BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032106
(147 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q86V88|MGDP1_HUMAN Magnesium-dependent phosphatase 1 OS=Homo sapiens GN=MDP1 PE=1 SV=1
Length = 176
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 71/115 (61%), Gaps = 2/115 (1%)
Query: 4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHF 63
LYP +L L+ G+ A ASR+ + AN LE ++ FV +EI+ K HF
Sbjct: 47 LYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPG--SKITHF 104
Query: 64 QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQ 118
+R+ +TG+PF+ M+FFDDE RNI VSK+GVT I + NG+NL L QGL F++
Sbjct: 105 ERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQGLETFAK 159
>sp|Q9D967|MGDP1_MOUSE Magnesium-dependent phosphatase 1 OS=Mus musculus GN=Mdp1 PE=1 SV=1
Length = 164
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Query: 4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHF 63
LYP +L L+ G+ VA ASR+ AN LE ++ F+ +EI+ K HF
Sbjct: 47 LYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPG--SKVTHF 104
Query: 64 QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQ 118
+R+H +TGVPF+ M+FFDDE+RNI V ++GVT I + +G++L L QGL F++
Sbjct: 105 ERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFAK 159
>sp|O94279|MGDP1_SCHPO Putative magnesium-dependent phosphatase P8B7.31
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBP8B7.31 PE=1 SV=2
Length = 172
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Query: 3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK---SMFVAKEIFS---SW 56
Y GIL L+++ + + VASR+ +P A L + + S+ A E F+ +W
Sbjct: 51 CFYSDITGILQELRNQKVTLCVASRTCAPKYAKQALNLMKVPIDGSLKPAIEFFTYVKAW 110
Query: 57 -SHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVT 96
K DHF+ IH+ +G+ + M+FFDDE RN + V ++GVT
Sbjct: 111 PGSKMDHFKEIHNESGIDYREMVFFDDESRNRE-VERLGVT 150
>sp|Q3YWN8|GPH_SHISS Phosphoglycolate phosphatase OS=Shigella sonnei (strain Ss046)
GN=SSON_3516 PE=3 SV=1
Length = 252
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF---VAKEIFSSWSHKT 60
L+PH L AL+ KG+ + + + P+P +A LE L+I F + + +
Sbjct: 112 LFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNKKPHP 170
Query: 61 DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
D + R G+ MLF D +I A G + + G N G
Sbjct: 171 DPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYG 217
>sp|P32662|GPH_ECOLI Phosphoglycolate phosphatase OS=Escherichia coli (strain K12)
GN=gph PE=1 SV=1
Length = 252
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF---VAKEIFSSWSHKT 60
L+PH L AL+ KG+ + + + P+P +A LE L+I F + + +
Sbjct: 112 LFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNKKPHP 170
Query: 61 DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
D + R G+ MLF D +I A G + + G N G
Sbjct: 171 DPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYG 217
>sp|Q31VP9|GPH_SHIBS Phosphoglycolate phosphatase OS=Shigella boydii serotype 4 (strain
Sb227) GN=SBO_3372 PE=3 SV=1
Length = 252
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF---VAKEIFSSWSHKT 60
L+PH L AL+ KG+ + + + P+P +A LE L+I F + + +
Sbjct: 112 LFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNKKPHP 170
Query: 61 DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
D + R G+ MLF D +I A G + + G N G
Sbjct: 171 DPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYG 217
>sp|Q83PX1|GPH_SHIFL Phosphoglycolate phosphatase OS=Shigella flexneri GN=SF3403 PE=3
SV=1
Length = 252
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF---VAKEIFSSWSHKT 60
L+PH L AL+ KG+ + + + P+P +A LE L+I F + + +
Sbjct: 112 LFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNKKPHP 170
Query: 61 DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
D + R G+ MLF D +I A G + + G N G
Sbjct: 171 DPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYG 217
>sp|Q8FCW0|GPH_ECOL6 Phosphoglycolate phosphatase OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=c4155 PE=3 SV=1
