BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032108
(147 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|351721438|ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
gi|255628281|gb|ACU14485.1| unknown [Glycine max]
Length = 128
Score = 197 bits (502), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 95/105 (90%), Positives = 99/105 (94%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWAGP+D+YLSTSLASYLDKKLLVLLRDGRKLMGTL SFDQFANAVLEGACERVIVGDL
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCDIPLGLYVIRGENVVLIGELDLER+ELP H+T VS AEIKR
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQ 105
>gi|255583960|ref|XP_002532727.1| lsm1, putative [Ricinus communis]
gi|223527535|gb|EEF29658.1| lsm1, putative [Ricinus communis]
Length = 128
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 92/105 (87%), Positives = 99/105 (94%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWAGP+D+YLSTSLASYLDKKLLVLLRDGRKLMG L SFDQFANAVLEGACERVIVGDL
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCDIPLGLY+IRGENVVLIGELDLE++ELPPH+T VS AEI+R
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDLEKEELPPHMTRVSAAEIRRAQ 105
>gi|225442069|ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
vinifera]
gi|147803430|emb|CAN62239.1| hypothetical protein VITISV_033727 [Vitis vinifera]
gi|297742980|emb|CBI35847.3| unnamed protein product [Vitis vinifera]
Length = 128
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/105 (87%), Positives = 98/105 (93%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWAGP+D+YLSTSLASYLDKKLLVLLRD RKL+G L SFDQFANAVLEGACERVIVGDL
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDL 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCDIPLGLYVIRGENVVLIGELDLE++ELPPH+T VS AEIKR
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSAAEIKRAQ 105
>gi|224073612|ref|XP_002304120.1| predicted protein [Populus trichocarpa]
gi|222841552|gb|EEE79099.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/105 (88%), Positives = 97/105 (92%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWAGP+D+YLSTSLASYLDKKLLVLLRDGRKLMG L SFDQFANAVLEGACER IVGDL
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERAIVGDL 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCDI LGLYVIRGENVVLIGELDLER+ELPPH+T VS AEIKR
Sbjct: 61 YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIKRAQ 105
>gi|224119520|ref|XP_002331181.1| predicted protein [Populus trichocarpa]
gi|118489961|gb|ABK96777.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222873302|gb|EEF10433.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/105 (87%), Positives = 98/105 (93%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWAGP+D+YLSTSLA+YLDKKLLVLLRDGRKLMG L SFDQFANAVLEGACERVIVGDL
Sbjct: 1 MSWAGPEDIYLSTSLANYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGDL 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCDI LGLYVIRGENVVLIGELDLER+ELPPH+T VS AEI+R
Sbjct: 61 YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIRRAQ 105
>gi|18400270|ref|NP_566476.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|30682974|ref|NP_850580.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|21536995|gb|AAM61336.1| Sm protein, putative [Arabidopsis thaliana]
gi|27754337|gb|AAO22620.1| putative Sm protein [Arabidopsis thaliana]
gi|28393853|gb|AAO42334.1| putative Sm protein [Arabidopsis thaliana]
gi|332641944|gb|AEE75465.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|332641945|gb|AEE75466.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
Length = 128
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/107 (84%), Positives = 98/107 (91%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWAGP+++YLSTSLASYLD+KLLVLLRDGRKLMGTL SFDQFANAVLEGACERVIVG+
Sbjct: 1 MSWAGPEEIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVSAL 107
YCDIPLGLYVIRGENVVLIGELD ER+ELPPH+ VS AEIKR +
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDTEREELPPHMIRVSEAEIKRAQKV 107
>gi|357514091|ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
gi|355521356|gb|AET01810.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
Length = 131
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/103 (86%), Positives = 97/103 (94%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWA P+D+YLSTSLASYLDKKLL+LLRDGRKLMGTL SFDQFANAVLEGACERVIVGDL
Sbjct: 1 MSWAAPEDLYLSTSLASYLDKKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKR 103
YCDIPLGLYVIRGENVVLIGE+D+ER+ELPPH+T V EI+R
Sbjct: 61 YCDIPLGLYVIRGENVVLIGEMDVEREELPPHMTRVPTEEIRR 103
>gi|297829970|ref|XP_002882867.1| hypothetical protein ARALYDRAFT_478821 [Arabidopsis lyrata subsp.
lyrata]
gi|297328707|gb|EFH59126.1| hypothetical protein ARALYDRAFT_478821 [Arabidopsis lyrata subsp.
lyrata]
Length = 128
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/107 (84%), Positives = 98/107 (91%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWAGP+D+YLSTSLASYLD+KLLVLLRDGRKLMGTL SFDQFANAVLEGACERVIVG+
Sbjct: 1 MSWAGPEDIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVSAL 107
YCDIPLGLYVIRGENVVLIGELD ER+ELPP++ VS AEIKR +
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDTEREELPPNMIRVSEAEIKRAQKV 107
>gi|323650499|gb|ADX97330.1| small nuclear ribonucleoprotein [Mangifera indica]
Length = 128
Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 86/105 (81%), Positives = 95/105 (90%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWA P+D+ LSTSLA+YLDKK+LVLLRD RKL+G L SFDQFAN VLEGACER+IVGDL
Sbjct: 1 MSWASPEDISLSTSLATYLDKKILVLLRDNRKLLGLLRSFDQFANVVLEGACERIIVGDL 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCDIPLGLYVIRGENVVLIGELDLE++ELPPH+THVS EIKR
Sbjct: 61 YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTHVSTEEIKRAQ 105
>gi|449447922|ref|XP_004141715.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Cucumis
sativus]
gi|449480489|ref|XP_004155908.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Cucumis
sativus]
Length = 128
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/105 (81%), Positives = 96/105 (91%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWA +D+YLSTSLA+YLDKK+LVLLRDGRKL+G L SFDQFANAVLEG+CERVIVGDL
Sbjct: 1 MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDL 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
Y DIPLGLYVIRGENVVL+GELDLE++ELPPH+THVS EIKR
Sbjct: 61 YSDIPLGLYVIRGENVVLLGELDLEKEELPPHMTHVSAVEIKRAQ 105
>gi|359484235|ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Vitis
vinifera]
gi|297738539|emb|CBI27784.3| unnamed protein product [Vitis vinifera]
Length = 128
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/105 (81%), Positives = 95/105 (90%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWAGP+D+ STSLASYLDKKLLVLLRDGRKL+G L SFDQFANAVLEGACER IVGD+
Sbjct: 1 MSWAGPEDLLFSTSLASYLDKKLLVLLRDGRKLLGVLRSFDQFANAVLEGACERAIVGDI 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCDIPLGLYVIRGENVVL+GELDL+++ELPPH+T V AEIKR
Sbjct: 61 YCDIPLGLYVIRGENVVLLGELDLDKEELPPHMTRVPEAEIKRAQ 105
>gi|255550399|ref|XP_002516250.1| lsm1, putative [Ricinus communis]
gi|223544736|gb|EEF46252.1| lsm1, putative [Ricinus communis]
Length = 128
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/105 (84%), Positives = 96/105 (91%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWAGPDD++LSTSLA+YLDKKLLVLLRDGRKL+G L SFDQFAN VLEGACERVIVGDL
Sbjct: 1 MSWAGPDDIFLSTSLATYLDKKLLVLLRDGRKLLGILRSFDQFANVVLEGACERVIVGDL 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCDI LGLYVIRGENVVLIGELDLE++ELP H+T VS AEIKR
Sbjct: 61 YCDILLGLYVIRGENVVLIGELDLEKEELPSHMTCVSEAEIKRAQ 105
>gi|357149636|ref|XP_003575180.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
[Brachypodium distachyon]
Length = 128
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/105 (80%), Positives = 97/105 (92%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWAGP++++LSTSLA +LDKKL+VLLRDGRKL+GTLCSFDQFAN VL+GACERVIVG+L
Sbjct: 1 MSWAGPEELFLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEL 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCD+PLGLYVIRGENVVLIGELD E+DELP H+T VS AEI+R
Sbjct: 61 YCDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVSEAEIRRAE 105
>gi|115458610|ref|NP_001052905.1| Os04g0445800 [Oryza sativa Japonica Group]
gi|113564476|dbj|BAF14819.1| Os04g0445800 [Oryza sativa Japonica Group]
gi|218194932|gb|EEC77359.1| hypothetical protein OsI_16058 [Oryza sativa Indica Group]
gi|222628944|gb|EEE61076.1| hypothetical protein OsJ_14946 [Oryza sativa Japonica Group]
Length = 129
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/104 (79%), Positives = 96/104 (92%)
Query: 2 SWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLY 61
SWAGPD+++LSTSLA +LDKKL+VLLRDGRKL+GTLCSFDQFAN VL+GACERVIVG+LY
Sbjct: 3 SWAGPDEIFLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELY 62
Query: 62 CDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
CD+PLGLYVIRGENVVLIGELD E+DELP H+T VS AEI++
Sbjct: 63 CDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVSEAEIRKAE 106
>gi|116783136|gb|ABK22805.1| unknown [Picea sitchensis]
Length = 172
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/105 (80%), Positives = 94/105 (89%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWAGP+D++LSTSLASYLDKKLLVLLRDGRKL+G L SFDQFANAVLE A ER+IVGDL
Sbjct: 45 MSWAGPEDIFLSTSLASYLDKKLLVLLRDGRKLIGILRSFDQFANAVLENALERIIVGDL 104
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCD+PLGLYVIRGENVVLIGELD ER+ELP ++ HVS EIKR
Sbjct: 105 YCDLPLGLYVIRGENVVLIGELDPEREELPANMIHVSATEIKRAQ 149
>gi|326500218|dbj|BAK06198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326503284|dbj|BAJ99267.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 128
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/102 (82%), Positives = 95/102 (93%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWAGPD++ LSTSLA +LDKKL+VLLRDGRKL+GTLCSFDQFAN VL+GACERVIVG+L
Sbjct: 1 MSWAGPDEILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEL 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIK 102
YCD+PLGLYVIRGENVVLIGELD E+DELP H+T VS AEI+
Sbjct: 61 YCDVPLGLYVIRGENVVLIGELDREKDELPSHMTCVSEAEIR 102
>gi|357163727|ref|XP_003579826.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like
[Brachypodium distachyon]
Length = 128
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/102 (81%), Positives = 95/102 (93%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWAGPD++ LSTSLA +LDKKL+VLLRDGRKL+GTLCSFDQFAN VL+GACERVIVG+L
Sbjct: 1 MSWAGPDEMLLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEL 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIK 102
YCD+PLGLYVIRGENVVLIGELD E+DELP H+T VS A+I+
Sbjct: 61 YCDVPLGLYVIRGENVVLIGELDREKDELPSHMTCVSEADIR 102
>gi|18394697|ref|NP_564072.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana]
gi|15724180|gb|AAL06482.1|AF411792_1 At1g19120/F14D16_26 [Arabidopsis thaliana]
gi|20334848|gb|AAM16180.1| At1g19120/F14D16_26 [Arabidopsis thaliana]
gi|332191686|gb|AEE29807.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana]
Length = 128
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/105 (80%), Positives = 92/105 (87%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWA PDD++ STSLA+YLDKKLLVLLRDGRKLMG L SFDQFANAVLE A ERVIVGDL
Sbjct: 1 MSWAAPDDIFFSTSLAAYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEEAYERVIVGDL 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCDIPLGLY+IRGENVVLIGELD+E++ELP H+ V AEIKR
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDVEKEELPAHMVQVPEAEIKRAQ 105
>gi|242073224|ref|XP_002446548.1| hypothetical protein SORBIDRAFT_06g017930 [Sorghum bicolor]
gi|195605684|gb|ACG24672.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
gi|195619498|gb|ACG31579.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
gi|241937731|gb|EES10876.1| hypothetical protein SORBIDRAFT_06g017930 [Sorghum bicolor]
gi|413918442|gb|AFW58374.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
Length = 128
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/105 (78%), Positives = 94/105 (89%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSW+ PDD+ LSTSLA +LDKKL+VLLRDGRKL+GTLCSFDQFAN VL+GACERVIVG+
Sbjct: 1 MSWSAPDDILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQ 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCD+PLGLYVIRGENVVLIGELD E+DELP H+T VS AEI++
Sbjct: 61 YCDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVSEAEIRKAE 105
>gi|297844878|ref|XP_002890320.1| hypothetical protein ARALYDRAFT_472135 [Arabidopsis lyrata subsp.
lyrata]
gi|297336162|gb|EFH66579.1| hypothetical protein ARALYDRAFT_472135 [Arabidopsis lyrata subsp.
lyrata]
Length = 128
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/105 (79%), Positives = 92/105 (87%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWA PDD++ STSLA+YLDKKLLVLLRDGRKLMG L SFDQFANAV+E A ERVIVGDL
Sbjct: 1 MSWAAPDDIFFSTSLAAYLDKKLLVLLRDGRKLMGLLRSFDQFANAVIEEAYERVIVGDL 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCDIPLGLY+IRGENVVLIGELD+E++ELP + VS AEIKR
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDVEKEELPAQMVQVSEAEIKRAQ 105
>gi|414587041|tpg|DAA37612.1| TPA: hypothetical protein ZEAMMB73_983155 [Zea mays]
Length = 120
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/115 (74%), Positives = 99/115 (86%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSW+ PDD+ LSTSLA +LDKKL+VLLRDGRKL+GTLCSFDQFAN VL+GACERVIVG+
Sbjct: 1 MSWSAPDDILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQ 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVSALFFSLLFLS 115
YCD+PLGLYVIRGENVVLIGELD E+DELP H+T V AEI++V A S+L L
Sbjct: 61 YCDVPLGLYVIRGENVVLIGELDHEKDELPAHMTCVLEAEIRKVFADPQSILVLK 115
>gi|21537395|gb|AAM61736.1| unknown [Arabidopsis thaliana]
Length = 128
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/105 (80%), Positives = 91/105 (86%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWA PDD++ STSLA YLDKKLLVLLRDGRKLMG L SFDQFANAVLE A ERVIVGDL
Sbjct: 1 MSWAAPDDIFFSTSLAPYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEEAYERVIVGDL 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCDIPLGLY+IRGENVVLIGELD+E++ELP H+ V AEIKR
Sbjct: 61 YCDIPLGLYIIRGENVVLIGELDVEKEELPAHMLQVPEAEIKRAQ 105
>gi|357450125|ref|XP_003595339.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
gi|355484387|gb|AES65590.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
Length = 128
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/105 (80%), Positives = 95/105 (90%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWA PD++ LSTSLA+YLDKKLLVLLRDGRKL+G L SFDQFAN VLEGACERVIVGDL
Sbjct: 1 MSWAAPDELLLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCD+PLGLYVIRGENVVLIGELDL ++ELPPH+T VS A+I++
Sbjct: 61 YCDVPLGLYVIRGENVVLIGELDLGKEELPPHMTCVSEADIRKAQ 105
>gi|388508644|gb|AFK42388.1| unknown [Medicago truncatula]
Length = 128
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/105 (79%), Positives = 95/105 (90%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWA PD++ LSTSLA+YLDKKLLVLLRDGRKL+G L SFDQFAN VL+GACERVIVGDL
Sbjct: 1 MSWAAPDELLLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLKGACERVIVGDL 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCD+PLGLYVIRGENVVLIGELDL ++ELPPH+T VS A+I++
Sbjct: 61 YCDVPLGLYVIRGENVVLIGELDLGKEELPPHMTCVSEADIRKAQ 105
>gi|414587042|tpg|DAA37613.1| TPA: small nuclear ribonucleoprotein LSM1 [Zea mays]
Length = 128
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/105 (77%), Positives = 93/105 (88%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSW+ PDD+ LSTSLA +LDKKL+VLLRDGRKL+GTLCSFDQFAN VL+GACERVIVG+
Sbjct: 1 MSWSAPDDILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQ 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCD+PLGLYVIRGENVVLIGELD E+DELP H+T V AEI++
Sbjct: 61 YCDVPLGLYVIRGENVVLIGELDHEKDELPAHMTCVLEAEIRKAE 105
>gi|38344547|emb|CAD40963.2| OSJNBa0027P08.15 [Oryza sativa Japonica Group]
gi|116310232|emb|CAH67241.1| OSIGBa0140O07.9 [Oryza sativa Indica Group]
Length = 136
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/111 (74%), Positives = 96/111 (86%), Gaps = 7/111 (6%)
Query: 2 SWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLY 61
SWAGPD+++LSTSLA +LDKKL+VLLRDGRKL+GTLCSFDQFAN VL+GACERVIVG+LY
Sbjct: 3 SWAGPDEIFLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELY 62
Query: 62 CDIPLGLYVIRGENVVLIGEL-------DLERDELPPHLTHVSVAEIKRVS 105
CD+PLGLYVIRGENVVLIGEL D E+DELP H+T VS AEI++
Sbjct: 63 CDVPLGLYVIRGENVVLIGELVWFWIEQDREKDELPAHMTCVSEAEIRKAE 113
>gi|226509658|ref|NP_001146909.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
gi|195605102|gb|ACG24381.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
Length = 128
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/105 (77%), Positives = 92/105 (87%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSW+ PDD+ LSTSLA +LDKKL+VLLRDGRKL+GTLCSFDQFAN VL+GACERVIVG
Sbjct: 1 MSWSAPDDILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGGQ 60
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCD+PLGLYVIRGENVVLIGELD E+DELP H+T V AEI++
Sbjct: 61 YCDVPLGLYVIRGENVVLIGELDHEKDELPAHMTCVLEAEIRKAE 105
>gi|8778287|gb|AAF79296.1|AC068602_19 F14D16.28 [Arabidopsis thaliana]
Length = 223
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/157 (59%), Positives = 102/157 (64%), Gaps = 31/157 (19%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQF----------------- 43
MSWA PDD++ STSLA+YLDKKLLVLLRDGRKLMG L SFDQF
Sbjct: 58 MSWAAPDDIFFSTSLAAYLDKKLLVLLRDGRKLMGLLRSFDQFGTCLSLLHRKSKVFEMV 117
Query: 44 ------------ANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLERDELPP 91
ANAVLE A ERVIVGDLYCDIPLGLY+IRGENVVLIGELD+E++ELP
Sbjct: 118 LRNVSFVFGFLEANAVLEEAYERVIVGDLYCDIPLGLYIIRGENVVLIGELDVEKEELPA 177
Query: 92 HLTHVSVAEIKRVSALFFSLLFLSLHKRCCLL--TMR 126
H+ V AEIKRVSA L K LL TMR
Sbjct: 178 HMVQVPEAEIKRVSANILLSLAQKAEKEEMLLKGTMR 214
>gi|356560171|ref|XP_003548368.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Glycine
max]
Length = 121
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/85 (89%), Positives = 79/85 (92%)
Query: 21 KKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIG 80
+KLLVLLRDGRKLMGTL SFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIG
Sbjct: 14 EKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIG 73
Query: 81 ELDLERDELPPHLTHVSVAEIKRVS 105
ELDLER+ELP H+T VS AEIKR
Sbjct: 74 ELDLEREELPEHMTRVSTAEIKRAQ 98
>gi|302772304|ref|XP_002969570.1| hypothetical protein SELMODRAFT_146440 [Selaginella moellendorffii]
gi|302774851|ref|XP_002970842.1| hypothetical protein SELMODRAFT_94071 [Selaginella moellendorffii]
gi|300161553|gb|EFJ28168.1| hypothetical protein SELMODRAFT_94071 [Selaginella moellendorffii]
gi|300163046|gb|EFJ29658.1| hypothetical protein SELMODRAFT_146440 [Selaginella moellendorffii]
Length = 127
Score = 154 bits (390), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/105 (71%), Positives = 86/105 (81%), Gaps = 1/105 (0%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWA PD + +TSLA LDKKLLV+LRDGRKL+GTL SFDQFAN VLE A ER+IVGDL
Sbjct: 1 MSWAAPDSFH-TTSLADNLDKKLLVILRDGRKLVGTLRSFDQFANLVLEKAVERIIVGDL 59
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCD+PLGLY+IRGENVVL+GELD + +LP H+ VS AEIKR
Sbjct: 60 YCDLPLGLYIIRGENVVLVGELDQTKKDLPAHMVLVSAAEIKRAQ 104
>gi|168017010|ref|XP_001761041.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687727|gb|EDQ74108.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 127
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/105 (70%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSW+GPD+ + +TSLA LDKKLLV+LRDGRKL+G L SFDQFAN VLEGA ER+ VG+L
Sbjct: 1 MSWSGPDN-FPATSLADNLDKKLLVILRDGRKLIGVLRSFDQFANVVLEGALERITVGEL 59
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCD+PLGLY+IRGENVVLIGELDLER+ELP + V+ EIK+
Sbjct: 60 YCDLPLGLYIIRGENVVLIGELDLEREELPSFMVRVTPTEIKQAQ 104
>gi|9294633|dbj|BAB02972.1| unnamed protein product [Arabidopsis thaliana]
Length = 118
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/95 (80%), Positives = 81/95 (85%), Gaps = 2/95 (2%)
Query: 15 LASYLDK--KLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIR 72
+ S LD KLLVLLRDGRKLMGTL SFDQFANAVLEGACERVIVG+ YCDIPLGLYVIR
Sbjct: 3 VGSALDDAGKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQYCDIPLGLYVIR 62
Query: 73 GENVVLIGELDLERDELPPHLTHVSVAEIKRVSAL 107
GENVVLIGELD ER+ELPPH+ VS AEIKR +
Sbjct: 63 GENVVLIGELDTEREELPPHMIRVSEAEIKRAQKV 97
>gi|413918441|gb|AFW58373.1| hypothetical protein ZEAMMB73_585309 [Zea mays]
Length = 100
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/82 (84%), Positives = 77/82 (93%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSW+ PDD+ LSTSLA +LDKKL+VLLRDGRKL+GTLCSFDQFAN VL+GACERVIVG+
Sbjct: 1 MSWSAPDDILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQ 60
Query: 61 YCDIPLGLYVIRGENVVLIGEL 82
YCD+PLGLYVIRGENVVLIGEL
Sbjct: 61 YCDVPLGLYVIRGENVVLIGEL 82
>gi|238007068|gb|ACR34569.1| unknown [Zea mays]
gi|414587040|tpg|DAA37611.1| TPA: hypothetical protein ZEAMMB73_983155 [Zea mays]
Length = 102
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/82 (84%), Positives = 77/82 (93%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSW+ PDD+ LSTSLA +LDKKL+VLLRDGRKL+GTLCSFDQFAN VL+GACERVIVG+
Sbjct: 1 MSWSAPDDILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQ 60
Query: 61 YCDIPLGLYVIRGENVVLIGEL 82
YCD+PLGLYVIRGENVVLIGEL
Sbjct: 61 YCDVPLGLYVIRGENVVLIGEL 82
>gi|168038612|ref|XP_001771794.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676925|gb|EDQ63402.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 127
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/105 (67%), Positives = 86/105 (81%), Gaps = 1/105 (0%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWAG D+ + +TSLA LDKKLLV+LRDG+K++G L SFDQFAN VLEGA ER+ VG+L
Sbjct: 1 MSWAGLDN-FPATSLADNLDKKLLVILRDGKKIIGILRSFDQFANVVLEGALERITVGEL 59
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCD+PLGLY+IRGENVVLIGELDL R+ELP + V+ EIK+
Sbjct: 60 YCDLPLGLYIIRGENVVLIGELDLGREELPSFMVRVTPTEIKQAQ 104
>gi|413918440|gb|AFW58372.1| hypothetical protein ZEAMMB73_585309, partial [Zea mays]
Length = 147
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 80/91 (87%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
LA+ +KL+VLLRDGRKL+GTLCSFDQFAN VL+GACERVIVG+ YCD+PLGLYVIRGE
Sbjct: 34 LAAATAEKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQYCDVPLGLYVIRGE 93
Query: 75 NVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
NVVLIGELD E+DELP H+T VS AEI++
Sbjct: 94 NVVLIGELDREKDELPAHMTCVSEAEIRKAE 124
>gi|388521873|gb|AFK48998.1| unknown [Lotus japonicus]
Length = 80
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/73 (95%), Positives = 72/73 (98%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWAGP+D+YLSTSLASYLDKKLLVLLRDGRKLMGTL SFDQFANAVLEGACERVIVGDL
Sbjct: 1 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60
Query: 61 YCDIPLGLYVIRG 73
YCDIPLGLYVIRG
Sbjct: 61 YCDIPLGLYVIRG 73
>gi|226497340|ref|NP_001146445.1| uncharacterized protein LOC100280029 [Zea mays]
gi|219887259|gb|ACL54004.1| unknown [Zea mays]
gi|223975439|gb|ACN31907.1| unknown [Zea mays]
gi|413918444|gb|AFW58376.1| hypothetical protein ZEAMMB73_585309 [Zea mays]
Length = 168
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/85 (78%), Positives = 77/85 (90%)
Query: 21 KKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIG 80
+KL+VLLRDGRKL+GTLCSFDQFAN VL+GACERVIVG+ YCD+PLGLYVIRGENVVLIG
Sbjct: 61 EKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQYCDVPLGLYVIRGENVVLIG 120
Query: 81 ELDLERDELPPHLTHVSVAEIKRVS 105
ELD E+DELP H+T VS AEI++
Sbjct: 121 ELDREKDELPAHMTCVSEAEIRKAE 145
>gi|388508020|gb|AFK42076.1| unknown [Medicago truncatula]
Length = 99
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/78 (82%), Positives = 69/78 (88%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSWA PD++ LSTSLA+YLDKKLLVLLRDGRKL+G L SFDQFAN VLEGACERVIVGDL
Sbjct: 1 MSWAAPDELLLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL 60
Query: 61 YCDIPLGLYVIRGENVVL 78
YCD+PLGLYVIRG L
Sbjct: 61 YCDVPLGLYVIRGGECCL 78
>gi|302838708|ref|XP_002950912.1| hypothetical protein VOLCADRAFT_109782 [Volvox carteri f.
nagariensis]
gi|300264029|gb|EFJ48227.1| hypothetical protein VOLCADRAFT_109782 [Volvox carteri f.
nagariensis]
Length = 127
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
T+LA LD++LL++LRDGRK++G L SFDQFAN V+EGA ER+IVGD Y DIPLGL VI
Sbjct: 12 GTALAEELDQRLLIVLRDGRKVLGVLRSFDQFANLVIEGAVERIIVGDQYGDIPLGLQVI 71
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEIK 102
RGENVVL+G +D E+D P LT VS A IK
Sbjct: 72 RGENVVLLGRVDEEKD-APEGLTQVSPAAIK 101
>gi|195606938|gb|ACG25299.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
gi|413918443|gb|AFW58375.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
Length = 105
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 70/105 (66%), Gaps = 23/105 (21%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MSW+ PDD+ LSTSLA +LD N VL+GACERVIVG+
Sbjct: 1 MSWSAPDDILLSTSLAGFLD-----------------------TNVVLQGACERVIVGEQ 37
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
YCD+PLGLYVIRGENVVLIGELD E+DELP H+T VS AEI++
Sbjct: 38 YCDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVSEAEIRKAE 82
>gi|159469406|ref|XP_001692854.1| Sm protein LSm1 [Chlamydomonas reinhardtii]
gi|158277656|gb|EDP03423.1| Sm protein LSm1 [Chlamydomonas reinhardtii]
Length = 126
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
T+LA LD++LLV+LRDGRKL+GTL SFDQFAN V+EGA ER+IVG+ + DIP+GL +I
Sbjct: 11 GTALAEELDQRLLVVLRDGRKLLGTLRSFDQFANLVIEGAVERIIVGEQFGDIPMGLQII 70
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
R ENVVL+G +D E + P LT + A+IK
Sbjct: 71 RAENVVLLGRVD-EAIDAPEGLTRIPAAQIKEAQ 103
>gi|384249031|gb|EIE22514.1| hypothetical protein COCSUDRAFT_83471 [Coccomyxa subellipsoidea
C-169]
Length = 125
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 72/95 (75%), Gaps = 3/95 (3%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+L LDK+LLV LRDGRK++G L SFDQFAN VLEGA ER+IVG LY + PLGLYV+
Sbjct: 10 GAALVEELDKRLLVQLRDGRKIVGILRSFDQFANLVLEGAVERIIVGILYAEDPLGLYVV 69
Query: 72 RGENVVLIGELDLERDELPPH-LTHVSVAEIKRVS 105
RGENVVL+G++D D PP L VS+AEI+++
Sbjct: 70 RGENVVLLGDIDASHD--PPAILQKVSLAEIRQIQ 102
>gi|255079102|ref|XP_002503131.1| like-sm protein [Micromonas sp. RCC299]
gi|226518397|gb|ACO64389.1| like-sm protein [Micromonas sp. RCC299]
Length = 127
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIR 72
SL LDKK+LV+LRDG K++G L SFDQFAN VLE ACER+IVG + DIPLGLY++R
Sbjct: 15 ASLVEELDKKILVVLRDGSKIIGFLRSFDQFANIVLENACERIIVGTSFSDIPLGLYIVR 74
Query: 73 GENVVLIGELDLERDELPPHLTHVSVAEIKR 103
GENVVL+G++D + LT VS EIKR
Sbjct: 75 GENVVLMGDIDETIE--TEGLTEVSNEEIKR 103
>gi|307109206|gb|EFN57444.1| hypothetical protein CHLNCDRAFT_21126 [Chlorella variabilis]
Length = 112
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 27 LRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLER 86
LRDGRK++GTLCSFDQFAN VL GA ER+IVG Y +IPLGL+V+RGENVVL+G+LD R
Sbjct: 12 LRDGRKIIGTLCSFDQFANLVLSGAKERIIVGQQYSEIPLGLHVVRGENVVLLGQLDAAR 71
Query: 87 DELPPHLTHVSVAEIKRVS 105
E PP L V+ A IK+
Sbjct: 72 -EPPPGLELVTEAAIKQAQ 89
>gi|320169252|gb|EFW46151.1| LSM1 protein [Capsaspora owczarzaki ATCC 30864]
Length = 137
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL LDKKL+V+LRDGRKL+G L SFDQFAN VL+ ER+ VGD Y DIP G+++I
Sbjct: 9 SASLLEELDKKLMVVLRDGRKLIGFLRSFDQFANLVLQDTIERIYVGDAYGDIPRGIFLI 68
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DL++D L + V EI
Sbjct: 69 RGENVVLLGEIDLQKD-AQTTLRQLPVEEI 97
>gi|134056432|emb|CAL00599.1| unnamed protein product [Aspergillus niger]
Length = 143
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L DKKL+++LRDGRKL+G L S+DQFAN VL+ ER+ G+LY DIP G++++
Sbjct: 16 AAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFLV 75
Query: 72 RGENVVLIGELDLER-DELPPHLTHVSVAEI 101
RGENV+L+GE+DL++ D++PPH+ S E+
Sbjct: 76 RGENVLLLGEIDLDKEDDIPPHIQRASFQEV 106
>gi|71001662|ref|XP_755512.1| small nuclear ribonucleoprotein (LSM1) [Aspergillus fumigatus
Af293]
gi|66853150|gb|EAL93474.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
fumigatus Af293]
gi|159129580|gb|EDP54694.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
fumigatus A1163]
Length = 177
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L DKKL+++LRDGRKL+G L S+DQFAN VL+ ER+ G+LY DIP G++++
Sbjct: 50 AAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFLV 109
Query: 72 RGENVVLIGELDLER-DELPPHLTHVSVAEI 101
RGENV+L+GE+DL++ D++PPHL E+
Sbjct: 110 RGENVLLLGEIDLDKEDDIPPHLQKAPFQEV 140
>gi|119481233|ref|XP_001260645.1| small nuclear ribonucleoprotein (LSM1), putative [Neosartorya
fischeri NRRL 181]
gi|119408799|gb|EAW18748.1| small nuclear ribonucleoprotein (LSM1), putative [Neosartorya
fischeri NRRL 181]
Length = 177
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L DKKL+++LRDGRKL+G L S+DQFAN VL+ ER+ G+LY DIP G++++
Sbjct: 50 AAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFLV 109
Query: 72 RGENVVLIGELDLER-DELPPHLTHVSVAEI 101
RGENV+L+GE+DL++ D++PPHL E+
Sbjct: 110 RGENVLLLGEIDLDKEDDIPPHLQKAPFQEV 140
>gi|317026774|ref|XP_001399521.2| small nuclear ribonucleoprotein (LSM1) [Aspergillus niger CBS
513.88]
gi|350634459|gb|EHA22821.1| hypothetical protein ASPNIDRAFT_174735 [Aspergillus niger ATCC
1015]
gi|358365679|dbj|GAA82301.1| small nuclear ribonucleoprotein [Aspergillus kawachii IFO 4308]
Length = 174
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L DKKL+++LRDGRKL+G L S+DQFAN VL+ ER+ G+LY DIP G++++
Sbjct: 47 AAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFLV 106
Query: 72 RGENVVLIGELDLER-DELPPHLTHVSVAEI 101
RGENV+L+GE+DL++ D++PPH+ S E+
Sbjct: 107 RGENVLLLGEIDLDKEDDIPPHIQRASFQEV 137
>gi|255946201|ref|XP_002563868.1| Pc20g13900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588603|emb|CAP86719.1| Pc20g13900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 177
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 73/118 (61%), Gaps = 8/118 (6%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L DKKL+++LRDGRKL+G L S+DQFAN V + ERV G LY D+P G++++
Sbjct: 50 AAQLLDLTDKKLVLILRDGRKLIGVLRSWDQFANLVFQDTVERVYAGQLYADVPRGIFIV 109
Query: 72 RGENVVLIGELDLER-DELPPHLTHVSVAEIKRVSALFFSLLFLSLHKRCCLLTMRYE 128
RGENV+L+GE+DL+R D++PP LT E+ F L KR RY+
Sbjct: 110 RGENVLLLGEVDLDREDDIPPTLTRAPFEEV-------FELKKKEDAKRKTGDKKRYD 160
>gi|303283710|ref|XP_003061146.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457497|gb|EEH54796.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 103
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Query: 22 KLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGE 81
KLLVLLRDG K++GTL SFDQFAN VLEGA ER+IV Y DIPLGLY++RGENVVL+G
Sbjct: 1 KLLVLLRDGSKILGTLRSFDQFANIVLEGAVERIIVNKSYSDIPLGLYIVRGENVVLMGG 60
Query: 82 LDLERDELPPHLTHVSVAEIK 102
+D ++ LT VS EIK
Sbjct: 61 VDESKE--TEGLTMVSNDEIK 79
>gi|145352933|ref|XP_001420788.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581023|gb|ABO99081.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 126
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIR 72
SL LDK+LLV LRDG ++GTL SFDQFAN VLE A ER+IVG ++ DIPLGLY++R
Sbjct: 11 ASLVENLDKRLLVALRDGSNIIGTLRSFDQFANIVLESAVERIIVGKMFSDIPLGLYIVR 70
Query: 73 GENVVLIGELDLERD-ELPPHLTHVSVAEIKRV 104
GENVVL+G++ D + L V AEI R
Sbjct: 71 GENVVLMGDVGANGDLDGTEGLIEVDNAEIIRA 103
>gi|425774010|gb|EKV12333.1| hypothetical protein PDIG_44610 [Penicillium digitatum PHI26]
gi|425782493|gb|EKV20399.1| hypothetical protein PDIP_16600 [Penicillium digitatum Pd1]
Length = 172
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L DKKL+++LRDGRKL+G L S+DQFAN V + ERV G L+ D+P G++++
Sbjct: 45 AAQLLDLTDKKLVLILRDGRKLIGVLRSWDQFANLVFQDTVERVYAGHLFADVPRGIFIV 104
Query: 72 RGENVVLIGELDLER-DELPPHLTHVSVAEI 101
RGENV+L+GE+DL+R D++PP LT S E+
Sbjct: 105 RGENVLLLGEVDLDREDDIPPTLTRASFEEV 135
>gi|307212313|gb|EFN88119.1| U6 snRNA-associated Sm-like protein LSm1 [Harpegnathos saltator]
Length = 134
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL LDKKL+VLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++++
Sbjct: 7 TASLLEELDKKLMVLLRDGRTLIGYLRSVDQFANIVLHRTIERIHVGKEYGDIPRGIFIV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE++++ P LT V+V +I
Sbjct: 67 RGENVVLLGEIDLEKEKVLP-LTQVTVDDI 95
>gi|424513743|emb|CCO66365.1| U6 snRNA-associated Sm-like protein LSm1 [Bathycoccus prasinos]
Length = 124
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 68/93 (73%), Gaps = 2/93 (2%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIR 72
SL +DKK+LV+LRD ++GTL SFDQFAN VLE A ER+IVG Y D+PLGLY++R
Sbjct: 11 ASLVEDIDKKILVVLRDNSNIVGTLRSFDQFANIVLENAVERMIVGTHYSDVPLGLYIVR 70
Query: 73 GENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
GENVVL+G++D E EL LT V EI+R+
Sbjct: 71 GENVVLMGDVD-EAIELKG-LTWVENDEIRRMK 101
>gi|115383876|ref|XP_001208485.1| hypothetical protein ATEG_01120 [Aspergillus terreus NIH2624]
gi|114196177|gb|EAU37877.1| hypothetical protein ATEG_01120 [Aspergillus terreus NIH2624]
Length = 171
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L DKKL+++LRDGRKL+G L S+DQFAN VL+ ER+ G+LY DIP G++++
Sbjct: 44 AAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERMYAGNLYADIPRGIFLV 103
Query: 72 RGENVVLIGELDLER-DELPPHLTHVSVAEI 101
RGENV+L+GE+DL++ D++P H+ S E+
Sbjct: 104 RGENVLLLGEIDLDKEDDIPSHVQKASFQEV 134
>gi|66814660|ref|XP_641509.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|74856091|sp|Q54W83.1|LSM1_DICDI RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm1
gi|60469541|gb|EAL67532.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 129
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 68/97 (70%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
+S+ L +DKKL+V+LRDGRK +G + +FDQFAN VL+ ER+ VGD Y D LGL+
Sbjct: 1 MSSGLGDEVDKKLIVVLRDGRKFIGIMRTFDQFANIVLQDTIERIYVGDCYSDKNLGLFF 60
Query: 71 IRGENVVLIGELDLERDELPPHLTHVSVAEIKRVSAL 107
IRG+NVV++GE+D +++ L +S EI + +AL
Sbjct: 61 IRGDNVVILGEIDPDKEVQEKKLKKISWDEITKAAAL 97
>gi|332018346|gb|EGI58951.1| U6 snRNA-associated Sm-like protein LSm1 [Acromyrmex echinatior]
Length = 138
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL L+KKL+VLLRDGR L+G L S DQFAN VL+ ER+ VG Y DIP G++++
Sbjct: 11 TASLLEELEKKLMVLLRDGRTLIGYLKSVDQFANIVLQSTIERIHVGQEYGDIPRGIFIV 70
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D+E++++ P L V+V EI
Sbjct: 71 RGENVVLLGEIDIEKEKVLP-LKKVTVDEI 99
>gi|322779353|gb|EFZ09609.1| hypothetical protein SINV_06406 [Solenopsis invicta]
Length = 138
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL L+KKL+VLLRDGR L+G L S DQFAN VL+ ER+ VG Y DIP G++++
Sbjct: 11 TASLLEELEKKLMVLLRDGRTLIGYLKSVDQFANIVLQSTIERIHVGQEYGDIPRGIFIV 70
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D+E++++ P L V+V EI
Sbjct: 71 RGENVVLLGEIDIEKEKVLP-LKKVTVDEI 99
>gi|307172327|gb|EFN63815.1| U6 snRNA-associated Sm-like protein LSm1 [Camponotus floridanus]
Length = 138
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL L+KKL+VLLRDGR L+G L S DQFAN VL+ ER+ VG Y DIP G++++
Sbjct: 11 TASLLEELEKKLMVLLRDGRTLIGYLKSVDQFANIVLQSTIERIHVGQEYGDIPRGIFIV 70
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D+E++++ P L V+V EI
Sbjct: 71 RGENVVLLGEIDIEKEKVLP-LKKVTVDEI 99
>gi|242810005|ref|XP_002485492.1| small nuclear ribonucleoprotein (LSM1), putative [Talaromyces
stipitatus ATCC 10500]
gi|218716117|gb|EED15539.1| small nuclear ribonucleoprotein (LSM1), putative [Talaromyces
stipitatus ATCC 10500]
Length = 166
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L DKKL+++LRDGRKL+G L S+DQFAN VL+ ER+ G+LY + +GLY++
Sbjct: 39 AAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTVERIYAGNLYAEEHVGLYLV 98
Query: 72 RGENVVLIGELDLER-DELPPHLTHVSVAEIKRVSA 106
RGENV+L+GE+DL++ D+LP L SV E++ + A
Sbjct: 99 RGENVLLLGEIDLDKEDDLPESLNQASVKEVRELKA 134
>gi|156391102|ref|XP_001635608.1| predicted protein [Nematostella vectensis]
gi|156222703|gb|EDO43545.1| predicted protein [Nematostella vectensis]
Length = 138
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKKLLVLLRDGR L+G L S DQFAN VL+ ER+ VGD Y DIP G++++
Sbjct: 7 TASLIKEIDKKLLVLLRDGRTLIGYLRSIDQFANLVLQETIERIYVGDRYGDIPRGIFLV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGEN+VL+GE+D ++ E+ L VSV EI
Sbjct: 67 RGENLVLLGEIDQDK-EVQSKLQEVSVDEI 95
>gi|384494127|gb|EIE84618.1| hypothetical protein RO3G_09328 [Rhizopus delemar RA 99-880]
Length = 125
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
ST L +DKKL+V+LRDGRKL+G L SFDQFAN VL+ ER+ V Y DIP G+++I
Sbjct: 12 STGLIDSIDKKLMVVLRDGRKLIGILRSFDQFANLVLQDTIERIYVRGCYGDIPRGVFLI 71
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D+++++ +L VSV EI
Sbjct: 72 RGENVVLLGEIDVDKED-QINLRQVSVEEI 100
>gi|327284091|ref|XP_003226772.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Anolis
carolinensis]
Length = 133
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIQDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 67 RGENVVLLGEIDLEKESDTP-LQQVSIEEI 95
>gi|350539892|ref|NP_001232304.1| putative U6 snRNA-associated Sm-like protein LSm1 variant 1
[Taeniopygia guttata]
gi|197128059|gb|ACH44557.1| putative U6 snRNA-associated Sm-like protein LSm1 variant 1
[Taeniopygia guttata]
gi|197128060|gb|ACH44558.1| putative U6 snRNA-associated Sm-like protein LSm1 variant 1
[Taeniopygia guttata]
gi|197128061|gb|ACH44559.1| putative U6 snRNA-associated Sm-like protein LSm1 variant 1
[Taeniopygia guttata]
Length = 133
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIQDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 67 RGENVVLLGEIDLEKESDTP-LQQVSIEEI 95
>gi|126303350|ref|XP_001372820.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like
[Monodelphis domestica]
gi|395507426|ref|XP_003758025.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Sarcophilus
harrisii]
Length = 133
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIEDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 67 RGENVVLLGEIDLEKESDTP-LQQVSIEEI 95
>gi|62988318|ref|NP_001017952.1| U6 snRNA-associated Sm-like protein LSm1 [Bos taurus]
gi|296222011|ref|XP_002757005.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Callithrix
jacchus]
gi|75057871|sp|Q5E9Z8.1|LSM1_BOVIN RecName: Full=U6 snRNA-associated Sm-like protein LSm1
gi|59857841|gb|AAX08755.1| Lsm1 protein [Bos taurus]
gi|59857907|gb|AAX08788.1| Lsm1 protein [Bos taurus]
gi|59857923|gb|AAX08796.1| Lsm1 protein [Bos taurus]
gi|296472336|tpg|DAA14451.1| TPA: U6 snRNA-associated Sm-like protein LSm1 [Bos taurus]
Length = 133
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 67 RGENVVLLGEIDLEKESDTP-LQQVSIEEI 95
>gi|432099963|gb|ELK28857.1| U6 snRNA-associated Sm-like protein LSm1 [Myotis davidii]
Length = 133
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 67 RGENVVLLGEIDLEKESDTP-LQQVSIEEI 95
>gi|110625667|ref|NP_080308.1| U6 snRNA-associated Sm-like protein LSm1 [Mus musculus]
gi|20177947|sp|Q8VC85.1|LSM1_MOUSE RecName: Full=U6 snRNA-associated Sm-like protein LSm1
gi|18204794|gb|AAH21460.1| LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Mus
musculus]
gi|26334347|dbj|BAC30891.1| unnamed protein product [Mus musculus]
gi|148700874|gb|EDL32821.1| mCG14522 [Mus musculus]
Length = 133
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 67 RGENVVLLGEIDLEKESDTP-LQQVSIEEI 95
>gi|7657313|ref|NP_055277.1| U6 snRNA-associated Sm-like protein LSm1 [Homo sapiens]
gi|114619705|ref|XP_001170479.1| PREDICTED: uncharacterized protein LOC746776 [Pan troglodytes]
gi|291409096|ref|XP_002720830.1| PREDICTED: Lsm1 protein [Oryctolagus cuniculus]
gi|301763723|ref|XP_002917277.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like
[Ailuropoda melanoleuca]
gi|332240911|ref|XP_003269631.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Nomascus
leucogenys]
gi|344281630|ref|XP_003412581.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Loxodonta
africana]
gi|345781536|ref|XP_532806.3| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Canis lupus
familiaris]
gi|348554227|ref|XP_003462927.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Cavia
porcellus]
gi|395847347|ref|XP_003796340.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Otolemur
garnettii]
gi|397521395|ref|XP_003830782.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Pan paniscus]
gi|402878015|ref|XP_003902702.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Papio anubis]
gi|410956402|ref|XP_003984831.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Felis catus]
gi|426256398|ref|XP_004021827.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Ovis aries]
gi|426359374|ref|XP_004046951.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Gorilla
gorilla gorilla]
gi|20177943|sp|O15116.1|LSM1_HUMAN RecName: Full=U6 snRNA-associated Sm-like protein LSm1; AltName:
Full=Cancer-associated Sm-like; AltName: Full=Small
nuclear ribonuclear CaSm
gi|2232057|gb|AAB62189.1| CaSm [Homo sapiens]
gi|5262854|emb|CAB45865.1| Lsm1 protein [Homo sapiens]
gi|12804683|gb|AAH01767.1| LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Homo
sapiens]
gi|119583736|gb|EAW63332.1| LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Homo sapiens]
gi|189053287|dbj|BAG35093.1| unnamed protein product [Homo sapiens]
gi|261859266|dbj|BAI46155.1| U6 snRNA-associated Sm-like protein LSm1 [synthetic construct]
gi|351699797|gb|EHB02716.1| U6 snRNA-associated Sm-like protein LSm1 [Heterocephalus glaber]
gi|355697873|gb|EHH28421.1| Cancer-associated Sm-like protein [Macaca mulatta]
gi|355779633|gb|EHH64109.1| Cancer-associated Sm-like protein [Macaca fascicularis]
gi|380811796|gb|AFE77773.1| U6 snRNA-associated Sm-like protein LSm1 [Macaca mulatta]
gi|383412789|gb|AFH29608.1| U6 snRNA-associated Sm-like protein LSm1 [Macaca mulatta]
gi|384943820|gb|AFI35515.1| U6 snRNA-associated Sm-like protein LSm1 [Macaca mulatta]
gi|410210930|gb|JAA02684.1| LSM1 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410252368|gb|JAA14151.1| LSM1 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410293390|gb|JAA25295.1| LSM1 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410336323|gb|JAA37108.1| LSM1 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|431902255|gb|ELK08756.1| U6 snRNA-associated Sm-like protein LSm1 [Pteropus alecto]
Length = 133
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 67 RGENVVLLGEIDLEKESDTP-LQQVSIEEI 95
>gi|148227316|ref|NP_001090109.1| uncharacterized protein LOC735185 [Xenopus laevis]
gi|76779739|gb|AAI06458.1| MGC131170 protein [Xenopus laevis]
Length = 133
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIEDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 67 RGENVVLLGEIDLEKENDTP-LHQVSIEEI 95
>gi|149742575|ref|XP_001493258.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Equus
caballus]
Length = 133
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 67 RGENVVLLGEIDLEKESDTP-LQQVSIEEI 95
>gi|354472085|ref|XP_003498271.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like
[Cricetulus griseus]
gi|344238558|gb|EGV94661.1| U6 snRNA-associated Sm-like protein LSm1 [Cricetulus griseus]
Length = 133
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 67 RGENVVLLGEIDLEKESDTP-LQQVSIEEI 95
>gi|148886747|ref|NP_001092164.1| LSM1 homolog, U6 small nuclear RNA associated [Xenopus laevis]
gi|146327499|gb|AAI41744.1| LOC100049754 protein [Xenopus laevis]
Length = 133
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIEDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 67 RGENVVLLGEIDLEKESDTP-LHQVSIEEI 95
>gi|343429796|emb|CBQ73368.1| related to LSM1-Sm-like (Lsm) protein [Sporisorium reilianum
SRZ2]
Length = 148
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL +DKK+LV+LRDG+KL+G L S+DQFAN VL+ ERV VG+ Y DI G++++
Sbjct: 15 SGSLVDCVDKKMLVVLRDGKKLIGVLRSYDQFANLVLQDTVERVFVGNRYGDIARGVFLV 74
Query: 72 RGENVVLIGELDLE-RDELPPHLT 94
RGENVVL+GE+DL+ DE+PP +
Sbjct: 75 RGENVVLMGEIDLDAEDEVPPSIA 98
>gi|443898710|dbj|GAC76044.1| UDP-glucose pyrophosphorylase [Pseudozyma antarctica T-34]
Length = 148
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL +DKK+LV+LRDG+KL+G L S+DQFAN VL+ ERV VG+ Y DI G++++
Sbjct: 15 SGSLVDCVDKKMLVVLRDGKKLIGVLRSYDQFANLVLQDTVERVFVGNRYGDIARGVFLV 74
Query: 72 RGENVVLIGELDLE-RDELPPHLT 94
RGENVVL+GE+DL+ DE+PP +
Sbjct: 75 RGENVVLMGEIDLDAEDEVPPSIA 98
>gi|164657750|ref|XP_001730001.1| hypothetical protein MGL_2987 [Malassezia globosa CBS 7966]
gi|159103895|gb|EDP42787.1| hypothetical protein MGL_2987 [Malassezia globosa CBS 7966]
Length = 147
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 63/80 (78%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S +L +DK+++V+LRDGRKL+G L S+DQFAN VL+ A ER+ +G Y D+P G +++
Sbjct: 15 SGALVDLVDKRVIVVLRDGRKLLGVLRSYDQFANLVLQDAVERIFLGHRYGDVPKGTFIV 74
Query: 72 RGENVVLIGELDLERDELPP 91
RGENVVL+GE+DLE++E P
Sbjct: 75 RGENVVLMGEIDLEKEENIP 94
>gi|226372840|gb|ACO52045.1| U6 snRNA-associated Sm-like protein LSm1 [Rana catesbeiana]
Length = 133
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIEDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 67 RGENVVLLGEIDLEKESDTP-LLQVSIEEI 95
>gi|82571526|gb|AAI10195.1| LSM1 protein [Bos taurus]
Length = 95
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 67 RGENVVLLGEIDLEKESDTP-LQQVSIEEI 95
>gi|212537161|ref|XP_002148736.1| small nuclear ribonucleoprotein (LSM1), putative [Talaromyces
marneffei ATCC 18224]
gi|210068478|gb|EEA22569.1| small nuclear ribonucleoprotein (LSM1), putative [Talaromyces
marneffei ATCC 18224]
Length = 169
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L DKKL+++LRDGRKL+G L S+DQFAN VL+ ER+ G+LY + +GLY++
Sbjct: 42 AAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTVERIYAGNLYAEEHVGLYLV 101
Query: 72 RGENVVLIGELDLER-DELPPHLTHVSVAEIK 102
RGENV+L+GE+DL++ D+LP LT S+ E++
Sbjct: 102 RGENVLLLGEIDLDKEDDLPETLTQTSMKEVR 133
>gi|157820263|ref|NP_001102346.1| U6 snRNA-associated Sm-like protein LSm1 [Rattus norvegicus]
gi|149057826|gb|EDM09069.1| LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted) [Rattus norvegicus]
Length = 133
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGRKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 67 RGENVVLLGEIDLEKESDTP-LQQVSIEEI 95
>gi|91093274|ref|XP_971370.1| PREDICTED: similar to LSM1-like protein [Tribolium castaneum]
gi|270016827|gb|EFA13273.1| hypothetical protein TcasGA2_TC001544 [Tribolium castaneum]
Length = 136
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L LDKKL+VLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++++
Sbjct: 9 TAHLLDELDKKLMVLLRDGRTLIGYLRSVDQFANLVLHHTIERIHVGKEYGDIPRGVFIV 68
Query: 72 RGENVVLIGELDLERD-ELPPHLTHVSVAEI 101
RGENVVL+GE+D E++ ELP LT VSV EI
Sbjct: 69 RGENVVLLGEIDAEKEAELP--LTEVSVDEI 97
>gi|71017769|ref|XP_759115.1| hypothetical protein UM02968.1 [Ustilago maydis 521]
gi|46098907|gb|EAK84140.1| hypothetical protein UM02968.1 [Ustilago maydis 521]
Length = 148
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL +DKK+LV+LRDG+KL+G L S+DQFAN VL+ ERV VG+ Y D+ G++++
Sbjct: 15 SGSLVDCVDKKMLVVLRDGKKLIGVLRSYDQFANLVLQDTVERVFVGNRYGDVARGIFLV 74
Query: 72 RGENVVLIGELDLE-RDELPPHLT 94
RGENVVL+GE+DL+ DE+PP +
Sbjct: 75 RGENVVLMGEIDLDAEDEVPPSIA 98
>gi|58332084|ref|NP_001011191.1| LSM1 homolog, U6 small nuclear RNA associated [Xenopus (Silurana)
tropicalis]
gi|56268999|gb|AAH87559.1| LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Xenopus (Silurana) tropicalis]
Length = 133
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIEDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 67 RGENVVLLGEIDLEKESDTP-LLQVSIEEI 95
>gi|430813865|emb|CCJ28830.1| unnamed protein product [Pneumocystis jirovecii]
Length = 129
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 62/76 (81%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIR 72
T L S LDKKL+V+LRDG+KL+G L SFDQ+AN VL+G ER+ V +Y DIP G+++IR
Sbjct: 14 TLLHSCLDKKLMVILRDGKKLIGILRSFDQYANLVLQGTVERIYVDQVYGDIPRGVFIIR 73
Query: 73 GENVVLIGELDLERDE 88
GENVVL+GE+DL++ +
Sbjct: 74 GENVVLVGEIDLDKKD 89
>gi|388853835|emb|CCF52556.1| related to LSM1-Sm-like (Lsm) protein [Ustilago hordei]
Length = 148
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL +DKK+LV+LRDG+KL+G L S+DQFAN VL+ ERV VG+ Y DI G++++
Sbjct: 15 SGSLVDCVDKKMLVVLRDGKKLIGVLRSYDQFANLVLQDTVERVFVGNRYGDIVRGVFLV 74
Query: 72 RGENVVLIGELDLE-RDELPPHLT 94
RGENVVL+GE+DL+ DE+PP +
Sbjct: 75 RGENVVLMGEIDLDAEDEVPPSIA 98
>gi|405961598|gb|EKC27377.1| U6 snRNA-associated Sm-like protein LSm1 [Crassostrea gigas]
Length = 133
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKKLLV+LRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLVEEIDKKLLVVLRDGRTLIGYLRSIDQFANLVLHRTIERIHVGKKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE +E P L V + +I
Sbjct: 67 RGENVVLLGEIDLE-NENNPQLEEVPIDDI 95
>gi|330842218|ref|XP_003293079.1| hypothetical protein DICPUDRAFT_157882 [Dictyostelium purpureum]
gi|325076610|gb|EGC30382.1| hypothetical protein DICPUDRAFT_157882 [Dictyostelium purpureum]
Length = 131
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
++ L +DKKL+V+LRDGRK +G + +FDQFAN VL+ ER+ VGD Y D LG++ I
Sbjct: 4 NSGLGDEVDKKLIVVLRDGRKFIGMMRTFDQFANIVLQDTIERIYVGDCYSDKNLGVFFI 63
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEIKRVSA 106
RG+NVV++GE+D +R+ L VS EI + +A
Sbjct: 64 RGDNVVILGEIDPDREVQEKKLKKVSWDEITKAAA 98
>gi|417408540|gb|JAA50816.1| Putative small nuclear ribonucleoprotein splicing factor, partial
[Desmodus rotundus]
Length = 195
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 69 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 128
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 129 RGENVVLLGEIDLEKESDTP-LQQVSIEEI 157
>gi|291228074|ref|XP_002734007.1| PREDICTED: Lsm1 protein-like [Saccoglossus kowalevskii]
Length = 134
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKKLLV+LRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIQEIDKKLLVVLRDGRTLIGYLRSIDQFANLVLHRTIERIHVGKEYGDIPRGVFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE + P L VS+ EI
Sbjct: 67 RGENVVLLGEIDLENEGKIP-LKEVSIDEI 95
>gi|452988559|gb|EME88314.1| hypothetical protein MYCFIDRAFT_126773 [Pseudocercospora fijiensis
CIRAD86]
Length = 144
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 69/103 (66%), Gaps = 3/103 (2%)
Query: 1 MSWAGPDDVYLSTSLASYLD---KKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
+ W + T+ A LD KKL+V+LRDGRKL+G L S+DQF N VL+ ER+ V
Sbjct: 3 LDWTDEQQPQMFTTAAQLLDLTDKKLMVVLRDGRKLIGVLRSWDQFGNLVLQDTIERLFV 62
Query: 58 GDLYCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAE 100
