 710
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PK+ +AF ++L R +KENP+ + + +GK AG KW+ M P++K +E K
Sbjct: 541 KKDPNAPKKAMTAFMLWLNATRSELRKENPDAS-IGEIGKIAGEKWREMGPSDKEEWEQK 599
Query: 109 AEKLKSEYGKKMNAY 123
A++ K Y M Y
Sbjct: 600 AKEDKERYKAAMEEY 614
>gi|444707034|gb|ELW48343.1| High mobility group protein B1 [Tupaia chinensis]
Length = 203
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 74 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 132
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 133 EKKAAKLKEKYEKDIAAYRAK 153
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
S++ F++ R+ KK++P+ + S K +WK+MS EK +E A+ K+ Y +
Sbjct: 2 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYER 61
Query: 119 KMNAY 123
+M Y
Sbjct: 62 EMKTY 66
>gi|149030113|gb|EDL85190.1| rCG63106 [Rattus norvegicus]
Length = 201
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 74 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 132
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 133 EKKAAKLKEKYEKDIAAYRAK 153
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
S++ F++ R+ KK++P+ + S K +WK+MS EK +E A+ K+ Y +
Sbjct: 2 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYER 61
Query: 119 KMNAY 123
+M Y
Sbjct: 62 EMKTY 66
>gi|124512426|ref|XP_001349346.1| high mobility group protein [Plasmodium falciparum 3D7]
gi|23499115|emb|CAD51195.1| high mobility group protein [Plasmodium falciparum 3D7]
Length = 99
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVT-AVSAVGKAAGGKWKSMSPAEKAPYESKA 109
DP PKR SA+ ++++ R KE P + V+ VGK G W +SPA+KAPYE KA
Sbjct: 20 DPLAPKRALSAYMFYVKDKRLEIIKEKPELAKDVAQVGKLIGEAWGQLSPAQKAPYEKKA 79
Query: 110 EKLKSEYGKKMNAYNKK 126
+ K Y K++ Y KK
Sbjct: 80 QLDKVRYSKEIEEYRKK 96
>gi|402591482|gb|EJW85411.1| FACT complex subunit SSRP1-A [Wuchereria bancrofti]
Length = 684
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
G R +K KKDPN PK+P SA+F++ E +FKKE +VT + + AG WK +
Sbjct: 536 GSRREKKKKDPNAPKKPQSAYFIWFGENYSSFKKEGVSVTEAA---QRAGKMWKEIDEET 592
Query: 102 KAPYESKAEKLKSEYGKKMNAY 123
K YE +A++ K Y ++M Y
Sbjct: 593 KKKYEERAKEDKERYAREMKEY 614
>gi|355691926|gb|EHH27111.1| hypothetical protein EGK_17228 [Macaca mulatta]
Length = 196
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
D N PKRPPS FF+F EF K NP ++ + + K G WK+++ +EK PY +KA
Sbjct: 76 DSNAPKRPPSGFFLFSSEFCPKMKSTNPGIS-IGDMVKKLGEMWKNLNDSEKQPYITKAA 134
Query: 111 KLKSEYGK 118
KLK +Y K
Sbjct: 135 KLKEKYEK 142
>gi|348556930|ref|XP_003464273.1| PREDICTED: FACT complex subunit SSRP1-like [Cavia porcellus]
Length = 709
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 20 NDRKVGKRKAA-TAKLDSGSK-RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKEN 77
+DR+ KRK AK+ K R+ E K KDPN PKRP SA+ ++L R+ K ++
Sbjct: 510 SDREEKKRKQLKRAKMTKDRKSRKKTVEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDH 569
Query: 78 PNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
P + +++ + K AG WK MS +K ++ KAE + EY K M Y
Sbjct: 570 PGI-SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|443895134|dbj|GAC72480.1| HMG box-containing protein [Pseudozyma antarctica T-34]
Length = 99
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR K+KKDP PKRP SA+ F ++ R+ K+ NP VG+ G KWK MS AEK
Sbjct: 16 KRTTKSKKDPAAPKRPLSAYMFFSQDHRERVKQANPEA-GFGDVGRLLGAKWKEMSEAEK 74
Query: 103 APYESKAEKLKSEYGKKMNAYNKKQ 127
PY A + K+ + AY+K++
Sbjct: 75 KPYNDMATRDKARAEAEKAAYSKRR 99
>gi|242781691|ref|XP_002479852.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|242781695|ref|XP_002479853.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|242781700|ref|XP_002479854.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218719999|gb|EED19418.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218720000|gb|EED19419.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218720001|gb|EED19420.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
Length = 103
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KKDPN PKR SA+ F E R+ + ENP + A A+G+ G WK +S AE+ PY
Sbjct: 16 EKRKKDPNAPKRGLSAYMFFANENRERVRDENPGI-AFGALGRKLGELWKGLSDAERKPY 74
Query: 106 ESKAEKLKSEYGKKMNAY 123
E KA K Y + +Y
Sbjct: 75 EDKAAADKKRYEDQKASY 92
>gi|148709727|gb|EDL41673.1| mCG9102 [Mus musculus]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|46394418|gb|AAS91553.1| AmphiHMG1/2 [Branchiostoma belcheri tsingtauense]
Length = 222
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G R K+ KKDPN PKR SAFF++ + R + +P+ V + K G +WK +S +
Sbjct: 84 EGGRRKRKKKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQ-VGDIAKILGKQWKEISDS 142
Query: 101 EKAPYESKAEKLKSEYGKKMNAYNK 125
+KA YE KA+ K+ Y K++ Y +
Sbjct: 143 DKAKYEKKAQTEKARYQKELAEYKR 167
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV-SAVGKAAGGKWKSMSPAEKAPYESK 108
KD NKPK SA+ F++E R+ +K+ PN V + + +WK+M+ EK +++
Sbjct: 3 KDKNKPKGKMSAYACFVQECRREHEKKYPNKQVVFTEFSQKCASRWKTMNDDEKKRFQAL 62
Query: 109 AEKLKSEYGKKMNAY 123
AE K Y + M Y
Sbjct: 63 AEADKRRYEQDMAKY 77
>gi|3342573|gb|AAC27651.1| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S + +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSERCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|397502952|ref|XP_003822100.1| PREDICTED: high mobility group protein B3-like [Pan paniscus]
gi|410056873|ref|XP_003317692.2| PREDICTED: high mobility group protein B3-like [Pan troglodytes]
Length = 221
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 28 KAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVG 87
K D K G E KKDPN KRP S FF+F EF K NP ++ + +
Sbjct: 85 KVDKVHYDQEMKDNGPVEGGKKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGIS-IGDMA 143
Query: 88 KAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
K G W + S EK PY +KA LK +Y K + Y K
Sbjct: 144 KKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSK 182
>gi|126327421|ref|XP_001367294.1| PREDICTED: high mobility group protein B1-like isoform 2
[Monodelphis domestica]
Length = 216
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 DMAKADKVRYEREMKTY 78
>gi|426245460|ref|XP_004023562.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1 [Ovis
aries]
Length = 703
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +V+ + K AG WK MS +K
Sbjct: 531 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SVTDLSKKAGEIWKGMSKEKKEE 589
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE+ + EY K M Y
Sbjct: 590 WDRKAEEARREYEKAMKEY 608
>gi|30584163|gb|AAP36330.1| Homo sapiens high-mobility group box 1 [synthetic construct]
gi|54697182|gb|AAV38963.1| high-mobility group box 1 [synthetic construct]
gi|54697184|gb|AAV38964.1| high-mobility group box 1 [synthetic construct]
gi|61367269|gb|AAX42974.1| high-mobility group box 1 [synthetic construct]
gi|61367275|gb|AAX42975.1| high-mobility group box 1 [synthetic construct]
gi|61371572|gb|AAX43692.1| high-mobility group box 1 [synthetic construct]
Length = 216
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|109098276|ref|XP_001102554.1| PREDICTED: high mobility group protein B1-like [Macaca mulatta]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
++ K+ Y ++M Y
Sbjct: 63 MSKADKARYEREMKTY 78
>gi|440912073|gb|ELR61675.1| Putative high mobility group protein B3-like protein, partial [Bos
grunniens mutus]
Length = 190
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D GS + GK KKDPN PKRPPS FF+F EF K NP ++ + V K G W
Sbjct: 76 DYGSAKGGK-----KKDPNAPKRPPSGFFLFFSEFCSKIKSTNPGIS-IGDVAKKLGEMW 129
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
++S ++K Y +K KLK +Y K + Y
Sbjct: 130 NNLSDSKKQLYINKDAKLK-KYEKDVADY 157
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYES 107
AK DP KPK SA F++ RK KK + K +WK+MS EK+ ++
Sbjct: 2 AKGDPEKPKGKMSAHAFFVQMCRKKHKKTPKVPVNFAEFSKKCSERWKTMSGKEKSTFDE 61
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 MAKADKVHYNQEMKDY 77
>gi|426244704|ref|XP_004016160.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 203
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGQMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|3342575|gb|AAC27652.1| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREGHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|148682766|gb|EDL14713.1| mCG116825 [Mus musculus]
Length = 162
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 37 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 95
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 96 EKKAAKLKEKYEKDIAAYRAK 116
>gi|190195542|gb|ACE73639.1| high-mobility group box 1 (predicted) [Sorex araneus]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|19114226|ref|NP_593314.1| High-mobility group non-histone chromatin protein (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74627097|sp|P87057.1|NHP6_SCHPO RecName: Full=Non-histone chromosomal protein 6
gi|2058376|emb|CAB08172.1| High-mobility group non-histone chromatin protein (predicted)
[Schizosaccharomyces pombe]
Length = 108
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKR SAF F E R+ K +NP+ T +G G +WK ++ E+ PYE K
Sbjct: 10 KKDPNTPKRNMSAFMFFSIENREKMKTDNPDAT-FGQLGSLLGKRWKELTSTEREPYEEK 68
Query: 109 AEKLKSEYGKKMNAYNKK 126
A + K Y ++ Y+ K
Sbjct: 69 ARQDKERYERERKEYDTK 86
>gi|992639|gb|AAB08831.1| high mobility group protein-2 (HMG-2) [Ambystoma mexicanum]
Length = 216
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP-YESKA 109
DPN PKR PSAFF+F E R K + P ++ + K G KW +P +K P +E KA
Sbjct: 92 DPNAPKRLPSAFFLFCSEHRLKIKADCPGLS-IGDTAKKLGEKWSEQTPKDKIPSFEQKA 150
Query: 110 EKLKSEYGKKMNAYNKK 126
KLK +Y K + AY K
Sbjct: 151 AKLKEKYEKDIAAYRAK 167
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+M+ EK +E
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMNAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M +Y
Sbjct: 63 MAKGDKVRYDREMKSY 78
>gi|380792505|gb|AFE68128.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 183
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAY 123
E KA KLK +Y K++ AY
Sbjct: 145 EKKAAKLKEKYEKEIAAY 162
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|5764680|gb|AAC27653.2| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAEEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|51592117|ref|NP_001004034.1| high mobility group protein B1 [Sus scrofa]
gi|123371|sp|P12682.3|HMGB1_PIG RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|164490|gb|AAA31050.1| non-histone protein HMG1 [Sus scrofa]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKHPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|74181373|dbj|BAE29962.1| unnamed protein product [Mus musculus]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ K+++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKRKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|444729709|gb|ELW70116.1| High mobility group protein B1 [Tupaia chinensis]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M +
Sbjct: 63 MAKADKAHYEREMKTF 78
>gi|431920962|gb|ELK18731.1| High mobility group protein B1 [Pteropus alecto]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|426236473|ref|XP_004012193.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 201
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGQMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|55639639|ref|XP_509611.1| PREDICTED: high mobility group protein B1 isoform 15 [Pan
troglodytes]
gi|114649261|ref|XP_001140156.1| PREDICTED: high mobility group protein B1 isoform 3 [Pan
troglodytes]
gi|114649265|ref|XP_001140328.1| PREDICTED: high mobility group protein B1 isoform 5 [Pan
troglodytes]
gi|114649269|ref|XP_001140491.1| PREDICTED: high mobility group protein B1 isoform 7 [Pan
troglodytes]
gi|332841128|ref|XP_003314147.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|332841133|ref|XP_003314149.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|397513185|ref|XP_003826902.1| PREDICTED: high mobility group protein B1 isoform 1 [Pan paniscus]
gi|397513187|ref|XP_003826903.1| PREDICTED: high mobility group protein B1 isoform 2 [Pan paniscus]
gi|397513189|ref|XP_003826904.1| PREDICTED: high mobility group protein B1 isoform 3 [Pan paniscus]
gi|397513191|ref|XP_003826905.1| PREDICTED: high mobility group protein B1 isoform 4 [Pan paniscus]
gi|397513193|ref|XP_003826906.1| PREDICTED: high mobility group protein B1 isoform 5 [Pan paniscus]
gi|397513195|ref|XP_003826907.1| PREDICTED: high mobility group protein B1 isoform 6 [Pan paniscus]
gi|397513197|ref|XP_003826908.1| PREDICTED: high mobility group protein B1 isoform 7 [Pan paniscus]
gi|410047671|ref|XP_003952424.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047673|ref|XP_003952425.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047675|ref|XP_003952426.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047677|ref|XP_003952427.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047679|ref|XP_003952428.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047682|ref|XP_003952429.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047686|ref|XP_003952430.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047688|ref|XP_003952431.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|48145843|emb|CAG33144.1| HMGB1 [Homo sapiens]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|620098|emb|CAA56631.1| high mobility group protein [Mus musculus]
gi|71681313|gb|AAI00313.1| High mobility group box 1 [Mus musculus]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|4504425|ref|NP_002119.1| high mobility group protein B1 [Homo sapiens]
gi|50950133|ref|NP_001002937.1| high mobility group protein B1 [Canis lupus familiaris]
gi|126352708|ref|NP_001075304.1| high mobility group protein B1 [Equus caballus]
gi|281182655|ref|NP_001162380.1| high mobility group protein B1 [Papio anubis]
gi|284005385|ref|NP_001164752.1| high mobility group protein B1 [Oryctolagus cuniculus]
gi|388453289|ref|NP_001252735.1| high mobility group protein B1 [Macaca mulatta]
gi|291397530|ref|XP_002715999.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
gi|291399645|ref|XP_002716268.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
gi|296203653|ref|XP_002748994.1| PREDICTED: high mobility group protein B1 isoform 2 [Callithrix
jacchus]
gi|297714815|ref|XP_002833818.1| PREDICTED: high mobility group protein B1-like [Pongo abelii]
gi|332242218|ref|XP_003270282.1| PREDICTED: high mobility group protein B1-like isoform 1 [Nomascus
leucogenys]
gi|332242222|ref|XP_003270284.1| PREDICTED: high mobility group protein B1-like isoform 3 [Nomascus
leucogenys]
gi|332242226|ref|XP_003270286.1| PREDICTED: high mobility group protein B1-like isoform 5 [Nomascus
leucogenys]
gi|332242228|ref|XP_003270287.1| PREDICTED: high mobility group protein B1-like isoform 6 [Nomascus
leucogenys]
gi|332242230|ref|XP_003270288.1| PREDICTED: high mobility group protein B1-like isoform 7 [Nomascus
leucogenys]
gi|332242232|ref|XP_003270289.1| PREDICTED: high mobility group protein B1-like isoform 8 [Nomascus
leucogenys]
gi|344284506|ref|XP_003414007.1| PREDICTED: high mobility group protein B1-like [Loxodonta africana]
gi|348583405|ref|XP_003477463.1| PREDICTED: high mobility group protein B1-like [Cavia porcellus]
gi|426375079|ref|XP_004054375.1| PREDICTED: high mobility group protein B1-like isoform 1 [Gorilla
gorilla gorilla]
gi|426375081|ref|XP_004054376.1| PREDICTED: high mobility group protein B1-like isoform 2 [Gorilla
gorilla gorilla]
gi|426375083|ref|XP_004054377.1| PREDICTED: high mobility group protein B1-like isoform 3 [Gorilla
gorilla gorilla]
gi|426375085|ref|XP_004054378.1| PREDICTED: high mobility group protein B1-like isoform 4 [Gorilla
gorilla gorilla]
gi|426375087|ref|XP_004054379.1| PREDICTED: high mobility group protein B1-like isoform 5 [Gorilla
gorilla gorilla]
gi|426375089|ref|XP_004054380.1| PREDICTED: high mobility group protein B1-like isoform 6 [Gorilla
gorilla gorilla]
gi|426375091|ref|XP_004054381.1| PREDICTED: high mobility group protein B1-like isoform 7 [Gorilla
gorilla gorilla]
gi|426375093|ref|XP_004054382.1| PREDICTED: high mobility group protein B1-like isoform 8 [Gorilla
gorilla gorilla]
gi|441624073|ref|XP_004088962.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624077|ref|XP_004088963.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624084|ref|XP_004088964.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624090|ref|XP_004088965.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624094|ref|XP_004088966.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|123369|sp|P09429.3|HMGB1_HUMAN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|61213476|sp|Q6YKA4.3|HMGB1_CANFA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|75076928|sp|Q4R844.3|HMGB1_MACFA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|119370722|sp|Q08IE6.3|HMGB1_HORSE RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028296|sp|B0CM99.1|HMGB1_CALJA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028297|sp|B1MTB0.1|HMGB1_CALMO RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028298|sp|A9RA84.1|HMGB1_PAPAN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|32327|emb|CAA31110.1| unnamed protein product [Homo sapiens]
gi|1435197|gb|AAB08987.1| non-histone chromatin protein HMG1 [Homo sapiens]
gi|13097234|gb|AAH03378.1| High-mobility group box 1 [Homo sapiens]
gi|21410205|gb|AAH30981.1| High-mobility group box 1 [Homo sapiens]
gi|30582719|gb|AAP35586.1| high-mobility group box 1 [Homo sapiens]
gi|37380997|gb|AAQ91389.1| high mobility group protein 1 [Homo sapiens]
gi|37548602|gb|AAN11296.1| high mobility group protein B1 [Canis lupus familiaris]
gi|37722533|gb|AAN11319.1| high mobility group B1 protein [Canis lupus familiaris]
gi|44890726|gb|AAH66889.1| High-mobility group box 1 [Homo sapiens]
gi|45709178|gb|AAH67732.1| High-mobility group box 1 [Homo sapiens]
gi|51476884|emb|CAH18408.1| hypothetical protein [Homo sapiens]
gi|54697178|gb|AAV38961.1| high-mobility group box 1 [Homo sapiens]
gi|60654989|gb|AAX32058.1| high mobility group box 1 [synthetic construct]
gi|61357252|gb|AAX41359.1| high-mobility group box 1 [synthetic construct]
gi|67968740|dbj|BAE00728.1| unnamed protein product [Macaca fascicularis]
gi|115354285|dbj|BAF33339.1| high-mobility group box 1 [Equus caballus]
gi|119628862|gb|EAX08457.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628864|gb|EAX08459.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628865|gb|EAX08460.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628866|gb|EAX08461.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628867|gb|EAX08462.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|121073803|gb|ABM47301.1| high mobility group box 1 protein [Homo sapiens]
gi|152112978|gb|ABS29271.1| high-mobility group box 1 [Homo sapiens]
gi|158256420|dbj|BAF84183.1| unnamed protein product [Homo sapiens]
gi|162415900|gb|ABX89266.1| high-mobility group box 1 (predicted) [Papio anubis]
gi|165934066|gb|ABY74560.1| high-mobility group box 1 (predicted) [Callithrix jacchus]
gi|169402702|gb|ACA53510.1| high-mobility group box 1 (predicted) [Callicebus moloch]
gi|183396417|gb|ACC62098.1| high-mobility group box 1 (predicted) [Rhinolophus ferrumequinum]
gi|193783763|dbj|BAG53745.1| unnamed protein product [Homo sapiens]
gi|196050399|gb|ACG64310.1| high-mobility group box 1 (predicted) [Otolemur garnettii]
gi|216397586|gb|ACJ72830.1| high-mobility group box 1 (predicted) [Oryctolagus cuniculus]
gi|261858262|dbj|BAI45653.1| high-mobility group box 1 [synthetic construct]
gi|335775462|gb|AEH58580.1| high mobility group protein B1-like protein [Equus caballus]