Length = 252
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF---VAKEIFSSWSHKT 60
L+PH L AL+ KG+ + + + P+P +A LE L+I F + + +
Sbjct: 112 LFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNKKPHP 170
Query: 61 DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
D + R G+ MLF D +I A G + + G N G
Sbjct: 171 DPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYG 217
>sp|P58422|GPH_ECO57 Phosphoglycolate phosphatase OS=Escherichia coli O157:H7 GN=gph
PE=3 SV=1
Length = 252
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF---VAKEIFSSWSHKT 60
L+PH L AL+ KG+ + + + P+P +A LE L+I F + + +
Sbjct: 112 LFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNKKPHP 170
Query: 61 DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
D + R G+ MLF D +I A G + + G N G
Sbjct: 171 DPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYG 217
>sp|Q32AJ7|GPH_SHIDS Phosphoglycolate phosphatase OS=Shigella dysenteriae serotype 1
(strain Sd197) GN=SDY_3694 PE=3 SV=1
Length = 252
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF---VAKEIFSSWSHKT 60
L+PH L AL+ KG+ + + + P+P +A LE L+I F + + +
Sbjct: 112 LFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNKKPHP 170
Query: 61 DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
D + R G+ MLF D +I A G + + G N G
Sbjct: 171 DPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYG 217
>sp|Q55039|GPH_SYNE7 Phosphoglycolate phosphatase OS=Synechococcus elongatus (strain PCC
7942) GN=cbbZ PE=3 SV=2
Length = 212
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHF 63
L+P +L L+ + + + + S + +I FL++ ++S+F + + K
Sbjct: 82 LFPGVADLLAQLRSRSLCLGILSSNSRQNI-EAFLQRQGLRSLFSVVQAGTPILSKRRAL 140
Query: 64 QRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNW 120
++ +R G ++++ DE R+++A ++G+ + V G N RQ L +W
Sbjct: 141 SQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFN---DRQSLVAACPDW 194
>sp|Q8Z202|GPH_SALTI Phosphoglycolate phosphatase OS=Salmonella typhi GN=gph PE=3 SV=1
Length = 252
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 4/107 (3%)
Query: 4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDH- 62
L+PH L AL G+ + + + P+P +A LE L+I F +K H
Sbjct: 112 LFPHVADTLGALHASGLSLGLVTNKPTPFVA-PLLESLDIAKYFSVVIGGDDVQNKKPHP 170
Query: 63 --FQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
+ SR G+ MLF D +I A G + + G N G
Sbjct: 171 EPLLLVASRLGMTPEQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYG 217
>sp|Q5PLX6|GPH_SALPA Phosphoglycolate phosphatase OS=Salmonella paratyphi A (strain ATCC
9150 / SARB42) GN=SPA3347 PE=3 SV=1
Length = 252
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 4/107 (3%)
Query: 4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDH- 62
L+PH L AL G+ + + + P+P +A LE L+I F +K H
Sbjct: 112 LFPHVADTLGALHASGLSLGLVTNKPTPFVA-PLLESLDIAKYFSVVIGGDDVQNKKPHP 170
Query: 63 --FQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
+ SR G+ MLF D +I A G + + G N G
Sbjct: 171 EPLLLVASRLGMTPEQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYG 217
>sp|Q57IZ2|GPH_SALCH Phosphoglycolate phosphatase OS=Salmonella choleraesuis (strain
SC-B67) GN=SCH_3414 PE=3 SV=1
Length = 252
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 4/107 (3%)
Query: 4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDH- 62
L+PH L AL G+ + + + P+P +A LE L+I F +K H
Sbjct: 112 LFPHVADTLGALNASGLSLGLVTNKPTPFVA-PLLESLDIAKYFSVVIGGDDVQNKKPHP 170
Query: 63 --FQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
+ SR G+ MLF D +I A G + + G N G
Sbjct: 171 EPLLLVASRLGMMPEQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYG 217
>sp|Q8ZLK5|GPH_SALTY Phosphoglycolate phosphatase OS=Salmonella typhimurium (strain LT2
/ SGSC1412 / ATCC 700720) GN=gph PE=3 SV=1
Length = 252
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 4/107 (3%)