DLY DI GL+++RGENV+++GE+DL++D+ P ++ AE
Sbjct: 63 HDLYADIERGLFLVRGENVLILGEIDLDKDDYIPEPYQLAPAE 105
>gi|19112312|ref|NP_595520.1| mRNA decapping complex subunit (predicted) [Schizosaccharomyces
pombe 972h-]
gi|3287944|sp|P87173.1|LSM1_SCHPO RecName: Full=U6 snRNA-associated Sm-like protein LSm1
gi|2117304|emb|CAB09117.1| mRNA decapping complex subunit (predicted) [Schizosaccharomyces
pombe]
Length = 140
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 71/95 (74%), Gaps = 7/95 (7%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL Y+D+K++V+LRDG+KL+G L SFDQFAN +L+ ER+ V D+Y DI G+Y++
Sbjct: 13 SGSLVDYVDRKVIVVLRDGKKLIGILRSFDQFANLMLQYTIERIYVDDMYGDIDRGVYIV 72
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEIKRVSA 106
RGENVVL+GELDL+++ + +V +++R+ A
Sbjct: 73 RGENVVLLGELDLDKE-------YDAVKQLRRMPA 100
>gi|350593418|ref|XP_003359535.2| PREDICTED: hypothetical protein LOC100627320 [Sus scrofa]
Length = 267
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 141 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 200
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 201 RGENVVLLGEIDLEKESDTP-LQQVSIEEI 229
>gi|197128062|gb|ACH44560.1| putative U6 snRNA-associated Sm-like protein LSm1 variant 1
[Taeniopygia guttata]
Length = 133
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK L LLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIQDIDKKHLGLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 67 RGENVVLLGEIDLEKERDTP-LQQVSIEEI 95
>gi|66770685|gb|AAY54654.1| IP04948p [Drosophila melanogaster]
Length = 137
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L +DKKL+VLLRDGR L+G L S DQFAN VL+ ER+ VG+ Y DIP G+++I
Sbjct: 10 TAHLLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFII 69
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D E+++ P L +SV EI
Sbjct: 70 RGENVVLLGEIDREKEQKLP-LKEISVDEI 98
>gi|125811580|ref|XP_001361929.1| GA18077 [Drosophila pseudoobscura pseudoobscura]
gi|195170162|ref|XP_002025882.1| GL10169 [Drosophila persimilis]
gi|54637105|gb|EAL26508.1| GA18077 [Drosophila pseudoobscura pseudoobscura]
gi|194110746|gb|EDW32789.1| GL10169 [Drosophila persimilis]
Length = 137
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L +DKKL+VLLRDGR L+G L S DQFAN VL+ ER+ VG+ Y DIP G+++I
Sbjct: 10 TAHLLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNQYGDIPRGVFII 69
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D E+++ P L +SV EI
Sbjct: 70 RGENVVLLGEIDREKEQKLP-LKEISVDEI 98
>gi|194881822|ref|XP_001975020.1| GG20797 [Drosophila erecta]
gi|190658207|gb|EDV55420.1| GG20797 [Drosophila erecta]
Length = 137
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L +DKKL+VLLRDGR L+G L S DQFAN VL+ ER+ VG+ Y DIP G+++I
Sbjct: 10 TAHLLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFII 69
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D E+++ P L VSV EI
Sbjct: 70 RGENVVLLGEIDREKEQKLP-LKEVSVDEI 98
>gi|290562435|gb|ADD38614.1| U6 snRNA-associated Sm-like protein LSm1 [Lepeophtheirus salmonis]
Length = 138
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Query: 8 DVYL--STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP 65
D YL + S+ LDKKL+VLLRDGR L+G L S DQ+AN VL A ER+ VG+ Y DIP
Sbjct: 3 DHYLPGTASIMEELDKKLMVLLRDGRTLIGILRSVDQYANLVLHRAIERIHVGNDYGDIP 62
Query: 66 LGLYVIRGENVVLIGELDLERD-ELPPHLTHVSVAEI 101
G++V+RGENVVL+GE+D R+ E L VS+ EI
Sbjct: 63 RGIFVVRGENVVLLGEIDEVRESEANSKLREVSLEEI 99
>gi|383861132|ref|XP_003706040.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Megachile
rotundata]
Length = 134
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL LDKKL+VLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++++
Sbjct: 7 TASLLEELDKKLMVLLRDGRTLIGYLRSVDQFANIVLHRTIERIHVGKEYGDIPRGIFIV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D ++++ P LT VSV +I
Sbjct: 67 RGENVVLLGEIDRDKEKDLP-LTEVSVDDI 95
>gi|326932811|ref|XP_003212506.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Meleagris
gallopavo]
Length = 133
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIQDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE+ E L VS+ EI
Sbjct: 67 RGENVVLLGEIDLEK-ESDTLLQQVSIEEI 95
>gi|363742099|ref|XP_424387.3| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Gallus gallus]
Length = 133
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIQDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE+ E L VS+ EI
Sbjct: 67 RGENVVLLGEIDLEK-ESDTLLQQVSIEEI 95
>gi|24656769|ref|NP_611559.1| LSm1 [Drosophila melanogaster]
gi|195346337|ref|XP_002039722.1| GM15742 [Drosophila sechellia]
gi|195486602|ref|XP_002091574.1| GE13737 [Drosophila yakuba]
gi|195585326|ref|XP_002082440.1| GD25220 [Drosophila simulans]
gi|7291257|gb|AAF46688.1| LSm1 [Drosophila melanogaster]
gi|66770707|gb|AAY54665.1| IP04848p [Drosophila melanogaster]
gi|194135071|gb|EDW56587.1| GM15742 [Drosophila sechellia]
gi|194177675|gb|EDW91286.1| GE13737 [Drosophila yakuba]
gi|194194449|gb|EDX08025.1| GD25220 [Drosophila simulans]
gi|220951410|gb|ACL88248.1| CG4279-PA [synthetic construct]
Length = 137
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L +DKKL+VLLRDGR L+G L S DQFAN VL+ ER+ VG+ Y DIP G+++I
Sbjct: 10 TAHLLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFII 69
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D E+++ P L +SV EI
Sbjct: 70 RGENVVLLGEIDREKEQKLP-LKEISVDEI 98
>gi|194754723|ref|XP_001959644.1| GF12971 [Drosophila ananassae]
gi|195123083|ref|XP_002006039.1| GI18766 [Drosophila mojavensis]
gi|190620942|gb|EDV36466.1| GF12971 [Drosophila ananassae]
gi|193911107|gb|EDW09974.1| GI18766 [Drosophila mojavensis]
Length = 137
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L +DKKL+VLLRDGR L+G L S DQFAN VL+ ER+ VG+ Y DIP G+++I
Sbjct: 10 TAHLLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFII 69
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D E+++ P L +SV EI
Sbjct: 70 RGENVVLLGEIDREKEQKLP-LKEISVDEI 98
>gi|238496495|ref|XP_002379483.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
flavus NRRL3357]
gi|317147143|ref|XP_003189890.1| small nuclear ribonucleoprotein (LSM1) [Aspergillus oryzae RIB40]
gi|220694363|gb|EED50707.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
flavus NRRL3357]
Length = 174
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L DKKL+++LRDGRKL+G L S+DQFAN VL+ ER+ G+LY +I G++++
Sbjct: 47 AAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYAEISRGIFLV 106
Query: 72 RGENVVLIGELDLER-DELPPHLTHVSVAEI 101
RGENV+L+GE+DL++ D++PPH+ E+
Sbjct: 107 RGENVLLLGEIDLDKEDDIPPHVQKAPFEEV 137
>gi|66529526|ref|XP_624639.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Apis
mellifera]
gi|340709308|ref|XP_003393252.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Bombus
terrestris]
gi|350425090|ref|XP_003494008.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Bombus
impatiens]
gi|380023316|ref|XP_003695469.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Apis
florea]
Length = 134
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL LDKKL+VLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++++
Sbjct: 7 TASLLEELDKKLMVLLRDGRTLIGYLRSVDQFANIVLHRTIERIHVGKEYGDIPRGIFIV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D +++ P LT VSV +I
Sbjct: 67 RGENVVLLGEIDRDKERDLP-LTEVSVDDI 95
>gi|121715718|ref|XP_001275468.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
clavatus NRRL 1]
gi|119403625|gb|EAW14042.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
clavatus NRRL 1]
Length = 177
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L DKKL+++LRDGRKL+G L S+DQFAN VL+ ER+ G LY +IP G++++
Sbjct: 50 AAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERIYAGGLYAEIPRGIFLV 109
Query: 72 RGENVVLIGELDLER-DELPPHLTHVSVAEI 101
RGENV+L+GE+DL++ D++P H+ E+
Sbjct: 110 RGENVLLLGEIDLDKEDDVPAHVQKAPFPEV 140
>gi|198437342|ref|XP_002124367.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm1
(Cancer-associated Sm-like) (Small nuclear ribonuclear
CaSm) [Ciona intestinalis]
Length = 133
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LV+LRDGR L+G L S DQFAN VL ERV VG +Y DIP G++VI
Sbjct: 7 TASLIEEIDKKQLVMLRDGRILIGYLRSVDQFANLVLHKTVERVHVGSMYGDIPRGIFVI 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D+E +E L VS+ +I
Sbjct: 67 RGENVVLLGEVDIEHEE-RKDLEKVSIEKI 95
>gi|321477585|gb|EFX88543.1| hypothetical protein DAPPUDRAFT_304575 [Daphnia pulex]
Length = 137
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ +L LDKK++V+LRDGR L+G L S DQFAN VL ER+ VG Y DIP G++++
Sbjct: 9 TATLLEDLDKKVIVVLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGKEYGDIPRGVFIV 68
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENV L+GE+DLE++E P L V V EI
Sbjct: 69 RGENVALLGEIDLEKEERIP-LKQVGVEEI 97
>gi|345565028|gb|EGX47984.1| hypothetical protein AOL_s00081g311 [Arthrobotrys oligospora ATCC
24927]
Length = 262
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 80/130 (61%), Gaps = 18/130 (13%)
Query: 20 DKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLI 79
DKKL+++LRDGRKL+GTL S+DQ+AN VL+ ER+ +LY D+P G Y++RGENV+L+
Sbjct: 27 DKKLVIVLRDGRKLIGTLRSYDQYANLVLQDTIERLYSQNLYADVPRGCYIVRGENVLLL 86
Query: 80 GELDLERDELPPHLTHVSVAEI---KRVSALF------------FSLLFLSLHKRCCLLT 124
GE+DL++++ P L +V EI +R + SL F + ++R T
Sbjct: 87 GEIDLDKEDDTP-LKQATVDEIYDAQRAENAYKKQREKKKAKKLHSLGFEAENERVDFKT 145
Query: 125 MR--YEIMGR 132
YEI G+
Sbjct: 146 GELYYEIGGK 155
>gi|195382173|ref|XP_002049805.1| GJ21790 [Drosophila virilis]
gi|194144602|gb|EDW60998.1| GJ21790 [Drosophila virilis]
Length = 137
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L +DKKL+VLLRDGR L+G L S DQFAN VL+ ER+ VG+ Y DIP G+++I
Sbjct: 10 TAHLLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNQYGDIPRGVFII 69
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D ++++ P L +SV EI
Sbjct: 70 RGENVVLLGEIDRDKEQKLP-LKEISVDEI 98
>gi|348673586|gb|EGZ13405.1| hypothetical protein PHYSODRAFT_316685 [Phytophthora sojae]
Length = 122
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 63/83 (75%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
++SL LDK++L++LRDGR L+G L SFDQ++N +LE ER + G L+CDI LGL +I
Sbjct: 8 NSSLIQQLDKQVLMVLRDGRHLVGYLRSFDQYSNIILEDTYERHVAGGLFCDIELGLNII 67
Query: 72 RGENVVLIGELDLERDELPPHLT 94
RG+N+VL+GELD +++ PH+
Sbjct: 68 RGDNIVLLGELDSDKERDQPHMK 90
>gi|148298867|ref|NP_001091827.1| LSM1-like protein [Bombyx mori]
gi|95102704|gb|ABF51290.1| LSM1-like protein [Bombyx mori]
Length = 138
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L LDKKL+VLLRDGR L+G L DQFAN VL ER+ VG Y DIP G++++
Sbjct: 11 TAHLLDELDKKLMVLLRDGRTLIGYLRCVDQFANLVLHKTIERIHVGKEYGDIPRGIFIV 70
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D +++E P LT VSV EI
Sbjct: 71 RGENVVLLGEIDKDKEENLP-LTEVSVDEI 99
>gi|156553084|ref|XP_001600131.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Nasonia
vitripennis]
Length = 134
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL LDKKL+VLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++++
Sbjct: 7 TASLLEELDKKLMVLLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGKEYGDIPRGVFIV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D ++++ P L+ VSV +I
Sbjct: 67 RGENVVLLGEIDKDKEKNLP-LSEVSVDDI 95
>gi|357609556|gb|EHJ66513.1| LSM1-like protein [Danaus plexippus]
Length = 138
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L LDKKL+VLLRDGR L+G L DQFAN VL ER+ VG Y DIP G++++
Sbjct: 11 TAHLLDELDKKLMVLLRDGRTLIGYLRCVDQFANLVLHKTIERIHVGREYGDIPRGIFIV 70
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D E++E P LT VSV +I
Sbjct: 71 RGENVVLLGEIDKEKEENLP-LTEVSVDDI 99
>gi|195429567|ref|XP_002062829.1| GK19486 [Drosophila willistoni]
gi|194158914|gb|EDW73815.1| GK19486 [Drosophila willistoni]
Length = 137
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L +DKKL+VLLRDGR L+G L S DQFAN VL+ ER+ VG+ Y DIP G+++I
Sbjct: 10 TAHLLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFII 69
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D ++++ P L +SV EI
Sbjct: 70 RGENVVLLGEIDRDKEQKLP-LKEISVDEI 98
>gi|290987543|ref|XP_002676482.1| predicted protein [Naegleria gruberi]
gi|284090084|gb|EFC43738.1| predicted protein [Naegleria gruberi]
Length = 150
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 66/96 (68%), Gaps = 3/96 (3%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL+ LDKK++V+LRDG+KL+G L +DQF N LE ER++V D Y D+ +GLY++
Sbjct: 22 AASLSDQLDKKVMVILRDGKKLIGILRCYDQFVNMTLEKTVERIVVEDKYGDLDVGLYIV 81
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEIKRVSAL 107
RGENVVL+GE+D RD L V V EI +S L
Sbjct: 82 RGENVVLMGEVDESRD---LSLKQVPVDEILMLSKL 114
>gi|225713684|gb|ACO12688.1| U6 snRNA-associated Sm-like protein LSm1 [Lepeophtheirus salmonis]
Length = 138
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 67/97 (69%), Gaps = 3/97 (3%)
Query: 8 DVYL--STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP 65
D YL + S+ LDKKL+VLLRDGR L+G L DQ+AN VL A ER+ VG+ Y DIP
Sbjct: 3 DHYLPGTASIMEELDKKLMVLLRDGRTLIGILRPVDQYANLVLHRAIERIHVGNDYGDIP 62
Query: 66 LGLYVIRGENVVLIGELDLERD-ELPPHLTHVSVAEI 101
G++V+RGENVVL+GE+D R+ E L VS+ EI
Sbjct: 63 RGIFVVRGENVVLLGEIDEVRESEANSKLREVSLEEI 99
>gi|387915626|gb|AFK11422.1| u6 snRNA-associated Sm-like protein LSm1-like protein
[Callorhinchus milii]
Length = 133
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LV+LRDGR L+G L S DQFAN VL E + VG Y DIP G++V+
Sbjct: 7 TASLIEDIDKKHLVVLRDGRTLIGYLRSVDQFANLVLHQTVEGIHVGRKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DLER+ P L VS+ EI
Sbjct: 67 RGENVVLLGEIDLERETDTP-LQRVSIEEI 95
>gi|268532098|ref|XP_002631177.1| C. briggsae CBR-LSM-1 protein [Caenorhabditis briggsae]
Length = 125
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Query: 8 DVYL--STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP 65
D YL + SL LDKKLLV+LRDGRKL+G L S DQFAN +LE ER V +C+
Sbjct: 5 DPYLPGAISLFEQLDKKLLVVLRDGRKLIGYLRSIDQFANLILEDVVERTFVEKYFCETG 64
Query: 66 LGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVSALFFSLLFLSLHKRCCLLTM 125
G +IRGENV L GE+D D +P LT VS E +R+ + + KR T
Sbjct: 65 QGFMLIRGENVELAGEID---DSIPTGLTQVSPEEFRRIEDEYLAKNPPKFLKRQAEKTE 121
Query: 126 RYE 128
+E
Sbjct: 122 EHE 124
>gi|452820116|gb|EME27163.1| U6 snRNA-associated Sm-like protein LSm1 [Galdieria sulphuraria]
Length = 153
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL ++D+++LVL RDGR ++G L S+DQ+AN VLE ER ++ D YCD PLG+++I
Sbjct: 31 AGSLVEHIDRQILVLQRDGRYIVGLLRSYDQYANLVLENTFERFVLNDSYCDEPLGVFII 90
Query: 72 RGENVVLIGELDLERD-ELPPHLTHVSVAEIKRV 104
RGENV L+GE+D E++ + HL VS+ + K+
Sbjct: 91 RGENVALLGEVDGEKESQWLSHLHTVSLEDTKKT 124
>gi|308510334|ref|XP_003117350.1| CRE-LSM-1 protein [Caenorhabditis remanei]
gi|308242264|gb|EFO86216.1| CRE-LSM-1 protein [Caenorhabditis remanei]
Length = 125
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Query: 8 DVYL--STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP 65
D YL + SL LDKKLLV+LRDGRKL+G L S DQFAN +LE ER V +C+
Sbjct: 5 DPYLPGAISLFEQLDKKLLVVLRDGRKLIGFLRSIDQFANLILEDVVERTFVEKYFCETG 64
Query: 66 LGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVSALFFSLLFLSLHKRCCLLTM 125
G +IRGENV L GE+D D +P LT VS E +R+ + + KR T
Sbjct: 65 QGFMLIRGENVELAGEID---DSIPTGLTQVSPEEFRRIEDEYLAKNPPKFLKRQAEKTE 121
Query: 126 RYE 128
+E
Sbjct: 122 EHE 124
>gi|195025615|ref|XP_001986091.1| GH21171 [Drosophila grimshawi]
gi|193902091|gb|EDW00958.1| GH21171 [Drosophila grimshawi]
Length = 137
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L +DKKL+VLLRDGR L+G L S DQFAN VL+ ER+ VG+ Y DIP G+++I
Sbjct: 10 TAHLLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFII 69
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D E+++ P L +SV I
Sbjct: 70 RGENVVLLGEIDREKEQKLP-LKEISVDAI 98
>gi|339248761|ref|XP_003373368.1| putative LSM domain protein [Trichinella spiralis]
gi|316970522|gb|EFV54449.1| putative LSM domain protein [Trichinella spiralis]
Length = 139
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Query: 7 DDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPL 66
D ++ + SL L+KK+LV+LRDGR ++G L S DQFAN VLE ER++V ++Y DI +
Sbjct: 6 DRLFGAASLLEDLNKKVLVILRDGRNMIGYLRSVDQFANIVLEDTVERIVVNNMYSDISM 65
Query: 67 GLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVSA 106
GL+++RGENV L+GELD + + LT ++ E + A
Sbjct: 66 GLFIVRGENVFLVGELD-QNKPMEEILTKTTIKEAVNLQA 104
>gi|407917694|gb|EKG10998.1| hypothetical protein MPH_12001 [Macrophomina phaseolina MS6]
Length = 170
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 63/89 (70%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L DKKL+V LRDGRKL+G L S+DQFAN VL+ ER+ V +LY DI G++++
Sbjct: 43 AAQLLDLTDKKLMVALRDGRKLIGVLRSWDQFANLVLQETIERIFVQNLYADINRGVFLV 102
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAE 100
RGENV+L+GE+DL++D+ P + AE
Sbjct: 103 RGENVLLLGEIDLDKDDYIPEPFEQAPAE 131
>gi|353237452|emb|CCA69424.1| related to LSM1-Sm-like (Lsm) protein [Piriformospora indica DSM
11827]
Length = 136
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S +L +DKK+LV+LRDGRKL+G L S+DQFAN VLEG ER +G + ++P+G+ VI
Sbjct: 10 SGALVDCVDKKVLVILRDGRKLIGVLRSYDQFANLVLEGTIERKHLGPYFAELPVGVMVI 69
Query: 72 RGENVVLIGELDLE-RDELP 90
RGENVVL+GE+DL+ DE+P
Sbjct: 70 RGENVVLLGEIDLDVEDEVP 89
>gi|167520007|ref|XP_001744343.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777429|gb|EDQ91046.1| predicted protein [Monosiga brevicollis MX1]
Length = 126
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%)
Query: 6 PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP 65
P + + +L LDKKL+ +LRDGRKL+G L S DQFAN VL+ ER VG+ Y D+P
Sbjct: 7 PSTISATAALIDELDKKLICVLRDGRKLIGYLRSVDQFANLVLQDTVERYYVGNEYGDVP 66
Query: 66 LGLYVIRGENVVLIGELDLERDE 88
+G+Y+IRGENV L+GE+D D+
Sbjct: 67 VGIYIIRGENVALLGEMDASADQ 89
>gi|349805161|gb|AEQ18053.1| putative u6 snrna-associated sm protein lsm1 [Hymenochirus
curtipes]
Length = 83
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 57/76 (75%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIEDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERD 87
RGENVVL+GE+DLE++
Sbjct: 67 RGENVVLLGEIDLEKE 82
>gi|57525910|ref|NP_001003551.1| U6 snRNA-associated Sm-like protein LSm1 [Danio rerio]
gi|50417210|gb|AAH78334.1| Zgc:101136 [Danio rerio]
Length = 133
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG + DIP G++V+
Sbjct: 7 TASLIEDIDKKHLVLLRDGRTLIGILRSIDQFANLVLHQTVERIHVGKKFGDIPRGIFVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DL++ E L VS+ EI
Sbjct: 67 RGENVVLLGEVDLDK-ECDQILQRVSIEEI 95
>gi|341888884|gb|EGT44819.1| CBN-LSM-1 protein [Caenorhabditis brenneri]
Length = 125
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Query: 8 DVYL--STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP 65
D YL + SL LDKKLLV+LRDGRKL+G L S DQFAN +LE ER V +C+
Sbjct: 5 DPYLPGAISLFEQLDKKLLVVLRDGRKLIGFLRSIDQFANLILEDVVERTFVEKYFCETS 64
Query: 66 LGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVSALFFSLLFLSLHKRCCLLTM 125
G +IRGENV L GE+D D +P LT VS E +R+ + + KR
Sbjct: 65 QGFMLIRGENVELAGEID---DSIPNGLTQVSPEEFRRIEDDYLARNPPKFLKRPAEQKE 121
Query: 126 RYE 128
+E
Sbjct: 122 EHE 124
>gi|389609539|dbj|BAM18381.1| Sm protein G, putative [Papilio xuthus]
Length = 138
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L LDKKL+VLLRDGR L+G L DQFAN VL ER+ VG Y DIP G++++
Sbjct: 11 TAHLLDELDKKLMVLLRDGRTLIGYLRCVDQFANLVLHKTIERIHVGKEYGDIPRGIFIV 70
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D ++++ P LT VSV +I
Sbjct: 71 RGENVVLLGEIDKDKEDNLP-LTEVSVDDI 99
>gi|440897037|gb|ELR48810.1| U6 snRNA-associated Sm-like protein LSm1, partial [Bos grunniens
mutus]
Length = 118
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 21 KKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIG 80
+K LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+RGENVVL+G
Sbjct: 1 EKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLG 60
Query: 81 ELDLERDELPPHLTHVSVAEI 101
E+DLE++ P L VS+ EI
Sbjct: 61 EIDLEKESDTP-LQQVSIEEI 80
>gi|213410363|ref|XP_002175951.1| mRNA decapping complex subunit [Schizosaccharomyces japonicus
yFS275]
gi|212003998|gb|EEB09658.1| mRNA decapping complex subunit [Schizosaccharomyces japonicus
yFS275]
Length = 140
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 60/76 (78%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL Y+D+K++V+LRDG+KL+G L SFDQFAN +L+ ER+ +Y DI G+Y++
Sbjct: 13 SGSLVDYVDRKVIVILRDGKKLIGILRSFDQFANLMLQCTIERLYEDGMYGDIERGVYIV 72
Query: 72 RGENVVLIGELDLERD 87
RGENVVL+GE+DLER+
Sbjct: 73 RGENVVLLGEIDLERE 88
>gi|281210655|gb|EFA84821.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 132
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 63/90 (70%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKKL+V+LRDG+K +G + +FDQFAN +L+ ER+ VGD Y D LG++ I
Sbjct: 5 NASLCDEVDKKLIVVLRDGKKFIGVMRTFDQFANIILQDTIERIYVGDKYSDKHLGVFFI 64
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RG+ VV++GE+D +++ LT VS EI
Sbjct: 65 RGDTVVILGEIDPDKEVKEKKLTKVSWEEI 94
>gi|299472050|emb|CBN80133.1| Sm-like protein LSm1 [Ectocarpus siliculosus]
Length = 138
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL LDK+++V+LRDGR L+G + S+DQF+N VLE ER V D++ DI LGLY++
Sbjct: 25 SASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLV 84
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RG+ +VL+GELD R+E P L VS EI
Sbjct: 85 RGDALVLMGELDETREE-TPRLRRVSADEI 113
>gi|453089025|gb|EMF17065.1| Sm-like ribonucleo protein [Mycosphaerella populorum SO2202]
Length = 155
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 61/89 (68%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L DKKL+V LRDGRKL+G L S+DQF N VL+ ER+ V LY DI GL+++
Sbjct: 28 AAQLLDLTDKKLMVALRDGRKLIGVLRSWDQFGNLVLQDTVERLFVHHLYADIERGLFLV 87
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAE 100
RGENV+L+GE+DL++D+ P + AE
Sbjct: 88 RGENVLLLGEIDLDKDDYVPEPFEQASAE 116
>gi|315051182|ref|XP_003174965.1| hypothetical protein MGYG_02493 [Arthroderma gypseum CBS 118893]
gi|311340280|gb|EFQ99482.1| hypothetical protein MGYG_02493 [Arthroderma gypseum CBS 118893]
Length = 204
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L DKKL+++LRDGRKL+G L S+DQFAN VL+ ER+ +LY DIP G++++
Sbjct: 77 AAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANIVLQDTVERLYAENLYADIPRGVFLV 136
Query: 72 RGENVVLIGELDLER-DELPPHLTHVSVAEI 101
RGENV+L+GE+DL++ D++P +E+
Sbjct: 137 RGENVLLLGEIDLDKDDDIPEPYRQAPASEV 167
>gi|221129197|ref|XP_002167435.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Hydra
magnipapillata]
Length = 140
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 65/95 (68%), Gaps = 4/95 (4%)
Query: 10 YLSTSLAS---YLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPL 66
YL T AS LDK+LLV+LRDGR L+G L S DQFAN VLE ER+ VG+ Y DI
Sbjct: 7 YLKTRTASLLTELDKRLLVVLRDGRTLIGELRSVDQFANVVLENTIERIHVGNKYGDISR 66
Query: 67 GLYVIRGENVVLIGELDLERDELPPHLTHVSVAEI 101
G++++RG+N+VL+GE+D + E L V+V EI
Sbjct: 67 GVFIVRGDNIVLLGEMDALK-EKSSGLKEVTVEEI 100
>gi|392571535|gb|EIW64707.1| Sm-like ribonucleo protein [Trametes versicolor FP-101664 SS1]
Length = 136
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL +D+K+LVLLRDGRKL G L S+DQFAN VLE ER+ D++ ++ GL++I
Sbjct: 10 SGSLVDCVDRKMLVLLRDGRKLQGVLRSYDQFANLVLEDTVERIYHQDVFAEMWRGLFLI 69
Query: 72 RGENVVLIGELDLER-DELPPHLTHVSVAE 100
RGENVVL+GE+DL++ DE+P SV E
Sbjct: 70 RGENVVLLGEIDLDQEDEVPLRQVEWSVLE 99
>gi|443683303|gb|ELT87602.1| hypothetical protein CAPTEDRAFT_179858 [Capitella teleta]
Length = 136
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK+LV+LRDGR L+G L S DQFAN VL ER+ VG + IP G+++I
Sbjct: 9 TASLVEEIDKKMLVVLRDGRTLIGFLRSIDQFANLVLHRTIERIHVGKKFGTIPHGIFLI 68
Query: 72 RGENVVLIGELDLE-RDELPPHLTHVSVAEI 101
RGENVVL+GE+DLE D+LP L V + EI
Sbjct: 69 RGENVVLLGEIDLENEDKLP--LEEVPIEEI 97
>gi|390358403|ref|XP_003729250.1| PREDICTED: LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein
LSm1-like [Strongylocentrotus purpuratus]
Length = 134
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL ++KKLLV+LRDGR L+G L S DQFAN VL ER+ VG Y DIP G+ V+
Sbjct: 7 TASLIDEINKKLLVVLRDGRTLIGILRSIDQFANLVLHRTIERIHVGRQYGDIPRGVXVV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D E +E L VS+ EI
Sbjct: 67 RGENVVLLGEIDTE-NESTHSLEEVSIDEI 95
>gi|449298949|gb|EMC94963.1| hypothetical protein BAUCODRAFT_34961 [Baudoinia compniacensis UAMH
10762]
Length = 198
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 72/127 (56%), Gaps = 4/127 (3%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L DKKL+V LRDGRKL+G L S+DQF N VL+ ER+ V ++Y DI GL+++
Sbjct: 71 AAQLLDLTDKKLMVALRDGRKLIGVLRSWDQFGNLVLQDTVERLFVQNVYADIDRGLFLV 130
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAE----IKRVSALFFSLLFLSLHKRCCLLTMRY 127
RGENV L+GE+DL++D+ P ++ E +K+ + KR L
Sbjct: 131 RGENVSLLGEIDLDKDDYIPEPYQLASVEKVFALKKAEDAERKKTDKTKQKRLADLGFEV 190
Query: 128 EIMGRSI 134
E G +I
Sbjct: 191 EHSGEAI 197
>gi|303315247|ref|XP_003067631.1| U6 snRNA-associated Sm-like protein LSm1, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240107301|gb|EER25486.1| U6 snRNA-associated Sm-like protein LSm1, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320035563|gb|EFW17504.1| small nuclear ribonucleoprotein [Coccidioides posadasii str.
Silveira]
Length = 209
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Query: 20 DKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLI 79
DKKL+++LRDGRKL+G L S+DQFAN VL+ ERV G+LY + P G+Y++RGENV+L+
Sbjct: 90 DKKLVLILRDGRKLIGVLRSWDQFANLVLQDTVERVYSGNLYGEEPRGVYLVRGENVLLL 149
Query: 80 GELDLER-DELPPHLTHVSVAEI 101
GE+DL++ D++P E+
Sbjct: 150 GEIDLDKEDDIPEPYRQAPYKEV 172
>gi|392868828|gb|EAS34628.2| small nuclear ribonucleoprotein [Coccidioides immitis RS]
Length = 209
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Query: 20 DKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLI 79
DKKL+++LRDGRKL+G L S+DQFAN VL+ ERV G+LY + P G+Y++RGENV+L+
Sbjct: 90 DKKLVLILRDGRKLIGVLRSWDQFANLVLQDTVERVYSGNLYGEEPRGVYLVRGENVLLL 149
Query: 80 GELDLER-DELPPHLTHVSVAEI 101
GE+DL++ D++P E+
Sbjct: 150 GEIDLDKEDDIPEPYRQAPYKEV 172
>gi|326475987|gb|EGD99996.1| U6 snRNA-associated Sm-like protein LSm1 [Trichophyton tonsurans
CBS 112818]
gi|326485013|gb|EGE09023.1| small nuclear ribonucleoprotein [Trichophyton equinum CBS 127.97]
Length = 202
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L DKKL+++LRDGRKL+G L S+DQFAN VL+ ER+ +LY DIP G++++
Sbjct: 75 AAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANIVLQDTIERLYAENLYADIPRGVFLV 134
Query: 72 RGENVVLIGELDLER-DELPPHLTHVSVAEI 101
RGENV+L+GE+DL++ D++P +E+
Sbjct: 135 RGENVLLLGEIDLDKDDDIPEPYRQAPASEV 165
>gi|327303990|ref|XP_003236687.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
gi|326462029|gb|EGD87482.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
Length = 201
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L DKKL+++LRDGRKL+G L S+DQFAN VL+ ER+ +LY DIP G++++
Sbjct: 74 AAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANIVLQDTIERLYAENLYADIPRGVFLV 133
Query: 72 RGENVVLIGELDLER-DELPPHLTHVSVAEI 101
RGENV+L+GE+DL++ D++P +E+
Sbjct: 134 RGENVLLLGEIDLDKDDDIPEPYRQAPASEV 164
>gi|242021605|ref|XP_002431235.1| lsm1, putative [Pediculus humanus corporis]
gi|212516484|gb|EEB18497.1| lsm1, putative [Pediculus humanus corporis]
Length = 139
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL LDKKL+VLLRDGR L+G L S DQFAN VL ER+ VG Y DI G++++
Sbjct: 12 TASLVEELDKKLMVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGKEYGDIYRGVFIV 71
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGEN+VL+GE+D+++++ P L VSV +I
Sbjct: 72 RGENMVLLGEIDVDKEKDLP-LDEVSVDDI 100
>gi|170047804|ref|XP_001851399.1| CaSm [Culex quinquefasciatus]
gi|167870086|gb|EDS33469.1| CaSm [Culex quinquefasciatus]
Length = 134
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L +DKKL+VLLRDGR L+G L S DQFAN VL ER+ VG+ Y DI G+++I
Sbjct: 8 TAHLLDEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVFII 67
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D E++ P L +SV +I
Sbjct: 68 RGENVVLLGEIDREKENNLP-LKEISVDDI 96
>gi|428178017|gb|EKX46894.1| hypothetical protein GUITHDRAFT_152240 [Guillardia theta CCMP2712]
Length = 210
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 61/89 (68%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIR 72
SL LDK++LV LRDGR +G + SFDQ+ N VLE A ER +VG+ + D +GLYVIR
Sbjct: 88 ASLVEDLDKRVLVTLRDGRHFVGFMRSFDQYGNVVLEDAFERHVVGNSFADERMGLYVIR 147
Query: 73 GENVVLIGELDLERDELPPHLTHVSVAEI 101
GEN+VL+ ELD+ +++ P L V + I
Sbjct: 148 GENLVLLAELDMHKEQNQPKLREVPLQTI 176
>gi|402217673|gb|EJT97752.1| Sm-like ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 135
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL +DKK+L++LRDGRKL+G L S+DQFAN VLE + ER+ G Y D+ G++VI
Sbjct: 10 SGSLVDCVDKKVLIVLRDGRKLVGVLRSYDQFANLVLEDSYERIFHGLEYADVWKGVFVI 69
Query: 72 RGENVVLIGELDLE-RDELPPHLTHVSVAEI 101
RGENVVL+GE+DL+ DE+P L V + +I
Sbjct: 70 RGENVVLLGEIDLDVEDEVP--LVQVPLQQI 98
>gi|395334284|gb|EJF66660.1| Sm-like ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
Length = 136
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL +D+K+LV+LRDGRKL G L S+DQFAN VLE ER+ D++ ++ GL++I
Sbjct: 10 SGSLVDCVDRKMLVVLRDGRKLQGVLRSYDQFANLVLEDTVERIYHQDVFAEVWRGLFLI 69
Query: 72 RGENVVLIGELDLER-DELPPHLTHVSVAE 100
RGENVVL+GE+DL++ DE+P +V E
Sbjct: 70 RGENVVLLGEIDLDQEDEIPLRQVEWAVLE 99
>gi|157136994|ref|XP_001656966.1| Sm protein G, putative [Aedes aegypti]
gi|108884233|gb|EAT48458.1| AAEL000478-PA [Aedes aegypti]
Length = 160
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L +DKKL+VLLRDGR L+G L S DQFAN VL ER+ VG+ Y DI G+++I
Sbjct: 34 TAHLLDEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVFII 93
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D E++ P L +SV +I
Sbjct: 94 RGENVVLLGEIDREKENNLP-LKEISVDDI 122
>gi|389751358|gb|EIM92431.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 136
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL +D+K+LV+LRDG+KL G L S+DQFAN VLE ER+ + Y D +GLY+I
Sbjct: 10 SGSLVDCVDRKMLVILRDGKKLHGVLRSYDQFANLVLEETIERIYSKNHYADKYVGLYLI 69
Query: 72 RGENVVLIGELDL-ERDELP 90
RGENVVL+GE+DL E DE+P
Sbjct: 70 RGENVVLLGEIDLDEEDEIP 89
>gi|196009920|ref|XP_002114825.1| hypothetical protein TRIADDRAFT_58702 [Trichoplax adhaerens]
gi|190582887|gb|EDV22959.1| hypothetical protein TRIADDRAFT_58702 [Trichoplax adhaerens]
Length = 137
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ +L S +DKKL+++L+DGR L+G L S DQFAN VL+ ER+ VG Y DIP GL+VI
Sbjct: 11 TANLMSDIDKKLMIVLKDGRTLIGFLRSVDQFANLVLQDTIERIHVGKQYGDIPRGLFVI 70
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RG+NV ++GE+D ++D L VS+ +I
Sbjct: 71 RGDNVAILGEMDDKKD--LTQLQKVSIEDI 98
>gi|449019941|dbj|BAM83343.1| similar to Sm-like protein LSm1 [Cyanidioschyzon merolae strain
10D]
Length = 124
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 63/98 (64%), Gaps = 3/98 (3%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD-LYCDIPLGLY 69
+S +L LDK++LV LRDGR +G L SFDQ+ N LE A ERV+V D + DIP GL
Sbjct: 1 MSDALVDDLDKRVLVYLRDGRFFLGYLRSFDQYGNLTLEDATERVVVNDEAFADIPRGLQ 60
Query: 70 VIRGENVVLIGELDLERDELP--PHLTHVSVAEIKRVS 105
V RGENVVL G +D E+ EL L V+ EI+R+
Sbjct: 61 VFRGENVVLFGAVDSEQRELEFLRKLRRVTEEEIRRME 98
>gi|388582146|gb|EIM22452.1| RNA cap binding protein [Wallemia sebi CBS 633.66]
Length = 146
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 59/77 (76%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S L + +DKK+LV LRDGRK++G L SFDQFAN VL A ER+ + Y DIP G+++I
Sbjct: 10 SGQLLNCVDKKMLVALRDGRKIIGVLRSFDQFANLVLNDAVERIHALNEYADIPRGIFLI 69
Query: 72 RGENVVLIGELDLERDE 88
RGENVVL+GE+DL+ ++
Sbjct: 70 RGENVVLMGEVDLDTED 86
>gi|405961597|gb|EKC27376.1| U6 snRNA-associated Sm-like protein LSm1 [Crassostrea gigas]
Length = 124
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 21 KKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIG 80
+KLLV+LRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+RGENVVL+G
Sbjct: 7 EKLLVVLRDGRTLIGYLRSIDQFANLVLHRTIERIHVGKKYGDIPRGIFVVRGENVVLLG 66
Query: 81 ELDLERDELPPHLTHVSVAEI 101
E+DLE +E P L V + +I
Sbjct: 67 EIDLE-NENNPQLEEVPIDDI 86
>gi|440801773|gb|ELR22778.1| LSM domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 135
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +D ++LV+L+DGRKL+G L SFDQ+AN VLE ER+ VG+ Y + LGL+++
Sbjct: 18 TVSLVEEVDHRILVVLQDGRKLLGVLRSFDQYANLVLEQTIERIYVGEQYAEKNLGLFLV 77
Query: 72 RGENVVLIGELDLERDEL-PPHLTHVSVAEIK 102
RG+N+VL+G +D R+EL LT V++ EI+
Sbjct: 78 RGDNIVLLGPIDESREELCVKGLTKVTLPEIE 109
>gi|326436185|gb|EGD81755.1| hypothetical protein PTSG_02467 [Salpingoeca sp. ATCC 50818]
Length = 132
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DK L+ +LRDGRKL+G L + DQFAN V + A ER+ V D Y DI G+ ++
Sbjct: 8 TASLVEEVDKCLICVLRDGRKLIGYLRTVDQFANLVFQDAVERIYVDDYYGDIQQGIVIV 67
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI-KRVSALFFSLLFLSLHKRCCLLTMRYE 128
RGENVVL+GELD E + LT VS A+I +R +R LTM+ E
Sbjct: 68 RGENVVLLGELDAESAQ-NSKLTRVSAADILQRKQVQLEERKKSEQEERQRRLTMQRE 124
>gi|327349130|gb|EGE77987.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis ATCC
18188]
Length = 239
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
Query: 21 KKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIG 80
+KL+++LRDGRKL+G L S+DQFAN VL+G ER+ G+L+ DI G+Y+IRGENV+L+G
Sbjct: 121 EKLVLVLRDGRKLIGVLRSWDQFANLVLQGTVERLYAGNLFADIQRGIYLIRGENVLLLG 180
Query: 81 ELDLER-DELPPHLTHVSVAEI 101
E+DL++ D++P E+
Sbjct: 181 EVDLDKEDDIPTGYRQAPFEEV 202
>gi|410925290|ref|XP_003976114.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Takifugu
rubripes]
Length = 133
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN V ER+ VG + DIP G++++
Sbjct: 7 TASLIDDIDKKHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DL++ L VS+ EI
Sbjct: 67 RGENVVLLGEIDLDK-PCDTFLQQVSIEEI 95
>gi|47209042|emb|CAF91744.1| unnamed protein product [Tetraodon nigroviridis]
Length = 133
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN V ER+ VG + DIP G++++
Sbjct: 7 TASLIDDIDKKHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+DL++ L VS+ EI
Sbjct: 67 RGENVVLLGEIDLDK-PCDAFLQQVSIEEI 95
>gi|302695391|ref|XP_003037374.1| hypothetical protein SCHCODRAFT_64638 [Schizophyllum commune
H4-8]
gi|300111071|gb|EFJ02472.1| hypothetical protein SCHCODRAFT_64638 [Schizophyllum commune
H4-8]
Length = 136
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 62/80 (77%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S +L +D+K+LV+LRDGRKL+G L S+DQFAN VLE E++ +L+ + +GL++I
Sbjct: 10 SGALVDSVDRKMLVVLRDGRKLVGVLRSYDQFANLVLEDTWEKIYHSNLWAEKHVGLFLI 69
Query: 72 RGENVVLIGELDLERDELPP 91
RGENVVL+GE+DL+R++ P
Sbjct: 70 RGENVVLMGEIDLDREDDVP 89
>gi|367035444|ref|XP_003667004.1| hypothetical protein MYCTH_57908 [Myceliophthora thermophila ATCC
42464]
gi|347014277|gb|AEO61759.1| hypothetical protein MYCTH_57908 [Myceliophthora thermophila ATCC
42464]
Length = 159
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 65/99 (65%), Gaps = 9/99 (9%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG---------DLYC 62
+ L DKKL+V LRDGRKL+G L S+DQFAN VL+ ER+ V LY
Sbjct: 23 AAQLLDLTDKKLMVALRDGRKLLGILRSWDQFANLVLQSTKERIFVAPGTVPNQPRGLYA 82
Query: 63 DIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEI 101
DI GL+++RGENV+L+GE+DL++++ PP ++ AE+
Sbjct: 83 DIDRGLFLVRGENVLLLGEIDLDKEDDPPAGYDLADAEL 121
>gi|170083973|ref|XP_001873210.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650762|gb|EDR15002.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 136
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL +D+K+LV+LRDGRKL G L S+DQFAN VLE ER+ G+ + + GL++I
Sbjct: 10 SGSLVDCVDRKMLVILRDGRKLHGVLRSYDQFANLVLEDTVERIYHGNAFAENWHGLFLI 69
Query: 72 RGENVVLIGELDLERDELPPHLTHVS 97
RGENVVL+GE+DL+R++ P LT V
Sbjct: 70 RGENVVLLGEIDLDREDDIP-LTQVD 94
>gi|432874730|ref|XP_004072564.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Oryzias
latipes]
Length = 133
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 5/92 (5%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN V ER+ VG + DIP G++++
Sbjct: 7 TASLIDDIDKKHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIV 66
Query: 72 RGENVVLIGELDLER--DELPPHLTHVSVAEI 101
RGENVVL+GE+DL++ D + L VS+ EI
Sbjct: 67 RGENVVLLGEIDLDKPCDTV---LQQVSIEEI 95
>gi|209734138|gb|ACI67938.1| U6 snRNA-associated Sm-like protein LSm1 [Salmo salar]
Length = 132
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 5/92 (5%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN V ER+ VG + DIP G++++
Sbjct: 7 TASLIDDIDKKHLVLLRDGRTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIV 66
Query: 72 RGENVVLIGELDLER--DELPPHLTHVSVAEI 101
RGENVVL+GE+D+++ D + L VS+ EI
Sbjct: 67 RGENVVLLGEMDIDKLCDNV---LQQVSIEEI 95
>gi|320585919|gb|EFW98598.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 182
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 21/141 (14%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD------------ 59
+ L DKKL+V+LRDGRK++G L ++DQFAN +L+ A ER +
Sbjct: 38 AAQLLDLTDKKLMVVLRDGRKVIGVLRTWDQFANLILQNAIERTFLAPGTFEAAAAPESA 97
Query: 60 -----LYCDIPLGLYVIRGENVVLIGELDLER-DELPPHLTHVS---VAEIKRVSALFFS 110
LY DIP G Y++RGENV+L+GE+DL+R DE PP + +AE+ +
Sbjct: 98 AQGHGLYADIPRGTYLVRGENVLLLGEIDLDRDDEAPPGHDKIDSDVMAELHKKKKAVDK 157
Query: 111 LLFLSLHKRCCLLTMRYEIMG 131
S K+ +L E MG
Sbjct: 158 AAEKSRVKKLSVLGFEGENMG 178
>gi|154291173|ref|XP_001546172.1| hypothetical protein BC1G_15358 [Botryotinia fuckeliana B05.10]
gi|347441882|emb|CCD34803.1| hypothetical protein [Botryotinia fuckeliana]
Length = 181
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 14/99 (14%)
Query: 20 DKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD-------------LYCDIPL 66
DKKL++ LRDGRKL+G L S+DQFAN VL+ ER+ + LY DIP
Sbjct: 48 DKKLMISLRDGRKLIGILRSWDQFANIVLQSTIERIFIAPPPSSSPQGATQPGLYADIPR 107
Query: 67 GLYVIRGENVVLIGELDLER-DELPPHLTHVSVAEIKRV 104
GL+++RGENV+L+GE+DL++ DE PP + R+
Sbjct: 108 GLFLVRGENVLLLGEIDLDKDDEAPPGYEKADAEVVNRL 146
>gi|226286851|gb|EEH42364.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 138
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 4/90 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L DKKL+++LRDGRKL+G L S+DQFAN VL+G ER+ G L+ D+ G+Y++
Sbjct: 16 AAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQGTVERIYAGHLFADVQRGIYLV 75
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENV+L+GE+ D++P S E+
Sbjct: 76 RGENVLLLGEI----DDIPSGYRQASYDEV 101
>gi|209733674|gb|ACI67706.1| U6 snRNA-associated Sm-like protein LSm1 [Salmo salar]
Length = 133
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 5/92 (5%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN V ER+ VG + DIP G++++
Sbjct: 7 TASLIDDIDKKHLVLLRDGRTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIV 66
Query: 72 RGENVVLIGELDLER--DELPPHLTHVSVAEI 101
RGENVVL+GE+D+++ D + L VS+ EI
Sbjct: 67 RGENVVLLGEIDIDKLCDNV---LQQVSIEEI 95
>gi|17533843|ref|NP_496385.1| Protein LSM-1 [Caenorhabditis elegans]
gi|3876945|emb|CAA93263.1| Protein LSM-1 [Caenorhabditis elegans]
Length = 125
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Query: 8 DVYL--STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP 65
D YL + SL LDKKLLV+LRDGRKL+G L S DQFAN +LE ER V +C+
Sbjct: 5 DPYLPGAISLFEQLDKKLLVVLRDGRKLIGFLRSIDQFANLILEDVVERTFVEKYFCETG 64
Query: 66 LGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVSALFFSLLFLSLHKRCCLLTM 125
G +IRGENV L GE+D D + LT VS E +R+ + + KR T
Sbjct: 65 QGFMLIRGENVELAGEID---DTIETGLTQVSPEEFRRLEDEYIAKNPPKFLKRQAEKTE 121
Query: 126 RYE 128
++
Sbjct: 122 EHD 124
>gi|348516098|ref|XP_003445576.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like
[Oreochromis niloticus]
Length = 133
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 5/92 (5%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN V ER+ VG + DIP G++++
Sbjct: 7 TASLIDDIDKKHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIV 66
Query: 72 RGENVVLIGELDLER--DELPPHLTHVSVAEI 101
RGENVVL+GE+D+++ D + L VS+ EI
Sbjct: 67 RGENVVLLGEIDMDKPCDTV---LQQVSIEEI 95
>gi|393247771|gb|EJD55278.1| Sm-like ribonucleo protein [Auricularia delicata TFB-10046 SS5]
Length = 136
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL +DKK+LV+LRDGRKL+G L S+DQFAN VLE ER G Y ++ G+++I
Sbjct: 10 SGSLVDCVDKKMLVVLRDGRKLVGVLRSYDQFANLVLEDTIERFYHGQNYGEVRRGVFLI 69
Query: 72 RGENVVLIGELDLE-RDELP 90
RGENVVL+GE+DL+ D++P
Sbjct: 70 RGENVVLLGEIDLDVEDQVP 89
>gi|209733634|gb|ACI67686.1| U6 snRNA-associated Sm-like protein LSm1 [Salmo salar]
gi|303661389|gb|ADM16038.1| U6 snRNA-associated Sm-like protein LSm1 [Salmo salar]
Length = 133
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 5/92 (5%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN V ER+ VG + DIP G++++
Sbjct: 7 TASLIDDIDKKHLVLLRDGRTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIV 66
Query: 72 RGENVVLIGELDLER--DELPPHLTHVSVAEI 101
RGENVVL+GE+D+++ D + L VS+ EI
Sbjct: 67 RGENVVLLGEIDMDKPCDTV---LQQVSIEEI 95
>gi|312380092|gb|EFR26184.1| hypothetical protein AND_26313 [Anopheles darlingi]
Length = 134
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ + +DKKL+VLL DGR L+G L S DQFAN VL ER+ VG+ Y DI G+++I
Sbjct: 8 TAHMLDEVDKKLMVLLHDGRTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVFII 67
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVVL+GE+D E++ P L +SV +I
Sbjct: 68 RGENVVLLGEIDREKESNLP-LREISVDDI 96
>gi|313213235|emb|CBY37078.1| unnamed protein product [Oikopleura dioica]
gi|313227656|emb|CBY22803.1| unnamed protein product [Oikopleura dioica]
Length = 135
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L +DKK LV+LRDGR L+G L + DQFAN VL ER+ V + DIP G++V+
Sbjct: 8 TAGLIEDIDKKHLVVLRDGRTLIGILRAIDQFANLVLHQTVERIHVDGFFGDIPRGIFVV 67
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENV L GE+DLE +E +L VSV EI
Sbjct: 68 RGENVALFGEVDLE-NENRGNLQEVSVEEI 96
>gi|401883959|gb|EJT48139.1| RNA cap binding protein [Trichosporon asahii var. asahii CBS
2479]
Length = 147
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL +DKK+LV+LRDGRKL+G L S+DQFAN +LE ER+ G + DI +G+ +I
Sbjct: 10 SGSLVDLVDKKVLVVLRDGRKLIGVLRSYDQFANFLLESTVERLYNGFEFADIDIGVLLI 69
Query: 72 RGENVVLIGELDL-ERDELP 90
RGENVV +GE+DL DE+P
Sbjct: 70 RGENVVALGEIDLIAEDEIP 89
>gi|391341680|ref|XP_003745155.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like
[Metaseiulus occidentalis]
Length = 166
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 64/96 (66%), Gaps = 3/96 (3%)
Query: 8 DVYL--STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP 65
+VYL + SL LDK L+VLLRDGR L+G L S DQFAN VL ER+ VG Y DIP
Sbjct: 31 NVYLPGTVSLLEDLDKTLMVLLRDGRVLIGILRSIDQFANLVLHRTIERIHVGKKYGDIP 90
Query: 66 LGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEI 101
G++++RGENVVL+GE + R+ L L V + EI
Sbjct: 91 RGVFIVRGENVVLLGEYEESREGL-VGLQKVGIDEI 125
>gi|346324590|gb|EGX94187.1| small nuclear ribonucleoprotein (LSM1), putative [Cordyceps
militaris CM01]
Length = 178
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 66/104 (63%), Gaps = 18/104 (17%)
Query: 20 DKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV-----------------GDLYC 62
DKKL+V+LRDGRKL+G L S+DQFAN VL+ ER+ LY
Sbjct: 41 DKKLMVVLRDGRKLVGVLRSWDQFANIVLQSTTERLFALQPPQPSDAAPSDTAPPRGLYA 100
Query: 63 DIPLGLYVIRGENVVLIGELDLERDELPPH-LTHVSVAEIKRVS 105
DI G++++RGENV+L+GE+DL+RD+LPP VA +KR++
Sbjct: 101 DILHGIFLVRGENVLLLGEMDLDRDDLPPPGYEQGEVALVKRLA 144
>gi|406696065|gb|EKC99361.1| RNA cap binding protein [Trichosporon asahii var. asahii CBS
8904]
Length = 113
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL +DKK+LV+LRDGRKL+G L S+DQFAN +LE ER+ G + DI +G+ +I
Sbjct: 10 SGSLVDLVDKKVLVVLRDGRKLIGVLRSYDQFANFLLESTVERLYNGFEFADIDIGVLLI 69
Query: 72 RGENVVLIGELDL-ERDELP 90
RGENVV +GE+DL DE+P
Sbjct: 70 RGENVVALGEIDLIAEDEIP 89
>gi|403294428|ref|XP_003938189.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Saimiri
boliviensis boliviensis]
Length = 102
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 52/71 (73%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN VL ER+ VG Y DIP G++V+
Sbjct: 7 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVV 66
Query: 72 RGENVVLIGEL 82
RGENVVL+GE+
Sbjct: 67 RGENVVLLGEI 77
>gi|118794287|ref|XP_321407.3| AGAP001686-PA [Anopheles gambiae str. PEST]
gi|116116223|gb|EAA00900.3| AGAP001686-PA [Anopheles gambiae str. PEST]
Length = 134
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 19 LDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVL 78
+DKKL+VLL DGR L+G L S DQFAN VL ER+ VG+ Y DI G+ +IRGENVVL
Sbjct: 15 VDKKLMVLLHDGRTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVVIIRGENVVL 74
Query: 79 IGELDLERDELPPHLTHVSVAEI 101
+GE+D E++ P L +SV +I
Sbjct: 75 LGEIDREKESTLP-LREISVDDI 96
>gi|392597347|gb|EIW86669.1| Sm-like ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 136
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 60/80 (75%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL +D+K+LV+LRDGRKL G L S+DQFAN VLE ER+ G+ + + GL++I
Sbjct: 10 SGSLVDCVDRKMLVILRDGRKLHGVLRSYDQFANLVLEDTVERIYHGNAFAEHWHGLFLI 69
Query: 72 RGENVVLIGELDLERDELPP 91
RGENVVL+GE+DL++++ P
Sbjct: 70 RGENVVLLGEVDLDQEDDVP 89
>gi|254281302|ref|NP_001156840.1| LSM1 homolog, U6 small nuclear RNA associated [Acyrthosiphon pisum]
Length = 135
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 64/92 (69%), Gaps = 5/92 (5%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ +L LDKKL+VLLRDGR L+G L S DQ+AN +L+ ER+ VG + DIP G++++
Sbjct: 8 TATLLYELDKKLMVLLRDGRTLIGYLRSVDQYANLLLQQTVERIHVGKKFGDIPRGVFLV 67
Query: 72 RGENVVLIGELDL--ERDELPPHLTHVSVAEI 101
RGENVVL+GE+D E D++ VS+ +I
Sbjct: 68 RGENVVLLGEIDALKEADQM---FERVSIGDI 96
>gi|323447461|gb|EGB03380.1| hypothetical protein AURANDRAFT_72740 [Aureococcus anophagefferens]
Length = 129
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 65/97 (67%), Gaps = 7/97 (7%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE-RVIVGD------LYCDI 64
+ SL LDKK+L++LRDGR L+G + SFDQF+N VLE E RV++ D +Y D+
Sbjct: 13 AASLVDQLDKKVLIILRDGRNLVGVMRSFDQFSNVVLEDTYERRVVIPDDESQPAVYGDV 72
Query: 65 PLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEI 101
PLGLYVIRG++VVL+GE+ E + H + + ++
Sbjct: 73 PLGLYVIRGDSVVLLGEVAEELEASEDHPRQLPIEDV 109
>gi|209737588|gb|ACI69663.1| U6 snRNA-associated Sm-like protein LSm1 [Salmo salar]
Length = 168
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL +DKK LVLLRDGR L+G L S DQFAN V ER+ VG + DIP G++++
Sbjct: 7 TASLIDDIDKKHLVLLRDGRTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIV 66
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGE+VVL+GE+D+++ L VS+ EI
Sbjct: 67 RGESVVLLGEIDMDK-PCDTVLQQVSIEEI 95
>gi|328856685|gb|EGG05805.1| hypothetical protein MELLADRAFT_36483 [Melampsora larici-populina
98AG31]
Length = 152
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 65/102 (63%), Gaps = 12/102 (11%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG-----------DL 60
S +L +DKK+LV LRDGR L+G L S+DQFAN VL+ A ER+ VG
Sbjct: 13 SGALVDIVDKKILVSLRDGRSLIGVLRSYDQFANLVLQDAIERIHVGVGVGKDEERKTGQ 72
Query: 61 YCDIPLGLYVIRGENVVLIGELDLER-DELPPHLTHVSVAEI 101
Y DI G+Y++RGENVVL+GE+DL+R DE+ + + E+
Sbjct: 73 YADIWRGIYLVRGENVVLLGEIDLDREDEVIERCEQLPIEEV 114
>gi|358396059|gb|EHK45446.1| hypothetical protein TRIATDRAFT_79595 [Trichoderma atroviride IMI
206040]
Length = 168
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 11/91 (12%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG-----------DL 60
+ L DKKL+V+LRDGRKL+G L S+DQFAN VL+ ER+
Sbjct: 30 AAQLLDLTDKKLMVVLRDGRKLIGVLRSWDQFANIVLQSTTERIFAPRADNHDAQQPYGY 89
Query: 61 YCDIPLGLYVIRGENVVLIGELDLERDELPP 91
Y DIP G++++RGENV+L+GE+DL++D+ P
Sbjct: 90 YADIPHGIFLVRGENVLLLGEIDLDKDDDAP 120
>gi|440632690|gb|ELR02609.1| hypothetical protein GMDG_05572 [Geomyces destructans 20631-21]
Length = 185
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 63/95 (66%), Gaps = 4/95 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD---LYCDIPLGL 68
+ L DKKL+V LRDGRKL+G L S+DQFAN VL+ ER+ + D+P G
Sbjct: 56 AAQLLDLTDKKLMVALRDGRKLIGVLRSWDQFANLVLQSTSERLFTHSPPLQFADVPQGT 115
Query: 69 YVIRGENVVLIGELDLER-DELPPHLTHVSVAEIK 102
+++RGENV+L+GE+DL++ D++P VAE++
Sbjct: 116 FLVRGENVLLLGEVDLDKDDDVPVGFERGDVAEVQ 150
>gi|452847377|gb|EME49309.1| hypothetical protein DOTSEDRAFT_68172 [Dothistroma septosporum
NZE10]
Length = 164
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 61/82 (74%), Gaps = 4/82 (4%)
Query: 27 LRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLER 86
LRDGRKL+G L S+DQF N VL+ ER+ V +LY DI GL+++RGENV+L+GE+DL++
Sbjct: 52 LRDGRKLIGVLRSWDQFGNLVLQDTVERLFVQNLYADIERGLFLVRGENVLLLGEIDLDK 111
Query: 87 DE-LPPHLTHVSVAEIKRVSAL 107
D+ +PP +A +++V AL
Sbjct: 112 DDYVPPAF---ELAAVEKVFAL 130
>gi|221482497|gb|EEE20845.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 335
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 55/74 (74%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIR 72
T+L LDKKLLV+LRDGRKL+G L +FDQF N VLEG +R++V + Y D+ LG ++R
Sbjct: 220 TALEEELDKKLLVVLRDGRKLIGYLRTFDQFGNLVLEGTVQRMVVDNAYADLYLGCMIVR 279
Query: 73 GENVVLIGELDLER 86
G+N++L G +D R
Sbjct: 280 GDNMILFGAVDDSR 293
>gi|237841501|ref|XP_002370048.1| U6 snRNA-associated Sm-like protein LSm1, putative [Toxoplasma
gondii ME49]
gi|211967712|gb|EEB02908.1| U6 snRNA-associated Sm-like protein LSm1, putative [Toxoplasma
gondii ME49]
Length = 335
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 55/74 (74%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIR 72
T+L LDKKLLV+LRDGRKL+G L +FDQF N VLEG +R++V + Y D+ LG ++R
Sbjct: 220 TALEEELDKKLLVVLRDGRKLIGYLRTFDQFGNLVLEGTVQRMVVDNAYADLYLGCMIVR 279
Query: 73 GENVVLIGELDLER 86
G+N++L G +D R
Sbjct: 280 GDNMILFGAVDDSR 293
>gi|221504537|gb|EEE30210.1| lsm1, putative [Toxoplasma gondii VEG]
Length = 335
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 55/74 (74%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIR 72
T+L LDKKLLV+LRDGRKL+G L +FDQF N VLEG +R++V + Y D+ LG ++R
Sbjct: 220 TALEEELDKKLLVVLRDGRKLIGYLRTFDQFGNLVLEGTVQRMVVDNAYADLYLGCMIVR 279
Query: 73 GENVVLIGELDLER 86
G+N++L G +D R
Sbjct: 280 GDNMILFGAVDDSR 293
>gi|344303572|gb|EGW33821.1| hypothetical protein SPAPADRAFT_54105 [Spathaspora passalidarum
NRRL Y-27907]
Length = 166
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 58/77 (75%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ +L +D+K+ VLLRDGR L G L +FDQFAN VL+ ER+ + D + ++ G++++
Sbjct: 39 AAALVGSVDRKIFVLLRDGRNLFGILRTFDQFANLVLQDTYERIYLDDKFAEVYRGVFMV 98
Query: 72 RGENVVLIGELDLERDE 88
RGENVV++GELD++R++
Sbjct: 99 RGENVVMMGELDIDRED 115
>gi|336376345|gb|EGO04680.1| hypothetical protein SERLA73DRAFT_173904 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389388|gb|EGO30531.1| hypothetical protein SERLADRAFT_454838 [Serpula lacrymans var.