gi|351700460|gb|EHB03379.1| High mobility group protein B1 [Heterocephalus glaber]
gi|387542840|gb|AFJ72047.1| high mobility group protein B1 [Macaca mulatta]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|402854944|ref|XP_003892110.1| PREDICTED: high mobility group protein B1-like isoform 1 [Papio
anubis]
gi|402854946|ref|XP_003892111.1| PREDICTED: high mobility group protein B1-like isoform 2 [Papio
anubis]
Length = 214
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|397495503|ref|XP_003818592.1| PREDICTED: high mobility group protein B1-like [Pan paniscus]
Length = 209
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|384499401|gb|EIE89892.1| hypothetical protein RO3G_14603 [Rhizopus delemar RA 99-880]
Length = 352
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 9 AARVSQE--ALKPNDRKVGKRKAA------TAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
A R+ QE AL PN + + +A K + K+ +R KK K P PK P S
Sbjct: 147 ANRLKQEQRALHPNSMYIRRSRAELKEAGKMIKEEPSDKKTARRVKKKIKSPGIPKHPLS 206
Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKM 120
A+ +L E R K P+ + V + K KW +M+ E+AP+++KA+ K Y ++M
Sbjct: 207 AYMWYLTEVRPKTMKSFPS-SNVGQISKYCAEKWHTMTDEERAPWKTKAQVDKERYAREM 265
Query: 121 NAY 123
Y
Sbjct: 266 QLY 268
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 49 KKDPNKP---KRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K+D N P RPP+A+ +F ++ R+ K ++P + V + K +W+ MS EK Y
Sbjct: 85 KEDANAPIRVTRPPNAYLLFNKKMRRVLKDQDPTMN-VGEISKQIAERWRKMSKEEKEMY 143
Query: 106 ESKAEKLKSE 115
++A +LK E
Sbjct: 144 VNEANRLKQE 153
>gi|348551709|ref|XP_003461672.1| PREDICTED: high mobility group protein B1-like [Cavia porcellus]
Length = 214
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|149635755|ref|XP_001508702.1| PREDICTED: high mobility group protein B1-like [Ornithorhynchus
anatinus]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ S K +WK+MS EK +E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDAAVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 DMAKADKVRYEREMKTY 78
>gi|109510563|ref|XP_001059688.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392343404|ref|XP_003754879.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 213
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|41386729|ref|NP_788785.1| high mobility group protein B1 [Bos taurus]
gi|410947173|ref|XP_003980327.1| PREDICTED: high mobility group protein B1 [Felis catus]
gi|123367|sp|P10103.3|HMGB1_BOVIN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|417|emb|CAA31284.1| unnamed protein product [Bos taurus]
gi|73586656|gb|AAI02930.1| HMGB1 protein [Bos taurus]
gi|146231904|gb|ABQ13027.1| high-mobility group box 1 [Bos taurus]
gi|296481787|tpg|DAA23902.1| TPA: high mobility group protein B1 [Bos taurus]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|6754208|ref|NP_034569.1| high mobility group protein B1 [Mus musculus]
gi|6981026|ref|NP_037095.1| high mobility group protein B1 [Rattus norvegicus]
gi|407262920|ref|XP_003945388.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
gi|52783618|sp|P63159.2|HMGB1_RAT RecName: Full=High mobility group protein B1; AltName:
Full=Amphoterin; AltName: Full=Heparin-binding protein
p30; AltName: Full=High mobility group protein 1;
Short=HMG-1
gi|52783747|sp|P63158.2|HMGB1_MOUSE RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|9082303|gb|AAF82799.1|AF275734_1 amphoterin [Rattus norvegicus]
gi|53382|emb|CAA78042.1| non-histone chromosomal high-mobility group 1 protein [Mus
musculus]
gi|56365|emb|CAA68526.1| unnamed protein product [Rattus norvegicus]
gi|202885|gb|AAA40729.1| Amphoterin [Rattus norvegicus]
gi|208488|gb|AAA73006.1| high mobility group 1 protein [synthetic construct]
gi|437102|gb|AAA20508.1| HMG-1 [Mus musculus]
gi|13879238|gb|AAH06586.1| High mobility group box 1 [Mus musculus]
gi|14250281|gb|AAH08565.1| High mobility group box 1 [Mus musculus]
gi|26332344|dbj|BAC29902.1| unnamed protein product [Mus musculus]
gi|26351305|dbj|BAC39289.1| unnamed protein product [Mus musculus]
gi|38512146|gb|AAH61779.1| High mobility group box 1 [Rattus norvegicus]
gi|51859468|gb|AAH81839.1| High mobility group box 1 [Rattus norvegicus]
gi|52789475|gb|AAH83067.1| High mobility group box 1 [Mus musculus]
gi|54648288|gb|AAH85090.1| High mobility group box 1 [Mus musculus]
gi|56788766|gb|AAH88402.1| High mobility group box 1 [Rattus norvegicus]
gi|61403558|gb|AAH91741.1| High mobility group box 1 [Mus musculus]
gi|62739258|gb|AAH94030.1| High mobility group box 1 [Mus musculus]
gi|74186113|dbj|BAE34226.1| unnamed protein product [Mus musculus]
gi|84040262|gb|AAI10668.1| Hmgb1 protein [Mus musculus]
gi|84105496|gb|AAI11469.1| High mobility group box 1 [Mus musculus]
gi|149034811|gb|EDL89531.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|149034812|gb|EDL89532.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|149034813|gb|EDL89533.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|195539712|gb|AAI68143.1| High mobility group box 1 [Rattus norvegicus]
Length = 215
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|417397281|gb|JAA45674.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 216
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 87 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 145
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 146 EKKAAKLKEKYEKDIAAYRAK 166
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKM 120
A+ K+ Y ++M
Sbjct: 63 MAKADKARYEREM 75
>gi|149691739|ref|XP_001488130.1| PREDICTED: high mobility group protein B1-like [Equus caballus]
Length = 212
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K +P KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGEPKKPRGRMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|410057418|ref|XP_003954213.1| PREDICTED: high mobility group protein B1-like [Pan troglodytes]
Length = 210
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ V V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-VGDVAKKLGEMWNNAAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|123368|sp|P07156.1|HMGB1_CRIGR RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|49483|emb|CAA68441.1| high mobility group protein [Cricetulus griseus]
Length = 180
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 51 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 109
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 110 EKKAAKLKEKYEKDIAAYRAK 130
>gi|196010223|ref|XP_002114976.1| hypothetical protein TRIADDRAFT_64155 [Trichoplax adhaerens]
gi|190582359|gb|EDV22432.1| hypothetical protein TRIADDRAFT_64155 [Trichoplax adhaerens]
Length = 694
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K +DPN PKRP S + ++L++ R K ENP+ T V+ V K AG WKS+ EK +
Sbjct: 547 KNARDPNLPKRPLSGYMLWLQKQRDRIKNENPSFT-VAEVAKKAGEIWKSLKEEEKKKWN 605
Query: 107 SKAEKLKSEYGKKMNAYNKKQVT 129
+++ KLK +Y K M YN++ T
Sbjct: 606 NESAKLKEQYNKDMAEYNEQNQT 628
>gi|26350077|dbj|BAC38678.1| unnamed protein product [Mus musculus]
Length = 181
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|15236607|ref|NP_194111.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|75266376|sp|Q9SUP7.1|HMGB6_ARATH RecName: Full=High mobility group B protein 6; AltName:
Full=Nucleosome/chromatin assembly factor group D 06;
Short=Nucleosome/chromatin assembly factor group D 6;
AltName: Full=WRKY transcription factor 53;
Short=AtWRKY53; Short=WRKY DNA-binding protein 53
gi|4454049|emb|CAA23046.1| 98b like protein [Arabidopsis thaliana]
gi|7269229|emb|CAB81298.1| 98b like protein [Arabidopsis thaliana]
gi|18377799|gb|AAL67049.1| putative 98b protein [Arabidopsis thaliana]
gi|20465867|gb|AAM20038.1| putative 98b protein [Arabidopsis thaliana]
gi|22022506|gb|AAM83212.1| putative 98b protein [Arabidopsis thaliana]
gi|332659407|gb|AEE84807.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 456
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPK+P S++F+F ++ RK +E P T + V KWK +S EK Y KA
Sbjct: 375 DPNKPKKPASSYFLFSKDERKKLTEERPG-TNNATVTALISLKWKELSEEEKQVYNGKAA 433
Query: 111 KLKSEYGKKMNAYNKK 126
KL Y K++ AYNKK
Sbjct: 434 KLMEAYKKEVEAYNKK 449
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPK P SAF V+ E R ++EN +V V K G +WK++S +KAPYE A+
Sbjct: 251 DPLKPKHPVSAFLVYANERRAALREENKSVV---EVAKITGEEWKNLSDKKKAPYEKVAK 307
Query: 111 KLKSEYGKKMNAY 123
K K Y + M Y
Sbjct: 308 KNKETYLQAMEEY 320
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 14 QEALKPNDRKVGKRKA----ATAKLDSGSKRQGKREK---KAKKDPNKPKRPPSAFFVFL 66
QE LK +K+ K K T S Q ++EK K KKD + KRP S++ ++
Sbjct: 90 QEKLKVELKKLQKMKEFKPNMTFACGQSSLTQAEQEKANKKKKKDCPETKRPSSSYVLWC 149
Query: 67 EEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
++ KKENP G KWKS+S +K PYE + + K Y
Sbjct: 150 KDQWTEVKKENPEAD-FKETSNILGAKWKSLSAEDKKPYEERYQVEKEAY 198
>gi|5764678|gb|AAC27650.2| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+ S EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTKSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|83014391|ref|XP_918585.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
Length = 213
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|380793129|gb|AFE68440.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 195
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|380793127|gb|AFE68439.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 195
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|334186863|ref|NP_001190816.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|332659408|gb|AEE84808.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 450
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPK+P S++F+F ++ RK +E P T + V KWK +S EK Y KA
Sbjct: 369 DPNKPKKPASSYFLFSKDERKKLTEERPG-TNNATVTALISLKWKELSEEEKQVYNGKAA 427
Query: 111 KLKSEYGKKMNAYNKK 126
KL Y K++ AYNKK
Sbjct: 428 KLMEAYKKEVEAYNKK 443
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPK P SAF V+ E R ++EN +V V K G +WK++S +KAPYE A+
Sbjct: 251 DPLKPKHPVSAFLVYANERRAALREENKSVV---EVAKITGEEWKNLSDKKKAPYEKVAK 307
Query: 111 KLKSEYGKKMNAY 123
K K Y + M Y
Sbjct: 308 KNKETYLQAMEEY 320
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
Q K KK KKD + KRP S++ ++ ++ KKENP G KWKS+S
Sbjct: 124 QEKANKKKKKDCPETKRPSSSYVLWCKDQWTEVKKENPEAD-FKETSNILGAKWKSLSAE 182
Query: 101 EKAPYESKAEKLKSEY 116
+K PYE + + K Y
Sbjct: 183 DKKPYEERYQVEKEAY 198
>gi|119628863|gb|EAX08458.1| high-mobility group box 1, isoform CRA_b [Homo sapiens]
Length = 206
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|26341410|dbj|BAC34367.1| unnamed protein product [Mus musculus]
Length = 178
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|15237042|ref|NP_192846.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|75266789|sp|Q9T012.1|HMG13_ARATH RecName: Full=High mobility group B protein 13; AltName:
Full=Nucleosome/chromatin assembly factor group D 13
gi|4850287|emb|CAB43043.1| 98b like protein [Arabidopsis thaliana]
gi|7267807|emb|CAB81209.1| 98b like protein [Arabidopsis thaliana]
gi|22136604|gb|AAM91621.1| putative 98b protein [Arabidopsis thaliana]
gi|332657570|gb|AEE82970.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 446
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 14 QEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKK-DPNKPKRPPSAFFVFLEEFRKT 72
QEAL+ + K+K T + +K K +KK + DPNKPK+P S++F+F ++ RK+
Sbjct: 335 QEALQ-----LLKKKEKTDNIIKKTKETAKNKKKNENVDPNKPKKPTSSYFLFCKDARKS 389
Query: 73 FKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+E+P + S V KW + EK Y SKA +L Y K++ YNK
Sbjct: 390 VLEEHPGINN-STVTAHISLKWMELGEEEKQVYNSKAAELMEAYKKEVEEYNK 441
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPK+P SA+ ++ E R K EN +V V K AG +WK++S +KAPY+ A+
Sbjct: 242 DPLKPKQPISAYLIYANERRAALKGENKSVIEV---AKMAGEEWKNLSEEKKAPYDQMAK 298
Query: 111 KLKSEYGKKMNAY 123
K K Y ++M Y
Sbjct: 299 KNKEIYLQEMEGY 311
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
D + KRP + + ++ ++ KK+NP G KWK +S EK PYE K +
Sbjct: 125 DCAETKRPSTPYILWCKDNWNEVKKQNPEAD-FKETSNILGAKWKGISAEEKKPYEEKYQ 183
Query: 111 KLKSEY 116
K Y
Sbjct: 184 ADKEAY 189
>gi|296479522|tpg|DAA21637.1| TPA: structure specific recognition protein 1 [Bos taurus]
Length = 709
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +V+ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SVTDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|159162414|pdb|1HME|A Chain A, Structure Of The Hmg Box Motif In The B-Domain Of Hmg1
gi|159162415|pdb|1HMF|A Chain A, Structure Of The Hmg Box Motif In The B-Domain Of Hmg1
Length = 77
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PYE KA
Sbjct: 2 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPYEKKA 60
Query: 110 EKLKSEYGKKMNAYNKK 126
KLK +Y K + AY K
Sbjct: 61 AKLKEKYEKDIAAYRAK 77
>gi|167744990|pdb|2YRQ|A Chain A, Solution Structure Of The Tandem Hmg Box Domain From Human
High Mobility Group Protein B1
Length = 173
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 93 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 151
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 152 EKKAAKLKEKYEKDIAAYRAK 172
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKA 109
DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E A
Sbjct: 12 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 71
Query: 110 EKLKSEYGKKMNAY 123
+ K+ Y ++M Y
Sbjct: 72 KADKARYEREMKTY 85
>gi|119623033|gb|EAX02628.1| hCG1644442 [Homo sapiens]
Length = 201
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 28 KAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVG 87
K D K G E KKDPN KRP S FF+F EF K NP ++ + +
Sbjct: 65 KVDKVHYDQEMKDNGPVEGGKKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGIS-IGDMA 123
Query: 88 KAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
K G W + S EK PY +KA LK +Y K + Y K
Sbjct: 124 KKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSK 162
>gi|260806967|ref|XP_002598355.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
gi|229283627|gb|EEN54367.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
Length = 223
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G R K+ KKDPN PKR SAFF++ + R + +P+ V + K G +WK +S +
Sbjct: 85 EGGRRKRKKKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQ-VGEIAKILGRQWKEISDS 143
Query: 101 EKAPYESKAEKLKSEYGKKMNAYNK 125
+KA YE KA+ K+ Y K++ Y +
Sbjct: 144 DKAKYEKKAQTEKARYQKELAEYKR 168
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV-SAVGKAAGGKWKSMSPAEKAPYESK 108
KD NKPK SA+ F++E RK +K+ P+ V + K +WK+M+ EK ++
Sbjct: 4 KDKNKPKGKMSAYACFVQECRKEHEKKYPDKQVVFTEFSKKCAERWKTMNDGEKKRFQDL 63
Query: 109 AEKLKSEYGKKMNAY 123
AE K Y ++M Y
Sbjct: 64 AETDKRRYEREMAKY 78
>gi|66840992|emb|CAI64395.1| putative high mobility group protein [Triticum aestivum]
Length = 112
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 37/55 (67%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KPKR P+ FF FL EFR + +++P V+AV KAAG KW+SMS EKA Y K
Sbjct: 22 KPKRAPTPFFAFLAEFRPQYMEKHPEAKGVAAVTKAAGEKWRSMSDEEKAKYGGK 76
>gi|402865885|ref|XP_003897133.1| PREDICTED: high mobility group protein B1-like [Papio anubis]
Length = 221
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 92 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 150
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 151 EKKAAKLKEKYEKDIAAYRAK 171
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M +
Sbjct: 63 MAKADKARYEREMKTW 78
>gi|353241760|emb|CCA73553.1| hypothetical protein PIIN_07506 [Piriformospora indica DSM 11827]
Length = 312
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PKRPPSA+ ++ RK K +NP +T +G+ + W +S EK PY
Sbjct: 113 KDPNAPKRPPSAYLLYQNAIRKEIKDKNPTMTYAEVLGEIS-KMWSGLSAEEKKPYLDAT 171
Query: 110 EKLKSEYGKKMNAYNKKQV 128
E K EY K AY
Sbjct: 172 EIAKGEYEKSKAAYEADHT 190
>gi|296479353|tpg|DAA21468.1| TPA: high-mobility group box 1-like [Bos taurus]
Length = 215
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAVDDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ K++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHTKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKVDKARYEREMKTY 78
>gi|332863449|ref|XP_001169802.2| PREDICTED: high mobility group protein B1-like, partial [Pan
troglodytes]
Length = 174
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|155371817|ref|NP_001094511.1| FACT complex subunit SSRP1 [Bos taurus]
gi|151554654|gb|AAI49986.1| SSRP1 protein [Bos taurus]
gi|440894802|gb|ELR47155.1| FACT complex subunit SSRP1 [Bos grunniens mutus]
Length = 709
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +V+ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SVTDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|600761|gb|AAA57042.1| high mobility group 1 protein [Mus musculus]
Length = 215
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|183212219|gb|ACC54772.1| high mobility group box 3 [Xenopus borealis]
Length = 152
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
DPN PKRPPS FF+F EFR K NP +T + V K G W ++ +EK PY
Sbjct: 97 DPNAPKRPPSGFFLFCSEFRPNIKSTNPGIT-IGDVAKKLGEMWNNLGDSEKQPY 150
>gi|444722479|gb|ELW63171.1| High mobility group protein B2 [Tupaia chinensis]
Length = 147
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN PKRPPSAFF+F E K E+P ++ + K G W S +K P E KA K
Sbjct: 30 PNTPKRPPSAFFLFCSEHLPKIKSEHPGLS-IGDTAKKLGEMWSEQSAKDKQPCEQKAAK 88
Query: 112 LKSEYGKKMNAYNKK 126
LK +Y K + AY K
Sbjct: 89 LKEKYEKDIAAYRAK 103
>gi|444705434|gb|ELW46861.1| FACT complex subunit SSRP1 [Tupaia chinensis]
Length = 704
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 532 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 590
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 591 WDRKAEDARREYEKAMKEY 609
>gi|67524855|ref|XP_660489.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|74597086|sp|Q5B995.1|NHP6_EMENI RecName: Full=Non-histone chromosomal protein 6
gi|40744280|gb|EAA63456.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|259486178|tpe|CBF83812.1| TPA: Non-histone chromosomal protein 6
[Source:UniProtKB/Swiss-Prot;Acc:Q5B995] [Aspergillus
nidulans FGSC A4]
Length = 106
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKR SA+ F + R ++ENP ++ VGK G KWKS+S E+ PYE K
Sbjct: 21 KKDPNAPKRGLSAYMFFANDNRDKVREENPGIS-FGQVGKMLGEKWKSLSDKERKPYEDK 79
Query: 109 AEKLKSEYGKKMNAY 123
A K Y + AY
Sbjct: 80 AAADKKRYEDEKAAY 94
>gi|281343903|gb|EFB19487.1| hypothetical protein PANDA_011742 [Ailuropoda melanoleuca]
Length = 607
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 520 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 578
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 579 WDRKAEDARREYEKAMKEY 597
>gi|148680486|gb|EDL12433.1| mCG1219 [Mus musculus]
Length = 215
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ ++ F++ R+ KK++P+ + S K +WK+M EK +E
Sbjct: 3 KGDPKKPRGKMYSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMYAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 IAKADKARYEREMKTY 78
>gi|391638|dbj|BAA03261.1| ORF1 [Gallus gallus]
Length = 298
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+ + E K KDPN PKRP SA+ ++L R+ K ++P ++ ++ + K AG WK+MS
Sbjct: 119 RKKQVESKKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGIS-ITDLSKKAGELWKAMSK 177
Query: 100 AEKAPYESKAEKLKSEYGKKMNAY 123
+K ++ KAE K +Y K M Y
Sbjct: 178 EKKEEWDRKAEDAKRDYEKAMKEY 201
>gi|157820087|ref|NP_001102843.1| high mobility group box 1 like [Rattus norvegicus]
gi|149043247|gb|EDL96779.1| rCG50935 [Rattus norvegicus]
Length = 214
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIPAYRAK 165
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|449272347|gb|EMC82325.1| FACT complex subunit SSRP1 [Columba livia]