Query: 4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDH- 62
L+PH L AL G+ + + + P+P +A LE L+I F +K H
Sbjct: 112 LFPHVADTLGALHASGLSLGLVTNKPTPFVA-PLLESLDIAKYFSVVIGGDDVQNKKPHP 170
Query: 63 --FQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
+ SR G+ MLF D +I A G + + G N G
Sbjct: 171 EPLLLVASRLGMMPEQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYG 217
>sp|P40081|MGDP1_YEAST Putative magnesium-dependent phosphatase YER134C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YER134C PE=1
SV=1
Length = 178
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 12/114 (10%)
Query: 3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIF--------- 53
++Y IL LKD G+ + ASR+ +P+IA L+ +K V +
Sbjct: 51 TIYKDIPRILGDLKDNGVKLMTASRTWAPEIAQEILKIFKVKYAGVVTPLANLFDEFQWG 110
Query: 54 --SSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVN 105
S H D + +++ + + + FDDE RN + V K GV + V + N
Sbjct: 111 ERSKIGHLRDGLKDLYNTSDLKSKKICLFDDESRNKE-VEKYGVKFVYVRDPEN 163
>sp|P70947|YITU_BACSU Putative phosphatase YitU OS=Bacillus subtilis (strain 168) GN=yitU
PE=3 SV=1
Length = 270
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 51 EIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALR 110
EI S +K Q+I GVP ++ F DED +++ + G G+ +GNG++ A++
Sbjct: 189 EIIKSGMNKAVGLQKISDYYGVPRERIIAFGDEDNDLEMLEFAG-CGVAMGNGID--AVK 245
Query: 111 QGLTKFSQNWNTSQKNKQKWISKF 134
Q + T+ N++ +++F
Sbjct: 246 QIANR------TTATNEEDGVARF 263
>sp|P30822|XPO1_YEAST Exportin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=CRM1 PE=1 SV=1
Length = 1084
Score = 34.3 bits (77), Expect = 0.27, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 97 GIL-VGNGVNLGALRQGLTKFSQNWNTSQKNKQKWISKFSQKPDSSEKIDQ 146
GIL N +++ L Q ++ F Q QK Q+ ++KF PD+ +K DQ
Sbjct: 3 GILDFSNDLDIALLDQVVSTFYQGSGVQQKQAQEILTKFQDNPDAWQKADQ 53
>sp|Q9EYY5|GPH_ENTAE Phosphoglycolate phosphatase OS=Enterobacter aerogenes GN=gph PE=3
SV=1
Length = 253
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 4/107 (3%)
Query: 4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDH- 62
L+P L AL KG+ +A+ + P+P +A L+ L+I F +K H
Sbjct: 113 LFPAVADTLGALHAKGLPLALITNKPTPFVA-PLLDALDIAKYFTVVIGGDDVQNKKPHP 171
Query: 63 --FQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
+ + + +LF D +I A G + + G N G
Sbjct: 172 EPLLLVAEKLSLAPAELLFVGDSRNDIQAAKAAGCCSVGLTYGYNYG 218
>sp|P0A8Y4|YIHX_SHIFL Alpha-D-glucose-1-phosphate phosphatase YihX OS=Shigella flexneri
GN=yihX PE=3 SV=1
Length = 199
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWS----- 57
+L P I+H L+++G V V S + + TF + + A I+ S
Sbjct: 84 ALRPEVIAIMHKLREQGHRVVVLSNTNR--LHTTFWPEEYPEIRDAADHIYLSQDLGMRK 141
Query: 58 HKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILV 100
+ +Q + G + +FFDD NI+ +++G+T ILV
Sbjct: 142 PEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 184
>sp|P0A8Y3|YIHX_ECOLI Alpha-D-glucose-1-phosphate phosphatase YihX OS=Escherichia coli
(strain K12) GN=yihX PE=1 SV=1
Length = 199
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWS----- 57
+L P I+H L+++G V V S + + TF + + A I+ S
Sbjct: 84 ALRPEVIAIMHKLREQGHRVVVLSNTNR--LHTTFWPEEYPEIRDAADHIYLSQDLGMRK 141
Query: 58 HKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILV 100
+ +Q + G + +FFDD NI+ +++G+T ILV
Sbjct: 142 PEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 184
>sp|Q9RZU9|COBQ_DEIRA Cobyric acid synthase OS=Deinococcus radiodurans (strain ATCC 13939
/ DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB
9279 / R1 / VKM B-1422) GN=cobQ PE=3 SV=2
Length = 474
Score = 32.3 bits (72), Expect = 1.0, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 2 PSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKE 51
P L+P KG LH+L D+ DV V + SP A L +I +M VA+E
Sbjct: 109 PRLWPFVKGALHSLLDE-FDVVVIEGAGSP--AEVNLRPSDIVNMRVARE 155
>sp|Q5H0Y0|MTNC_XANOR Enolase-phosphatase E1 OS=Xanthomonas oryzae pv. oryzae (strain
KACC10331 / KXO85) GN=mtnC PE=3 SV=1