lacrymans S7.9]
Length = 136
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL +D+K+LV+LRDGRKL G L S+DQFAN VLE ER+ + + + G++VI
Sbjct: 10 SGSLVDCVDRKMLVILRDGRKLHGVLRSYDQFANLVLEDTVERLYHENTFAENWHGIFVI 69
Query: 72 RGENVVLIGELDLER-DELP 90
RGENVVL+GE+DL++ D++P
Sbjct: 70 RGENVVLLGEIDLDKEDDIP 89
>gi|409051525|gb|EKM61001.1| hypothetical protein PHACADRAFT_247289 [Phanerochaete carnosa
HHB-10118-sp]
Length = 116
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 54/69 (78%)
Query: 23 LLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGEL 82
+LV+LRDGRKL G L S+DQFAN VLE ER+ D+Y ++ GLY+IRGENVVL+GE+
Sbjct: 1 MLVVLRDGRKLHGVLRSYDQFANLVLEDTVERIYHQDVYAEMKRGLYLIRGENVVLLGEI 60
Query: 83 DLERDELPP 91
DL++++ P
Sbjct: 61 DLDQEDDVP 69
>gi|170578282|ref|XP_001894349.1| U6 snRNA-associated Sm-like protein LSm [Brugia malayi]
gi|158599116|gb|EDP36811.1| U6 snRNA-associated Sm-like protein LSm, putative [Brugia malayi]
gi|402591550|gb|EJW85479.1| LSM1 protein [Wuchereria bancrofti]
Length = 139
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 8 DVYLSTSLA--SYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP 65
D YL +L+ LDKKLLV+LRDGR L+G L + DQFAN VL ER+ V + Y DI
Sbjct: 5 DPYLPGALSLLEQLDKKLLVVLRDGRTLIGYLRTIDQFANLVLHETLERIHVDNYYGDIE 64
Query: 66 LGLYVIRGENVVLIGELDLERDEL 89
G+++IRGENVVL GE+D +++L
Sbjct: 65 RGVFLIRGENVVLAGEIDETKEQL 88
>gi|301108017|ref|XP_002903090.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097462|gb|EEY55514.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 102
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 53/70 (75%)
Query: 25 VLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDL 84
++LRDGR L+G L SFDQ++N +LE ER + G L+CDI LGL +IRG+N+VL+GELD
Sbjct: 1 MVLRDGRHLVGYLRSFDQYSNIILEDTYERHVAGGLFCDIELGLNIIRGDNIVLLGELDS 60
Query: 85 ERDELPPHLT 94
+++ PH+
Sbjct: 61 DKERDQPHMK 70
>gi|224004408|ref|XP_002295855.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585887|gb|ACI64572.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 109
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL----YCDIPLG 67
S S+ LD+++LV+LRDGR L+GTL +FDQFAN VLE ER I+G+ D+ LG
Sbjct: 6 SASIVEQLDQRMLVVLRDGRHLVGTLRTFDQFANMVLEDTSERRILGETTTCYQADVKLG 65
Query: 68 LYVIRGENVVLIGELDLE 85
LYV+RG+ VVL+GE+D E
Sbjct: 66 LYVVRGDVVVLMGEVDDE 83
>gi|403415254|emb|CCM01954.1| predicted protein [Fibroporia radiculosa]
Length = 116
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 63/95 (66%), Gaps = 11/95 (11%)
Query: 23 LLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGEL 82
+LV+LRDGRKL G L S+DQFAN VLE ER+ D++ ++ GL++IRGENVVL+GE+
Sbjct: 1 MLVVLRDGRKLQGVLRSYDQFANLVLEDTVERIFCQDVFAEVWRGLFLIRGENVVLLGEV 60
Query: 83 DLER-----------DELPPHLTHVSVAEIKRVSA 106
DL++ DEL P+ + +A+ KR +
Sbjct: 61 DLDQEDDVPLRQVAWDELEPYHSQEILAKKKREES 95
>gi|401397747|ref|XP_003880128.1| hypothetical protein NCLIV_005690 [Neospora caninum Liverpool]
gi|325114537|emb|CBZ50093.1| hypothetical protein NCLIV_005690 [Neospora caninum Liverpool]
Length = 174
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 55/74 (74%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIR 72
TSL LDKKLLV+LRDGRKL+G L +FDQF N VLEG +R++V + Y D+ +G ++R
Sbjct: 59 TSLEEELDKKLLVVLRDGRKLIGYLRTFDQFGNIVLEGTVQRLLVDNAYADLYVGCMIVR 118
Query: 73 GENVVLIGELDLER 86
G+N++L G +D R
Sbjct: 119 GDNMILFGAVDDSR 132
>gi|340515572|gb|EGR45825.1| predicted protein [Trichoderma reesei QM6a]
Length = 174
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 14/101 (13%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG-----------DL 60
+ L DKKL+V+LRDGRKL+G L S+DQFAN VL+ ER+
Sbjct: 36 AAQLLDLTDKKLMVVLRDGRKLIGVLRSWDQFANIVLQSTTERIFAPRPDNPRSEYPYGY 95
Query: 61 YCDIPLGLYVIRGENVVLIGELDLER-DELPP--HLTHVSV 98
+ DIP G++++RGENV+L+GE+DL++ D+ PP L V V
Sbjct: 96 FADIPHGIFLVRGENVLLLGEIDLDKDDDAPPGYQLAEVDV 136
>gi|346471247|gb|AEO35468.1| hypothetical protein [Amblyomma maculatum]
Length = 135
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Query: 25 VLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDL 84
V LRDGR L+G L S DQFAN VL ER+ VG Y DIP G++VIRG+NVVL+GE+D
Sbjct: 22 VFLRDGRTLIGYLRSIDQFANLVLHQTIERIHVGKQYGDIPRGIFVIRGDNVVLLGEIDE 81
Query: 85 ERDELPPHLTHVSVA---EIKRVSA 106
E+ E L VSV E++R+ A
Sbjct: 82 EK-EKDVDLEEVSVEDILEVQRIEA 105
>gi|58261498|ref|XP_568159.1| RNA cap binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115443|ref|XP_773435.1| hypothetical protein CNBI0490 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256061|gb|EAL18788.1| hypothetical protein CNBI0490 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230241|gb|AAW46642.1| RNA cap binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 135
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL +DKK+LV+LRDGRKL+G S+DQFAN +LE ER+ Y D +G+ ++
Sbjct: 10 SGSLVDLVDKKVLVILRDGRKLIGLFRSYDQFANFLLESCVERLHYKLEYADKDIGVLLV 69
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI-KRVSA 106
RGENVV +GE+DL +++ P L V+V EI +++SA
Sbjct: 70 RGENVVALGEIDLIAEDMVP-LQQVNVQEIEEKISA 104
>gi|302502174|ref|XP_003013078.1| small nuclear ribonucleoprotein Lsm8, putative [Arthroderma
benhamiae CBS 112371]
gi|291176640|gb|EFE32438.1| small nuclear ribonucleoprotein Lsm8, putative [Arthroderma
benhamiae CBS 112371]
Length = 221
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 54/71 (76%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L DKKL+++LRDGRKL+G L S+DQFAN VL+ ER+ +LY DIP G++++
Sbjct: 74 AAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANIVLQDTIERLYAENLYADIPRGVFLV 133
Query: 72 RGENVVLIGEL 82
RGENV+L+GE+
Sbjct: 134 RGENVLLLGEI 144
>gi|312084671|ref|XP_003144370.1| U6 snRNA-associated Sm-family protein LSm [Loa loa]
gi|307760468|gb|EFO19702.1| U6 snRNA-associated Sm-family protein LSm [Loa loa]
Length = 139
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Query: 8 DVYLSTSLA--SYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP 65
D YL +L+ LDKKLLV+LRDGR L+G L + DQFAN VL ER+ V Y DI
Sbjct: 5 DPYLPGALSLLEQLDKKLLVVLRDGRTLIGYLRTIDQFANLVLHETLERIHVDKYYGDIQ 64
Query: 66 LGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEI 101
G+++IRGENVVL GE+D E E L +S EI
Sbjct: 65 RGVFLIRGENVVLAGEID-ETKEQSSGLIPLSAKEI 99
>gi|302661794|ref|XP_003022560.1| small nuclear ribonucleoprotein Lsm8, putative [Trichophyton
verrucosum HKI 0517]
gi|291186512|gb|EFE41942.1| small nuclear ribonucleoprotein Lsm8, putative [Trichophyton
verrucosum HKI 0517]
Length = 221
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 54/71 (76%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L DKKL+++LRDGRKL+G L S+DQFAN VL+ ER+ +LY DIP G++++
Sbjct: 74 AAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANIVLQDTIERLYAENLYADIPRGVFLV 133
Query: 72 RGENVVLIGEL 82
RGENV+L+GE+
Sbjct: 134 RGENVLLLGEI 144
>gi|398411868|ref|XP_003857268.1| hypothetical protein MYCGRDRAFT_32304 [Zymoseptoria tritici
IPO323]
gi|339477153|gb|EGP92244.1| hypothetical protein MYCGRDRAFT_32304 [Zymoseptoria tritici
IPO323]
Length = 132
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 51/67 (76%)
Query: 25 VLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDL 84
V LRDGRKL+G L S+DQF N VL+ ER V +LY DI GL+++RGENV+L+GE+DL
Sbjct: 18 VSLRDGRKLIGVLRSWDQFGNLVLQDTIERFFVKNLYADIERGLFLVRGENVLLLGEIDL 77
Query: 85 ERDELPP 91
++D+ P
Sbjct: 78 DKDDYVP 84
>gi|403164177|ref|XP_003324247.2| hypothetical protein PGTG_05053 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164920|gb|EFP79828.2| hypothetical protein PGTG_05053 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 142
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD-LYCDIPLGLYV 70
S +L +DKK+LV LRDG+KL+G L S+DQFAN VL+ ER+ G Y DI G+Y+
Sbjct: 13 SGALVDIVDKKILVSLRDGKKLIGVLRSYDQFANLVLQDTIERIHDGICKYTDIWRGIYL 72
Query: 71 IRGENVVLIGELDLERDE 88
+RGENVVL+GE+DL++++
Sbjct: 73 VRGENVVLLGEIDLDKED 90
>gi|427786347|gb|JAA58625.1| Putative der and-387 small nuclear ribonucleoprotein splicing
factor [Rhipicephalus pulchellus]
Length = 135
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Query: 25 VLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDL 84
V LRDGR L+G L S DQFAN VL ER+ VG Y DIP G++VIRG+NVVL+GE+D
Sbjct: 22 VFLRDGRTLIGYLRSIDQFANLVLHQTIERIHVGRQYGDIPRGIFVIRGDNVVLLGEID- 80
Query: 85 ERDELPPHLTHVSVA---EIKRVSA 106
E E L VSV E++R+ A
Sbjct: 81 EDKEKDADLEEVSVEDILEVQRIEA 105
>gi|405119473|gb|AFR94245.1| RNA cap binding protein [Cryptococcus neoformans var. grubii H99]
Length = 135
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL +DKK+LV+LRDGRKL+G S+DQFAN +LE ER+ Y D +G+ ++
Sbjct: 10 SGSLVDLVDKKVLVILRDGRKLIGLFRSYDQFANFLLESCVERLHYKLEYADKDIGVLLV 69
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI-KRVSA 106
RGENVV +GE+DL +++ P L V++ EI +++SA
Sbjct: 70 RGENVVALGEIDLIAEDMVP-LQQVNLQEIEEKISA 104
>gi|116204657|ref|XP_001228139.1| hypothetical protein CHGG_10212 [Chaetomium globosum CBS 148.51]
gi|88176340|gb|EAQ83808.1| hypothetical protein CHGG_10212 [Chaetomium globosum CBS 148.51]
Length = 182
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 60/90 (66%), Gaps = 10/90 (11%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG---------DLYC 62
+ L DKKL++ LRDGRKL+G L S+DQFAN VL+ ER+ V LY
Sbjct: 46 AAQLLDLTDKKLMLALRDGRKLVGILRSWDQFANLVLQSTKERIFVPPGTAPDQVRGLYA 105
Query: 63 DIPLGLYVIRGENVVLIGELDLER-DELPP 91
D+ GL+++RGENV+L+GE+DL++ D+ PP
Sbjct: 106 DVDRGLFLVRGENVLLLGEIDLDKEDDAPP 135
>gi|340385838|ref|XP_003391415.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like
[Amphimedon queenslandica]
Length = 151
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL + +DK++LV+LR GR L+G L S DQFAN +L+ ER+ VG Y DIP G++++
Sbjct: 24 TASLIAEVDKRILVVLRGGRTLIGYLRSIDQFANLLLQDTVERIHVGKKYGDIPRGIFLV 83
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGEN+VL GE++ +E L VS+ EI
Sbjct: 84 RGENMVLCGEIEKSLEE-SMELEKVSIEEI 112
>gi|340376043|ref|XP_003386543.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like
[Amphimedon queenslandica]
Length = 151
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL + +DK++LV+LR GR L+G L S DQFAN +L+ ER+ VG Y DIP G++++
Sbjct: 24 TASLIAEVDKRILVVLRGGRTLIGYLRSIDQFANLLLQDTVERIHVGKKYGDIPRGIFLV 83
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGEN+VL GE++ +E L VS+ EI
Sbjct: 84 RGENMVLCGEIEKSLEE-SMELEKVSIEEI 112
>gi|328867402|gb|EGG15785.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 84
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 55/73 (75%)
Query: 10 YLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLY 69
+ + SL +DKKL+V+LRDG+K +G + +FDQFAN +L+ ER+ VG+ Y D LG++
Sbjct: 3 FSNASLCDEVDKKLIVVLRDGKKFIGVMRTFDQFANIILQDTVERIYVGNCYSDKYLGVF 62
Query: 70 VIRGENVVLIGEL 82
IRG+NVV++GE+
Sbjct: 63 FIRGDNVVILGEI 75
>gi|171689342|ref|XP_001909611.1| hypothetical protein [Podospora anserina S mat+]
gi|170944633|emb|CAP70744.1| unnamed protein product [Podospora anserina S mat+]
Length = 193
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 11/105 (10%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD---------LYC 62
+ L DKKL++ LRDGRKL+G L S+DQFAN VL+ ER+ V ++
Sbjct: 56 AAQLLDLTDKKLMISLRDGRKLIGILRSWDQFANLVLQSTKERIFVPPVLSEKEPTGIFA 115
Query: 63 DIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVSAL 107
DI G +++RGENV+L+GE+DL++D+ P +A+IK V L
Sbjct: 116 DIDRGTFLVRGENVLLLGEIDLDKDDDAP--PGYQLADIKMVEKL 158
>gi|392578215|gb|EIW71343.1| hypothetical protein TREMEDRAFT_60273 [Tremella mesenterica DSM
1558]
Length = 135
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL +DKK+LV+LRDGRK++G S+DQFAN ++E ER+ Y D +G+ ++
Sbjct: 10 SGSLVDLVDKKVLVILRDGRKIIGVFRSYDQFANFLMESVVERLYHKMEYADRDIGILLV 69
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEI 101
RGENVV +GE+DL ++L P L SV I
Sbjct: 70 RGENVVAVGEIDLIAEDLIP-LRETSVENI 98
>gi|365983954|ref|XP_003668810.1| hypothetical protein NDAI_0B05340 [Naumovozyma dairenensis CBS 421]
gi|343767577|emb|CCD23567.1| hypothetical protein NDAI_0B05340 [Naumovozyma dairenensis CBS 421]
Length = 183
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 66/98 (67%), Gaps = 9/98 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
G D+YL + ++ S +D+K+ VLLRDGR L G L +FDQ+AN +L+ ER+ +
Sbjct: 40 GEADLYLDQYNFTTTAAIVSSVDRKIFVLLRDGRLLFGVLRTFDQYANLILQHCVERIYL 99
Query: 58 GD--LYCDIPLGLYVIRGENVVLIGELDLERDELPPHL 93
+ Y + LG+++IRGENVV++GE+D+++++ P L
Sbjct: 100 SEENKYAEQELGIFMIRGENVVMLGEVDIDKEDQPLEL 137
>gi|190344900|gb|EDK36679.2| hypothetical protein PGUG_00777 [Meyerozyma guilliermondii ATCC
6260]
Length = 157
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 67/106 (63%), Gaps = 18/106 (16%)
Query: 1 MSWAGP--DDVYLST-------SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGA 51
M+ GP +D+YL + ++ +D+K+ VL+RDGRKL G L +FDQFAN VL+ A
Sbjct: 1 MAEPGPNVEDLYLESYAFTTAAAIVGSVDRKIFVLMRDGRKLFGILRTFDQFANLVLQDA 60
Query: 52 CERVIVGD---------LYCDIPLGLYVIRGENVVLIGELDLERDE 88
ER+ + D Y + G+++IRGENVV++GELD++ ++
Sbjct: 61 VERIYLNDENDDNSSPQRYSEAYRGVFMIRGENVVMMGELDIDTED 106
>gi|146422932|ref|XP_001487400.1| hypothetical protein PGUG_00777 [Meyerozyma guilliermondii ATCC
6260]
Length = 157
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 67/106 (63%), Gaps = 18/106 (16%)
Query: 1 MSWAGP--DDVYLST-------SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGA 51
M+ GP +D+YL + ++ +D+K+ VL+RDGRKL G L +FDQFAN VL+ A
Sbjct: 1 MAEPGPNVEDLYLESYAFTTAAAIVGSVDRKIFVLMRDGRKLFGILRTFDQFANLVLQDA 60
Query: 52 CERVIVGD---------LYCDIPLGLYVIRGENVVLIGELDLERDE 88
ER+ + D Y + G+++IRGENVV++GELD++ ++
Sbjct: 61 VERIYLNDENDDNLSPQRYSEAYRGVFMIRGENVVMMGELDIDTED 106
>gi|358389037|gb|EHK26630.1| hypothetical protein TRIVIDRAFT_50053 [Trichoderma virens Gv29-8]
Length = 169
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 11/101 (10%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV------GDLY---- 61
+ L DKKL+V+LRDGRKL+G L S+DQFAN VL+ ER+ G Y
Sbjct: 31 AAQLLDLTDKKLMVVLRDGRKLIGVLRSWDQFANIVLQSTTERIFAPRPDNPGSEYPYGY 90
Query: 62 -CDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEI 101
DI G++++RGENV+L+GE+DL++D+ P ++ E+
Sbjct: 91 FADITHGIFLVRGENVLLLGEIDLDKDDDAPPGYELAEVEV 131
>gi|299755579|ref|XP_001828752.2| hypothetical protein CC1G_06738 [Coprinopsis cinerea
okayama7#130]
gi|298411289|gb|EAU93018.2| hypothetical protein CC1G_06738 [Coprinopsis cinerea
okayama7#130]
Length = 116
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 53/69 (76%)
Query: 23 LLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGEL 82
+LV+LRDGRKL G L S+DQFAN VLE ER+ +++ + GL++IRGENVVL+GE+
Sbjct: 1 MLVVLRDGRKLHGVLRSYDQFANLVLEDTYERIYHRNMFAEQHHGLFLIRGENVVLMGEI 60
Query: 83 DLERDELPP 91
DL++++ P
Sbjct: 61 DLDKEDDVP 69
>gi|254571117|ref|XP_002492668.1| Lsm (Like Sm) protein [Komagataella pastoris GS115]
gi|238032466|emb|CAY70489.1| Lsm (Like Sm) protein [Komagataella pastoris GS115]
gi|328353325|emb|CCA39723.1| Sm-like protein LSm1 [Komagataella pastoris CBS 7435]
Length = 157
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG-DLYCDIPLGLYV 70
+ +L +DK + V LR+GR +G L +FDQFAN VL+ ER+ +G D Y + P G+++
Sbjct: 35 AAALVGSIDKIVTVTLREGRVFIGILRTFDQFANLVLQDTVERIYIGDDKYAEAPQGVFL 94
Query: 71 IRGENVVLIGELDL-ERDELPPHLTHVSVAEIKRV-SALFFSLLFLSLHKRCCLLTMRYE 128
IRGENV L+GE+DL ++D+ + + E +R+ L + + +R +L+ +E
Sbjct: 95 IRGENVSLVGEIDLDQQDKDLEKRSQIPFPEAQRIRKELVAAKQAKTTKERELMLSKGFE 154
>gi|260949273|ref|XP_002618933.1| hypothetical protein CLUG_00092 [Clavispora lusitaniae ATCC
42720]
gi|238846505|gb|EEQ35969.1| hypothetical protein CLUG_00092 [Clavispora lusitaniae ATCC
42720]
Length = 149
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 59/84 (70%), Gaps = 7/84 (8%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL-------YCDI 64
+ ++ +D+K+ VLLRDGR + G L +FDQFAN VL+ ER+ + L + ++
Sbjct: 15 AAAIVGSVDRKIFVLLRDGRNMSGILRTFDQFANLVLQDTFERIYLPKLDQNSPVRFAEV 74
Query: 65 PLGLYVIRGENVVLIGELDLERDE 88
P G++++RGENVV++GELD++R++
Sbjct: 75 PRGVFMVRGENVVMLGELDIDRED 98
>gi|389638316|ref|XP_003716791.1| hypothetical protein MGG_03195 [Magnaporthe oryzae 70-15]
gi|351642610|gb|EHA50472.1| hypothetical protein MGG_03195 [Magnaporthe oryzae 70-15]
Length = 176
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 8/75 (10%)
Query: 25 VLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD--------LYCDIPLGLYVIRGENV 76
+ LRDGRKL G L S+DQFAN VL+ ER+ V LY DI GL+++RGENV
Sbjct: 54 IALRDGRKLTGVLRSWDQFANLVLQSTVERLFVPPSPSTGERGLYADISRGLFLVRGENV 113
Query: 77 VLIGELDLERDELPP 91
+L+GE+DL++D+ PP
Sbjct: 114 LLLGEIDLDKDDDPP 128
>gi|410081531|ref|XP_003958345.1| hypothetical protein KAFR_0G01760 [Kazachstania africana CBS 2517]
gi|372464933|emb|CCF59210.1| hypothetical protein KAFR_0G01760 [Kazachstania africana CBS 2517]
Length = 180
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 9/95 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
G D+YL + ++ S +D+K+ VLLRDGR L G L +FDQ+AN +L+ ER+ +
Sbjct: 37 GEADLYLDQYNFTTTAAIVSSVDRKIFVLLRDGRLLFGVLRTFDQYANLILQHCVERIYL 96
Query: 58 GD--LYCDIPLGLYVIRGENVVLIGELDLERDELP 90
D Y + G+++IRGENVV++GE+D+++++ P
Sbjct: 97 TDENKYAEEDRGVFMIRGENVVMLGEVDIDKEDQP 131
>gi|365760012|gb|EHN01761.1| Lsm1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401839808|gb|EJT42849.1| LSM1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 172
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 63/95 (66%), Gaps = 9/95 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
G D+YL + ++ S +D+K+ VLLRDGR L G L +FDQ+AN +L+ ER+
Sbjct: 29 GEADLYLDQYNFTTTAAIVSSVDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYF 88
Query: 58 GD--LYCDIPLGLYVIRGENVVLIGELDLERDELP 90
+ Y + G+++IRGENVV++GE+D+++++ P
Sbjct: 89 SEENKYAEEDRGIFMIRGENVVMLGEVDIDKEDQP 123
>gi|401625161|gb|EJS43183.1| lsm1p [Saccharomyces arboricola H-6]
Length = 172
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 63/95 (66%), Gaps = 9/95 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
G D+YL + ++ S +D+K+ VLLRDGR L G L +FDQ+AN +L+ ER+
Sbjct: 29 GEADLYLDQYNFTTTAAIVSSVDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYF 88
Query: 58 GD--LYCDIPLGLYVIRGENVVLIGELDLERDELP 90
+ Y + G+++IRGENVV++GE+D+++++ P
Sbjct: 89 SEENKYAEEERGIFMIRGENVVMLGEVDIDKEDQP 123
>gi|290771110|emb|CAY80661.2| Lsm1p [Saccharomyces cerevisiae EC1118]
gi|323347940|gb|EGA82199.1| Lsm1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365764929|gb|EHN06447.1| Lsm1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 172
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 64/95 (67%), Gaps = 9/95 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
G D+YL + ++ S +D+K++VLLRDGR L G L +FDQ+AN +L+ ER+
Sbjct: 29 GEADLYLDQYNFTTTAAIVSSVDRKIVVLLRDGRMLFGVLRTFDQYANLILQDCVERIYF 88
Query: 58 GD--LYCDIPLGLYVIRGENVVLIGELDLERDELP 90
+ Y + G+++IRGENVV++GE+D+++++ P
Sbjct: 89 SEENKYAEEDRGIFMIRGENVVMLGEVDIDKEDQP 123
>gi|6322337|ref|NP_012411.1| Lsm1p [Saccharomyces cerevisiae S288c]
gi|1353009|sp|P47017.1|LSM1_YEAST RecName: Full=Sm-like protein LSm1; AltName: Full=SPB8 protein
gi|1008320|emb|CAA89419.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45270504|gb|AAS56633.1| YJL124C [Saccharomyces cerevisiae]
gi|151945004|gb|EDN63259.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190409383|gb|EDV12648.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|256272133|gb|EEU07133.1| Lsm1p [Saccharomyces cerevisiae JAY291]
gi|285812780|tpg|DAA08678.1| TPA: Lsm1p [Saccharomyces cerevisiae S288c]
gi|323304441|gb|EGA58212.1| Lsm1p [Saccharomyces cerevisiae FostersB]
gi|349579079|dbj|GAA24242.1| K7_Lsm1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298642|gb|EIW09739.1| Lsm1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 172
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 63/95 (66%), Gaps = 9/95 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
G D+YL + ++ S +D+K+ VLLRDGR L G L +FDQ+AN +L+ ER+
Sbjct: 29 GEADLYLDQYNFTTTAAIVSSVDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYF 88
Query: 58 GD--LYCDIPLGLYVIRGENVVLIGELDLERDELP 90
+ Y + G+++IRGENVV++GE+D+++++ P
Sbjct: 89 SEENKYAEEDRGIFMIRGENVVMLGEVDIDKEDQP 123
>gi|367017368|ref|XP_003683182.1| hypothetical protein TDEL_0H01120 [Torulaspora delbrueckii]
gi|359750846|emb|CCE93971.1| hypothetical protein TDEL_0H01120 [Torulaspora delbrueckii]
Length = 165
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 63/95 (66%), Gaps = 9/95 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
G D+YL + ++ +D+K+ VLLRDG+ L G L +FDQ+AN +LE ER+ V
Sbjct: 22 GEADLYLDQYNFTTTAAIVGSVDRKIFVLLRDGKMLFGVLRTFDQYANVILEHCVERIYV 81
Query: 58 --GDLYCDIPLGLYVIRGENVVLIGELDLERDELP 90
+ Y + GL+++RGENVV++GE+D++R++ P
Sbjct: 82 PESNQYAEETRGLFMVRGENVVMLGEVDIDREDGP 116
>gi|323308589|gb|EGA61833.1| Lsm1p [Saccharomyces cerevisiae FostersO]
Length = 143
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 63/95 (66%), Gaps = 9/95 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
G D+YL + ++ S +D+K+ VLLRDGR L G L +FDQ+AN +L+ ER+
Sbjct: 29 GEADLYLDQYNFTTTAAIVSSVDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYF 88
Query: 58 GD--LYCDIPLGLYVIRGENVVLIGELDLERDELP 90
+ Y + G+++IRGENVV++GE+D+++++ P
Sbjct: 89 SEENKYAEEDRGIFMIRGENVVMLGEVDIDKEDQP 123
>gi|442751753|gb|JAA68036.1| Putative u6 snrna-associated sm-like protein lsm1 [Ixodes ricinus]
Length = 145
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 25 VLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDL 84
V LRDGR L+G L S DQFAN VL ER+ V Y DIP G++V+RG+NVVL+GE+D
Sbjct: 32 VFLRDGRTLIGYLRSIDQFANLVLHKTIERIHVRKQYGDIPRGIFVVRGDNVVLLGEID- 90
Query: 85 ERDELPPHLTHVSVAEIKRVSALFFSLLFLSLHKRCCLLTMR 126
E E L VSV +I V L +R L R
Sbjct: 91 EAKERDVDLEEVSVEQILEVQRLEAEAKQDQERQRAKALKER 132
>gi|156044792|ref|XP_001588952.1| hypothetical protein SS1G_10500 [Sclerotinia sclerotiorum 1980]
gi|154694888|gb|EDN94626.1| hypothetical protein SS1G_10500 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 176
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 16/95 (16%)
Query: 20 DKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD-------------LYCDIPL 66
DKKL++ LRDGRKL+G L S+DQF VL+ ER+ V LY D+P
Sbjct: 46 DKKLMISLRDGRKLIGILRSWDQF---VLQSTVERIFVAPPSPSTPGAVTQPGLYADVPR 102
Query: 67 GLYVIRGENVVLIGELDLERDELPPHLTHVSVAEI 101
GL+++RGENV+L+GE+DL++D+ P + AE+
Sbjct: 103 GLFLVRGENVLLLGEIDLDKDDDAPPGYEKADAEL 137
>gi|324527990|gb|ADY48863.1| U6 snRNA-associated Sm-like protein LSm1 [Ascaris suum]
Length = 141
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 25 VLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDL 84
V+LRDGR L+G L + DQFAN VL ER+ V Y DIP G+++IRGENVVL GE+D
Sbjct: 24 VILRDGRTLIGYLRTIDQFANLVLHETLERIHVDKYYGDIPRGIFLIRGENVVLAGEIDE 83
Query: 85 ERDELPPHLTHVSVAEI 101
E+ E LT VSV EI
Sbjct: 84 EK-EKHTGLTCVSVDEI 99
>gi|402076659|gb|EJT72082.1| hypothetical protein GGTG_11329 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 190
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 50/74 (67%), Gaps = 11/74 (14%)
Query: 20 DKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG-----------DLYCDIPLGL 68
DKKL++ LRDGRKL G L S+DQFAN VL+ ER+ V LY DIP GL
Sbjct: 60 DKKLMIALRDGRKLSGVLRSWDQFANLVLQSTTERLFVPPGSTTGAPEDRGLYADIPRGL 119
Query: 69 YVIRGENVVLIGEL 82
+++RGENV+L+GE+
Sbjct: 120 FLVRGENVLLLGEI 133
>gi|323337049|gb|EGA78305.1| Lsm1p [Saccharomyces cerevisiae Vin13]
Length = 172
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 63/95 (66%), Gaps = 9/95 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
G D+YL + ++ S +D+K+ VLLRDGR L G L +FDQ+AN +L+ ER+
Sbjct: 29 GEADLYLDQYNFTTTAAIVSSVDRKIXVLLRDGRMLFGVLRTFDQYANLILQDCVERIYF 88
Query: 58 GD--LYCDIPLGLYVIRGENVVLIGELDLERDELP 90
+ Y + G+++IRGENVV++GE+D+++++ P
Sbjct: 89 SEENKYAEEDRGIFMIRGENVVMLGEVDIDKEDQP 123
>gi|323354402|gb|EGA86241.1| Lsm1p [Saccharomyces cerevisiae VL3]
Length = 167
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 63/95 (66%), Gaps = 9/95 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
G D+YL + ++ S +D+K+ VLLRDGR L G L +FDQ+AN +L+ ER+
Sbjct: 29 GEADLYLDQYNFTTTAAIVSSVDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYF 88
Query: 58 GD--LYCDIPLGLYVIRGENVVLIGELDLERDELP 90
+ Y + G+++IRGENVV++GE+D+++++ P
Sbjct: 89 SEENKYAEEDRGIFMIRGENVVMLGEVDIDKEDQP 123
>gi|323332984|gb|EGA74386.1| Lsm1p [Saccharomyces cerevisiae AWRI796]
Length = 167
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 63/95 (66%), Gaps = 9/95 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
G D+YL + ++ S +D+K+ VLLRDGR L G L +FDQ+AN +L+ ER+
Sbjct: 29 GEADLYLDQYNFTTTAAIVSSVDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYF 88
Query: 58 GD--LYCDIPLGLYVIRGENVVLIGELDLERDELP 90
+ Y + G+++IRGENVV++GE+D+++++ P
Sbjct: 89 SEENKYAEEDRGIFMIRGENVVMLGEVDIDKEDQP 123
>gi|400597652|gb|EJP65382.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 196
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 58/98 (59%), Gaps = 26/98 (26%)
Query: 21 KKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV----------------------- 57
+KL+V+LRDGRKL+G L S+DQFAN VL+ ER+
Sbjct: 51 EKLMVVLRDGRKLVGVLRSWDQFANIVLQSTTERIFALQPPSPPPTEAADSETTAAATAT 110
Query: 58 ---GDLYCDIPLGLYVIRGENVVLIGELDLERDELPPH 92
LY DI G++++RGENV+L+GE+DL+RD++PP
Sbjct: 111 TTPRGLYADIFHGIFLVRGENVLLLGEMDLDRDDIPPR 148
>gi|255716374|ref|XP_002554468.1| KLTH0F06028p [Lachancea thermotolerans]
gi|238935851|emb|CAR24031.1| KLTH0F06028p [Lachancea thermotolerans CBS 6340]
Length = 160
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 68/111 (61%), Gaps = 10/111 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
G D+YL + ++ +D+K+ VLLRDGR L G L +FDQ+AN +L+ ER+ +
Sbjct: 17 GEADLYLDQYNFTTTAAIVGSVDRKIFVLLRDGRMLFGILRTFDQYANLILQHCVERIYI 76
Query: 58 GD--LYCDIPLGLYVIRGENVVLIGELDLERDELP-PHLTHVSVAEIKRVS 105
+ Y + G++++RGENVV++GE+D++R++ P + +S E V
Sbjct: 77 TEENKYAECGRGVFMVRGENVVMLGEVDIDREDQPLSQMERISFEEASAVK 127
>gi|56753874|gb|AAW25134.1| SJCHGC05770 protein [Schistosoma japonicum]
gi|226469900|emb|CAX70231.1| LSM1 homolog, U6 small nuclear RNA associated [Schistosoma
japonicum]
gi|226469902|emb|CAX70232.1| LSM1 homolog, U6 small nuclear RNA associated [Schistosoma
japonicum]
Length = 139
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ SL + KK++V LR GR +G L DQF N VL A ER+ V + +CD+P G+ +I
Sbjct: 11 AASLIQDIGKKMVVSLRGGRMFIGFLRIIDQFGNVVLHNAVERIHVENKFCDVPQGILLI 70
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEIKRVSALFFSLLFLSLHKRCCLLTMR 126
RGEN+++IG+L+ E + + L VS EI ++ + KR L MR
Sbjct: 71 RGENIIIIGDLNPEVN-IDEKLERVSEKEIYKLQQEQTAARKELAKKRAELFAMR 124
>gi|241999432|ref|XP_002434359.1| clathrin heavy chain, putative [Ixodes scapularis]
gi|215497689|gb|EEC07183.1| clathrin heavy chain, putative [Ixodes scapularis]
Length = 459
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 25 VLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDL 84
V LRDGR L+G L S DQFAN VL ER+ V Y DIP G++V+RG+NVVL+GE+D
Sbjct: 22 VFLRDGRTLIGYLRSIDQFANLVLHKTIERIHVRKQYGDIPRGIFVVRGDNVVLLGEID- 80
Query: 85 ERDELPPHLTHVSVAEIKRVSAL 107
E E L VSV +I V L
Sbjct: 81 EAKERDVDLEEVSVEQILEVQRL 103
>gi|366990971|ref|XP_003675253.1| hypothetical protein NCAS_0B07980 [Naumovozyma castellii CBS 4309]
gi|342301117|emb|CCC68882.1| hypothetical protein NCAS_0B07980 [Naumovozyma castellii CBS 4309]
Length = 175
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 65/95 (68%), Gaps = 9/95 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
G D+YL + ++ S +D+K+ VLLRDG+ L G L +FDQ+AN +L+ ER+ +
Sbjct: 32 GEADLYLDQYNFTTTAAIVSSVDRKIFVLLRDGKLLFGILRTFDQYANLILQHCVERIYL 91
Query: 58 GD--LYCDIPLGLYVIRGENVVLIGELDLERDELP 90
+ Y + LG+++IRGENVV++GE+D+++++ P
Sbjct: 92 TEENKYAENELGIFMIRGENVVMLGEVDIDKEDKP 126
>gi|358060802|dbj|GAA93573.1| hypothetical protein E5Q_00217 [Mixia osmundae IAM 14324]
Length = 145
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI--VGDLYCDIPLGLY 69
S +L +DKK+LV+LRDGRKLMG S+DQ+AN VL E++ + +G+Y
Sbjct: 15 SGALVDTVDKKVLVVLRDGRKLMGMFRSYDQYANFVLCDTIEQIYHPESQTIAERQVGVY 74
Query: 70 VIRGENVVLIGELDLERDELPPH 92
++RGENV L+GE+DLE ++ PP
Sbjct: 75 LVRGENVALLGEIDLELEDEPPR 97
>gi|363753170|ref|XP_003646801.1| hypothetical protein Ecym_5215 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890437|gb|AET39984.1| hypothetical protein Ecym_5215 [Eremothecium cymbalariae
DBVPG#7215]
Length = 152
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 64/98 (65%), Gaps = 9/98 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
G D+YL + ++ +D+K+ VLLRDGR L G L +FDQ+AN +L+ ER+ +
Sbjct: 9 GEADLYLDQYNFTTTAAIVGSVDRKIFVLLRDGRMLFGVLRTFDQYANLILQHCVERIYI 68
Query: 58 GD--LYCDIPLGLYVIRGENVVLIGELDLERDELPPHL 93
+ Y + G++++RGENVV++GE+D+++++ P L
Sbjct: 69 TEENQYAECERGVFMVRGENVVMLGEIDIDKEDKPLEL 106
>gi|406859798|gb|EKD12861.1| LSM domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 170
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 14/91 (15%)
Query: 6 PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD------ 59
P + L DKKL+V LRDGRKL+G L S+DQFAN VL+ ER+ V
Sbjct: 23 PQMFTTAAQLLDMTDKKLMVALRDGRKLIGVLRSWDQFANLVLQSTIERIFVPPSSTPTK 82
Query: 60 --------LYCDIPLGLYVIRGENVVLIGEL 82
LY D+P G++ +RGENV+L+GE+
Sbjct: 83 PGNEYQPGLYADVPRGIFFVRGENVLLLGEI 113
>gi|403217847|emb|CCK72340.1| hypothetical protein KNAG_0J02610 [Kazachstania naganishii CBS
8797]
Length = 183
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 63/93 (67%), Gaps = 7/93 (7%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
G D+YL + ++ S +D+K+ VLLRDG+ L G L +FDQ+AN +L+ ER+ +
Sbjct: 42 GEADLYLDQYNFTTTAAIVSSVDRKIFVLLRDGKLLFGVLRTFDQYANLLLQHCVERIYL 101
Query: 58 GDLYCDIPLGLYVIRGENVVLIGELDLERDELP 90
Y + G++++RGENVV++GE+D+++++ P
Sbjct: 102 EGKYAEEDRGVFMVRGENVVMLGEVDIDKEDEP 134
>gi|448525435|ref|XP_003869115.1| Lsm1 protein [Candida orthopsilosis Co 90-125]
gi|380353468|emb|CCG22978.1| Lsm1 protein [Candida orthopsilosis]
Length = 162
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 61/92 (66%), Gaps = 10/92 (10%)
Query: 7 DDVYLST-------SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG- 58
+D+YL + ++ +D+K+ VLLRDGR G L +FDQFAN VL+ ER+ V
Sbjct: 20 EDLYLESYAFTTAAAIVGSVDRKIFVLLRDGRNFFGILRTFDQFANLVLQDTFERIYVEG 79
Query: 59 --DLYCDIPLGLYVIRGENVVLIGELDLERDE 88
+ +I G++++RGENVV++GELD++R++
Sbjct: 80 EPKKFGEIYRGVFIVRGENVVMMGELDIDRED 111
>gi|358054578|dbj|GAA99504.1| hypothetical protein E5Q_06204 [Mixia osmundae IAM 14324]
Length = 95
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLYVI 71
+SL Y+DK++LV+ DGR ++G L FDQ N +L + ERV + + ++PLGL+V+
Sbjct: 2 SSLQGYIDKRVLVITADGRTILGDLKGFDQTTNVILSDSIERVYSLEEPVEEVPLGLFVV 61
Query: 72 RGENVVLIGELDLERD 87
RG+NV L+GELD ER+
Sbjct: 62 RGDNVTLVGELDGERE 77
>gi|444319832|ref|XP_004180573.1| hypothetical protein TBLA_0D05620 [Tetrapisispora blattae CBS 6284]
gi|387513615|emb|CCH61054.1| hypothetical protein TBLA_0D05620 [Tetrapisispora blattae CBS 6284]
Length = 156
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 63/95 (66%), Gaps = 9/95 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
G D+YL + ++ +D+K+ VLLRDGR L G L +FDQ+AN +L+ ER+ +
Sbjct: 13 GEADLYLDQYNFTTTAAIVGSVDRKVFVLLRDGRMLFGVLRTFDQYANLILQHCVERIYL 72
Query: 58 G--DLYCDIPLGLYVIRGENVVLIGELDLERDELP 90
+ Y + G+++IRGENVV++GE+D+++++ P
Sbjct: 73 TKENQYSEESRGVFMIRGENVVMLGEVDIDKEDAP 107
>gi|367054976|ref|XP_003657866.1| hypothetical protein THITE_2124020 [Thielavia terrestris NRRL 8126]
gi|347005132|gb|AEO71530.1| hypothetical protein THITE_2124020 [Thielavia terrestris NRRL 8126]
Length = 179
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 9/80 (11%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG---------DLYC 62
+ L DKKL+V LRDGRKL+G L S+DQFAN VL+ ER+ V LY
Sbjct: 43 AAQLLDLTDKKLMVALRDGRKLLGILRSWDQFANLVLQSTKERIFVPPGTAPNQTRGLYA 102
Query: 63 DIPLGLYVIRGENVVLIGEL 82
DI GL+++RGENV+L+GE+
Sbjct: 103 DIDRGLFLVRGENVLLMGEI 122
>gi|254581194|ref|XP_002496582.1| ZYRO0D03432p [Zygosaccharomyces rouxii]
gi|238939474|emb|CAR27649.1| ZYRO0D03432p [Zygosaccharomyces rouxii]
Length = 185
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 62/95 (65%), Gaps = 9/95 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERV-- 55
G D+YL + ++ +D+K+ VLLRDG+ L G L +FDQ+AN +LE ER+
Sbjct: 42 GEADLYLDQYNFTTTAAIVGSVDRKVFVLLRDGKMLFGVLRTFDQYANLILEHCVERIYF 101
Query: 56 IVGDLYCDIPLGLYVIRGENVVLIGELDLERDELP 90
+ Y + GL+++RGENVV++GE+D+++++ P
Sbjct: 102 TEKNKYAEEYRGLFMVRGENVVMLGEVDIDKEDQP 136
>gi|45198309|ref|NP_985338.1| AFL212Cp [Ashbya gossypii ATCC 10895]
gi|44984196|gb|AAS53162.1| AFL212Cp [Ashbya gossypii ATCC 10895]
gi|374108566|gb|AEY97472.1| FAFL212Cp [Ashbya gossypii FDAG1]
Length = 152
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 67/109 (61%), Gaps = 10/109 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
G D+YL + ++ +D+K+ VLLRDGR L G L +FDQ+AN +L+ ER+ +
Sbjct: 9 GEADLYLDQYNFTTTAAIVGSVDRKIFVLLRDGRMLFGVLRTFDQYANLILQHCVERIYI 68
Query: 58 GD--LYCDIPLGLYVIRGENVVLIGELDLERDELP-PHLTHVSVAEIKR 103
+ Y + G++++RGENVV++GE+D+++++ P L V E R
Sbjct: 69 PEEGQYGECERGVFMVRGENVVMLGEVDIDKEDKPLEQLERVPFEEAAR 117
>gi|255723090|ref|XP_002546479.1| hypothetical protein CTRG_05957 [Candida tropicalis MYA-3404]
gi|240130996|gb|EER30558.1| hypothetical protein CTRG_05957 [Candida tropicalis MYA-3404]
Length = 168
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 65/99 (65%), Gaps = 15/99 (15%)
Query: 5 GP--DDVYLST-------SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERV 55
GP +D+YL + ++ +D+K+ VLLRDGR L G L +FDQFAN VL+ ER+
Sbjct: 19 GPNVEDLYLESYAFTTAAAIVGAVDRKIFVLLRDGRNLFGILRTFDQFANLVLQDTFERI 78
Query: 56 IVGD------LYCDIPLGLYVIRGENVVLIGELDLERDE 88
+ + + ++ G++++RGENVV++GELD++R++
Sbjct: 79 YLQEEGEAPARFGEVYRGVFMVRGENVVMMGELDIDRED 117
>gi|354545754|emb|CCE42482.1| hypothetical protein CPAR2_201250 [Candida parapsilosis]
Length = 164
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 61/92 (66%), Gaps = 10/92 (10%)
Query: 7 DDVYLST-------SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG- 58
+D+YL + ++ +D+K+ VLL+DGR G L +FDQFAN VL+ ER+ V
Sbjct: 22 EDLYLESYAFTTAAAIVGSVDRKIFVLLKDGRNFFGILRTFDQFANLVLQDTFERIYVEG 81
Query: 59 --DLYCDIPLGLYVIRGENVVLIGELDLERDE 88
+ +I G++++RGENVV++GELD++R++
Sbjct: 82 EPKKFGEIYRGVFIVRGENVVMMGELDIDRED 113
>gi|50293209|ref|XP_449016.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528329|emb|CAG61986.1| unnamed protein product [Candida glabrata]
Length = 158
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 63/95 (66%), Gaps = 9/95 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
G D+YL + ++ S +D+K+ VLLRDG+ G L +FDQ+AN +L+ ER+ V
Sbjct: 15 GEADLYLDQYNFTTTAAIVSSVDRKIFVLLRDGKLFFGVLRTFDQYANLILQDCVERIYV 74
Query: 58 GD--LYCDIPLGLYVIRGENVVLIGELDLERDELP 90
+ Y + G+++IRGENVV++GE+D+++++ P
Sbjct: 75 QENGEYAEEDRGIFMIRGENVVMLGEVDIDKEDEP 109
>gi|156846192|ref|XP_001645984.1| hypothetical protein Kpol_1031p30 [Vanderwaltozyma polyspora DSM
70294]
gi|156116655|gb|EDO18126.1| hypothetical protein Kpol_1031p30 [Vanderwaltozyma polyspora DSM
70294]
Length = 177
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 62/95 (65%), Gaps = 9/95 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERV-- 55
G D+YL + ++ +D+K+ VLLRDGR L G L +FDQ+AN +L+ ER+
Sbjct: 34 GEADLYLDQYNFTTTAAIVGSVDRKIFVLLRDGRMLFGVLRTFDQYANLILQHCVERIYF 93
Query: 56 IVGDLYCDIPLGLYVIRGENVVLIGELDLERDELP 90
+ Y + G++++RGENVV++GE+D+++++ P
Sbjct: 94 TEENKYAEEERGVFMVRGENVVMLGEVDIDKEDKP 128
>gi|219129332|ref|XP_002184845.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403630|gb|EEC43581.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 225
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 59/88 (67%), Gaps = 10/88 (11%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI---------VGDLYC 62
S SL LD+++L++LRDG+ ++GTL S+DQF+N +L ER + + Y
Sbjct: 93 SASLVEELDQRVLIVLRDGKHVVGTLVSYDQFSNLILHETVERRMKRCRETSTGIVTYYA 152
Query: 63 DIPLGLYVIRGENVVLIGELDLERDELP 90
D+PLGLYV+RG+++VL G L ++ D++P
Sbjct: 153 DVPLGLYVVRGDSIVLCGPL-VDEDDIP 179
>gi|391345950|ref|XP_003747244.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Metaseiulus occidentalis]
Length = 96
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLY 69
+++SL Y ++ + V+ DGR +GTL FDQ N +L+ + ERV V D +P+GLY
Sbjct: 1 MASSLEGYKNRLVHVVTADGRNFVGTLKGFDQTINIILQESHERVFSVQDGVQKVPMGLY 60
Query: 70 VIRGENVVLIGELDLE 85
+IRGENVVL+GELD E
Sbjct: 61 IIRGENVVLVGELDEE 76
>gi|341038886|gb|EGS23878.1| hypothetical protein CTHT_0005870 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 209
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 9/80 (11%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG---------DLYC 62
+ L DKKL+V LRDGRKL+G L S+DQFAN VL+ ER+ + LY
Sbjct: 73 AAQLLDLTDKKLMVALRDGRKLIGILRSWDQFANLVLQSTKERIFIPPNTMPNQPRGLYA 132
Query: 63 DIPLGLYVIRGENVVLIGEL 82
DI GL+++RGENV+L+GE+
Sbjct: 133 DIDRGLFLVRGENVLLLGEI 152
>gi|336468246|gb|EGO56409.1| hypothetical protein NEUTE1DRAFT_45645 [Neurospora tetrasperma FGSC
2508]
gi|350289506|gb|EGZ70731.1| Sm-like ribonucleoprotein [Neurospora tetrasperma FGSC 2509]
Length = 163
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 10/81 (12%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----------DLY 61
+ L DKKL+V LRDGRKL G L S+DQFAN VL+ ER+ V LY
Sbjct: 26 AAQLLDLTDKKLMVALRDGRKLTGILRSWDQFANLVLQQTKERIFVPPGTQSPAQTRGLY 85
Query: 62 CDIPLGLYVIRGENVVLIGEL 82
D+ GL+V+RGENV+L+GE+
Sbjct: 86 ADVDRGLFVVRGENVLLMGEI 106
>gi|367043690|ref|XP_003652225.1| hypothetical protein THITE_2087360 [Thielavia terrestris NRRL
8126]
gi|346999487|gb|AEO65889.1| hypothetical protein THITE_2087360 [Thielavia terrestris NRRL
8126]
Length = 97
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI----VGDLYCDIPLGLY 69
SL SY+DKK+ ++ DGR L+GTL + D N VL+ ERVI G+ ++PLGLY
Sbjct: 2 SLNSYVDKKVCIITTDGRNLVGTLAAHDHTTNLVLKNTVERVIRTPDEGEPSVEVPLGLY 61
Query: 70 VIRGENVVLIGELD 83
+IRGENV L+G +D
Sbjct: 62 IIRGENVCLVGLVD 75
>gi|380484749|emb|CCF39799.1| LSM domain-containing protein [Colletotrichum higginsianum]
Length = 177
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 11/82 (13%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV-----------GDL 60
+ L DKKL+V LRDGRKL+G L S+DQFAN VL+ ERV G +
Sbjct: 39 AAQLLDMTDKKLMVALRDGRKLIGVLRSWDQFANLVLQDTVERVYAYPDLEANPPREGGM 98
Query: 61 YCDIPLGLYVIRGENVVLIGEL 82
+ DI G++++RGENV+L+GE+
Sbjct: 99 FADIKRGIFLVRGENVLLLGEI 120
>gi|50309253|ref|XP_454633.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643768|emb|CAG99720.1| KLLA0E15159p [Kluyveromyces lactis]
Length = 179
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 62/95 (65%), Gaps = 9/95 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
G D+YL + ++ +D+K+ VLLRDGR G L +FDQ+AN +L+ ER+ +
Sbjct: 36 GEADLYLDQYNFTTTAAIVGSVDRKIFVLLRDGRMFFGVLRTFDQYANLILQHTVERIYI 95
Query: 58 --GDLYCDIPLGLYVIRGENVVLIGELDLERDELP 90
+ Y + G+++IRGENVV++GE+D+++++ P
Sbjct: 96 EGENKYGECDRGVFMIRGENVVMLGEVDIDKEDAP 130
>gi|448085441|ref|XP_004195860.1| Piso0_005285 [Millerozyma farinosa CBS 7064]
gi|359377282|emb|CCE85665.1| Piso0_005285 [Millerozyma farinosa CBS 7064]
Length = 180
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 81/152 (53%), Gaps = 28/152 (18%)
Query: 7 DDVYLST-------SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
+D+YL + ++ +D+K+ VLLRDGR L G L +FDQFAN V++ ER+ + D
Sbjct: 30 EDLYLESYAFTTAAAIVGSVDRKIFVLLRDGRNLFGVLRTFDQFANLVIQDTVERIYLDD 89
Query: 60 -----------LYCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVSALF 108
Y ++ G+++IRGENVV++GELD++ ++ HL + + L
Sbjct: 90 ENSDGTKDKVRRYGEVYRGVFMIRGENVVMMGELDIDTED--DHL--------QGLEQLP 139
Query: 109 FSLLFLSLHKRCCLLTMRYEIMGRSITIQFFL 140
F ++ L +R ++ + ++ Q F+
Sbjct: 140 FEVVEKELKERHAKKVKEEKLRSKKLSSQGFV 171
>gi|310796734|gb|EFQ32195.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 177
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 11/82 (13%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV-----------GDL 60
+ L DKKL+V LRDGRKL+G L S+DQFAN VL+ ER+ G L
Sbjct: 39 AAQLLDMTDKKLMVALRDGRKLIGVLRSWDQFANLVLQDTVERIYAHPDPDANPPREGGL 98
Query: 61 YCDIPLGLYVIRGENVVLIGEL 82
+ DI G++++RGENV+L+GE+
Sbjct: 99 FADIKRGIFLVRGENVLLLGEI 120
>gi|384487468|gb|EIE79648.1| U6 snRNA-associated Sm-like protein LSm1 [Rhizopus delemar RA
99-880]
Length = 68
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 47/59 (79%), Gaps = 3/59 (5%)
Query: 24 LVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGEL 82
+V+LRDGRKL+GTL SFDQF VL+ ER+ VG Y DIP G+++IRGENVVL+GE+
Sbjct: 1 MVVLRDGRKLIGTLRSFDQF---VLQDTIERIYVGQCYGDIPRGIFLIRGENVVLLGEI 56
>gi|169851696|ref|XP_001832537.1| hypothetical protein CC1G_03551 [Coprinopsis cinerea
okayama7#130]
gi|116506391|gb|EAU89286.1| hypothetical protein CC1G_03551 [Coprinopsis cinerea
okayama7#130]
Length = 95
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVI 71
+SLA Y+D++++++L+DGR ++G L FDQ +N VL + ERV D +IPLGLY++
Sbjct: 2 SSLAGYVDRRVVLILQDGRVIVGLLAGFDQKSNVVLSDSKERVFSTDEGVEEIPLGLYLV 61
Query: 72 RGENVVLIGELDLERDE 88
+G+ ++LIGELD E D+
Sbjct: 62 KGDMIILIGELDEEIDK 78
>gi|336388555|gb|EGO29699.1| hypothetical protein SERLADRAFT_378975 [Serpula lacrymans var.
lacrymans S7.9]
Length = 95
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVI 71
+SL Y+D+++L++L+DGR ++G + FDQ +N VL + ERV D +IPLGLY++
Sbjct: 2 SSLQGYVDRRVLLILQDGRSIVGIMAGFDQKSNVVLSDSKERVYSMDEGVEEIPLGLYLV 61
Query: 72 RGENVVLIGELDLERDE 88
+G+ +VLIGE+D E D+
Sbjct: 62 KGDMIVLIGEIDDEADQ 78
>gi|448080960|ref|XP_004194769.1| Piso0_005285 [Millerozyma farinosa CBS 7064]
gi|359376191|emb|CCE86773.1| Piso0_005285 [Millerozyma farinosa CBS 7064]
Length = 180
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 62/100 (62%), Gaps = 18/100 (18%)
Query: 7 DDVYLST-------SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
+D+YL + ++ +D+K+ VLLRDGR L G L +FDQFAN V++ ER+ + D
Sbjct: 30 EDLYLESYAFTTAAAIVGSVDRKIFVLLRDGRNLFGVLRTFDQFANLVIQDTVERIYLDD 89
Query: 60 -----------LYCDIPLGLYVIRGENVVLIGELDLERDE 88
Y ++ G+++IRGENVV++GELD++ ++
Sbjct: 90 ENSDGTKDKVRRYGEVYRGVFMIRGENVVMMGELDIDTED 129
>gi|302899081|ref|XP_003047975.1| hypothetical protein NECHADRAFT_100373 [Nectria haematococca mpVI
77-13-4]
gi|256728907|gb|EEU42262.1| hypothetical protein NECHADRAFT_100373 [Nectria haematococca mpVI
77-13-4]
Length = 171
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 11/82 (13%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV-----------GDL 60
+ L DKKL+V LRDGRKL+G L S+DQFAN VL+ ER+ L
Sbjct: 33 AAQLLDLTDKKLMVALRDGRKLIGVLRSWDQFANLVLQSTIERIFAPLPESAGSDQPAGL 92
Query: 61 YCDIPLGLYVIRGENVVLIGEL 82
Y DI G++++RGENV+L+GE+
Sbjct: 93 YADITHGIFLVRGENVLLLGEI 114
>gi|403160315|ref|XP_003890597.1| hypothetical protein PGTG_20884 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169505|gb|EHS63902.1| hypothetical protein PGTG_20884 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 149
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVI 71
TS+ DK++LV+ +DGR + G L FDQ N +L + ERV D ++PLGLY++
Sbjct: 56 TSIHISQDKRVLVITQDGRTITGELKGFDQTTNIILSDSVERVYSSDEPMEEVPLGLYIV 115
Query: 72 RGENVVLIGELDLERD 87
RG+++ +IGELD+E D
Sbjct: 116 RGDHISVIGELDVEAD 131
>gi|358337817|dbj|GAA36813.2| U6 snRNA-associated Sm-like protein LSm1 [Clonorchis sinensis]
Length = 137
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S SL L KK++V L GR G L DQF N VL A ER+ V +CDIP G+ +I
Sbjct: 9 SASLFHDLGKKMMVYLHGGRVYFGFLRIIDQFGNVVLHQAFERIHVDKKFCDIPQGILMI 68
Query: 72 RGENVVLIGELDLERDELPPHLTHVSVAEIKRVSA 106
RGEN++LIGE+D E + L VS EI + A
Sbjct: 69 RGENIILIGEVD-ENCNIEEQLELVSEKEIYALQA 102
>gi|50545209|ref|XP_500142.1| YALI0A16775p [Yarrowia lipolytica]
gi|49646007|emb|CAG84074.1| YALI0A16775p [Yarrowia lipolytica CLIB122]
Length = 144
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACER--VIVGDLYCDIPLGLY 69
+ +L +D+K++V LR GRK G L SFDQFAN VL+ E+ + +Y + G Y
Sbjct: 17 AAALLPVIDRKVVVTLRGGRKFFGILRSFDQFANLVLQDTYEKYFAVPEKVYGEEYRGTY 76
Query: 70 VIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVSALFFSLLFLSLHKRCCLLTMRYE 128
+IRGENV L+GE++L+ D L + E V+ + + + K+ L TM+ E
Sbjct: 77 IIRGENVELMGEVNLDED-----LAAIDYEEKNGVTVNGYKKVEFAEAKKLALKTMQKE 130
>gi|296816451|ref|XP_002848562.1| small nuclear ribonucleoprotein LSM8 [Arthroderma otae CBS
113480]
gi|238839015|gb|EEQ28677.1| small nuclear ribonucleoprotein LSM8 [Arthroderma otae CBS
113480]
Length = 98
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLY 69
SL SY++KK+LVL DGR L+GTL S DQ N VL ER+I + ++ GLY
Sbjct: 2 SLQSYINKKILVLTVDGRTLIGTLLSTDQLTNLVLSQTIERIIRTPDDPEPSSEVEHGLY 61
Query: 70 VIRGENVVLIGELDLERDE 88
+IRG+NVV+ GE+D E DE
Sbjct: 62 LIRGDNVVICGEIDEEVDE 80
>gi|390599071|gb|EIN08468.1| LSM-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 95
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVI 71
+SL Y+D+++L++L+DGR ++GTL FDQ +N VL + ER+ D ++PLGLY++
Sbjct: 2 SSLQGYVDRRVLLVLQDGRSIVGTLSGFDQKSNVVLSDSTERIYSTDEGVEEVPLGLYLV 61
Query: 72 RGENVVLIGELD 83
+G+ + LIGELD
Sbjct: 62 KGDMIALIGELD 73
>gi|68478982|ref|XP_716425.1| potential mRNA decapping complex component Lsm1 [Candida albicans
SC5314]
gi|46438093|gb|EAK97429.1| potential mRNA decapping complex component Lsm1 [Candida albicans
SC5314]
Length = 167
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 63/99 (63%), Gaps = 13/99 (13%)
Query: 3 WAGPDDVYLST-------SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERV 55
+ +D+YL + ++ +D+K+ VLL+DGR L G L +FDQFAN VL+ ER+
Sbjct: 18 FQNVEDLYLESYAFTTAAAIVGSVDRKIFVLLKDGRNLFGILRTFDQFANLVLQDTLERI 77
Query: 56 IVGD------LYCDIPLGLYVIRGENVVLIGELDLERDE 88
+G+ + + G++++RGENVV++GE+D++ ++
Sbjct: 78 YLGEEGEAPTRFSETYRGVFMVRGENVVMLGEMDIDTED 116
>gi|294655141|ref|XP_457238.2| DEHA2B06402p [Debaryomyces hansenii CBS767]
gi|199429721|emb|CAG85236.2| DEHA2B06402p [Debaryomyces hansenii CBS767]
Length = 172
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 62/103 (60%), Gaps = 11/103 (10%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD----------LY 61
+ ++ +D+K+ VLLRDGR L G L +FDQFAN VL+ ER+ + +
Sbjct: 35 AAAIVGSVDRKIFVLLRDGRNLFGILRTFDQFANLVLQDTIERIYLDSDDETDDSRPKKF 94
Query: 62 CDIPLGLYVIRGENVVLIGELDLER-DELPPHLTHVSVAEIKR 103
+ G++++RGENVV++GELD++R D+ L VS E ++
Sbjct: 95 GEAYRGVFMVRGENVVMMGELDIDREDDHLEELQQVSFEEAEK 137
>gi|342873296|gb|EGU75499.1| hypothetical protein FOXB_13986 [Fusarium oxysporum Fo5176]
Length = 169
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 11/82 (13%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD-----------L 60
+ L DKKL+V LRDGRKL+G L S+DQFAN VL+ ER+ L
Sbjct: 31 AAQLLDLTDKKLMVALRDGRKLIGVLRSWDQFANLVLQSTVERIFAPSPESAGSDRPTGL 90
Query: 61 YCDIPLGLYVIRGENVVLIGEL 82
Y DI G++++RGENV+L+GE+
Sbjct: 91 YADINHGIFLVRGENVLLLGEI 112
>gi|238880277|gb|EEQ43915.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 167
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 63/99 (63%), Gaps = 13/99 (13%)
Query: 3 WAGPDDVYLST-------SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERV 55
+ +D+YL + ++ +D+K+ VLL+DGR L G L +FDQFAN VL+ ER+
Sbjct: 18 FQNVEDLYLESYAFTTAAAIVGSVDRKIFVLLKDGRNLFGILRTFDQFANLVLQDTLERI 77
Query: 56 IVGD------LYCDIPLGLYVIRGENVVLIGELDLERDE 88
+G+ + + G++++RGENVV++GE+D++ ++
Sbjct: 78 YLGEEGEAPTRFSETYRGVFMVRGENVVMLGEMDIDTED 116
>gi|46138721|ref|XP_391051.1| hypothetical protein FG10875.1 [Gibberella zeae PH-1]
gi|408390592|gb|EKJ69984.1| hypothetical protein FPSE_09829 [Fusarium pseudograminearum CS3096]
Length = 169
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 11/82 (13%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD-----------L 60
+ L DKKL+V LRDGRKL+G L S+DQFAN VL+ ER+ L
Sbjct: 31 AAQLLDLTDKKLMVALRDGRKLIGVLRSWDQFANLVLQSTIERIFAPSPDSAGSDRPTGL 90
Query: 61 YCDIPLGLYVIRGENVVLIGEL 82
Y DI G++++RGENV+L+GE+
Sbjct: 91 YADINHGIFLVRGENVLLLGEI 112
>gi|397601577|gb|EJK57942.1| hypothetical protein THAOC_21966, partial [Thalassiosira oceanica]
Length = 306
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 20/92 (21%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV---------GD--- 59
++S+ LDK+LLV+LRDGR L+G L +FDQFAN V++ ER I+ GD
Sbjct: 165 ASSMVEQLDKRLLVILRDGRHLVGVLKTFDQFANMVMQDTAERRILVVKRADEKDGDSET 224
Query: 60 --------LYCDIPLGLYVIRGENVVLIGELD 83
DI LGL+++RG+NVVL+GE+D
Sbjct: 225 NSAPKSICYQTDIMLGLFIVRGDNVVLMGEVD 256
>gi|366998974|ref|XP_003684223.1| hypothetical protein TPHA_0B01170 [Tetrapisispora phaffii CBS 4417]
gi|357522519|emb|CCE61789.1| hypothetical protein TPHA_0B01170 [Tetrapisispora phaffii CBS 4417]
Length = 157
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 62/95 (65%), Gaps = 9/95 (9%)
Query: 5 GPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERV-- 55
G D+YL + ++ +D+K+ VLLRDGR L G L +FDQ+AN +L+ ER+
Sbjct: 14 GEADLYLDQYNFTTTAAIVGSVDRKVFVLLRDGRILFGVLRTFDQYANLILQYCVERIYF 73
Query: 56 IVGDLYCDIPLGLYVIRGENVVLIGELDLERDELP 90
+ Y + G++++RGENVV++GE+D+++++ P
Sbjct: 74 TEENKYAEELRGVFMVRGENVVMLGEVDIDKEDKP 108
>gi|429860091|gb|ELA34841.1| small nuclear ribonucleoprotein [Colletotrichum gloeosporioides
Nara gc5]
Length = 178
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 11/82 (13%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV-----------GDL 60
+ L DKKL+V LRDGRKL+G L S+DQFAN VL+ ERV L
Sbjct: 40 AAQLLDLTDKKLMVALRDGRKLIGVLRSWDQFANLVLQDTIERVFAHPDPEANPPRPSGL 99
Query: 61 YCDIPLGLYVIRGENVVLIGEL 82
+ DI G++++RGENV+L+GE+
Sbjct: 100 FADIKRGIFLVRGENVLLLGEI 121
>gi|389747909|gb|EIM89087.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 95
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVI 71
+SL Y+D+++L++L+DGR ++G + +DQ +N VL + ERV D +IPLGLY++
Sbjct: 2 SSLQGYVDRRVLLILQDGRAIVGIMAGYDQKSNVVLSDSKERVYSMDEGVEEIPLGLYLV 61
Query: 72 RGENVVLIGELDLERD 87
+G+ ++LIGE+D E+D
Sbjct: 62 KGDMIILIGEIDEEQD 77
>gi|378726968|gb|EHY53427.1| hypothetical protein HMPREF1120_01620 [Exophiala dermatitidis
NIH/UT8656]
Length = 216
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 52/100 (52%), Gaps = 34/100 (34%)
Query: 26 LLRDGRKLMGTLCSFDQFANAVLEGACERVIVG--------------------------- 58
+LRDGRK+ G L S+DQFAN VL ER V
Sbjct: 68 VLRDGRKIFGVLRSWDQFANLVLTDTRERYFVSIPAGTSPDAISATASQDAPSLSANTSL 127
Query: 59 -------DLYCDIPLGLYVIRGENVVLIGELDLERDELPP 91
+LYCDIP G Y++RGENV+L+GE+DL+R++ PP
Sbjct: 128 STATLPRNLYCDIPRGTYLVRGENVLLLGEVDLDREDDPP 167
>gi|320580108|gb|EFW94331.1| Alpha 4 subunit of the 20S proteasome [Ogataea parapolymorpha DL-1]
Length = 384
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 62/93 (66%), Gaps = 9/93 (9%)
Query: 7 DDVYLST-------SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV-G 58
+D+YL + ++ +D+K+ VLLRDGR ++G L +FDQFAN V+ ER+ + G
Sbjct: 10 EDLYLQSYSFTTTAAIIGSVDRKVFVLLRDGRSVIGVLRTFDQFANLVIHDGVERIYLDG 69
Query: 59 DLYCD-IPLGLYVIRGENVVLIGELDLERDELP 90
Y + +++IRGENVV++GELD+++++ P
Sbjct: 70 SRYGESTEPQIFLIRGENVVMMGELDIDKEDEP 102
>gi|440804396|gb|ELR25273.1| u6 snrnaassociated sm-like protein lsm8, putative [Acanthamoeba
castellanii str. Neff]
Length = 94
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 48/70 (68%)
Query: 19 LDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVL 78
+D+ + ++ D R ++GTL FDQFAN ++E + ERV +PLGLYVIRG+N+ +
Sbjct: 8 IDRTVSIITSDARSIVGTLRGFDQFANVIVEDSHERVYSAQGMEKVPLGLYVIRGDNIAV 67
Query: 79 IGELDLERDE 88
IGEL+ + D+
Sbjct: 68 IGELNEQLDK 77
>gi|324537696|gb|ADY49512.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Ascaris
suum]
Length = 98
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++ SL S+++K + V+ DGR ++G + FDQ N VLE + ERV D + IPLGLY
Sbjct: 1 MTQSLESFMNKVISVITGDGRNIVGLMKGFDQTINLVLEDSHERVFSEDAGVEQIPLGLY 60
Query: 70 VIRGENVVLIGELDLERDE 88
++RG+NV ++GELD + D+
Sbjct: 61 IVRGDNVAVVGELDEDLDK 79
>gi|429966262|gb|ELA48259.1| hypothetical protein VCUG_00300 [Vavraia culicis 'floridensis']
Length = 106
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 43/63 (68%)
Query: 18 YLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVV 77
+LD +++ L DGR + G L SFDQF N LE R+ VGD Y + LGLY+IRGEN++
Sbjct: 14 FLDNHVVIYLHDGRYMYGVLRSFDQFNNITLEQTVCRIFVGDEYAERRLGLYIIRGENII 73
Query: 78 LIG 80
LIG
Sbjct: 74 LIG 76
>gi|346470191|gb|AEO34940.1| hypothetical protein [Amblyomma maculatum]
gi|346470193|gb|AEO34941.1| hypothetical protein [Amblyomma maculatum]
gi|427786053|gb|JAA58478.1| Putative small nuclear ribonucleoprotein splicing factor
[Rhipicephalus pulchellus]
Length = 96
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%), Gaps = 4/84 (4%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++ SL Y++ + ++ DGR ++GTL FDQ N +L+ + ERV D + +PLGLY
Sbjct: 1 MAASLEGYVNHTVSIITADGRHIVGTLKGFDQTINLILDESHERVYSSDHGVEQVPLGLY 60
Query: 70 VIRGENVVLIGELDLERDELPPHL 93
++RG+NVV++G++D DEL HL
Sbjct: 61 IVRGDNVVVVGQVD---DELDMHL 81
>gi|156405763|ref|XP_001640901.1| predicted protein [Nematostella vectensis]
gi|156228037|gb|EDO48838.1| predicted protein [Nematostella vectensis]
Length = 96
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLY 69
++TSL SY++ + V+ +DGR ++GTL FDQ N +L+ + ERV G + LGLY
Sbjct: 1 MATSLESYVNHTVAVITQDGRMIVGTLKGFDQTVNVILDDSHERVFSSGSGVEQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+N+ +IGE+D E D
Sbjct: 61 IIRGDNIAVIGEIDDEVD 78
>gi|126138906|ref|XP_001385976.1| hypothetical protein PICST_68190 [Scheffersomyces stipitis CBS
6054]
gi|126093254|gb|ABN67947.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 166
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 37/164 (22%)
Query: 7 DDVYLST-------SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERV---- 55
+D+YL + ++ +D+K+ VLLRDGR L G L +FDQFAN VL+ ER+
Sbjct: 11 EDLYLESYAFTTAAAIVGSVDRKIFVLLRDGRNLFGILRTFDQFANLVLQDTVERIYLDN 70
Query: 56 ------------IVGDLYCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKR 103
I + G++++RGENVV++GELD++R++ HL AE+++
Sbjct: 71 DKKQPEPQEDGSIEQKRFGQAYRGIFMVRGENVVMMGELDIDRED--DHL-----AELQQ 123
Query: 104 VSALFFSLLFLSLHKRCCLLTMRYEIMGRSITIQFFLLHIINIF 147
+ F L K T+R E ++ + QF +IN F
Sbjct: 124 IP---FEEAEKELEKSHA-ETIRNE---KTRSKQFLAKGLINDF 160
>gi|403412868|emb|CCL99568.1| predicted protein [Fibroporia radiculosa]
Length = 95
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVI 71
SL Y+D ++L++L+DGR ++G + +DQ +N VL + ERV D +IPLGLY++
Sbjct: 2 ASLQGYVDHRILLILQDGRSIVGVMAGYDQKSNVVLSDSKERVYSADEGVEEIPLGLYLV 61
Query: 72 RGENVVLIGELDLERDE 88
+G+ +VLIGE+D D+
Sbjct: 62 KGDQIVLIGEVDEAIDQ 78
>gi|312066607|ref|XP_003136350.1| U6 snRNA-associated Sm-like protein LSm8 [Loa loa]
gi|307768477|gb|EFO27711.1| U6 snRNA-associated Sm-like protein LSm8 [Loa loa]
Length = 98
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++ +L S+++K + V+ DGR ++G + FDQ N VLE + ERV D + IPLGLY
Sbjct: 1 MTQTLESFINKVISVITGDGRNIVGLMKGFDQTINLVLEDSHERVFSEDAGVEQIPLGLY 60
Query: 70 VIRGENVVLIGELDLERDE 88
++RG+NV +IGELD + D+
Sbjct: 61 IVRGDNVAVIGELDEDLDK 79
>gi|449544647|gb|EMD35620.1| hypothetical protein CERSUDRAFT_116344 [Ceriporiopsis
subvermispora B]
Length = 95
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVI 71
SL Y+D ++L++L+DGR ++G + FDQ +N VL + ERV D +IPLGLY++
Sbjct: 2 ASLQGYVDHRVLLILQDGRAIVGVMAGFDQKSNVVLSDSKERVYSMDEGVEEIPLGLYLV 61
Query: 72 RGENVVLIGELDLERDE 88
+G+ +VLIGELD D+
Sbjct: 62 KGDQIVLIGELDDAVDQ 78
>gi|327293992|ref|XP_003231692.1| small nuclear ribonucleoprotein Lsm8 [Trichophyton rubrum CBS
118892]
gi|326466320|gb|EGD91773.1| small nuclear ribonucleoprotein Lsm8 [Trichophyton rubrum CBS
118892]
Length = 98
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLY 69
SL SY++KK+LVL DGR L+GTL S DQ N VL ER+I + ++ GLY
Sbjct: 2 SLQSYINKKILVLTVDGRTLLGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSTEVEHGLY 61
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+NVV+ GE+D E D
Sbjct: 62 LIRGDNVVICGEVDEEID 79
>gi|149235237|ref|XP_001523497.1| hypothetical protein LELG_05343 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452906|gb|EDK47162.1| hypothetical protein LELG_05343 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 186
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 8/85 (9%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV-GDLYCDIPL---- 66
+ ++ +D+K+ VLLRDGR L G L +FDQFAN VL+ ER+ + GD P
Sbjct: 51 AAAIVGSVDRKIFVLLRDGRNLFGILRTFDQFANLVLQDTFERIYLDGDENDGQPKQFGE 110
Query: 67 ---GLYVIRGENVVLIGELDLERDE 88
G++++RGENVV++GELD++ ++
Sbjct: 111 EYRGVFMVRGENVVMMGELDIDTED 135
>gi|326475823|gb|EGD99832.1| small nuclear ribonucleoprotein Lsm8 [Trichophyton tonsurans CBS
112818]
gi|326479153|gb|EGE03163.1| small nuclear ribonucleoprotein LSM8 [Trichophyton equinum CBS
127.97]
Length = 98
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLY 69
SL SY++KK+LVL DGR L+GTL S DQ N VL ER+I + ++ GLY
Sbjct: 2 SLQSYINKKILVLTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSTEVEHGLY 61
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+NVV+ GE+D E D
Sbjct: 62 LIRGDNVVICGEVDEEID 79
>gi|315050055|ref|XP_003174402.1| small nuclear ribonucleoprotein LSM8 [Arthroderma gypseum CBS
118893]
gi|311342369|gb|EFR01572.1| small nuclear ribonucleoprotein LSM8 [Arthroderma gypseum CBS
118893]
Length = 98
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLY 69
SL SY++KK+LVL DGR L+GTL S DQ N VL ER+I + ++ GLY
Sbjct: 2 SLQSYINKKILVLTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSSEVEHGLY 61
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+NVV+ GE+D E D
Sbjct: 62 LIRGDNVVICGEVDEEID 79
>gi|367020158|ref|XP_003659364.1| hypothetical protein MYCTH_2296291 [Myceliophthora thermophila
ATCC 42464]
gi|347006631|gb|AEO54119.1| hypothetical protein MYCTH_2296291 [Myceliophthora thermophila
ATCC 42464]
Length = 97
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV----GDLYCDIPLGLY 69
SL SY +KK+ ++ DGR L+GTL + D N VL+ ERVI G+ ++PLGLY
Sbjct: 2 SLNSYTEKKVCIITTDGRNLVGTLAAHDHTTNLVLKNTVERVIRSPEDGEPSVEVPLGLY 61
Query: 70 VIRGENVVLIGELD 83
++RGENV ++G +D
Sbjct: 62 IVRGENVCVVGLVD 75
>gi|395323274|gb|EJF55754.1| Sm-like ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
Length = 95
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLYVI 71
L Y+D ++L++L+DGR ++GT+ +DQ +N VL + ERV + + +IPLGLY++
Sbjct: 2 AGLQPYVDHRVLLILQDGRAIVGTMAGYDQKSNVVLSDSKERVYSIEEGVEEIPLGLYLV 61
Query: 72 RGENVVLIGELDLERDE 88
+G+ +VLIGELD D+
Sbjct: 62 KGDQIVLIGELDEATDK 78
>gi|392561866|gb|EIW55047.1| LSM-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 95
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVI 71
L SY+D+++L++L+DGR ++G + +DQ +N VL + ERV D +IPLGLY++
Sbjct: 2 AGLQSYVDQRVLLILQDGRAIVGVMAGYDQKSNVVLSDSKERVYSMDEGVEEIPLGLYLV 61
Query: 72 RGENVVLIGELDLERD 87
+G+ +VLIGE+D D
Sbjct: 62 KGDQIVLIGEVDEAAD 77
>gi|348521232|ref|XP_003448130.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Oreochromis niloticus]
gi|410918466|ref|XP_003972706.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Takifugu rubripes]
gi|432943853|ref|XP_004083300.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Oryzias latipes]
Length = 96
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
+ST+L SY+++ + ++ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MSTALESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NV +IGE+D E D
Sbjct: 61 IVRGDNVAVIGEIDEETD 78
>gi|391347595|ref|XP_003748045.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like isoform
1 [Metaseiulus occidentalis]
gi|391347597|ref|XP_003748046.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like isoform
2 [Metaseiulus occidentalis]
Length = 146
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIR 72
T+L LDK ++V+LR+ + L+G L + DQF N VL+ ER VG Y DIP G+ ++R
Sbjct: 18 TTLLDSLDKTIMVVLRNDQILIGKLRAIDQFNNLVLQYTIERPHVGKYYGDIPRGVLMVR 77
Query: 73 GENVVLIGELDLER 86
ENV L+GE D +R
Sbjct: 78 AENVQLLGEYDADR 91
>gi|409048518|gb|EKM57996.1| hypothetical protein PHACADRAFT_251944 [Phanerochaete carnosa
HHB-10118-sp]
Length = 95
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVI 71
SL Y+D ++L++L+DGR ++G + FDQ +N VL + ERV + +IPLGLY++
Sbjct: 2 ASLQGYVDHRVLLILQDGRAIVGVMAGFDQKSNVVLSDSKERVYSTEEGVEEIPLGLYLV 61
Query: 72 RGENVVLIGELDLERDE 88
+G+ +V+IGELD D+
Sbjct: 62 KGDQIVVIGELDEAADQ 78
>gi|170585854|ref|XP_001897697.1| U6 snRNA-associated Sm-like protein LSm8 [Brugia malayi]
gi|158595004|gb|EDP33581.1| U6 snRNA-associated Sm-like protein LSm8, putative [Brugia
malayi]
gi|402593521|gb|EJW87448.1| small nuclear ribonucleoprotein splicing factor [Wuchereria
bancrofti]
Length = 98
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++ +L S+++K + V+ DGR ++G + FDQ N VLE + ERV D + IPLGLY
Sbjct: 1 MTQTLDSFINKVISVITGDGRNIVGLMKGFDQTINLVLEDSHERVFSEDSGVEQIPLGLY 60
Query: 70 VIRGENVVLIGELDLERDE 88
++RG+NV +IGELD + D+
Sbjct: 61 IVRGDNVAVIGELDEDLDK 79
>gi|302680881|ref|XP_003030122.1| hypothetical protein SCHCODRAFT_16460 [Schizophyllum commune
H4-8]
gi|300103813|gb|EFI95219.1| hypothetical protein SCHCODRAFT_16460 [Schizophyllum commune
H4-8]
Length = 95
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVI 71
+SL Y+D+++L++L+DGR ++G L FDQ +N +L ERV D +IPLGLY++
Sbjct: 2 SSLQGYVDRRVLLVLQDGRTIVGVLAGFDQKSNIILSECRERVYSMDEGVEEIPLGLYIV 61
Query: 72 RGENVVLIGELDLERD 87
+G+ + LIGE+D +RD
Sbjct: 62 KGDMICLIGEIDNDRD 77
>gi|392589005|gb|EIW78336.1| Sm-like ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 95
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLYVI 71
+SL Y+D ++L++L+DGR ++G L FDQ AN VL + ERV + + +IPLGLY++
Sbjct: 2 SSLQGYVDHRVLLVLQDGRSIVGVLAGFDQKANVVLSDSKERVYSLEEGVEEIPLGLYLV 61
Query: 72 RGENVVLIGELD 83
+G+ +VLIGE+D
Sbjct: 62 KGDMIVLIGEID 73
>gi|170100064|ref|XP_001881250.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643929|gb|EDR08180.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 95
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVI 71
+SL Y+D ++L++L+DGR ++G L FDQ +N VL + ERV D +IPLGLY++
Sbjct: 2 SSLQGYVDHRVLLILQDGRAIVGVLAGFDQKSNVVLSDSKERVYSMDEGVEEIPLGLYLV 61
Query: 72 RGENVVLIGELDLERDE 88
+G+ +VLIGE+D D+
Sbjct: 62 KGDMIVLIGEIDDALDQ 78
>gi|225679568|gb|EEH17852.1| splicing factor [Paracoccidioides brasiliensis Pb03]
Length = 98
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLY 69
SL SY++KK+L+L DGR L+GTL S DQ N VL ER+I + + GLY
Sbjct: 2 SLQSYINKKVLILTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSSQVEHGLY 61
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+NVV+ GE+D E D
Sbjct: 62 LIRGDNVVICGEVDEEID 79
>gi|321255028|ref|XP_003193285.1| RNA cap binding protein [Cryptococcus gattii WM276]
gi|317459755|gb|ADV21498.1| RNA cap binding protein, putative [Cryptococcus gattii WM276]
Length = 160
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 27/121 (22%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQF-------------------------ANA 46
S SL +DKK+LV+LRDGRKL+G S+DQF AN
Sbjct: 10 SGSLVDLVDKKVLVILRDGRKLLGVFRSYDQFAFLLQPLCFDGILHILGILMQHANAANF 69
Query: 47 VLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEI-KRVS 105
+LE ER+ Y D +G+ ++RGENVV +GE+DL +++ P L V++ EI +++S
Sbjct: 70 LLESCVERLHYKLEYADKDIGVLLVRGENVVALGEIDLIAEDMVP-LQQVNLQEIEEKIS 128
Query: 106 A 106
A
Sbjct: 129 A 129
>gi|156053235|ref|XP_001592544.1| hypothetical protein SS1G_06785 [Sclerotinia sclerotiorum 1980]
gi|154704563|gb|EDO04302.1| hypothetical protein SS1G_06785 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 98
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV----GDLYCDIPLGLY 69
SL+SY++KK+L+L D R L+GTL S DQ N VL ER+I + ++P GLY
Sbjct: 2 SLSSYVNKKVLILTADSRTLVGTLLSCDQQTNLVLSQTIERIIRPPEDPEASSEVPHGLY 61
Query: 70 VIRGENVVLIGELDLERDE 88
+IRG+NVV++G +D E D+
Sbjct: 62 LIRGDNVVVVGLVDEELDD 80
>gi|154314610|ref|XP_001556629.1| predicted protein [Botryotinia fuckeliana B05.10]
gi|347831950|emb|CCD47647.1| similar to small nuclear ribonucleoprotein Lsm8 [Botryotinia
fuckeliana]
Length = 98
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLY 69
SL+SY++KK+L+L D R L+GTL S DQ N VL ER+I + ++P GLY
Sbjct: 2 SLSSYVNKKVLILTADSRTLVGTLLSCDQQTNLVLSQTIERIIRPPEDIEASSEVPHGLY 61
Query: 70 VIRGENVVLIGELDLERDE 88
+IRG+NVV++G +D E D+
Sbjct: 62 LIRGDNVVVVGLVDEELDD 80
>gi|226291299|gb|EEH46727.1| splicing factor [Paracoccidioides brasiliensis Pb18]
Length = 208
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLY 69
SL SY++KK+L+L DGR L+GTL S DQ N VL ER+I + + GLY
Sbjct: 2 SLQSYINKKVLILTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSSQVEHGLY 61
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+NVV+ GE+D E D
Sbjct: 62 LIRGDNVVICGEVDEEID 79
>gi|225708270|gb|ACO09981.1| U6 snRNA-associated Sm-like protein LSm8 [Osmerus mordax]
Length = 96
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
+ST+L +Y+++ + ++ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MSTALETYINRTVAIITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NV +IGE+D E D
Sbjct: 61 IVRGDNVAVIGEIDEETD 78
>gi|225560095|gb|EEH08377.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 98
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLY 69
SL SY++KK+L+L DGR L+GTL S DQ N VL ER+I + + GLY
Sbjct: 2 SLQSYINKKVLILTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSSQVEHGLY 61
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+NVV+ GE+D E D
Sbjct: 62 LIRGDNVVICGEVDEEID 79
>gi|225716368|gb|ACO14030.1| U6 snRNA-associated Sm-like protein LSm8 [Esox lucius]
Length = 96
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
+ST+L SY+++ + V+ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MSTALESYINRTVAVVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NV +IGE+D + D
Sbjct: 61 IVRGDNVAVIGEIDEDTD 78
>gi|326666504|ref|XP_694374.3| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary subunit
[Danio rerio]
Length = 96
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
+ST+L SY+ + + ++ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MSTALESYIHRTVAIVTSDGRMIVGTLKGFDQAINLILDESHERVFSSSQGVEQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NV +IGE+D E D
Sbjct: 61 IVRGDNVAVIGEIDEETD 78
>gi|212542651|ref|XP_002151480.1| small nuclear ribonucleoprotein Lsm8, putative [Talaromyces
marneffei ATCC 18224]
gi|210066387|gb|EEA20480.1| small nuclear ribonucleoprotein Lsm8, putative [Talaromyces
marneffei ATCC 18224]
Length = 98
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLY 69
SL+SY++KK+LV+ DGR L+GTL S DQ N VL ER+I + +I GLY
Sbjct: 2 SLSSYINKKILVITVDGRTLLGTLLSTDQLTNLVLTQTVERIIRTPEDPEPSSEIEHGLY 61
Query: 70 VIRGENVVLIGELD 83
+IRG+NVV+ GE+D
Sbjct: 62 LIRGDNVVVCGEVD 75
>gi|121701687|ref|XP_001269108.1| small nuclear ribonucleoprotein (LSM8), putative [Aspergillus
clavatus NRRL 1]
gi|119397251|gb|EAW07682.1| small nuclear ribonucleoprotein (LSM8), putative [Aspergillus
clavatus NRRL 1]
Length = 98
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLY 69
SL SY+DKK+L+L DGR L+GTL S DQ N VL ER+I + I GLY
Sbjct: 2 SLHSYIDKKVLILTVDGRTLLGTLLSTDQLTNLVLVDTIERIIRTPDDPEPSSQIEHGLY 61
Query: 70 VIRGENVVLIGELD 83
+IRG+NVVL GE+D
Sbjct: 62 LIRGDNVVLCGEID 75
>gi|452824963|gb|EME31962.1| U6 snRNA-associated Sm-like protein LSm8 [Galdieria sulphuraria]
Length = 95
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVIRG 73
L+SY+DK + V+ DGR L+G L FDQ N +LE ER+ D+ ++ +GLYV+RG
Sbjct: 4 LSSYVDKTVSVVTNDGRILIGILKGFDQSCNVILESTVERIFGTDVAMQEVAVGLYVLRG 63
Query: 74 ENVVLIGELDLERD 87
+++ ++GELD E++
Sbjct: 64 DDIAILGELDAEKE 77
>gi|242769181|ref|XP_002341717.1| small nuclear ribonucleoprotein Lsm8, putative [Talaromyces
stipitatus ATCC 10500]
gi|218724913|gb|EED24330.1| small nuclear ribonucleoprotein Lsm8, putative [Talaromyces
stipitatus ATCC 10500]
Length = 98
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLY 69
SL+SY++KK+LV+ DGR L+GTL S DQ N VL ER+I + +I GLY
Sbjct: 2 SLSSYINKKVLVITVDGRTLLGTLLSTDQLTNLVLTQTVERIIRTPDDPEPSSEIEHGLY 61
Query: 70 VIRGENVVLIGELD 83
+IRG+NVV+ GE+D
Sbjct: 62 LIRGDNVVICGEVD 75
>gi|213513122|ref|NP_001135313.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Salmo
salar]
gi|209731702|gb|ACI66720.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|209732172|gb|ACI66955.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|209732248|gb|ACI66993.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|303665717|gb|ADM16200.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
+ST+L SY+++ + ++ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MSTALESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NV +IGE+D + D
Sbjct: 61 IVRGDNVAVIGEIDEDTD 78
>gi|213404570|ref|XP_002173057.1| U6 snRNP-associated protein Lsm8 [Schizosaccharomyces japonicus
yFS275]
gi|212001104|gb|EEB06764.1| U6 snRNP-associated protein Lsm8 [Schizosaccharomyces japonicus
yFS275]
Length = 94
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIR 72
SLA ++++++ V+ DGR ++G+L FDQ N +L + ER+I D + IPLGLY+IR
Sbjct: 2 SLAEFVEQQVEVITNDGRCVLGSLRGFDQTTNLILSNSKERLISWDQETEVIPLGLYIIR 61
Query: 73 GENVVLIGELDLERD 87
GENV ++G +D + D
Sbjct: 62 GENVAMVGLVDQQLD 76
>gi|328766541|gb|EGF76595.1| hypothetical protein BATDEDRAFT_92607 [Batrachochytrium
dendrobatidis JAM81]
Length = 97
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIR 72
+ LA ++ + V+ DGR ++G L FDQ N +L A ER+ G+ D+PLGLYV+R
Sbjct: 2 SQLAPFVQNVVEVVTNDGRVILGKLEGFDQTTNLILSSAKERIFSGEGSQDLPLGLYVVR 61
Query: 73 GENVVLIGELDLERD 87
G+++ ++G +D E+D
Sbjct: 62 GDSITVVGLVDEEQD 76
>gi|119184377|ref|XP_001243108.1| hypothetical protein CIMG_07004 [Coccidioides immitis RS]
gi|303320353|ref|XP_003070176.1| LSM domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240109862|gb|EER28031.1| LSM domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320041233|gb|EFW23166.1| small nuclear ribonucleoprotein Lsm8 [Coccidioides posadasii str.