Length = 704
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+ + E K KDPN PKRP SA+ ++L R+ K ++P ++ ++ + K AG WK+MS
Sbjct: 530 RKKQPESKKGKDPNAPKRPMSAYMLWLNASRERIKSDHPGIS-ITDLSKKAGELWKAMSK 588
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYN 124
+K ++ KAE + +Y K M Y+
Sbjct: 589 EKKEEWDRKAEDARRDYEKAMKEYS 613
>gi|296218242|ref|XP_002755324.1| PREDICTED: FACT complex subunit SSRP1 [Callithrix jacchus]
Length = 709
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|432915279|ref|XP_004079157.1| PREDICTED: TOX high mobility group box family member 4-A-like
[Oryzias latipes]
Length = 611
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Query: 22 RKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVT 81
R GK A ++ + ++G++ KKDPN+P++P SA+ +F + + K +NPN +
Sbjct: 222 RSGGKPAAVAPAPETTTAKKGRK----KKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAS 277
Query: 82 AVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQVT 129
V K W S++ +K Y+ K E K EY K + AY Q++
Sbjct: 278 -FGEVSKIVASMWDSLAEDQKQVYKRKTEAAKKEYLKALAAYKANQLS 324
>gi|410983521|ref|XP_003998087.1| PREDICTED: TOX high mobility group box family member 3 [Felis
catus]
Length = 561
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E ++R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 204 KSATPSPSSSINEEDADESNRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 259
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 260 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 318
Query: 122 AYNKKQV 128
AY V
Sbjct: 319 AYRASLV 325
>gi|300122042|emb|CBK22616.2| unnamed protein product [Blastocystis hominis]
Length = 224
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+KPK+P S + + E R+ KKENP + ++ + K G KWK +S EK PY+ E
Sbjct: 22 DPDKPKKPLSGYMRYCNEQREQVKKENPEL-KLTEISKVLGEKWKELSEEEKKPYQDAYE 80
Query: 111 KLKSEYGKKMNAYNKKQVT 129
K +Y +M Y K T
Sbjct: 81 ADKEKYDLQMEEYKKTHPT 99
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
DPNKPKRP S++ +F + R+ K++NP+++ + G WK +
Sbjct: 105 DPNKPKRPLSSYIIFSNDKREEVKRKNPDMSN-KEITTLLGKMWKEL 150
>gi|405963576|gb|EKC29138.1| FACT complex subunit SSRP1 [Crassostrea gigas]
Length = 757
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRP SA+F++ R+ KK+ P++ +++ + K AG WK M +K + KA
Sbjct: 556 DPNAPKRPQSAYFLWFNANREELKKDTPDI-SITDLSKKAGEVWKQMEDTDKTEWNEKAA 614
Query: 111 KLKSEYGKKMNAYNKK 126
+ K EY K M Y K
Sbjct: 615 EAKKEYEKAMEEYKAK 630
>gi|394337181|gb|AFN27605.1| high mobility group protein 1 [Azumapecten farreri]
Length = 215
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPKRP +A+F+FL +FRK K N N+ + K AG +W+ ++ +K PYE +++
Sbjct: 96 DPTKPKRPQTAYFLFLGDFRKKMK--NSNIGHKDII-KQAGAEWRQLTDQDKKPYEDQSQ 152
Query: 111 KLKSEYGKKMNAY 123
L+ +Y +++ +
Sbjct: 153 ILQKKYDEELKKW 165
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
DS +KR K+ KD N+PKR SA+F FL R K NV+ ++ K A +W
Sbjct: 7 DSPTKR-----KRKPKDANRPKRATSAYFFFLAHCRAEAKTTGRNVSKIADFTKEASAQW 61
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQVTNLVP 133
+SM+ ++K ++ +A K K+ Y +M + K + P
Sbjct: 62 RSMTSSDKKQFDDRAAKDKARYDAEMAVFKGKVIDPTKP 100
>gi|344299407|ref|XP_003421377.1| PREDICTED: FACT complex subunit SSRP1 [Loxodonta africana]
Length = 709
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|335281869|ref|XP_003353912.1| PREDICTED: FACT complex subunit SSRP1 [Sus scrofa]
Length = 709
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|426236471|ref|XP_004012192.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 213
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGNVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|351704050|gb|EHB06969.1| High mobility group protein B2 [Heterocephalus glaber]
Length = 156
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F ++R K E+P ++ K +G W S +K PYE K KL
Sbjct: 43 NAPKRPPSAFFLFCSKYRPKIKSEHPGLS-TGDTAKKSGEMWSEQSAKDKQPYEQKGAKL 101
Query: 113 KSEYGKKMNAYNKK 126
+Y K + AY+ K
Sbjct: 102 MEKYEKDIAAYHAK 115
>gi|403254821|ref|XP_003920153.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1 [Saimiri
boliviensis boliviensis]
Length = 826
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P ++ ++ + K AG WK MS +K
Sbjct: 654 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGIS-ITDLSKKAGEIWKGMSKEKKEE 712
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 713 WDRKAEDARREYEKAMKEY 731
>gi|444726553|gb|ELW67082.1| High mobility group protein B1 [Tupaia chinensis]
Length = 111
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN +R PSAFF+F E+R K E+P ++ + V K G W + + +K PY KA
Sbjct: 39 KDPNASQRSPSAFFLFSSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAAGDKQPYGKKA 97
Query: 110 EKLKSEYGKKMNAY 123
KLK +Y K + AY
Sbjct: 98 AKLKEKYEKDIAAY 111
>gi|410973949|ref|XP_003993410.1| PREDICTED: FACT complex subunit SSRP1 [Felis catus]
Length = 709
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|383872505|ref|NP_001244820.1| FACT complex subunit SSRP1 [Macaca mulatta]
gi|402893460|ref|XP_003909913.1| PREDICTED: FACT complex subunit SSRP1 [Papio anubis]
gi|355566511|gb|EHH22890.1| Facilitates chromatin transcription complex subunit SSRP1 [Macaca
mulatta]
gi|355752113|gb|EHH56233.1| Facilitates chromatin transcription complex subunit SSRP1 [Macaca
fascicularis]
gi|380784229|gb|AFE63990.1| FACT complex subunit SSRP1 [Macaca mulatta]
gi|383421069|gb|AFH33748.1| FACT complex subunit SSRP1 [Macaca mulatta]
gi|384949008|gb|AFI38109.1| FACT complex subunit SSRP1 [Macaca mulatta]
Length = 709
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|410928771|ref|XP_003977773.1| PREDICTED: TOX high mobility group box family member 4-B-like
[Takifugu rubripes]
Length = 684
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
G ++ + KKDPN+P++P SA+ +F + + K +NP+ + V K W S++ +
Sbjct: 285 GNKKGRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAS-FGEVSKIVASMWDSLAEEQ 343
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQVT 129
K Y+ K E K EY K + AY Q++
Sbjct: 344 KQVYKRKTEAAKKEYLKALAAYKANQLS 371
>gi|226530710|ref|NP_001144208.1| hypothetical protein [Zea mays]
gi|195638446|gb|ACG38691.1| hypothetical protein [Zea mays]
gi|413936487|gb|AFW71038.1| hypothetical protein ZEAMMB73_874920 [Zea mays]
Length = 487
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
+P SA+FV+ +E R T E NV +GK G +WK+M+ ++APYE A K K EY
Sbjct: 289 QPMSAYFVYSQERRATLVAEKKNV---PEIGKITGEEWKNMTEGQRAPYEEVARKQKEEY 345
Query: 117 GKKMNAYNKK 126
K+M Y +K
Sbjct: 346 HKQMEVYKQK 355
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PKRP S+F +F +E RK +E P + S + KWK +S E+ + +KA
Sbjct: 408 DPNRPKRPASSFLLFSKEERKQLIEERPGINN-STLNALITVKWKELSGEERQAWNAKAA 466
Query: 111 KLKSEYGKKMNAYNKKQVTN 130
+ Y K+M Y K Q ++
Sbjct: 467 PAMAAYKKEMEEYTKAQSSS 486
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 56 KRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSE 115
K+P A+ ++L++ KKENP V G KWK++ EK PYE + + K
Sbjct: 166 KKPCPAYVLWLKDQWTEVKKENPEAD-FKEVSNTLGAKWKALGAEEKQPYEDRYRQEKEA 224
Query: 116 Y 116
Y
Sbjct: 225 Y 225
>gi|417404085|gb|JAA48818.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 709
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|452839855|gb|EME41794.1| hypothetical protein DOTSEDRAFT_74007 [Dothistroma septosporum
NZE10]
Length = 108
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKR SA+ F E R + +NP + VGK G KWK +S +KAPYE
Sbjct: 22 KKKKDPNMPKRGLSAYMFFANEQRDKVRDDNPGIK-FGEVGKQLGEKWKGLSEKQKAPYE 80
Query: 107 SKAEKLKSEYGKKMNAYN 124
+KA K Y ++ AY
Sbjct: 81 AKAAADKKRYEEEKAAYT 98
>gi|401624308|gb|EJS42370.1| abf2p [Saccharomyces arboricola H-6]
Length = 183
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 34 LDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGK 93
L SKR R + K+ P KRP SA+F+FL++ R F KENP + + + K AG K
Sbjct: 25 LLKASKRTQLRNELIKQGP---KRPTSAYFLFLQDHRSQFVKENPTLRP-AEISKVAGEK 80
Query: 94 WKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
W+++ K Y S+ +KL SEY K Y++K
Sbjct: 81 WQTLDAGIKDKYLSQRKKLFSEYQKAKKEYDEK 113
>gi|301774634|ref|XP_002922750.1| PREDICTED: FACT complex subunit SSRP1-like [Ailuropoda melanoleuca]
Length = 709
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|194208591|ref|XP_001492381.2| PREDICTED: TOX high mobility group box family member 3 [Equus
caballus]
Length = 559
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E ++R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 190 KSATPSPSSSINEEDADESNRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 245
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 246 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 304
Query: 122 AYNKKQV 128
AY V
Sbjct: 305 AYRASLV 311
>gi|429855216|gb|ELA30184.1| hmg box protein [Colletotrichum gloeosporioides Nara gc5]
Length = 468
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 41 QGKRE--KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
Q KR+ + K D N P+RPPSA+ +F + R K N T ++ K G W++++
Sbjct: 100 QAKRKYRRHPKPDENAPERPPSAYVLFSNKMRDELKGRNLTFTEIA---KLVGEHWQNLT 156
Query: 99 PAEKAPYESKAEKLKSEYGKKMNAYNK 125
PAEK PYE+ A K K +Y + Y K
Sbjct: 157 PAEKEPYETSALKAKEKYNHDLAEYKK 183
>gi|344228278|gb|EGV60164.1| hypothetical protein CANTEDRAFT_110112 [Candida tenuis ATCC 10573]
Length = 89
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDP+ PKR SA+ F + R + ENP + A VG+ G +WK+++ EK PYE K
Sbjct: 11 KKDPDAPKRSLSAYMFFANDNRDIVRAENPGI-AFGQVGRLLGERWKALTADEKIPYEKK 69
Query: 109 AEKLKSEYGKKMNAYNKK 126
A K Y K+ Y KK
Sbjct: 70 ANDDKKRYEKQKAEYAKK 87
>gi|296470699|tpg|DAA12814.1| TPA: high mobility group box 3-like [Bos taurus]
Length = 197
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
D GS + GK KDPN PKRPPS FF+F EF K NP ++ + V K G W
Sbjct: 76 DYGSAKGGK------KDPNAPKRPPSGFFLFFSEFCSEIKSTNPGIS-IGDVAKKLGEMW 128
Query: 95 KSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
++S ++K Y +K KLK +Y K + Y
Sbjct: 129 NNLSDSKKQLYVNKDAKLK-KYEKDVADY 156
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYES 107
AK DP KPK SA F++ RK KK + K +WK+MS EK+ ++
Sbjct: 2 AKGDPEKPKGKMSAHAFFVQMCRKKHKKTPKVPVNFAEFSKKCSERWKTMSGKEKSTFDE 61
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 MAKADKVHYNQEMKDY 77
>gi|255552860|ref|XP_002517473.1| structure-specific recognition protein, putative [Ricinus communis]
gi|223543484|gb|EEF45015.1| structure-specific recognition protein, putative [Ricinus communis]
Length = 640
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PK+ S F F + R+ KK NP + A VGK G KWK +S EK PYE+KA
Sbjct: 552 DPNAPKKAMSGFMFFSQMERENVKKSNPGI-AFGDVGKILGDKWKKLSAEEKEPYEAKAR 610
Query: 111 KLKSEYGKKMNAYNKKQVTNL 131
K Y ++++ Y Q ++
Sbjct: 611 ADKKRYKEEVSGYKNPQPMDI 631
>gi|345783817|ref|XP_859953.2| PREDICTED: FACT complex subunit SSRP1 isoform 4 [Canis lupus
familiaris]
Length = 711
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 539 EVKKGKDPNAPKRPMSAYMLWLNASREKIKADHPGI-SITDLSKKAGEIWKGMSKEKKEE 597
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 598 WDRKAEDARREYEKAMKEY 616
>gi|449501868|ref|XP_004174468.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1
[Taeniopygia guttata]
Length = 705
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+ + E K KDPN PKRP SA+ ++L R+ K ++P ++ ++ + K AG WK+MS
Sbjct: 530 RKKQPESKKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGIS-ITDLSKKAGELWKAMSK 588
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYN 124
+K ++ KAE + +Y K M Y+
Sbjct: 589 EKKEEWDRKAEDARRDYEKAMKEYS 613
>gi|344241535|gb|EGV97638.1| High mobility group protein B1 [Cricetulus griseus]
gi|344241536|gb|EGV97639.1| High mobility group protein B1 [Cricetulus griseus]
Length = 154
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PKRPP AFF+F E+ ++ NP ++ + V K G W + + +K YE KA
Sbjct: 38 KDPNAPKRPPLAFFLFCCEYHPKNQRRNPGLS-IGDVAKKLGEMWNNTAADDKQTYEKKA 96
Query: 110 EKLKSEYGKKMNAYNKK 126
+LK +Y K AY K
Sbjct: 97 AELKEKYKKDTAAYRTK 113
>gi|1806648|gb|AAB41544.1| structure-specific recognition protein 1 [Bos taurus]
Length = 460
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +V+ + K AG WK MS +K
Sbjct: 288 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SVTDLSKKAGEIWKGMSKEKKEE 346
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 347 WDRKAEDARREYEKAMKEY 365
>gi|348680492|gb|EGZ20308.1| hypothetical protein PHYSODRAFT_285400 [Phytophthora sojae]
Length = 211
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 11/126 (8%)
Query: 6 GKGAARVSQEALKPNDR--KVGKRKAATAKLD-----SGSKRQGKREKKAKKDPNKPKRP 58
G+ ++S E +P D KR+ K D S +G R+KK DPN PKR
Sbjct: 60 GRRWKKISDEERRPYDELAAADKRRYQEEKEDYVPDPSFETTKGSRKKK---DPNAPKRA 116
Query: 59 PSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+F F + R+ + ENPN ++ + +W+++ ++A Y+ E+ K +Y +
Sbjct: 117 LSAYFFFCNDIRQEVRDENPN-KKITEIATLLAERWRALPDKKRAKYQKMHEEAKVKYQQ 175
Query: 119 KMNAYN 124
+M+AYN
Sbjct: 176 QMDAYN 181
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R+ + KKD N PKR SAF F + R+T KKE P + A + G +WK +S E+
Sbjct: 14 RKPRKKKDKNAPKRALSAFMFFSNDIRETVKKEMPEL-AFLQISSEIGRRWKKISDEERR 72
Query: 104 PYESKAEKLKSEYGKKMNAY 123
PY+ A K Y ++ Y
Sbjct: 73 PYDELAAADKRRYQEEKEDY 92
>gi|426243524|ref|XP_004015604.1| PREDICTED: TOX high mobility group box family member 3 [Ovis aries]
Length = 541
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E ++R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 201 KSATPSPSSSINEEDADESNRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 256
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 257 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 315
Query: 122 AYNKKQV 128
AY V
Sbjct: 316 AYRASLV 322
>gi|395505933|ref|XP_003757291.1| PREDICTED: TOX high mobility group box family member 3-like
[Sarcophilus harrisii]
Length = 572
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E ++R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 206 KSATPSPSSSINEEDADESNRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 261
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 262 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 320
Query: 122 AYNKKQV 128
AY V
Sbjct: 321 AYRASLV 327
>gi|350585032|ref|XP_003127034.3| PREDICTED: TOX high mobility group box family member 3 [Sus scrofa]
Length = 578
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E ++R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 213 KSATPSPSSSINEEDADESNRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 268
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 269 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 327
Query: 122 AYNKKQV 128
AY V
Sbjct: 328 AYRASLV 334
>gi|212526742|ref|XP_002143528.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|212526744|ref|XP_002143529.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|210072926|gb|EEA27013.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|210072927|gb|EEA27014.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
Length = 103
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KKDPN PKR SA+ F E R+ + ENP + A A+G+ G WK +S +E+ PY
Sbjct: 16 EKRKKDPNAPKRGLSAYMFFANENRERVRDENPGI-AFGALGRKLGELWKGLSDSERKPY 74
Query: 106 ESKAEKLKSEYGKKMNAY 123
E KA K Y + Y
Sbjct: 75 EDKAAADKKRYEDQKATY 92
>gi|109469394|ref|XP_001076232.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392338825|ref|XP_003753645.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 214
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTASDDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K AY K
Sbjct: 145 EKKAAKLKEKYEKDTAAYRAK 165
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S V K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEVSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|403217833|emb|CCK72326.1| hypothetical protein KNAG_0J02470 [Kazachstania naganishii CBS
8797]
Length = 92
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR+ + KKDPN PKR SA+ F E R + ENP+VT +G+ G +WK++ +
Sbjct: 8 KRQTRRKKDPNAPKRALSAYMFFANENRDIVRSENPDVT-FGQIGRLLGERWKALDGEGR 66
Query: 103 APYESKAEKLKSEYGKKMNAY 123
PYE+KA K Y + Y
Sbjct: 67 EPYEAKAAADKKRYESEKELY 87
>gi|345793923|ref|XP_544407.3| PREDICTED: TOX high mobility group box family member 3 [Canis lupus
familiaris]
Length = 609
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E ++R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 238 KSATPSPSSSINEEDADESNRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 293
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 294 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 352
Query: 122 AYNKKQV 128
AY V
Sbjct: 353 AYRASLV 359
>gi|62362190|gb|AAX81532.1| amphiHMG1/2-like protein [Adineta ricciae]
Length = 142
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KKA KDPN PKRP SAFF+F ++ R KK++P+++ V + K G +WK +S + Y
Sbjct: 9 KKASKDPNAPKRPLSAFFLFSQDERPDIKKKSPSLS-VGDISKEIGSRWKKVSDDVRKRY 67
Query: 106 ESKAEKLKSEYGKKMNAYNK 125
E KA K +Y ++ Y K
Sbjct: 68 EQKAADEKKKYEVRVAEYKK 87
>gi|345569047|gb|EGX51916.1| hypothetical protein AOL_s00043g650 [Arthrobotrys oligospora ATCC
24927]
Length = 105
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R+ + ENP + A VGK G +WK+++ A++ PYE KA+
Sbjct: 21 DPNAPKRGLSAYMFFANEQRENVRAENPGI-AFGQVGKVLGERWKALTTAQRKPYEDKAK 79
Query: 111 KLKSEYGKKMNAY 123
K Y + AY
Sbjct: 80 ADKQRYEDEKIAY 92
>gi|397524101|ref|XP_003832048.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan paniscus]
Length = 130
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K K DPN PKRP S FF+F EF K NP ++ + V K G W +++ +EK PY
Sbjct: 20 KGGKNDPNAPKRPLSGFFLFCSEFCPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPY 78
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
+K KLK +Y K + Y K
Sbjct: 79 VTKVAKLK-KYEKDVADYKSK 98
>gi|427787117|gb|JAA59010.1| Putative dorsal switch protein 1 [Rhipicephalus pulchellus]
Length = 208
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+++K KDPN PKRP SAFF F + R ++ENP+ ++V V K G +W + KA
Sbjct: 85 KKRKRAKDPNAPKRPLSAFFWFCNDERPNVRQENPD-SSVGEVAKELGRRWNEVGDDVKA 143
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQVTNLVP 133
YE A K K+ Y K++ AY K+ P
Sbjct: 144 KYEGLAAKDKARYEKELKAYKGKKPKGASP 173
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEK 111
+KP+ SA+ F++ R+ KK++PN V A K +WK+MS EK + A+K
Sbjct: 5 DKPRGRMSAYAFFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMSDGEKKRFHQMADK 64
Query: 112 LKSEYGKKMNAY 123
K + +M Y
Sbjct: 65 DKKRFDTEMADY 76
>gi|37779034|gb|AAP20177.1| high mobility group protein [Pagrus major]
Length = 200
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F +FR K + P ++ + K G W S S EK PY
Sbjct: 85 KKRFKDPNAPKRPPSAFFLFCADFRPKVKGDYPGLS-IGDTAKKLGEMWNSSSAEEKQPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 144 EKKAAKLKEKYDKDIVAYRTK 164
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + + K +WK+MSP EK +E
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKRCSERWKTMSPKEKGKFEDM 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 AKLDKVRYEREMKNY 77
>gi|355693103|gb|EHH27706.1| hypothetical protein EGK_17974, partial [Macaca mulatta]
Length = 621
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPNKP++P SA+ +F + + K +NPN T V K W S+ +K Y+ K
Sbjct: 218 KDPNKPQKPVSAYALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKT 276
Query: 110 EKLKSEYGKKMNAYNKKQ 127
E K EY K + AY Q
Sbjct: 277 EAAKKEYLKALAAYKDNQ 294
>gi|339521847|gb|AEJ84088.1| TOX high mobility group box family member 4 [Capra hircus]
Length = 619
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 31 TAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAA 90
T +++G K++ + +K KKDPN+P++P SA+ +F + + K +NPN T V K
Sbjct: 200 TVVVEAGKKQKAPKRRK-KKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT-FGEVSKIV 257
Query: 91 GGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