Length = 232
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 63 FQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILV 100
++RI R GVP + +LF D +DA + G+ L+
Sbjct: 166 YRRIAERIGVPASEILFLSDVIEELDAAKRTGIRTALL 203
>sp|P23678|UN104_CAEEL Kinesin-like protein unc-104 OS=Caenorhabditis elegans GN=unc-104
PE=2 SV=3
Length = 1584
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 9/80 (11%)
Query: 13 HALKDKGIDVAVASRSPS--------PDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQ 64
H LKDKGIDV +P P + LEKL +A EI +W K H +
Sbjct: 374 HILKDKGIDVTDVQETPGKHKKGPKLPAHVHEQLEKLQESEKLMA-EIGKTWEQKLIHTE 432
Query: 65 RIHSRTGVPFNSMLFFDDED 84
I + M ED
Sbjct: 433 EIRKQREEELRDMGLACAED 452
>sp|P77366|PGMB_ECOLI Beta-phosphoglucomutase OS=Escherichia coli (strain K12) GN=ycjU
PE=1 SV=1
Length = 219
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 3 SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHK--- 59
++ P + +L L+ + I V +AS S + A T L L ++ F S +
Sbjct: 93 AVLPGIRSLLADLRAQQISVGLASVSLN---APTILAALELREFFTFCADASQLKNSKPD 149
Query: 60 TDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVN 105
+ F + GVP + + +D IDA++ G+ + +G G+
Sbjct: 150 PEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLT 195
>sp|B2SM84|MTNC_XANOP Enolase-phosphatase E1 OS=Xanthomonas oryzae pv. oryzae (strain
PXO99A) GN=mtnC1 PE=3 SV=1
Length = 232
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 63 FQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILV 100
++RI R GVP + +LF D +DA + G+ L+
Sbjct: 166 YRRIAERIGVPASEILFLSDVIEELDAAKRTGMRTALL 203
>sp|Q04583|ORF4_SHVX Uncharacterized ORF4 protein OS=Shallot virus X GN=ORF4 PE=4 SV=1
Length = 380
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%)
Query: 74 FNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQNWNTSQKNKQKWISK 133
N++ + + N+D++ M L+ G L L+ + +QN NT Q ++QK ++
Sbjct: 156 LNTLEWLTHINHNLDSMLNMLNPANLMSQGTPLSRLKDAVRTLTQNMNTIQSDQQKILAS 215
Query: 134 FS 135
S
Sbjct: 216 TS 217
>sp|Q2P3W6|MTNC_XANOM Enolase-phosphatase E1 OS=Xanthomonas oryzae pv. oryzae (strain
MAFF 311018) GN=mtnC PE=3 SV=1
Length = 232
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 63 FQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILV 100
++RI R GVP + +LF D +DA + G+ L+
Sbjct: 166 YRRIAERIGVPASEILFLSDVIEELDAAKRTGMRTALL 203
>sp|Q9Y3P9|RBGP1_HUMAN Rab GTPase-activating protein 1 OS=Homo sapiens GN=RABGAP1 PE=1
SV=3
Length = 1069
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 7/57 (12%)
Query: 28 SPSPDIANTFLEKLNIKSMFVAKE-----IFSSWSHKTDHFQRIHSRTGVPFNSMLF 79
SP D+ N+ + L+++SM + + I SW+ K+ HFQ ++ T P + +LF
Sbjct: 352 SPGKDVRNSDMHLLDLESMGKSSDGKSYVITGSWNPKSPHFQVVNEET--PKDKVLF 406
>sp|Q5RAN1|RBGP1_PONAB Rab GTPase-activating protein 1 OS=Pongo abelii GN=RABGAP1 PE=2
SV=1
Length = 1069
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 7/57 (12%)
Query: 28 SPSPDIANTFLEKLNIKSMFVAKE-----IFSSWSHKTDHFQRIHSRTGVPFNSMLF 79
SP D+ N+ + L+++SM + + I SW+ K+ HFQ ++ T P + +LF
Sbjct: 352 SPGKDVRNSDMHLLDLESMGKSSDGKSYVITGSWNPKSPHFQVVNEET--PKDKVLF 406
>sp|A2AWA9|RBGP1_MOUSE Rab GTPase-activating protein 1 OS=Mus musculus GN=Rabgap1 PE=2
SV=1
Length = 1064
Score = 30.8 bits (68), Expect = 3.0, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 7/57 (12%)
Query: 28 SPSPDIANTFLEKLNIKSMFVAKE-----IFSSWSHKTDHFQRIHSRTGVPFNSMLF 79
SP D+ N+ + L+++SM + + I SW+ K+ HFQ ++ T P + +LF
Sbjct: 347 SPGKDVRNSDMHLLDLESMGKSSDGKSYVITGSWNPKSPHFQVVNEET--PKDKVLF 401
>sp|Q03ES2|MUTS2_PEDPA MutS2 protein OS=Pediococcus pentosaceus (strain ATCC 25745 /
183-1w) GN=mutS2 PE=3 SV=1
Length = 785
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 82 DEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQN 119
+ DR IDA G + + +G GALR G+TK+ +N
Sbjct: 723 ETDRYIDAALLAGYDEVTIVHGKGTGALRSGITKYLKN 760
>sp|Q48NS2|GPH_PSE14 Phosphoglycolate phosphatase OS=Pseudomonas syringae pv.