Silveira]
gi|392865995|gb|EAS31853.2| small nuclear ribonucleoprotein Lsm8 [Coccidioides immitis RS]
Length = 98
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV----GDLYCDIPLGLY 69
SL Y++KK+LVL DGR L+GTL S DQ N VL ER+I + ++ GLY
Sbjct: 2 SLQPYINKKVLVLTVDGRTLIGTLLSTDQLTNLVLSETVERIIRPPDDPEPSSEVDHGLY 61
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+NVV+ GE+D E D
Sbjct: 62 LIRGDNVVICGEIDEEVD 79
>gi|402871713|ref|XP_003899798.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Papio anubis]
Length = 96
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLY 69
++++L +Y+D+ + V+ DGR ++GTL FDQ N +L+ + ERV + LGLY
Sbjct: 1 MTSALENYVDRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVKQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERDEL 89
++RG+NV +IGE+D E D +
Sbjct: 61 IVRGDNVAVIGEIDEETDSV 80
>gi|209736546|gb|ACI69142.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
+ST+L SY+++ + ++ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MSTALESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NV +IGE+D + D
Sbjct: 61 IVRGDNVAVIGEIDEDPD 78
>gi|328859290|gb|EGG08400.1| hypothetical protein MELLADRAFT_105058 [Melampsora larici-populina
98AG31]
Length = 124
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 20 DKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVIRGENVVL 78
DK++LV+ +DGR + G L FDQ N +L + ERV D ++PLGLYV+RG+++ +
Sbjct: 38 DKRVLVITQDGRTITGDLKGFDQTTNIILSESIERVYSADEPMEEVPLGLYVVRGDHISV 97
Query: 79 IGELDLERD 87
IGELD++ D
Sbjct: 98 IGELDVDLD 106
>gi|209733618|gb|ACI67678.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
+ST+L SY+++ + + DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MSTALESYINRTVATVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NV +IGE+D + D
Sbjct: 61 IVRGDNVAVIGEIDEDTD 78
>gi|109139334|gb|ABE96774.2| U6 snRNA-associated Sm-like protein LSm8 [Bos taurus]
Length = 126
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++++L +Y+++ + V+ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 31 MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 90
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NV +IGE+D E D
Sbjct: 91 IVRGDNVAVIGEIDEETD 108
>gi|258568848|ref|XP_002585168.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906614|gb|EEP81015.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 98
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV----GDLYCDIPLGLY 69
SL +Y++KK+L+L DGR L GTL S DQ N VL ER+I + ++ GLY
Sbjct: 2 SLQAYINKKVLILTVDGRTLTGTLLSTDQLTNLVLSETVERIIRPPDDPEPSSEVDHGLY 61
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+NVV+ GE+D E D
Sbjct: 62 LIRGDNVVICGEIDEEVD 79
>gi|111226386|ref|XP_001134524.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|121962459|sp|Q1ZXD5.1|NAA38_DICDI RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=Probable U6 snRNA-associated
Sm-like protein LSm8
gi|90970532|gb|EAS66841.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 94
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L SYL K++LVL DGR ++GTL DQ N VLE ERV + IPLG+++I+G+
Sbjct: 4 LESYLKKQVLVLTADGRSIIGTLRGIDQTINVVLEKCHERVYSDEGIEVIPLGVHLIKGD 63
Query: 75 NVVLIGELDLERDE 88
+V +IGE+D E D+
Sbjct: 64 DVAVIGEVDDELDK 77
>gi|344233801|gb|EGV65671.1| Sm-like ribonucleo protein [Candida tenuis ATCC 10573]
Length = 166
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 61/102 (59%), Gaps = 17/102 (16%)
Query: 4 AGPDDVYL-------STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI 56
+ +D+YL + +L +D+K+ +LLRDGR L G L +FDQFAN VL+ ER+
Sbjct: 14 SNAEDLYLEAYAFTTAAALVGSVDRKIFLLLRDGRNLFGVLRTFDQFANLVLQDTTERIY 73
Query: 57 V---GDLYCDIPL-------GLYVIRGENVVLIGELDLERDE 88
+ G + P G++++RGENVV++G +D++ ++
Sbjct: 74 LDAEGSKSLEKPARFGETYRGVFMVRGENVVMMGAVDIDHED 115
>gi|449481053|ref|XP_004177250.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Taeniopygia guttata]
Length = 96
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++++L +Y+++ + V+ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MTSALETYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NV +IGE+D E D
Sbjct: 61 IVRGDNVAVIGEIDEETD 78
>gi|393213825|gb|EJC99320.1| Sm-like ribonucleo protein [Fomitiporia mediterranea MF3/22]
Length = 95
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLYVI 71
+SLA Y+D+++L++L+DGR ++G L FDQ ++ VL ER+ + + ++PLGLY++
Sbjct: 2 SSLAGYVDRRVLLVLQDGRTIVGVLAGFDQRSDIVLSDCVERIYSMEEGVEEVPLGLYLV 61
Query: 72 RGENVVLIGELD 83
+G+ ++LIGELD
Sbjct: 62 KGDQILLIGELD 73
>gi|440492571|gb|ELQ75126.1| Small Nuclear ribonucleoprotein splicing factor
[Trachipleistophora hominis]
Length = 106
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 18 YLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVV 77
+LD +++ L DGR + G L SFDQF N LE R+ + D Y + LGL+VIRGEN++
Sbjct: 14 FLDNHVVIYLHDGRYMYGILRSFDQFNNITLEQTVCRIFIDDEYAERRLGLHVIRGENII 73
Query: 78 LIG 80
LIG
Sbjct: 74 LIG 76
>gi|7706425|ref|NP_057284.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Homo
sapiens]
gi|19527156|ref|NP_598700.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Mus
musculus]
gi|77736425|ref|NP_001029912.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Bos taurus]
gi|157819253|ref|NP_001100055.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Rattus
norvegicus]
gi|197102128|ref|NP_001125239.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Pongo
abelii]
gi|388453491|ref|NP_001253526.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|57096120|ref|XP_532529.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 1 [Canis lupus familiaris]
gi|126340603|ref|XP_001364736.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Monodelphis domestica]
gi|194209825|ref|XP_001501036.2| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Equus caballus]
gi|291391224|ref|XP_002712161.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm8 [Oryctolagus
cuniculus]
gi|296210100|ref|XP_002751829.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Callithrix jacchus]
gi|301764070|ref|XP_002917457.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Ailuropoda melanoleuca]
gi|311275562|ref|XP_003134801.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sus scrofa]
gi|332224269|ref|XP_003261290.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Nomascus leucogenys]
gi|332869198|ref|XP_001141412.2| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Pan troglodytes]
gi|344270905|ref|XP_003407282.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Loxodonta africana]
gi|345783317|ref|XP_003432400.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Canis lupus familiaris]
gi|348578839|ref|XP_003475189.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cavia porcellus]
gi|350595285|ref|XP_003484077.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sus scrofa]
gi|395539266|ref|XP_003771593.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sarcophilus harrisii]
gi|395738892|ref|XP_003777165.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Pongo abelii]
gi|395833654|ref|XP_003789838.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Otolemur garnettii]
gi|397474452|ref|XP_003808693.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Pan paniscus]
gi|410952710|ref|XP_003983022.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Felis catus]
gi|426227909|ref|XP_004008057.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Ovis aries]
gi|426357668|ref|XP_004046156.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Gorilla gorilla gorilla]
gi|10720071|sp|O95777.3|NAA38_HUMAN RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|52783125|sp|Q6ZWM4.3|NAA38_MOUSE RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|75055136|sp|Q5RCP3.3|NAA38_PONAB RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|115312132|sp|Q3ZCE0.3|NAA38_BOVIN RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|5919157|gb|AAD56232.1|AF182294_1 U6 snRNA-associated Sm-like protein LSm8 [Homo sapiens]
gi|4309884|gb|AAD15542.1| similar to Schizosaccharomyces pombe splicing factor; similar to
PID:3395591 [Homo sapiens]
gi|12803805|gb|AAH02742.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|18044123|gb|AAH19458.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|18490261|gb|AAH22440.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|26353716|dbj|BAC40488.1| unnamed protein product [Mus musculus]
gi|51095108|gb|EAL24351.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|55727417|emb|CAH90464.1| hypothetical protein [Pongo abelii]
gi|73586551|gb|AAI02500.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Bos taurus]
gi|74198481|dbj|BAE39723.1| unnamed protein product [Mus musculus]
gi|90080802|dbj|BAE89882.1| unnamed protein product [Macaca fascicularis]
gi|119603943|gb|EAW83537.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_b [Homo sapiens]
gi|148681914|gb|EDL13861.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|149065053|gb|EDM15129.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted) [Rattus norvegicus]
gi|187469565|gb|AAI67094.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Rattus norvegicus]
gi|189065154|dbj|BAG34877.1| unnamed protein product [Homo sapiens]
gi|296488327|tpg|DAA30440.1| TPA: U6 snRNA-associated Sm-like protein LSm8 [Bos taurus]
gi|355747958|gb|EHH52455.1| hypothetical protein EGM_12900 [Macaca fascicularis]
gi|380813674|gb|AFE78711.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|383419121|gb|AFH32774.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|410208824|gb|JAA01631.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410256304|gb|JAA16119.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410288376|gb|JAA22788.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410353357|gb|JAA43282.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|431911774|gb|ELK13922.1| U6 snRNA-associated Sm-like protein LSm8 [Pteropus alecto]
gi|432103158|gb|ELK30417.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Myotis
davidii]
gi|440909990|gb|ELR59832.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Bos
grunniens mutus]
Length = 96
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++++L +Y+++ + V+ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NV +IGE+D E D
Sbjct: 61 IVRGDNVAVIGEIDEETD 78
>gi|118082191|ref|XP_416009.2| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 2 [Gallus gallus]
gi|326911334|ref|XP_003202015.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Meleagris gallopavo]
Length = 96
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++++L +Y+++ + V+ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NV +IGE+D E D
Sbjct: 61 IVRGDNVAVIGEIDEETD 78
>gi|341882643|gb|EGT38578.1| hypothetical protein CAEBREN_11633 [Caenorhabditis brenneri]
gi|341899974|gb|EGT55909.1| hypothetical protein CAEBREN_04439 [Caenorhabditis brenneri]
Length = 98
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV-GDLYCDIPLGLY 69
++++L SY+++ + V+ DGR ++G L FDQ N V+E A ER + PLGLY
Sbjct: 1 MTSTLESYMNRMVNVVTGDGRVIVGLLKGFDQLINLVIEDAHERSYSETEGVLTTPLGLY 60
Query: 70 VIRGENVVLIGELDLERDE 88
+IRGENV +IGE+D E D+
Sbjct: 61 IIRGENVAIIGEIDEELDK 79
>gi|427777815|gb|JAA54359.1| Putative der and-387 small nuclear ribonucleoprotein splicing
factor [Rhipicephalus pulchellus]
Length = 204
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 4/71 (5%)
Query: 39 SFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSV 98
S DQFAN VL ER+ VG Y DIP G++VIRG+NVVL+GE+D ++ E L VSV
Sbjct: 72 SIDQFANLVLHQTIERIHVGRQYGDIPRGIFVIRGDNVVLLGEIDEDK-EKDADLEEVSV 130
Query: 99 A---EIKRVSA 106
E++R+ A
Sbjct: 131 EDILEVQRIEA 141
>gi|308477573|ref|XP_003101000.1| CRE-LSM-8 protein [Caenorhabditis remanei]
gi|308264344|gb|EFP08297.1| CRE-LSM-8 protein [Caenorhabditis remanei]
Length = 98
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV-GDLYCDIPLGLY 69
++++L SY+++ + V+ DGR ++G L FDQ N V+E A ER + PLGLY
Sbjct: 1 MTSTLESYMNRMVNVVTGDGRIIVGLLKGFDQLINLVIEDAHERSYSETEGVLTTPLGLY 60
Query: 70 VIRGENVVLIGELDLERDE 88
+IRGENV +IGE+D E D+
Sbjct: 61 IIRGENVAIIGEIDEELDK 79
>gi|268536916|ref|XP_002633593.1| C. briggsae CBR-LSM-8 protein [Caenorhabditis briggsae]
Length = 98
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV-GDLYCDIPLGLY 69
++++L SY+++ + V+ DGR ++G L FDQ N V+E A ER D PLGLY
Sbjct: 1 MTSTLESYMNRMVNVVTGDGRVIVGLLKGFDQLINLVIEDAHERCYSETDGVLITPLGLY 60
Query: 70 VIRGENVVLIGELDLERDE 88
+IRGENV +IGE+D E D+
Sbjct: 61 IIRGENVAIIGEIDEELDK 79
>gi|355706179|gb|AES02561.1| LSM8-like protein, U6 small nuclear RNA associated [Mustela
putorius furo]
Length = 99
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++++L +Y+++ + V+ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 5 MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 64
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NV +IGE+D E D
Sbjct: 65 IVRGDNVAVIGEIDEETD 82
>gi|145349245|ref|XP_001419048.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579279|gb|ABO97341.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 97
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYV 70
+ +L + LD ++ V+ DGR ++GTL FDQ N +LE ERV + + PLG+Y+
Sbjct: 3 APTLTNMLDARVSVITNDGRHIVGTLRGFDQVTNVILEDCAERVYSSESGVEEAPLGVYM 62
Query: 71 IRGENVVLIG--------ELDLERDELPP 91
IRG+NV L+G ELDL PP
Sbjct: 63 IRGDNVALVGPVDEELDAELDLSETRAPP 91
>gi|209731758|gb|ACI66748.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
+ST+L SY+++ + ++ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MSTALESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
++ G+NVV+IGE+D + D
Sbjct: 61 IVGGDNVVVIGEIDEDTD 78
>gi|380471141|emb|CCF47424.1| LSM domain-containing protein [Colletotrichum higginsianum]
Length = 99
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI----VGDLYCDIPLGLY 69
+L YL+KK+L++ D R L+GTL + DQ N VL A ERVI G+ +PLGLY
Sbjct: 3 TLGGYLNKKVLIVTSDSRILVGTLEAADQSTNLVLSAAQERVIQTPESGEPSVQVPLGLY 62
Query: 70 VIRGENVVLIGELDLERDE 88
++RG+NV IG +D D+
Sbjct: 63 LVRGDNVCTIGLVDEALDD 81
>gi|393232628|gb|EJD40208.1| LSM-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 95
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
+SL Y+D ++ ++L DGR ++GTL +DQ +N VL + ER+ D D LGLY++
Sbjct: 2 SSLQGYVDHRVYLVLTDGRSIIGTLRGYDQKSNIVLSESVERIYSADSGVDEAQLGLYLV 61
Query: 72 RGENVVLIGELDLERDELPP 91
+G+ + LIGELD D+ P
Sbjct: 62 KGDTIALIGELDEAMDKAVP 81
>gi|147904722|ref|NP_001084715.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Xenopus
laevis]
gi|46329906|gb|AAH68881.1| MGC82379 protein [Xenopus laevis]
Length = 96
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++++L +Y+++ + V+ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MASALENYINRTVAVITADGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NV +IGE+D E D
Sbjct: 61 IVRGDNVAVIGEIDEETD 78
>gi|429848447|gb|ELA23927.1| small nuclear ribonucleoprotein lsm8 [Colletotrichum
gloeosporioides Nara gc5]
Length = 99
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 4/79 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI----VGDLYCDIPLGLY 69
+L YL+KK+L++ D R L+G L + DQ N VL A ERVI G+ ++PLGLY
Sbjct: 3 TLGGYLNKKVLIVTVDSRILVGNLEAADQNTNLVLSNAQERVIQTPESGEPSVEVPLGLY 62
Query: 70 VIRGENVVLIGELDLERDE 88
++RG+NV +G +D + DE
Sbjct: 63 LVRGDNVCTVGLVDEQLDE 81
>gi|310793932|gb|EFQ29393.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 99
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI----VGDLYCDIPLGLY 69
+L YL+KK+L++ D R L+GTL + DQ N VL A ERVI G+ +PLGLY
Sbjct: 3 TLGGYLNKKVLIVTADSRILVGTLEAADQSTNLVLSNAQERVIQTPESGEPSVQVPLGLY 62
Query: 70 VIRGENVVLIGELDLERDE 88
++RG+NV IG +D D+
Sbjct: 63 LVRGDNVCTIGLVDEALDD 81
>gi|58258887|ref|XP_566856.1| u6 snRNA-associated sm-like protein lsm8 [Cryptococcus neoformans
var. neoformans JEC21]
gi|134107025|ref|XP_777825.1| hypothetical protein CNBA5220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260523|gb|EAL23178.1| hypothetical protein CNBA5220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222993|gb|AAW41037.1| u6 snRNA-associated sm-like protein lsm8, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 95
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
S+ SY+D + V+L+DGR ++G L +D N +L + ER D + IPLGLYVI
Sbjct: 2 ASIESYVDHTVQVILQDGRVIVGKLKGYDPRTNLILSDSVEREFSMDQGVEMIPLGLYVI 61
Query: 72 RGENVVLIGELDLERD 87
+G+NV ++ ELD E+D
Sbjct: 62 KGDNVAVVAELDEEKD 77
>gi|70995556|ref|XP_752533.1| small nuclear ribonucleoprotein Lsm8 [Aspergillus fumigatus
Af293]
gi|119495627|ref|XP_001264594.1| small nuclear ribonucleoprotein (LSM8), putative [Neosartorya
fischeri NRRL 181]
gi|41581243|emb|CAE47892.1| u6 snrna-associated sm-like protein, putative [Aspergillus
fumigatus]
gi|66850168|gb|EAL90495.1| small nuclear ribonucleoprotein Lsm8, putative [Aspergillus
fumigatus Af293]
gi|119412756|gb|EAW22697.1| small nuclear ribonucleoprotein (LSM8), putative [Neosartorya
fischeri NRRL 181]
gi|159131288|gb|EDP56401.1| small nuclear ribonucleoprotein (LSM8), putative [Aspergillus
fumigatus A1163]
Length = 98
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLY 69
SL SY++KK+L+L DGR L+GTL S DQ N VL ER+I + I GLY
Sbjct: 2 SLHSYINKKVLILTVDGRTLLGTLLSTDQLTNLVLLDTIERIIRTPDDPEPSSQIEHGLY 61
Query: 70 VIRGENVVLIGELD 83
+IRG+NVVL GE+D
Sbjct: 62 LIRGDNVVLCGEVD 75
>gi|355560937|gb|EHH17623.1| hypothetical protein EGK_14070 [Macaca mulatta]
Length = 96
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLY 69
++++L +Y+++ + V+ DGR ++GTL FDQ N +L + ERV + LGLY
Sbjct: 1 MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILNESHERVFSSSQGVKQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NV +IGE+D E D
Sbjct: 61 IVRGDNVAVIGEIDEETD 78
>gi|109077418|ref|XP_001087356.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary subunit
[Macaca mulatta]
Length = 96
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLY 69
++++L +Y+++ + V+ DGR ++GTL FDQ N +L + ERV + LGLY
Sbjct: 1 MTSALENYVNRTVAVITSDGRMIVGTLKGFDQTINLILNESHERVFSSSQGVKQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERDEL 89
++RG+NV +IGE+D E D +
Sbjct: 61 IVRGDNVAVIGEIDEETDSV 80
>gi|449270863|gb|EMC81511.1| U6 snRNA-associated Sm-like protein LSm1, partial [Columba livia]
Length = 108
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 36 TLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLERDELPPHLTH 95
+LC AN VL ER+ VG Y DIP G++V+RGENVVL+GE+DLE++ P L
Sbjct: 6 SLCLLITAANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEIDLEKESDTP-LQQ 64
Query: 96 VSVAEI 101
VS+ EI
Sbjct: 65 VSIEEI 70
>gi|340914656|gb|EGS17997.1| U6 snrna-associated sm-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 98
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGL 68
++L +Y+DKK+ V+ +GR ++GTL + D N VL+GA ERVI + ++PLGL
Sbjct: 2 SALNAYIDKKVCVITIEGRTIVGTLVAHDHNTNIVLKGAVERVIRTPDDPEPSVEVPLGL 61
Query: 69 YVIRGENVVLIGELD 83
Y+IRG+ V ++G +D
Sbjct: 62 YMIRGDTVCVVGHVD 76
>gi|242207843|ref|XP_002469774.1| predicted protein [Postia placenta Mad-698-R]
gi|220731194|gb|EED85041.1| predicted protein [Postia placenta Mad-698-R]
Length = 95
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLYVI 71
SL Y+D ++L++L+DGR ++G + +DQ +N VL ERV + + +IPLGLY++
Sbjct: 2 ASLQGYVDHRVLLILQDGRAIVGVMAGYDQKSNVVLSDTKERVYSMEEGVEEIPLGLYLV 61
Query: 72 RGENVVLIGELD 83
+G+ +VLI ELD
Sbjct: 62 KGDQIVLIAELD 73
>gi|321471964|gb|EFX82935.1| hypothetical protein DAPPUDRAFT_100799 [Daphnia pulex]
Length = 96
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++++L SY+++ + V+ DGR +G L FDQ N +++ + ERV + + LGL+
Sbjct: 1 MASTLDSYVNRSVCVITSDGRNFIGILKGFDQTINLIIDDSHERVFSSTQGVEQVQLGLH 60
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+NVVLIGE+D E D
Sbjct: 61 IIRGDNVVLIGEIDNELD 78
>gi|317155545|ref|XP_003190622.1| small nuclear ribonucleoprotein (LSM8) [Aspergillus oryzae RIB40]
Length = 98
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLY 69
SL SY++KK+LVL DGR L+GTL S DQ N VL ER+I + I GLY
Sbjct: 2 SLHSYINKKVLVLTVDGRTLLGTLLSTDQLTNLVLLDTIERIIRTPDDPEPSSQIEHGLY 61
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+NVV+ GE+D + D
Sbjct: 62 LIRGDNVVVCGEVDEKID 79
>gi|149638763|ref|XP_001516404.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Ornithorhynchus anatinus]
Length = 96
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++++L +++++ + V+ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MTSALENFINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NV +IGE+D E D
Sbjct: 61 IVRGDNVAVIGEIDEETD 78
>gi|357016875|gb|AET50466.1| hypothetical protein [Eimeria tenella]
Length = 97
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-PLGLY 69
+++ L S L+ ++ VL DGR MGTL +FDQ N VL E+V+ D +I PLGLY
Sbjct: 1 MASGLQSLLEHRVCVLTFDGRLFMGTLIAFDQSTNIVLNKCAEKVVHEDAPVEIVPLGLY 60
Query: 70 VIRGENVVLIGELD 83
++RG+N+ ++G++D
Sbjct: 61 LLRGDNIAVVGQVD 74
>gi|17544148|ref|NP_500964.1| Protein LSM-8 [Caenorhabditis elegans]
gi|351059336|emb|CCD74179.1| Protein LSM-8 [Caenorhabditis elegans]
Length = 98
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV-GDLYCDIPLGLY 69
++++L +Y+++ + V+ DGR ++G L FDQ N V+E A ER + PLGLY
Sbjct: 1 MTSTLDAYMNRMVNVVTGDGRVIVGLLKGFDQLINLVIEDAHERSYSETEGVLTTPLGLY 60
Query: 70 VIRGENVVLIGELDLERDE 88
+IRGENV +IGE+D E D+
Sbjct: 61 IIRGENVAIIGEIDEELDK 79
>gi|156083833|ref|XP_001609400.1| U6 snRNA-associated Sm-like protein LSm8 [Babesia bovis T2Bo]
gi|154796651|gb|EDO05832.1| U6 snRNA-associated Sm-like protein LSm8, putative [Babesia
bovis]
Length = 94
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLY 69
++ SL +++ ++ V+ DGR +G L FDQ N VL ERV G + D+PLG+Y
Sbjct: 1 MAPSLEQFIECQVCVVTVDGRVFIGDLKGFDQVTNLVLYNCVERVFRKGVPFEDLPLGIY 60
Query: 70 VIRGENVVLIGELDLERDE 88
+IRG+N+ L+GE+D+E D+
Sbjct: 61 LIRGDNIALVGEVDMEVDK 79
>gi|426195314|gb|EKV45244.1| hypothetical protein AGABI2DRAFT_194226 [Agaricus bisporus var.
bisporus H97]
Length = 95
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVI 71
+SL Y+D+++L++L+DGR ++G + FDQ +N VL ERV D +I LGLY++
Sbjct: 2 SSLQGYVDRRVLLVLQDGRAIVGVMAGFDQRSNIVLSDCKERVFSMDEGVEEIALGLYLV 61
Query: 72 RGENVVLIGELDLERD 87
+G+ + LIGELD E D
Sbjct: 62 KGDMISLIGELDEEID 77
>gi|409076971|gb|EKM77339.1| hypothetical protein AGABI1DRAFT_115264 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 95
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVI 71
+SL Y+D+++L++L+DGR ++G + FDQ +N VL ERV D +I LGLY++
Sbjct: 2 SSLQGYVDRRVLLVLQDGRAIVGVMAGFDQRSNIVLSDCKERVFSMDEGVEEIALGLYLV 61
Query: 72 RGENVVLIGELDLERD 87
+G+ + LIGELD E D
Sbjct: 62 KGDMISLIGELDEEID 77
>gi|224164763|ref|XP_002189792.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Taeniopygia guttata]
Length = 96
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++++L +Y+++ + V+ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MTSALETYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
+ RG+NV +IGE+D E D
Sbjct: 61 IERGDNVAVIGEIDEETD 78
>gi|261203457|ref|XP_002628942.1| small nuclear ribonucleoprotein Lsm8 [Ajellomyces dermatitidis
SLH14081]
gi|239586727|gb|EEQ69370.1| small nuclear ribonucleoprotein Lsm8 [Ajellomyces dermatitidis
SLH14081]
gi|239608242|gb|EEQ85229.1| small nuclear ribonucleoprotein Lsm8 [Ajellomyces dermatitidis
ER-3]
gi|327349430|gb|EGE78287.1| small nuclear ribonucleoprotein Lsm8 [Ajellomyces dermatitidis
ATCC 18188]
Length = 98
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLY 69
SL Y++KK+++L DGR L+GTL S DQ N VL ER+I + + GLY
Sbjct: 2 SLQYYINKKVIILTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSSQVEHGLY 61
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+NVV+ GE+D E D
Sbjct: 62 LIRGDNVVICGEVDEEID 79
>gi|339248315|ref|XP_003375791.1| putative LSM domain protein [Trichinella spiralis]
gi|316970790|gb|EFV54665.1| putative LSM domain protein [Trichinella spiralis]
Length = 184
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++ +L +L+K + ++ DGR ++G + FDQ N VLE + ERV + + +PLGLY
Sbjct: 88 MAAALEPFLEKLVSIITGDGRHIVGIMKGFDQTINLVLEDSHERVYSMNHGVEQVPLGLY 147
Query: 70 VIRGENVVLIGELDLERDE 88
VIRGEN+ ++GE+D + D+
Sbjct: 148 VIRGENIAVVGEIDEDLDK 166
>gi|281346897|gb|EFB22481.1| hypothetical protein PANDA_005488 [Ailuropoda melanoleuca]
Length = 96
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 43 FANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEI 101
AN VL ER+ VG Y DIP G++V+RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 1 IANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEIDLEKESDTP-LQQVSIEEI 58
>gi|378729237|gb|EHY55696.1| hypothetical protein HMPREF1120_03821 [Exophiala dermatitidis
NIH/UT8656]
Length = 98
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV----GDLYCDIPLGLY 69
SL +Y+DKK+LV+ DGR L+GTL S DQ N VL ER+I + + GLY
Sbjct: 2 SLQTYIDKKVLVITVDGRTLVGTLLSCDQVTNIVLNDTVERIIRPTDDPEPSSQVSHGLY 61
Query: 70 VIRGENVVLIGELDLERD 87
++RG+N+ ++G +D E D
Sbjct: 62 LVRGDNITIVGLVDEELD 79
>gi|402469076|gb|EJW04137.1| hypothetical protein EDEG_01573 [Edhazardia aedis USNM 41457]
Length = 105
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ YLD+ +++L+ +G+ L G L SFDQ+ + LE ERV Y + GLY++
Sbjct: 13 TRDFEEYLDRDVVILMWEGKYLYGKLRSFDQYNSITLENTIERVFNNGKYTERKCGLYIV 72
Query: 72 RGENVVLIG 80
RGEN+V+IG
Sbjct: 73 RGENIVIIG 81
>gi|378754575|gb|EHY64606.1| hypothetical protein NERG_02416 [Nematocida sp. 1 ERTm2]
Length = 109
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
+ YLDK + V++RDG+ ++GTL S+DQ+ N +LE + E Y I ++RGE
Sbjct: 14 MEEYLDKPIFVVMRDGKYMVGTLRSYDQYYNILLEDSTEYTTSSTEYSSIESESVLLRGE 73
Query: 75 NVVLIGELDLERDELP--PHLTH 95
N++L+GE +E+ P +T
Sbjct: 74 NIILLGEGTFSHEEMEKVPEITE 96
>gi|209731736|gb|ACI66737.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
+ST+L SY ++ + ++ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MSTALESYTNRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NV +IGE+ + D
Sbjct: 61 IVRGDNVAVIGEIGEDTD 78
>gi|19076009|ref|NP_588509.1| U6 snRNP-associated protein Lsm8 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|59799781|sp|O74483.1|LSM8_SCHPO RecName: Full=U6 snRNA-associated Sm-like protein LSm8
gi|3395591|emb|CAA20133.1| U6 snRNP-associated protein Lsm8 (predicted) [Schizosaccharomyces
pombe]
Length = 94
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 11/93 (11%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIR 72
SLA ++++++ V+ DGR ++G+L FD N +L + ER+I D + IPLG+Y++R
Sbjct: 2 SLADFMEQRVQVITNDGRVVLGSLKGFDHTTNLILSDSFERIISMDQDMETIPLGVYLLR 61
Query: 73 GENVVLIG----ELDLE------RDELPPHLTH 95
GENV ++G ELD E R E P + H
Sbjct: 62 GENVAMVGLVNEELDSEIEWTKIRGEAIPDVVH 94
>gi|260814225|ref|XP_002601816.1| hypothetical protein BRAFLDRAFT_279155 [Branchiostoma floridae]
gi|229287118|gb|EEN57828.1| hypothetical protein BRAFLDRAFT_279155 [Branchiostoma floridae]
Length = 96
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLY 69
++ +L Y++K + V+ DGR ++GTL FDQ N +L+ + ERV G + LGLY
Sbjct: 1 MANALEDYVNKTVSVITSDGRMIVGTLKGFDQTTNLILDESHERVFSSGQGVEQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERDELPPHLTHVSV 98
+IRG+N+ ++GE+D D++ L V++
Sbjct: 61 IIRGDNIAVVGEID---DDIDTRLDMVNI 86
>gi|333449461|gb|AEF33416.1| U6 snRNA-associated Sm-like protein LSm8 [Crassostrea ariakensis]
Length = 96
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
+S++L SY+++ + ++ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MSSALESYVNRTVSIVTADGRIIVGTLKGFDQTINLILDESHERVFSTTQGVEQVILGLY 60
Query: 70 VIRGENVVLIGELDLERDE 88
+IRG+NV +IGE+D + D
Sbjct: 61 IIRGDNVAVIGEIDDDADN 79
>gi|340369040|ref|XP_003383057.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Amphimedon queenslandica]
Length = 97
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
+S+ Y+++ + ++ DGR ++GTL FDQ N +L + ERV + + LGLY+I
Sbjct: 4 SSIEPYVNRSVSIITGDGRVIVGTLKGFDQTVNIILSNSHERVYSSSSGVEQVQLGLYII 63
Query: 72 RGENVVLIGELDLERD 87
RG+N+ +IGELD E D
Sbjct: 64 RGDNIAVIGELDEELD 79
>gi|401826479|ref|XP_003887333.1| LSM domain-containing protein [Encephalitozoon hellem ATCC 50504]
gi|392998492|gb|AFM98352.1| LSM domain-containing protein [Encephalitozoon hellem ATCC 50504]
Length = 107
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 6 PD-DVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI 64
PD D + YL+++++V+LRDGR L G + SFDQF + L+G ER+ Y +
Sbjct: 2 PDEDFGNARDYEKYLEQEVVVMLRDGRYLYGIMKSFDQFNSITLDGVIERIFHDGKYAER 61
Query: 65 PLGLYVIRGENVVLIG 80
L++IRGEN+ +IG
Sbjct: 62 KHELFIIRGENITMIG 77
>gi|449304976|gb|EMD00983.1| hypothetical protein BAUCODRAFT_118700 [Baudoinia compniacensis
UAMH 10762]
Length = 98
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI--VGDLYCDI--PLGLY 69
SL SYL+KK+ ++ DGR L GTL S DQ N VL+ ER+I D I P GLY
Sbjct: 2 SLNSYLNKKVCIITVDGRTLTGTLVSCDQVTNVVLKDTIERIIRPTDDEEPSIEQPHGLY 61
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NVV+ G +D E D
Sbjct: 62 LVRGDNVVICGLVDEELD 79
>gi|47210706|emb|CAF89998.1| unnamed protein product [Tetraodon nigroviridis]
Length = 99
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 11 LSTSLASYLDKK---LLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPL 66
+ST+L SY+++ + ++ DGR ++GTL FDQ N +L+ + ERV + + L
Sbjct: 1 MSTALESYINRDSGTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVL 60
Query: 67 GLYVIRGENVVLIGELDLERD 87
GLY++RG+NV +IGE+D E D
Sbjct: 61 GLYIVRGDNVAVIGEIDEETD 81
>gi|303389423|ref|XP_003072944.1| U6 snRNA-associated small Sm-like ribonucleoprotein
[Encephalitozoon intestinalis ATCC 50506]
gi|303302087|gb|ADM11584.1| U6 snRNA-associated small Sm-like ribonucleoprotein
[Encephalitozoon intestinalis ATCC 50506]
Length = 109
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 7 DDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPL 66
+D + YL+++++V+LRDGR L G + SFDQF + L+ ER+ Y +
Sbjct: 4 EDFDNTRDYEKYLEQEVVVMLRDGRYLYGVMKSFDQFNSITLDKVIERIFHDGKYGERKH 63
Query: 67 GLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIK 102
L+++RGEN+ +IG L+ E+ LT V+ +++
Sbjct: 64 ELFIVRGENITMIG---LKSPEIAEELTQVNFWDLR 96
>gi|405117913|gb|AFR92688.1| hypothetical protein CNAG_00557 [Cryptococcus neoformans var.