W S+ K + K E K EY K + AY Q
Sbjct: 258 ASMWDSLGEERKQVCKRKTEAAKKEYLKALAAYKDNQ 294
>gi|332025497|gb|EGI65660.1| High mobility group protein DSP1 [Acromyrmex echinatior]
Length = 305
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+++K KD N PKR SAFF F + R K NP V + K G KW P K+
Sbjct: 192 KKRKHIKDHNAPKRSLSAFFWFCNDERGKVKMLNPEY-GVGDIAKELGKKWSDADPETKS 250
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQVTNLVPFFNSVDAFGSLL 145
YE+ AEK K+ Y ++M AY KK + P A + +
Sbjct: 251 KYEAMAEKDKARYEREMTAYKKKMQNDGAPMVGGAQANQTTI 292
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAV-SAVGKAAGGKWKSMSPAEKAPYESKAEK 111
+KP+ +A+ F++ R+ KK++P V K +WK+MS EK + AEK
Sbjct: 109 SKPRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDIEKKRFHEMAEK 168
Query: 112 LKSEYGKKMNAYN 124
K Y +M Y
Sbjct: 169 DKKRYDTEMQNYT 181
>gi|223649078|gb|ACN11297.1| FACT complex subunit SSRP1 [Salmo salar]
Length = 711
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
+REKK +KD N PKRP S++ ++L R+ K ENP + +++ + K AG WK + +K
Sbjct: 532 RREKK-QKDTNAPKRPMSSYMLWLNSSRERIKSENPGI-SITEISKKAGEMWKQIGKEDK 589
Query: 103 APYESKAEKLKSEYGKKMNAY 123
++ KAE+ K Y K M Y
Sbjct: 590 EEWDGKAEEAKKNYEKAMKEY 610
>gi|395858039|ref|XP_003801382.1| PREDICTED: FACT complex subunit SSRP1 [Otolemur garnettii]
Length = 710
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K +DPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EVKKGRDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|444722397|gb|ELW63094.1| High mobility group protein B1 [Tupaia chinensis]
Length = 178
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEPPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYDKDIAAYRAK 165
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKE-NPNVTAVSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ ++ KK + +V S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCQEEHKKHPDASVNNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKAPYEREMKTY 78
>gi|355563197|gb|EHH19759.1| hypothetical protein EGK_02478, partial [Macaca mulatta]
Length = 121
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 23 KVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA 82
K K T + D G + GK DPN PKRP S FF+F EF K NP ++
Sbjct: 3 KADKVHNDTERKDYGPAKGGKN-----NDPNAPKRPLSGFFLFCSEFHPKMKSTNPGIS- 56
Query: 83 VSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
+ V K G WK+++ +EK PY +K KL
Sbjct: 57 IGDVAKKLGEMWKNLNDSEKQPYVTKVAKL 86
>gi|145356938|ref|XP_001422680.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582923|gb|ABP00997.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 622
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
+AKKDPN PKR SA+ F R NP+ V+ V KA G KWK+++ EK+ Y+
Sbjct: 515 RAKKDPNAPKRGLSAYMFFSAAKRAEITAANPSF-GVTDVAKALGEKWKTITDEEKSVYQ 573
Query: 107 SKAEKLKSEYGKKMNAY 123
+A++ K Y ++M AY
Sbjct: 574 QQADEDKIRYEREMEAY 590
>gi|444728196|gb|ELW68660.1| High mobility group protein B1 [Tupaia chinensis]
Length = 221
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ V K G W + + +K PY
Sbjct: 101 KKKFKDPNAPKRPPSAFFLFCSEYRSKIKGEHPGLSN-GDVAKKLGEIWNNTAADDKQPY 159
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 160 EKKAAKLKEKYEKDIAAYRAK 180
>gi|443897201|dbj|GAC74542.1| putative N2 [Pseudozyma antarctica T-34]
Length = 1388
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA------ 89
S ++ GK K KDPN PK+P SA+F+FL R +PN+T G+
Sbjct: 1290 SAQRKAGKSRKGNLKDPNAPKKPLSAYFLFLRAIRA-----DPNMTQAVFEGEQETTKQS 1344
Query: 90 --AGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
A KW+S+S EK PY +AE K+ Y + Y
Sbjct: 1345 VLAAAKWRSLSETEKQPYLDRAEADKARYERLRREY 1380
>gi|300677966|gb|ADK27290.1| high-mobility-group B1a [Gekko japonicus]
Length = 215
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K E+P ++ + V K G W + + +K P+
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLS-IGDVAKKLGEMWNNTAGDDKQPF 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 EMAKGDKVRYEREMKNY 78
>gi|68061725|ref|XP_672863.1| high mobility group protein [Plasmodium berghei strain ANKA]
gi|68076125|ref|XP_679982.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56490279|emb|CAI01706.1| high mobility group protein, putative [Plasmodium berghei]
gi|56500842|emb|CAH99000.1| hypothetical protein PB001601.02.0 [Plasmodium berghei]
Length = 98
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVT-AVSAVGKAAGGKWKSMSPAEKAPYESKA 109
DP PKR SA+ ++++ R +E P + V+ VGK G W ++PA+KAPYE KA
Sbjct: 20 DPLAPKRALSAYMFYVKDKRLEIIQERPELAKEVAQVGKLIGEAWGQLTPAQKAPYEKKA 79
Query: 110 EKLKSEYGKKMNAYNK 125
E K Y K++ Y K
Sbjct: 80 ELDKVRYSKEIEEYRK 95
>gi|326927243|ref|XP_003209802.1| PREDICTED: TOX high mobility group box family member 3-like
[Meleagris gallopavo]
Length = 573
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E ++R G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 204 KSATPSPSSSINEEDADESNRATGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 259
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 260 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 318
Query: 122 AYNKKQV 128
AY V
Sbjct: 319 AYRASLV 325
>gi|154323226|ref|XP_001560927.1| hypothetical protein BC1G_00012 [Botryotinia fuckeliana B05.10]
Length = 438
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
G+KR+ +R K D + P+RPPSA+ +F + R+ K + + + K G W++
Sbjct: 118 GAKRKYRRHPKP--DESAPERPPSAYVIFSNKMREDLKGR---ALSFTEIAKLVGENWQN 172
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
+SP+EK PYE +A K Y ++ Y K Q
Sbjct: 173 LSPSEKEPYEHQAYTAKERYNNELAEYKKTQ 203
>gi|171696076|ref|XP_001912962.1| hypothetical protein [Podospora anserina S mat+]
gi|170948280|emb|CAP60444.1| unnamed protein product [Podospora anserina S mat+]
Length = 478
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 8/112 (7%)
Query: 14 QEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTF 73
Q+A +P+ + R A + +KR+ +R K D N P+RPPSA+ +F + R+
Sbjct: 83 QDAQRPDASRQDARDAGVLVV---TKRKYRRHPKP--DENAPERPPSAYVLFSNKMREEL 137
Query: 74 KKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
K N + T ++ K G W+S++ +EK PYES+A+ +K +Y + Y K
Sbjct: 138 KGRNLSFTEIA---KLVGENWQSLNASEKEPYESQAQAIKEKYLSDLAEYKK 186
>gi|71662243|ref|XP_818131.1| high mobility group protein [Trypanosoma cruzi strain CL Brener]
gi|70883364|gb|EAN96280.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KD N PKR SA+F F+ +FR K++P+++ V+ KAAG WK++S K PYE+ A
Sbjct: 200 KDENAPKRSMSAYFFFVSDFR----KKHPDLS-VTETSKAAGAAWKALSDDMKKPYEAMA 254
Query: 110 EKLKSEYGKKMNA 122
+K K Y ++M A
Sbjct: 255 QKDKERYQREMAA 267
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 26 KRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENP---NVTA 82
K+++A+A D +R K KK KK + PK S + +F + R K++NP N
Sbjct: 89 KKRSASAAAD---ERNAKVNKKEKKPDDYPKAALSPYILFGNDHRDKVKEQNPGMKNTEI 145
Query: 83 VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+ ++GK W S A K Y+ AE K + ++++ Y K
Sbjct: 146 LQSLGKM----WAEASDAVKEKYKKLAEDDKKRFDRELSEYKK 184
>gi|353351504|emb|CBX36444.1| high-mobility-group-1 protein [Plecoglossus altivelis]
Length = 204
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F +FR K E P T + V K G W +K PY
Sbjct: 85 KKRFKDPNAPKRPPSAFFIFCADFRAKVKGETPGPT-IGDVAKKLGEMWNGTCAEDKQPY 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK-QVTNLVP 133
E KA KLK +Y K + AY K +V VP
Sbjct: 144 EKKAAKLKEKYEKDIAAYRAKGKVGVAVP 172
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
KDP KP+ S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 3 KDPTKPRGKTSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 AKLDKVRYEREMKNY 77
>gi|332375054|gb|AEE62668.1| unknown [Dendroctonus ponderosae]
Length = 306
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
G K++GK+ K+ K DPN PKR SAFF F + R K +NP V + K G +W
Sbjct: 193 GEKQRGKKRKQIK-DPNAPKRSLSAFFWFSNDERGKVKAQNPEY-GVGDIAKELGRRWAD 250
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
P ++ +E+ A+K K Y K+M AY KK
Sbjct: 251 ADPEVRSKFEALADKDKIRYEKEMTAYKKK 280
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
KK +KP+ +A+ F++ R+ KK++P V A K +WK+M EK +
Sbjct: 113 KKGDSKPRGRMTAYAFFVQTCREEHKKKHPEENVVFAEFSKKCAERWKTMLDKEKKRFHE 172
Query: 108 KAEKLKSEYGKKMNAY 123
AE K Y +M +Y
Sbjct: 173 MAETDKKRYDTEMQSY 188
>gi|115459940|ref|NP_001053570.1| Os04g0564600 [Oryza sativa Japonica Group]
gi|38345400|emb|CAE03091.2| OSJNBa0017B10.6 [Oryza sativa Japonica Group]
gi|113565141|dbj|BAF15484.1| Os04g0564600 [Oryza sativa Japonica Group]
gi|116309704|emb|CAH66751.1| H0409D10.9 [Oryza sativa Indica Group]
gi|116309707|emb|CAH66753.1| OSIGBa0158F05.2 [Oryza sativa Indica Group]
gi|125549359|gb|EAY95181.1| hypothetical protein OsI_16998 [Oryza sativa Indica Group]
gi|149391231|gb|ABR25633.1| hmg1/2-like protein [Oryza sativa Indica Group]
gi|213959192|gb|ACJ54930.1| HMG protein [Oryza sativa Japonica Group]
gi|215767864|dbj|BAH00093.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629376|gb|EEE61508.1| hypothetical protein OsJ_15798 [Oryza sativa Japonica Group]
gi|323388963|gb|ADX60286.1| HMG transcription factor [Oryza sativa Japonica Group]
Length = 132
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A D+ K GKR+K KPKR + FF FL EFR + +++PN V+AV KAAG
Sbjct: 4 ADADAEFKAAGKRKKAGG--AGKPKRGLTPFFAFLAEFRPQYMEKHPNTKGVAAVTKAAG 61
Query: 92 GKWKSMSPAEKAPYESK 108
KW++MS EKA Y K
Sbjct: 62 EKWRAMSDEEKAQYGGK 78
>gi|322706965|gb|EFY98544.1| high-mobility group 20A [Metarhizium anisopliae ARSEF 23]
Length = 460
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 26 KRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA 85
KR ++ +S + K + K D N P+RPPSA+ +F + R+T K N T ++
Sbjct: 91 KRDSSRTVAESNGVTKRKYRRHPKPDENSPERPPSAYVLFSNKMRETLKDHNLTFTEIA- 149
Query: 86 VGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
K G W+S+ P EK +ES+A K +Y +++ Y K
Sbjct: 150 --KLVGENWQSLRPEEKDVFESQANFAKEKYNRELTEYKK 187
>gi|300677968|gb|ADK27291.1| high-mobility-group B1b [Gekko japonicus]
Length = 215
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK +DPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFEDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|402086642|gb|EJT81540.1| hypothetical protein GGTG_01518 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 481
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 13 SQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKT 72
S E + +D + + A A +KR+ +R KA D N P+RPPSA+ +F + R
Sbjct: 80 SLEEQQRHDAQRAETPRADATAGVATKRKYRRHPKA--DENAPERPPSAYVLFSNKMRDD 137
Query: 73 FKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
K ++ T ++ K G W++++P+EK PYE++A+ K +Y + Y +
Sbjct: 138 LKDQHLTFTEIA---KLVGEHWQALAPSEKEPYETQAQTAKDKYNHDLAEYKR 187
>gi|321478856|gb|EFX89813.1| hypothetical protein DAPPUDRAFT_232871 [Daphnia pulex]
Length = 190
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R++K KDPN PKR SAFF F + R K +P T V + K G +W + + K+
Sbjct: 91 RKRKQVKDPNAPKRSLSAFFWFCNDERGNVKAAHPEYT-VGDIAKDLGKQWGEVDESTKS 149
Query: 104 PYESKAEKLKSEYGKKMNAYNKK 126
YE+ AEK K+ Y ++ NAY KK
Sbjct: 150 KYEAMAEKDKARYERENNAYKKK 172
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV-SAVGKAAGGKWKSMSPAEKAPY 105
+AK D NKP+ +A+ F++ R+ KK++P+ V S K +WK+MS EK +
Sbjct: 3 RAKADANKPRGRMTAYAFFVQTCREEHKKKHPDENVVFSEFSKKCAERWKTMSDKEKKRF 62
Query: 106 ESKAEKLKSEYGKKMNAY 123
+ AE+ K + +M Y
Sbjct: 63 QEMAERDKVRFDDEMRHY 80
>gi|412985385|emb|CCO18831.1| CG4797 [Bathycoccus prasinos]
Length = 669
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK +KDPN PKRP S + +F E R K+ENP+ + ++ V K G +WKS++ EK Y
Sbjct: 571 KKKEKDPNAPKRPLSTYMIFSAEMRAKVKEENPDFS-ITDVAKELGVRWKSVTDEEKVKY 629
Query: 106 ESKAEKLK 113
E A+K K
Sbjct: 630 EELAKKDK 637
>gi|45935025|gb|AAS79547.1| At4g11080 [Arabidopsis thaliana]
gi|46367464|emb|CAG25858.1| hypothetical protein [Arabidopsis thaliana]
Length = 450
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
Query: 14 QEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKK-DPNKPKRPPSAFFVFLEEFRKT 72
QEAL+ + K+K T + +K K +KK + DPNKPK+P S++F+F ++ RK+
Sbjct: 339 QEALQ-----LLKKKEKTDNIIKKTKETAKNKKKNENVDPNKPKKPTSSYFLFCKDARKS 393
Query: 73 FKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+E+P + S V KW + EK Y SKA L Y K++ YNK
Sbjct: 394 VLEEHPGINN-STVTAHITLKWMELGEEEKQVYNSKAAALMEAYKKEVEEYNK 445
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPK+P SA+ ++ E R K EN +V V K G +WK++S +KAPY+ A+
Sbjct: 246 DPLKPKQPISAYLIYANERRAALKGENKSVI---EVAKITGEEWKNLSEEQKAPYDKMAK 302
Query: 111 KLKSEYGKKMNAY 123
K K Y ++M Y
Sbjct: 303 KNKEIYLQEMEGY 315
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 56 KRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSE 115
KRP + + ++ ++ KK+NP+ G KWK +S EK PYE K + K
Sbjct: 134 KRPSTPYILWCKDNWNEVKKQNPDAD-FKETSNILGAKWKGISAEEKKPYEEKYQADKEA 192
Query: 116 Y 116
Y
Sbjct: 193 Y 193
>gi|186701221|gb|ACC91248.1| high mobility group HMG1/2 family protein [Arabidopsis halleri]
Length = 456
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPK+P S++F+F ++ RK +E P T S V KWK + EK Y KA
Sbjct: 375 DPNKPKKPASSYFLFSKDERKRLIEERPG-TNNSTVTALISVKWKELGEEEKQVYNKKAA 433
Query: 111 KLKSEYGKKMNAYNKK 126
KL Y K++ AYNKK
Sbjct: 434 KLMEAYKKEVEAYNKK 449
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPK P SAF V+ E R ++++ +V V K G +WK++S +KAPYE A+
Sbjct: 251 DPLKPKHPVSAFLVYANERRAALREDSKSVV---EVAKITGEEWKNLSDKKKAPYEEVAK 307
Query: 111 KLKSEYGKKMNAY 123
K K Y + M Y
Sbjct: 308 KNKETYLQAMEEY 320
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
Q K KK KKD + KRP S++ ++ ++ KK+NP G KWKS+S
Sbjct: 124 QEKANKKKKKDCPETKRPSSSYVLWCKDQWAEVKKQNPEAD-FKETSNILGTKWKSLSAE 182
Query: 101 EKAPYESKAEKLKSEY 116
+K PYE K + K Y
Sbjct: 183 DKKPYEEKYQVEKEAY 198
>gi|296227498|ref|XP_002759405.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 215
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK +DPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFEDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGKMWSNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|145233003|ref|XP_001399874.1| non-histone chromosomal protein 6 [Aspergillus niger CBS 513.88]
gi|317026969|ref|XP_003188583.1| non-histone chromosomal protein 6 [Aspergillus niger CBS 513.88]
gi|134056796|emb|CAK37704.1| unnamed protein product [Aspergillus niger]
gi|350634700|gb|EHA23062.1| hypothetical protein ASPNIDRAFT_206990 [Aspergillus niger ATCC
1015]
Length = 103
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
++ KKDPN PKR SA+ F + R+ ++ENP ++ VGK G +WK++S ++ PY
Sbjct: 16 ERRKKDPNAPKRGLSAYMFFANDNREKVREENPGIS-FGQVGKMLGERWKALSDTDRRPY 74
Query: 106 ESKAEKLKSEYGKKMNAYN 124
E KA K Y + +YN
Sbjct: 75 EEKAAADKKRYEDEKASYN 93
>gi|164661201|ref|XP_001731723.1| hypothetical protein MGL_0991 [Malassezia globosa CBS 7966]
gi|159105624|gb|EDP44509.1| hypothetical protein MGL_0991 [Malassezia globosa CBS 7966]
Length = 97
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 43/85 (50%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
G R KAKKDP PKRP SA+ F +++R K +V VG+ G KWK MS E
Sbjct: 12 GTRRTKAKKDPAAPKRPLSAYMFFSQDWRDASKPRTLTQDSVCDVGRLLGTKWKEMSDEE 71
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKK 126
K PY A K K + AY K
Sbjct: 72 KKPYVEMASKDKERAESEKAAYANK 96
>gi|358372276|dbj|GAA88880.1| nucleosome binding protein (Nhp6a) [Aspergillus kawachii IFO 4308]
Length = 104
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
++ KKDPN PKR SA+ F + R+ ++ENP ++ VGK G +WK++S ++ PY
Sbjct: 17 ERRKKDPNAPKRGLSAYMFFANDNREKVREENPGIS-FGQVGKMLGERWKALSDTDRRPY 75
Query: 106 ESKAEKLKSEYGKKMNAYN 124
E KA K Y + +YN
Sbjct: 76 EEKAAADKKRYEDEKASYN 94
>gi|392574245|gb|EIW67382.1| hypothetical protein TREMEDRAFT_74569 [Tremella mesenterica DSM
1558]
Length = 351
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
+DPN PKRPPSA+ +F E R +K NP + +G + KWK +S +K YE
Sbjct: 130 RDPNAPKRPPSAYIMFQNEVRDQMRKTNPEIAYKEVLGMIS-QKWKDLSDEQKRVYE--- 185
Query: 110 EKLKSEYGKKMNAYN 124
+EY K++N YN
Sbjct: 186 ----TEYAKQVNGYN 196
>gi|213959194|gb|ACJ54931.1| HMG protein [Oryza sativa Japonica Group]
Length = 131
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A D+ K GKR+K KPKR + FF FL EFR + +++PN V+AV KAAG
Sbjct: 4 ADADAEFKAAGKRKKAGG--AGKPKRGLTPFFAFLAEFRPQYMEKHPNTKGVAAVTKAAG 61
Query: 92 GKWKSMSPAEKAPYESK 108
KW++MS EKA Y K
Sbjct: 62 EKWRAMSDEEKAQYGGK 78
>gi|425767422|gb|EKV05996.1| Non-histone chromosomal protein 6 [Penicillium digitatum PHI26]
gi|425779648|gb|EKV17689.1| Non-histone chromosomal protein 6 [Penicillium digitatum Pd1]
Length = 189
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR ++ KKDPN PKR SA+ F + R ++ENP ++ VGK G KWK++S ++
Sbjct: 97 KRVQRRKKDPNAPKRGLSAYMFFANDNRDKVREENPGIS-FGQVGKQLGDKWKALSETDR 155
Query: 103 APYESKAEKLKSEYGKKMNAY 123
PY++KA K Y ++ AY
Sbjct: 156 KPYDAKAAADKKRYEEEKAAY 176
>gi|380471591|emb|CCF47205.1| HMG box protein [Colletotrichum higginsianum]
Length = 513
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 5/115 (4%)
Query: 11 RVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFR 70
R + E KP ++ + + +KR+ +R K D N P+RPPSA+ +F + R
Sbjct: 74 RATAEEPKPEAQRPEQPRPEVKDGPVVTKRKYRRHPKP--DENAPERPPSAYVLFSNKMR 131
Query: 71 KTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
K N T ++ K G W++++P EK PYES A K K +Y + Y K
Sbjct: 132 DDLKGRNLTFTEIA---KLVGEHWQNLTPGEKEPYESSALKAKEKYNHDLAEYKK 183
>gi|350402647|ref|XP_003486555.1| PREDICTED: high mobility group protein DSP1-like [Bombus impatiens]
Length = 456
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
SK +GK+ K K D N PKR SAFF F + R K NP V + K G KW
Sbjct: 342 SKGRGKKRKHIK-DHNAPKRSLSAFFWFCNDERGKVKMLNPEF-GVGDIAKELGKKWSDA 399
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
P K+ YE+ AEK K+ Y ++M AY KK
Sbjct: 400 DPETKSKYEAMAEKDKARYEREMTAYKKK 428
Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV-SAVGKAAGGKWKSMSPAE 101
+R+ + +KP+ +A+ F++ R+ KK++P V K +WK+MS E
Sbjct: 254 QRDNMPRGKDSKPRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDKE 313
Query: 102 KAPYESKAEKLKSEYGKKMNAYN 124
K + AEK K Y +M Y
Sbjct: 314 KKRFHEMAEKDKKRYDAEMQNYT 336
>gi|320589146|gb|EFX01608.1| chromatin-associated protein [Grosmannia clavigera kw1407]
Length = 593
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query: 14 QEALKPNDRKVGKRKAATAKLDS-----GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEE 68
+EA++P + + K ++ +D G + K + K D P+RPPSA+ +F +
Sbjct: 78 EEAIRPEN--IQKHDSSNYTVDGRGTVPGVLAKRKYRRHPKPDECAPERPPSAYVLFSNK 135
Query: 69 FRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
R+ K +N + T ++ K G W++++PAE+ PYE++A+ K +Y M Y K
Sbjct: 136 MREKLKGQNLSFTEIA---KLVGENWQTLTPAERKPYETEAQAAKDKYNHAMVVYKK 189
>gi|119596659|gb|EAW76253.1| hCG2042470 [Homo sapiens]
Length = 118
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K K DPN PKRP S FF+F EF K NP ++ + V K G W +++ +EK PY
Sbjct: 8 KGGKNDPNAPKRPLSGFFLFCSEFCPKIKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPY 66
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
+K KLK +Y K + Y K
Sbjct: 67 VTKVAKLK-KYEKDVADYKSK 86
>gi|157129203|ref|XP_001655323.1| high mobility group B1, putative [Aedes aegypti]
gi|108872320|gb|EAT36545.1| AAEL011380-PA [Aedes aegypti]
Length = 278
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+KA KDPN PKR SAFF F + R K NP V + K G KW M K+ Y
Sbjct: 123 RKAFKDPNAPKRSLSAFFWFCHDERNKVKALNPEY-GVGDIAKELGRKWSDMDAEVKSKY 181
Query: 106 ESKAEKLKSEYGKKMNAY 123
E AEK K+ Y ++M Y
Sbjct: 182 EQMAEKDKARYEQEMTEY 199
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEK 111
NKP+ +A+ F++ R+ KK++P + A + +WK+M EK + AEK
Sbjct: 38 NKPRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHEMAEK 97
Query: 112 LKSEYGKKMNAY 123
K Y +M Y
Sbjct: 98 DKQRYELEMQNY 109
>gi|82952271|ref|XP_889413.1| PREDICTED: high mobility group protein B1-like isoform 2 [Mus
musculus]