phaseolicola (strain 1448A / Race 6) GN=PSPPH_0648 PE=3
SV=2
Length = 272
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 4/107 (3%)
Query: 4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF---VAKEIFSSWSHKT 60
+YP + L L+ G+++A+ + P +A L+++ + F + +
Sbjct: 102 VYPGVRETLKWLQKMGVEMALITNKPERFVA-PLLDEMKLGRFFRWIIGGDTMPQKKPDP 160
Query: 61 DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
+ GVP + LF D ++ A GV + + G N G
Sbjct: 161 AALFFVMKMAGVPASQALFVGDSRSDVQAAKAAGVACVALSYGYNHG 207
>sp|Q0VD27|ENOPH_BOVIN Enolase-phosphatase E1 OS=Bos taurus GN=ENOPH1 PE=2 SV=1
Length = 261
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 59 KTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFS 117
+++ +Q+I S G N++LF D R A + GV +V N G T FS
Sbjct: 189 ESESYQKIASSIGCSTNNILFLTDVSREASAAEEAGVHVAVVVRPGNAGLTDDEKTHFS 247
>sp|Q8ZJF3|GPH_YERPE Phosphoglycolate phosphatase OS=Yersinia pestis GN=gph PE=3 SV=1
Length = 232
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 16/113 (14%)
Query: 4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF---------VAKEIFS 54
L+P K L L G+ + + + P+P +A L L I F V K+
Sbjct: 95 LFPQVKATLAQLAANGLPIGLITNKPTPFVA-PLLTSLGISDYFSVIIGGDDVVVKKPHP 153
Query: 55 SWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
+ + +H+R MLF D +I A G I + G N G
Sbjct: 154 APLYLLLGKLGLHAR------EMLFVGDSRNDIMAAQAAGCPCIGLTYGYNYG 200
>sp|Q3ZUZ9|MTNC_CROSK Enolase-phosphatase E1 OS=Cronobacter sakazakii GN=mtnC PE=3 SV=1
Length = 229
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 11/98 (11%)
Query: 4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFL-------EKLNIKSMFVAKEIFSSW 56
LYP L D+ ID+ + S P A L + + S F + +
Sbjct: 103 LYPDVVPALRRWSDQDIDIYIYSSGSVP--AQKLLFSHSDEGDVTELLSGFFDTHVGAK- 159
Query: 57 SHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMG 94
+ ++ I +TGVP + MLF D +DA + G
Sbjct: 160 -RQVSSYRNISMKTGVPVHQMLFLSDIREELDAAREAG 196
>sp|A1AW99|ILVC_RUTMC Ketol-acid reductoisomerase OS=Ruthia magnifica subsp.
Calyptogena magnifica GN=ilvC PE=3 SV=1
Length = 334
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 8 AKGILHA--LKDKGIDVAVASRSPSPDIANTFLEKLNIKSM 46
++G HA LKD G++V VA R+ S F+ L +KS+
Sbjct: 26 SQGHAHANNLKDSGVEVVVALRADSASTEKAFVAGLTVKSI 66
>sp|Q88A30|GPH_PSESM Phosphoglycolate phosphatase OS=Pseudomonas syringae pv. tomato
(strain DC3000) GN=PSPTO_0567 PE=3 SV=2
Length = 272
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 4/107 (3%)
Query: 4 LYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMF---VAKEIFSSWSHKT 60
+YP + L L+ G+++A+ + P +A L+++ + F + +
Sbjct: 102 VYPGVRETLKWLQKMGVEMALITNKPERFVA-PLLDEMKLGRFFRWIIGGDTMPQKKPDP 160
Query: 61 DHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLG 107
+ GVP + LF D ++ A GV + + G N G
Sbjct: 161 AALFFVMKMAGVPASQSLFVGDSRSDVQAAKAAGVACVALSYGYNHG 207
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,330,134
Number of Sequences: 539616
Number of extensions: 2028083
Number of successful extensions: 6145
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 6110
Number of HSP's gapped (non-prelim): 46
length of query: 147
length of database: 191,569,459
effective HSP length: 106
effective length of query: 41
effective length of database: 134,370,163
effective search space: 5509176683
effective search space used: 5509176683
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)