grubii H99]
Length = 95
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
S+ SY+D + V+L+DGR ++G L +D N +L + ER + + IPLGLYVI
Sbjct: 2 ASIESYVDHTVQVILQDGRIIVGKLKGYDPRTNLILSDSVEREFSMEQGVEMIPLGLYVI 61
Query: 72 RGENVVLIGELDLERD 87
+G+NV ++ ELD E+D
Sbjct: 62 KGDNVAVVAELDEEKD 77
>gi|19173671|ref|NP_597474.1| U6 snRNA-ASSOCIATED SMALL RIBONUCLEOPROTEIN (Sm-LIKE PROTEIN)
[Encephalitozoon cuniculi GB-M1]
gi|19170877|emb|CAD26651.1| U6 snRNA-ASSOCIATED SMALL RIBONUCLEOPROTEIN (Sm-LIKE PROTEIN)
[Encephalitozoon cuniculi GB-M1]
gi|449329221|gb|AGE95495.1| U6 snRNA-associated small ribonucleoprotein [Encephalitozoon
cuniculi]
Length = 102
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ YL+++++V+LRDGR L G + SFDQF + L+G ER+ Y + L++I
Sbjct: 9 TRDYEKYLEQEVVVMLRDGRYLYGVMKSFDQFNSVTLDGVIERIFHDTRYAERRHELFII 68
Query: 72 RGENVVLIG 80
RGEN+ +IG
Sbjct: 69 RGENITMIG 77
>gi|321249860|ref|XP_003191600.1| u6 snRNA-associated sm-like protein lsm8 [Cryptococcus gattii
WM276]
gi|317458067|gb|ADV19813.1| u6 snRNA-associated sm-like protein lsm8, putative [Cryptococcus
gattii WM276]
Length = 95
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
S+ SY+D + V+L+DGR ++G L +D N +L + ER + + +PLGLYVI
Sbjct: 2 ASIESYVDHTVQVILQDGRVIVGKLKGYDPRTNLILSDSVEREFSMEQGVEMVPLGLYVI 61
Query: 72 RGENVVLIGELDLERD 87
+G+NV ++ ELD E+D
Sbjct: 62 KGDNVAVVAELDEEKD 77
>gi|291238793|ref|XP_002739308.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm8-like
[Saccoglossus kowalevskii]
Length = 96
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++++L Y++ + V+ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MASALEGYINHTISVVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+N+ ++GE+D E D
Sbjct: 61 IIRGDNIAVVGEIDDETD 78
>gi|115491675|ref|XP_001210465.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114197325|gb|EAU39025.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 98
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLY 69
SL +Y++KK+L+L DGR L+GTL S DQ N VL ER+I + I GLY
Sbjct: 2 SLNAYINKKVLILTVDGRTLLGTLLSTDQLTNLVLLDTIERIIRTPDDPEPSSQIEHGLY 61
Query: 70 VIRGENVVLIGELD 83
+IRG+NVV+ GE+D
Sbjct: 62 LIRGDNVVVCGEVD 75
>gi|209738386|gb|ACI70062.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
+ST+L SY+++ + ++ DGR ++GTL FDQ N +L+ + E V + + LGLY
Sbjct: 1 MSTALESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHECVFSSSQGVEQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NV +IGE+D + D
Sbjct: 61 IVRGDNVAVIGEIDEDTD 78
>gi|307111678|gb|EFN59912.1| hypothetical protein CHLNCDRAFT_132948 [Chlorella variabilis]
Length = 101
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS G D LA Y+D + V+ DGR ++GTL +DQ N +L+ ERV
Sbjct: 1 MSAPGGD-----AGLAQYVDTTVSVITNDGRTIVGTLRGYDQATNLILDECHERVYSSKN 55
Query: 61 YCD-IPLGLYVIRGENVVLIGELDLERD 87
+ + LGLYVIRG+N+ +IGE+D ++D
Sbjct: 56 GVEQLVLGLYVIRGDNIAVIGEIDDDKD 83
>gi|307203833|gb|EFN82769.1| U6 snRNA-associated Sm-like protein LSm8 [Harpegnathos saltator]
Length = 96
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
+++ L SY++ + V+ DGR +GTL FDQ N +L+ + ERV + + LGL+
Sbjct: 1 MASGLESYVNHTVSVITSDGRNFIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLH 60
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+N+ ++GELD E D
Sbjct: 61 IIRGDNIAIVGELDDEMD 78
>gi|66533783|ref|XP_624537.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Apis mellifera]
gi|340726388|ref|XP_003401541.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Bombus terrestris]
gi|350423978|ref|XP_003493651.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Bombus impatiens]
gi|380024341|ref|XP_003695959.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Apis florea]
gi|383847985|ref|XP_003699633.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Megachile rotundata]
Length = 96
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
+++ L SY++ + ++ DGR +GTL FDQ N +L+ + ERV + + LGL+
Sbjct: 1 MASGLESYVNHTVSIITSDGRNFIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLH 60
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+NV ++GELD E D
Sbjct: 61 IIRGDNVAIVGELDDEMD 78
>gi|156551834|ref|XP_001604291.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Nasonia vitripennis]
Length = 96
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
+++ L SY++ + ++ DGR +GTL FDQ N +L+ + ERV + + LGL+
Sbjct: 1 MASGLESYVNHTVSIITSDGRNFIGTLKGFDQTINLILDESHERVYSTTQGVEQVVLGLH 60
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+NV +IGELD E D
Sbjct: 61 IIRGDNVAVIGELDDEMD 78
>gi|145239729|ref|XP_001392511.1| small nuclear ribonucleoprotein (LSM8) [Aspergillus niger CBS
513.88]
gi|134077023|emb|CAK39897.1| unnamed protein product [Aspergillus niger]
gi|350629638|gb|EHA18011.1| hypothetical protein ASPNIDRAFT_38383 [Aspergillus niger ATCC
1015]
Length = 98
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLY 69
SL SY++KK+ +L DGR L+GTL S DQ N VL ER+I + I GLY
Sbjct: 2 SLHSYINKKVCILTVDGRTLLGTLLSTDQLTNLVLLDTIERIIRTPDDPEPSSQIEHGLY 61
Query: 70 VIRGENVVLIGELD 83
+IRG+NVVL GE+D
Sbjct: 62 LIRGDNVVLCGEVD 75
>gi|322784412|gb|EFZ11383.1| hypothetical protein SINV_13023 [Solenopsis invicta]
Length = 102
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
+++ L SY++ + ++ DGR +GTL FDQ N +L+ + ERV + + LGL+
Sbjct: 7 MASGLESYVNHTVSIITSDGRNFIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLH 66
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+NV ++GELD E D
Sbjct: 67 IIRGDNVAIVGELDDEMD 84
>gi|301610947|ref|XP_002935003.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like, partial [Xenopus (Silurana) tropicalis]
Length = 89
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 18 YLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRGENV 76
YL++ + V+ DGR ++GTL FDQ N +L+ + ERV + + LGLY++RG+NV
Sbjct: 1 YLNRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNV 60
Query: 77 VLIGELDLERD 87
+IGE+D E D
Sbjct: 61 AVIGEIDEETD 71
>gi|357132320|ref|XP_003567778.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Brachypodium distachyon]
Length = 99
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 8/88 (9%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGD 59
M+ AGP +L S +D+ + V+ DGR ++GTL FDQ N +L+ + ERV +
Sbjct: 1 MASAGP-------TLESLVDQVISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTKE 53
Query: 60 LYCDIPLGLYVIRGENVVLIGELDLERD 87
+ LGLY+IRG+N+ ++GE+D E D
Sbjct: 54 GVQQLVLGLYIIRGDNIGVVGEVDEELD 81
>gi|297682708|ref|XP_002819054.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Pongo abelii]
Length = 99
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 44 ANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEI 101
N VL ER+ VG Y DIP G++V+RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 5 PNLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEIDLEKESDTP-LQQVSIEEI 61
>gi|330842842|ref|XP_003293378.1| hypothetical protein DICPUDRAFT_90215 [Dictyostelium purpureum]
gi|325076293|gb|EGC30091.1| hypothetical protein DICPUDRAFT_90215 [Dictyostelium purpureum]
Length = 94
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L +L KK+LVL DGR ++G L DQ N +LE ERV + IPLG+++I+G+
Sbjct: 4 LEPFLKKKVLVLTADGRNIIGILRGTDQTTNVILEKCEERVFSDEGIEVIPLGVHLIKGD 63
Query: 75 NVVLIGELDLERD 87
+V +IGE+D E D
Sbjct: 64 DVAVIGEVDEELD 76
>gi|294955662|ref|XP_002788617.1| small nuclear ribonucleoprotein U6, putative [Perkinsus marinus
ATCC 50983]
gi|239904158|gb|EER20413.1| small nuclear ribonucleoprotein U6, putative [Perkinsus marinus
ATCC 50983]
Length = 137
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 32 KLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELD 83
KL+G L ++DQF N VL+ ER + LY DI LG+ +IRGEN+VL GE+D
Sbjct: 44 KLIGWLKTYDQFGNIVLQNTLERHVADGLYADIDLGIMIIRGENIVLFGEVD 95
>gi|443702849|gb|ELU00673.1| hypothetical protein CAPTEDRAFT_206003 [Capitella teleta]
Length = 96
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV-GDLYCDIPLGLY 69
+S+SL S++ ++ V+ DGR + G + FDQ N +L+ + ERV G ++ LGLY
Sbjct: 1 MSSSLESFVGHQVSVITADGRVINGVMKGFDQAINLILDESHERVYSSGGGVEEVILGLY 60
Query: 70 VIRGENVVLIGELDLERDE 88
+IRG+NV +IGE+D E D+
Sbjct: 61 IIRGDNVAIIGEVDEELDK 79
>gi|193716261|ref|XP_001944890.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Acyrthosiphon pisum]
Length = 96
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
+S+ L SY++ + ++ DGR +GTL FDQ N +L+ + ERV + + I LGL+
Sbjct: 1 MSSGLESYVNHTVSIITSDGRNFVGTLKGFDQTINIILDDSHERVYSPNQGVEQIILGLH 60
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+NV +IGE+D D
Sbjct: 61 LIRGDNVAIIGEVDETMD 78
>gi|332024909|gb|EGI65097.1| U6 snRNA-associated Sm-like protein LSm8 [Acromyrmex echinatior]
Length = 96
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
+++ L SY++ + ++ DGR +GTL FDQ N +L+ + ERV + + LGL+
Sbjct: 1 MASGLESYVNHTVSIITSDGRNFIGTLKGFDQTINLILDESHERVYSTTQGVEQVVLGLH 60
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+NV ++GE+D E D
Sbjct: 61 IIRGDNVAIVGEIDDEMD 78
>gi|443897860|dbj|GAC75199.1| hypothetical protein PANT_14d00082 [Pseudozyma antarctica T-34]
Length = 160
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVI 71
++L Y+D+++LV+ +DGR ++GTL D + +L + ER+ D ++PLGLY++
Sbjct: 2 SALQQYVDQRVLVITQDGRVIVGTLRGSDAVGSIILAASVERIFSPDEGVEEVPLGLYIL 61
Query: 72 RGENVVLIGELDLERDE 88
RG+ + L+G +D+E+D+
Sbjct: 62 RGDAICLVGLVDVEKDK 78
>gi|242002636|ref|XP_002435961.1| small nuclear ribonucleoprotein (snRNP) splicing factor [Ixodes
scapularis]
gi|215499297|gb|EEC08791.1| small nuclear ribonucleoprotein (snRNP) splicing factor [Ixodes
scapularis]
gi|442754057|gb|JAA69188.1| Putative small nuclear ribonucleoprotein snrnp splicing factor
[Ixodes ricinus]
gi|442754059|gb|JAA69189.1| Putative small nuclear ribonucleoprotein snrnp splicing factor
[Ixodes ricinus]
Length = 96
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++++L +Y++ + ++ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MASALENYVNHTVSIITADGRHIVGTLKGFDQTINLILDESHERVYSSAHGVEQVLLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NVVL+G++D E D
Sbjct: 61 IVRGDNVVLVGQVDDELD 78
>gi|224059783|ref|XP_002299990.1| predicted protein [Populus trichocarpa]
gi|118484411|gb|ABK94082.1| unknown [Populus trichocarpa]
gi|222847248|gb|EEE84795.1| predicted protein [Populus trichocarpa]
Length = 98
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLY 69
+ T L S +D+ + ++ DGR ++G L FDQ N +L+ + ERV + + LGLY
Sbjct: 3 IGTGLESLVDQTISIITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLY 62
Query: 70 VIRGENVVLIGELDLERDELPPHL 93
+IRG+N+ ++GELD +EL HL
Sbjct: 63 IIRGDNIGVVGELD---EELDAHL 83
>gi|115465821|ref|NP_001056510.1| Os05g0594900 [Oryza sativa Japonica Group]
gi|55733874|gb|AAV59381.1| unknown protein [Oryza sativa Japonica Group]
gi|113580061|dbj|BAF18424.1| Os05g0594900 [Oryza sativa Japonica Group]
Length = 99
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 8/88 (9%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGD 59
M+ AGP L S +D+ + V+ DGR ++GTL FDQ N +L+ + ERV +
Sbjct: 1 MASAGP-------GLESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTRE 53
Query: 60 LYCDIPLGLYVIRGENVVLIGELDLERD 87
+ LGLY+IRG+N+ ++GE+D E D
Sbjct: 54 GVQQLVLGLYIIRGDNISVVGEVDEELD 81
>gi|255936991|ref|XP_002559522.1| Pc13g11030 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584142|emb|CAP92172.1| Pc13g11030 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 98
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV----GDLYCDIPLGLY 69
SL Y++KK+L+L DGR L+G L S DQ N VL ER+I + +I GLY
Sbjct: 2 SLHFYVNKKVLILTVDGRTLIGDLLSTDQTTNLVLANTVERIIRTPEDDEPSTEIEHGLY 61
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+NVV+ GE+D + D
Sbjct: 62 LIRGDNVVVCGEIDEKMD 79
>gi|428182006|gb|EKX50868.1| hypothetical protein GUITHDRAFT_157257 [Guillardia theta
CCMP2712]
Length = 96
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++ L+S +D + ++ DGR ++GTL DQ N +LE ERV + + + LGLY
Sbjct: 1 MAKKLSSLIDSPVSIITNDGRNIIGTLKGLDQKLNVILEECYERVFSKEAGVEQVTLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
++RG+N+ ++GE+D +D
Sbjct: 61 IVRGDNIAIVGEVDEHKD 78
>gi|296005102|ref|XP_002808886.1| u6 snRNA-associated Sm-like protein, putative [Plasmodium
falciparum 3D7]
gi|225632285|emb|CAX64164.1| u6 snRNA-associated Sm-like protein, putative [Plasmodium
falciparum 3D7]
Length = 95
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S ++ SYL+ ++LV+ D R G L FDQ N +L G C I + I LG+Y+I
Sbjct: 3 SINIESYLENEILVITNDSRIFTGKLKGFDQTTNIIL-GNCHERIYKESMEKISLGVYII 61
Query: 72 RGENVVLIGELDLERDE 88
RG+ V LIGE+D + D+
Sbjct: 62 RGDTVTLIGEIDEDVDK 78
>gi|412991296|emb|CCO16141.1| U6 snRNA-associated Sm-like protein LSm8 [Bathycoccus prasinos]
Length = 96
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-PLGLY 69
+S+ L +L+ + ++ DGR ++G L FDQ N ++E ERV + ++ PLGLY
Sbjct: 1 MSSMLKPFLNSVISIITNDGRHIVGHLRGFDQQTNLIVENCHERVYSMENGVEMAPLGLY 60
Query: 70 VIRGENVVLIGELDLERDE 88
V+RG+NV L+G++D E D+
Sbjct: 61 VVRGDNVALVGDVDEELDQ 79
>gi|294659468|ref|XP_461847.2| DEHA2G06886p [Debaryomyces hansenii CBS767]
gi|199433986|emb|CAG90308.2| DEHA2G06886p [Debaryomyces hansenii CBS767]
Length = 99
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD---IPLGLY 69
+SL +L+KK+ V+ D R GTL FD N ++ ER+I D D IPLGLY
Sbjct: 2 SSLKEFLEKKVRVITTDARLFEGTLQGFDNSTNVIINNCIERLIYPDEQDDNQEIPLGLY 61
Query: 70 VIRGENVVLIGELD 83
++RG N+V IGE+D
Sbjct: 62 LMRGGNIVCIGEVD 75
>gi|156097675|ref|XP_001614870.1| U6 snRNA-associated Sm-like protein LSm8 [Plasmodium vivax Sal-1]
gi|148803744|gb|EDL45143.1| U6 snRNA-associated Sm-like protein LSm8, putative [Plasmodium
vivax]
Length = 95
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S ++ SYL+ ++LV+ D R G L FDQ N +L G C I + I LGLY+I
Sbjct: 3 SINIESYLENEILVITNDSRIFTGKLKGFDQTTNIIL-GNCYERIYKESLEKISLGLYII 61
Query: 72 RGENVVLIGELDLERDE 88
RG+ V LIGE+D + D+
Sbjct: 62 RGDTVTLIGEIDEDVDK 78
>gi|389582364|dbj|GAB65102.1| U6 snRNA-associated Sm-like protein LSm8 [Plasmodium cynomolgi
strain B]
Length = 95
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S ++ SYL+ ++LV+ D R G L FDQ N +L G C I + I LGLY+I
Sbjct: 3 SINIESYLENEILVITNDSRIFTGKLKGFDQTTNIIL-GNCYERIYKESLEKISLGLYII 61
Query: 72 RGENVVLIGELDLERDE 88
RG+ V LIGE+D + D+
Sbjct: 62 RGDTVTLIGEIDEDVDK 78
>gi|221053308|ref|XP_002258028.1| u6 snrna-associated sm-like protein [Plasmodium knowlesi strain
H]
gi|193807861|emb|CAQ38565.1| u6 snrna-associated sm-like protein, putative [Plasmodium
knowlesi strain H]
Length = 95
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S ++ SYL+ ++LV+ D R G L FDQ N +L G C I + I LGLY+I
Sbjct: 3 SINIESYLENEILVITNDSRIFTGKLKGFDQTTNIIL-GNCYERIYKESLEKISLGLYII 61
Query: 72 RGENVVLIGELDLERDE 88
RG+ V LIGE+D + D+
Sbjct: 62 RGDTVTLIGEIDEDVDK 78
>gi|255075791|ref|XP_002501570.1| predicted protein [Micromonas sp. RCC299]
gi|226516834|gb|ACO62828.1| predicted protein [Micromonas sp. RCC299]
Length = 96
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP-LGLY 69
++ L +D ++ V+ DGR ++G L FDQ N +LE ERV D + LGLY
Sbjct: 1 MAKELTPLVDTQISVITNDGRNIIGILRGFDQTTNLILEECFERVYSEDSGVEQAVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+N+ +IGELD E D
Sbjct: 61 IIRGDNIAIIGELDEELD 78
>gi|121543869|gb|ABM55599.1| U6 snRNA-associated Sm-like protein [Maconellicoccus hirsutus]
Length = 95
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIR 72
+L SY++ + ++ DGR +GTL FDQ N +L+ + ERV + + + LGL++IR
Sbjct: 3 ALESYVNHIVTIITADGRHFVGTLKGFDQTLNVILDDSHERVYSTNQGVEQVVLGLHIIR 62
Query: 73 GENVVLIGELD 83
G+NVV++GE+D
Sbjct: 63 GDNVVIVGEID 73
>gi|396081451|gb|AFN83068.1| U6 snRNA-associated small Sm-like protein [Encephalitozoon
romaleae SJ-2008]
Length = 107
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 7 DDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPL 66
+D + YL+++++V+LRDGR L G + SFDQF + L+ ER+ + Y +
Sbjct: 4 EDFGNTRDYEKYLEQEIVVVLRDGRYLYGIMKSFDQFNSITLDRVIERIFHDEKYAERKH 63
Query: 67 GLYVIRGENVVLIG 80
L++IRGEN+ +IG
Sbjct: 64 ELFIIRGENITMIG 77
>gi|242016169|ref|XP_002428708.1| lsm1, putative [Pediculus humanus corporis]
gi|212513379|gb|EEB15970.1| lsm1, putative [Pediculus humanus corporis]
Length = 96
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
+++ L SY++ + ++ DGR +GTL FDQ N +L+ + ERV + + LGL+
Sbjct: 1 MASGLESYVNHTVSIITSDGRNFVGTLRGFDQTINLILDESHERVYSQTQGIEQVVLGLH 60
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+NV +IGE+D E D
Sbjct: 61 IIRGDNVAVIGEMDDEID 78
>gi|171687845|ref|XP_001908863.1| hypothetical protein [Podospora anserina S mat+]
gi|170943884|emb|CAP69536.1| unnamed protein product [Podospora anserina S mat+]
Length = 144
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 21 KKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV----GDLYCDIPLGLYVIRGENV 76
+K+ ++ DGR L+GTL ++D N VL+ ER+I + +PLGLY+IRGENV
Sbjct: 56 EKVCIITTDGRTLVGTLAAYDNTTNLVLQNTIERIIRTPDDAEPSAQVPLGLYLIRGENV 115
Query: 77 VLIGELDLERDE 88
IG +D D+
Sbjct: 116 CTIGLVDEALDD 127
>gi|358398681|gb|EHK48032.1| hypothetical protein TRIATDRAFT_305784 [Trichoderma atroviride
IMI 206040]
Length = 99
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGL 68
+L YL+KK+L++ D R L+G L + D N VL+ A ER+I D ++PLGL
Sbjct: 2 ATLGGYLNKKVLIVTADSRILVGELAACDASTNLVLKNALERIIRTPDDPDPSAEVPLGL 61
Query: 69 YVIRGENVVLIGELDLERDE 88
Y++RG+NV IG +D DE
Sbjct: 62 YLVRGDNVCSIGLVDETLDE 81
>gi|168040498|ref|XP_001772731.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675956|gb|EDQ62445.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 98
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
T L S +D+ + V+ DGR ++G L FDQ N +L+ + ERV + + LGL++I
Sbjct: 5 TGLESLIDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKAGVEQVVLGLHII 64
Query: 72 RGENVVLIGELDLERD 87
RG+N+ ++GELD E D
Sbjct: 65 RGDNIGVVGELDEELD 80
>gi|396460512|ref|XP_003834868.1| hypothetical protein LEMA_P070110.1 [Leptosphaeria maculans JN3]
gi|312211418|emb|CBX91503.1| hypothetical protein LEMA_P070110.1 [Leptosphaeria maculans JN3]
Length = 219
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 5/85 (5%)
Query: 8 DVYLST-SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI----VGDLYC 62
+ YL+ SL YL+K++ VL DGR ++GTL S D N VL+ A ER+I
Sbjct: 116 ETYLANMSLNVYLNKRVSVLTLDGRTMVGTLHSCDNSMNLVLQNAIERIIRPREEEVPSE 175
Query: 63 DIPLGLYVIRGENVVLIGELDLERD 87
++PLGLY++RG++V ++G LD E D
Sbjct: 176 EVPLGLYIVRGDSVAVVGRLDEEVD 200
>gi|351723875|ref|NP_001237294.1| uncharacterized protein LOC100305829 [Glycine max]
gi|356525792|ref|XP_003531507.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Glycine max]
gi|255626721|gb|ACU13705.1| unknown [Glycine max]
Length = 98
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 4 AGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYC 62
AGP L S +D+ + V+ DGR ++G L FDQ N +L+ + ERV +
Sbjct: 3 AGP-------GLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQ 55
Query: 63 DIPLGLYVIRGENVVLIGELDLERD 87
+ LGLY+IRG+N+ ++GELD E D
Sbjct: 56 QLVLGLYIIRGDNISVVGELDEELD 80
>gi|225454559|ref|XP_002263175.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Vitis vinifera]
gi|297737198|emb|CBI26399.3| unnamed protein product [Vitis vinifera]
Length = 98
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLYVIRG 73
L S +D+ + V+ DGR ++G L FDQ N +L+ + ERV + + LGLY+IRG
Sbjct: 7 LESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRG 66
Query: 74 ENVVLIGELDLERD 87
+N+ ++GELD E D
Sbjct: 67 DNISIVGELDEELD 80
>gi|313586493|gb|ADR71257.1| U6 snRNA-associated Sm-like protein LSm8 [Hevea brasiliensis]
Length = 98
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLYVIRG 73
L S +D+ + V+ DGR ++G L FDQ N +L+ + ERV + + LGLY+IRG
Sbjct: 7 LESLVDQTISVITNDGRNIVGILKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRG 66
Query: 74 ENVVLIGELDLERD 87
+N+ ++GELD E D
Sbjct: 67 DNISIVGELDEELD 80
>gi|388854537|emb|CCF51924.1| related to LSM8-Component of small nuclear ribonucleoprotein
complexes involved in RNA processing and splicing
[Ustilago hordei]
Length = 96
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
+++ Y ++ +LV+ +DGR ++G L D + +L + ER+ D + +PLGLY++
Sbjct: 2 SAIQQYHNQTVLVITQDGRVIVGLLKGSDSVGSIILANSVERIFSSDQGVEELPLGLYIL 61
Query: 72 RGENVVLIGELDLERDE 88
RG+ + L+G+LD+E+D+
Sbjct: 62 RGDGISLVGQLDVEKDK 78
>gi|403412047|emb|CCL98747.1| predicted protein [Fibroporia radiculosa]
Length = 439
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 23 LLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVIRGENVVLIGE 81
+L++L+DGR ++G + +DQ +N VL + ERV D +IPLGLY+++G+ +VLIGE
Sbjct: 356 VLLILQDGRSIIGVMAGYDQKSNVVLSDSKERVYSADEGVEEIPLGLYLVKGDQIVLIGE 415
Query: 82 LDLERDE 88
++ D+
Sbjct: 416 VNEALDQ 422
>gi|357622254|gb|EHJ73807.1| hypothetical protein KGM_20501 [Danaus plexippus]
Length = 96
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL-YCDIPLGLY 69
+++ L +Y+++ + V+ DGR +GTL FDQ N +L+ + ERV + LGL+
Sbjct: 1 MASGLENYINQTVSVITADGRNFIGTLKGFDQTINIILDESHERVFSSSTGVAQVVLGLH 60
Query: 70 VIRGENVVLIGELD 83
+IRG+N+ ++G++D
Sbjct: 61 IIRGDNIAIVGQID 74
>gi|358387144|gb|EHK24739.1| hypothetical protein TRIVIDRAFT_30919 [Trichoderma virens Gv29-8]
Length = 99
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLY 69
+L YL+KK+L++ D R L+G L + D N VL+GA ER+I + ++PLGLY
Sbjct: 3 TLGGYLNKKVLIVTADSRILVGELAACDASTNLVLKGAVERIIRTPDDPEPSAEVPLGLY 62
Query: 70 VIRGENVVLIGELDLERDE 88
++RG+NV +G +D D+
Sbjct: 63 LVRGDNVCSVGLVDETLDD 81
>gi|169806226|ref|XP_001827858.1| U6 snRNA-associated Sm-like protein LSm8 [Enterocytozoon bieneusi
H348]
gi|161779306|gb|EDQ31329.1| U6 snRNA-associated Sm-like protein LSm8 [Enterocytozoon bieneusi
H348]
Length = 136
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 16 ASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGEN 75
+SY+DK ++V+L+D L GTL S+DQ+ N L A +R+ + Y + +G VIRG+
Sbjct: 41 SSYVDKNVVVILKDNSLLYGTLKSYDQYNNISLNYAVQRIFHNNQYAEKMIGFIVIRGDT 100
Query: 76 VVLIG 80
+V+I
Sbjct: 101 IVMIS 105
>gi|449439529|ref|XP_004137538.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cucumis sativus]
gi|449514856|ref|XP_004164499.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cucumis sativus]
Length = 98
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLYVIRG 73
L S +D+ + V+ DGR ++G L FDQ N +L+ + ERV + + LGLY+IRG
Sbjct: 7 LDSLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRG 66
Query: 74 ENVVLIGELDLERD 87
+N+ ++GELD E D
Sbjct: 67 DNISIVGELDEELD 80
>gi|240278846|gb|EER42352.1| small nuclear ribonucleoprotein Lsm8 [Ajellomyces capsulatus
H143]
gi|325090103|gb|EGC43413.1| small nuclear ribonucleoprotein Lsm8 [Ajellomyces capsulatus H88]
Length = 94
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 21 KKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLYVIRGENV 76
KK+L+L DGR L+GTL S DQ N VL ER+I + + GLY+IRG+NV
Sbjct: 5 KKVLILTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTSDDPEPSSQVEHGLYLIRGDNV 64
Query: 77 VLIGELDLERD 87
V+ GE+D E D
Sbjct: 65 VICGEVDEEID 75
>gi|167519032|ref|XP_001743856.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777818|gb|EDQ91434.1| predicted protein [Monosiga brevicollis MX1]
Length = 92
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-PLGLYVIRG 73
+ Y++K + + +DGR L G L FDQ N +L ERV +I P+GLY++RG
Sbjct: 1 MEGYMNKAVTIATQDGRLLTGILKGFDQSTNLILNQCYERVFSLHSGVEIVPMGLYIVRG 60
Query: 74 ENVVLIGELDLERD 87
+NV ++GE D E D
Sbjct: 61 DNVAVVGETDEETD 74
>gi|15218779|ref|NP_176747.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
gi|79320777|ref|NP_001031238.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
gi|17979539|gb|AAL50104.1| At1g65700/F1E22_3 [Arabidopsis thaliana]
gi|20334918|gb|AAM16215.1| At1g65700/F1E22_3 [Arabidopsis thaliana]
gi|21592627|gb|AAM64576.1| small nuclear ribonucleoprotein, putative [Arabidopsis thaliana]
gi|332196292|gb|AEE34413.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
gi|332196293|gb|AEE34414.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
Length = 98
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLYV 70
+T L + +D+ + V+ DGR ++G L FDQ N +L+ + ERV + LGLY+
Sbjct: 4 TTGLETLVDQIISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQHVLGLYI 63
Query: 71 IRGENVVLIGELDLERD 87
IRG+N+ +IGELD E D
Sbjct: 64 IRGDNIGVIGELDEELD 80
>gi|154288024|ref|XP_001544807.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408448|gb|EDN03989.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 94
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 21 KKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLYVIRGENV 76
KK+L+L DGR L+GTL S DQ N VL ER+I + + GLY+IRG+NV
Sbjct: 5 KKVLILTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSSQVEHGLYLIRGDNV 64
Query: 77 VLIGELDLERD 87
V+ GE+D E D
Sbjct: 65 VICGEVDEEID 75
>gi|303277307|ref|XP_003057947.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460604|gb|EEH57898.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 96
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++ L +D + V+ DGR ++G L FDQ N +L+ ERV + PLGLY
Sbjct: 1 MAKELTELVDTLISVITSDGRNIVGVLRGFDQTTNLILDECFERVYSASSGVEEAPLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+N+ +IGE+D E D
Sbjct: 61 IIRGDNIAVIGEIDDEMD 78
>gi|346978215|gb|EGY21667.1| hypothetical protein VDAG_03107 [Verticillium dahliae VdLs.17]
Length = 99
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI----VGDLYCDIPLGLYV 70
L SY++KK+L++ D R L+G L + D N L A ERVI + ++PLGLY+
Sbjct: 4 LHSYMNKKVLIITADSRILVGNLVASDNNTNLALSDAHERVIQTPDADEPSVEVPLGLYM 63
Query: 71 IRGENVVLIGELDLERD 87
+RG+NV IG +D + D
Sbjct: 64 VRGDNVCTIGLVDEQLD 80
>gi|255565755|ref|XP_002523867.1| lsm1, putative [Ricinus communis]
gi|223536955|gb|EEF38593.1| lsm1, putative [Ricinus communis]
Length = 98
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP-LGLYVIRG 73
L S +D+ + V+ DGR ++G L FDQ N +L+ + ERV + LGLY+IRG
Sbjct: 7 LESLVDQNISVITNDGRNIVGILKGFDQATNIILDESHERVYSTKEGVQLHVLGLYIIRG 66
Query: 74 ENVVLIGELDLERD 87
+N+ ++GELD E D
Sbjct: 67 DNISIVGELDEELD 80
>gi|261195584|ref|XP_002624196.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239588068|gb|EEQ70711.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239610441|gb|EEQ87428.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis ER-3]
Length = 216
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 42 QFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLER-DELPPHLTHVSVAE 100
+ AN VL+G ER+ G+L+ DI G+Y+IRGENV+L+GE+DL++ D++P E
Sbjct: 119 EIANLVLQGTVERLYAGNLFADIQRGIYLIRGENVLLLGEVDLDKEDDIPTGYRQAPFEE 178
Query: 101 I 101
+
Sbjct: 179 V 179
>gi|396464109|ref|XP_003836665.1| hypothetical protein LEMA_P042010.1 [Leptosphaeria maculans JN3]
gi|312213218|emb|CBX93300.1| hypothetical protein LEMA_P042010.1 [Leptosphaeria maculans JN3]
Length = 230
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 16/117 (13%)
Query: 6 PDDVYLSTS-LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD----- 59
P +L+++ L +DKK+ +LLRD ++ +G L S+DQFAN VL ER+ +
Sbjct: 84 PPQAFLTSAMLLDMVDKKVDILLRDEKEYIGILRSYDQFANLVLTECYERIAARNPDATP 143
Query: 60 ---------LYCDIPL-GLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVSA 106
L D+ L G+ IRGENV + +DL+R+E P T V +++ ++A
Sbjct: 144 SSDPSIPRWLIHDVKLPGIMTIRGENVTICATVDLDREESPRGATFADVDQVRTLAA 200
>gi|50546088|ref|XP_500571.1| YALI0B06534p [Yarrowia lipolytica]
gi|49646437|emb|CAG82802.1| YALI0B06534p [Yarrowia lipolytica CLIB122]
Length = 97
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
++L+ Y++K + V+ DGR ++G L +DQ N +L ERVI D + + LGLY++
Sbjct: 2 SALSGYINKPVTVITTDGRLILGILQGYDQATNVILSNTRERVITPDEPTEVVDLGLYML 61
Query: 72 RGENVVLIGELDLERD 87
RG+ + +GE DLE D
Sbjct: 62 RGDCIACVGETDLELD 77
>gi|226529351|ref|NP_001150391.1| LOC100284021 [Zea mays]
gi|194699348|gb|ACF83758.1| unknown [Zea mays]
gi|195638896|gb|ACG38916.1| LSM Sm-like protein family member [Zea mays]
gi|195642734|gb|ACG40835.1| LSM Sm-like protein family member [Zea mays]
gi|413946381|gb|AFW79030.1| LSM Sm-like protein family member [Zea mays]
Length = 99
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV-GD 59
M+ GP +L +D+ + V+ DGR ++GTL FDQ N +L+ + ERV +
Sbjct: 1 MASGGP-------ALEPLVDQVISVITNDGRNIVGTLRGFDQATNIILDESHERVYSRKE 53
Query: 60 LYCDIPLGLYVIRGENVVLIGELDLERD 87
+ LGLY+IRG+N+ ++GE+D E D
Sbjct: 54 GVQQLVLGLYIIRGDNISVVGEVDEELD 81
>gi|385305643|gb|EIF49604.1| lsm1p [Dekkera bruxellensis AWRI1499]
Length = 146
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 19 LDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD--LYCDIPLG-LYVIRGEN 75
+D+K++V L DGR L+G L +FDQF N V+ ER+ + D Y + Y+IRGEN
Sbjct: 25 VDRKVIVNLWDGRTLVGVLRTFDQFGNLVIHDGVERIYLLDKKQYAESEKPRTYLIRGEN 84
Query: 76 VVLIGELDLE-RDELPPHLTHVSVAEIKRV 104
VV++ ELD++ DE LT + K+
Sbjct: 85 VVMMVELDIDMEDESLSELTRIDYDSAKKT 114
>gi|170060880|ref|XP_001865997.1| LSM8 protein [Culex quinquefasciatus]
gi|167879234|gb|EDS42617.1| LSM8 protein [Culex quinquefasciatus]
Length = 95
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
+ L SY++ + ++ DGR +GTL FDQ N +L+ + ERV + + LGL++I
Sbjct: 2 SGLESYVNNTVSIITADGRNFVGTLKGFDQTVNIILDESHERVYSMTAGIEQVVLGLHII 61
Query: 72 RGENVVLIGELDLERD 87
RG+NV +IG+LD D
Sbjct: 62 RGDNVAIIGQLDESVD 77
>gi|31240533|ref|XP_320680.1| AGAP011837-PA [Anopheles gambiae str. PEST]
gi|21288006|gb|EAA00327.1| AGAP011837-PA [Anopheles gambiae str. PEST]
Length = 95
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
+ L SY++ + ++ DGR +GTL FDQ N +L+ + ERV + + LGL++I
Sbjct: 2 SGLESYVNNTVSIITADGRNFVGTLKGFDQTVNVILDESHERVYSMTAGIEQVVLGLHII 61
Query: 72 RGENVVLIGELDLERD 87
RG+N+ +IG+LD D
Sbjct: 62 RGDNIAIIGQLDESVD 77
>gi|157104024|ref|XP_001648223.1| small nuclear ribonucleoprotein, core, putative [Aedes aegypti]
gi|108880439|gb|EAT44664.1| AAEL003985-PA [Aedes aegypti]
Length = 162
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
+ L SY++ + ++ DGR +GTL FDQ N +L+ + ERV + + + LGL++I
Sbjct: 69 SGLESYVNTTVSIITADGRNFVGTLKGFDQTINIILDESHERVYSMNAGIEQVVLGLHII 128
Query: 72 RGENVVLIGELD 83
RG+NV +IG+LD
Sbjct: 129 RGDNVAVIGQLD 140
>gi|399216101|emb|CCF72789.1| unnamed protein product [Babesia microti strain RI]
Length = 99
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP-----LG 67
+ L ++ +LV+ DGR +G+L FDQ N +L + ERV C+ P LG
Sbjct: 3 SGLEDLVNCTVLVVTYDGRVFVGSLEGFDQLTNLILNQSEERV----YRCNSPVERLKLG 58
Query: 68 LYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVS 105
L+VIRG+NVVLIGE+D E D + +S + I V
Sbjct: 59 LFVIRGDNVVLIGEVDNELD-FSTNFDQISASAIGPVG 95
>gi|402222121|gb|EJU02188.1| Sm-like ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 98
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVI 71
SL Y+++++L++L+DGR ++GTL FD ++ VL ER D ++ LGLY++
Sbjct: 2 ASLNGYINQRVLLILQDGRCIVGTLAGFDNRSDIVLSNCIERTYSPDEPVEEVSLGLYLV 61
Query: 72 RGENVVLIGELDLE 85
+G+ ++L+GELD E
Sbjct: 62 KGDMILLVGELDTE 75
>gi|46107166|ref|XP_380642.1| hypothetical protein FG00466.1 [Gibberella zeae PH-1]
Length = 132
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 8 DVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV----GDLYCD 63
++Y LA+ +K+L++ D R L+GT+ + DQ N VL A ER+I +
Sbjct: 16 ELYRPRQLANIHQEKVLIVTADSRILVGTMAACDQTTNLVLNNAVERIIRTPDDSEPSAQ 75
Query: 64 IPLGLYVIRGENVVLIGELDLERDE 88
+PLGLY++RG+NV IG +D D+
Sbjct: 76 VPLGLYLVRGDNVCSIGLVDEALDD 100
>gi|403223040|dbj|BAM41171.1| U6 snRNA-associated sm-like protein [Theileria orientalis strain
Shintoku]
Length = 94
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++ L Y++ + V+ DGR +G L FDQ N VL ERV + + + LG+Y
Sbjct: 1 MAPILEQYIESNVFVISVDGRVFVGVLKGFDQLTNLVLYNCLERVYHPEAPVEELELGVY 60
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NVVL+GE+DL+ D
Sbjct: 61 ILRGDNVVLVGEVDLDID 78
>gi|170041123|ref|XP_001848324.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864689|gb|EDS28072.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 123
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
+ L SY++ + ++ DGR +GTL FDQ N +L+ + ERV + + LGL++I
Sbjct: 2 SGLESYVNNTVSIITADGRNFVGTLKGFDQTVNIILDESHERVYSMTAGIEQVVLGLHII 61
Query: 72 RGENVVLIGELD 83
RG+NV +IG+LD
Sbjct: 62 RGDNVAIIGQLD 73
>gi|452003159|gb|EMD95616.1| hypothetical protein COCHEDRAFT_1209910 [Cochliobolus
heterostrophus C5]
Length = 98
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI--VGDLYC--DIPLGLY 69
+L +YL+K++ VL DGR ++G L S D N VL+ A ER+I V + ++PLGLY
Sbjct: 2 ALNAYLNKRVSVLTVDGRTMVGLLHSCDGSMNLVLQEATERIIRPVEEEIPSEEVPLGLY 61
Query: 70 VIRGENVVLIGELDLERD 87
+IRG++V ++G +D E D
Sbjct: 62 IIRGDSVAVVGRVDEEID 79
>gi|425767233|gb|EKV05807.1| U6 snrna-associated sm-like protein, putative [Penicillium
digitatum PHI26]
gi|425780084|gb|EKV18104.1| U6 snrna-associated sm-like protein, putative [Penicillium
digitatum Pd1]
Length = 108
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 10 YLSTSLASYLDK--KLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV----GDLYCD 63
Y++ + + LD+ K+L+L DGR L+G L S DQ N VL ER+I + +
Sbjct: 6 YVNNQVLTNLDQTEKVLILTVDGRTLIGDLLSTDQTTNLVLANTVERIIRTPDDDEPSTE 65
Query: 64 IPLGLYVIRGENVVLIGELDLERD 87
I GLY+IRG+NVV+ GE+D + D
Sbjct: 66 IEHGLYLIRGDNVVICGEIDEKLD 89
>gi|328865684|gb|EGG14070.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 145
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL-YCDIPLGLYVIRG 73
L + K++LVL DGR ++GTL DQ N +LE ER+ D LG+++I+G
Sbjct: 4 LEQFFKKQVLVLTADGRNIVGTLIGLDQTTNIILEKCHERIYSPDEGVTKYNLGIHLIKG 63
Query: 74 ENVVLIGELDLERDELPPHLTHVSVAEIKRVSA 106
++V +IGE+D E D + + + +I++ +A
Sbjct: 64 DDVAVIGEIDQELDAIVVVVMTIDKFDIEKKAA 96
>gi|196004032|ref|XP_002111883.1| hypothetical protein TRIADDRAFT_23559 [Trichoplax adhaerens]
gi|190585782|gb|EDV25850.1| hypothetical protein TRIADDRAFT_23559, partial [Trichoplax
adhaerens]
Length = 84
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 7/79 (8%)
Query: 25 VLLRDGRKLMGTLCSFDQFANAVLEGACERVIV-GDLYCDIPLGLYVIRGENVVLIGELD 83
V+ +DGR ++GTL FDQ N +L + ERV G + LGLYVIRG+N+ +IGE+D
Sbjct: 3 VITQDGRVIVGTLKGFDQTVNLILNDSHERVYSSGAGVEQVALGLYVIRGDNIAVIGEID 62
Query: 84 LERDELPPHLTHVSVAEIK 102
+ D + + +AE+K
Sbjct: 63 EDVD------SSIDLAEVK 75
>gi|453089691|gb|EMF17731.1| splicing factor [Mycosphaerella populorum SO2202]
Length = 98
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLY 69
SL SYL+KK+ ++L DGR ++G L S DQ N LEG ER+I + + GL+
Sbjct: 2 SLNSYLNKKVCLILVDGRCMVGKLISCDQVTNLALEGCVERIIRSPDDDEASEEEARGLF 61
Query: 70 VIRGENVVLIGELDLERDELPPHLTHVSVAEI 101
++RG+NVV+ G +D E D T V AEI
Sbjct: 62 MVRGDNVVVCGLVDEELD-ASIDWTKVRGAEI 92
>gi|451856356|gb|EMD69647.1| hypothetical protein COCSADRAFT_166623 [Cochliobolus sativus
ND90Pr]
Length = 98
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI--VGDLYC--DIPLGLY 69
+L +YL+K++ VL DGR ++G L S D N VL+ A ER+I V + ++PLGLY
Sbjct: 2 ALNAYLNKRVSVLTVDGRTMVGLLHSCDGSMNLVLQEATERIIRPVEEEIPSEEVPLGLY 61
Query: 70 VIRGENVVLIGELDLERD 87
+IRG++V ++G +D E D
Sbjct: 62 IIRGDSVAVVGRVDEEID 79
>gi|408398656|gb|EKJ77785.1| hypothetical protein FPSE_02019 [Fusarium pseudograminearum CS3096]
Length = 118
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 8 DVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV----GDLYCD 63
++Y LA+ +K+L++ D R L+GT+ + DQ N VL A ER+I +
Sbjct: 16 ELYRPHQLANTHQEKVLIVTADSRILVGTMAACDQTTNLVLNNAVERIIRTPDDSEPSAQ 75
Query: 64 IPLGLYVIRGENVVLIGELDLERDE 88
+PLGLY++RG+NV IG +D D+
Sbjct: 76 VPLGLYLVRGDNVCSIGLVDEALDD 100
>gi|320170227|gb|EFW47126.1| hypothetical protein CAOG_05070 [Capsaspora owczarzaki ATCC
30864]
Length = 95
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-PLGLYVI 71
+ L L K+LV DGR +GTL FDQ N +LE ER I LGLY+I
Sbjct: 2 SGLEELLQSKVLVATTDGRIFVGTLRGFDQMCNIILEHTVEREFNAQRGVVIVALGLYII 61
Query: 72 RGENVVLIGELDLERDE 88
+GEN+ ++G +D E DE
Sbjct: 62 KGENIAVVGSVDPEIDE 78
>gi|451851002|gb|EMD64303.1| hypothetical protein COCSADRAFT_199693 [Cochliobolus sativus
ND90Pr]
Length = 241
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 19/121 (15%)
Query: 6 PDDVYLSTS-LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD----- 59
P +L+++ L +DKK+ VLLRD ++ +G L S+DQFAN VL ER+ +
Sbjct: 95 PPQAFLTSAMLLDMVDKKVDVLLRDEKEYIGILRSYDQFANLVLTECYERIAARNPDVTP 154
Query: 60 ---------LYCDIPL-GLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVSALFF 109
L D+ L G+ +RGENV + +DL+R+E H AE +V AL
Sbjct: 155 SSDPSVPRWLINDVKLPGVMTVRGENVTICATVDLDREE---HPRGAKFAEEDQVRALAA 211
Query: 110 S 110
S
Sbjct: 212 S 212
>gi|340521980|gb|EGR52213.1| predicted protein [Trichoderma reesei QM6a]
Length = 99
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV----GDLYCDIPLGLY 69
+L YL+K +L++ D R L+G L + D N VL+GA ER+I + ++PLGLY
Sbjct: 3 TLGGYLNKTVLIVTADSRILVGELAACDASTNLVLKGAVERIIRTPDDPEPSAEVPLGLY 62
Query: 70 VIRGENVVLIGELDLERDE 88
++RG+NV +G +D D+
Sbjct: 63 LVRGDNVCSVGLVDEPLDK 81
>gi|407918877|gb|EKG12139.1| hypothetical protein MPH_10770 [Macrophomina phaseolina MS6]
Length = 98
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV----GDLYCDIPLGLY 69
SL +Y++KK+ ++ D R L+GTL S DQ N VL ER+I + ++ GLY
Sbjct: 2 SLQNYINKKICIITVDSRTLIGTLLSCDQMTNLVLSDTWERIIRPADDPEPSSEVQHGLY 61
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+NV L G +D E D
Sbjct: 62 LIRGDNVALCGLVDEELD 79
>gi|400602793|gb|EJP70391.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 99
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLY 69
SL SYL+KK+L++ D R L+G L + D N VL A ER+I + PLG+Y
Sbjct: 3 SLGSYLNKKVLIVTADSRILVGILTACDNSTNIVLSNAVERIIRTPDDPESSAIDPLGVY 62
Query: 70 VIRGENVVLIGELDLERDE 88
++RG+NV IG +D + D+
Sbjct: 63 IVRGDNVCSIGLVDEKLDD 81
>gi|451996339|gb|EMD88806.1| hypothetical protein COCHEDRAFT_1110556 [Cochliobolus
heterostrophus C5]
Length = 242
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 19/121 (15%)
Query: 6 PDDVYLSTS-LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD----- 59
P +L+++ L +DKK+ VLLRD ++ +G L S+DQFAN VL ER+ +
Sbjct: 96 PPQAFLTSAMLLDMVDKKVDVLLRDEKEYIGILRSYDQFANLVLTECYERIAARNPDATP 155
Query: 60 ---------LYCDIPL-GLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVSALFF 109
L D+ L G+ +RGENV + +DL+R+E H AE +V AL
Sbjct: 156 SSDPSVPRWLINDVKLPGVMTVRGENVTICATVDLDREE---HPRGAKFAEEDQVRALAA 212
Query: 110 S 110
S
Sbjct: 213 S 213
>gi|154282047|ref|XP_001541836.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412015|gb|EDN07403.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 251
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 16/89 (17%)
Query: 45 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLER-DELPPHLTHVSVAEI-- 101
N VL+G ER+ G+L+ DI G+Y++RGENV+L+GE+DL++ D++P E+
Sbjct: 157 NLVLQGTVERLYAGNLFADIQRGIYLVRGENVLLLGEVDLDKEDDIPTGYRQAPFEEVFA 216
Query: 102 -------------KRVSALFFSLLFLSLH 117
KR SA +L F + H
Sbjct: 217 LKKQEDNERKKRNKRSSAKLQTLGFEAEH 245
>gi|325093356|gb|EGC46666.1| small nuclear ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 262
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 16/89 (17%)
Query: 45 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLER-DELPPHLTHVSVAEI-- 101
N VL+G ER+ G+L+ DI G+Y++RGENV+L+GE+DL++ D++P E+
Sbjct: 168 NLVLQGTVERLYAGNLFADIQRGIYLVRGENVLLLGEVDLDKEDDIPTGYRQAPFEEVFA 227
Query: 102 -------------KRVSALFFSLLFLSLH 117
KR SA +L F + H
Sbjct: 228 LKKQEDNERKKRNKRSSAKLQTLGFEAEH 256
>gi|428671909|gb|EKX72824.1| U6 snRNA-associated Sm-like protein LSm8, putative [Babesia equi]
Length = 94
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLY 69
++ L +++ + V+ DGR +G L FDQ N VL ERV V ++ LG+Y
Sbjct: 1 MAPLLEQFIECHVFVISVDGRVFVGVLKGFDQLTNLVLYNCIERVYHVDSPVEELELGIY 60
Query: 70 VIRGENVVLIGELDLERD 87
V+RG+NVVL+GE+DL+ D
Sbjct: 61 VVRGDNVVLVGEVDLDVD 78
>gi|296812089|ref|XP_002846382.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238841638|gb|EEQ31300.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 179
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 45 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVA 99
N VL+ ER+ +LY DIP G+Y+IRGENV+L+GE+DL++D+ P ++ A
Sbjct: 85 NIVLQDTVERLYAENLYADIPRGVYLIRGENVLLLGEIDLDKDDDIPEPYQLAPA 139
>gi|388514443|gb|AFK45283.1| unknown [Lotus japonicus]
Length = 98
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLYVIR 72
L S +D+++ V+ DGR ++G L FDQ N +L+ + ERV + I LGLY+IR
Sbjct: 6 GLESLVDQQISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQIVLGLYIIR 65
Query: 73 GENVVLIGE 81
G+N+ ++GE
Sbjct: 66 GDNISVVGE 74
>gi|392575745|gb|EIW68877.1| hypothetical protein TREMEDRAFT_39244 [Tremella mesenterica DSM
1558]
Length = 94
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIR 72
+++ +Y+D + V+L DGR ++G L +D N +L ER + +PLGLY+I+
Sbjct: 2 SAVEAYVDHTVQVILYDGRVIVGKLRGYDPRTNLILSDCVEREYSLEGVEMVPLGLYMIK 61
Query: 73 GENVVLIGELDLERD 87
G+NV +IGE+D ++D
Sbjct: 62 GDNVAIIGEMDEDKD 76
>gi|342879398|gb|EGU80649.1| hypothetical protein FOXB_08872 [Fusarium oxysporum Fo5176]
Length = 119
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 6 PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI--VGDL--Y 61
P TSL +K+L++ D R L+GTL + DQ N VL A ER+I DL
Sbjct: 15 PSSTTYLTSLLIQTTEKVLIVTADSRILVGTLAACDQTTNLVLNNAVERIIRTPDDLEPS 74
Query: 62 CDIPLGLYVIRGENVVLIGELDLERDE 88
+PLGLY++RG+NV IG +D D+
Sbjct: 75 AQVPLGLYLVRGDNVCSIGLVDEALDD 101
>gi|319411566|emb|CBQ73610.1| related to LSM8-Component of small nuclear ribonucleoprotein
complexes involved in RNA processing and splicing
[Sporisorium reilianum SRZ2]
Length = 96
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVI 71
++L YLD+ +LV+ +DGR ++GTL D + +L + ER+ D ++PLGLY++
Sbjct: 2 SALQQYLDQHVLVITQDGRVIVGTLRGSDAVGSIILASSVERIFSADEGVEEVPLGLYIL 61
Query: 72 RGENVVLIG 80
RG+++ L+G
Sbjct: 62 RGDSICLVG 70
>gi|240275998|gb|EER39511.1| small nuclear ribonucleoprotein [Ajellomyces capsulatus H143]
Length = 297
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 16/89 (17%)
Query: 45 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLER-DELPPHLTHVSVAEI-- 101
N VL+G ER+ G+L+ DI G+Y++RGENV+L+GE+DL++ D++P E+
Sbjct: 203 NLVLQGTVERLYAGNLFADIQRGIYLVRGENVLLLGEVDLDKEDDIPTGYRQAPFEEVFA 262
Query: 102 -------------KRVSALFFSLLFLSLH 117
KR SA +L F + H
Sbjct: 263 LKKQEDNERKKRNKRSSAKLQTLGFEAEH 291
>gi|388510216|gb|AFK43174.1| unknown [Lotus japonicus]
Length = 98
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLYVIR 72
L S +D+++ V+ DGR ++G L FDQ N +L+ + ERV + I LGLY+IR
Sbjct: 6 GLESLVDQQISVITNDGRNIVGILKGFDQATNIILDESHERVFSTKEGVQQIVLGLYIIR 65
Query: 73 GENVVLIGE 81
G+N+ ++GE
Sbjct: 66 GDNISVVGE 74
>gi|354486322|ref|XP_003505330.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cricetulus griseus]
Length = 121
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 25 VLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRGENVVLIGELD 83
V+ DGR ++GTL FDQ N +L+ + ERV + + LGLY++RG+NV +IGE+D
Sbjct: 40 VITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 99
Query: 84 LERD 87
E D
Sbjct: 100 EETD 103
>gi|406603277|emb|CCH45205.1| Sm-like protein LSm1 [Wickerhamomyces ciferrii]
Length = 154
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ ++ Y+D+K+ V L DGR L G L +FDQ+ L + Y + +G+ +I
Sbjct: 37 AAAIIGYVDRKVCVTLTDGRHLFGVLRTFDQYGKIYLS--------DNRYGEEYVGVLLI 88
Query: 72 RGENVVLIGELDLERDELP-PHLTHVSVAEIKR 103
RGEN+V+IG++D+++++ P LT + + K+
Sbjct: 89 RGENIVIIGDVDIDKEDEPLSRLTRIPFPDAKQ 121
>gi|112253325|gb|ABI14250.1| Sm-like protein [Pfiesteria piscicida]
Length = 85
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
+S L + +D+++ V+ DGR +G L FDQ +N VL ERV + + + LGLY
Sbjct: 1 MSGILENLVDQQISVVTNDGRLFVGLLRGFDQTSNVVLSDCQERVFDTEKGVEQVVLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
VIRG+N+ ++GE+D E D
Sbjct: 61 VIRGDNIAVVGEVDEEID 78
>gi|169608576|ref|XP_001797707.1| hypothetical protein SNOG_07370 [Phaeosphaeria nodorum SN15]
gi|111063716|gb|EAT84836.1| hypothetical protein SNOG_07370 [Phaeosphaeria nodorum SN15]
Length = 234
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 16/117 (13%)
Query: 6 PDDVYLSTS-LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD----- 59
P +L+++ L +DKK+ VLLRD ++ +G L S+DQFAN VL ER+ +
Sbjct: 87 PPQAFLTSAMLLDMVDKKVDVLLRDEKEYIGILRSYDQFANLVLTECHERIAARNPDAEP 146
Query: 60 ---------LYCDIPL-GLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVSA 106
L D+ L G+ IRGENV + +DL+R++ P V E++ ++A
Sbjct: 147 SSAPSVPRWLIHDVKLPGVMTIRGENVTICATVDLDREDAPRGARFADVDEVRALAA 203
>gi|297841127|ref|XP_002888445.1| hypothetical protein ARALYDRAFT_315605 [Arabidopsis lyrata subsp.
lyrata]
gi|297334286|gb|EFH64704.1| hypothetical protein ARALYDRAFT_315605 [Arabidopsis lyrata subsp.
lyrata]
Length = 590
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 9 VYLSTS--LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIP 65
VY++T+ L +++ + V+ DGR ++G L FDQ N +L+ + ERV +
Sbjct: 491 VYMATNTGLEDLVNQIISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQHV 550
Query: 66 LGLYVIRGENVVLIGELDLERD 87
LGLY+IRG+N+ +IGELD E D
Sbjct: 551 LGLYIIRGDNIGVIGELDEELD 572
>gi|410988918|ref|XP_004000722.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Felis catus]
Length = 123
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++++L +Y+++ + ++ +GR ++GTL FDQ N +L+G E+V + + LGLY
Sbjct: 35 ITSALENYINRTVAIIPSNGRMIVGTLKGFDQTINLILDGNHEQVFSSSQGVELVVLGLY 94
Query: 70 VIRGENVVLIGELDLERD 87
+ +NV +IGE+D E D
Sbjct: 95 TVTSDNVAVIGEIDEETD 112
>gi|350296589|gb|EGZ77566.1| Sm-like ribonucleoprotein [Neurospora tetrasperma FGSC 2509]
Length = 100
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLYV 70
+ SYL+KK+ ++ DGR L+GTL S D N L+ A ERVI + +I LG ++
Sbjct: 6 VNSYLNKKVCIITVDGRTLVGTLISVDMSTNVFLQRAVERVIRSPDDDEPSAEIELGTHM 65
Query: 71 IRGENVVLIGELDLERDE 88
IRG+ V L+G +D DE
Sbjct: 66 IRGDTVCLVGLVDESLDE 83
>gi|397601457|gb|EJK57913.1| hypothetical protein THAOC_22004 [Thalassiosira oceanica]
Length = 527
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++TSL+ + +K + VL DGR + GTL +DQ N +L + ERV D + + LGL+
Sbjct: 1 MATSLSDWSEKTVTVLTCDGRLITGTLAGYDQLQNLILSRSSERVYSVDSPVEVVELGLF 60
Query: 70 VIRGENVVLIGE 81
V+RG+NV +IG+
Sbjct: 61 VVRGDNVAIIGD 72
>gi|330907058|ref|XP_003295695.1| hypothetical protein PTT_02318 [Pyrenophora teres f. teres 0-1]
gi|311332811|gb|EFQ96206.1| hypothetical protein PTT_02318 [Pyrenophora teres f. teres 0-1]
Length = 235
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 19/121 (15%)
Query: 6 PDDVYLSTS-LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD----- 59
P +L+++ L +DKK+ VLLRD ++ +G L S+DQFAN VL ER+ +
Sbjct: 89 PPQAFLTSAMLLDMVDKKVDVLLRDEKEYIGILRSYDQFANLVLTECYERIAARNPEAQP 148
Query: 60 ---------LYCDIPL-GLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRVSALFF 109
L D+ L G+ IRGENV + +DL+R+E P AE +V +L
Sbjct: 149 SSDPSIPRWLINDVKLPGVMTIRGENVTICATVDLDREEYP---KGAKFAEEDQVRSLAA 205
Query: 110 S 110
S
Sbjct: 206 S 206
>gi|238595225|ref|XP_002393704.1| hypothetical protein MPER_06519 [Moniliophthora perniciosa FA553]
gi|215461593|gb|EEB94634.1| hypothetical protein MPER_06519 [Moniliophthora perniciosa FA553]
Length = 112
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 18/94 (19%)
Query: 13 TSLASYLDKKLLVLLRDGRKLM-----------------GTLCSFDQFANAVLEGACERV 55
+SL Y+D+++ ++L+DGR ++ G + +DQ +N VL + ERV
Sbjct: 2 SSLQGYVDRRVFLVLQDGRSIVASIHYQSPGSSFDFSSQGVMAGYDQKSNVVLSDSKERV 61
Query: 56 IVGDLYCD-IPLGLYVIRGENVVLIGELDLERDE 88
D + IP+GLY+++G+ ++LIGE+D D+
Sbjct: 62 YSMDEGVEEIPVGLYLVKGDMIILIGEIDESVDQ 95
>gi|198428544|ref|XP_002121997.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm8
[Ciona intestinalis]
Length = 96
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++++L +++ + ++ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MASALEPLVNRIVSIVTADGRMIVGTLKGFDQTVNLILDESHERVFSSSHGVEQVMLGLY 60
Query: 70 VIRGENVVLIGELDLERD 87
+IRG+NV ++GE+D D
Sbjct: 61 IIRGDNVAVVGEVDDTTD 78
>gi|452848209|gb|EME50141.1| hypothetical protein DOTSEDRAFT_20523 [Dothistroma septosporum
NZE10]
Length = 98
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLY 69
SL SYL+KK+ ++L DGR ++G L S D N LE ER++ + + P GL+
Sbjct: 2 SLNSYLNKKVCLILVDGRCMVGNLISCDNVTNLALENCVERIVRSPDEDEASEEEPRGLF 61
Query: 70 VIRGENVVLIGELDLERDELPPHLTHVSVAEI 101
++RG+NVV+ G +D E D T V AEI
Sbjct: 62 MVRGDNVVVCGLVDEELDG-SIDWTKVKGAEI 92
>gi|295673983|ref|XP_002797537.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280187|gb|EEH35753.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 191
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 45 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLER-DELPPHLTHVSVAEI 101
N VL+G ER+ G L+ D+ G+Y++RGENV+L+GE+DL++ D++P S E+
Sbjct: 97 NLVLQGTVERIYAGHLFADVQRGIYLVRGENVLLLGEIDLDKEDDIPAGYRQASYDEV 154
>gi|358332137|dbj|GAA50846.1| U6 snRNA-associated Sm-like protein LSm8 [Clonorchis sinensis]
Length = 85
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 25 VLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRGENVVLIGELD 83
V+ DGR ++GTL FD N V++ + ERV + +PLGL++IRG+NV L+GE+D
Sbjct: 4 VITADGRTIVGTLKGFDNVINLVIKDSQERVFSPTEGVEQVPLGLFIIRGQNVALVGEID 63
Query: 84 LERD 87
+ D
Sbjct: 64 EDLD 67
>gi|225684614|gb|EEH22898.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 191
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 45 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLER-DELPPHLTHVSVAEI 101
N VL+G ER+ G L+ D+ G+Y++RGENV+L+GE+DL++ D++P S E+
Sbjct: 97 NLVLQGTVERIYAGHLFADVQRGIYLVRGENVLLLGEIDLDKEDDIPSGYRQASYDEV 154
>gi|238882680|gb|EEQ46318.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 146
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 2 SWAGPDDVYLS---TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG 58
++ P + ++S + L+S+L+KK+ V+ D R G L +D+ N +L ER+I
Sbjct: 32 NYHQPLNTHISVIMSELSSFLEKKVHVITSDARFFEGILEGYDKSTNIILSNCIERIIYS 91
Query: 59 D-----LYCDIPLGLYVIRGENVVLIGELDLE 85
+IPLG+Y++RG +V +GE+D E
Sbjct: 92 KDDEEGENQEIPLGVYIMRGNEIVCVGEIDDE 123
>gi|392341147|ref|XP_003754265.1| PREDICTED: LOW QUALITY PROTEIN: N-alpha-acetyltransferase 38, NatC
auxiliary subunit-like [Rattus norvegicus]
gi|392348918|ref|XP_003750235.1| PREDICTED: LOW QUALITY PROTEIN: N-alpha-acetyltransferase 38, NatC
auxiliary subunit-like [Rattus norvegicus]
Length = 132
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC--DIPLGL 68
++++L +Y+++ + V++ D R ++GTL FDQ N L+ + E ++ + LGL
Sbjct: 36 ITSALENYINRIVDVIISDVRTIVGTLKGFDQTINLTLDESHEWLVFSSSQGVEQVVLGL 95
Query: 69 YVIRGENVVLIGELDLERD 87
Y++RG+NV +IGE D E D
Sbjct: 96 YIVRGDNVAVIGERDEETD 114
>gi|330930214|ref|XP_003302943.1| hypothetical protein PTT_14940 [Pyrenophora teres f. teres 0-1]
gi|311321410|gb|EFQ88979.1| hypothetical protein PTT_14940 [Pyrenophora teres f. teres 0-1]
Length = 98
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI----VGDLYCDIPLGLY 69
+L +YL+KK+ VL DGR ++G L S D N VL+ A ER+I ++PLGLY
Sbjct: 2 ALNAYLNKKVSVLTLDGRTMVGKLHSCDGSMNLVLQEAVERIIRPLEEEVPSEEVPLGLY 61
Query: 70 VIRGENVVLIGELDLERD 87
+IRG++V ++G++D E D
Sbjct: 62 IIRGDSVAVVGKVDEEID 79
>gi|189205681|ref|XP_001939175.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975268|gb|EDU41894.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 98
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI----VGDLYCDIPLGLY 69
+L +YL+KK+ VL DGR ++G L S D N VL+ A ER+I ++PLGLY
Sbjct: 2 ALNAYLNKKVSVLTIDGRTMVGKLHSCDGSMNLVLQEAVERIIRPLEEEVPSEEVPLGLY 61
Query: 70 VIRGENVVLIGELDLERD 87
+IRG++V ++G++D E D
Sbjct: 62 IIRGDSVAVVGKVDEEID 79
>gi|91084979|ref|XP_972279.1| PREDICTED: similar to CG2021 CG2021-PA [Tribolium castaneum]
gi|270009009|gb|EFA05457.1| hypothetical protein TcasGA2_TC015638 [Tribolium castaneum]
Length = 96
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
+++ L S+++ + ++ DGR +GTL FDQ N +++ + ERV + + LGL+
Sbjct: 1 MASGLDSFVNHTVSIITSDGRNFIGTLKGFDQTINVIIDESHERVYSTTSGVEQVMLGLH 60
Query: 70 VIRGENVVLIGELDLERDE 88
+IRG+NV ++G +D E D
Sbjct: 61 IIRGDNVAIVGLIDDELDN 79
>gi|307174073|gb|EFN64760.1| U6 snRNA-associated Sm-like protein LSm8 [Camponotus floridanus]
Length = 85
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 25 VLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRGENVVLIGELD 83
++ DGR +GTL FDQ N +L+ + ERV + + LGL++IRG+NV ++GELD
Sbjct: 4 IITSDGRNFIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLHIIRGDNVAIVGELD 63
Query: 84 LERD 87
E D
Sbjct: 64 DEMD 67
>gi|312380997|gb|EFR26852.1| hypothetical protein AND_25852 [Anopheles darlingi]
Length = 95
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
+ L SY++ + ++ DGR +GT+ FDQ N +L+ + ERV + + LGL++I
Sbjct: 2 SGLESYVNHTVSIITADGRNFVGTMKGFDQTINIILDESHERVYSMSTGIEQVVLGLHII 61
Query: 72 RGENVVLIGELDLERD 87
RG+NV +IG LD D
Sbjct: 62 RGDNVAIIGLLDESVD 77
>gi|219114825|ref|XP_002178208.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409943|gb|EEC49873.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 86
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 21 KKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRGENVVLI 79
+ + V+ DGR ++G L +DQ N +L A ERV D + +PLGLYV+RG+NV L+
Sbjct: 1 ESVCVVTSDGRIIVGILTGYDQVQNLILNDAHERVYSVDADVEEVPLGLYVVRGDNVCLV 60
Query: 80 GELD 83
E+D
Sbjct: 61 AEVD 64
>gi|328773822|gb|EGF83859.1| hypothetical protein BATDEDRAFT_85570 [Batrachochytrium
dendrobatidis JAM81]
Length = 98
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 43 FANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLERD-ELPPHLTHVSVAE 100
FAN VL+ ER + Y D+ G++ IRGENVVL+GE+D E+D E LT + +E
Sbjct: 2 FANLVLQDTVERTFIDGTYSDVYRGVFAIRGENVVLLGEIDPEKDAEALAKLTKATASE 60
>gi|358372807|dbj|GAA89408.1| small nuclear ribonucleoprotein Lsm8 [Aspergillus kawachii IFO
4308]
Length = 105
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 11/81 (13%)
Query: 14 SLASYLD-------KKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYC 62
SL SY++ +K+ +L DGR L+GTL S DQ N VL ER+I +
Sbjct: 2 SLHSYINIIFPRSIEKVCILTVDGRTLLGTLLSTDQLTNLVLLDTIERIIRTPDDPEPSS 61
Query: 63 DIPLGLYVIRGENVVLIGELD 83
I GLY+IRG+NVVL GE+D
Sbjct: 62 QIEHGLYLIRGDNVVLCGEVD 82
>gi|363727561|ref|XP_003640398.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 1 [Gallus gallus]
Length = 80
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++++L +Y+++ + V+ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 60
Query: 70 VIRGENV 76
++RG+NV
Sbjct: 61 IVRGDNV 67
>gi|71027589|ref|XP_763438.1| U6 snRNA-associated Sm-like protein LSm8 [Theileria parva strain
Muguga]
gi|68350391|gb|EAN31155.1| U6 snRNA-associated Sm-like protein LSm8, putative [Theileria
parva]
Length = 94
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++ L +++ + V+ DGR +G L FDQ N VL ERV D + + LG+Y
Sbjct: 1 MAPILEQFIECSVFVISVDGRVFVGVLKGFDQLTNLVLYNCLERVYHPDAPVEELELGIY 60
Query: 70 VIRGENVVLIGELDLERD 87
++RG+N+VL+GE+D++ D
Sbjct: 61 LLRGDNIVLVGEVDVDVD 78
>gi|327272990|ref|XP_003221266.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Anolis carolinensis]
Length = 67
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++++L +Y+++ + V+ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 60
Query: 70 VIRGENV 76
++RG+NV
Sbjct: 61 IVRGDNV 67
>gi|353237612|emb|CCA69581.1| hypothetical protein PIIN_03520 [Piriformospora indica DSM 11827]
Length = 98
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL-YCDIPLGLYVI 71
+L + +DK++L++++DGR +MG L +DQ +N VL ER + D LG+Y++
Sbjct: 2 ATLHTLVDKRVLLVMQDGRVIMGNLVGWDQRSNIVLADCVERRFSQESGATDSALGVYMV 61
Query: 72 RGENVVLIGELDLERDE 88
+G+ + L+GE+D +E
Sbjct: 62 KGDQICLVGEVDAAIEE 78
>gi|66356716|ref|XP_625536.1| small nuclear ribonucleoprotein U6 [Cryptosporidium parvum Iowa II]
gi|46226537|gb|EAK87525.1| small nuclear ribonucleoprotein U6 [Cryptosporidium parvum Iowa II]
Length = 160
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 12 STSLASY-------LDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI 64
TSL+S+ LDK++ V+LRDGR+ G SFDQ+ + LE + E D Y +I
Sbjct: 36 QTSLSSWMLCLEEDLDKEIYVVLRDGRQFTGIFRSFDQYGSLCLERSFEVFSNNDCYNEI 95
Query: 65 PLGLYVIRGENVVLIGELD 83
G + RG+N++L G +D
Sbjct: 96 YQGCMIFRGDNLMLCGLID 114
>gi|119190767|ref|XP_001245990.1| hypothetical protein CIMG_05431 [Coccidioides immitis RS]
Length = 186
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 45 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLER-DELPPHLTHVSVAEI 101
N VL+ ERV G+LY + P G+Y++RGENV+L+GE+DL++ D++P E+
Sbjct: 92 NLVLQDTVERVYSGNLYGEEPRGVYLVRGENVLLLGEIDLDKEDDIPEPYRQAPYKEV 149
>gi|403355067|gb|EJY77101.1| hypothetical protein OXYTRI_01268 [Oxytricha trifallax]
Length = 319
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG--DLYCDIPLGL 68
++T + ++K + V+ DGR +GTL SFDQ N +L ER+ + D+ + +G+
Sbjct: 223 MATFVEQLVEKTVNVITNDGRNFIGTLVSFDQKTNLILSACIERIYIENHDVQAE-EMGV 281
Query: 69 YVIRGENVVLIGELD--LER 86
+ IRG+NV LI E+D LER
Sbjct: 282 FFIRGDNVCLIAEIDENLER 301
>gi|116783050|gb|ABK22776.1| unknown [Picea sitchensis]
gi|116791884|gb|ABK26147.1| unknown [Picea sitchensis]
gi|148908711|gb|ABR17463.1| unknown [Picea sitchensis]
Length = 98
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
+ L +D+ + V+ DGR ++G L +DQ N +++ + ERV + + LGLY+I
Sbjct: 5 SGLEDLVDETISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTRTGVEQLVLGLYII 64
Query: 72 RGENVVLIGELDLERD 87
RG+N+ ++GELD + D
Sbjct: 65 RGDNISVVGELDEDLD 80
>gi|6686407|gb|AAF23841.1|AC007234_13 F1E22.8 [Arabidopsis thaliana]
Length = 583
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGD 59
++W D+ LS+ + K + V+ DGR ++G L FDQ N +L+ + ERV +
Sbjct: 483 VTWRQLLDLRLSSIV-----KIISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKE 537
Query: 60 LYCDIPLGLYVIRGENVVLIGELDLERD 87
LGLY+IRG+N+ +IGELD E D
Sbjct: 538 GVQQHVLGLYIIRGDNIGVIGELDEELD 565
>gi|345561980|gb|EGX45052.1| hypothetical protein AOL_s00173g153 [Arthrobotrys oligospora ATCC
24927]
Length = 103
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPL------ 66
+ L +Y+DK + V+ DGR L+GTL DQ N +L+ ER I L D+
Sbjct: 2 SQLTAYIDKTVTVITSDGRTLIGTLLGHDQTTNLILQNTRER-IFQTLDTDVENTPSEIV 60
Query: 67 --GLYVIRGENVVLIGELDLERD 87
GLY+IRG+NV++ G +D + D
Sbjct: 61 EHGLYLIRGDNVLVCGLVDEKMD 83
>gi|440290917|gb|ELP84216.1| lsm1, putative [Entamoeba invadens IP1]
Length = 94
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
+ Y +K + + DGR +GTL +D +N VL ERV IP GL V+RG+
Sbjct: 4 IKQYQNKLVEAVTNDGRIFIGTLIGYDNPSNIVLRECIERVFSKSGVSVIPCGLLVLRGD 63
Query: 75 NVVLIGELDLERD 87
++LIG LD ++D
Sbjct: 64 EIILIGALDEQKD 76
>gi|380091971|emb|CCC10238.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 100
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLYV 70
+ SYL+K++ ++ DGR L+GTL S D N L+ A ERVI + +I LG ++
Sbjct: 6 VNSYLNKRVCIITVDGRTLVGTLISVDMSTNVFLQRAVERVIRSPDDDEPSAEIELGTHM 65
Query: 71 IRGENVVLIGELD 83
IRG+ V L+G +D
Sbjct: 66 IRGDTVCLVGLVD 78
>gi|452989425|gb|EME89180.1| hypothetical protein MYCFIDRAFT_25154 [Pseudocercospora fijiensis
CIRAD86]
Length = 98
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPL----GLY 69
SL SYL+KK+ ++L DGR ++G L S D N LE ER++ G + GL+
Sbjct: 2 SLNSYLNKKVCLILVDGRCMVGNLISCDAVTNLALENCVERIVRGHEEEEDSEEEERGLF 61
Query: 70 VIRGENVVLIGELDLERD 87
++RG+NVV+ G +D E D
Sbjct: 62 MVRGDNVVVCGLVDEELD 79
>gi|448117816|ref|XP_004203349.1| Piso0_000956 [Millerozyma farinosa CBS 7064]
gi|448120256|ref|XP_004203932.1| Piso0_000956 [Millerozyma farinosa CBS 7064]
gi|359384217|emb|CCE78921.1| Piso0_000956 [Millerozyma farinosa CBS 7064]
gi|359384800|emb|CCE78335.1| Piso0_000956 [Millerozyma farinosa CBS 7064]
Length = 101
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLY---CDIPLGLY 69
+S+++++DK++ V+ D R G L +D N +L+ ER+I + I LGLY
Sbjct: 4 SSISTFIDKRVRVITTDARLFEGILEGYDNSTNIILKSCIERIINTSDHEHNQTIELGLY 63
Query: 70 VIRGENVVLIGELD 83
++RG NVV IGE+D
Sbjct: 64 ILRGGNVVCIGEID 77
>gi|241955685|ref|XP_002420563.1| U6 snRNA-associated Sm-like protein, putative [Candida
dubliniensis CD36]
gi|223643905|emb|CAX41642.1| U6 snRNA-associated Sm-like protein, putative [Candida
dubliniensis CD36]
Length = 102
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV-----GDLYCDIPLG 67
+ L+S+L+K++ V+ D R G L +D+ N +L ER+I G+ +I LG
Sbjct: 2 SELSSFLEKRVHVITSDARFFEGKLEGYDKSTNIILSNCIERIIYSKDDEGEENEEISLG 61
Query: 68 LYVIRGENVVLIGELDLE 85
+Y++RG +V +GE+D E
Sbjct: 62 VYIMRGNEIVCVGEIDDE 79
>gi|66770917|gb|AAY54770.1| IP05048p [Drosophila melanogaster]
Length = 81
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L +DKKL+VLLRDGR L+G L S DQFAN VL+ ER+ VG + L+
Sbjct: 12 TAHLLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGRRHS--SRSLHHS 69
Query: 72 RGE 74
RGE
Sbjct: 70 RGE 72
>gi|195435808|ref|XP_002065871.1| GK20525 [Drosophila willistoni]
gi|194161956|gb|EDW76857.1| GK20525 [Drosophila willistoni]
Length = 95
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
+ L SY++ + ++ DGR +GTL FDQ N +++ ERV + I LGL++I
Sbjct: 2 SGLESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTAGTEQIVLGLHII 61
Query: 72 RGENVVLIGELD 83
RG+N+ +IG +D
Sbjct: 62 RGDNIAVIGLID 73
>gi|354543302|emb|CCE40020.1| hypothetical protein CPAR2_100580 [Candida parapsilosis]
Length = 101
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-----IPLG 67
+ LAS++ KK+ V+ D R G L FD+ N +L + ER+I D IP G
Sbjct: 2 SELASFVGKKVHVITTDARFFEGILEGFDKNTNIILSNSIERLIHSTQESDEANEAIPSG 61
Query: 68 LYVIRGENVVLIGELDLE 85
+ ++RG +V IGE+D E
Sbjct: 62 VNIMRGNEIVCIGEIDEE 79
>gi|387592500|gb|EIJ87524.1| hypothetical protein NEQG_02405 [Nematocida parisii ERTm3]
gi|387596986|gb|EIJ94606.1| hypothetical protein NEPG_00128 [Nematocida parisii ERTm1]
Length = 105
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L YLDK + V+LRD + G L S+DQ+ N +LE + VI + Y ++RGE
Sbjct: 14 LEEYLDKDIFVVLRDNTYIKGILRSYDQYYNILLEDITQYVISNNEYLLTESESVLLRGE 73
Query: 75 NVVLIGE 81
N++L+GE
Sbjct: 74 NIILLGE 80
>gi|402864615|ref|XP_003896552.1| PREDICTED: ankyrin repeat and KH domain-containing protein
mask-like [Papio anubis]
Length = 504
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++++L +Y+++ + V+ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 245 MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 304
Query: 70 VIRGENVV 77
++RG+NV
Sbjct: 305 IVRGDNVT 312
>gi|125976760|ref|XP_001352413.1| GA15189 [Drosophila pseudoobscura pseudoobscura]
gi|195170789|ref|XP_002026194.1| GL16212 [Drosophila persimilis]
gi|54641159|gb|EAL29909.1| GA15189 [Drosophila pseudoobscura pseudoobscura]
gi|194111074|gb|EDW33117.1| GL16212 [Drosophila persimilis]
Length = 95
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