gi|407263905|ref|XP_003945567.1| PREDICTED: high mobility group protein B1-like isoform 1 [Mus
musculus]
Length = 215
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 43 KREKKAK-KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
KRE K K KDPN PKRPPSAFF+F +R K E+P ++ + V K G W + + +
Sbjct: 82 KRETKKKFKDPNAPKRPPSAFFLFCSGYRPKIKGEHPGLS-IGDVAKKRGEMWNNTAADD 140
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKK 126
K PYE KA KLK +Y K + AY K
Sbjct: 141 KQPYEKKAAKLKEKYEKDIAAYRAK 165
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP K + S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A K+ Y ++M Y
Sbjct: 63 MAIADKARYEREMKTY 78
>gi|70953373|ref|XP_745792.1| high mobility group protein [Plasmodium chabaudi chabaudi]
gi|56526224|emb|CAH87922.1| high mobility group protein, putative [Plasmodium chabaudi
chabaudi]
Length = 98
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVT-AVSAVGKAAGGKWKSMSPAEKAPYESKA 109
DP PKR SA+ ++++ R +E P + V+ VGK G W ++PA+KAPYE KA
Sbjct: 20 DPLAPKRALSAYMFYVKDKRLEIIQERPELAKEVAQVGKLIGEAWGQLTPAQKAPYEKKA 79
Query: 110 EKLKSEYGKKMNAYNK 125
E K Y K++ Y K
Sbjct: 80 ELDKVRYSKEIEEYKK 95
>gi|349806433|gb|AEQ18689.1| putative ssrp1 protein [Hymenochirus curtipes]
Length = 280
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+E K KDP+ PKRP SA+ +L R+ K ENP ++ ++ + K AG WKSM+ +K
Sbjct: 200 QESKNNKDPSAPKRPMSAYMPWLNASREKIKGENPGIS-ITDLSKKAGEIWKSMNREKKE 258
Query: 104 PYESKAEKLKSEYGKKMNAY 123
++ +AE+ K +Y K M Y
Sbjct: 259 EWDRRAEEAKRDYEKAMKEY 278
>gi|384491850|gb|EIE83046.1| hypothetical protein RO3G_07751 [Rhizopus delemar RA 99-880]
Length = 101
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 31 TAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAA 90
TAK + K+ +++KKDP+ PKR SA+ F ++ R T K+ENP + +GK
Sbjct: 9 TAKRAAKDDNDTKKARRSKKDPSAPKRGLSAYMFFSQDQRPTVKEENPKAS-FGEIGKIL 67
Query: 91 GGKWKSMSPAEKAPYESKAEKLKSEY 116
G +WK++S EK PY KAE K Y
Sbjct: 68 GERWKALSEEEKKPYLKKAEDDKKRY 93
>gi|312103870|ref|XP_003150264.1| HMG box family protein [Loa loa]
Length = 253
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 30 ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
+T ++ + R+ R+K++KKDPN+P++P SA+ +F + + K +PN + V K
Sbjct: 85 STDQMTNRISRRTIRKKRSKKDPNEPQKPVSAYALFFRDTQAAIKGRSPNA-SFGEVSKI 143
Query: 90 AGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQVT 129
W ++ K Y+ + E K +Y KK+ AY +Q++
Sbjct: 144 VASMWDTLDCHAKNLYKQRTEIAKKDYLKKLAAYRAQQIS 183
>gi|71416266|ref|XP_810170.1| high mobility group protein [Trypanosoma cruzi strain CL Brener]
gi|70874664|gb|EAN88319.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KD N PKR SA+F F+ +FR K++P+++ V+ KAAG WK +S K PYE+ A
Sbjct: 200 KDENAPKRSMSAYFFFVSDFR----KKHPDLS-VTETSKAAGAAWKELSDEMKKPYEAMA 254
Query: 110 EKLKSEYGKKMNA 122
+K K Y ++M A
Sbjct: 255 QKDKERYQREMAA 267
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 26 KRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA 85
K+++A+A D +R K KK KK + PK S + +F + R K++NP + +
Sbjct: 89 KKRSASAAAD---ERNAKVNKKEKKPDDYPKAALSPYILFGNDHRDKVKEQNPEMKN-TE 144
Query: 86 VGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+ ++ G W S A K Y+ AE K + ++++ Y K
Sbjct: 145 ILQSLGKMWAEASDAVKEKYKKLAEDDKKRFDRELSEYKK 184
>gi|221053558|ref|XP_002258153.1| high mobility group protein (HMG protein) [Plasmodium knowlesi
strain H]
gi|193807986|emb|CAQ38690.1| high mobility group protein (HMG protein),putative [Plasmodium
knowlesi strain H]
Length = 99
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAE 101
K+ K+ KKDP PKR SA+ ++++ R KE P + V+ VGK G W +S A+
Sbjct: 12 KQNKRKKKDPLAPKRALSAYMFYVKDKRLELIKEKPELARNVAQVGKLVGEAWGKLSAAQ 71
Query: 102 KAPYESKAEKLKSEYGKKMNAYNK 125
K PYE KA+ K Y K++ Y K
Sbjct: 72 KTPYEKKAQLDKVRYSKEIEEYRK 95
>gi|60552474|gb|AAH91486.1| SSRP1 protein, partial [Homo sapiens]
Length = 633
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + +Y K M Y
Sbjct: 596 WDRKAEDARRDYEKAMKEY 614
>gi|82753906|ref|XP_727864.1| high mobility group protein [Plasmodium yoelii yoelii 17XNL]
gi|23483924|gb|EAA19429.1| high mobility group protein [Plasmodium yoelii yoelii]
Length = 126
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVT-AVSAVGKAAGGKWKSMSPAEKAPYESKA 109
DP PKR SA+ ++++ R +E P + V+ VGK G W ++PA+KAPYE KA
Sbjct: 48 DPLAPKRALSAYMFYVKDKRLEIIQERPELAKEVAQVGKLIGEAWGQLTPAQKAPYEKKA 107
Query: 110 EKLKSEYGKKMNAYNK 125
E K Y K++ Y K
Sbjct: 108 ELDKVRYSKEIEEYRK 123
>gi|297688746|ref|XP_002821837.1| PREDICTED: FACT complex subunit SSRP1 isoform 2 [Pongo abelii]
Length = 709
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + +Y K M Y
Sbjct: 596 WDRKAEDARRDYEKAMKEY 614
>gi|189442849|gb|AAI67799.1| TOX high mobility group box family member 3 [synthetic construct]
Length = 589
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 206 KSATPSPSSSINEEDADEANRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 261
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 262 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 320
Query: 122 AYNKKQV 128
AY V
Sbjct: 321 AYRASLV 327
>gi|444722008|gb|ELW62714.1| High mobility group protein B1 [Tupaia chinensis]
Length = 224
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF F E+R K E+P ++ + V K G W + + K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFFFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWSNTAADAKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K +P KP+ S++ F++ R+ KK++P+ + S K +WK++S EK +E
Sbjct: 3 KGNPTKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTVSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|190194224|ref|NP_001121758.1| epidermal Langerhans cell protein-like [Danio rerio]
gi|161611626|gb|AAI55840.1| Zgc:175137 protein [Danio rerio]
Length = 583
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+P++P SA+ +F + + K +NPN T V K W S+ +K Y+ KAE
Sbjct: 253 DPNEPQKPVSAYALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKAE 311
Query: 111 KLKSEYGKKMNAYNKKQVT 129
K+EY K + AY +Q++
Sbjct: 312 AAKTEYLKALAAYKAEQLS 330
>gi|297461758|ref|XP_885168.3| PREDICTED: TOX high mobility group box family member 3 isoform 2
[Bos taurus]
gi|297485262|ref|XP_002694823.1| PREDICTED: TOX high mobility group box family member 3 [Bos taurus]
gi|296478066|tpg|DAA20181.1| TPA: TOX high mobility group box family member 3-like [Bos taurus]
Length = 556
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 206 KSATPSPSSSINEEDADETNRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 261
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 262 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 320
Query: 122 AYNKKQV 128
AY V
Sbjct: 321 AYRASLV 327
>gi|402908366|ref|XP_003916917.1| PREDICTED: TOX high mobility group box family member 3 [Papio
anubis]
Length = 556
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 170 KSATPSPSSSINEEDADEANRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 225
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 226 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 284
Query: 122 AYNKKQV 128
AY V
Sbjct: 285 AYRASLV 291
>gi|410057780|ref|XP_003954279.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1 [Pan
troglodytes]
Length = 709
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + +Y K M Y
Sbjct: 596 WDRKAEDARRDYEKAMKEY 614
>gi|442755991|gb|JAA70155.1| Putative dorsal switch protein 1 [Ixodes ricinus]
Length = 207
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+++K KDPN PKRP SAFF F + R ++E+P+ + V V K G +W + K+
Sbjct: 85 KKRKRTKDPNAPKRPLSAFFWFCNDERPNVRQESPDAS-VGEVAKELGRRWNDVGDDTKS 143
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQVTNLVP 133
YE A K K+ Y K++ AY K+ P
Sbjct: 144 KYEGLAAKDKARYEKELKAYKNKKTKGASP 173
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEK 111
+KP+ SA+ F++ R+ KK++P V A K +WK+MS EK + A+K
Sbjct: 5 DKPRGRMSAYAFFVQTCREEHKKKHPTENVVFAEFSKKCAERWKTMSDGEKKRFHQMADK 64
Query: 112 LKSEYGKKMNAY 123
K + +M Y
Sbjct: 65 DKKRFDSEMADY 76
>gi|355766483|gb|EHH62519.1| hypothetical protein EGM_20887 [Macaca fascicularis]
Length = 198
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
D N PKRPPS FF+F +F K NP ++ + + K G WK+++ +EK PY +KA
Sbjct: 76 DSNAPKRPPSGFFLFSSKFCPKMKSTNPGIS-IGDMVKKLGEMWKNLNDSEKQPYITKAA 134
Query: 111 KLKSEYGK 118
KLK +Y K
Sbjct: 135 KLKDKYEK 142
>gi|310790717|gb|EFQ26250.1| HMG box protein [Glomerella graminicola M1.001]
Length = 500
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K + K D N P+RPPSA+ +F + R K N T ++ K G W++++P EK
Sbjct: 104 KYRRHPKPDENAPERPPSAYVLFSNKMRDDLKGRNLTFTEIA---KLVGEHWQNLTPGEK 160
Query: 103 APYESKAEKLKSEYGKKMNAYNK 125
PYE+ A K K +Y + Y K
Sbjct: 161 EPYETSALKAKEKYNHDLAEYKK 183
>gi|27466905|gb|AAO12859.1| high mobility group protein [Branchiostoma belcheri tsingtauense]
Length = 164
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G R K+ KKDPN PKR SAFF++ + R + +P+ V + K G +WK +S +
Sbjct: 84 EGGRRKRKKKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQ-VGDIAKILGKQWKEISDS 142
Query: 101 EKAPYESKAEKLKSEYGKKM 120
+KA YE KA+ ++ Y K++
Sbjct: 143 DKAKYEKKAQTERARYQKEL 162
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV-SAVGKAAGGKWKSMSPAEKAPYESK 108
KD NKPK SA+ F++E R+ +K+ PN V + + +WK+M+ EK ++
Sbjct: 3 KDKNKPKGKMSAYACFVQECRREHEKKYPNKQVVFTEFSQKCASRWKTMNDDEKKRFQVL 62
Query: 109 AEKLKSEYGKKMNAY 123
AE K Y + M Y
Sbjct: 63 AEADKRRYEQNMAKY 77
>gi|110766132|ref|XP_001120264.1| PREDICTED: FACT complex subunit Ssrp1 [Apis mellifera]
Length = 728
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
+KD NKPKRPP+AF ++L R+ K ENP + AV+ + K G W+ + +K+ +E K
Sbjct: 543 EKDTNKPKRPPTAFMMWLNSARERIKAENPGI-AVTEIAKKGGEMWRELK--DKSEWEQK 599
Query: 109 AEKLKSEYGKKMNAY 123
A K K +Y M Y
Sbjct: 600 AAKAKKDYSASMKEY 614
>gi|3600053|gb|AAC35540.1| contains similarity to HMG (high mobility group) box (Pfam:
HMG_box.hmm, scores: 70.67, 53.09 and 80.15)
[Arabidopsis thaliana]
Length = 401
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 35 DSGSKRQGKREKKAKK-DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGK 93
D +K K +KK + DPNKPK+P S++F+F ++ RK+ +E+P + S V K
Sbjct: 306 DQKTKETAKNKKKNENVDPNKPKKPTSSYFLFCKDARKSVLEEHPGINN-STVTAHISLK 364
Query: 94 WKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQVTN 130
W + EK Y SKA +L Y K++ YNK + ++
Sbjct: 365 WMELGEEEKQVYNSKAAELMEAYKKEVEEYNKTKTSS 401
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 12/83 (14%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP KPK+P SA+ ++ E R K EN +V V K AG +WK++S +KAPY+ K
Sbjct: 254 DPLKPKQPISAYLIYANERRAALKGENKSVI---EVAKMAGEEWKNLSEEKKAPYDQKT- 309
Query: 111 KLKSEYGKKMNAYNKKQVTNLVP 133
K A NKK+ N+ P
Sbjct: 310 --------KETAKNKKKNENVDP 324
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
D + KRP + + ++ ++ KK+NP G KWK +S EK PYE K +
Sbjct: 137 DCAETKRPSTPYILWCKDNWNEVKKQNPEAD-FKETSNILGAKWKGISAEEKKPYEEKYQ 195
Query: 111 KLKSEY 116
K Y
Sbjct: 196 ADKEAY 201
>gi|388854657|emb|CCF51814.1| probable NHP6B-nonhistone chromosomal protein [Ustilago hordei]
Length = 99
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
KR K+KKDP PKRP SA+ F ++ R+ K +NP VG+ G +WK MS AEK
Sbjct: 16 KRTTKSKKDPAAPKRPLSAYMFFSQDQRERVKADNPEA-GFGDVGRLLGARWKEMSDAEK 74
Query: 103 APYESKAEK 111
PY A +
Sbjct: 75 KPYNDMANR 83
>gi|4507241|ref|NP_003137.1| FACT complex subunit SSRP1 [Homo sapiens]
gi|397512296|ref|XP_003826485.1| PREDICTED: FACT complex subunit SSRP1 [Pan paniscus]
gi|426368405|ref|XP_004051198.1| PREDICTED: FACT complex subunit SSRP1 [Gorilla gorilla gorilla]
gi|730840|sp|Q08945.1|SSRP1_HUMAN RecName: Full=FACT complex subunit SSRP1; AltName:
Full=Chromatin-specific transcription elongation factor
80 kDa subunit; AltName: Full=Facilitates chromatin
transcription complex 80 kDa subunit; Short=FACT 80 kDa
subunit; Short=FACTp80; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; Short=hSSRP1; AltName: Full=T160
gi|184242|gb|AAA58660.1| high mobility group box [Homo sapiens]
gi|13477285|gb|AAH05116.1| Structure specific recognition protein 1 [Homo sapiens]
gi|119594140|gb|EAW73734.1| structure specific recognition protein 1, isoform CRA_a [Homo
sapiens]
gi|119594141|gb|EAW73735.1| structure specific recognition protein 1, isoform CRA_a [Homo
sapiens]
gi|123993967|gb|ABM84585.1| structure specific recognition protein 1 [synthetic construct]
gi|123998313|gb|ABM86758.1| structure specific recognition protein 1 [synthetic construct]
gi|410226712|gb|JAA10575.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410226714|gb|JAA10576.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410262712|gb|JAA19322.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410262714|gb|JAA19323.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410305268|gb|JAA31234.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410305270|gb|JAA31235.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410351021|gb|JAA42114.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410351025|gb|JAA42116.1| structure specific recognition protein 1 [Pan troglodytes]
Length = 709
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + +Y K M Y
Sbjct: 596 WDRKAEDARRDYEKAMKEY 614
>gi|189230320|ref|NP_001121484.1| TOX high mobility group box family member 3 [Xenopus (Silurana)
tropicalis]
gi|183986342|gb|AAI66269.1| LOC100158584 protein [Xenopus (Silurana) tropicalis]
Length = 580
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ V+ E + +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 208 KSATPSPSSSVNDEDVDETNRTIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 263
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W + +K Y+ K E K EY K +
Sbjct: 264 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDGLGEEQKQVYKRKTEAAKKEYLKALA 322
Query: 122 AYNKKQV 128
AY V
Sbjct: 323 AYRASLV 329
>gi|332252411|ref|XP_003275348.1| PREDICTED: FACT complex subunit SSRP1 [Nomascus leucogenys]
Length = 709
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + +Y K M Y
Sbjct: 596 WDRKAEDARRDYEKAMKEY 614
>gi|410351023|gb|JAA42115.1| structure specific recognition protein 1 [Pan troglodytes]
Length = 712
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K
Sbjct: 540 EVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEE 598
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + +Y K M Y
Sbjct: 599 WDRKAEDARRDYEKAMKEY 617
>gi|392558113|gb|EIW51341.1| hypothetical protein TRAVEDRAFT_80819, partial [Trametes versicolor
FP-101664 SS1]
Length = 91
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 26 KRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA 85
+R+AAT K D K +GK KDP PKR SA+ F +++R+ K ENP+
Sbjct: 1 QRRAAT-KQDKAPKAKGK------KDPKAPKRALSAYMFFSQDWRERIKAENPDA-GFGE 52
Query: 86 VGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYN 124
+GK G KWK + EK PY +A KS ++ NAY+
Sbjct: 53 IGKLLGAKWKELDDDEKKPYLDQAAADKSRAEEEKNAYD 91
>gi|440894115|gb|ELR46659.1| TOX high mobility group box family member 3, partial [Bos grunniens
mutus]
Length = 543
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 180 KSATPSPSSSINEEDADETNRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 235
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 236 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 294
Query: 122 AYNKKQV 128
AY V
Sbjct: 295 AYRASLV 301
>gi|241122588|ref|XP_002403591.1| DNA-binding protein, putative [Ixodes scapularis]
gi|215493481|gb|EEC03122.1| DNA-binding protein, putative [Ixodes scapularis]
Length = 207
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+++K KDPN PKRP SAFF F + R ++E+P+ + V V K G +W + K+
Sbjct: 85 KKRKRTKDPNAPKRPLSAFFWFCNDERPNVRQESPDAS-VGEVAKELGRRWNDVGDDTKS 143
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQVTNLVP 133
YE A K K+ Y K++ AY K+ P
Sbjct: 144 KYEGLAAKDKARYEKELKAYKNKKTKGASP 173
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEK 111
+KP+ SA+ F++ R+ KK++P+ V A K +WK+MS EK + A+K
Sbjct: 5 DKPRGRMSAYAFFVQTCREEHKKKHPSENVVFAEFSKKCAERWKTMSEGEKKRFHQMADK 64
Query: 112 LKSEYGKKMNAY 123
K + +M Y
Sbjct: 65 DKKRFDSEMADY 76
>gi|226246533|ref|NP_001139660.1| TOX high mobility group box family member 3 isoform 2 [Homo
sapiens]
gi|194387658|dbj|BAG61242.1| unnamed protein product [Homo sapiens]
Length = 571
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 201 KSATPSPSSSINEEDADEANRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 256
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 257 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 315
Query: 122 AYNKKQV 128
AY V
Sbjct: 316 AYRASLV 322
>gi|389633953|ref|XP_003714629.1| hypothetical protein MGG_01641 [Magnaporthe oryzae 70-15]
gi|351646962|gb|EHA54822.1| hypothetical protein MGG_01641 [Magnaporthe oryzae 70-15]
gi|440474541|gb|ELQ43278.1| hypothetical protein OOU_Y34scaffold00162g47 [Magnaporthe oryzae
Y34]
gi|440479757|gb|ELQ60505.1| hypothetical protein OOW_P131scaffold01287g37 [Magnaporthe oryzae
P131]
Length = 537
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
+KR+ +R KA D N P+RPPSA+ +F + R K N T ++ K G W+++
Sbjct: 108 TKRKYRRHPKA--DENAPERPPSAYVLFSNKTRDDLKDRNLTFTEIA---KLVGENWQAL 162
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+PAEK PYE++A+ K +Y + Y +
Sbjct: 163 TPAEKEPYETQAQTAKEKYNADLAEYKQ 190
>gi|148668679|gb|EDL00993.1| mCG49874 [Mus musculus]
Length = 140
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN PKRPPSAFF+F E R K ++P ++ + K G W S +K PYE KA K
Sbjct: 41 PNAPKRPPSAFFLFCSENRPEIKIDHPGLS-IGDTSKKLGVMWSEQSAKDKQPYEQKAAK 99
Query: 112 LKSEYGKKMNAYNKK 126
K +Y K + A+ K
Sbjct: 100 PKEKYEKDIAAFRAK 114
>gi|74638955|sp|Q9UVL1.1|NHP6_CANAL RecName: Full=Non-histone chromosomal protein 6
gi|6273391|gb|AAF06350.1|AF196333_1 nonhistone protein 6 [Candida albicans]
gi|238881668|gb|EEQ45306.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 92
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKR SA+ F E R + ENP ++ VGK G KWK+++ +K PYE+KAE
Sbjct: 15 DPDAPKRSLSAYMFFANENRDIVRAENPGIS-FGQVGKLLGEKWKALNSEDKLPYENKAE 73
Query: 111 KLKSEYGKKMNAYNKK 126
K Y K+ Y KK
Sbjct: 74 ADKKRYEKEKAEYAKK 89
>gi|307191141|gb|EFN74839.1| High mobility group protein DSP1 [Camponotus floridanus]
Length = 305
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+++K KD N PKR SAFF F + R K NP V + K G KW P K+
Sbjct: 193 KKRKHIKDHNAPKRSLSAFFWFCNDERGKVKMLNPEY-GVGDIAKELGKKWSDADPETKS 251
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQVTNLVPFFNSVDA 140
YE+ AEK K+ Y ++M AY KK + P A
Sbjct: 252 KYEAMAEKDKARYEREMTAYKKKIQNDGAPMMGGAPA 288
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAV-SAVGKAAGGKWKSMSPAEKAPYESKAEK 111
+KP+ +A+ F++ R+ KK++P V K +WK+MS EK + AEK
Sbjct: 110 SKPRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDIEKKRFHEMAEK 169
Query: 112 LKSEYGKKMNAYN 124
K Y +M Y
Sbjct: 170 DKKRYDAEMQNYT 182
>gi|443710428|gb|ELU04681.1| hypothetical protein CAPTEDRAFT_155070 [Capitella teleta]
Length = 269
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R++K D N PK+P + + FL + R+ ++ENP+ T + + K G +W + P EK
Sbjct: 15 RKRKRVHDANAPKQPLTGYVRFLSDRREQIREENPSAT-FTEITKRLGAEWSKLPPMEKQ 73
Query: 104 PYESKAEKLKSEYGKKMNAYNKKQ 127
Y +AE+ K Y K++ AY++ +
Sbjct: 74 RYLDEAERDKERYLKELEAYHQTE 97
>gi|395747831|ref|XP_002826470.2| PREDICTED: TOX high mobility group box family member 3 [Pongo
abelii]
Length = 554
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 170 KSATPSPSSSINEEDADEANRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 225
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 226 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 284
Query: 122 AYNKKQV 128
AY V
Sbjct: 285 AYRASLV 291
>gi|393907169|gb|EJD74538.1| hypothetical protein LOAG_18151 [Loa loa]
Length = 317