+ L SY++ + ++ DGR +GTL FDQ N +++ ERV + I LGL++I
Sbjct: 2 SGLESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTSSGIEQIVLGLHII 61
Query: 72 RGENVVLIGELD 83
RG+N+ +IG +D
Sbjct: 62 RGDNIAVIGLID 73
>gi|116780179|gb|ABK21578.1| unknown [Picea sitchensis]
gi|116780948|gb|ABK21894.1| unknown [Picea sitchensis]
Length = 80
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DKKL + L R ++GTL FDQF N VL+G E + G+
Sbjct: 1 MSRSGQPPD------LKKYMDKKLNIKLNANRVVVGTLRGFDQFMNLVLDGTVE--VNGN 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
+I G+ VIRG +VV+I L+
Sbjct: 53 ERNEI--GMVVIRGNSVVMIEALE 74
>gi|255578959|ref|XP_002530332.1| small nuclear ribonucleoprotein G, putative [Ricinus communis]
gi|223530136|gb|EEF32048.1| small nuclear ribonucleoprotein G, putative [Ricinus communis]
Length = 80
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DKKL + L R ++GTL FDQF N V++ E + GD
Sbjct: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE--VNGD 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
DI G+ VIRG +VV + L+
Sbjct: 53 EKTDI--GMVVIRGNSVVTVEALE 74
>gi|24655606|ref|NP_647660.1| CG2021 [Drosophila melanogaster]
gi|194747038|ref|XP_001955961.1| GF24963 [Drosophila ananassae]
gi|194864976|ref|XP_001971199.1| GG14562 [Drosophila erecta]
gi|195336718|ref|XP_002034980.1| GM14170 [Drosophila sechellia]
gi|195490564|ref|XP_002093192.1| GE20916 [Drosophila yakuba]
gi|195587050|ref|XP_002083278.1| GD13439 [Drosophila simulans]
gi|7292155|gb|AAF47567.1| CG2021 [Drosophila melanogaster]
gi|68051537|gb|AAY85032.1| IP05684p [Drosophila melanogaster]
gi|190623243|gb|EDV38767.1| GF24963 [Drosophila ananassae]
gi|190652982|gb|EDV50225.1| GG14562 [Drosophila erecta]
gi|194128073|gb|EDW50116.1| GM14170 [Drosophila sechellia]
gi|194179293|gb|EDW92904.1| GE20916 [Drosophila yakuba]
gi|194195287|gb|EDX08863.1| GD13439 [Drosophila simulans]
gi|220951344|gb|ACL88215.1| CG2021-PA [synthetic construct]
Length = 95
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
+ L SY++ + ++ DGR +GTL FDQ N +++ ERV + I LGL++I
Sbjct: 2 SGLESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHII 61
Query: 72 RGENVVLIGELD 83
RG+N+ +IG +D
Sbjct: 62 RGDNIAVIGLID 73
>gi|393215720|gb|EJD01211.1| like-Sm ribonucleo protein [Fomitiporia mediterranea MF3/22]
Length = 77
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L ++DKKL V L+ GRK+ GTL FD F N VL+ A E P+G VIRG
Sbjct: 9 LKKFMDKKLFVHLQGGRKVSGTLRGFDIFLNLVLDDAIEETTPAQKS---PIGNVVIRGN 65
Query: 75 NVVLIGELDLER 86
+V L+ L+ R
Sbjct: 66 SVTLMETLEAAR 77
>gi|326517334|dbj|BAK00034.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 80
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DKKL + L R ++GTL FDQF N V++ E + GD
Sbjct: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVE--VNGD 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
DI G+ V+RG +VV+I L+
Sbjct: 53 EKTDI--GMVVLRGNSVVMIEALE 74
>gi|195125357|ref|XP_002007145.1| GI12774 [Drosophila mojavensis]
gi|193918754|gb|EDW17621.1| GI12774 [Drosophila mojavensis]
Length = 95
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
+ L SY++ + ++ DGR +GTL FDQ N +++ ERV + I LGL++I
Sbjct: 2 SGLESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHII 61
Query: 72 RGENVVLIGELD 83
RG+N+ +IG +D
Sbjct: 62 RGDNIAVIGLID 73
>gi|224088536|ref|XP_002308466.1| predicted protein [Populus trichocarpa]
gi|222854442|gb|EEE91989.1| predicted protein [Populus trichocarpa]
Length = 80
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 1 MSWAG--PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG 58
MS +G PD L Y+DKKL + L R ++GTL FDQF N V++ E + G
Sbjct: 1 MSRSGQPPD-------LKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE--VNG 51
Query: 59 DLYCDIPLGLYVIRGENVVLIGELD 83
D DI G+ VIRG +VV + L+
Sbjct: 52 DEKTDI--GMVVIRGNSVVTVEALE 74
>gi|328354479|emb|CCA40876.1| U6 snRNA-associated Sm-like protein LSm8 [Komagataella pastoris
CBS 7435]
Length = 98
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLYVIRG 73
L +L+K + V+ DG+ + G L FD N +LE A ERV + + I LGL+++RG
Sbjct: 4 LKPFLEKPVRVITSDGKLITGILQGFDVSTNIILEKAQERVFHLTEETQTIDLGLFLLRG 63
Query: 74 ENVVLIGELDLERDE 88
NVV IG +D E +E
Sbjct: 64 NNVVCIGLVDEEEEE 78
>gi|195011534|ref|XP_001983196.1| GH15765 [Drosophila grimshawi]
gi|193896678|gb|EDV95544.1| GH15765 [Drosophila grimshawi]
Length = 95
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
+ L SY++ + ++ DGR +GTL FDQ N +++ ERV + I LGL++I
Sbjct: 2 SGLESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTAGIEQIVLGLHII 61
Query: 72 RGENVVLIGELD 83
RG+N+ +IG +D
Sbjct: 62 RGDNIAVIGLVD 73
>gi|195403403|ref|XP_002060279.1| GJ16072 [Drosophila virilis]
gi|194140618|gb|EDW57092.1| GJ16072 [Drosophila virilis]
Length = 95
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
+ L SY++ + ++ DGR +GTL FDQ N +++ ERV + I LGL++I
Sbjct: 2 SGLESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHII 61
Query: 72 RGENVVLIGELD 83
RG+N+ +IG +D
Sbjct: 62 RGDNIAVIGLID 73
>gi|440797084|gb|ELR18179.1| small nuclear ribonucleoprotein G, putative [Acanthamoeba
castellanii str. Neff]
Length = 76
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 1 MSWA-GPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS A GPD L Y+DKKL + L R++ G L FDQF N VLE E V +
Sbjct: 1 MSKAVGPD-------LRRYMDKKLAIRLNANRRVSGILRGFDQFMNLVLEDTVEEVSSTE 53
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
LG+ VIRG +V+LI L+
Sbjct: 54 KN---ELGMVVIRGNSVILIEPLE 74
>gi|282848218|gb|ADB02890.1| putative small nuclear ribonucleoprotein polypeptide G/SNRNP-G
[Jatropha curcas]
Length = 80
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 1 MSWAG--PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG 58
MS +G PD L Y+DKKL + L R ++GTL FDQF N V++ E + G
Sbjct: 1 MSRSGQPPD-------LKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE--VNG 51
Query: 59 DLYCDIPLGLYVIRGENVVLIGELD 83
D DI G+ VIRG +VV + L+
Sbjct: 52 DEKNDI--GMVVIRGNSVVTVEALE 74
>gi|403256938|ref|XP_003921099.1| PREDICTED: ankyrin repeat domain-containing protein 7 [Saimiri
boliviensis boliviensis]
Length = 260
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++++L +Y+++ + V+ DGR ++GTL FDQ N +L+ + ERV + + LGLY
Sbjct: 1 MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY 60
Query: 70 VIRGENVV 77
++RG+NV
Sbjct: 61 IVRGDNVT 68
>gi|302790966|ref|XP_002977250.1| hypothetical protein SELMODRAFT_417143 [Selaginella
moellendorffii]
gi|300155226|gb|EFJ21859.1| hypothetical protein SELMODRAFT_417143 [Selaginella
moellendorffii]
Length = 103
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP-LGLYVI 71
T L +++ + V+ DGR ++G L +DQ N +++ + ERV + LGLY+I
Sbjct: 8 TGLEYLVNQLISVITNDGRNIVGMLKGYDQATNLIIDESHERVYSTTTGVEQHVLGLYII 67
Query: 72 RGENVVLIGELDLE 85
RG+N+ ++GELD E
Sbjct: 68 RGDNIAVVGELDDE 81
>gi|194694128|gb|ACF81148.1| unknown [Zea mays]
gi|195637264|gb|ACG38100.1| small nuclear ribonucleoprotein G [Zea mays]
gi|195645546|gb|ACG42241.1| small nuclear ribonucleoprotein G [Zea mays]
gi|413955444|gb|AFW88093.1| Small nuclear ribonucleoprotein G [Zea mays]
Length = 80
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DKKL + L R ++GTL FDQF N V++ E + G+
Sbjct: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVIDNTVE--VNGN 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
DI G+ VIRG +VV+I L+
Sbjct: 53 DKTDI--GMVVIRGNSVVMIEALE 74
>gi|34394185|dbj|BAC84637.1| putative small nuclear ribonucleoprotein E [Oryza sativa Japonica
Group]
gi|215769180|dbj|BAH01409.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218199999|gb|EEC82426.1| hypothetical protein OsI_26821 [Oryza sativa Indica Group]
gi|222637431|gb|EEE67563.1| hypothetical protein OsJ_25073 [Oryza sativa Japonica Group]
Length = 80
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DKKL + L R ++GTL FDQF N V++ E + G+
Sbjct: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVE--VNGN 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
DI G+ VIRG +VV+I L+
Sbjct: 53 EKNDI--GMVVIRGNSVVMIEALE 74
>gi|242050850|ref|XP_002463169.1| hypothetical protein SORBIDRAFT_02g039000 [Sorghum bicolor]
gi|241926546|gb|EER99690.1| hypothetical protein SORBIDRAFT_02g039000 [Sorghum bicolor]
Length = 80
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DKKL + L R ++GTL FDQF N V++ E + G+
Sbjct: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVIDNTVE--VNGN 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
DI G+ VIRG +VV+I L+
Sbjct: 53 EKNDI--GMVVIRGNSVVMIEALE 74
>gi|242040617|ref|XP_002467703.1| hypothetical protein SORBIDRAFT_01g032730 [Sorghum bicolor]
gi|241921557|gb|EER94701.1| hypothetical protein SORBIDRAFT_01g032730 [Sorghum bicolor]
Length = 81
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DKKL + L R ++GTL FDQF N V++ E + G+
Sbjct: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVE--VNGN 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
DI G+ VIRG +VV+I L+
Sbjct: 53 DKTDI--GMVVIRGNSVVMIEALE 74
>gi|224005396|ref|XP_002296349.1| human U6 snRNA-associated protein LSm8-like protein
[Thalassiosira pseudonana CCMP1335]
gi|209586381|gb|ACI65066.1| human U6 snRNA-associated protein LSm8-like protein
[Thalassiosira pseudonana CCMP1335]
Length = 106
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++++L+ + +K + +L DGR + G L +DQ N +L+ + E V D + + LGL+
Sbjct: 1 MASTLSDWTNKPVTILTCDGRLITGILLGYDQLQNLILQKSYESVYSSDSPVEKVELGLF 60
Query: 70 VIRGENVVLIGE 81
V+RG+NV ++G+
Sbjct: 61 VVRGDNVAVVGD 72
>gi|308806556|ref|XP_003080589.1| Small Nuclear ribonucleoprotein splicing factor (ISS)
[Ostreococcus tauri]
gi|116059050|emb|CAL54757.1| Small Nuclear ribonucleoprotein splicing factor (ISS)
[Ostreococcus tauri]
Length = 110
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVIR 72
+L + ++ VL DGR ++GTL FDQ N +LE ERV + + PLG+Y+IR
Sbjct: 7 ALGPMVHARVHVLTNDGRHVVGTLRGFDQVTNVILEDCAERVYSSESGVEEAPLGVYMIR 66
Query: 73 GENV 76
G+NV
Sbjct: 67 GDNV 70
>gi|443922213|gb|ELU41689.1| LSM domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 112
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 44 ANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEI 101
N V+E ER+ GD + DI G+Y+IRGENVVL+GE+ DE+P L V + EI
Sbjct: 19 TNLVMENTLERIYHGDAFADIRRGVYLIRGENVVLLGEVVNREDEVP--LRPVPIEEI 74
>gi|313227657|emb|CBY22804.1| unnamed protein product [Oikopleura dioica]
Length = 96
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
+S L + + K+ ++ DGR ++G L DQ N VL ERV + LGLY+
Sbjct: 1 MSAMLDALVGNKVEIVTNDGRVVVGILKGLDQVVNVVLANTEERVFTPEGVDRQALGLYL 60
Query: 71 IRGENVVLIGELD-----------LERDELPP 91
IRG+NV ++G +D ++ +LPP
Sbjct: 61 IRGDNVAVVGAVDENTELGMDFSTIKAQQLPP 92
>gi|358390848|gb|EHK40253.1| hypothetical protein TRIATDRAFT_252624 [Trichoderma atroviride
IMI 206040]
Length = 83
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L GRK++G L +D F N VL+ A E G+ I LG+ VI
Sbjct: 5 QPELKKYLDKRLFVQLNGGRKVIGVLRGYDVFLNVVLDEAVEEKDGGE---KIRLGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|402077934|gb|EJT73283.1| hypothetical protein GGTG_10128 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 101
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV---GDL-YCDIP-LGLY 69
L SY+DK++++L DGR +MGTL + D +N +L ER + GD D P +G
Sbjct: 5 LNSYVDKRVVILTTDGRFIMGTLVNSDNQSNVILTNVTERHVAPHDGDSDTVDRPSVGAE 64
Query: 70 VIRGENVVLIGELD 83
+IRG ++L+G LD
Sbjct: 65 IIRGATILLVGLLD 78
>gi|169860675|ref|XP_001836972.1| hypothetical protein CC1G_00108 [Coprinopsis cinerea
okayama7#130]
gi|116501694|gb|EAU84589.1| hypothetical protein CC1G_00108 [Coprinopsis cinerea
okayama7#130]
Length = 78
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L ++DKKL + L+ GRK+ GTL +D F N V++ A E G + P+G VIRG
Sbjct: 9 LKKFMDKKLFIHLQGGRKVSGTLRGYDLFLNLVIDDAVEETTPGQKH---PIGTVVIRGN 65
Query: 75 NVVLIGELDLER 86
+V + L+ R
Sbjct: 66 SVTSMETLEAIR 77
>gi|115453489|ref|NP_001050345.1| Os03g0410900 [Oryza sativa Japonica Group]
gi|37991869|gb|AAR06315.1| putative small nuclear ribonucleoprotein polypeptide G [Oryza
sativa Japonica Group]
gi|108708766|gb|ABF96561.1| small nuclear ribonucleoprotein G, putative, expressed [Oryza
sativa Japonica Group]
gi|113548816|dbj|BAF12259.1| Os03g0410900 [Oryza sativa Japonica Group]
gi|125544286|gb|EAY90425.1| hypothetical protein OsI_12008 [Oryza sativa Indica Group]
gi|125586635|gb|EAZ27299.1| hypothetical protein OsJ_11235 [Oryza sativa Japonica Group]
gi|215769229|dbj|BAH01458.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 80
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DKKL + L R ++GTL FDQF N V++ E + G+
Sbjct: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRVIVGTLRGFDQFMNLVVDNTVE--VNGN 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
DI G+ V+RG +VV+I L+
Sbjct: 53 DKTDI--GMVVVRGNSVVMIEALE 74
>gi|357159383|ref|XP_003578429.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
isoform 1 [Brachypodium distachyon]
gi|357159386|ref|XP_003578430.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
isoform 2 [Brachypodium distachyon]
Length = 81
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DKKL + + R ++GTL FDQF N V++ E + G+
Sbjct: 1 MSRSGQPPD------LKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVE--VNGN 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
DI G+ V+RG +VV+I L+
Sbjct: 53 EKTDI--GMVVVRGNSVVMIEALE 74
>gi|315046146|ref|XP_003172448.1| small nuclear ribonucleoprotein SmG [Arthroderma gypseum CBS
118893]
gi|327305055|ref|XP_003237219.1| small nuclear ribonucleoprotein SmG [Trichophyton rubrum CBS
118892]
gi|311342834|gb|EFR02037.1| small nuclear ribonucleoprotein SmG [Arthroderma gypseum CBS
118893]
gi|326460217|gb|EGD85670.1| small nuclear ribonucleoprotein SmG [Trichophyton rubrum CBS
118892]
gi|326472004|gb|EGD96013.1| small nuclear ribonucleoprotein SmG [Trichophyton tonsurans CBS
112818]
gi|326477131|gb|EGE01141.1| small nuclear ribonucleoprotein SmG [Trichophyton equinum CBS
127.97]
Length = 78
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L Y++K+L V L RK++G L +D F N VL+ A E G+ +PLG+ VI
Sbjct: 5 QPELKKYMEKRLFVQLNGNRKVIGVLRGYDVFMNIVLDDAVEEKNGGE---KVPLGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|344301944|gb|EGW32249.1| hypothetical protein SPAPADRAFT_50817 [Spathaspora passalidarum
NRRL Y-27907]
Length = 101
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-----IPLG 67
+ L ++ KK+ V+ D R G L +D N +L+ ER++ + D IPLG
Sbjct: 2 SDLKEFMGKKVHVITADARFFEGVLQGYDNSTNIILQDCIERILYSEEDVDEENQEIPLG 61
Query: 68 LYVIRGENVVLIGELD 83
LY+IRG V +GE+D
Sbjct: 62 LYIIRGGEVACVGEID 77
>gi|226509589|ref|NP_001148720.1| small nuclear ribonucleoprotein G [Zea mays]
gi|194698570|gb|ACF83369.1| unknown [Zea mays]
gi|195609740|gb|ACG26700.1| small nuclear ribonucleoprotein G [Zea mays]
gi|195621638|gb|ACG32649.1| small nuclear ribonucleoprotein G [Zea mays]
gi|195656303|gb|ACG47619.1| small nuclear ribonucleoprotein G [Zea mays]
gi|414867200|tpg|DAA45757.1| TPA: Small nuclear ribonucleoprotein G [Zea mays]
Length = 80
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DKKL + + R ++GTL FDQF N V++ E + G+
Sbjct: 1 MSRSGQPPD------LKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVE--VNGN 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
DI G+ VIRG +VV+I L+
Sbjct: 53 DKTDI--GMVVIRGNSVVMIEALE 74
>gi|448532461|ref|XP_003870428.1| hypothetical protein CORT_0F00690 [Candida orthopsilosis Co
90-125]
gi|380354783|emb|CCG24298.1| hypothetical protein CORT_0F00690 [Candida orthopsilosis]
Length = 101
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-----VGDLYCDIPLG 67
+ LA ++ KK+ V+ D R G L FD+ N +L + ER+I + + +IP G
Sbjct: 2 SELAPFVGKKVHVITTDARFFEGVLEGFDKNTNIILSNSIERIIYSTQEIDETNEEIPSG 61
Query: 68 LYVIRGENVVLIGELD 83
+ ++RG +V IGE+D
Sbjct: 62 VNIMRGNEIVCIGEID 77
>gi|302694279|ref|XP_003036818.1| hypothetical protein SCHCODRAFT_47419 [Schizophyllum commune
H4-8]
gi|300110515|gb|EFJ01916.1| hypothetical protein SCHCODRAFT_47419 [Schizophyllum commune
H4-8]
Length = 77
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L ++DKKL V L+ GRK+ GTL +D F N V++ A E G + P+G VIRG
Sbjct: 9 LKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDEALEETTPGQKH---PIGTVVIRGN 65
Query: 75 NVVLIGELD 83
+V + L+
Sbjct: 66 SVTSMETLE 74
>gi|225440849|ref|XP_002282193.1| PREDICTED: probable small nuclear ribonucleoprotein G [Vitis
vinifera]
gi|297740131|emb|CBI30313.3| unnamed protein product [Vitis vinifera]
Length = 80
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DKKL + L R ++GTL FDQF N V++ E + G+
Sbjct: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE--VNGN 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
DI G+ VIRG +VV + L+
Sbjct: 53 EKTDI--GMVVIRGNSVVTVEALE 74
>gi|393246263|gb|EJD53772.1| LSM-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 100
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 3 WAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC 62
+ P A ++DKKL V ++ GRK+ GTL FD F N VL+ A + +
Sbjct: 20 FPAPSQKSDEQGFAQFMDKKLFVHIQGGRKVSGTLRGFDIFLNLVLDDAQDESVPAQ--- 76
Query: 63 DIPLGLYVIRGENVVLIGELD 83
PLG VIRG +V + L+
Sbjct: 77 KAPLGTVVIRGNSVTSMETLE 97
>gi|225563396|gb|EEH11675.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 120
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 44 ANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGEL 82
AN VL+G ER+ G+L+ DI G+Y++RGENV+L+GE+
Sbjct: 7 ANLVLQGTVERLYAGNLFADIQRGIYLVRGENVLLLGEV 45
>gi|189203891|ref|XP_001938281.1| hypothetical protein PTRG_07949 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330924593|ref|XP_003300696.1| hypothetical protein PTT_12029 [Pyrenophora teres f. teres 0-1]
gi|187985380|gb|EDU50868.1| hypothetical protein PTRG_07949 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311325030|gb|EFQ91212.1| hypothetical protein PTT_12029 [Pyrenophora teres f. teres 0-1]
Length = 84
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YL+K++LV L RK+MG L +D + N VL+ A E V G+ + +G+ VI
Sbjct: 5 QPELKKYLEKRVLVQLNGSRKVMGILRGYDVYLNIVLDDALEEVAGGE---KVRIGMVVI 61
Query: 72 RGENVVLIGELDLERDELP 90
RG VV++ LD ++P
Sbjct: 62 RGNAVVMLEALDRINQDVP 80
>gi|224138462|ref|XP_002322820.1| predicted protein [Populus trichocarpa]
gi|222867450|gb|EEF04581.1| predicted protein [Populus trichocarpa]
Length = 80
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 1 MSWAG--PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG 58
MS +G PD L Y+DKKL + L R ++GTL FDQF N V++ + + G
Sbjct: 1 MSRSGQPPD-------LKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVD--VNG 51
Query: 59 DLYCDIPLGLYVIRGENVVLIGELD 83
D DI G+ VIRG +VV + L+
Sbjct: 52 DEKTDI--GMVVIRGNSVVTVEALE 74
>gi|356554080|ref|XP_003545377.1| PREDICTED: LOW QUALITY PROTEIN: N-alpha-acetyltransferase 38,
NatC auxiliary subunit-like [Glycine max]
Length = 116
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%)
Query: 19 LDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVL 78
L + + V+ DGR ++ L FDQ N +L+ + ERV + GLY+ RG+N+ +
Sbjct: 30 LTETISVITNDGRNILXVLKGFDQATNIILDESHERVYSTKEGVQLVFGLYINRGDNISV 89
Query: 79 IGELDLERD 87
+GELD + D
Sbjct: 90 VGELDEDLD 98
>gi|118483312|gb|ABK93558.1| unknown [Populus trichocarpa]
Length = 80
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 1 MSWAG--PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG 58
MS +G PD L Y+DKKL + L R ++GTL FDQF N V++ E + G
Sbjct: 1 MSRSGQPPD-------LKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE--VNG 51
Query: 59 DLYCDIPLGLYVIRGENVVLIGELD 83
D DI G+ V+RG +VV + L+
Sbjct: 52 DEKTDI--GMVVLRGNSVVTVEALE 74
>gi|401882753|gb|EJT46997.1| u6 snRNA-associated sm-like protein lsm8 [Trichosporon asahii var.
asahii CBS 2479]
Length = 166
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 23 LLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRGENVVLIGE 81
++V+L DGR ++G L D + N +L + ER D + I LGLY+I+G+NV LI E
Sbjct: 83 VIVILYDGRIIVGRLKGNDNYCNLILSDSVEREYSADKGVEMISLGLYMIKGDNVALIAE 142
Query: 82 LDLERD 87
+D ++D
Sbjct: 143 VDEDKD 148
>gi|170106101|ref|XP_001884262.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164640608|gb|EDR04872.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 78
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L ++DKKL V L+ GRK+ GTL +D F N V++ A E + P+G VIRG
Sbjct: 9 LKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDDAIEETTPAQKH---PIGTVVIRGN 65
Query: 75 NVVLIGELDLER 86
+V + L+ R
Sbjct: 66 SVTSMETLEATR 77
>gi|15229773|ref|NP_187757.1| small nuclear ribonucleoprotein G [Arabidopsis thaliana]
gi|297833932|ref|XP_002884848.1| hypothetical protein ARALYDRAFT_478489 [Arabidopsis lyrata subsp.
lyrata]
gi|12322914|gb|AAG51452.1|AC008153_25 putative small nuclear ribonucleoprotein polypeptide G;
65009-64161 [Arabidopsis thaliana]
gi|17065484|gb|AAL32896.1| putative small nuclear ribonucleoprotein polypeptide G
[Arabidopsis thaliana]
gi|24899751|gb|AAN65090.1| putative small nuclear ribonucleoprotein polypeptide G
[Arabidopsis thaliana]
gi|297330688|gb|EFH61107.1| hypothetical protein ARALYDRAFT_478489 [Arabidopsis lyrata subsp.
lyrata]
gi|332641534|gb|AEE75055.1| small nuclear ribonucleoprotein G [Arabidopsis thaliana]
Length = 79
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 1 MSWAG--PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG 58
MS +G PD L Y+DKKL + L R ++GTL FDQF N V++ E + G
Sbjct: 1 MSRSGQPPD-------LKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE--VNG 51
Query: 59 DLYCDIPLGLYVIRGENVVLIGELD 83
D DI G+ VIRG ++V + L+
Sbjct: 52 DDKTDI--GMVVIRGNSIVTVEALE 74
>gi|218197373|gb|EEC79800.1| hypothetical protein OsI_21233 [Oryza sativa Indica Group]
Length = 136
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 45/125 (36%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERV----- 55
M+ AGP L S +D+ + V+ DGR ++GTL FDQ N +L+ + ERV
Sbjct: 1 MASAGP-------GLESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTRY 53
Query: 56 ---------------IVGDL------------YC------DIPLGLYVIRGENVVLIGEL 82
++G L +C + LGLY+IRG+N+ ++GE+
Sbjct: 54 VLVNCDLLPGLLSNALIGSLVQNSAISNKFLSWCLKEGVQQLVLGLYIIRGDNISVVGEV 113
Query: 83 DLERD 87
D E D
Sbjct: 114 DEELD 118
>gi|222632782|gb|EEE64914.1| hypothetical protein OsJ_19774 [Oryza sativa Japonica Group]
Length = 136
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 45/125 (36%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERV----- 55
M+ AGP L S +D+ + V+ DGR ++GTL FDQ N +L+ + ERV
Sbjct: 1 MASAGP-------GLESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTRY 53
Query: 56 ---------------IVGDL------------YC------DIPLGLYVIRGENVVLIGEL 82
++G L +C + LGLY+IRG+N+ ++GE+
Sbjct: 54 VLVNCDLLPGLLSNALIGSLVQNSAISNKFLSWCLKDGVQQLVLGLYIIRGDNISVVGEV 113
Query: 83 DLERD 87
D E D
Sbjct: 114 DEELD 118
>gi|183232189|ref|XP_001913674.1| U6 snRNA-associated Sm-like protein LSm8 [Entamoeba histolytica
HM-1:IMSS]
gi|169802157|gb|EDS89550.1| U6 snRNA-associated Sm-like protein LSm8, putative [Entamoeba
histolytica HM-1:IMSS]
gi|407034977|gb|EKE37474.1| LSM domain containing protein [Entamoeba nuttalli P19]
gi|449708988|gb|EMD48345.1| U6 snrnaassociated Sm family LSm8 protein [Entamoeba histolytica
KU27]
Length = 94
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
+ Y++KK+ V+ G+ +G L +D F N VL+ + ER + +I GL ++RG+
Sbjct: 4 VKEYINKKVEVVTTLGKVYIGILTGYDNFMNIVLKNSIERTFSKEGVSNISCGLLILRGD 63
Query: 75 NVVLIGELDLERD 87
+++IG L+ E+D
Sbjct: 64 EIMVIGGLNEEKD 76
>gi|426195723|gb|EKV45652.1| hypothetical protein AGABI2DRAFT_72502 [Agaricus bisporus var.
bisporus H97]
Length = 78
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L Y+DKKL V L+ GRK+ GTL +D F N V++ A E + P+G VIRG
Sbjct: 9 LKKYMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDDAIEETTPAQKH---PIGQVVIRGN 65
Query: 75 NVVLIGELDLER 86
+V + L+ R
Sbjct: 66 SVTSMETLEAIR 77
>gi|302763963|ref|XP_002965403.1| hypothetical protein SELMODRAFT_83281 [Selaginella
moellendorffii]
gi|300167636|gb|EFJ34241.1| hypothetical protein SELMODRAFT_83281 [Selaginella
moellendorffii]
Length = 91
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 25 VLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP-LGLYVIRGENVVLIGELD 83
V+ DGR ++G L +DQ N +++ + ERV + LGLY+IRG+N+ ++GELD
Sbjct: 8 VITNDGRNIVGMLKGYDQATNLIIDESHERVYSTTTGVEQHVLGLYIIRGDNIAVVGELD 67
Query: 84 LE 85
E
Sbjct: 68 DE 69
>gi|340500920|gb|EGR27754.1| U6 snRNA-associated SM protein LSM8, putative [Ichthyophthirius
multifiliis]
Length = 106
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
M + + + L L KK+ ++ DGR L+G L DQ N+VL ERV +
Sbjct: 1 MEEKKNNQMKILNPLEKLLFKKVQIVTSDGRILVGILKGLDQALNSVLSECTERVYSLEQ 60
Query: 61 YCDI-PLGLYVIRGENVVLIGELD 83
+GLYV+RG+NV LIGELD
Sbjct: 61 GVQFNKIGLYVLRGDNVCLIGELD 84
>gi|297299237|ref|XP_001090589.2| PREDICTED: u6 snRNA-associated Sm-like protein LSm1 isoform 1
[Macaca mulatta]
Length = 144
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQF-------ANAVLEGACERVIVGDLYCD- 63
+ SL +DKK LVLLRDGR L+G L S DQF + + A VG
Sbjct: 7 TASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFEMPEFCLKDDDDDTALSNKTVGKKQQQQ 66
Query: 64 ---IPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEI 101
+ ++G+ V+L+GE+DLE++ P L VS+ EI
Sbjct: 67 HELLSERFVAVKGKRVLLVGEIDLEKESDTP-LQQVSIEEI 106
>gi|453085821|gb|EMF13864.1| LSM-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 84
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK++ V L RK+MGTL +D F N VL+ A E G+ + LG+ VI
Sbjct: 5 QPELKKYLDKRVEVQLNGSRKVMGTLRGYDVFLNIVLDEATESKPNGE---KVRLGMCVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ LD
Sbjct: 62 RGNSVVMLEALD 73
>gi|449451158|ref|XP_004143329.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Cucumis sativus]
gi|449482341|ref|XP_004156252.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Cucumis sativus]
Length = 80
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DKKL + L R ++GTL FDQF N V++ E + G+
Sbjct: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRLVIGTLRGFDQFMNLVVDNTVE--VNGN 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
DI G+ VIRG +VV + L+
Sbjct: 53 EKTDI--GMVVIRGNSVVTVEALE 74
>gi|302837889|ref|XP_002950503.1| hypothetical protein VOLCADRAFT_90948 [Volvox carteri f.
nagariensis]
gi|300264052|gb|EFJ48249.1| hypothetical protein VOLCADRAFT_90948 [Volvox carteri f.
nagariensis]
Length = 100
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI--PLGLYV 70
T LAS + ++ V+ DG+ +G L +DQ N +L+ ERV I G+Y
Sbjct: 6 TGLASLVGTQISVITNDGKHYVGILRGYDQATNLLLQECQERVYSTKSGVQIIQNPGVYC 65
Query: 71 IRGENVVLIGELDLERD 87
IRG+NV ++GE+D E D
Sbjct: 66 IRGDNVAVVGEVDEEAD 82
>gi|356538387|ref|XP_003537685.1| PREDICTED: probable small nuclear ribonucleoprotein G [Glycine
max]
gi|255630063|gb|ACU15385.1| unknown [Glycine max]
Length = 79
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DKKL + L R ++GTL FDQF N V++ E + G+
Sbjct: 1 MSRSGQPPD------LKKYMDKKLQIKLNGNRMIVGTLRGFDQFMNLVVDNTVE--VNGN 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
DI G+ VIRG +VV + L+
Sbjct: 53 EKNDI--GMVVIRGNSVVTVEALE 74
>gi|356505386|ref|XP_003521472.1| PREDICTED: probable small nuclear ribonucleoprotein G [Glycine
max]
gi|356572580|ref|XP_003554446.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Glycine max]
gi|255625815|gb|ACU13252.1| unknown [Glycine max]
Length = 79
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DKKL + L R ++GTL FDQF N V++ E + G+
Sbjct: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE--VNGN 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
DI G+ VIRG +VV + L+
Sbjct: 53 EKNDI--GMVVIRGNSVVTVEALE 74
>gi|195606768|gb|ACG25214.1| small nuclear ribonucleoprotein G [Zea mays]
Length = 80
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DKKL + + R ++GTL FDQF N V++ E + G+
Sbjct: 1 MSRSGQPPD------LKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNIVE--VNGN 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
DI G+ VIRG +VV+I L+
Sbjct: 53 DKTDI--GMVVIRGNSVVMIEALE 74
>gi|323454582|gb|EGB10452.1| hypothetical protein AURANDRAFT_9439, partial [Aureococcus
anophagefferens]
Length = 62
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 10/72 (13%)
Query: 2 SWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLY 61
S GPD L Y++K+LL+ R RKL+GTL +DQF N V+E A E+V L
Sbjct: 1 SGKGPD-------LKRYMEKRLLIKARARRKLVGTLRGYDQFMNLVVEDAIEQV---SLT 50
Query: 62 CDIPLGLYVIRG 73
+G VIRG
Sbjct: 51 EKNEIGTVVIRG 62
>gi|168067143|ref|XP_001785484.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662891|gb|EDQ49691.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 77
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 48/88 (54%), Gaps = 13/88 (14%)
Query: 1 MSWAG--PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG 58
MS +G PD L Y+DKKL + L GR ++G L FDQF N VL+ E I G
Sbjct: 1 MSKSGQPPD-------LKKYMDKKLNIKLNAGRNVVGVLRGFDQFMNLVLDNTVE--ING 51
Query: 59 DLYCDIPLGLYVIRGENVVLIGELDLER 86
+I G+ VIRG +VV+I L+ R
Sbjct: 52 ADRNEI--GMVVIRGNSVVMIEALEAVR 77
>gi|66770947|gb|AAY54785.1| IP05148p [Drosophila melanogaster]
Length = 99
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 19 LDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
+DKKL+VLLRDGR L+G L S DQFAN VL+ ER+ G
Sbjct: 34 VDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIPCGQ 74
>gi|429962956|gb|ELA42500.1| hypothetical protein VICG_00599 [Vittaforma corneae ATCC 50505]
Length = 126
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
YL+K ++VLL+D L G S+DQ+ + L ER+ Y + GL VIRG
Sbjct: 24 EFVEYLEKNVVVLLKDDIYLYGVFKSYDQYNSITLNYVLERIFHEGAYAERRQGLMVIRG 83
Query: 74 ENVVLIG 80
E+++ IG
Sbjct: 84 ESIIFIG 90
>gi|281350809|gb|EFB26393.1| hypothetical protein PANDA_005681 [Ailuropoda melanoleuca]
Length = 74
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 33 LMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRGENVVLIGELDLERD 87
L GTL FDQ N +L+ + ERV + + LGLY++RG+NV +IGE+D E D
Sbjct: 1 LQGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETD 56
>gi|18312179|ref|NP_558846.1| small nuclear ribonucleoprotein (Sm-like) [Pyrobaculum aerophilum
str. IM2]
gi|18159615|gb|AAL63028.1| small nuclear ribonucleoprotein homolog (Sm-like) [Pyrobaculum
aerophilum str. IM2]
Length = 80
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
L +L + K++LV LRD ++ G L SFDQ N +LE A E +I G++Y G V
Sbjct: 12 LGATLQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDA-EEIIDGNVY---KRGTMV 67
Query: 71 IRGENVVLI 79
+RGENV+ I
Sbjct: 68 VRGENVLFI 76
>gi|134126|sp|P24715.1|RUXG_MEDSA RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|19573|emb|CAA44975.1| snRNP-related protein [Medicago sativa]
Length = 81
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
+L Y+DK+L + L+ R ++GTL FDQF N V++ E + G+ DI G+ VIRG
Sbjct: 9 ALKKYMDKQLQINLKANRMIVGTLRGFDQFMNLVVDNTVE--VNGNEKNDI--GMVVIRG 64
Query: 74 ENVVLIGELD 83
+VV + L+
Sbjct: 65 NSVVTVEALE 74
>gi|147806402|emb|CAN67622.1| hypothetical protein VITISV_014712 [Vitis vinifera]
Length = 148
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L Y+DKKL + L R ++GTL FDQF N V++ E + G+ DI G+ VIRG
Sbjct: 10 LKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE--VNGNEKTDI--GMVVIRGN 65
Query: 75 NVVLIGELD 83
+VV + L+
Sbjct: 66 SVVTVEALE 74
>gi|14277786|pdb|1I8F|A Chain A, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277787|pdb|1I8F|B Chain B, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277788|pdb|1I8F|C Chain C, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277789|pdb|1I8F|D Chain D, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277790|pdb|1I8F|E Chain E, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277791|pdb|1I8F|F Chain F, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277792|pdb|1I8F|G Chain G, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|29726402|pdb|1LNX|A Chain A, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726403|pdb|1LNX|B Chain B, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726404|pdb|1LNX|C Chain C, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726405|pdb|1LNX|D Chain D, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726406|pdb|1LNX|E Chain E, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726407|pdb|1LNX|F Chain F, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726408|pdb|1LNX|G Chain G, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
Length = 81
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
L +L + K++LV LRD ++ G L SFDQ N +LE A E +I G++Y G V
Sbjct: 12 LGATLQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDA-EEIIDGNVY---KRGTMV 67
Query: 71 IRGENVVLI 79
+RGENV+ I
Sbjct: 68 VRGENVLFI 76
>gi|452842262|gb|EME44198.1| hypothetical protein DOTSEDRAFT_71875 [Dothistroma septosporum
NZE10]
Length = 85
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
L YLDK++ V L RK+MGTL +D F N VL+ A E G+ LG+ VIRG
Sbjct: 7 ELKKYLDKRVEVQLNGSRKVMGTLRGYDVFLNIVLDEATESKPNGE---KARLGMCVIRG 63
Query: 74 ENVVLIGELD 83
+VV++ LD
Sbjct: 64 NSVVMMEALD 73
>gi|440465117|gb|ELQ34457.1| hypothetical protein OOU_Y34scaffold00765g3 [Magnaporthe oryzae
Y34]
gi|440480508|gb|ELQ61168.1| hypothetical protein OOW_P131scaffold01199g49 [Magnaporthe oryzae
P131]
Length = 153
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 10/72 (13%)
Query: 45 NAVLEGACERVIVGD--------LYCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHV 96
N VL+ ER+ V LY DI GL+++RGENV+L+GE+DL++D+ PP
Sbjct: 51 NLVLQSTVERLFVPPSPSTGERGLYADISRGLFLVRGENVLLLGEIDLDKDDDPP--AGY 108
Query: 97 SVAEIKRVSALF 108
AE++ V +L
Sbjct: 109 DKAELQVVESLL 120
>gi|390601213|gb|EIN10607.1| like-Sm ribonucleo protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 77
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L ++DKKL V L+ GRK+ GTL +D F N V++ A E + PLG VIRG
Sbjct: 9 LKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDDALEETTPAQKH---PLGTVVIRGN 65
Query: 75 NVVLIGELD 83
+V + L+
Sbjct: 66 SVTSMETLE 74
>gi|224004692|ref|XP_002295997.1| human U6 snRNA-associated Sm-like protein LSm8-like protein
[Thalassiosira pseudonana CCMP1335]
gi|209586029|gb|ACI64714.1| human U6 snRNA-associated Sm-like protein LSm8-like protein
[Thalassiosira pseudonana CCMP1335]
Length = 106
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++++L+ + +K + +L DGR + G L +DQ N +L+ + E V D + + LGL+
Sbjct: 1 MASTLSDWTNKPVTILTCDGRLITGILLGYDQLQNLILQKSYESVYSLDSPVEKVELGLF 60
Query: 70 VIRGENVVLIGE 81
V+RG+NV ++G+
Sbjct: 61 VVRGDNVAVVGD 72
>gi|302404042|ref|XP_002999859.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261361361|gb|EEY23789.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 85
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L GRK++G L +D F N VL+ A E G+ + +G+ VI
Sbjct: 5 QPELKKYLDKRLFVQLNGGRKVIGVLRGYDVFLNIVLDEAVEEKEGGE---KVRIGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|389631877|ref|XP_003713591.1| hypothetical protein MGG_04539 [Magnaporthe oryzae 70-15]
gi|351645924|gb|EHA53784.1| hypothetical protein MGG_04539 [Magnaporthe oryzae 70-15]
gi|440467862|gb|ELQ37056.1| hypothetical protein OOU_Y34scaffold00619g29 [Magnaporthe oryzae
Y34]
gi|440478608|gb|ELQ59427.1| hypothetical protein OOW_P131scaffold01358g67 [Magnaporthe oryzae
P131]
Length = 101
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV---GDL-YCDIP-LGLY 69
L SY+DK+++++ DGR L+GTL + D AN +L ER I GD D P +G
Sbjct: 5 LNSYVDKRVVIMTTDGRMLIGTLINSDNQANIILYNVTERHIAPADGDEDSVDRPSVGTE 64
Query: 70 VIRGENVVLIGELDLE 85
+IRG ++++G +D E
Sbjct: 65 IIRGSTILVVGLVDEE 80
>gi|444520194|gb|ELV12928.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Tupaia
chinensis]
Length = 106
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 23 LLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRGENVVLIGE 81
L V +R + GTL FDQ N +L+ + ERV + + LGLY++RG+NV +IGE
Sbjct: 23 LNVAIRAQKCYQGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGE 82
Query: 82 LDLERD 87
+D E D
Sbjct: 83 IDEETD 88
>gi|357122008|ref|XP_003562708.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Brachypodium distachyon]
Length = 80
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DKKL + L R ++GTL FDQF N V++ E + G+
Sbjct: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVE--VNGN 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
DI G+ V+RG +VV+I L+
Sbjct: 53 DRNDI--GMVVLRGNSVVMIEALE 74
>gi|237833195|ref|XP_002365895.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211963559|gb|EEA98754.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221488357|gb|EEE26571.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii GT1]
gi|221508860|gb|EEE34429.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii VEG]
Length = 96
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++ L + +D+K+ ++ DGR +GTL FDQ N +L+ ER+ D + I LGLY
Sbjct: 1 MAQVLQTLVDQKVEIVTVDGRVFVGTLKGFDQSTNLILDKCEERIYSVDAAVEQIALGLY 60
Query: 70 VIRGENV 76
+IRG+N+
Sbjct: 61 LIRGDNI 67
>gi|396471648|ref|XP_003838919.1| similar to small nuclear ribonucleoprotein G [Leptosphaeria
maculans JN3]
gi|312215488|emb|CBX95440.1| similar to small nuclear ribonucleoprotein G [Leptosphaeria
maculans JN3]
Length = 84
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YL+K++LV L RK+MG L +D + N VL+ A E G+ + +G+ VI
Sbjct: 5 QPELKKYLEKRVLVQLNGSRKVMGILRGYDVYLNIVLDEALEEKAGGE---KVRIGMVVI 61
Query: 72 RGENVVLIGELDLERDELP 90
RG +VV++ LD ++P
Sbjct: 62 RGNSVVMLEALDRINQDVP 80
>gi|213404670|ref|XP_002173107.1| small nuclear ribonucleoprotein [Schizosaccharomyces japonicus
yFS275]
gi|212001154|gb|EEB06814.1| small nuclear ribonucleoprotein [Schizosaccharomyces japonicus
yFS275]
Length = 77
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 4 AGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD 63
A PD L YLDK++ V L RK+ G L +D F N V+E A E G+
Sbjct: 5 AAPD-------LKKYLDKQVFVQLNGSRKVYGVLRGYDIFLNIVVEDAYEEKSTGE---K 54
Query: 64 IPLGLYVIRGENVVLIGELD 83
P+G IRG +V++I LD
Sbjct: 55 APIGSAAIRGNSVIMIEALD 74
>gi|119603941|gb|EAW83535.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Homo sapiens]
gi|119603942|gb|EAW83536.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Homo sapiens]
gi|344252438|gb|EGW08542.1| U6 snRNA-associated Sm-like protein LSm8 [Cricetulus griseus]
Length = 75
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 33 LMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRGENVVLIGELDLERD 87
++GTL FDQ N +L+ + ERV + + LGLY++RG+NV +IGE+D E D
Sbjct: 2 IVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETD 57
>gi|389746943|gb|EIM88122.1| like-Sm ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 77
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L ++DKKL V L+ GRK+ GTL +D F N V++ A E + P+G VIRG
Sbjct: 9 LKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDDAIEETTPAQKH---PIGTVVIRGN 65
Query: 75 NVVLIGELD 83
+V + L+
Sbjct: 66 SVTSMETLE 74
>gi|238606585|ref|XP_002396755.1| hypothetical protein MPER_02947 [Moniliophthora perniciosa FA553]
gi|215469902|gb|EEB97685.1| hypothetical protein MPER_02947 [Moniliophthora perniciosa FA553]
Length = 97
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 44 ANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLER-DELPPHLTHVSVAEIK 102
N VLE ER+ G+ + + GL++IRGENVVL+GE+DL++ DE+P + E
Sbjct: 3 TNLVLEDTVERIYHGNAFAESWHGLFLIRGENVVLLGEIDLDQEDEVP-----LRQVEYN 57
Query: 103 RVSALFFSLLFLSLHKRCCLLTMRYEIMGRS 133
++ + + HK + YE G S
Sbjct: 58 QLQPYHKDEIQVKKHKDEIKAHILYETKGFS 88
>gi|357511115|ref|XP_003625846.1| hypothetical protein MTR_7g104930 [Medicago truncatula]
gi|87240819|gb|ABD32677.1| Like-Sm ribonucleoprotein-related, core [Medicago truncatula]
gi|355500861|gb|AES82064.1| hypothetical protein MTR_7g104930 [Medicago truncatula]
Length = 80
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DK+L + L R ++GTL FDQF N V++ E + G+
Sbjct: 1 MSRSGQPPD------LKKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVE--VNGN 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
DI G+ VIRG +VV + L+
Sbjct: 53 EKNDI--GMVVIRGNSVVTVEALE 74
>gi|168049678|ref|XP_001777289.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671391|gb|EDQ57944.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 76
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 11/85 (12%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+D+KL + L GR ++G L FDQF N VL+ E + G
Sbjct: 1 MSKSGQPPD------LKKYMDRKLNIKLNAGRNVVGVLRGFDQFMNLVLDNTVE--VQGA 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELDL 84
+I G+ VIRG +VV+I L++
Sbjct: 53 EKNEI--GMVVIRGNSVVMIEALEV 75
>gi|380478035|emb|CCF43823.1| LSM domain-containing protein [Colletotrichum higginsianum]
Length = 108
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L RK++G L +D F N VL+ A E G+ + LG+ VI
Sbjct: 5 QPELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKEGGE---KVRLGMVVI 61
Query: 72 RGENVVLIGELDL--ERDELPPHLTHVS 97
RG +VV++ L+ R PP + S
Sbjct: 62 RGNSVVMLEALERIGGRRPQPPAVNGES 89
>gi|15224075|ref|NP_179971.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|297821653|ref|XP_002878709.1| hypothetical protein ARALYDRAFT_900880 [Arabidopsis lyrata subsp.
lyrata]
gi|6094211|sp|O82221.1|RUXG_ARATH RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|3738322|gb|AAC63663.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|21593829|gb|AAM65796.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|25083131|gb|AAN72046.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|30102776|gb|AAP21306.1| At2g23930 [Arabidopsis thaliana]
gi|297324548|gb|EFH54968.1| hypothetical protein ARALYDRAFT_900880 [Arabidopsis lyrata subsp.
lyrata]
gi|330252409|gb|AEC07503.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
Length = 80
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DKKL + L R + GTL FDQF N V++ E + G+
Sbjct: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRMVTGTLRGFDQFMNLVVDNTVE--VNGN 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
DI G+ VIRG ++V + L+
Sbjct: 53 DKTDI--GMVVIRGNSIVTVEALE 74
>gi|146168016|ref|XP_001470817.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|146145232|gb|EDK31689.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 107
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 9 VYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLG 67
+ L L L KK+ ++ DG+ L+G L DQ N++L ERV + I G
Sbjct: 11 IKLLNPLEKLLFKKIQIITTDGKVLIGILKGLDQALNSILSDCVERVFSSENNTKTIKHG 70
Query: 68 LYVIRGENVVLIGELDLE 85
LY++RG+N+ ++GE+D E
Sbjct: 71 LYLLRGDNIAVLGEVDEE 88
>gi|238498242|ref|XP_002380356.1| small nuclear ribonucleoprotein Lsm8, putative [Aspergillus
flavus NRRL3357]
gi|220693630|gb|EED49975.1| small nuclear ribonucleoprotein Lsm8, putative [Aspergillus
flavus NRRL3357]
Length = 85
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 29 DGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGLYVIRGENVVLIGELD 83
DGR L+GTL S DQ N VL ER+I + I GLY+IRG+NVV+ GE+D
Sbjct: 4 DGRTLLGTLLSTDQLTNLVLLDTIERIIRTPDDPEPSSQIEHGLYLIRGDNVVVCGEVD 62
>gi|401408539|ref|XP_003883718.1| U6 snRNA-associated protein LSm8-like protein,related [Neospora
caninum Liverpool]
gi|325118135|emb|CBZ53686.1| U6 snRNA-associated protein LSm8-like protein,related [Neospora
caninum Liverpool]
Length = 115
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++ L + +D+K+ ++ DGR +GTL FDQ N +L+ ER+ D + I LGLY
Sbjct: 1 MAQVLQTLVDQKVEIVTVDGRVFVGTLKGFDQSTNLILDKCEERIYSLDAAVEQIALGLY 60
Query: 70 VIRGENV 76
+IRG+N+
Sbjct: 61 LIRGDNI 67
>gi|443719153|gb|ELU09428.1| hypothetical protein CAPTEDRAFT_156804 [Capitella teleta]
Length = 76
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L Y+DK+L + L GR + GTL FD F N V++ A E+ G+
Sbjct: 1 MSKAHPPE------LKKYMDKRLTLKLNGGRVVTGTLRGFDPFMNLVVDEAIEQCKTGEQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ V+RG ++ L+ LD
Sbjct: 55 NS---IGMVVVRGNSITLLEALD 74
>gi|119872589|ref|YP_930596.1| like-Sm ribonucleoprotein, core [Pyrobaculum islandicum DSM 4184]
gi|119673997|gb|ABL88253.1| Small nuclear ribonucleoprotein, LSM family [Pyrobaculum
islandicum DSM 4184]
Length = 80
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
L +L + K++LV LRD ++ G L SFDQ N +L+ A E +I G++Y G V
Sbjct: 12 LGATLQDAIGKQVLVKLRDSHEIRGILRSFDQHVNLLLDDA-EEIIDGNVY---KRGTIV 67
Query: 71 IRGENVVLI 79
IRGENV+ I
Sbjct: 68 IRGENVLFI 76
>gi|409049871|gb|EKM59348.1| hypothetical protein PHACADRAFT_169890 [Phanerochaete carnosa
HHB-10118-sp]
Length = 77
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L ++DKKL V L+ GRK+ G L +D F N VL+ A E + P+G VIRG
Sbjct: 9 LKKFMDKKLFVHLQGGRKVSGVLRGYDLFLNLVLDDALEETTPAQKH---PIGTVVIRGN 65
Query: 75 NVVLIGELDLER 86
+V + L+ R
Sbjct: 66 SVTSMETLEATR 77
>gi|413918445|gb|AFW58377.1| hypothetical protein ZEAMMB73_585309 [Zea mays]
Length = 70
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 13 TSLASYL-DKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC 62
T+ SYL +KL+VLLRDGRKL+GTLCSFDQF C + ++C
Sbjct: 21 TNFFSYLISEKLIVLLRDGRKLLGTLCSFDQFGIPFCSHFCA--VFSSIFC 69
>gi|145590308|ref|YP_001152310.1| like-Sm ribonucleoprotein, core [Pyrobaculum arsenaticum DSM
13514]
gi|379005411|ref|YP_005261083.1| Small nuclear ribonucleoprotein-like (snRNP) [Pyrobaculum
oguniense TE7]
gi|145282076|gb|ABP49658.1| Small nuclear ribonucleoprotein, LSM family [Pyrobaculum
arsenaticum DSM 13514]
gi|375160864|gb|AFA40476.1| Small nuclear ribonucleoprotein-like (snRNP) [Pyrobaculum
oguniense TE7]
Length = 80
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
L +L + K++LV LRD ++ G L SFDQ N +LE A E +I G+++ G V
Sbjct: 12 LGATLQDSIGKQVLVKLRDSHEIRGVLRSFDQHVNLLLEDA-EEIIDGNVF---KRGTIV 67
Query: 71 IRGENVVLI 79
+RGENV+ I
Sbjct: 68 VRGENVLFI 76
>gi|388493710|gb|AFK34921.1| unknown [Medicago truncatula]
Length = 81
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DK+L + L R ++GTL FDQF N V++ E + G+
Sbjct: 1 MSRSGQPPD------LEKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVE--VNGN 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
DI G+ VIRG +VV + L+
Sbjct: 53 EKNDI--GMVVIRGNSVVTVEALE 74
>gi|451850030|gb|EMD63333.1| hypothetical protein COCSADRAFT_38193 [Cochliobolus sativus
ND90Pr]
gi|452001852|gb|EMD94311.1| hypothetical protein COCHEDRAFT_1170230 [Cochliobolus
heterostrophus C5]
Length = 84
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YL+K++LV L RK+MG L +D + N VL+ A E G+ + +G+ VI
Sbjct: 5 QPELKKYLEKRVLVQLNGSRKVMGILRGYDVYLNIVLDEALEEKAGGE---KVRIGMVVI 61
Query: 72 RGENVVLIGELDLERDELP 90
RG VV++ LD ++P
Sbjct: 62 RGNAVVMLEALDRINQDVP 80
>gi|400600902|gb|EJP68570.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 255
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-PLGLYVIRG 73
L Y+DK++ V GR++MGTL FD N VL+ E V + PLGL V+RG
Sbjct: 171 LTKYMDKQITVKFNGGREVMGTLKGFDALMNLVLDDVQETVRDEEGNESTRPLGLVVVRG 230
Query: 74 ENVVLIGELD 83
+VLI +D
Sbjct: 231 TLLVLISPVD 240
>gi|156405713|ref|XP_001640876.1| predicted protein [Nematostella vectensis]
gi|156228012|gb|EDO48813.1| predicted protein [Nematostella vectensis]
Length = 77
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L Y+DKKL + L GR + G L +D F N VL+ A E V +
Sbjct: 1 MSKAHPPE------LKKYMDKKLSLKLNGGRHVSGVLRGYDPFMNLVLDDAVENVSGNEK 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+ +G+ VIRG ++V + LD
Sbjct: 55 HA---IGMVVIRGNSIVTMEALD 74
>gi|19113214|ref|NP_596422.1| U4/U6 x U5 tri-snRNP complex Sm snRNP core protein Smg1
[Schizosaccharomyces pombe 972h-]
gi|6094213|sp|O74966.1|RUXG_SCHPO RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|3169092|emb|CAA19285.1| U4/U6 x U5 tri-snRNP complex Sm snRNP core protein Smg1
[Schizosaccharomyces pombe]
Length = 77
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS AG D L YLD+++ V L RK+ G L +D F N VLE + E + G+
Sbjct: 1 MSKAGAPD------LKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIEEKVDGE- 53
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+ +G IRG +V++I LD
Sbjct: 54 --KVKIGSVAIRGNSVIMIETLD 74
>gi|452979544|gb|EME79306.1| hypothetical protein MYCFIDRAFT_71922 [Pseudocercospora fijiensis
CIRAD86]
Length = 84
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
L YLDK++ V L RK+MGTL +D F N VL+ A E + + LG+ VIRG
Sbjct: 7 ELKKYLDKRVEVQLNGSRKVMGTLRGYDVFLNIVLDEATESKPNNE---KVRLGMCVIRG 63
Query: 74 ENVVLIGELD 83
+VV++ LD
Sbjct: 64 NSVVMMEALD 73
>gi|449299266|gb|EMC95280.1| hypothetical protein BAUCODRAFT_577920 [Baudoinia compniacensis
UAMH 10762]
Length = 83
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK++ V L RK+MGTL +D F N VL+ A E + + LG+ VI
Sbjct: 5 QPELKKYLDKRVEVQLNGSRKVMGTLRGYDVFLNIVLDEATESKPNNE---KVRLGMCVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ LD
Sbjct: 62 RGNSVVMMEALD 73
>gi|443924143|gb|ELU43214.1| LSM domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 74
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 33 LMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLYVIRGENVVLIGELD 83
+ GTL FDQ +N VL + ER+ + + ++PLGLY+++G+ + LIGE+D
Sbjct: 1 MQGTLVGFDQRSNVVLSDSVERIYSIEEGVEEVPLGLYLVKGDMIALIGEMD 52
>gi|339245769|ref|XP_003374518.1| putative small nuclear ribonucleoprotein G [Trichinella spiralis]
gi|316972305|gb|EFV55988.1| putative small nuclear ribonucleoprotein G [Trichinella spiralis]
Length = 76
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L Y+DKK+ + L RK+ G L FD F N V++ A E + G+
Sbjct: 1 MSKAHPPE------LKKYMDKKMQLRLNGDRKISGVLRGFDPFMNMVIDEAVEHLKTGE- 53
Query: 61 YCDIPLGLYVIRGENVVLI 79
I +G+ V+RG +V L+
Sbjct: 54 --QIMIGMVVVRGNSVTLM 70
>gi|171694560|ref|XP_001912204.1| hypothetical protein [Podospora anserina S mat+]
gi|170947522|emb|CAP59683.1| unnamed protein product [Podospora anserina S mat+]
Length = 85
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L RK++G L +D F N V++ A E G+ + LG+ VI
Sbjct: 5 QPELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVMDDAVEEKDGGE---KVKLGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|171184523|ref|YP_001793442.1| like-Sm ribonucleoprotein core [Pyrobaculum neutrophilum V24Sta]
gi|170933735|gb|ACB38996.1| Like-Sm ribonucleoprotein core [Pyrobaculum neutrophilum V24Sta]
Length = 80
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
L +L + K++LV LRD ++ G L SFDQ N +L+ A E +I G++Y G V
Sbjct: 12 LGATLQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLDDA-EEIIDGNVY---KRGTIV 67
Query: 71 IRGENVVLI 79
+RGENV+ I
Sbjct: 68 VRGENVLFI 76
>gi|388514393|gb|AFK45258.1| unknown [Medicago truncatula]
Length = 81
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DK+L + L R ++GTL FDQF N V++ E + G+
Sbjct: 1 MSRSGQPPD------LKKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVE--VNGN 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
DI G+ VIRG +VV + L+
Sbjct: 53 EKNDI--GMVVIRGNSVVTVEALE 74
>gi|391346676|ref|XP_003747595.1| PREDICTED: small nuclear ribonucleoprotein G-like [Metaseiulus
occidentalis]
Length = 76
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L Y+DK L + L R + G L FD F N VLE A E V G
Sbjct: 1 MSKAHPPE------LKKYMDKSLSLRLNGSRVVSGILRGFDPFMNIVLEEAFEEVKGGQ- 53
Query: 61 YCDIPLGLYVIRGENVVLI 79
P+G+ VIRG ++VL+
Sbjct: 54 --RTPIGMTVIRGNSIVLL 70
>gi|417407452|gb|JAA50336.1| Putative small nuclear ribonucleoprotein splicing factor, partial
[Desmodus rotundus]
Length = 72
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 35 GTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRGENVVLIGELDLERD 87
GTL FDQ N +L+ + ERV + + LGLY++RG+NV +IGE+D E D
Sbjct: 1 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETD 54
>gi|367030948|ref|XP_003664757.1| hypothetical protein MYCTH_2119714 [Myceliophthora thermophila
ATCC 42464]
gi|347012028|gb|AEO59512.1| hypothetical protein MYCTH_2119714 [Myceliophthora thermophila
ATCC 42464]
Length = 83
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L RK++G L +D F N VL+ A E G+ + LG+ VI
Sbjct: 5 QPELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKDNGE---KVKLGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|342326346|gb|AEL23088.1| small nuclear ribonucleoprotein polypeptide G [Cherax
quadricarinatus]
Length = 77
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L Y+DK+++ L GR + GTL FD F N V++ E GD
Sbjct: 1 MSKAHPPE------LKKYMDKRVMTKLNGGRVVEGTLRGFDPFMNLVVDDGVEARKTGDR 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+ +G+ VIRG +++++ LD
Sbjct: 55 ---VRIGVVVIRGSSIIMLEALD 74
>gi|392568108|gb|EIW61282.1| like-Sm ribonucleo protein [Trametes versicolor FP-101664 SS1]
gi|395328913|gb|EJF61303.1| like-Sm ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
gi|449549694|gb|EMD40659.1| hypothetical protein CERSUDRAFT_111239 [Ceriporiopsis
subvermispora B]
Length = 77
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L ++DKKL V L+ GRK+ GTL +D F N V++ A E + P+G VIRG
Sbjct: 9 LKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDDALEETNPAQKH---PIGTVVIRGN 65
Query: 75 NVVLIGELDLER 86
+V + L+ R
Sbjct: 66 SVTSMETLEAIR 77
>gi|384251155|gb|EIE24633.1| hypothetical protein COCSUDRAFT_53022 [Coccomyxa subellipsoidea
C-169]
Length = 99
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPL--GLYV 70
LA +D + V+ DGR ++G L +DQ N +L+ ERV + + GL+V
Sbjct: 5 AGLAPLVDSTISVITNDGRVIVGILRGYDQATNLILDECHERVYSSKAGVEQVVLGGLHV 64
Query: 71 IRGENVVLIGELDLE 85
+RG+N+ ++GE+D E
Sbjct: 65 VRGDNIAVVGEVDDE 79
>gi|292656841|ref|YP_003536738.1| snRNP-like protein [Haloferax volcanii DS2]
gi|433417270|ref|ZP_20404659.1| snRNP-like protein [Haloferax sp. BAB2207]
gi|448290842|ref|ZP_21481987.1| snRNP-like protein [Haloferax volcanii DS2]
gi|448546215|ref|ZP_21626467.1| snRNP-like protein [Haloferax sp. ATCC BAA-646]
gi|448548214|ref|ZP_21627558.1| snRNP-like protein [Haloferax sp. ATCC BAA-645]
gi|448557401|ref|ZP_21632674.1| snRNP-like protein [Haloferax sp. ATCC BAA-644]
gi|448565365|ref|ZP_21636232.1| snRNP-like protein [Haloferax prahovense DSM 18310]
gi|448568277|ref|ZP_21637854.1| snRNP-like protein [Haloferax lucentense DSM 14919]
gi|448583315|ref|ZP_21646671.1| snRNP-like protein [Haloferax gibbonsii ATCC 33959]
gi|448600783|ref|ZP_21656162.1| snRNP-like protein [Haloferax alexandrinus JCM 10717]
gi|448606036|ref|ZP_21658615.1| snRNP-like protein [Haloferax sulfurifontis ATCC BAA-897]
gi|448622918|ref|ZP_21669567.1| snRNP-like protein [Haloferax denitrificans ATCC 35960]
gi|291371013|gb|ADE03240.1| snRNP homolog [Haloferax volcanii DS2]
gi|432200109|gb|ELK56223.1| snRNP-like protein [Haloferax sp. BAB2207]
gi|445577895|gb|ELY32315.1| snRNP-like protein [Haloferax volcanii DS2]
gi|445703058|gb|ELZ54994.1| snRNP-like protein [Haloferax sp. ATCC BAA-646]
gi|445714296|gb|ELZ66060.1| snRNP-like protein [Haloferax sp. ATCC BAA-644]
gi|445714916|gb|ELZ66674.1| snRNP-like protein [Haloferax sp. ATCC BAA-645]
gi|445715109|gb|ELZ66865.1| snRNP-like protein [Haloferax prahovense DSM 18310]
gi|445727227|gb|ELZ78841.1| snRNP-like protein [Haloferax lucentense DSM 14919]
gi|445729544|gb|ELZ81139.1| snRNP-like protein [Haloferax gibbonsii ATCC 33959]
gi|445734796|gb|ELZ86352.1| snRNP-like protein [Haloferax alexandrinus JCM 10717]
gi|445739453|gb|ELZ90960.1| snRNP-like protein [Haloferax sulfurifontis ATCC BAA-897]
gi|445753426|gb|EMA04843.1| snRNP-like protein [Haloferax denitrificans ATCC 35960]
Length = 76
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGAC-ERVIVGDLYCDIPLGLYVIRG 73
L + LD+ + VLL+DG G L +DQ N VLE A E + GD+ + +IRG
Sbjct: 9 LEASLDEPVTVLLKDGNAYFGVLAGYDQHMNVVLEEALDEDTVPGDIELEQVQDTTIIRG 68
Query: 74 ENVVLI 79
+NVV I
Sbjct: 69 DNVVTI 74
>gi|388492630|gb|AFK34381.1| unknown [Lotus japonicus]
Length = 80
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+DK L + L R ++GTL +DQF N V++ E + G+
Sbjct: 1 MSRSGQPPD------LKKYMDKNLQIKLNANRMIVGTLRGYDQFMNMVVDNTVE--VNGN 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
DI G+ VIRG +VV + L+
Sbjct: 53 EKNDI--GMVVIRGNSVVTVEALE 74
>gi|116182940|ref|XP_001221319.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88186395|gb|EAQ93863.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 83
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L RK++G L +D F N VL+ A E G+ + LG+ VI
Sbjct: 5 QPELKKYLDKRLFVQLNGSRKVLGVLRGYDVFLNIVLDDAVEEKDNGE---KVKLGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|390336863|ref|XP_001199475.2| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Strongylocentrotus purpuratus]
Length = 90
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 50/83 (60%), Gaps = 8/83 (9%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
++++L SY++ + V+ DGR+++GTL FDQ N +L+ + ERV Y + V
Sbjct: 1 MASTLESYVNHTVSVITNDGRQIVGTLKGFDQTINLILDESHERV-----YSNTAEVEQV 55
Query: 71 IRGENVVLIGELDLERD---ELP 90
++ ++ +IGE+D + D +LP
Sbjct: 56 VQVDSRAVIGEVDDDVDTGLDLP 78
>gi|308163178|gb|EFO65538.1| Hypothetical protein GLP15_5215 [Giardia lamblia P15]
Length = 107
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 21 KKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENV 76
+ +LV+ G + GTL +D F N +L+ +R+ G Y DIP+G ++RG+++
Sbjct: 21 RPVLVVTAAGPQYFGTLTHYDGFGNVLLKDTAQRITNGTSYADIPMGWVLVRGDDI 76
>gi|340520043|gb|EGR50280.1| predicted protein [Trichoderma reesei QM6a]
gi|358387525|gb|EHK25119.1| hypothetical protein TRIVIDRAFT_32934 [Trichoderma virens Gv29-8]
Length = 83
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L RK++G L +D F N VL+ A E G+ I LG+ VI
Sbjct: 5 QPELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKDGGE---KIRLGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|193713710|ref|XP_001949387.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Acyrthosiphon pisum]
Length = 79
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P L YLDKKL + L R++ G L FD F N VL+ E++ G +
Sbjct: 1 MSKAHP------PELKRYLDKKLSLKLNANRQVAGVLRGFDPFMNLVLDETVEKIKDGVV 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG++V+ I LD
Sbjct: 55 NS---IGMVVIRGDSVLTIEALD 74
>gi|402861349|ref|XP_003895059.1| PREDICTED: small nuclear ribonucleoprotein G-like [Papio anubis]
Length = 76
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR++ G L FD F N V++ E I G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRRVQGILQGFDPFMNLVIDECVEMAISGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG N++++ L+
Sbjct: 55 NN---IGMVVIRGNNIIMLEALE 74
>gi|154300461|ref|XP_001550646.1| hypothetical protein BC1G_11054 [Botryotinia fuckeliana B05.10]
gi|347828363|emb|CCD44060.1| similar to small nuclear ribonucleoprotein g [Botryotinia
fuckeliana]
Length = 85
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L RK++G L +D F N VL+ A E G+ + +G+ VI
Sbjct: 5 QPELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKEGGE---KVKIGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|310798750|gb|EFQ33643.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 84
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L RK++G L +D F N VL+ A E G+ + LG+ VI
Sbjct: 5 QPELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKEGGE---KVRLGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|388580917|gb|EIM21228.1| hypothetical protein WALSEDRAFT_7029, partial [Wallemia sebi CBS
633.66]
Length = 80
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 22 KLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRGENVVLIG 80
KLL++ DGR L+G L +D +N +L + ERV D + LGLY+I+G+N+V
Sbjct: 1 KLLLITTDGRCLIGHLQGYDNNSNIILSQSFERVFSSDQGVQTVDLGLYLIKGDNLVCAS 60
Query: 81 ELDLERDE 88
E+D D+
Sbjct: 61 EIDTTIDD 68
>gi|291244885|ref|XP_002742321.1| PREDICTED: small nuclear ribonucleoprotein polypeptide G-like
[Saccoglossus kowalevskii]
Length = 77
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR++ G L +D F N V++ + E + G+
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRQVTGVLRGYDPFMNLVMDESVEEISGGEK 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+ +G+ VIRG +++++ LD
Sbjct: 55 HQ---IGMVVIRGNSIIMLEALD 74
>gi|352683089|ref|YP_004893613.1| putative snRNP Sm-like protein [Thermoproteus tenax Kra 1]
gi|350275888|emb|CCC82535.1| putative snRNP Sm-like protein [Thermoproteus tenax Kra 1]
Length = 79
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
L +L + K++LV LRDG ++ G L SFDQ N +LE A E V+ +++ G V
Sbjct: 12 LGATLQDSIGKRVLVKLRDGYEIRGILKSFDQHVNLLLEDA-EEVVDNNIF---KRGTMV 67
Query: 71 IRGENVVLI 79
+RGENV+ +
Sbjct: 68 VRGENVLFV 76
>gi|323448261|gb|EGB04162.1| hypothetical protein AURANDRAFT_32975 [Aureococcus
anophagefferens]
Length = 77
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 4 AGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD 63
+GPD L Y+DK L + + R++ G L +DQF N VLE A E G
Sbjct: 5 SGPD-------LKKYMDKALTIKMNGNRRVSGVLRGYDQFLNLVLEDATED---GSDGAK 54
Query: 64 IPLGLYVIRGENVVLIGELD 83
P+G+ V+RG ++ + L+
Sbjct: 55 TPIGMVVLRGNGIIQLQSLE 74
>gi|258597306|ref|XP_001347926.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|254832654|gb|AAN35839.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 147
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV--GDLYCDIPLGLYV 70
+S +D + + RD + +G L ++DQ N L E++IV + + D+ +G +
Sbjct: 11 SSFEEEIDTYIFISSRDNKLYLGILRTYDQHGNVFLTHCVEKIIVPEKNYFSDVYVGNLI 70
Query: 71 IRGENVVLIGELDLER 86
IRG+N+ G +D E+
Sbjct: 71 IRGDNIAYFGSVDEEK 86
>gi|126460744|ref|YP_001057022.1| LSM family small nuclear ribonucleoprotein [Pyrobaculum
calidifontis JCM 11548]
gi|126250465|gb|ABO09556.1| Small nuclear ribonucleoprotein, LSM family [Pyrobaculum
calidifontis JCM 11548]
Length = 80
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
L +L + K++LV LRD ++ G L +FDQ N +L+ A E +I G++Y G V
Sbjct: 12 LGATLQDSIGKQVLVKLRDSHEIRGILKAFDQHVNLLLDDA-EEIIDGNVY---KRGTIV 67
Query: 71 IRGENVVLI 79
+RGENV+ I
Sbjct: 68 VRGENVLFI 76
>gi|296424977|ref|XP_002842020.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638277|emb|CAZ86211.1| unnamed protein product [Tuber melanosporum]
Length = 99
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG----DLYCDIPLGL 68
++L ++++K + ++ DGR L G L DQ N +L ER+ + + GL
Sbjct: 2 SNLQTFVNKTVTIITSDGRTLTGKLMGHDQTTNLILSRTIERIFATPGSEEATQQVEHGL 61
Query: 69 YVIRGENVVLIGELD 83
Y+IRG+NV + G +D
Sbjct: 62 YLIRGDNVAICGLVD 76
>gi|336373417|gb|EGO01755.1| hypothetical protein SERLA73DRAFT_177234 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386246|gb|EGO27392.1| hypothetical protein SERLADRAFT_460722 [Serpula lacrymans var.
lacrymans S7.9]
Length = 77
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L ++DKKL V L+ GR++ GTL +D F N V++ A E + P+G VIRG
Sbjct: 9 LKKFMDKKLFVHLQGGRRVSGTLRGYDLFLNLVIDDALEETTPAQKH---PIGTVVIRGN 65
Query: 75 NVV 77
+V
Sbjct: 66 SVT 68
>gi|429853426|gb|ELA28500.1| small nuclear ribonucleoprotein [Colletotrichum gloeosporioides
Nara gc5]
Length = 104
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 10/82 (12%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
M+ A P+ L YLDK+L V L RK++G L +D F N VL+ A E G+
Sbjct: 1 MAPAQPE-------LKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKEGGE- 52
Query: 61 YCDIPLGLYVIRGENVVLIGEL 82
+ LG+ VIRG +VV EL
Sbjct: 53 --KVRLGMVVIRGNSVVRGREL 72
>gi|340897533|gb|EGS17123.1| putative small nuclear ribonucleoprotein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 82
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L R+++G L +D F N VL+ A E G+ + LG+ I
Sbjct: 5 QPELKKYLDKRLFVELNGSRRVIGVLRGYDVFLNIVLDDAVEERPNGE---KVKLGMVTI 61
Query: 72 RGENVVLIGELDLERDELP 90
RG +VV++ L+ D+ P
Sbjct: 62 RGNSVVILEPLERIGDDRP 80
>gi|323454589|gb|EGB10459.1| hypothetical protein AURANDRAFT_23509 [Aureococcus
anophagefferens]
Length = 107
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLY 69
++T+L + K++ V+ DGR ++G L +DQ N +L+ ERV D + + LGLY
Sbjct: 1 MATALKEMMGKQISVITCDGRNIVGQLRGYDQVTNVILDECHERVFSLDAGVEQVVLGLY 60
Query: 70 VI----------RGENVVLIGELDLERD 87
+I R +N+ +IGE+D+E D
Sbjct: 61 IIRGAPRRARIRRRDNIAVIGEVDIELD 88
>gi|167392087|ref|XP_001740010.1| lsm1 [Entamoeba dispar SAW760]
gi|165896050|gb|EDR23590.1| lsm1, putative [Entamoeba dispar SAW760]
Length = 94
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
+ Y++KK+ V+ G+ +G L +D N VL+ + ER + +I GL ++RG+
Sbjct: 4 VKEYINKKVEVITTLGKVYIGILTGYDNPMNIVLKNSVERTFSKEGVSNISCGLLILRGD 63
Query: 75 NVVLIGELDLERDE 88
+++IG L+ E+D
Sbjct: 64 EIMVIGGLNEEKDN 77
>gi|169602875|ref|XP_001794859.1| hypothetical protein SNOG_04441 [Phaeosphaeria nodorum SN15]
gi|160706278|gb|EAT88201.2| hypothetical protein SNOG_04441 [Phaeosphaeria nodorum SN15]
Length = 84
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YL+K++LV L RK+MG L +D + N VL+ A E G+ +G+ VI
Sbjct: 5 QPELKKYLEKRVLVQLNGSRKVMGILRGYDVYLNIVLDEALEEKAGGE---KTRIGMVVI 61
Query: 72 RGENVVLIGELDLERDELP 90
RG VV++ LD ++P
Sbjct: 62 RGNAVVMLEALDRINQDVP 80
>gi|109048997|ref|XP_001112504.1| PREDICTED: small nuclear ribonucleoprotein G-like [Macaca
mulatta]
Length = 76
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S L ++DKKL + L GR + G L FD F N V++ E I G +G+ VI
Sbjct: 6 SPELKKFMDKKLSLKLNGGRHVQGILQGFDPFMNLVIDECVEMAISGQQNN---IGMVVI 62
Query: 72 RGENVVLIGELD 83
RG N++++ L+
Sbjct: 63 RGNNIIMLEALE 74
>gi|389848158|ref|YP_006350397.1| small nuclear ribonucleoprotein (snRNP)-like protein [Haloferax
mediterranei ATCC 33500]
gi|448618366|ref|ZP_21666603.1| small nuclear ribonucleoprotein (snRNP)-like protein [Haloferax
mediterranei ATCC 33500]
gi|388245464|gb|AFK20410.1| small nuclear ribonucleoprotein (snRNP)-like protein [Haloferax
mediterranei ATCC 33500]
gi|445746737|gb|ELZ98195.1| small nuclear ribonucleoprotein (snRNP)-like protein [Haloferax
mediterranei ATCC 33500]
Length = 76
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGAC-ERVIVGDLYCDIPLGLYVIRG 73
L + LD+ + VLL+DG G L +DQ N VLE A E + GD+ + +IRG
Sbjct: 9 LEASLDEPVTVLLKDGNAYFGVLAGYDQHMNVVLEEALDEDSVPGDIELEQVQDTTIIRG 68
Query: 74 ENVVLI 79
+NVV I
Sbjct: 69 DNVVTI 74
>gi|351700996|gb|EHB03915.1| U6 snRNA-associated Sm-like protein LSm8 [Heterocephalus glaber]
Length = 123
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 33 LMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRGENVVLIGELDLERD 87
++GT FDQ N +L+ + ERV + + LGLY++RG+NV +IGE+D E D
Sbjct: 3 VVGTFKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETD 58
>gi|346971880|gb|EGY15332.1| hypothetical protein VDAG_06186 [Verticillium dahliae VdLs.17]
Length = 85
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L RK++G L +D F N VL+ A E G+ + +G+ VI
Sbjct: 5 QPELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKEGGE---KVRIGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|156040265|ref|XP_001587119.1| hypothetical protein SS1G_12149 [Sclerotinia sclerotiorum 1980]
gi|154696205|gb|EDN95943.1| hypothetical protein SS1G_12149 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 84
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L RK++G L +D F N VL+ A E G+ + +G+ VI
Sbjct: 5 QPELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKEGGE---KVKIGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|398397857|ref|XP_003852386.1| hypothetical protein MYCGRDRAFT_104681 [Zymoseptoria tritici
IPO323]
gi|339472267|gb|EGP87362.1| hypothetical protein MYCGRDRAFT_104681 [Zymoseptoria tritici
IPO323]
Length = 93
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
M A P+ L YLDK++ V L RK+MGTL +D F N VL+ A E +
Sbjct: 1 MPQAQPE-------LKKYLDKRVEVQLNGSRKVMGTLRGYDVFLNIVLDEATESKPNAE- 52
Query: 61 YCDIPLGLYVIRGENVVLI 79
+ LG+ VIRG +VV++
Sbjct: 53 --KVRLGMCVIRGNSVVMM 69
>gi|361126108|gb|EHK98124.1| putative small nuclear ribonucleoprotein G [Glarea lozoyensis
74030]
Length = 85
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L RK++G L +D F N VL+ A E G+ + LG+ VI
Sbjct: 5 QPELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKDGGE---KVRLGMVVI 61
Query: 72 RGENVVLI 79
RG +VV++
Sbjct: 62 RGNSVVML 69
>gi|449481049|ref|XP_004177249.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Taeniopygia guttata]
Length = 132
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 35 GTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRGENVVLIGELDLERD 87
GTL FDQ N +L+ + ERV + + LGLY++RG+NV +IGE+D E D
Sbjct: 61 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETD 114
>gi|320591988|gb|EFX04427.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 86
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L RK++G L +D F N VL+ A E G+ + +G+ VI
Sbjct: 5 QPELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKDGGE---KVKIGMVVI 61
Query: 72 RGENVVLIGELD 83
RG ++V++ L+
Sbjct: 62 RGNSIVMLEALE 73
>gi|256089000|ref|XP_002580607.1| lsm1 [Schistosoma mansoni]
gi|353231362|emb|CCD77780.1| putative lsm1, partial [Schistosoma mansoni]
Length = 72
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 35 GTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRGENVVLIGELDLERD 87
GTL FD N V++ + ERV + +PLGL++IRG+NV ++GELD + D
Sbjct: 1 GTLKGFDNVVNLVIKDSHERVFSPTEGVEQVPLGLFIIRGQNVAVVGELDEDLD 54
>gi|348671498|gb|EGZ11319.1| hypothetical protein PHYSODRAFT_519698 [Phytophthora sojae]
Length = 88
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 21 KKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLYVIRGENVVLI 79
+ + V+ DGR ++G L FDQ N +L+ + ERV + + + LGLY++RG+N+ +I
Sbjct: 3 ETISVITNDGRNIIGVLKGFDQCVNVILDDSFERVFSLKEPVEAVELGLYIVRGDNISVI 62
Query: 80 G 80
G
Sbjct: 63 G 63
>gi|406865394|gb|EKD18436.1| LSM domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 83
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L RK++G L +D F N VL+ A E G+ + LG+ VI
Sbjct: 5 QPELKKYLDKRLFVQLNGTRKVIGILRGYDVFLNIVLDDAVEEKDGGE---KVRLGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|448611893|ref|ZP_21662323.1| small nuclear ribonucleoprotein (snRNP)-like protein [Haloferax
mucosum ATCC BAA-1512]
gi|445742654|gb|ELZ94148.1| small nuclear ribonucleoprotein (snRNP)-like protein [Haloferax
mucosum ATCC BAA-1512]
Length = 76
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGAC-ERVIVGDLYCDIPLGLYVIRG 73
L + LD+ + VLL+DG G L +DQ N VLE A E + GD+ + +IRG
Sbjct: 9 LEASLDEPVTVLLKDGNAYYGVLAGYDQHMNVVLEEALDEDAVPGDIDLEQVEDTTIIRG 68
Query: 74 ENVVLI 79
+NVV I
Sbjct: 69 DNVVTI 74
>gi|159473465|ref|XP_001694854.1| Sm protein [Chlamydomonas reinhardtii]
gi|158276233|gb|EDP02006.1| Sm protein [Chlamydomonas reinhardtii]
Length = 100
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI--PLGLYV 70
T L + ++ V+ DG+ +G L +DQ N +L+ ERV + G+Y
Sbjct: 6 TKLTDLVGSQVTVITNDGKHYVGVLRGYDQTWNLLLQECQERVYSAKSGVQVIQNPGIYC 65
Query: 71 IRGENVVLIGELDLERD 87
IRG+NV ++GE+D E D
Sbjct: 66 IRGDNVAIVGEVDEEAD 82
>gi|345778417|ref|XP_003431727.1| PREDICTED: uncharacterized protein LOC100682645 [Canis lupus
familiaris]
Length = 181
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L ++DKKL + L DGR + G L FD F N V++ E G +G+ VIRG
Sbjct: 114 LKKFMDKKLSLKLNDGRHVQGILQGFDPFMNLVIDECVEMATSGQQN---NIGMVVIRGN 170
Query: 75 NVVLIGELD 83
N++++ L+
Sbjct: 171 NIIMLEGLE 179
>gi|299740998|ref|XP_001834148.2| hypothetical protein CC1G_09105 [Coprinopsis cinerea
okayama7#130]
gi|298404507|gb|EAU87644.2| hypothetical protein CC1G_09105 [Coprinopsis cinerea
okayama7#130]
Length = 107
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L+ Y+++K+ V GR+++G L +DQ N VL+ E V + Y LGL V+RG
Sbjct: 26 LSKYVNEKIRVKFTGGREVIGVLKGYDQLLNLVLDEVEEEVSASNPYKKRSLGLVVLRGP 85
Query: 75 NVVLIGELD 83
+ L+ +D
Sbjct: 86 TITLLSPVD 94
>gi|400602043|gb|EJP69668.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 83
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L RK++G L +D F N VL+ A E G+ LG+ VI
Sbjct: 5 QPELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAFEETEGGN---KTRLGMVVI 61
Query: 72 RGENVVLI 79
RG +VV++
Sbjct: 62 RGNSVVML 69
>gi|448578387|ref|ZP_21643822.1| snRNP-like protein [Haloferax larsenii JCM 13917]
gi|448592536|ref|ZP_21651643.1| snRNP-like protein [Haloferax elongans ATCC BAA-1513]
gi|445726928|gb|ELZ78544.1| snRNP-like protein [Haloferax larsenii JCM 13917]
gi|445731541|gb|ELZ83125.1| snRNP-like protein [Haloferax elongans ATCC BAA-1513]
Length = 75
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L LD+ + V L+DG G L +DQ N VLE + + + GD+ + +IRG+
Sbjct: 9 LEESLDEPVTVTLKDGSAYYGVLAGYDQHMNVVLEESLDDTMPGDIELEQVEDTTIIRGD 68
Query: 75 NVVLI 79
NVV I
Sbjct: 69 NVVTI 73
>gi|119188491|ref|XP_001244852.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|320031840|gb|EFW13798.1| small nuclear ribonucleoprotein SmG [Coccidioides posadasii str.
Silveira]
gi|392867766|gb|EAS33463.2| small nuclear ribonucleoprotein SmG [Coccidioides immitis RS]
Length = 78
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L Y++K+LL+ + R+++G L +D F N VL+ A E G+ + LG+ VI
Sbjct: 5 QPELKKYMEKRLLIQINGNRRVIGVLRGYDVFMNIVLDEAIEEKTGGE---KVRLGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|367051545|ref|XP_003656151.1| hypothetical protein THITE_2120569 [Thielavia terrestris NRRL
8126]
gi|347003416|gb|AEO69815.1| hypothetical protein THITE_2120569 [Thielavia terrestris NRRL
8126]
Length = 83
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L RK++G L +D F N VL+ A E G+ LG+ VI
Sbjct: 5 QPELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKDNGE---KAKLGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|440640051|gb|ELR09970.1| small nuclear ribonucleoprotein G [Geomyces destructans 20631-21]
Length = 83
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L RK++G L +D F N VL+ A E G+ + +G+ VI
Sbjct: 5 QPELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKDGGE---KVRIGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|261198058|ref|XP_002625431.1| predicted protein [Ajellomyces dermatitidis SLH14081]
gi|239595394|gb|EEQ77975.1| predicted protein [Ajellomyces dermatitidis SLH14081]
gi|239607755|gb|EEQ84742.1| predicted protein [Ajellomyces dermatitidis ER-3]
gi|327354601|gb|EGE83458.1| small nuclear ribonucleoprotein SmG [Ajellomyces dermatitidis
ATCC 18188]
Length = 78
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L Y++K+L V L RK++G L +D F N VL+ A E G+ + LG+ VI
Sbjct: 5 QPELKKYMEKRLFVQLNGNRKVIGILRGYDVFMNIVLDEAVEEKNGGE---KVRLGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|407929252|gb|EKG22086.1| hypothetical protein MPH_00541 [Macrophomina phaseolina MS6]
Length = 81
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L RK++G L +D F N VL+ A E G+ + +G+ VI
Sbjct: 5 QPELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKAGGE---KVRIGMCVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|46107748|ref|XP_380933.1| hypothetical protein FG00757.1 [Gibberella zeae PH-1]
gi|408399451|gb|EKJ78553.1| hypothetical protein FPSE_01277 [Fusarium pseudograminearum
CS3096]
Length = 84
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L RK++G L +D F N VL+ A E G+ + +G+ VI
Sbjct: 5 QPELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKDNGE---KVRIGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|336271831|ref|XP_003350673.1| hypothetical protein SMAC_02344 [Sordaria macrospora k-hell]
gi|380094835|emb|CCC07337.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 155
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 60 LYCDIPLGLYVIRGENVVLIGELDLERDELPP 91
LY D+ GL+V+RGENV+L+GE+DL+RD+ P
Sbjct: 76 LYADVDRGLFVVRGENVLLMGEIDLDRDDDAP 107
>gi|389631277|ref|XP_003713291.1| sm snRNP core protein Smg1 [Magnaporthe oryzae 70-15]
gi|351645624|gb|EHA53484.1| sm snRNP core protein Smg1 [Magnaporthe oryzae 70-15]
gi|440466674|gb|ELQ35928.1| sm snRNP core protein Smg1 [Magnaporthe oryzae Y34]
gi|440476979|gb|ELQ58129.1| sm snRNP core protein Smg1 [Magnaporthe oryzae P131]
Length = 88
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDKK+ V L RK++G + +D F N VLE A E G+ + +G VI
Sbjct: 5 QPELKKYLDKKVFVQLNGSRKVVGVVRGYDVFLNIVLEDAFEEKDGGE---KVKIGTVVI 61
Query: 72 RGENVVLI 79
RG +VV++
Sbjct: 62 RGNSVVML 69
>gi|257076617|ref|ZP_05570978.1| snRNP Sm-like protein [Ferroplasma acidarmanus fer1]
Length = 71
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L L+KK+ +LL+D R L+GTL +D++ N L+ A E G++ I G +IRG
Sbjct: 9 LEENLNKKVTLLLKDNRSLVGTLVGYDEYMNMTLDDAEEN---GEVQRKI--GKVIIRGS 63
Query: 75 NVVLI 79
NVV I
Sbjct: 64 NVVRI 68
>gi|346322383|gb|EGX91982.1| small nuclear ribonucleoprotein Lsm8, putative [Cordyceps militaris
CM01]
Length = 128
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 10/75 (13%)
Query: 21 KKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP-------LGLYVIRG 73
+K+L++ D R L+GTL + D N VL A ER+I D P LG+Y++RG
Sbjct: 39 EKVLIVTADSRILVGTLTACDNSTNIVLTNAIERII---RTPDDPEPSAIDSLGVYIVRG 95
Query: 74 ENVVLIGELDLERDE 88
+NV IG +D + D+
Sbjct: 96 DNVCSIGLVDEQLDD 110
>gi|62083383|gb|AAX62416.1| small nuclear ribonucleoprotein G [Lysiphlebus testaceipes]
Length = 76
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P L Y+DKKL + L GR ++G L FD F N V++ + E G
Sbjct: 1 MSKAHP------PELKKYMDKKLSLKLNGGRHVIGILRGFDPFMNMVIDESVEECKDGSQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +V+++ LD
Sbjct: 55 NN---IGMVVIRGNSVIMLEALD 74
>gi|414867201|tpg|DAA45758.1| TPA: small nuclear ribonucleoprotein G [Zea mays]
Length = 67
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 19 LDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVL 78
+DKKL + + R ++GTL FDQF N V++ E + G+ DI G+ VIRG +VV+
Sbjct: 1 MDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVE--VNGNDKTDI--GMVVIRGNSVVM 56
Query: 79 IGELD 83
I L+
Sbjct: 57 IEALE 61
>gi|294888449|ref|XP_002772471.1| lsm1, putative [Perkinsus marinus ATCC 50983]
gi|294896670|ref|XP_002775673.1| lsm1, putative [Perkinsus marinus ATCC 50983]
gi|239876697|gb|EER04287.1| lsm1, putative [Perkinsus marinus ATCC 50983]
gi|239881896|gb|EER07489.1| lsm1, putative [Perkinsus marinus ATCC 50983]
Length = 113
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP------ 65
S+ L L+ ++L++ DG+ L+G FDQ N VL ERV Y +
Sbjct: 19 SSMLEPMLNTEVLLVTADGKVLLGKFNGFDQSLNVVLSECKERV-----YSTVEGVETLH 73
Query: 66 LGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRV 104
GLY++RG++VV IGE+D + D T V A++K +
Sbjct: 74 HGLYLVRGDDVVSIGEVDEDIDARIDQST-VMAAQLKSI 111
>gi|85090916|ref|XP_958647.1| hypothetical protein NCU09880 [Neurospora crassa OR74A]
gi|336273960|ref|XP_003351734.1| hypothetical protein SMAC_00278 [Sordaria macrospora k-hell]
gi|28920025|gb|EAA29411.1| hypothetical protein NCU09880 [Neurospora crassa OR74A]
gi|336463997|gb|EGO52237.1| hypothetical protein NEUTE1DRAFT_90311 [Neurospora tetrasperma
FGSC 2508]
gi|350296078|gb|EGZ77055.1| LSM-domain-containing protein [Neurospora tetrasperma FGSC 2509]
gi|380096013|emb|CCC06060.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 85
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L RK++G L +D F N VL+ A E G+ + LG+ I
Sbjct: 5 QPELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKDGGE---KVKLGMVTI 61
Query: 72 RGENVVLI 79
RG +VV++
Sbjct: 62 RGNSVVMM 69
>gi|302768987|ref|XP_002967913.1| hypothetical protein SELMODRAFT_227744 [Selaginella
moellendorffii]
gi|300164651|gb|EFJ31260.1| hypothetical protein SELMODRAFT_227744 [Selaginella
moellendorffii]
Length = 81
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
MS +G P D L Y+D KL++ L R ++G L FDQF N VL+ E I G+
Sbjct: 1 MSKSGQPPD------LKKYMDLKLMIKLNANRVVVGVLRGFDQFMNLVLDNTME--ISGN 52
Query: 60 LYCDIPLGLYVIRGENVVLIGELD 83
+I G+ VIRG +V +I L+
Sbjct: 53 ERTEI--GMVVIRGNSVAMIEALE 74
>gi|154283627|ref|XP_001542609.1| small nuclear ribonucleoprotein SmG [Ajellomyces capsulatus NAm1]
gi|150410789|gb|EDN06177.1| small nuclear ribonucleoprotein SmG [Ajellomyces capsulatus NAm1]
gi|225561938|gb|EEH10218.1| hypothetical protein HCBG_01863 [Ajellomyces capsulatus G186AR]
gi|240275552|gb|EER39066.1| hypothetical protein HCDG_07010 [Ajellomyces capsulatus H143]
gi|325091383|gb|EGC44693.1| hypothetical protein HCEG_03908 [Ajellomyces capsulatus H88]
Length = 78
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L Y++K+L V L RK++G L +D F N V++ A E G+ + LG+ VI
Sbjct: 5 QPELKKYMEKRLFVQLNGNRKVIGILRGYDVFMNIVMDEAVEEKSGGE---KVRLGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|429216595|ref|YP_007174585.1| small nuclear ribonucleoprotein [Caldisphaera lagunensis DSM
15908]
gi|429133124|gb|AFZ70136.1| small nuclear ribonucleoprotein [Caldisphaera lagunensis DSM
15908]
Length = 79
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
++A YL+ +LV ++ R++ G L S+DQ N +LE A E + G + PLGL ++RG
Sbjct: 14 AMADYLNSSVLVKMKGNREVKGILTSYDQHLNLILEKAEE--LEGKVSR--PLGLVLLRG 69
Query: 74 ENVVLI 79
+NV+ +
Sbjct: 70 DNVIAV 75
>gi|187610687|gb|ACD13592.1| small nuclear ribonucleoprotein polypeptide G [Penaeus monodon]
gi|408842889|gb|AFU93450.1| small nuclear ribonucleoprotein polypeptide G [Litopenaeus
vannamei]
Length = 77
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L Y+DK+++ L GR + GTL FD F N V++ E GD
Sbjct: 1 MSKAHPPE------LKKYMDKRVMTKLNGGRVVEGTLRGFDPFMNLVVDDGVEVRRSGDR 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+ +G VIRG +++++ LD
Sbjct: 55 ---VRVGFVVIRGSSIIMLEALD 74
>gi|378730773|gb|EHY57232.1| small nuclear ribonucleoprotein [Exophiala dermatitidis NIH/UT8656]
Length = 138
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE--RVIVGDLYCDIPLGLYVIR 72
L Y+DK++ V GR+++GTL +DQ N VL+ E R G+ PLGL V R
Sbjct: 54 LGKYVDKQITVKFNGGREIVGTLKGYDQLMNLVLDDVKETMRDDEGNETT-RPLGLVVAR 112
Query: 73 GENVVLIGELD 83
G +VLI LD
Sbjct: 113 GTLLVLISPLD 123
>gi|123445454|ref|XP_001311487.1| Sm protein [Trichomonas vaginalis G3]
gi|121893298|gb|EAX98557.1| Sm protein [Trichomonas vaginalis G3]
Length = 126
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 5 GPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD- 63
P++ + SL LD K+ V+ D + +G L SFDQF N +L A R + Y D
Sbjct: 30 NPEEYPGNMSLIFELDTKVCVITADDIEYVGELSSFDQFGNIILAKAVLRTFGPNGYDDE 89
Query: 64 IPLGLYVIRGENVVLIGELDLERD 87
LG IR + V+LIG++D +++
Sbjct: 90 EKLGTIFIRSDQVILIGKVDKDKE 113
>gi|225679289|gb|EEH17573.1| conserved hypothetical protein [Paracoccidioides brasiliensis
Pb03]
Length = 78
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L Y++K+L V + RK++G L +D F N VL+ A E G+ + LG+ VI
Sbjct: 5 QPELKKYMEKRLFVQINGNRKVIGILRGYDVFMNIVLDEAVEEKSGGE---KVRLGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|296421463|ref|XP_002840284.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636499|emb|CAZ84475.1| unnamed protein product [Tuber melanosporum]
Length = 76
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L RK++G L +D F N VL+ A E G+ + +G VI
Sbjct: 5 QPELKKYLDKRLFVQLNGSRKVIGILRGYDVFLNIVLDDAIEEKDGGE---KVRIGTVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|402083491|gb|EJT78509.1| sm snRNP core protein Smg1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 86
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDKK+ V L RK++G + +D F N VL+ A E G+ + LG+ VI
Sbjct: 5 QPELKKYLDKKVFVQLNGSRKVVGVVRGYDVFLNIVLDEAFEDKDGGE---KVKLGMVVI 61
Query: 72 RGENVVLI 79
RG +VV++
Sbjct: 62 RGNSVVML 69
>gi|295665420|ref|XP_002793261.1| small nuclear ribonucleoprotein SmG [Paracoccidioides sp.
'lutzii' Pb01]
gi|226278175|gb|EEH33741.1| small nuclear ribonucleoprotein SmG [Paracoccidioides sp.
'lutzii' Pb01]
Length = 78
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L Y++K+L V + RK++G L +D F N VL+ A E G+ + LG+ VI
Sbjct: 5 QPELKKYMEKRLFVQINGNRKVIGILRGYDVFMNIVLDEAVEEKSGGE---KVRLGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|66525153|ref|XP_625205.1| PREDICTED: probable small nuclear ribonucleoprotein G [Apis
mellifera]
gi|380016176|ref|XP_003692064.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Apis
florea]
Length = 76
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P L Y+DKKL + L GR ++G L FD F N V++ + E G
Sbjct: 1 MSKAHP------PELKKYMDKKLSLKLNGGRHVIGILRGFDPFMNMVIDESIEECKDG-- 52
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +V+++ LD
Sbjct: 53 -TKNNIGMVVIRGNSVIMLEALD 74
>gi|47201346|emb|CAF87885.1| unnamed protein product [Tetraodon nigroviridis]
Length = 139
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 45 NAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGEL 82
N V ER+ VG + DIP G++++RGENVVL+GE+
Sbjct: 1 NLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGEI 38
>gi|255945545|ref|XP_002563540.1| Pc20g10480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588275|emb|CAP86377.1| Pc20g10480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 88
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 1 MSWAGPDDVYLSTSLA---SYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV 57
M A P+ +S + Y++K++ L RK++G L +D F N VL+ A E
Sbjct: 1 MPQAQPELKKISADVVCFLQYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKEG 60
Query: 58 GDLYCDIPLGLYVIRGENVVLIGELD 83
G+ +P+G+ VIRG +VV++ L+
Sbjct: 61 GE---KVPIGMSVIRGNSVVMLEALE 83
>gi|340368632|ref|XP_003382855.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm7-like
[Amphimedon queenslandica]
Length = 108
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 44/100 (44%), Gaps = 24/100 (24%)
Query: 1 MSWAGPDD-----VYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERV 55
M+ + P D LS L YLDK++ V + GR+ G L +DQ N VL+GA E
Sbjct: 1 MAASAPPDKKRRETLLSAELGKYLDKRIRVKFQGGRETSGILKGYDQLLNLVLDGAIE-- 58
Query: 56 IVGDLYCDIP------------LGLYVIRGENVVLIGELD 83
Y P LGL V RG VVLI D
Sbjct: 59 -----YLQDPKDQFKLTDETRSLGLVVCRGTAVVLICPAD 93
>gi|361128364|gb|EHL00305.1| putative U6 snRNA-associated Sm-like protein LSm1 [Glarea
lozoyensis 74030]
Length = 235
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
Query: 45 NAVLEGACERVIVGDL------YCDIPLGLYVIRGENVVLIGELDLERDELPPH 92
N VL+ ER+ + Y D P G++++RGENV+L+GE+DL++D+ P
Sbjct: 135 NLVLQSTIERIFIPPTPSTPGYYADFPRGIFLVRGENVLLLGEIDLDKDDDVPE 188
>gi|344229634|gb|EGV61519.1| hypothetical protein CANTEDRAFT_124295 [Candida tenuis ATCC
10573]
Length = 98
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI----VGDLYCDIPLGL 68
+S +L KK+ V+ D R G L D N V+ ER+ D Y + +GL
Sbjct: 2 SSWKEFLYKKVRVITTDARLFEGKLEGIDNATNIVISNCIERIARVKGTDDKYQQLDMGL 61
Query: 69 YVIRGENVVLIGELD 83
Y++RG VV IGE+D
Sbjct: 62 YMLRGGTVVCIGEVD 76
>gi|357619057|gb|EHJ71789.1| small nuclear ribonucleoprotein G [Danaus plexippus]
Length = 76
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N VL+ + E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQR 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ LD
Sbjct: 55 NN---IGMVVIRGNSIIMLESLD 74
>gi|226291004|gb|EEH46432.1| small nuclear ribonucleoprotein SmG [Paracoccidioides
brasiliensis Pb18]
Length = 79
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L Y++K+L V + RK++G L +D F N VL+ A E G+ + LG+ VI
Sbjct: 5 QPELKKYMEKRLFVQINGNRKVIGILRGYDVFMNIVLDEAVEEKSGGE---KVRLGMVVI 61
Query: 72 RGENVVLI 79
RG +VV++
Sbjct: 62 RGNSVVML 69
>gi|195657879|gb|ACG48407.1| small nuclear ribonucleoprotein G [Zea mays]
Length = 67
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 19 LDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVL 78
+DKKL + + R ++GTL FDQF N V++ E + G+ DI G+ VIRG +VV+
Sbjct: 1 MDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNIVE--VNGNDKTDI--GMVVIRGNSVVM 56
Query: 79 IGELD 83
I L+
Sbjct: 57 IEALE 61
>gi|332018098|gb|EGI58712.1| Putative small nuclear ribonucleoprotein G [Acromyrmex
echinatior]
Length = 76
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P L Y+DK+L + L GR+++G L FD F N V++ + E G
Sbjct: 1 MSKAHP------PELKKYMDKRLSLKLNGGRRVVGILRGFDPFMNMVIDESIEECKDG-- 52
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +V+++ LD
Sbjct: 53 -TKNNIGMVVIRGNSVIMLEALD 74
>gi|327273127|ref|XP_003221332.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Anolis carolinensis]
Length = 89
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 25 VLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRGENV 76
V+ DGR ++GTL FDQ N +L+ + ERV + + LGLY++RG+NV
Sbjct: 29 VITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNV 81
>gi|448414146|ref|ZP_21577285.1| small nuclear ribonucleoprotein, lsm family [Halosarcina pallida
JCM 14848]
gi|445682439|gb|ELZ34856.1| small nuclear ribonucleoprotein, lsm family [Halosarcina pallida
JCM 14848]
Length = 77
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGAC--ERVIVGDLYCDIPLGLYVIR 72
L + L++ + V L+DG GTL +DQ N VLE E I+G++ +IR
Sbjct: 9 LEASLEETVTVNLKDGSSYHGTLAGYDQHMNVVLEAPADEEEAILGEIEVTPVEDTTIIR 68
Query: 73 GENVVLI 79
G+NVV I
Sbjct: 69 GDNVVTI 75
>gi|430813244|emb|CCJ29390.1| unnamed protein product [Pneumocystis jirovecii]
Length = 76
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L Y+DKK+ ++L RK++G L +D F N VL+ A E G+ C I G VI
Sbjct: 6 TPELKKYMDKKVFLMLNGSRKVIGVLRGYDVFLNIVLDEAFEEKEGGE-KCAI--GTVVI 62
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 63 RGNSVVMVEALE 74
>gi|327311460|ref|YP_004338357.1| Small nuclear ribonucleoprotein (snRNP) --like protein
[Thermoproteus uzoniensis 768-20]
gi|326947939|gb|AEA13045.1| Small nuclear ribonucleoprotein (snRNP) - like protein
[Thermoproteus uzoniensis 768-20]
Length = 75
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
L +L + K++LV LRDG ++ G L SFDQ N +LE A E ++ ++ + G V
Sbjct: 8 LGATLQDSIGKRVLVKLRDGYEIRGILKSFDQHVNLLLEDAEE--VIDNVI--LKRGTMV 63
Query: 71 IRGENVVLI 79
+RGENV+ +
Sbjct: 64 VRGENVLFV 72
>gi|301096191|ref|XP_002897193.1| hypothetical protein PITG_16975 [Phytophthora infestans T30-4]
gi|262107278|gb|EEY65330.1| hypothetical protein PITG_16975 [Phytophthora infestans T30-4]
Length = 93
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI-VGDLYCDIPLGLY 69
++ L +++ + V+ DGR ++G L FDQ N +L+ + ERV + + + LGLY
Sbjct: 22 MAAYLQEMMNQTISVITNDGRNIIGVLKGFDQCVNVILDDSFERVFSLKEPVEAVELGLY 81
Query: 70 VIRGENV 76
++RG+N+
Sbjct: 82 IVRGDNM 88
>gi|145353525|ref|XP_001421061.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581297|gb|ABO99354.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 72
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 19 LDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRGENVV 77
+DKKL + L R ++GTL FDQF N VL+ A D + P+G+ V+RG +VV
Sbjct: 1 MDKKLRLRLNGNRNVVGTLRGFDQFLNVVLDDATN-----DTTSEKTPMGMIVVRGNSVV 55
Query: 78 LIGELD 83
+ L+
Sbjct: 56 SMEALE 61
>gi|313125954|ref|YP_004036224.1| small nuclear ribonucleoprotein, lsm family [Halogeometricum
borinquense DSM 11551]
gi|448285794|ref|ZP_21477033.1| small nuclear ribonucleoprotein, lsm family [Halogeometricum
borinquense DSM 11551]
gi|312292319|gb|ADQ66779.1| Small nuclear ribonucleoprotein, LSM family [Halogeometricum
borinquense DSM 11551]
gi|445575824|gb|ELY30287.1| small nuclear ribonucleoprotein, lsm family [Halogeometricum
borinquense DSM 11551]
Length = 77
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGAC--ERVIVGDLYCDIPLGLYVIR 72
L + L++ + V L+DG GTL +DQ N VLE E I+G++ +IR
Sbjct: 9 LEASLEESVTVNLKDGSSYYGTLAGYDQHMNVVLEAPADEEEAILGEIEVTPVEDTTIIR 68
Query: 73 GENVVLI 79
G+NVV I
Sbjct: 69 GDNVVTI 75
>gi|307214549|gb|EFN89534.1| Probable small nuclear ribonucleoprotein G [Harpegnathos
saltator]
Length = 76
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L Y+DKKL + L GR + G L FD F N V++ E G
Sbjct: 1 MSKAHPPE------LKKYMDKKLSLKLNAGRHVTGILRGFDPFMNMVIDETVEECKDG-- 52
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +V+++ LD
Sbjct: 53 -TKNNIGMVVIRGNSVIMLEALD 74
>gi|392592906|gb|EIW82232.1| like-Sm ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 77
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L ++DKKL V L+ GRK+ G L +D F N V++ A E + P+G VIRG
Sbjct: 9 LKKFMDKKLFVHLQGGRKVSGILRGYDLFLNLVIDDALEESSPAQKH---PIGTVVIRGN 65
Query: 75 NVV 77
+V
Sbjct: 66 SVT 68
>gi|195134290|ref|XP_002011570.1| GI11102 [Drosophila mojavensis]
gi|195399181|ref|XP_002058199.1| GJ15956 [Drosophila virilis]
gi|193906693|gb|EDW05560.1| GI11102 [Drosophila mojavensis]
gi|194150623|gb|EDW66307.1| GJ15956 [Drosophila virilis]
Length = 76
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P L Y+DK++++ L GR + G L FD F N VL+ E
Sbjct: 1 MSKAHP------PELKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEEC---KD 51
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG ++V++ LD
Sbjct: 52 NTKNSIGMVVIRGNSIVMVEALD 74
>gi|308321244|gb|ADO27774.1| small nuclear ribonucleoprotein g [Ictalurus furcatus]
Length = 76
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N V++ + E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDSIEISAGGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
P+G+ VIRG +++++ L+
Sbjct: 55 N---PIGMVVIRGNSIIMLEALE 74
>gi|398411265|ref|XP_003856974.1| hypothetical protein MYCGRDRAFT_19618, partial [Zymoseptoria
tritici IPO323]
gi|339476859|gb|EGP91950.1| hypothetical protein MYCGRDRAFT_19618 [Zymoseptoria tritici
IPO323]
Length = 89
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 21 KKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI----VGDLYCDIPLGLYVIRGENV 76
+K+ +LL DGR L+G L + D N LE ER+I + + P GL+++RG+NV
Sbjct: 1 EKVCLLLTDGRCLIGDLIACDAVTNLALENCVERIIRSADEDEASEEEPRGLFMVRGDNV 60
Query: 77 VLIGELDLERD 87
VL G +D E D
Sbjct: 61 VLCGLVDEELD 71
>gi|294463208|gb|ADE77140.1| unknown [Picea sitchensis]
Length = 98
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-----PLGL 68
LA ++DK + V L GR++ GTL +DQ N VL+ A E + D PLGL
Sbjct: 10 DLAKFIDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFLRDQDDPLKTTDQTRPLGL 69
Query: 69 YVIRGENVVLIGELDLERDELP 90
V RG V+L+ D DE+P
Sbjct: 70 IVCRGTAVMLVAPTD-GTDEIP 90
>gi|195144580|ref|XP_002013274.1| GL24044 [Drosophila persimilis]
gi|198452776|ref|XP_002137534.1| GA26490 [Drosophila pseudoobscura pseudoobscura]
gi|194102217|gb|EDW24260.1| GL24044 [Drosophila persimilis]
gi|198132072|gb|EDY68092.1| GA26490 [Drosophila pseudoobscura pseudoobscura]
Length = 76
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P L Y+DK++++ L GR + G L FD F N VL+ E
Sbjct: 1 MSKAHP------PELKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTIEEC---KD 51
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG ++VL+ LD
Sbjct: 52 KTKNNVGMVVIRGNSIVLVEALD 74
>gi|340725441|ref|XP_003401078.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Bombus terrestris]
gi|350403951|ref|XP_003486961.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Bombus impatiens]
gi|307172241|gb|EFN63758.1| Probable small nuclear ribonucleoprotein G [Camponotus
floridanus]
Length = 76
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P L Y+DK+L + L GR ++G L FD F N V++ + E G
Sbjct: 1 MSKAHP------PELKKYMDKRLSLKLNGGRHVIGILRGFDPFMNMVIDESVEECKDG-- 52
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +V+++ LD
Sbjct: 53 -TKNNIGMVVIRGNSVIMLEALD 74
>gi|195042091|ref|XP_001991363.1| GH12097 [Drosophila grimshawi]
gi|193901121|gb|EDV99987.1| GH12097 [Drosophila grimshawi]
Length = 76
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P L Y+DK++++ L GR + G L FD F N VL+ E
Sbjct: 1 MSKAHP------PELKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTIEEC---KD 51
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG ++V++ LD
Sbjct: 52 NTKNSIGMVVIRGNSIVMVEALD 74
>gi|374327713|ref|YP_005085913.1| hypothetical protein P186_2269 [Pyrobaculum sp. 1860]
gi|356642982|gb|AET33661.1| hypothetical protein P186_2269 [Pyrobaculum sp. 1860]
Length = 57
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 23 LLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLI 79
+LV LRD ++ G L SFDQ N +LE A E +I G++Y G V+RGENV+ I
Sbjct: 1 MLVKLRDSHEIRGILRSFDQHVNLLLEDA-EEIIDGNVY---KRGTVVVRGENVLFI 53
>gi|194891288|ref|XP_001977464.1| GG18240 [Drosophila erecta]
gi|195479283|ref|XP_002100833.1| GE15956 [Drosophila yakuba]
gi|190649113|gb|EDV46391.1| GG18240 [Drosophila erecta]
gi|194188357|gb|EDX01941.1| GE15956 [Drosophila yakuba]
Length = 76
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P L Y+DK++++ L GR + G L FD F N VL+ E
Sbjct: 1 MSKAHP------PELKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEEC---KD 51
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG ++V++ LD
Sbjct: 52 NTKNNIGMVVIRGNSIVMVEALD 74
>gi|392580035|gb|EIW73162.1| hypothetical protein TREMEDRAFT_24108, partial [Tremella
mesenterica DSM 1558]
Length = 79
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
+LA+Y+DK + V R++ GTL FDQ N V++ E G LGL V+RG
Sbjct: 10 NLANYVDKSIRVKFMGAREVTGTLKGFDQLMNLVMDDVVEEFENG--MPSRSLGLVVLRG 67
Query: 74 ENVVLI 79
N+ LI
Sbjct: 68 PNITLI 73
>gi|389583785|dbj|GAB66519.1| LSM domain containing protein [Plasmodium cynomolgi strain B]
Length = 149
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 19 LDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD--LYCDIPLGLYVIRGENV 76
+D + + RD + +G L ++DQ N L E++IV D + D+ +G +IRG+N+
Sbjct: 17 IDTYIFISSRDNKLYLGILRTYDQHGNIFLTHCVEKIIVPDRNYFSDVYVGNLIIRGDNI 76
Query: 77 VLIGELDLER 86
G +D ++
Sbjct: 77 AYFGSVDEDK 86
>gi|18860007|ref|NP_573139.1| small ribonucleoprotein particle protein SmG, isoform A
[Drosophila melanogaster]
gi|221372123|ref|NP_001138209.1| small ribonucleoprotein particle protein SmG, isoform B
[Drosophila melanogaster]
gi|195351500|ref|XP_002042272.1| GM13382 [Drosophila sechellia]
gi|195567140|ref|XP_002107128.1| GD15738 [Drosophila simulans]
gi|29428065|sp|Q9VXE0.1|RUXG_DROME RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|7293253|gb|AAF48634.1| small ribonucleoprotein particle protein SmG, isoform A
[Drosophila melanogaster]
gi|17944563|gb|AAL48169.1| RH35475p [Drosophila melanogaster]
gi|194124115|gb|EDW46158.1| GM13382 [Drosophila sechellia]
gi|194204529|gb|EDX18105.1| GD15738 [Drosophila simulans]
gi|220901796|gb|ACL82939.1| small ribonucleoprotein particle protein SmG, isoform B
[Drosophila melanogaster]
gi|220952224|gb|ACL88655.1| SmG-PA [synthetic construct]
Length = 76
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P +V Y+DK++++ L GR + G L FD F N VL+ E
Sbjct: 1 MSKAHPPEV------KKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEEC---KD 51
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG ++V++ LD
Sbjct: 52 NTKNNIGMVVIRGNSIVMVEALD 74
>gi|196476795|gb|ACG76261.1| small nuclear ribonucleoprotein G [Amblyomma americanum]
Length = 77
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L Y+DKKL + L R + G L FD F N VL+ E G+
Sbjct: 1 MSKAHPPE------LKKYMDKKLSLRLNGSRVITGILRGFDPFMNLVLDETVEEAKGGEK 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+ +G+ V+RG ++VL+ D
Sbjct: 55 HN---IGMVVVRGNSIVLLESQD 74
>gi|406608168|emb|CCH40602.1| Small nuclear ribonucleoprotein-associated protein
[Wickerhamomyces ciferrii]
Length = 113
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP-LGLYV 70
S+ + +K+ V+ DG+ +G L FD N +L ERVI D I LGL V
Sbjct: 16 SSGFTNNFSEKVAVITTDGKYFVGILEGFDHLTNLILTETQERVIYQDEESIIEDLGLQV 75
Query: 71 IRGENVVLIGELDLERDE 88
IRG+ V +G +D E D+
Sbjct: 76 IRGDLVSCVGLVDEELDK 93
>gi|333449426|gb|AEF33399.1| small nuclear ribonucleoprotein polypeptide G protein
[Crassostrea ariakensis]
Length = 77
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L Y++KK+ + L GR++ G L FD F N V++ E +G+
Sbjct: 1 MSKAHPPE------LKKYMEKKINLKLNGGRQIQGILRGFDPFMNLVVDECIEETKLGER 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ V+RG +++L+ LD
Sbjct: 55 N---QIGMVVVRGNSIILLEALD 74
>gi|156098687|ref|XP_001615359.1| LSM domain containing protein [Plasmodium vivax Sal-1]
gi|148804233|gb|EDL45632.1| LSM domain containing protein [Plasmodium vivax]
Length = 256
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 9 VYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC--DIPL 66
++LST +D + + RD + +G L ++DQ N L E++IV D C D+ +
Sbjct: 115 LWLST-FEEDIDTYIFISSRDNKLYLGILRTYDQHGNIFLTHCVEKIIVPDRNCFSDVYV 173
Query: 67 GLYVIRGENVVLIGELDLER 86
G +IRG+N+ G +D ++
Sbjct: 174 GNLIIRGDNIAYFGSVDEDK 193
>gi|196009502|ref|XP_002114616.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190582678|gb|EDV22750.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 76
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L +++K+L + + R ++GTL FD F N VL+ E+V +
Sbjct: 1 MSKAHPPE------LKKFMEKRLSIKINGNRTVVGTLRGFDPFMNIVLDDTVEQVSSKE- 53
Query: 61 YCDIPLGLYVIRGENVVLI 79
+ LG+ VIRG +VV++
Sbjct: 54 --NNHLGMVVIRGNSVVMM 70
>gi|322800993|gb|EFZ21774.1| hypothetical protein SINV_00836 [Solenopsis invicta]
Length = 76
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L Y+DK+L + L GR ++G L FD F N V++ + E G
Sbjct: 1 MSKAHPPE------LKKYMDKRLSLKLNGGRTVIGILRGFDPFMNMVIDESIEECKDG-- 52
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +V+++ LD
Sbjct: 53 -TKNNIGMVVIRGNSVIMLEALD 74
>gi|119719338|ref|YP_919833.1| like-Sm ribonucleoprotein, core [Thermofilum pendens Hrk 5]
gi|119524458|gb|ABL77830.1| Like-Sm ribonucleoprotein, core [Thermofilum pendens Hrk 5]
Length = 73
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
LA L+K +LV L+ GR++ G L S+D N VLE A E I G LG ++RG+
Sbjct: 9 LAESLEKNVLVKLKGGREIRGQLKSYDYHLNLVLENAEE--IRGTRTRQ--LGTIIVRGD 64
Query: 75 NVVLI 79
NV+L+
Sbjct: 65 NVILV 69
>gi|383851818|ref|XP_003701428.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Megachile rotundata]
Length = 76
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P L Y+DK+L + L GR ++G L FD F N V++ + E G
Sbjct: 1 MSKAHP------PELKKYMDKRLSLKLNGGRHVVGILRGFDPFMNMVIDESIEECKDG-- 52
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +V+++ LD
Sbjct: 53 -TKNNIGMVVIRGNSVIMLEALD 74
>gi|194763519|ref|XP_001963880.1| GF21254 [Drosophila ananassae]
gi|190618805|gb|EDV34329.1| GF21254 [Drosophila ananassae]
Length = 101
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L Y+DK++++ L GR + G L FD F N VL+ E
Sbjct: 26 MSKAHPPE------LKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEEC---KD 76
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG ++V++ LD
Sbjct: 77 NTKNNIGMVVIRGNSIVMVEALD 99
>gi|209878201|ref|XP_002140542.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209556148|gb|EEA06193.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 98
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 25 VLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD--LYCDIPLGLYVIRGENVVLIGEL 82
VL DG+ +G+L +DQ N +L E+V + + I LGL++IRG+++ LIGE+
Sbjct: 15 VLTTDGKVYIGSLKGYDQLTNIILAKCREKVYEANSKVIKYIELGLFLIRGDSIALIGEI 74
Query: 83 DLE 85
+ E
Sbjct: 75 ESE 77
>gi|48477793|ref|YP_023499.1| snRNP Sm-like protein [Picrophilus torridus DSM 9790]
gi|48430441|gb|AAT43306.1| snRNP Sm-like protein [Picrophilus torridus DSM 9790]
Length = 71
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L L+KK+ +LL+D R L GTL +D++ N L+ A E G+ LG VIRG
Sbjct: 9 LEESLNKKVSLLLKDNRVLEGTLAGYDEYMNMTLDDAEES---GE--TQRKLGTVVIRGS 63
Query: 75 NVVLIG 80
NVV I
Sbjct: 64 NVVRIA 69
>gi|145329599|ref|NP_001077949.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|330252410|gb|AEC07504.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
Length = 67
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 19 LDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVL 78
+DKKL + L R + GTL FDQF N V++ E + G+ DI G+ VIRG ++V
Sbjct: 1 MDKKLQIKLNANRMVTGTLRGFDQFMNLVVDNTVE--VNGNDKTDI--GMVVIRGNSIVT 56
Query: 79 IGELD 83
+ L+
Sbjct: 57 VEALE 61
>gi|84998226|ref|XP_953834.1| hypothetical protein [Theileria annulata]
gi|65304831|emb|CAI73156.1| hypothetical protein, conserved [Theileria annulata]
Length = 161
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL--YCDIPLGLYVI 71
SL L + V LRD +G SFDQF N V+ A +++++ D + DI G VI
Sbjct: 16 SLEDELGSLIWVTLRDDTFYVGLFKSFDQFGNIVITDAVKKIVLNDKKSFSDIYCGYTVI 75
Query: 72 RGENVVLIGELDL 84
RGE++ LD+
Sbjct: 76 RGESISYFCALDV 88
>gi|427784695|gb|JAA57799.1| Putative small ribonucleoprotein particle protein smg
[Rhipicephalus pulchellus]
Length = 77
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L Y+DKKL + L R + G L FD F N VL+ E G+
Sbjct: 1 MSKAHPPE------LKKYMDKKLSLRLNGSRVVTGILRGFDPFMNLVLDETVEETKGGEK 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+ +G+ V+RG ++VL+ D
Sbjct: 55 HN---IGMVVVRGNSIVLLESQD 74
>gi|425781950|gb|EKV19884.1| Small nuclear ribonucleoprotein SmG, putative [Penicillium
digitatum PHI26]
Length = 85
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
M A P+ +S S Y++K++ L RK++G L +D F N VL+ A E G+
Sbjct: 1 MPQAQPELKKVSVSHLMYMEKRVFCQLNGNRKVIGVLRGYDVFMNIVLDEAFEEKDGGE- 59
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+ G+ VIRG ++V++ L+
Sbjct: 60 --KVSAGMVVIRGNSIVMLEALE 80
>gi|151940745|gb|EDN59132.1| Sm G [Saccharomyces cerevisiae YJM789]
gi|190406555|gb|EDV09822.1| small nuclear ribonucleoprotein G [Saccharomyces cerevisiae
RM11-1a]
gi|256268877|gb|EEU04227.1| Smx2p [Saccharomyces cerevisiae JAY291]
gi|349577899|dbj|GAA23066.1| K7_Smx2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299654|gb|EIW10747.1| Smx2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 77
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG-DLYCDIPLGLY- 69
+ L Y+DKK+L+ + RK+ G L +D F N VL+ A E I G D + PLGL
Sbjct: 4 TPELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAME--INGEDPANNHPLGLQT 61
Query: 70 VIRGENVVLIGELD 83
VIRG +++ + LD
Sbjct: 62 VIRGNSIISLEALD 75
>gi|156541626|ref|XP_001601035.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Nasonia vitripennis]
Length = 76
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P L ++DKKL + L GR ++G L FD F N V++ + E G
Sbjct: 1 MSKAHP------PELKKFMDKKLSLKLNGGRHVIGILRGFDPFMNMVIDESIEECKDGTK 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +V+++ LD
Sbjct: 55 NN---IGMVVIRGNSVIMLEALD 74
>gi|442754995|gb|JAA69657.1| Putative small nuclear ribonucleoprotein g [Ixodes ricinus]
Length = 77
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L Y+DKKL + L R + G L FD F N VL+ E G+
Sbjct: 1 MSKAHPPE------LKKYMDKKLSLRLNGSRVITGILRGFDPFMNLVLDETVEETKGGEK 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+ +G+ V+RG ++VL+ D
Sbjct: 55 HD---IGMVVVRGNSIVLLESQD 74
>gi|402590109|gb|EJW84040.1| hypothetical protein WUBG_05049 [Wuchereria bancrofti]
Length = 79
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
L Y+DK++ + L R + G L FD F N V+E A E + GD +G+ VIRG
Sbjct: 8 ELKKYMDKQVDLKLNGNRSVSGILRGFDPFMNIVVEDAVENLKSGDKNE---IGMVVIRG 64
Query: 74 ENVVLI 79
++V++
Sbjct: 65 NSIVIM 70
>gi|14192871|gb|AAK55776.1|AC079038_10 Putative small nuclear ribonucleoprotein G [Oryza sativa]
Length = 94
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 25/98 (25%)
Query: 1 MSWAG-PDDVYLSTSLASYLDKKLLVL--------------LRDGRKLMGTLCSFDQFAN 45
MS +G P D L Y+DKKL L L R ++GTL FDQF N
Sbjct: 1 MSRSGQPPD------LKKYMDKKLQTLMVYSFTLFSILPVKLNANRVVIGTLRGFDQFMN 54
Query: 46 AVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELD 83
V++ E + G+ DI G+ VIRG +VV+I L+
Sbjct: 55 LVVDNTVE--VNGNEKNDI--GMVVIRGNSVVMIEALE 88
>gi|159471089|ref|XP_001693689.1| small nuclear ribonucleoprotein polypeptide G [Chlamydomonas
reinhardtii]
gi|158283192|gb|EDP08943.1| small nuclear ribonucleoprotein polypeptide G [Chlamydomonas
reinhardtii]
Length = 77
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
L ++DKKL + L R + GTL FDQF N VL+ + L DI G+ VIRG
Sbjct: 8 ELKRFMDKKLSITLNANRHVSGTLRGFDQFMNLVLDATVDE----KLKVDI--GMVVIRG 61
Query: 74 ENVVLIGELD 83
++ I L+
Sbjct: 62 NSIQTIEALE 71
>gi|259146173|emb|CAY79432.1| Smx2p [Saccharomyces cerevisiae EC1118]
Length = 77
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG-DLYCDIPLGLY- 69
+ L Y+DKK+L+ + RK+ G L +D F N VL+ A E I G D + PLGL
Sbjct: 4 TPELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAME--INGEDPANNHPLGLQA 61
Query: 70 VIRGENVVLIGELD 83
VIRG +++ + LD
Sbjct: 62 VIRGNSIISLEALD 75
>gi|284413738|ref|NP_001165121.1| small nuclear ribonucleoprotein polypeptide G [Xenopus laevis]
gi|114107958|gb|AAI23340.1| MGC154809 protein [Xenopus laevis]
Length = 76
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + + GR++ G L FD F N VL+ + E G+
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKINGGRQVQGILRGFDPFMNLVLDESTEISGSGNQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 55 NS---IGMVVIRGNSIIMLEALE 74
>gi|195447608|ref|XP_002071290.1| GK25208 [Drosophila willistoni]
gi|194167375|gb|EDW82276.1| GK25208 [Drosophila willistoni]
Length = 76
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P L Y+DK++++ L GR + G L FD F N VL+ E
Sbjct: 1 MSKAHP------PELKKYMDKRMMLKLNGGRAVNGILRGFDPFMNVVLDDTIEEC---KD 51
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG ++V++ LD
Sbjct: 52 NTKNNIGMVVIRGNSIVMVEALD 74
>gi|448513188|ref|XP_003866888.1| Smx2 protein [Candida orthopsilosis Co 90-125]
gi|380351226|emb|CCG21450.1| Smx2 protein [Candida orthopsilosis Co 90-125]
Length = 90
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
L +YLDKK+ V L RK++G L +D F N + A E I G+ + +G+ VIRG
Sbjct: 7 ELKAYLDKKVSVQLNGSRKVIGILRGYDIFLNVTISDALEERIDGE---KLNIGITVIRG 63
Query: 74 ENVV 77
++V
Sbjct: 64 NSIV 67
>gi|91093719|ref|XP_967705.1| PREDICTED: similar to small nuclear ribonucleoprotein G
[Tribolium castaneum]
gi|270012988|gb|EFA09436.1| hypothetical protein TcasGA2_TC010648 [Tribolium castaneum]
Length = 76
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P L ++DKKL + L GR+++G L FD F N V++ + E G
Sbjct: 1 MSKAHP------PELKKFMDKKLCLKLNGGRQVVGILRGFDPFMNLVVDESVEECRDGKK 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG ++V++ LD
Sbjct: 55 NN---IGMVVIRGNSIVMLEALD 74
>gi|242018957|ref|XP_002429935.1| membrane-associated protein, putative [Pediculus humanus
corporis]
gi|212514981|gb|EEB17197.1| membrane-associated protein, putative [Pediculus humanus
corporis]
Length = 76
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR++ G L FD F N V++ + E +
Sbjct: 1 MSKAHPPE------LKKFMDKKLALKLNGGRQVNGILRGFDPFMNLVIDESVE-ICKNGT 53
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+ +I G+ VIRG +VV++ LD
Sbjct: 54 HNNI--GMVVIRGNSVVMLEALD 74
>gi|268834043|ref|NP_001161373.1| small nuclear ribonucleoprotein polypeptide G isoform 1 [Danio
rerio]
gi|268834149|ref|NP_001004660.2| small nuclear ribonucleoprotein polypeptide G isoform 2 [Danio
rerio]
Length = 76
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N V++ E G +
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDTIEMAPGGQM 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 55 NT---IGMVVIRGNSIIMLEALE 74
>gi|302831688|ref|XP_002947409.1| hypothetical protein VOLCADRAFT_87780 [Volvox carteri f.