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 30 ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKA 89
+T ++ + R+ R+K++KKDPN+P++P SA+ +F + + K +PN + V K
Sbjct: 85 STDQMTNRISRRTIRKKRSKKDPNEPQKPVSAYALFFRDTQAAIKGRSPNA-SFGEVSKI 143
Query: 90 AGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQVT 129
W ++ K Y+ + E K +Y KK+ AY +Q++
Sbjct: 144 VASMWDTLDCHAKNLYKQRTEIAKKDYLKKLAAYRAQQIS 183
>gi|241954210|ref|XP_002419826.1| high-mobility group non-histone chromosomal protein, putative
[Candida dubliniensis CD36]
gi|223643167|emb|CAX42041.1| high-mobility group non-histone chromosomal protein, putative
[Candida dubliniensis CD36]
Length = 92
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKR SA+ F E R + ENP ++ VGK G KWK+++ +K PYE+KAE
Sbjct: 15 DPDAPKRSLSAYMFFANENRDIVRAENPGIS-FGQVGKLLGEKWKALNSEDKLPYENKAE 73
Query: 111 KLKSEYGKKMNAYNKK 126
K Y K+ Y KK
Sbjct: 74 ADKKRYEKEKAEYAKK 89
>gi|426382171|ref|XP_004057690.1| PREDICTED: TOX high mobility group box family member 3 [Gorilla
gorilla gorilla]
Length = 576
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 206 KSATPSPSSSINEEDADEANRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 261
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 262 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 320
Query: 122 AYNKKQV 128
AY V
Sbjct: 321 AYRASLV 327
>gi|301097589|ref|XP_002897889.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106637|gb|EEY64689.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 210
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
KKDPN PKR SA+F F + R+ + ENPN ++ + KW+++ ++A Y+
Sbjct: 111 KKDPNAPKRALSAYFFFCNDIRQEVRDENPN-KKITEIATLLAEKWRALPDKKRAKYQKM 169
Query: 109 AEKLKSEYGKKMNAYN 124
E+ K +Y ++M+ YN
Sbjct: 170 NEEAKVKYQQQMDVYN 185
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
R+ + KKD N PKR SAF F + R T KKE P++ + + G +WK +S ++
Sbjct: 18 RKPRKKKDKNAPKRALSAFMFFSNDIRDTVKKEMPDLQFLE-ISSEIGRRWKQISDEDRR 76
Query: 104 PYESKAEKLKSEYGKKMNAY 123
PY+ A K Y ++ Y
Sbjct: 77 PYDELAAADKRRYQEEKEDY 96
>gi|114662470|ref|XP_001165206.1| PREDICTED: TOX high mobility group box family member 3 isoform 1
[Pan troglodytes]
Length = 577
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 206 KSATPSPSSSINEEDADEANRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 261
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 262 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 320
Query: 122 AYNKKQV 128
AY V
Sbjct: 321 AYRASLV 327
>gi|226054295|ref|NP_001073899.2| TOX high mobility group box family member 3 isoform 1 [Homo
sapiens]
gi|397498179|ref|XP_003819867.1| PREDICTED: TOX high mobility group box family member 3 [Pan
paniscus]
gi|146325793|sp|O15405.2|TOX3_HUMAN RecName: Full=TOX high mobility group box family member 3; AltName:
Full=CAG trinucleotide repeat-containing gene F9
protein; AltName: Full=Trinucleotide repeat-containing
gene 9 protein
gi|119603193|gb|EAW82787.1| hCG1639853 [Homo sapiens]
gi|208965628|dbj|BAG72828.1| TOX high mobility group box family member 3 [synthetic construct]
Length = 576
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 206 KSATPSPSSSINEEDADEANRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 261
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 262 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 320
Query: 122 AYNKKQV 128
AY V
Sbjct: 321 AYRASLV 327
>gi|297303892|ref|XP_002806292.1| PREDICTED: high mobility group-T protein-like [Macaca mulatta]
Length = 159
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PKRPP AFF+F E K E+P ++ VS V K G W + +K PYE KA
Sbjct: 55 KDPNAPKRPPLAFFMFSSEDCPKIK-EHPGLS-VSDVAKKLGEMWNYTAEDDKHPYEKKA 112
Query: 110 EKLKSEYGKKMNAY 123
KLK +Y K + A+
Sbjct: 113 VKLKEKYEKDIAAF 126
>gi|115396468|ref|XP_001213873.1| nonhistone chromosomal protein 6A [Aspergillus terreus NIH2624]
gi|114193442|gb|EAU35142.1| nonhistone chromosomal protein 6A [Aspergillus terreus NIH2624]
Length = 101
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+ F E R ++ENP +T VGK G KWK++S ++ PYE KA
Sbjct: 19 DPNAPKRGLSAYMFFANENRDKVREENPGIT-FGQVGKMLGEKWKALSEDDRRPYEEKAA 77
Query: 111 KLKSEYGKKMNAYN 124
K Y + +YN
Sbjct: 78 ADKKRYEDEKASYN 91
>gi|407404609|gb|EKF29994.1| high mobility group protein, putative [Trypanosoma cruzi
marinkellei]
Length = 361
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KD N PKR SA+F F +FRK ++P+++ V+ KAAG WK +S K PYE+ A
Sbjct: 291 KDENAPKRSMSAYFFFASDFRK----KHPDLS-VTETSKAAGAAWKELSDEMKKPYEAMA 345
Query: 110 EKLKSEYGKKMNA 122
+K K Y ++M A
Sbjct: 346 QKDKERYQREMAA 358
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R K KK KK + PK S + +F + R K++NP + + + G W S
Sbjct: 191 RNAKVSKKEKKPDDYPKAALSPYILFGNDHRDKVKEQNPEMKNTEILQR-LGKMWAEASD 249
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYNK 125
A K Y+ AE K + +++N Y K
Sbjct: 250 AVKEKYKKLAEDDKKRFDRELNEYKK 275
>gi|334311690|ref|XP_001371950.2| PREDICTED: TOX high mobility group box family member 3 [Monodelphis
domestica]
Length = 572
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 206 KSATPSPSSSINEEDADEANRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 261
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 262 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 320
Query: 122 AYNKKQV 128
AY V
Sbjct: 321 AYRASLV 327
>gi|195448286|ref|XP_002071591.1| GK25058 [Drosophila willistoni]
gi|194167676|gb|EDW82577.1| GK25058 [Drosophila willistoni]
Length = 406
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+++K KDPN PKR SAFF F + R K NP V + K G KW + P K
Sbjct: 268 KKRKQMKDPNAPKRSLSAFFWFCNDERNKVKALNPEY-GVGDIAKELGRKWSDVDPEVKQ 326
Query: 104 PYESKAEKLKSEYGKKMNAY 123
YES AE+ K+ Y ++M Y
Sbjct: 327 KYESMAERDKARYEREMTEY 346
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEKL 112
KP+ +A+ F++ R+ KK++P+ T + A + +WK+M EK + AEK
Sbjct: 186 KPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKD 245
Query: 113 KSEYGKKMNAY 123
K Y +M Y
Sbjct: 246 KQRYETEMQNY 256
>gi|393219482|gb|EJD04969.1| HMG-box [Fomitiporia mediterranea MF3/22]
Length = 114
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 8/80 (10%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY- 105
K KKDPN PKR SA+ F +++R+ K ENP+ VGK G KWK M +EK PY
Sbjct: 25 KGKKDPNAPKRALSAYMFFSQDWRERVKAENPDA-GFGEVGKLLGAKWKEMDESEKRPYI 83
Query: 106 ------ESKAEKLKSEYGKK 119
+++AE+ K+ Y KK
Sbjct: 84 EQAARDKARAEEEKANYEKK 103
>gi|551090|gb|AAA50238.1| DNA-binding protein [Drosophila melanogaster]
Length = 393
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 32 AKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
A D G KR K KDPN PKR SAFF F + R K NP V + K G
Sbjct: 254 ALWDRGKKR------KQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELG 306
Query: 92 GKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
KW + P K YES AE+ K+ Y ++M Y
Sbjct: 307 RKWSDVDPEVKQKYESMAERDKARYEREMTEY 338
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEKL 112
KP+ +A+ F++ R+ KK++P+ T + A + +WK+M EK + AEK
Sbjct: 178 KPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKD 237
Query: 113 KSEYGKKMNAY 123
K Y +M Y
Sbjct: 238 KQRYEAEMQNY 248
>gi|392352276|ref|XP_003751165.1| PREDICTED: high mobility group protein B1 [Rattus norvegicus]
Length = 187
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKKQVTNLVPF 134
E KA KLK +Y K + N P+
Sbjct: 145 EKKAAKLKEKYEKVRRMAGNLRYLNFFPY 173
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|351707228|gb|EHB10147.1| FACT complex subunit SSRP1 [Heterocephalus glaber]
Length = 709
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK M +K
Sbjct: 537 EAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMPKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDHKAEDARREYEKAMKEY 614
>gi|72051831|ref|XP_792040.1| PREDICTED: high mobility group protein 1 homolog
[Strongylocentrotus purpuratus]
gi|115767180|ref|XP_001176807.1| PREDICTED: high mobility group protein 1 homolog
[Strongylocentrotus purpuratus]
Length = 204
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
++AKKDP+ PKR SAFF+F + R K+E+ + + V + +A WK+++PA+KA Y
Sbjct: 89 RRAKKDPDAPKRNLSAFFLFSRDERGAIKQEHKDWS-VGKIAQALAAIWKTITPADKAKY 147
Query: 106 ESKAEKLKSEYGKKMNAY 123
+++A K Y ++M A+
Sbjct: 148 DAEAALEKQRYMREMAAF 165
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPNKP+ SA+ F+++ R++ + N TA S K +WK M +K P+
Sbjct: 3 KQKKDPNKPRGRMSAYAYFVQD-RRSKAEGQVNFTAFS---KECADRWKHMDDGDKRPFN 58
Query: 107 SKAEKLKSEYGKKMNAY 123
K+ K Y ++M+ Y
Sbjct: 59 DKSASDKIRYDREMSGY 75
>gi|355710193|gb|EHH31657.1| hypothetical protein EGK_12773 [Macaca mulatta]
Length = 541
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 170 KSATPSPSSSINEEDADEANRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 225
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 226 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 284
Query: 122 AYNKKQV 128
AY V
Sbjct: 285 AYRASLV 291
>gi|390463605|ref|XP_003733066.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 214
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y + AY K
Sbjct: 145 EKKAAKLKEKYEMDIAAYRAK 165
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|149726074|ref|XP_001503141.1| PREDICTED: high mobility group protein B1-like [Equus caballus]
Length = 215
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+ K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAY 123
E KA KLK +Y K + AY
Sbjct: 145 EKKAAKLKEKYEKDIAAY 162
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS E+ +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEEGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|431918516|gb|ELK17735.1| 182 kDa tankyrase-1-binding protein [Pteropus alecto]
Length = 2600
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
E K KDPN PKRP SA+ ++L R+ K ++P ++ ++ + K AG WK MS +K
Sbjct: 537 EVKKGKDPNAPKRPMSAYMLWLNASREKIKLDHPGIS-ITDLSKKAGEIWKGMSKEKKEE 595
Query: 105 YESKAEKLKSEYGKKMNAY 123
++ KAE + EY K M Y
Sbjct: 596 WDRKAEDARREYEKAMKEY 614
>gi|334351203|sp|B7SBD2.1|TOX3_RAT RecName: Full=TOX high mobility group box family member 3; AltName:
Full=Trinucleotide repeat-containing gene 9 protein
gi|161702899|gb|ABX76291.1| TOX high mobility group box family member 3 [Rattus norvegicus]
Length = 577
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R VG+++ A DSG K + +KK KKDPN+P++P SA
Sbjct: 205 KSATPSPSSSINEEDADETNRAVGEKRTAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 260
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 261 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 319
Query: 122 AYNKKQV 128
AY V
Sbjct: 320 AYRASLV 326
>gi|355756773|gb|EHH60381.1| hypothetical protein EGM_11729 [Macaca fascicularis]
Length = 543
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 170 KSATPSPSSSINEEDADEANRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 225
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 226 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 284
Query: 122 AYNKKQV 128
AY V
Sbjct: 285 AYRASLV 291
>gi|260166759|gb|ACX32991.1| RE09522p [Drosophila melanogaster]
Length = 411
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+GK+ K+ K DPN PKR SAFF F + R K NP V + K G KW + P
Sbjct: 276 RGKKRKQIK-DPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVDPE 333
Query: 101 EKAPYESKAEKLKSEYGKKMNAY 123
K YES AE+ K+ Y ++M Y
Sbjct: 334 VKQKYESMAERDKARYEREMTEY 356
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEKL 112
KP+ +A+ F++ R+ KK++P+ T + A + +WK+M EK + AEK
Sbjct: 196 KPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKD 255
Query: 113 KSEYGKKMNAY 123
K Y +M Y
Sbjct: 256 KQRYEAEMQNY 266
>gi|47228066|emb|CAF97695.1| unnamed protein product [Tetraodon nigroviridis]
Length = 662
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
G ++ + KKDPN+P++P SA+ +F + + K +NP+ + V K W S++ +
Sbjct: 266 GNKKARKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAS-FGEVSKIVASMWDSLAEEQ 324
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQVT 129
K Y+ K E K EY K + AY Q++
Sbjct: 325 KQVYKRKTEAAKKEYLKALAAYKANQLS 352
>gi|303289076|ref|XP_003063826.1| histone chaperone [Micromonas pusilla CCMP1545]
gi|226454894|gb|EEH52199.1| histone chaperone [Micromonas pusilla CCMP1545]
Length = 657
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYES 107
DPN PKRP S++ +F E R +E P ++ + +GKA G KWK M+ EK PYE
Sbjct: 553 DPNAPKRPLSSYMIFAGENRGKLVEETPGMS-IGEIGKALGAKWKEMTAEEKVPYED 608
>gi|23394916|gb|AAN31640.1|AF484963_1 high mobility group protein 1 [Biomphalaria glabrata]
Length = 215
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPNKPKRPP+A+F+FL ++R + N + + K AG +W+S+S +K PYE KA
Sbjct: 96 DPNKPKRPPTAYFLFLADYR--IRMANKGIEHKELL-KMAGEEWRSLSNEDKKPYEKKAL 152
Query: 111 KLKSEYGKKMNAYNK 125
+ +Y M Y K
Sbjct: 153 EESKKYESAMTEYRK 167
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 46/87 (52%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
GK KK KD NKPKR SA+F FL + RK K T ++ K A KWK++S +
Sbjct: 9 GKNSKKKVKDVNKPKRATSAYFFFLAQCRKEAAKAGKAPTKIAEFTKEASEKWKALSADK 68
Query: 102 KAPYESKAEKLKSEYGKKMNAYNKKQV 128
K P+E+ A K Y +M Y K V
Sbjct: 69 KKPFEAAAADDKRRYETEMAVYKGKSV 95
>gi|229368114|gb|ACQ59037.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 206
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E P T + V K G W + ++ P+
Sbjct: 85 KKKFKDPNAPKRPPSAFFIFCAEYRPKVKGETPGAT-IGDVAKRLGEMWNGTASEDRQPF 143
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K++ AY K
Sbjct: 144 EKKAAKLKEKYEKEVAAYRAK 164
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESK 108
K+ KPK S++ F++ R+ KK++P + S K +WK+MS EK +E
Sbjct: 3 KELGKPKGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSLKEKGKFEDL 62
Query: 109 AEKLKSEYGKKMNAY 123
A + K+ Y ++M +Y
Sbjct: 63 ARQDKARYEREMMSY 77
>gi|291415373|ref|XP_002723927.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G S +K PYE KA KL
Sbjct: 117 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMRSEHSAKDKQPYEQKAAKL 175
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 176 KEKYEKDIAAYRAK 189
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 27 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 86
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 87 MAKSEKARYDREMKNY 102
>gi|380025638|ref|XP_003696576.1| PREDICTED: high mobility group protein DSP1-like [Apis florea]
Length = 420
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
SK +GK+ K K D N PKR SAFF F + R K NP V + K G KW
Sbjct: 306 SKGRGKKRKHIK-DHNAPKRSLSAFFWFCNDERGKVKMLNPEF-GVGDIAKELGKKWSDA 363
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
P K+ YE+ AEK K+ Y ++M AY KK
Sbjct: 364 DPETKSKYEAMAEKDKARYEREMTAYKKK 392
>gi|332017611|gb|EGI58308.1| Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
subunit A [Acromyrmex echinatior]
Length = 1249
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 25 GKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVS 84
G +++ATA + + K+ KKA +D P++P S +F+FL + R+ + +NP++T +
Sbjct: 49 GVKRSATAT--GNTPNRTKKRKKAPRDATAPRQPLSGYFLFLNDRREKVRNQNPSLT-FT 105
Query: 85 AVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQVTNL 131
+ K +W + +K Y AE+ K Y ++ + Y + + L
Sbjct: 106 EITKLLAAEWSKLPIDQKQRYLDAAEQDKERYNREFSDYKQTEAYRL 152
>gi|74138677|dbj|BAE27155.1| unnamed protein product [Mus musculus]
Length = 215
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K ++P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGKHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|351712970|gb|EHB15889.1| FACT complex subunit SSRP1 [Heterocephalus glaber]
Length = 677
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 21 DRKVGKR--KAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENP 78
D K KR KA AK G K+ E K KDP+ P++P SA+ ++L R+ K E+P
Sbjct: 512 DEKEQKRLKKAKMAKDPKGHKKT--VEVKKGKDPSVPEQPLSAYVLWLNASREMIKSEHP 569
Query: 79 NVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
++ ++ + K AG WK MS K + KAE ++ EY K + Y +
Sbjct: 570 GIS-IANLSKKAGEIWKGMSKTMKEEWGHKAEDVRLEYEKAVKEYER 615
>gi|292610859|ref|XP_001921001.2| PREDICTED: TOX high mobility group box family member 4 [Danio
rerio]
Length = 685
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 19 PNDRKVGKRKA--ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKE 76
P R+VG + + A +D+G+ G ++ K KKDPN+P++P SA+ +F + + K +
Sbjct: 263 PVVRRVGGKPSMVPVATVDTGAS-LGVKKGKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ 321
Query: 77 NPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQVT 129
NPN T V K W S+ +K Y+ K E K +Y K + AY Q++
Sbjct: 322 NPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKDYLKALAAYRASQLS 373
>gi|40352857|gb|AAH64790.1| Hmgb1 protein [Mus musculus]
Length = 215
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPP AFF+F E+R K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 145 EKKAAKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|449282426|gb|EMC89259.1| TOX high mobility group box family member 3, partial [Columba
livia]
Length = 521
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E ++R G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 156 KSATPSPSSSINEEDADESNRATGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 211
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 212 YALFFRDTQAAIKGQNPNAT-FGDVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 270
Query: 122 AYNKKQV 128
AY V
Sbjct: 271 AYRASLV 277
>gi|443724197|gb|ELU12309.1| hypothetical protein CAPTEDRAFT_56147, partial [Capitella teleta]
Length = 196
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
+D N+PKRP SA+F++L FR K + P + +AAG WK ++ EKAPYE A
Sbjct: 94 RDKNRPKRPQSAYFLWLAGFRTRMKDKIP---VNKELLRAAGEHWKRLTEVEKAPYEQMA 150
Query: 110 EKLKSEYGKKMNAYN 124
E + +Y + M YN
Sbjct: 151 EGERRKYEEAMRQYN 165
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 24 VGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
+G+ K AT K G KR K KDPN+PKRP SA+F ++ R +K +T V
Sbjct: 1 LGRPKGATTK---GGKR------KKNKDPNRPKRPTSAYFFYVAHCRAECEKRGERITRV 51
Query: 84 SAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAY 123
+ K W+ M+P ++ +++KA K+ Y ++MN Y
Sbjct: 52 AQWTKEISQVWREMTPEDRKGFDAKAVVDKARYEEQMNRY 91
>gi|66358646|ref|XP_626501.1| high mobility group (HMG)-box [Cryptosporidium parvum Iowa II]
gi|67611890|ref|XP_667184.1| high mobility group box 1 [Cryptosporidium hominis TU502]
gi|46227787|gb|EAK88707.1| high mobility group (HMG)-box [Cryptosporidium parvum Iowa II]
gi|54658295|gb|EAL36956.1| high mobility group box 1 [Cryptosporidium hominis]
gi|323508511|dbj|BAJ77149.1| cgd2_3070 [Cryptosporidium parvum]
Length = 182
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 39 KRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
+++ KR +A +DPNKPKRP +A+ ++ E R+ ++ +PN A+ K W S+
Sbjct: 70 QQKSKRSIRAPEDPNKPKRPHTAYTLWCEHIRQKVRENDPN-RALQM--KDLAEMWNSLP 126
Query: 99 PAEKAPYESKAEKLKSEYGKKMNAY 123
EK P+E KA++ K +Y +M AY
Sbjct: 127 EQEKGPWERKAQEFKQKYLAEMAAY 151
>gi|170056683|ref|XP_001864141.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876428|gb|EDS39811.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 372
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+++KA KDPN PKR SAFF F E R K NP V + K G KW M K+
Sbjct: 221 KKRKAFKDPNAPKRSLSAFFWFCHEERNKVKALNPEY-GVGDIAKELGRKWSDMDAEVKS 279
Query: 104 PYESKAEKLKSEYGKKMNAY 123
YE AEK K+ Y +M Y
Sbjct: 280 RYEQMAEKDKARYEAEMTEY 299
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEK 111
NKP+ +A+ F++ R+ KK++P + A + +WK+M EK + AEK
Sbjct: 138 NKPRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHEMAEK 197
Query: 112 LKSEYGKKMNAY 123
K+ Y +M +Y
Sbjct: 198 DKARYELEMQSY 209
>gi|412986109|emb|CCO17309.1| nucleosome binding protein [Bathycoccus prasinos]
Length = 725
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAP 104
+KK KKDP+ PK SA+ F E+ R K+NPN+ A + + G +WK++S EK P
Sbjct: 557 QKKRKKDPSAPKGAKSAYICFCEKERANIAKDNPNL-AATEIMTELGKRWKALSDKEKKP 615
Query: 105 YESKAEKLKSEYGKKMNAY 123
YE +AE ++ + + M Y
Sbjct: 616 YEKQAETDRARFNEAMKNY 634
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 39 KRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
++QGKR KK DP+ PK SA+ +F R T KE TA V G W + S
Sbjct: 643 EKQGKRRKK---DPDAPKNAKSAYIIFCAAKRSTIPKE----TAPKDVMSKLGQMWSATS 695
Query: 99 PAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
A+K PYE + K K Y K+M Y +KQ
Sbjct: 696 VADKKPYEDLSRKDKVRYEKEMAKYKEKQ 724
>gi|395839552|ref|XP_003792652.1| PREDICTED: TOX high mobility group box family member 3 [Otolemur
garnettii]
Length = 782
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 419 KSATPSPSSSINEEDADEASRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 474
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 475 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 533
Query: 122 AYNKKQV 128
AY V
Sbjct: 534 AYRASLV 540
>gi|407850184|gb|EKG04681.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KD N PKR SA+F F+ +FRK ++P+++ V+ KAAG WK +S K PYE+ A
Sbjct: 200 KDENAPKRSMSAYFFFVGDFRK----KHPDLS-VTETSKAAGAAWKELSDEMKKPYEAMA 254
Query: 110 EKLKSEYGKKMNA 122
+K K Y ++M A
Sbjct: 255 QKDKERYQREMAA 267
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 26 KRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA 85
K+++A+A D +R K KK KK + PK S + +F + R K++NP V +
Sbjct: 89 KKRSASAAAD---ERNAKVSKKEKKPDDYPKAALSPYILFGNDHRDKVKEQNPGVKN-TE 144
Query: 86 VGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
+ ++ G W S A K Y+ AE K + ++++ Y K
Sbjct: 145 ILQSLGKMWAEASDAVKEKYKKLAEDDKKRFDRELSEYKK 184
>gi|54020668|ref|NP_112383.1| FACT complex subunit SSRP1 [Rattus norvegicus]
gi|83305804|sp|Q04931.2|SSRP1_RAT RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; AltName: Full=T160
gi|53734496|gb|AAH83588.1| Structure specific recognition protein 1 [Rattus norvegicus]
gi|149022436|gb|EDL79330.1| structure specific recognition protein 1, isoform CRA_a [Rattus
norvegicus]
gi|149022437|gb|EDL79331.1| structure specific recognition protein 1, isoform CRA_a [Rattus
norvegicus]
Length = 709
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRP SA+ ++L R+ K ++P + +++ + K AG WK MS +K ++ KAE
Sbjct: 543 DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEEWDRKAE 601
Query: 111 KLKSEYGKKMNAY 123
+ EY K M Y
Sbjct: 602 DARREYEKAMKEY 614
>gi|357513707|ref|XP_003627142.1| HMG1/2-like protein [Medicago truncatula]
gi|355521164|gb|AET01618.1| HMG1/2-like protein [Medicago truncatula]
Length = 248
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
GKREK KD N KR P+ FFVF++EFRKTFK+ N + V VGK G KW+
Sbjct: 195 GKREKV--KDSNAAKRSPTDFFVFMDEFRKTFKEANLDSKDVKRVGKEDGEKWR 246
>gi|213407940|ref|XP_002174741.1| predicted protein [Schizosaccharomyces japonicus yFS275]
gi|212002788|gb|EEB08448.1| predicted protein [Schizosaccharomyces japonicus yFS275]
Length = 134
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
K +KDPN PKR SAF F R+ K+ENP T +G G KWK+++ EK PY
Sbjct: 7 KTRRKDPNAPKRNMSAFMFFSMSNREKIKEENPEAT-FGQIGSLLGKKWKTLTAVEKEPY 65
Query: 106 ESKAEKLKSEY 116
E KA K K Y
Sbjct: 66 EEKARKDKERY 76
>gi|412992276|emb|CCO19989.1| nucleosome binding protein [Bathycoccus prasinos]
Length = 94
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR SA+F F+ + R K NP++ V+ VGK G W++MS +EK PY KA+
Sbjct: 20 DPNAPKRNLSAYFFFMNDQRAKVVKANPDMK-VTEVGKKLGELWRAMSDSEKVPYNKKAD 78
Query: 111 KLKSEYGKKMNAY 123
K Y K AY
Sbjct: 79 ADKVRYEKAKAAY 91
>gi|1083056|pir||B61611 nonhistone chromosomal protein HMG-2 - bovine (fragments)
Length = 186
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G W S +K PYE KA KL
Sbjct: 85 NAPKRPPSAFFLFSAEHRPKIKAEHPGLS-IGDTAKKLGEMWSQQSAKDKQPYEQKASKL 143
Query: 113 KSEYGK 118
K +Y K
Sbjct: 144 KEKYEK 149
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESK 108
K DPNKP+ S++ F++ R+ KK++P+ + + +WK+MS EK+ +E
Sbjct: 2 KGDPNKPRGKMSSYAFFVQTSREEHKKKHPDASVNFSE------RWKTMSAKEKSKFEDM 55
Query: 109 AEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 56 AKSDKARYDREMKNY 70
>gi|302814252|ref|XP_002988810.1| hypothetical protein SELMODRAFT_159743 [Selaginella moellendorffii]
gi|300143381|gb|EFJ10072.1| hypothetical protein SELMODRAFT_159743 [Selaginella moellendorffii]
Length = 647
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN PKR S F F R+ KK P ++ V K G +WK+MS EK P+ES+A
Sbjct: 561 PNAPKRALSGFMYFSLAERENLKKSTPGIS-FKDVAKTLGERWKAMSKDEKEPFESQARV 619
Query: 112 LKSEYGKKMNAYNK 125
K Y K+M YNK
Sbjct: 620 DKERYTKQMQGYNK 633
>gi|221329973|ref|NP_001138203.1| dorsal switch protein 1, isoform F [Drosophila melanogaster]
gi|220901792|gb|ACL82935.1| dorsal switch protein 1, isoform F [Drosophila melanogaster]
Length = 397
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+GK+ K+ K DPN PKR SAFF F + R K NP V + K G KW + P
Sbjct: 262 RGKKRKQIK-DPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVDPE 319
Query: 101 EKAPYESKAEKLKSEYGKKMNAY 123
K YES AE+ K+ Y ++M Y
Sbjct: 320 VKQKYESMAERDKARYEREMTEY 342
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEKL 112
KP+ +A+ F++ R+ KK++P+ T + A + +WK+M EK + AEK
Sbjct: 182 KPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKD 241
Query: 113 KSEYGKKMNAY 123
K Y +M Y
Sbjct: 242 KQRYEAEMQNY 252
>gi|148701877|gb|EDL33824.1| mCG140646 [Mus musculus]
Length = 207
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+ K E+P + V V K G W + + +K PY
Sbjct: 87 KKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL-CVGDVAKKLGELWNNTAGDDKQPY 145
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 146 EKKAAKLKEKYEKDIAAYRAK 166
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKCED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|401838192|gb|EJT41931.1| ABF2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 185
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKS 114
PKRP SA+F+FL++ R F KENP + S + K AG KW+++ K Y S+ ++L S
Sbjct: 45 PKRPTSAYFLFLQDHRSQFAKENPTLRP-SEISKIAGEKWQTLKSDIKDKYISQRKELYS 103
Query: 115 EYGK 118
EY K
Sbjct: 104 EYQK 107
>gi|195040353|ref|XP_001991052.1| GH12282 [Drosophila grimshawi]
gi|193900810|gb|EDV99676.1| GH12282 [Drosophila grimshawi]
Length = 402
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KDPN PKR SAFF F + R K NP V + K G KW + P K Y
Sbjct: 268 RKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVDPEVKQKY 326
Query: 106 ESKAEKLKSEYGKKMNAY 123
ES AE+ K+ Y ++M Y
Sbjct: 327 ESMAERDKARYEREMTEY 344
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEKL 112
KP+ +A+ F++ R+ KK++P+ T + A + +WK+M EK + AEK
Sbjct: 184 KPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKD 243
Query: 113 KSEYGKKMNAY 123
K Y ++M Y
Sbjct: 244 KQRYEQEMQNY 254
>gi|157820243|ref|NP_001099641.1| TOX high mobility group box family member 3 [Rattus norvegicus]
gi|149032667|gb|EDL87537.1| trinucleotide repeat containing 9 (predicted) [Rattus norvegicus]
Length = 543
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R VG+++ A DSG K + +KK KKDPN+P++P SA
Sbjct: 169 KSATPSPSSSINEEDADETNRAVGEKRTAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 224
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 225 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 283
Query: 122 AYNKKQV 128
AY V
Sbjct: 284 AYRASLV 290
>gi|302762326|ref|XP_002964585.1| hypothetical protein SELMODRAFT_166865 [Selaginella moellendorffii]
gi|300168314|gb|EFJ34918.1| hypothetical protein SELMODRAFT_166865 [Selaginella moellendorffii]
Length = 647
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN PKR S F F R+ KK P ++ V K G +WK+MS EK P+ES+A
Sbjct: 561 PNAPKRALSGFMYFSLAERENLKKSTPGIS-FKDVAKTLGERWKAMSKDEKEPFESQARV 619
Query: 112 LKSEYGKKMNAYNK 125
K Y K+M YNK
Sbjct: 620 DKERYTKQMQGYNK 633
>gi|444727982|gb|ELW68448.1| High mobility group protein B1 [Tupaia chinensis]
Length = 165
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKRPPSAF +F E+R K E+P ++ + V K G W + + +K PYE KA
Sbjct: 79 DPNAPKRPPSAFSLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPYEKKAA 137
Query: 111 KL 112
KL
Sbjct: 138 KL 139
>gi|365759088|gb|EHN00901.1| Abf2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 185
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 55 PKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKS 114
PKRP SA+F+FL++ R F KENP + S + K AG KW+++ K Y S+ ++L S
Sbjct: 45 PKRPTSAYFLFLQDHRSQFAKENPTLRP-SEISKIAGEKWQTLKSDIKDKYISQRKELYS 103
Query: 115 EYGK 118
EY K
Sbjct: 104 EYQK 107
>gi|334314632|ref|XP_001379535.2| PREDICTED: TOX high mobility group box family member 4-like
[Monodelphis domestica]
Length = 731
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+P++P SA+ +F + + K +NPN T V K W S+ +K Y+ K E
Sbjct: 322 DPNEPQKPVSAYALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTE 380
Query: 111 KLKSEYGKKMNAYNKKQV 128
K EY K + AY QV
Sbjct: 381 AAKKEYLKALAAYKANQV 398
>gi|332227697|ref|XP_003263029.1| PREDICTED: TOX high mobility group box family member 3 [Nomascus
leucogenys]
Length = 483
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 11 RVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFR 70
+V L N R +G+++AA DSG K + +KK KKDPN+P++P SA+ +F + +
Sbjct: 123 QVLDRCLVLNKRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSAYALFFRDTQ 178
Query: 71 KTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQV 128
K +NPN T V K W S+ +K Y+ K E K EY K + AY V
Sbjct: 179 AAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRASLV 235
>gi|291414887|ref|XP_002723687.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 209
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAFF+F E R K E+P ++ + K G S +K PYE KA KL
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLS-IGDTAKKLGEMRSEHSAKDKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAYNKK 126
K +Y K + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DPNKP+ S++ F++ R+ KK++P+ + + K +WK+MS EK+ +E
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|395857418|ref|XP_003801091.1| PREDICTED: high mobility group protein B1-like [Otolemur garnettii]
Length = 197
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
R+G+ +KK K DPN PKRP SAFF+F E+ K E+P ++ + V K G W + +
Sbjct: 123 RKGETKKKFK-DPNAPKRPLSAFFLFCSEYCPKSKGEHPGLS-IGEVAKKLGVMWNNTAA 180
Query: 100 AEKAPYESKAEKLK 113
+K PYE KA KLK
Sbjct: 181 DDKQPYEKKAAKLK 194
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV-SAVGKAAGGKWKSMSPA 100
GK K K DP K + S+ F++ + KK++P + S K +WK+MS
Sbjct: 38 GKITKHGKGDPKKLRGKMSSCAFFVQTSWEEHKKKHPGASVTFSEFSKKCSERWKTMSGK 97
Query: 101 EKAPYESKAEKLKSEYGKKMNAY 123
E+ +E A+ K+ Y ++M Y
Sbjct: 98 ERGKFEDMAKADKAPYEREMKTY 120
>gi|320168039|gb|EFW44938.1| hypothetical protein CAOG_02944 [Capsaspora owczarzaki ATCC 30864]
Length = 193
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 42 GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAE 101
G + K KDPN PKRPPSA+ F R +K P+ T + A+ G W+ ++
Sbjct: 89 GGKSGKKSKDPNAPKRPPSAYICFANAVRPELRKTYPSDT-MPAISTKIGELWRQLTDDN 147
Query: 102 KAPYESKAEKLKSEYGKKMNAY 123
K PY +AE LK ++ +M AY
Sbjct: 148 KEPYNKQAEALKLKFQTEMAAY 169
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK +KDPNKPK+P +AF F R+ K +NP + ++ + G W + A+K Y
Sbjct: 6 KKDEKDPNKPKKPTTAFMYFSNAMRERVKTQNPGLK-MTDIASVLGKLWGQLPEADKDKY 64
Query: 106 ESKAEKLKSEYGKKMNAY 123
++ A K Y K M+ Y
Sbjct: 65 QTMANSDKERYAKAMDGY 82
>gi|403292578|ref|XP_003937316.1| PREDICTED: TOX high mobility group box family member 3 [Saimiri
boliviensis boliviensis]
Length = 551
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 170 KSATPSPSSSINEEDADEASRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 225
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 226 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 284
Query: 122 AYNKKQV 128
AY V
Sbjct: 285 AYRASLV 291
>gi|195393910|ref|XP_002055595.1| GJ19445 [Drosophila virilis]
gi|194150105|gb|EDW65796.1| GJ19445 [Drosophila virilis]
Length = 403
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+GK+ K+ K DPN PKR SAFF F + R K NP V + K G KW + P
Sbjct: 265 RGKKRKQIK-DPNAPKRSLSAFFWFCNDERNKVKALNPEY-GVGDIAKELGRKWSDVDPE 322
Query: 101 EKAPYESKAEKLKSEYGKKMNAY 123
K YES AE+ K+ Y ++M Y
Sbjct: 323 VKQKYESMAERDKARYEREMTEY 345
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEKL 112
KP+ +A+ F++ R+ KK++P+ T + A + +WK+M EK + AEK
Sbjct: 185 KPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKD 244
Query: 113 KSEYGKKMNAY 123
K Y +M Y
Sbjct: 245 KQRYETEMQNY 255
>gi|194770156|ref|XP_001967163.1| GF19115 [Drosophila ananassae]
gi|190619283|gb|EDV34807.1| GF19115 [Drosophila ananassae]
Length = 387
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+++K KDPN PKR SAFF F + R K NP V + K G KW + P K
Sbjct: 254 KKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVDPEVKQ 312
Query: 104 PYESKAEKLKSEYGKKMNAY 123
YES AE+ K+ Y ++M Y
Sbjct: 313 KYESMAERDKARYEREMTEY 332
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEKL 112
KP+ +A+ F++ R+ KK++P+ T + A + +WK+M EK + AEK
Sbjct: 172 KPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKD 231
Query: 113 KSEYGKKMNAY 123
K Y +M Y
Sbjct: 232 KQRYEAEMQNY 242
>gi|444728198|gb|ELW68662.1| High mobility group protein B1 [Tupaia chinensis]
Length = 132
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+R K E+P ++ V K G W + + +K PY
Sbjct: 12 KKKFKDPNAPKRPPSAFFLFCSEYRSKIKGEHPGLSN-GDVAKKLGEIWNNTAADDKQPY 70
Query: 106 ESKAEKLKSEYGKKMNAYNKK 126
E KA KLK +Y K + AY K
Sbjct: 71 EKKAAKLKEKYEKDIAAYRAK 91
>gi|79151969|gb|AAI08004.1| LOC559853 protein, partial [Danio rerio]
Length = 683
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 19 PNDRKVGKRKA--ATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKE 76
P R+VG + + A +D+G+ G ++ K KKDPN+P++P SA+ +F + + K +
Sbjct: 261 PVVRRVGGKPSMVPVATVDTGASL-GVKKGKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ 319
Query: 77 NPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNKKQVT 129
NPN T V K W S+ +K Y+ K E K +Y K + AY Q++
Sbjct: 320 NPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKDYLKALAAYRASQLS 371
>gi|296231075|ref|XP_002760991.1| PREDICTED: TOX high mobility group box family member 3 [Callithrix
jacchus]
Length = 552
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 170 KSATPSPSSSINEEDADEASRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 225
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 226 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 284
Query: 122 AYNKKQV 128
AY V
Sbjct: 285 AYRASLV 291
>gi|45551469|ref|NP_727959.2| dorsal switch protein 1, isoform D [Drosophila melanogaster]
gi|45447020|gb|AAN09394.2| dorsal switch protein 1, isoform D [Drosophila melanogaster]
gi|327180774|gb|AEA30996.1| RE44118p [Drosophila melanogaster]
Length = 386
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KDPN PKR SAFF F + R K NP V + K G KW + P K Y
Sbjct: 255 RKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVDPEVKQKY 313
Query: 106 ESKAEKLKSEYGKKMNAY 123
ES AE+ K+ Y ++M Y
Sbjct: 314 ESMAERDKARYEREMTEY 331
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEKL 112
KP+ +A+ F++ R+ KK++P+ T + A + +WK+M EK + AEK
Sbjct: 171 KPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKD 230
Query: 113 KSEYGKKMNAY 123
K Y +M Y
Sbjct: 231 KQRYEAEMQNY 241
>gi|24642472|ref|NP_727960.1| dorsal switch protein 1, isoform A [Drosophila melanogaster]
gi|24642474|ref|NP_727961.1| dorsal switch protein 1, isoform B [Drosophila melanogaster]
gi|24642476|ref|NP_542446.2| dorsal switch protein 1, isoform C [Drosophila melanogaster]
gi|16768340|gb|AAL28389.1| GM02110p [Drosophila melanogaster]
gi|22832356|gb|AAN09395.1| dorsal switch protein 1, isoform A [Drosophila melanogaster]
gi|22832357|gb|AAN09396.1| dorsal switch protein 1, isoform B [Drosophila melanogaster]
gi|22832358|gb|AAF48594.2| dorsal switch protein 1, isoform C [Drosophila melanogaster]
gi|220943192|gb|ACL84139.1| Dsp1-PA [synthetic construct]
gi|220953466|gb|ACL89276.1| Dsp1-PA [synthetic construct]
Length = 385
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KDPN PKR SAFF F + R K NP V + K G KW + P K Y
Sbjct: 254 RKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVDPEVKQKY 312
Query: 106 ESKAEKLKSEYGKKMNAY 123
ES AE+ K+ Y ++M Y
Sbjct: 313 ESMAERDKARYEREMTEY 330
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEKL 112
KP+ +A+ F++ R+ KK++P+ T + A + +WK+M EK + AEK
Sbjct: 170 KPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKD 229
Query: 113 KSEYGKKMNAY 123
K Y +M Y
Sbjct: 230 KQRYEAEMQNY 240
>gi|347830295|emb|CCD45992.1| similar to transcription factor HMG [Botryotinia fuckeliana]
Length = 542
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 37 GSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
G+KR+ +R K D + P+RPPSA+ +F + R+ K + T ++ K G W++
Sbjct: 100 GAKRKYRRHPKP--DESAPERPPSAYVIFSNKMREDLKGRALSFTEIA---KLVGENWQN 154
Query: 97 MSPAEKAPYESKAEKLKSEYGKKMNAYNKKQ 127
+SP+EK PYE +A K Y ++ Y K Q
Sbjct: 155 LSPSEKEPYEHQAYTAKERYNNELAEYKKTQ 185
>gi|355757371|gb|EHH60896.1| hypothetical protein EGM_18788, partial [Macaca fascicularis]
Length = 189
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PKRPP AFF+F E K E+P ++ VS V K G W + +K PYE KA
Sbjct: 86 KDPNAPKRPPLAFFMFSSEDCPKIK-EHPGLS-VSDVAKKLGEMWNYTAEDDKHPYEKKA 143
Query: 110 EKLKSEYGKKMNAY 123
KLK +Y K + A+
Sbjct: 144 VKLKEKYEKDIAAF 157
>gi|198469582|ref|XP_001355062.2| GA11488 [Drosophila pseudoobscura pseudoobscura]
gi|198146939|gb|EAL32118.2| GA11488 [Drosophila pseudoobscura pseudoobscura]
Length = 393
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+++K KDPN PKR SAFF F + R K NP V + K G KW + P K
Sbjct: 259 KKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEY-GVGDIAKELGRKWSDVDPEVKQ 317
Query: 104 PYESKAEKLKSEYGKKMNAY 123
YES AE+ K+ Y ++M Y
Sbjct: 318 KYESMAERDKARYEREMTEY 337
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEKL 112
KP+ +A+ F++ R+ KK++P+ T + A + +WK+M EK + AEK
Sbjct: 177 KPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKD 236
Query: 113 KSEYGKKMNAY 123
K Y +M Y
Sbjct: 237 KQRYEAEMQNY 247
>gi|299741148|ref|XP_001834261.2| non-histone chromosomal protein 6 [Coprinopsis cinerea
okayama7#130]
gi|298404577|gb|EAU87573.2| non-histone chromosomal protein 6 [Coprinopsis cinerea
okayama7#130]
Length = 184
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K+KKDP KPKR SA+ F +++R+ K ENP+ VGK G KWK + EK PY
Sbjct: 88 KSKKDPLKPKRALSAYMFFSQDWRERIKAENPDA-GFGEVGKLLGAKWKELDEEEKKPYI 146
Query: 107 SKAEKLKSEYGKKMNAYNK 125
A K K + +AY+K
Sbjct: 147 ELANKDKERAENEKSAYDK 165
>gi|444725503|gb|ELW66067.1| Trem-like transcript 1 protein [Tupaia chinensis]
Length = 668
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN PKR PS FF+F EFR K NP ++ + V K G W ++S +EK PY +
Sbjct: 586 DPNAPKRRPSVFFLFCSEFRLKIKSTNPGIS-IGDVAKKLGEMWNNLSDSEKQPYITNGA 644
Query: 111 K 111
K
Sbjct: 645 K 645
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 60 SAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGK 118
SA+ F++ R+ KK+NP V + K +WK+MS EK+ ++ A+ K Y +
Sbjct: 511 SAYTFFVQTCREKHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDR 570
Query: 119 KMNAY 123
+M Y
Sbjct: 571 EMKDY 575
>gi|258563818|ref|XP_002582654.1| nonhistone chromosomal protein 6A [Uncinocarpus reesii 1704]
gi|237908161|gb|EEP82562.1| nonhistone chromosomal protein 6A [Uncinocarpus reesii 1704]
Length = 115
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 52 PNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEK 111
PN PKR SA+ F E R+ ++ENP ++ VGK G +WK++S ++APYE KA
Sbjct: 22 PNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKLLGERWKALSDKQRAPYEEKAAA 80
Query: 112 LKSEYGKKMNAYNK 125
K Y + +YN+
Sbjct: 81 DKKRYEDEKASYNQ 94
>gi|444726214|gb|ELW66754.1| High mobility group protein B1 [Tupaia chinensis]
Length = 160
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+G+ EKK K DPN PKRPPSAF +F E+R K E+P + + V K G W + +
Sbjct: 31 KGETEKKVK-DPNAPKRPPSAFLLFCSEYRPKIKGEHPGLF-IGDVAKKLGEMWNNTAAG 88
Query: 101 EKAPYESKAEKLKSEYGKKMNAYNKK 126
K PYE KA KLK +Y K + AY K
Sbjct: 89 GKQPYEKKAAKLKEKYEKDIAAYRAK 114
>gi|383858172|ref|XP_003704576.1| PREDICTED: high mobility group protein DSP1-like [Megachile
rotundata]
Length = 433
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 38 SKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSM 97
SK +GK+ +K KD N PKR SAFF F + R K NP V + K G KW
Sbjct: 319 SKGRGKK-RKHIKDLNAPKRSLSAFFWFCSDERGKVKMLNPEF-GVGDIAKELGKKWSDA 376
Query: 98 SPAEKAPYESKAEKLKSEYGKKMNAYNKK 126
P K+ YE+ AEK K+ Y ++M AY KK
Sbjct: 377 DPETKSKYEAMAEKDKARYEREMTAYKKK 405
>gi|283462216|gb|ADB22402.1| dorsal switch-like hmg protein [Saccoglossus kowalevskii]
Length = 241
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DP+ PKR S FF+F R KK +PN V V KA G +WK++S A+KA YE +A
Sbjct: 121 DPDAPKRNLSPFFLFCNVKRAEVKKVHPN-WGVGDVAKALGEQWKNVSAADKAKYEKEAA 179
Query: 111 KLKSEYGKKMNAY 123
K K Y K M AY
Sbjct: 180 KEKIRYEKDMEAY 192
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K +P+KPK SA+ F++ R+ KK++P + V A K +WK M+ EK +
Sbjct: 30 KGNPDKPKGRMSAYAFFVQSCRQEHKKQHPAESVVFAEFSKKCAERWKKMTDKEKKVFHD 89
Query: 108 KAEKLKSEYGKKMNAYN 124
A+K K Y +M Y
Sbjct: 90 MADKDKERYNTEMEKYT 106
>gi|195479189|ref|XP_002100798.1| GE17263 [Drosophila yakuba]
gi|194188322|gb|EDX01906.1| GE17263 [Drosophila yakuba]
Length = 394
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KDPN PKR SAFF F + R K NP V + K G KW + P K Y
Sbjct: 263 RKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVDPEVKQKY 321
Query: 106 ESKAEKLKSEYGKKMNAY 123
ES AE+ K+ Y ++M Y
Sbjct: 322 ESMAERDKARYEREMTEY 339
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEKL 112
KP+ +A+ F++ R+ KK++P+ T + A + +WK+M EK + AEK
Sbjct: 179 KPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKD 238
Query: 113 KSEYGKKMNAY 123
K Y +M Y
Sbjct: 239 KQRYEAEMQNY 249
>gi|431914121|gb|ELK15380.1| TOX high mobility group box family member 3 [Pteropus alecto]
Length = 570
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E R +G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 300 KSATPSPSSSINEEDADEASRAIGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 355
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 356 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 414
Query: 122 AYNKKQV 128
AY V
Sbjct: 415 AYRASLV 421
>gi|409043132|gb|EKM52615.1| hypothetical protein PHACADRAFT_164552 [Phanerochaete carnosa
HHB-10118-sp]
Length = 115
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KKD N PKR SA+ F +++R+ K ENP+ + +GK G KWK + EK PY
Sbjct: 21 RKTKKDKNAPKRALSAYMFFSQDWRERVKAENPDAS-FGELGKLLGTKWKELDEEEKKPY 79
Query: 106 ESKAEKLKSEYGKKMNAYNKKQV 128
+AE+ K+ ++ Y+ K+V
Sbjct: 80 IEQAERDKARAEREKKDYDNKKV 102
>gi|194893856|ref|XP_001977954.1| GG17955 [Drosophila erecta]
gi|195567092|ref|XP_002107106.1| GD17278 [Drosophila simulans]
gi|190649603|gb|EDV46881.1| GG17955 [Drosophila erecta]
gi|194204505|gb|EDX18081.1| GD17278 [Drosophila simulans]
Length = 393
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KDPN PKR SAFF F + R K NP V + K G KW + P K Y
Sbjct: 262 RKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVDPEVKQKY 320
Query: 106 ESKAEKLKSEYGKKMNAY 123
ES AE+ K+ Y ++M Y
Sbjct: 321 ESMAERDKARYEREMTEY 338
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEKL 112
KP+ +A+ F++ R+ KK++P+ T + A + +WK+M EK + AEK
Sbjct: 178 KPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKD 237
Query: 113 KSEYGKKMNAY 123
K Y +M Y
Sbjct: 238 KQRYEAEMQNY 248
>gi|45555716|ref|NP_996485.1| dorsal switch protein 1, isoform E [Drosophila melanogaster]
gi|17366497|sp|Q24537.1|HMG2_DROME RecName: Full=High mobility group protein DSP1; AltName:
Full=Protein dorsal switch 1
gi|1150375|emb|CAA61938.1| ssrp2 [Drosophila melanogaster]
gi|45447019|gb|AAS65386.1| dorsal switch protein 1, isoform E [Drosophila melanogaster]
Length = 393
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+GK+ K+ K DPN PKR SAFF F + R K NP V + K G KW + P
Sbjct: 258 RGKKRKQIK-DPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVDPE 315
Query: 101 EKAPYESKAEKLKSEYGKKMNAY 123
K YES AE+ K+ Y ++M Y
Sbjct: 316 VKQKYESMAERDKARYEREMTEY 338
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEKL 112
KP+ +A+ F++ R+ KK++P+ T + A + +WK+M EK + AEK
Sbjct: 178 KPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKD 237
Query: 113 KSEYGKKMNAY 123
K Y +M Y
Sbjct: 238 KQRYEAEMQNY 248
>gi|302414302|ref|XP_003004983.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261356052|gb|EEY18480.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 220
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K + K D N P+RPPSA+ +F + R K N T ++ K G W+S+SP EK
Sbjct: 104 KYRRHPKPDENAPERPPSAYVLFSNKMRDDLKGRNLTFTEIA---KLVGENWQSLSPVEK 160
Query: 103 APYESKAEKLKSEYGKKM 120
P+E++A K +Y + +
Sbjct: 161 EPFETQALNAKEKYNQDL 178
>gi|440799045|gb|ELR20106.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 143
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 40 RQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
++GK+EK DPN PKR +A+ +F E R K +NP + + K KWK++S
Sbjct: 42 KKGKKEK----DPNAPKRAKTAYIIFATEERPRAKADNPEL-GFGDLTKCVSDKWKALSD 96
Query: 100 AEKAPYESKAEKLKSEYGKKMNAYNK 125
EKAPY KA + K Y +++ YNK
Sbjct: 97 DEKAPYLEKAAQDKERYADEVSKYNK 122
>gi|195134440|ref|XP_002011645.1| GI10980 [Drosophila mojavensis]
gi|193906768|gb|EDW05635.1| GI10980 [Drosophila mojavensis]
Length = 402
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+++K KDPN PKR SAFF F + R K NP V + K G KW + P K
Sbjct: 264 KKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEY-GVGDIAKELGRKWSDVDPEVKQ 322
Query: 104 PYESKAEKLKSEYGKKMNAY 123
YES AE+ K+ Y ++M Y
Sbjct: 323 KYESMAERDKARYEREMTEY 342
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEKL 112
KP+ +A+ F++ R+ KK++P+ T + A + +WK+M EK + AEK
Sbjct: 182 KPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKD 241
Query: 113 KSEYGKKMNAY 123
K Y ++M Y
Sbjct: 242 KQRYEQEMQNY 252
>gi|51339|emb|CAA47900.1| high mobility group 2 protein [Mus musculus]
Length = 205
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 53 NKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKL 112
N PKRPPSAF +F E R K E P ++ + K G W S EK PYE KA KL
Sbjct: 93 NAPKRPPSAFCLFCSENRPKIKIEYPGLS-IGDTAKKLGEMWSEQSAKEKQPYEQKAAKL 151
Query: 113 KSEYGKKMNAY 123
K +Y K AY
Sbjct: 152 KEKYEKDFAAY 162
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K DP KP S++ F++ R+ KK++PN + + + K +WK+MS E + +E
Sbjct: 3 KGDPIKPLGKMSSYAFFVQTCREEHKKKHPNSSVNFAEISKKCSKRWKTMSAKENSKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K+ Y ++M Y
Sbjct: 63 LAKSDKACYYREMKNY 78
>gi|395503000|ref|XP_003755861.1| PREDICTED: TOX high mobility group box family member 4 [Sarcophilus
harrisii]
Length = 626
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+P++P SA+ +F + + K +NPN T V K W S+ +K Y+ K E
Sbjct: 218 DPNEPQKPVSAYALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTE 276
Query: 111 KLKSEYGKKMNAYNKKQV 128
K EY K + AY QV
Sbjct: 277 AAKKEYLKALAAYKANQV 294
>gi|297302803|ref|XP_001082943.2| PREDICTED: high mobility group protein B1-like [Macaca mulatta]
Length = 169
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PKRPPS+FF+F E+R K E+P + V K G W + + +K PYE KA
Sbjct: 50 KDPNVPKRPPSSFFLFCSEYRPKTKGEHPGL-PFDDVAKNLGETWNNTAAGDKQPYEKKA 108
Query: 110 EKLKSEYGKKMNAYNKK 126
KLK++Y + AY K
Sbjct: 109 AKLKAKYERDTAAYRAK 125
>gi|449269673|gb|EMC80424.1| High mobility group protein B1 [Columba livia]
Length = 209
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F EFR K E+P ++ + V K G W + + +K PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQPY 144
Query: 106 ESKAEKLKSEYGK 118
E KA KLK +Y K
Sbjct: 145 EKKAAKLKEKYEK 157
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K DP KP+ S++ F++ R+ KK++P+ + S K +WK+MS EK +E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y K+M Y
Sbjct: 62 DMAKADKLRYEKEMKNY 78
>gi|413943061|gb|AFW75710.1| hypothetical protein ZEAMMB73_996127 [Zea mays]
Length = 95
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
R+ KA KDPNKPKR P+AFFV + EFRK FK++NP + +V+AV G WKS
Sbjct: 35 RKAKAGKDPNKPKRAPNAFFVLMGEFRKEFKEKNPKIKSVAAVELNFPG-WKS 86
>gi|392876622|gb|AFM87143.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S+ K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDSSEFSKQCSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|26353080|dbj|BAC40170.1| unnamed protein product [Mus musculus]
Length = 619
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+P++P SA+ +F + + K++NPN T V K W S+ +K Y+ K E
Sbjct: 219 DPNEPQKPVSAYALFFRDTQAAIKRQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTE 277
Query: 111 KLKSEYGKKMNAYNKKQ 127
K EY K + AY Q
Sbjct: 278 AAKKEYLKALAAYKDNQ 294
>gi|587104|emb|CAA57212.1| unnamed protein product [Drosophila melanogaster]
Length = 328
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 41 QGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
+GK+ K+ K DPN PKR SAFF F + R K NP V + K G KW + P
Sbjct: 193 RGKKRKQIK-DPNAPKRSLSAFFWFCNDERNKVKALNPEF-GVGDIAKELGRKWSDVDPE 250
Query: 101 EKAPYESKAEKLKSEYGKKMNAY 123
K YES AE+ K+ Y ++M Y
Sbjct: 251 VKQKYESMAERDKARYEREMTEY 273
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTAVSA-VGKAAGGKWKSMSPAEKAPYESKAEKL 112
KP+ +A+ F++ R+ KK++P+ T + A + +WK+M EK + AEK
Sbjct: 113 KPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKD 172
Query: 113 KSEYGKKMNAY 123
K Y +M Y
Sbjct: 173 KQRYEAEMQNY 183
>gi|354471653|ref|XP_003498055.1| PREDICTED: TOX high mobility group box family member 3-like
[Cricetulus griseus]
Length = 544
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E +R +G+++ A DSG K + +KK KKDPN+P++P SA
Sbjct: 170 KSATPSPSSSINEEDTDEANRAIGEKRTAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 225
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 226 YALFFRDTQAAIKGQNPNAT-FGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 284
Query: 122 AYNKKQV 128
AY V
Sbjct: 285 AYRASLV 291
>gi|255087726|ref|XP_002505786.1| histone chaperone [Micromonas sp. RCC299]
gi|226521056|gb|ACO67044.1| histone chaperone [Micromonas sp. RCC299]
Length = 643
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAE 110
DPN+PKRP SAF +F +E R ++NP+ A+ VGK G +W+ + P K +E+KA
Sbjct: 547 DPNEPKRPLSAFMIFSKETRGDVLEKNPDF-ALGDVGKELGRRWREIDPELKKEFEAKAA 605
Query: 111 KLKSEYGKKMNAY 123
K Y M Y
Sbjct: 606 DAKVAYEAAMKEY 618
>gi|195167323|ref|XP_002024483.1| GL15829 [Drosophila persimilis]
gi|194107881|gb|EDW29924.1| GL15829 [Drosophila persimilis]
Length = 173
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
+K KDPN PKR SAFF F + R K NP V + K G KW + P K Y
Sbjct: 41 RKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEY-GVGDIAKELGRKWSDVDPEVKQKY 99
Query: 106 ESKAEKLKSEYGKKMNAY 123
ES AE+ K+ Y ++M Y
Sbjct: 100 ESMAERDKARYEREMTEY 117
>gi|312075672|ref|XP_003140521.1| high mobility group protein 1.2 [Loa loa]
gi|307764316|gb|EFO23550.1| high mobility group protein 1.2 [Loa loa]
Length = 211
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
++ K+ KKDPN PKR SAFF F + R ++++P V V + G WK++ E+
Sbjct: 85 RKRKRVKKDPNAPKRALSAFFFFSHDKRPEVQQQHPE-WKVGQVAQELGRFWKALGEEER 143
Query: 103 APYESKAEKLKSEYGKKMNAYNKKQVTNLVPF 134
A YE KA + K Y ++M Y V + P
Sbjct: 144 AVYERKALEDKERYAEEMRNYKGTPVQTITPM 175
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 46 KKAKKDPNKPKRPPSAFFVFL--EEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKA 103
+++ K P + K P FFV + EE +K + EN VT +S K KWK+MS EK
Sbjct: 2 RESAKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEIS---KKCSEKWKTMSDDEKR 58
Query: 104 PYESKAEKLKSEYGKKMNAY 123
+ A+K Y ++ AY
Sbjct: 59 RFFELAQKDAERYQAEVAAY 78
>gi|392873666|gb|AFM85665.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|449472784|ref|XP_002193745.2| PREDICTED: TOX high mobility group box family member 3 [Taeniopygia
guttata]
Length = 574
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 2 KGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSA 61
K A ++ +++E ++R G+++AA DSG K + +KK KKDPN+P++P SA
Sbjct: 205 KSATPSPSSSINEEDADESNRATGEKRAAP---DSGKKPK-TPKKKKKKDPNEPQKPVSA 260
Query: 62 FFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMN 121
+ +F + + K +NPN T V K W S+ +K Y+ K E K EY K +
Sbjct: 261 YALFFRDTQAAIKGQNPNAT-FGDVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALA 319
Query: 122 AYNKKQV 128
AY V
Sbjct: 320 AYRASLV 326
>gi|345320167|ref|XP_001521836.2| PREDICTED: FACT complex subunit SSRP1-like, partial
[Ornithorhynchus anatinus]
Length = 295
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKA 109
KDPN PKRP SA+ ++L R+ K ++P ++ ++ + K AG WK M+ +K ++ KA
Sbjct: 122 KDPNAPKRPMSAYMLWLNASREKIKADHPGIS-ITDLSKKAGEIWKGMTKEKKEEWDRKA 180
Query: 110 EKLKSEYGKKMNAYNK 125
E+ K EY K M Y++
Sbjct: 181 EEAKREYEKAMKEYSE 196
>gi|392881066|gb|AFM89365.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|453083241|gb|EMF11287.1| HMG_box-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 109
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 47 KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYE 106
K KKDPN PKR SA+ F + R +++NP + VGK G +WK+++ +KAPYE
Sbjct: 22 KRKKDPNMPKRGLSAYMFFANDTRDKVREDNPGIK-FGEVGKLLGERWKALNEKQKAPYE 80
Query: 107 SKAEKLKSEYGKKMNAYN 124
+KA K Y ++ AY
Sbjct: 81 AKAAADKKRYEEEKAAYT 98
>gi|392884250|gb|AFM90957.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|392878084|gb|AFM87874.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|392877754|gb|AFM87709.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|387913840|gb|AFK10529.1| high mobility group protein B1-like protein [Callorhinchus milii]
gi|392873522|gb|AFM85593.1| high mobility group protein [Callorhinchus milii]
gi|392873780|gb|AFM85722.1| high mobility group protein [Callorhinchus milii]
gi|392873902|gb|AFM85783.1| high mobility group protein [Callorhinchus milii]
gi|392873908|gb|AFM85786.1| high mobility group protein [Callorhinchus milii]
gi|392873950|gb|AFM85807.1| high mobility group protein [Callorhinchus milii]
gi|392873998|gb|AFM85831.1| high mobility group protein [Callorhinchus milii]
gi|392874244|gb|AFM85954.1| high mobility group protein [Callorhinchus milii]
gi|392874940|gb|AFM86302.1| high mobility group protein [Callorhinchus milii]
gi|392876248|gb|AFM86956.1| high mobility group protein [Callorhinchus milii]
gi|392876254|gb|AFM86959.1| high mobility group protein [Callorhinchus milii]
gi|392876362|gb|AFM87013.1| high mobility group protein [Callorhinchus milii]
gi|392876946|gb|AFM87305.1| high mobility group protein [Callorhinchus milii]
gi|392877468|gb|AFM87566.1| high mobility group protein [Callorhinchus milii]
gi|392877522|gb|AFM87593.1| high mobility group protein [Callorhinchus milii]
gi|392877744|gb|AFM87704.1| high mobility group protein [Callorhinchus milii]
gi|392879776|gb|AFM88720.1| high mobility group protein [Callorhinchus milii]
gi|392880382|gb|AFM89023.1| high mobility group protein [Callorhinchus milii]
gi|392880776|gb|AFM89220.1| high mobility group protein [Callorhinchus milii]
gi|392881032|gb|AFM89348.1| high mobility group protein [Callorhinchus milii]
gi|392881292|gb|AFM89478.1| high mobility group protein [Callorhinchus milii]
gi|392881318|gb|AFM89491.1| high mobility group protein [Callorhinchus milii]
gi|392883640|gb|AFM90652.1| high mobility group protein [Callorhinchus milii]
gi|392883646|gb|AFM90655.1| high mobility group protein [Callorhinchus milii]
gi|392883680|gb|AFM90672.1| high mobility group protein [Callorhinchus milii]
gi|392883988|gb|AFM90826.1| high mobility group protein [Callorhinchus milii]
gi|392884098|gb|AFM90881.1| high mobility group protein [Callorhinchus milii]
gi|392884156|gb|AFM90910.1| high mobility group protein [Callorhinchus milii]
gi|392884178|gb|AFM90921.1| high mobility group protein [Callorhinchus milii]
gi|392884306|gb|AFM90985.1| high mobility group protein [Callorhinchus milii]
gi|392884308|gb|AFM90986.1| high mobility group protein [Callorhinchus milii]
gi|392884314|gb|AFM90989.1| high mobility group protein [Callorhinchus milii]
gi|392884420|gb|AFM91042.1| high mobility group protein [Callorhinchus milii]
gi|392884450|gb|AFM91057.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
>gi|384500858|gb|EIE91349.1| hypothetical protein RO3G_16060 [Rhizopus delemar RA 99-880]
Length = 316
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEK 102
K + K D N P +PPSA+ +F + R K++N + T + K G +WKS+S EK
Sbjct: 158 KYHRHPKPDTNAPVKPPSAYVMFSNDIRAELKQQNRSFTDL---AKIIGDRWKSISAEEK 214
Query: 103 APYESKAEKLKSEYGKKMNAYNK 125
YE+KA K + +Y K++ Y K
Sbjct: 215 ELYETKALKAREKYLKEIEEYQK 237
>gi|444526057|gb|ELV14266.1| High mobility group protein B1 [Tupaia chinensis]
Length = 166
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPY 105
KK KDPN PKRPPSAFF+F E+ K E+P + + V K G W + EK PY
Sbjct: 74 KKKFKDPNTPKRPPSAFFLFCSEYSPKIKGEHPGL-PIGDVTKKLGEMWNNTGADEKQPY 132
Query: 106 ESKAEKLKSEYGKKMNAY 123
E KA KLK +Y K + AY
Sbjct: 133 EKKAAKLKEKYEKDIAAY 150
>gi|367052681|ref|XP_003656719.1| hypothetical protein THITE_2121767 [Thielavia terrestris NRRL 8126]
gi|347003984|gb|AEO70383.1| hypothetical protein THITE_2121767 [Thielavia terrestris NRRL 8126]
Length = 545
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Query: 14 QEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTF 73
Q+A+K G R A T + +KR+ +R K D N P+RPPSA+ +F + R+
Sbjct: 83 QDAVKTESPTPGGRGAITVVV---TKRKYRRHPKP--DENAPERPPSAYVLFSNKMREEL 137
Query: 74 KKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEYGKKMNAYNK 125
K N + + + K G W++++ AEK P+ES+A+ +K +Y + Y +
Sbjct: 138 KGRN---LSFAEIAKLVGVNWQNLTAAEKEPFESQAQAIKDKYLSDLAVYKQ 186
>gi|392878832|gb|AFM88248.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 48 AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYE 106
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 2 GKRDPRQPRGKTSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFE 61
Query: 107 SKAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 62 GLAKNDKVRYDREMRNY 78
>gi|392883682|gb|AFM90673.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPAEKAPYESKAEKLKSEY 116
RPPSAFF+F + R + ENP ++ + V K G W ++ +K PYE + +LK +Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGIS-IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 117 GKKMNAY 123
K++ AY
Sbjct: 155 EKEVAAY 161
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMSPAEKAPYES 107
K+DP +P+ S++ F++ R+ KK++P+ + S K +WK+M+P +K +E
Sbjct: 3 KRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFED 62
Query: 108 KAEKLKSEYGKKMNAY 123
A+ K Y ++M Y
Sbjct: 63 LAKNDKVRYDREMRNY 78
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.309 0.126 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,201,297,281
Number of Sequences: 23463169
Number of extensions: 82187125
Number of successful extensions: 487813
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2388
Number of HSP's successfully gapped in prelim test: 5287
Number of HSP's that attempted gapping in prelim test: 474322
Number of HSP's gapped (non-prelim): 12015
length of query: 147
length of database: 8,064,228,071
effective HSP length: 110
effective length of query: 37
effective length of database: 9,778,246,777
effective search space: 361795130749
effective search space used: 361795130749
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 71 (32.0 bits)