nagariensis]
gi|300267273|gb|EFJ51457.1| hypothetical protein VOLCADRAFT_87780 [Volvox carteri f.
nagariensis]
Length = 74
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
L ++DKKL + L R + GTL FDQF N VL+ + L DI G+ VIRG
Sbjct: 8 ELKRFMDKKLSIHLNANRHVSGTLRGFDQFMNVVLDQTVDE----KLKVDI--GMVVIRG 61
Query: 74 ENVVLIGELD 83
++ I L+
Sbjct: 62 NSIQTIEALE 71
>gi|51858986|gb|AAH81512.1| Zgc:103688 [Danio rerio]
gi|182890240|gb|AAI65520.1| Zgc:103688 protein [Danio rerio]
Length = 76
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N V++ E G +
Sbjct: 1 MSEAHPPE------LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDTIEMAPGGQM 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 55 NT---IGMVVIRGNSIIMLEALE 74
>gi|321461226|gb|EFX72260.1| hypothetical protein DAPPUDRAFT_189031 [Daphnia pulex]
Length = 77
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L Y+DK++ + L GR ++G L FD F N V++ E V G
Sbjct: 1 MSKAHPPE------LKKYMDKRMSLKLNGGRNIVGILRGFDPFMNLVIDETVEEVKDGSK 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ V+RG +++++ L+
Sbjct: 55 NN---IGMVVVRGNSIIMLEALE 74
>gi|170576974|ref|XP_001893831.1| small nuclear ribonucleoprotein G [Brugia malayi]
gi|312077085|ref|XP_003141148.1| small nuclear ribonucleoprotein G [Loa loa]
gi|158599912|gb|EDP37330.1| small nuclear ribonucleoprotein G, putative [Brugia malayi]
gi|307763686|gb|EFO22920.1| small nuclear ribonucleoprotein G [Loa loa]
Length = 79
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
L Y+DK++ + L R + G L FD F N V+E A E + GD +G+ VIRG
Sbjct: 8 ELKKYMDKQVDLKLNGNRSVSGILRGFDPFMNIVVEDAVENLKNGDKNE---IGMVVIRG 64
Query: 74 ENVVLI 79
++V++
Sbjct: 65 NSIVIM 70
>gi|384244771|gb|EIE18269.1| small nuclear ribonucleo protein polypeptide G [Coccomyxa
subellipsoidea C-169]
Length = 73
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
L ++DKKL V L R++ G L FDQF N VL+ A D +G+ V+RG
Sbjct: 8 ELKKFMDKKLSVSLNANRQVTGVLRGFDQFMNIVLDNAV------DEKNKTDIGMVVVRG 61
Query: 74 ENVVLIGELD 83
+++ + L+
Sbjct: 62 NSIISLEALE 71
>gi|67468165|ref|XP_650141.1| small nuclear ribonucleo protein G [Entamoeba histolytica
HM-1:IMSS]
gi|56466712|gb|EAL44755.1| small nuclear ribonucleo protein G, putative [Entamoeba
histolytica HM-1:IMSS]
gi|407041678|gb|EKE40885.1| LSM domain containing protein [Entamoeba nuttalli P19]
gi|449707868|gb|EMD47446.1| small nuclear ribonucleo protein G, putative [Entamoeba
histolytica KU27]
Length = 81
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
L YL+K++LV + R ++G L +D++ N VL+ A + D IP+G+ +IRG
Sbjct: 7 ELKHYLEKRILVKIHGKRSIIGVLSGYDEYMNLVLDEAYD-ASNPDTDKHIPIGMIMIRG 65
Query: 74 ENVVLIGELD 83
+++ + +D
Sbjct: 66 NSILSVETID 75
>gi|308505206|ref|XP_003114786.1| CRE-SNR-7 protein [Caenorhabditis remanei]
gi|308258968|gb|EFP02921.1| CRE-SNR-7 protein [Caenorhabditis remanei]
Length = 77
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L Y+DK++ + L R++ G L FD F N V++ A E G I LG+ VIRG
Sbjct: 9 LKKYMDKEMDLKLNGNRQVSGILRGFDPFMNMVIDEAVEYPKSG---TPINLGMTVIRGN 65
Query: 75 NVVLI 79
+VV++
Sbjct: 66 SVVIM 70
>gi|281200600|gb|EFA74818.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 103
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 21 KKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENV 76
+++LVL DGR ++GTL DQ N +LE ER+ + LG+++I+G++V
Sbjct: 13 ERVLVLTADGRNIVGTLRGLDQMINVILEHCHERIYTDEGVEIFNLGVHIIKGDDV 68
>gi|118575248|ref|YP_874991.1| small nuclear ribonucleoprotein [Cenarchaeum symbiosum A]
gi|118193769|gb|ABK76687.1| small nuclear ribonucleoprotein [Cenarchaeum symbiosum A]
Length = 78
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L ++K +L+ L+ G+ + G L FDQ N +LE + E + G+ LG V+RG+
Sbjct: 10 LDESINKVVLIKLKGGKAIRGNLLGFDQHMNLLLESSEEIPVEGETRT---LGTIVVRGD 66
Query: 75 NVVLI 79
NVV+I
Sbjct: 67 NVVII 71
>gi|358385010|gb|EHK22607.1| hypothetical protein TRIVIDRAFT_60544 [Trichoderma virens Gv29-8]
Length = 132
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE--RVIVGDLYCDIPLGLYVIR 72
LA Y+DK++ V GR++ GTL +D N VL+ E R G+ PLGL V+R
Sbjct: 48 LAKYMDKEITVKFNGGREVRGTLKGYDALMNLVLDEVQETLRDEEGN-ESSRPLGLVVVR 106
Query: 73 GENVVLIGELD 83
G +VLI D
Sbjct: 107 GTLLVLISPAD 117
>gi|212541212|ref|XP_002150761.1| small nuclear ribonucleoprotein SmG, putative [Talaromyces
marneffei ATCC 18224]
gi|210068060|gb|EEA22152.1| small nuclear ribonucleoprotein SmG, putative [Talaromyces
marneffei ATCC 18224]
Length = 77
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L Y++K+L V L RK++G L +D F N VL+ A E G LG+ VI
Sbjct: 5 QPELKKYMEKRLFVQLNGNRKVIGILRGYDVFMNIVLDDAVEEKADG---GKDRLGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|448122563|ref|XP_004204478.1| Piso0_000329 [Millerozyma farinosa CBS 7064]
gi|448124870|ref|XP_004205036.1| Piso0_000329 [Millerozyma farinosa CBS 7064]
gi|358249669|emb|CCE72735.1| Piso0_000329 [Millerozyma farinosa CBS 7064]
gi|358350017|emb|CCE73296.1| Piso0_000329 [Millerozyma farinosa CBS 7064]
Length = 74
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L +YL+KK+ + L RK++GTL +D F N L A E G+ + +G VIRG
Sbjct: 7 LKNYLNKKISIQLNGTRKVIGTLRGYDIFLNVTLSEALEEQKDGN---KLDIGTVVIRGN 63
Query: 75 NVVLIGELD 83
+VV I L+
Sbjct: 64 SVVSIESLE 72
>gi|403170432|ref|XP_003329769.2| small nuclear ribonucleoprotein G [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375168717|gb|EFP85350.2| small nuclear ribonucleoprotein G [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 78
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L Y+DK+L + L+ RKL G L FD F N VL+ A E + G +GL VIRG
Sbjct: 9 LKKYMDKRLFLNLQGNRKLSGVLRGFDIFLNLVLDEAQEESLEGG--EKRKMGLIVIRGN 66
Query: 75 NVVLIGELDLER 86
+V I L+ R
Sbjct: 67 SVSSIETLEAVR 78
>gi|110668788|ref|YP_658599.1| small nuclear ribonucleoprotein (snRNP)-like protein
[Haloquadratum walsbyi DSM 16790]
gi|109626535|emb|CAJ52998.1| RNA-binding protein Lsm [Haloquadratum walsbyi DSM 16790]
Length = 77
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEG--ACERVIVGDLYCDIPLGLYVIR 72
L + LD + + L+DG GTL +DQ NAVL+ A E V G L +IR
Sbjct: 9 LEAALDDTVTITLKDGSAYHGTLAGYDQHMNAVLDPAMASETVDPGTLDVTEVEDTTIIR 68
Query: 73 GENVVLI 79
G+N+V I
Sbjct: 69 GDNIVTI 75
>gi|354546754|emb|CCE43486.1| hypothetical protein CPAR2_211300 [Candida parapsilosis]
Length = 73
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
L +YLDKK+ V L RK++G L +D F N + A E I G+ + +G+ VIRG
Sbjct: 7 ELKAYLDKKVSVQLNGSRKVIGILRGYDIFLNVTISDALEERIDGE---KLNIGITVIRG 63
Query: 74 ENVV 77
++V
Sbjct: 64 NSIV 67
>gi|324514246|gb|ADY45805.1| Small nuclear ribonucleoprotein G [Ascaris suum]
Length = 79
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
L Y+DK + + L R + G L FD F N V+E A E + G+ LG+ VIRG
Sbjct: 8 ELKKYMDKHMDLKLNGNRHVSGVLRGFDPFMNIVVEDAVEHLKNGESNT---LGMVVIRG 64
Query: 74 ENVVLI 79
++V++
Sbjct: 65 NSIVIM 70
>gi|346325864|gb|EGX95460.1| small nuclear ribonucleoprotein SmG [Cordyceps militaris CM01]
Length = 85
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L YLDK+L V L RK++G L +D F N VL+ A E G+ + + L VI
Sbjct: 5 QPELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAFEEREGGN-KAKLGMVLKVI 63
Query: 72 RGENVVLI 79
RG +VV++
Sbjct: 64 RGNSVVML 71
>gi|334183663|ref|NP_001185323.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
gi|332196294|gb|AEE34415.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
Length = 141
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 44/120 (36%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERV---------------- 55
+T L + +D+ + V+ DGR ++G L FDQ N +L+ + ERV
Sbjct: 4 TTGLETLVDQIISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKCHLFNRILRKLT 63
Query: 56 --------------IVGDLYCDIP--------------LGLYVIRGENVVLIGELDLERD 87
+ G + + LGLY+IRG+N+ +IGELD E D
Sbjct: 64 QIFKIGLVLQFFVCMSGHVDTSLDKCSWIFLEGVQQHVLGLYIIRGDNIGVIGELDEELD 123
>gi|255076665|ref|XP_002502006.1| predicted protein [Micromonas sp. RCC299]
gi|226517271|gb|ACO63264.1| predicted protein [Micromonas sp. RCC299]
Length = 81
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-PLGLYVIR 72
L Y+DKKL + L R ++G L FDQF N VL+ A D+ D PLG+ V+R
Sbjct: 7 ELKQYMDKKLRLKLNGNRGVVGVLRGFDQFLNLVLDEAHN-----DVGPDKEPLGMVVVR 61
Query: 73 GENV 76
G +V
Sbjct: 62 GNSV 65
>gi|209882130|ref|XP_002142502.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209558108|gb|EEA08153.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 140
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 12 STSLASYL-------DKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL-YCD 63
+TSL+S+L D ++ V+LRD R+ G SFDQ+ + LE E + Y
Sbjct: 18 ATSLSSWLLCLEEDLDSEIYVILRDSRQFKGIFRSFDQYGSLCLEAVYEIISNSKQEYTQ 77
Query: 64 IPLGLYVIRGENVVLIGELD 83
I LG + RG++++L G +D
Sbjct: 78 IYLGCMIFRGDSLMLCGLID 97
>gi|452845630|gb|EME47563.1| hypothetical protein DOTSEDRAFT_69495 [Dothistroma septosporum
NZE10]
Length = 133
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE--RVIVGDLYCDIPLGLYVI 71
LA Y+DK++ V GR++ GTL +DQ N VL+ E R G+ LGL V
Sbjct: 46 DLAKYMDKEISVKFNGGREVTGTLKGYDQLMNLVLDNVKELTRDDEGNTST-RNLGLLVA 104
Query: 72 RGENVVLIGELD 83
RG +VLI LD
Sbjct: 105 RGTLLVLISPLD 116
>gi|341882586|gb|EGT38521.1| hypothetical protein CAEBREN_25112 [Caenorhabditis brenneri]
gi|341895108|gb|EGT51043.1| hypothetical protein CAEBREN_10134 [Caenorhabditis brenneri]
Length = 77
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L Y+DK++ + L R + G L FD F N V++ A E G + LG+ VIRG
Sbjct: 9 LKKYMDKEMDLKLNGNRHVSGILRGFDPFMNMVIDEAVEYTKSG---ASVNLGMTVIRGN 65
Query: 75 NVVLI 79
+VV++
Sbjct: 66 SVVIM 70
>gi|242799446|ref|XP_002483380.1| small nuclear ribonucleoprotein SmG, putative [Talaromyces
stipitatus ATCC 10500]
gi|218716725|gb|EED16146.1| small nuclear ribonucleoprotein SmG, putative [Talaromyces
stipitatus ATCC 10500]
Length = 77
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L Y++K+L V L RK++G L +D F N VL+ A E G LG+ VI
Sbjct: 5 QPELKKYMEKRLFVQLNGNRKVIGILRGYDVFMNIVLDDAVEEKPDG---GKDRLGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|332376801|gb|AEE63540.1| unknown [Dendroctonus ponderosae]
Length = 76
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR++ G L FD F N V++ + E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLCLKLNGGRQVTGILRGFDPFMNLVVDESIEECRDGTK 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG ++V++ LD
Sbjct: 55 NN---IGMVVIRGNSIVMLEALD 74
>gi|328853199|gb|EGG02339.1| hypothetical protein MELLADRAFT_75479 [Melampsora larici-populina
98AG31]
Length = 78
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
L Y+DK+L + L+ RKL G L FD F N VL+ A E + G +GL VIRG
Sbjct: 8 ELKKYMDKRLFLNLQGNRKLSGVLRGFDIFLNLVLDEAQEENLEGG--EKRKMGLVVIRG 65
Query: 74 ENVVLIGELD 83
+V I L+
Sbjct: 66 NSVSSIETLE 75
>gi|295664210|ref|XP_002792657.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278771|gb|EEH34337.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 180
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG-DLYCDIPLGLYVIRG 73
LA Y++K++ V GR++ GTL +DQ N VL+ E + D PLGL V RG
Sbjct: 96 LAKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVKEVMRDDEDNQTTRPLGLVVARG 155
Query: 74 ENVVLIGELD 83
+VLI +D
Sbjct: 156 TLLVLISPVD 165
>gi|225677618|gb|EEH15902.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 179
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG-DLYCDIPLGLYVIRG 73
LA Y++K++ V GR++ GTL +DQ N VL+ E + D PLGL V RG
Sbjct: 95 LAKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVKEVMRDDEDNQTTRPLGLVVARG 154
Query: 74 ENVVLIGELD 83
+VLI +D
Sbjct: 155 TLLVLISPVD 164
>gi|401625929|gb|EJS43908.1| smx2p [Saccharomyces arboricola H-6]
Length = 77
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-PLGLY- 69
+ L Y+DKK+L+ + RK+ G L +D F N VL+ A E I G+ + PLGL
Sbjct: 4 TPELKKYMDKKILLNVNGSRKIAGILRGYDIFLNVVLDDAME--INGENAANNHPLGLQT 61
Query: 70 VIRGENVVLIGELD 83
VIRG +++ + LD
Sbjct: 62 VIRGNSIISLEALD 75
>gi|410077765|ref|XP_003956464.1| hypothetical protein KAFR_0C03370 [Kazachstania africana CBS
2517]
gi|372463048|emb|CCF57329.1| hypothetical protein KAFR_0C03370 [Kazachstania africana CBS
2517]
Length = 76
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLG-LYV 70
+ L Y+DKK+L+ + RK+ G L +D F N VL+ A E + +IPLG V
Sbjct: 4 TPELKKYMDKKVLLQINGSRKVAGILRGYDIFLNIVLDDAFE---LSKNDSNIPLGSQTV 60
Query: 71 IRGENVVLIGELD 83
IRG ++V + LD
Sbjct: 61 IRGNSIVAMEALD 73
>gi|156839006|ref|XP_001643199.1| hypothetical protein Kpol_1011p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113798|gb|EDO15341.1| hypothetical protein Kpol_1011p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 76
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLG-LYV 70
+ L Y++KK+L+ L RK+ G L +D F N V++ A E + +IPLG V
Sbjct: 4 TPELKKYMEKKVLLQLNGSRKVAGILRGYDIFLNVVIDDAIE---ISKDGTNIPLGSQTV 60
Query: 71 IRGENVVLIGELD 83
IRG +VV + LD
Sbjct: 61 IRGNSVVSLEALD 73
>gi|268565649|ref|XP_002639509.1| C. briggsae CBR-SNR-7 protein [Caenorhabditis briggsae]
Length = 77
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
L Y+DK++ + L R + G L FD F N V++ A E G+ I LG+ VIRG
Sbjct: 8 ELKKYMDKEIELKLNGNRHVSGILRGFDPFMNMVIDEAVEYPKNGN---SINLGMTVIRG 64
Query: 74 ENVVLI 79
+VV++
Sbjct: 65 NSVVIM 70
>gi|409043237|gb|EKM52720.1| hypothetical protein PHACADRAFT_261323 [Phanerochaete carnosa
HHB-10118-sp]
Length = 94
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
LA Y+++++ V GR++ G L FDQ N VL+ E++ L LGL V+RG
Sbjct: 11 DLAKYVNERIRVKFTGGREVTGVLKGFDQLLNLVLDDVEEQLHTEPLPSTRQLGLVVLRG 70
Query: 74 ENVVLIGELD 83
+ L+ +D
Sbjct: 71 PTLTLLSPVD 80
>gi|308810487|ref|XP_003082552.1| putative small nuclear ribonucleoprotein E (ISS) [Ostreococcus
tauri]
gi|116061021|emb|CAL56409.1| putative small nuclear ribonucleoprotein E (ISS) [Ostreococcus
tauri]
Length = 101
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 18 YLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVV 77
Y+DKKL + L R + G L FDQF N VL+ + P+G+ V+RG +VV
Sbjct: 30 YMDKKLRLRLNGNRSVTGILRGFDQFLNLVLDDSTNDTTT----EKTPMGMVVVRGNSVV 85
Query: 78 LIGELD 83
+ L+
Sbjct: 86 SMEALE 91
>gi|255732651|ref|XP_002551249.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131535|gb|EER31095.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 98
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 21 KKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-------DIPLGLYVIRG 73
+K+ V+ D R G L +D+ N +L ER+I +IPLG+Y++RG
Sbjct: 4 EKVHVITTDARFFEGILEGYDKSTNIILSNCIERIINSPEDEEEEEDNQEIPLGVYIMRG 63
Query: 74 ENVVLIGELDLE 85
VV IGE+ E
Sbjct: 64 NEVVCIGEISDE 75
>gi|378732523|gb|EHY58982.1| small nuclear ribonucleoprotein G [Exophiala dermatitidis
NIH/UT8656]
Length = 80
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L Y++K+L V L RK++G L +D F N VL+ A E G+ LG+ I
Sbjct: 5 QPELRKYMEKRLFVQLNGNRKVIGVLRGYDVFLNIVLDDAVEEKAGGERER---LGMVAI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|313222638|emb|CBY41662.1| unnamed protein product [Oikopleura dioica]
Length = 83
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 11/79 (13%)
Query: 24 LVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELD 83
L+ + + R ++G L DQ N VL ERV + LGLY+IRG+NV ++G +D
Sbjct: 1 LLQISNKRVVVGILKGLDQVVNVVLANTEERVFTPEGVDRQALGLYLIRGDNVAVVGAVD 60
Query: 84 -----------LERDELPP 91
++ +LPP
Sbjct: 61 ENTELGMDFSTIKAQQLPP 79
>gi|213513524|ref|NP_001134580.1| Small nuclear ribonucleoprotein G [Salmo salar]
gi|209734434|gb|ACI68086.1| Small nuclear ribonucleoprotein G [Salmo salar]
gi|303659717|gb|ADM15968.1| Small nuclear ribonucleoprotein G [Salmo salar]
Length = 76
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR++ G L FD F N V++ C + G +
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRQVQGVLRGFDPFMNLVMD-DCLEMAPGGI 53
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
I GL VIRG +++++ L+
Sbjct: 54 QNTI--GLVVIRGNSIIMLEALE 74
>gi|300123521|emb|CBK24793.2| unnamed protein product [Blastocystis hominis]
Length = 108
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-PLGLY 69
++ L ++KK+++L DGR G L DQ N +LE ER+ + +Y
Sbjct: 1 MAEELGKMMNKKVVILTNDGRTFTGMLRGVDQVTNLILEDVEERIFSQTEPMRVEKYDVY 60
Query: 70 VIRGENVVLIGELDLERD 87
+ RG++ LIG E+D
Sbjct: 61 LFRGDDTSLIGLYSEEKD 78
>gi|449463763|ref|XP_004149601.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
1 [Cucumis sativus]
gi|449463765|ref|XP_004149602.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
2 [Cucumis sativus]
gi|449530742|ref|XP_004172352.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
1 [Cucumis sativus]
gi|449530744|ref|XP_004172353.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
2 [Cucumis sativus]
Length = 99
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-----PLGL 68
LA ++DK + V L GR++ GTL +DQ N VL+ A E + D PLGL
Sbjct: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRPLGL 69
Query: 69 YVIRGENVVLIGELD 83
V RG V+L+ +D
Sbjct: 70 IVCRGTAVMLVSPVD 84
>gi|342883326|gb|EGU83840.1| hypothetical protein FOXB_05622 [Fusarium oxysporum Fo5176]
Length = 93
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQ--FANAVLEGACERVIVG 58
M+ A P+ S L YLDK+L V L RK++G L +D+ F N VL+ A E G
Sbjct: 1 MAPAQPELKKASLDLFCYLDKRLFVQLNGSRKVIGILRGYDKQVFLNIVLDEAVEEKDGG 60
Query: 59 DLYCDIPLGLYVIRGENVVLIGELD 83
+ +G+ VIRG +VV++ L+
Sbjct: 61 EKE---RIGMVVIRGNSVVMLEALE 82
>gi|58382854|ref|XP_312222.2| AGAP002706-PA [Anopheles gambiae str. PEST]
gi|170033098|ref|XP_001844416.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|55242066|gb|EAA07689.2| AGAP002706-PA [Anopheles gambiae str. PEST]
gi|167873530|gb|EDS36913.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 76
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L Y+DK+L + L GR + G L FD F N V++ + E G
Sbjct: 1 MSKAHPPE------LKKYMDKRLSLKLNGGRVVSGILRGFDPFMNVVVDESIEECKDGTR 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ LD
Sbjct: 55 NN---IGMVVIRGNSIIMVEALD 74
>gi|70983548|ref|XP_747301.1| small nuclear ribonucleoprotein SmG [Aspergillus fumigatus Af293]
gi|66844927|gb|EAL85263.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus
fumigatus Af293]
gi|159123693|gb|EDP48812.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus
fumigatus A1163]
Length = 78
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L Y++K++ L RK++G L +D F N VL+ A E G+ + +G+ VI
Sbjct: 5 QPELKKYMEKRVFCQLNGNRKVIGVLRGYDVFMNIVLDEAFEEKQGGE---KVAIGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|114050793|ref|NP_001040405.1| small nuclear ribonucleoprotein G [Bombyx mori]
gi|95102770|gb|ABF51326.1| small nuclear ribonucleoprotein G [Bombyx mori]
Length = 76
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
L ++DKK + L GR + G L FD F N VL+ + E G +G+ VIRG
Sbjct: 8 ELKKFMDKKWSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNN---VGMVVIRG 64
Query: 74 ENVVLIGELD 83
+++++ LD
Sbjct: 65 NSIIMLESLD 74
>gi|109112083|ref|XP_001087555.1| PREDICTED: small nuclear ribonucleoprotein G-like [Macaca
mulatta]
Length = 76
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL L GR + G L +FD F N V++ E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSSKLNGGRHVQGILWAFDPFMNLVIDEYVEMATSGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 55 NN---IGMVVIRGNSIIMLEALE 74
>gi|405122533|gb|AFR97299.1| hypothetical protein CNAG_04914 [Cryptococcus neoformans var.
grubii H99]
Length = 78
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L ++D++L + L+ GR++ G L +D F N V++ A E + G P G+ VI
Sbjct: 6 QPELKKFMDRRLFLHLQGGRQISGVLRGYDMFLNLVVDNAFEELGGGQRK---PCGMVVI 62
Query: 72 RGENVVLIGELDLER 86
RG +V + LD +R
Sbjct: 63 RGNSVSAMELLDNQR 77
>gi|58260010|ref|XP_567415.1| hypothetical protein CNJ03360 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57229465|gb|AAW45898.1| hypothetical protein CNJ03360 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 71
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 16 ASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGEN 75
A ++D++L + L+ GR++ G L +D F N V++ A E + G P G+ VIRG +
Sbjct: 3 AEFMDRRLFLHLQGGRQISGVLRGYDMFLNLVVDSAFEELGGGQRK---PCGMVVIRGNS 59
Query: 76 VVLIGELDLER 86
V + LD +R
Sbjct: 60 VSAMELLDNQR 70
>gi|406700597|gb|EKD03763.1| u6 snRNA-associated sm-like protein lsm8 [Trichosporon asahii
var. asahii CBS 8904]
Length = 129
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVI 71
++L + D+ + V+L DGR ++G L D + N +L + ER D + I LGLY+I
Sbjct: 2 SALEGFRDQLVQVILYDGRIIVGRLKGNDNYCNLILSDSVEREYSADKGVEMISLGLYMI 61
Query: 72 RGENV 76
+G+NV
Sbjct: 62 KGDNV 66
>gi|390331570|ref|XP_788177.3| PREDICTED: small nuclear ribonucleoprotein G-like
[Strongylocentrotus purpuratus]
Length = 77
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DK+L + L R++ G L FD F N V++ A E +
Sbjct: 1 MSKAHPPE------LKKFMDKRLSLKLNGNRRVTGVLRGFDPFMNLVIDEATEDISTTQ- 53
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
DI G+ V+RG +++L+ LD
Sbjct: 54 KNDI--GMVVVRGNSIILLEALD 74
>gi|383420999|gb|AFH33713.1| small nuclear ribonucleoprotein G [Macaca mulatta]
Length = 76
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S L ++DKKL + L GR + G L FD F N V++ E G +G+ VI
Sbjct: 6 SPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNN---IGMVVI 62
Query: 72 RGENVVLIGELD 83
RG +++++ L+
Sbjct: 63 RGNSIIMLEALE 74
>gi|429327489|gb|AFZ79249.1| small nuclear ribonucleoprotein-associated protein B, putative
[Babesia equi]
Length = 153
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE--RVIVGDLYCDIP--LG 67
+T + +L + V ++DGRK +GTL +FD+ N VL CE R+ G +I LG
Sbjct: 5 NTRMQQWLQYTVRVTVKDGRKFVGTLIAFDKHMNLVLA-DCEEFRMTKGKEGKEIKRTLG 63
Query: 68 LYVIRGENVV 77
++RGEN+V
Sbjct: 64 FILLRGENIV 73
>gi|386875009|ref|ZP_10117213.1| LSM domain protein [Candidatus Nitrosopumilus salaria BD31]
gi|386807169|gb|EIJ66584.1| LSM domain protein [Candidatus Nitrosopumilus salaria BD31]
Length = 74
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 12/81 (14%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L +D+ +L+ L+ + + GTL FDQ N +L+ + E GD LG V+RG+
Sbjct: 6 LDESIDQVVLIKLKGSKTIRGTLLGFDQHMNLLLDSSEEIPAEGDSKS---LGTIVVRGD 62
Query: 75 NVVLIGELDLERDELPPHLTH 95
NVV+I PP H
Sbjct: 63 NVVMIS---------PPPAQH 74
>gi|385804295|ref|YP_005840695.1| snRNP [Haloquadratum walsbyi C23]
gi|339729787|emb|CCC41068.1| RNA-binding protein Lsm [Haloquadratum walsbyi C23]
Length = 77
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEG--ACERVIVGDLYCDIPLGLYVIR 72
L + LD + + L+DG GTL +DQ NAVL+ A E V G L +IR
Sbjct: 9 LEAALDDTVTITLKDGSAYYGTLAGYDQHMNAVLDPAMASETVDPGALDVTEVEDTTIIR 68
Query: 73 GENVVLI 79
G+N+V I
Sbjct: 69 GDNIVTI 75
>gi|134116118|ref|XP_773230.1| hypothetical protein CNBJ0090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255852|gb|EAL18583.1| hypothetical protein CNBJ0090 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 78
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L ++D++L + L+ GR++ G L +D F N V++ A E + G P G+ VIRG
Sbjct: 9 LKKFMDRRLFLHLQGGRQISGVLRGYDMFLNLVVDSAFEELGGGQRK---PCGMVVIRGN 65
Query: 75 NVVLIGELDLER 86
+V + LD +R
Sbjct: 66 SVSAMELLDNQR 77
>gi|452986071|gb|EME85827.1| hypothetical protein MYCFIDRAFT_181789 [Pseudocercospora fijiensis
CIRAD86]
Length = 125
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-PLGLYVIR 72
LA Y+DK + V GR++ GTL +DQ N VL+ E D LGL V R
Sbjct: 38 DLAKYMDKDITVKFNGGREVTGTLKGYDQLMNLVLDNVKETTRDEDGNTSTRNLGLLVAR 97
Query: 73 GENVVLIGELD 83
G +VLI +D
Sbjct: 98 GTLLVLISPVD 108
>gi|443684081|gb|ELT88113.1| hypothetical protein CAPTEDRAFT_124620, partial [Capitella
teleta]
Length = 100
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD----LYCDI-PLGL 68
L+ YLDK + V GR+ G L FD N VL+G E + D L D PLGL
Sbjct: 12 DLSKYLDKPVRVKFSGGREACGILKGFDPLLNLVLDGCTENLRDPDDPFKLTEDTRPLGL 71
Query: 69 YVIRGENVVLI 79
V RG +VVLI
Sbjct: 72 VVCRGNSVVLI 82
>gi|221056216|ref|XP_002259246.1| hypothetical protein, conserved in Apicomplexan species
[Plasmodium knowlesi strain H]
gi|193809317|emb|CAQ40019.1| hypothetical protein, conserved in Apicomplexan species
[Plasmodium knowlesi strain H]
Length = 149
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 19 LDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG--DLYCDIPLGLYVIRGENV 76
+D + + RD + G L ++DQ N L E++I+ + + DI +G +IRG+N+
Sbjct: 17 IDTYIFISSRDNKLYQGILRTYDQHGNIFLTHCVEKIIIPERNYFSDIYVGNLIIRGDNI 76
Query: 77 VLIGELDLER 86
G +D ++
Sbjct: 77 AYFGSVDEDK 86
>gi|119484532|ref|XP_001262045.1| small nuclear ribonucleoprotein SmG, putative [Neosartorya
fischeri NRRL 181]
gi|121719811|ref|XP_001276604.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus
clavatus NRRL 1]
gi|119404816|gb|EAW15178.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus
clavatus NRRL 1]
gi|119410201|gb|EAW20148.1| small nuclear ribonucleoprotein SmG, putative [Neosartorya
fischeri NRRL 181]
Length = 78
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L Y++K++ L RK++G L +D F N VL+ A E G+ + +G+ VI
Sbjct: 5 QPELKKYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGE---KVAIGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|197127872|gb|ACH44370.1| putative small nuclear ribonucleoprotein polypeptide G
[Taeniopygia guttata]
Length = 76
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N V++ C + G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVID-ECVEMAAGGQ 53
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+I G+ VIRG +++++ L+
Sbjct: 54 QNNI--GMVVIRGNSIIMLEALE 74
>gi|115491153|ref|XP_001210204.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114197064|gb|EAU38764.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 78
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L Y++K++ L RK++G L +D F N VL+ A E G+ + +G+ VI
Sbjct: 5 QPELKKYMEKRVFCQLNGNRKVIGVLRGYDVFMNIVLDEAFEEKQGGE---KVAIGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|4507133|ref|NP_003087.1| small nuclear ribonucleoprotein G [Homo sapiens]
gi|13385994|ref|NP_080782.1| small nuclear ribonucleoprotein G [Mus musculus]
gi|94966887|ref|NP_001035633.1| small nuclear ribonucleoprotein G [Bos taurus]
gi|205360903|ref|NP_001128557.1| small nuclear ribonucleoprotein polypeptide G [Rattus norvegicus]
gi|301172846|ref|NP_001180369.1| small nuclear ribonucleoprotein G [Macaca mulatta]
gi|356640205|ref|NP_001239260.1| small nuclear ribonucleoprotein G [Canis lupus familiaris]
gi|109461740|ref|XP_001079708.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|296223614|ref|XP_002757696.1| PREDICTED: small nuclear ribonucleoprotein G-like [Callithrix
jacchus]
gi|297667399|ref|XP_002811973.1| PREDICTED: small nuclear ribonucleoprotein G isoform 2 [Pongo
abelii]
gi|301758206|ref|XP_002914946.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ailuropoda
melanoleuca]
gi|311252444|ref|XP_003125100.1| PREDICTED: small nuclear ribonucleoprotein G-like [Sus scrofa]
gi|332226773|ref|XP_003262565.1| PREDICTED: small nuclear ribonucleoprotein G isoform 1 [Nomascus
leucogenys]
gi|338714212|ref|XP_003363026.1| PREDICTED: small nuclear ribonucleoprotein G-like [Equus
caballus]
gi|344283913|ref|XP_003413715.1| PREDICTED: small nuclear ribonucleoprotein G-like [Loxodonta
africana]
gi|348566567|ref|XP_003469073.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cavia
porcellus]
gi|354491761|ref|XP_003508023.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cricetulus
griseus]
gi|392344154|ref|XP_003748887.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|402891180|ref|XP_003908832.1| PREDICTED: small nuclear ribonucleoprotein G [Papio anubis]
gi|403260478|ref|XP_003922698.1| PREDICTED: small nuclear ribonucleoprotein G [Saimiri boliviensis
boliviensis]
gi|410955001|ref|XP_003984147.1| PREDICTED: small nuclear ribonucleoprotein G [Felis catus]
gi|426223378|ref|XP_004005852.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ovis aries]
gi|59800216|sp|P62308.1|RUXG_HUMAN RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|59800217|sp|P62309.1|RUXG_MOUSE RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|109894862|sp|Q3ZBL0.1|RUXG_BOVIN RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|225734046|pdb|3CW1|G Chain G, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734055|pdb|3CW1|3 Chain 3, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734064|pdb|3CW1|4 Chain 4, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734073|pdb|3CW1|5 Chain 5, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|315583606|pdb|3PGW|G Chain G, Crystal Structure Of Human U1 Snrnp
gi|315583615|pdb|3PGW|J Chain J, Crystal Structure Of Human U1 Snrnp
gi|332639439|pdb|2Y9A|G Chain G, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639446|pdb|2Y9A|N Chain N, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639453|pdb|2Y9A|U Chain U, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639463|pdb|2Y9B|G Chain G, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639470|pdb|2Y9B|N Chain N, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639477|pdb|2Y9B|U Chain U, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639487|pdb|2Y9C|G Chain G, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639494|pdb|2Y9C|N Chain N, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639501|pdb|2Y9C|U Chain U, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639511|pdb|2Y9D|G Chain G, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639518|pdb|2Y9D|N Chain N, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639525|pdb|2Y9D|U Chain U, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|343781214|pdb|3S6N|G Chain G, Crystal Structure Of The Gemin2-Binding Domain Of Smn,
Gemin2 In Complex With Smd1D2FEG FROM HUMAN
gi|444302204|pdb|4F7U|G Chain G, Macromolecular Machine 6
gi|444302205|pdb|4F7U|J Chain J, Macromolecular Machine 6
gi|453055429|pdb|1VU2|H Chain H, The 8s Snrnp Assembly Intermediate
gi|453055437|pdb|1VU2|P Chain P, The 8s Snrnp Assembly Intermediate
gi|453055445|pdb|1VU2|X Chain X, The 8s Snrnp Assembly Intermediate
gi|453055453|pdb|1VU2|FF Chain f, The 8s Snrnp Assembly Intermediate
gi|453055461|pdb|1VU2|NN Chain n, The 8s Snrnp Assembly Intermediate
gi|453055469|pdb|1VU2|VV Chain v, The 8s Snrnp Assembly Intermediate
gi|453055473|pdb|1VU2|4 Chain 4, The 8s Snrnp Assembly Intermediate
gi|453055485|pdb|1VU3|H Chain H, The 8s Snrnp Assembly Intermediate
gi|453055493|pdb|1VU3|P Chain P, The 8s Snrnp Assembly Intermediate
gi|453055501|pdb|1VU3|X Chain X, The 8s Snrnp Assembly Intermediate
gi|453055509|pdb|1VU3|FF Chain f, The 8s Snrnp Assembly Intermediate
gi|453055517|pdb|1VU3|NN Chain n, The 8s Snrnp Assembly Intermediate
gi|453055525|pdb|1VU3|VV Chain v, The 8s Snrnp Assembly Intermediate
gi|453056017|pdb|4F77|P Chain P, The 8s Snrnp Assembly Intermediate
gi|453056025|pdb|4F77|H Chain H, The 8s Snrnp Assembly Intermediate
gi|453056033|pdb|4F77|X Chain X, The 8s Snrnp Assembly Intermediate
gi|453056041|pdb|4F77|FF Chain f, The 8s Snrnp Assembly Intermediate
gi|453056049|pdb|4F77|NN Chain n, The 8s Snrnp Assembly Intermediate
gi|453056057|pdb|4F77|VV Chain v, The 8s Snrnp Assembly Intermediate
gi|453056061|pdb|4F77|4 Chain 4, The 8s Snrnp Assembly Intermediate
gi|806566|emb|CAA59689.1| Sm protein G [Homo sapiens]
gi|12652645|gb|AAH00070.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|12849786|dbj|BAB28480.1| unnamed protein product [Mus musculus]
gi|12850471|dbj|BAB28732.1| unnamed protein product [Mus musculus]
gi|18490257|gb|AAH22432.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|20380602|gb|AAH27499.1| Small nuclear ribonucleoprotein polypeptide G [Mus musculus]
gi|30185984|gb|AAH51470.1| Small nuclear ribonucleoprotein polypeptide G [Mus musculus]
gi|42542824|gb|AAH66302.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|47682759|gb|AAH70166.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|48145953|emb|CAG33199.1| SNRPG [Homo sapiens]
gi|62420278|gb|AAX81996.1| unknown [Homo sapiens]
gi|62948132|gb|AAH94411.1| Small nuclear ribonucleoprotein polypeptide G [Mus musculus]
gi|73586825|gb|AAI03237.1| Small nuclear ribonucleoprotein polypeptide G [Bos taurus]
gi|76779243|gb|AAI06056.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|119620223|gb|EAW99817.1| small nuclear ribonucleoprotein polypeptide G, isoform CRA_a
[Homo sapiens]
gi|119620224|gb|EAW99818.1| small nuclear ribonucleoprotein polypeptide G, isoform CRA_a
[Homo sapiens]
gi|127799349|gb|AAH71880.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|148666745|gb|EDK99161.1| mCG130514, isoform CRA_a [Mus musculus]
gi|149036610|gb|EDL91228.1| rCG56468, isoform CRA_b [Rattus norvegicus]
gi|197246583|gb|AAI68750.1| Snrpg protein [Rattus norvegicus]
gi|208967440|dbj|BAG73734.1| small nuclear ribonucleoprotein polypeptide G [synthetic
construct]
gi|296477039|tpg|DAA19154.1| TPA: small nuclear ribonucleoprotein polypeptide G-like [Bos
taurus]
gi|296482417|tpg|DAA24532.1| TPA: small nuclear ribonucleoprotein G [Bos taurus]
gi|312153260|gb|ADQ33142.1| small nuclear ribonucleoprotein polypeptide G [synthetic
construct]
gi|380808500|gb|AFE76125.1| small nuclear ribonucleoprotein G [Macaca mulatta]
gi|384944568|gb|AFI35889.1| small nuclear ribonucleoprotein G [Macaca mulatta]
gi|410265648|gb|JAA20790.1| small nuclear ribonucleoprotein polypeptide G [Pan troglodytes]
gi|410348384|gb|JAA40796.1| small nuclear ribonucleoprotein polypeptide G [Pan troglodytes]
gi|431912604|gb|ELK14622.1| Small nuclear ribonucleoprotein G [Pteropus alecto]
Length = 76
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N V++ E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 55 NN---IGMVVIRGNSIIMLEALE 74
>gi|410730333|ref|XP_003671346.2| hypothetical protein NDAI_0G03260 [Naumovozyma dairenensis CBS
421]
gi|401780164|emb|CCD26103.2| hypothetical protein NDAI_0G03260 [Naumovozyma dairenensis CBS
421]
Length = 76
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLY-V 70
+ L Y+DKK+L+ L RK+ G L +D F N V++ A E G + LG+ V
Sbjct: 4 TPELKKYMDKKILIQLNGSRKIAGILRGYDIFLNVVIDDAVEVSADGSKH---QLGIQTV 60
Query: 71 IRGENVVLIGELD 83
IRG ++V + LD
Sbjct: 61 IRGNSIVALEALD 73
>gi|403216098|emb|CCK70596.1| hypothetical protein KNAG_0E03380 [Kazachstania naganishii CBS
8797]
Length = 77
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGL-YV 70
+ L Y+DKK+++ + RK+ GT+ FD F N VL+ A E ++ + PLG V
Sbjct: 4 TPELKRYMDKKVVLQINGSRKVAGTMRGFDLFLNVVLDDAVE--LLQEEGKTSPLGSPTV 61
Query: 71 IRGENVVLIGELD 83
IRG ++V I L+
Sbjct: 62 IRGNSIVSIESLE 74
>gi|109122308|ref|XP_001087684.1| PREDICTED: small nuclear ribonucleoprotein G-like [Macaca
mulatta]
gi|354490736|ref|XP_003507512.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cricetulus
griseus]
gi|344246755|gb|EGW02859.1| Small nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 76
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N V++ E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILWGFDPFMNLVIDECVEMATSGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 55 NN---IGMVVIRGNSIIMLEALE 74
>gi|221220698|gb|ACM09010.1| Small nuclear ribonucleoprotein G [Salmo salar]
gi|221221936|gb|ACM09629.1| Small nuclear ribonucleoprotein G [Salmo salar]
Length = 76
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR++ G L FD F N V++ C + G +
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRQVQGVLRGFDPFMNLVMD-DCLEMAPGGI 53
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
I G+ VIRG +++++ L+
Sbjct: 54 QNTI--GMVVIRGNSIIMLEALE 74
>gi|281212625|gb|EFA86785.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 82
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
M + P D L LDKK+ V L R ++G L FD F N VL+ E V
Sbjct: 1 MVFGKPQD----PDLTKLLDKKMNVKLNGNRTVIGILRGFDSFMNIVLKDTVE---VTYP 53
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
I +G+ VIRG ++V++ L+
Sbjct: 54 QEQINMGMVVIRGNSIVMMEPLE 76
>gi|71033639|ref|XP_766461.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353418|gb|EAN34178.1| hypothetical protein TP01_0940 [Theileria parva]
Length = 162
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL--YCDIPLGLYVI 71
SL L + V LRD +G SFDQF N V+ A +++I+ + + DI G VI
Sbjct: 16 SLEDELGSLIWVTLRDDTFYVGLFKSFDQFGNIVITDAVKKIILNNKRSFSDIYCGYTVI 75
Query: 72 RGENVVLIGELDL 84
RGE++ +D+
Sbjct: 76 RGESISYFCAIDV 88
>gi|241594929|ref|XP_002404416.1| small nuclear ribonucleoprotein G, putative [Ixodes scapularis]
gi|215500409|gb|EEC09903.1| small nuclear ribonucleoprotein G, putative [Ixodes scapularis]
Length = 76
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
LS + Y+DKKL + L R + G L FD F N VL+ E G+ + +G+ V
Sbjct: 4 LSFFFSRYMDKKLSLRLNGSRVITGILRGFDPFMNLVLDETVEETKGGEKH---DIGMVV 60
Query: 71 IRGENVVLIGELD 83
+RG ++VL+ D
Sbjct: 61 VRGNSIVLLESQD 73
>gi|296488612|tpg|DAA30725.1| TPA: small nuclear ribonucleoprotein polypeptide G-like [Bos
taurus]
Length = 76
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
L ++DKKL + L GR + G L FD F N V++ E G +G+ VIRG
Sbjct: 8 KLKKFMDKKLSLKLNGGRHVQGILWGFDPFMNLVIDECVEMATSGQQNN---IGMVVIRG 64
Query: 74 ENVVLIGELD 83
+++++ L+
Sbjct: 65 NSIIMLEALE 74
>gi|67522076|ref|XP_659099.1| hypothetical protein AN1495.2 [Aspergillus nidulans FGSC A4]
gi|40744652|gb|EAA63808.1| hypothetical protein AN1495.2 [Aspergillus nidulans FGSC A4]
gi|259486817|tpe|CBF84982.1| TPA: small nuclear ribonucleoprotein SmG, putative
(AFU_orthologue; AFUA_8G04960) [Aspergillus nidulans
FGSC A4]
Length = 78
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L Y++K++ L RK++G L +D F N VL+ A E G+ + +G+ VI
Sbjct: 5 QPELKKYMEKRVFCELNGNRKVIGVLRGYDVFMNIVLDEAFEEKPGGE---KVAIGMIVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|238483149|ref|XP_002372813.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus flavus
NRRL3357]
gi|317139686|ref|XP_001817686.2| small nuclear ribonucleoprotein G [Aspergillus oryzae RIB40]
gi|220700863|gb|EED57201.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus flavus
NRRL3357]
Length = 78
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L Y++K++ L RK++G L +D F N VL+ A E G+ + +G+ VI
Sbjct: 5 QPELKKYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGE---KVAIGMVVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|159042090|ref|YP_001541342.1| like-Sm ribonucleoprotein core [Caldivirga maquilingensis IC-167]
gi|157920925|gb|ABW02352.1| Like-Sm ribonucleoprotein core [Caldivirga maquilingensis IC-167]
Length = 79
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 10 YLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLY 69
++ L+S + +LV LRDG + GTL ++DQ N +L+ E + D I G+
Sbjct: 8 FVQDELSSVVGSTVLVKLRDGTTIRGTLKNYDQHMNLLLDDTEEII---DPKTSIKRGMV 64
Query: 70 VIRGENVVLIGEL 82
VIRG+ V+ + +
Sbjct: 65 VIRGDTVLFVSPI 77
>gi|58261590|ref|XP_568205.1| U6 snRNA binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115921|ref|XP_773347.1| hypothetical protein CNBI2880 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255971|gb|EAL18700.1| hypothetical protein CNBI2880 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230287|gb|AAW46688.1| U6 snRNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 131
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
+LA ++DK + V GR+ G L +DQ N V++ E D LGL V+RG
Sbjct: 28 NLAQFVDKSIRVKFMGGREATGILKGYDQLMNLVMDDVVEE--YEDGRPTRSLGLVVLRG 85
Query: 74 ENVVLIGELD 83
N+VL+ D
Sbjct: 86 PNIVLVSPTD 95
>gi|399217457|emb|CCF74344.1| unnamed protein product [Babesia microti strain RI]
Length = 499
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD--LYCDIPLGLYVI 71
SL L + V LRD +G +FDQ+ N VL A ++++V + ++ D+ G +I
Sbjct: 17 SLEEELGSLIWVSLRDDTFYVGIFKTFDQYGNVVLSDAVQKIVVPEKRIFSDLYNGHLII 76
Query: 72 RGENVVLIGELDLER 86
RGE++ +D R
Sbjct: 77 RGESIAYFCAIDTAR 91
>gi|317036310|ref|XP_001398084.2| small nuclear ribonucleoprotein G [Aspergillus niger CBS 513.88]
gi|358372686|dbj|GAA89288.1| small nuclear ribonucleoprotein SmG [Aspergillus kawachii IFO
4308]
Length = 78
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
L Y++K++ L RK++G L +D F N VL+ A E G+ + +G+ VI
Sbjct: 5 QPELKKYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGE---KVAIGMIVI 61
Query: 72 RGENVVLIGELD 83
RG +VV++ L+
Sbjct: 62 RGNSVVMLEALE 73
>gi|452002106|gb|EMD94564.1| hypothetical protein COCHEDRAFT_1221931 [Cochliobolus
heterostrophus C5]
Length = 135
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI---PLGLYVI 71
L+ Y+DK++ V GR+++GTL +DQ N VL+ E + D + +I LGL V
Sbjct: 52 LSKYMDKQITVKFSGGREVIGTLKGYDQLMNLVLDEVKEALT--DEHGNIRYRKLGLIVA 109
Query: 72 RGENVVLIGELD 83
RG +V+I +D
Sbjct: 110 RGTLLVVISPVD 121
>gi|241951220|ref|XP_002418332.1| small nuclear ribonucleoprotein G (snRNP-G), putative [Candida
dubliniensis CD36]
gi|223641671|emb|CAX43632.1| small nuclear ribonucleoprotein G (snRNP-G), putative [Candida
dubliniensis CD36]
Length = 74
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L SY+DKKL + L RK++G L +D F N L A E G+ + +G VIRG
Sbjct: 7 LKSYMDKKLSIQLNGSRKIIGILRGYDIFLNITLTDALEVDSKGE---KMNIGATVIRGN 63
Query: 75 NVVLIGELD 83
++V I L+
Sbjct: 64 SIVSIEALE 72
>gi|109465326|ref|XP_001075060.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
Length = 76
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L R++ G L FD F N V++ E V G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGTRRVQGILRGFDPFTNLVIDECVEMVTSGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G VIRG +++++ L+
Sbjct: 55 NN---IGTVVIRGNSIIMLETLE 74
>gi|118101457|ref|XP_001233287.1| PREDICTED: uncharacterized protein LOC771344 isoform 1 [Gallus
gallus]
gi|126303310|ref|XP_001372569.1| PREDICTED: small nuclear ribonucleoprotein G-like [Monodelphis
domestica]
gi|395507378|ref|XP_003758002.1| PREDICTED: small nuclear ribonucleoprotein G [Sarcophilus
harrisii]
gi|387018738|gb|AFJ51487.1| Sm protein G [Crotalus adamanteus]
Length = 76
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N V++ C + G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVID-ECVEMAPGGQ 53
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+I G+ VIRG +++++ L+
Sbjct: 54 QNNI--GMVVIRGNSIIMLEALE 74
>gi|321263450|ref|XP_003196443.1| U6 snRNA binding protein [Cryptococcus gattii WM276]
gi|317462919|gb|ADV24656.1| U6 snRNA binding protein, putative [Cryptococcus gattii WM276]
Length = 111
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
+LA ++DK + V GR+ G L +DQ N V++ E D LGL V+RG
Sbjct: 28 NLAQFVDKSIRVKFMGGREATGILKGYDQLMNLVMDDVVEE--YEDGRPTRSLGLVVLRG 85
Query: 74 ENVVLIGELD 83
N+VL+ D
Sbjct: 86 PNIVLVSPTD 95
>gi|47026939|gb|AAT08690.1| small nuclear ribonucleoprotein polypeptide G [Hyacinthus
orientalis]
Length = 96
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 22 KLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGE 81
KL + L R ++GTL FDQF N V++ E + G+ DI G+ VIRG +VV+I
Sbjct: 33 KLQIKLNANRVVVGTLRGFDQFMNLVIDNTME--VNGNDKNDI--GMVVIRGNSVVMIEA 88
Query: 82 LD 83
L+
Sbjct: 89 LE 90
>gi|428673171|gb|EKX74084.1| conserved hypothetical protein [Babesia equi]
Length = 168
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG------DLYCDIPLG 67
SL L + V LRD +G SFDQ+ N V+ A +++IV DLYC G
Sbjct: 22 SLEDELGSLVWVTLRDDTFYVGLFKSFDQYGNIVITDAVKKIIVNEKKSFSDLYC----G 77
Query: 68 LYVIRGENVVLIGELDL 84
VIRGE++ +D+
Sbjct: 78 YTVIRGESISYFCAIDV 94
>gi|355750359|gb|EHH54697.1| hypothetical protein EGM_15585 [Macaca fascicularis]
Length = 76
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL L GR + G L FD F N V++ E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSSKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 55 NN---IGMVVIRGNSIIMLEALE 74
>gi|319401867|ref|NP_001187842.1| small nuclear ribonucleoprotein g [Ictalurus punctatus]
gi|308324118|gb|ADO29194.1| small nuclear ribonucleoprotein g [Ictalurus punctatus]
Length = 76
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N V++ + E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDSIEISAGGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 55 NS---IGMVVIRGNSIIMLEALE 74
>gi|17510511|ref|NP_491032.1| Protein SNR-7 [Caenorhabditis elegans]
gi|29428018|sp|Q9N4G9.1|RUXG_CAEEL RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|12276019|gb|AAG50222.1|AF303264_1 SM protein G [Caenorhabditis elegans]
gi|351062434|emb|CCD70411.1| Protein SNR-7 [Caenorhabditis elegans]
Length = 77
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
L Y+DK++ + L R++ G L FD F N V++ A E G + LG+ VIRG
Sbjct: 8 ELKKYMDKEMDLKLNGNRRVSGILRGFDPFMNMVIDEAVEYQKDG---GSVNLGMTVIRG 64
Query: 74 ENVVLI 79
+VV++
Sbjct: 65 NSVVIM 70
>gi|405119724|gb|AFR94496.1| U6 snRNA binding protein [Cryptococcus neoformans var. grubii
H99]
Length = 131
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
+LA ++DK + V GR+ G L +DQ N V++ E D LGL V+RG
Sbjct: 28 NLAQFVDKSIRVKFMGGREATGILKGYDQLMNLVMDDVVEEYE--DGRPTRSLGLVVLRG 85
Query: 74 ENVVLIGELD 83
N+VL+ D
Sbjct: 86 PNIVLVSPTD 95
>gi|403418112|emb|CCM04812.1| predicted protein [Fibroporia radiculosa]
Length = 355
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLG 67
L ++DKKL V L+ GRK+ GTL +D F N VL+ A E + P+G
Sbjct: 9 LKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVLDDATEETTPAQKH---PIG 58
>gi|440492280|gb|ELQ74861.1| Small nuclear ribonucleoprotein (snRNP) LSM3 [Trachipleistophora
hominis]
Length = 65
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 14/67 (20%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
+ SYL++K+ + LRD KL G LC FD+ N L +VGD + +RG+
Sbjct: 12 VKSYLEEKVCIYLRDRSKLEGVLCGFDEHMNVGL-------LVGDEFV-------TVRGD 57
Query: 75 NVVLIGE 81
++V+IG+
Sbjct: 58 SIVMIGQ 64
>gi|403301993|ref|XP_003941654.1| PREDICTED: small nuclear ribonucleoprotein G-like [Saimiri
boliviensis boliviensis]
Length = 76
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N V++ E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILWGFDPFMNLVIDECVEMATSGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG ++++ L+
Sbjct: 55 NN---IGMVVIRGNGIIMLEALE 74
>gi|313217530|emb|CBY38609.1| unnamed protein product [Oikopleura dioica]
gi|313236587|emb|CBY19879.1| unnamed protein product [Oikopleura dioica]
Length = 76
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++D+K+ V + GRK+ G L FD F N V++ A E
Sbjct: 1 MSKAHPPE------LKKFMDRKMSVKVNGGRKVEGVLRGFDPFMNLVIDDAIEYRKDNSS 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+ +G+ VIRG +V++I ++
Sbjct: 55 HT---MGMCVIRGNSVLMIEAME 74
>gi|403221300|dbj|BAM39433.1| uncharacterized protein TOT_010000889 [Theileria orientalis
strain Shintoku]
Length = 162
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL--YCDIPLGLYVI 71
SL L + V LRD +G SFDQF N V+ A +++++ + DI G VI
Sbjct: 16 SLEDELGSLIWVTLRDDTFYVGLFKSFDQFGNIVITDAVKKIVISSKRSFSDIYCGYTVI 75
Query: 72 RGENVVLIGELD 83
RGE++ +D
Sbjct: 76 RGESISYFCSID 87
>gi|402084831|gb|EJT79849.1| hypothetical protein GGTG_04932 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 143
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD-LYCDIPLGLYVIR 72
LA Y+DK++ V GR++ GTL +D N VL+ E + D PLGL VIR
Sbjct: 57 DLARYMDKEVQVKFNGGREVTGTLKGYDALMNLVLDDVKETMRDDDGNETSRPLGLVVIR 116
Query: 73 G 73
G
Sbjct: 117 G 117
>gi|221120336|ref|XP_002162004.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Hydra
magnipapillata]
Length = 76
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS P + L Y+DK+L + L R + G L FD F N V++ E +
Sbjct: 1 MSKTNPPE------LKKYMDKRLHLKLNCNRSVTGILRGFDPFMNLVIDDTVENTSTQER 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +VVL+ LD
Sbjct: 55 NN---IGMVVIRGNSVVLMEALD 74
>gi|293345587|ref|XP_002726075.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
Length = 76
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L R++ G L FD F N V++ E V G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGTRRVQGILRGFDPFMNLVIDECVEMVTSGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G VIRG +++++ L+
Sbjct: 55 NI---IGTVVIRGNSIIMLETLE 74
>gi|238492871|ref|XP_002377672.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
flavus NRRL3357]
gi|317156803|ref|XP_003190769.1| U6 snRNA-associated Sm-like protein LSm7 [Aspergillus oryzae RIB40]
gi|220696166|gb|EED52508.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
flavus NRRL3357]
Length = 133
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE--RVIVGDLYCDIPLGLYVIR 72
L+ Y+DK++ V GR+++GTL FDQ N VL+ E R G+ LGL V R
Sbjct: 50 LSKYMDKEVRVKFNGGREVVGTLKGFDQLMNLVLDDVKESMRDDEGNENT-RSLGLIVAR 108
Query: 73 GENVVLIGELD 83
G +VLI D
Sbjct: 109 GTIIVLISPAD 119
>gi|313213028|emb|CBY36907.1| unnamed protein product [Oikopleura dioica]
gi|313234529|emb|CBY10486.1| unnamed protein product [Oikopleura dioica]
Length = 106
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERV-IVGDLYCDIP----LGLY 69
L YLDK + V + GR+ G L FDQ N V++ E++ V D Y LGL
Sbjct: 21 LNKYLDKAIRVKFQGGREASGILKGFDQLLNLVIDSTTEQLRDVDDPYRPSTESRNLGLV 80
Query: 70 VIRGENVVLIGELD 83
V RG +VVLI D
Sbjct: 81 VCRGTSVVLISPQD 94
>gi|322703623|gb|EFY95229.1| U6 snRNA-associated protein LSm7, putative [Metarhizium anisopliae
ARSEF 23]
Length = 134
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-PLGLYVIRG 73
LA Y+DK++ V GR++ GTL +D N VL+ E V + PLGL V RG
Sbjct: 51 LAKYMDKEITVKFNGGREVTGTLKGYDALMNLVLDEVRETVRDEEGNESTRPLGLVVARG 110
Query: 74 ENVVLIGELD 83
+V+I +D
Sbjct: 111 TLLVVIAPVD 120
>gi|227827656|ref|YP_002829436.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus M.14.25]
gi|227830352|ref|YP_002832132.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus
L.S.2.15]
gi|229579169|ref|YP_002837567.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus
Y.G.57.14]
gi|229582076|ref|YP_002840475.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus
Y.N.15.51]
gi|229584860|ref|YP_002843362.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus M.16.27]
gi|238619824|ref|YP_002914650.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus M.16.4]
gi|284997857|ref|YP_003419624.1| Like-Sm ribonucleoprotein, core [Sulfolobus islandicus L.D.8.5]
gi|385773326|ref|YP_005645892.1| Sm ribonucleoprotein core-like protein [Sulfolobus islandicus
HVE10/4]
gi|385775964|ref|YP_005648532.1| archaeal Sm1 protein [Sulfolobus islandicus REY15A]
gi|227456800|gb|ACP35487.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus L.S.2.15]
gi|227459452|gb|ACP38138.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus M.14.25]
gi|228009883|gb|ACP45645.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus Y.G.57.14]
gi|228012792|gb|ACP48553.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus Y.N.15.51]
gi|228019910|gb|ACP55317.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus M.16.27]
gi|238380894|gb|ACR41982.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus M.16.4]
gi|284445752|gb|ADB87254.1| Like-Sm ribonucleoprotein, core [Sulfolobus islandicus L.D.8.5]
gi|323474712|gb|ADX85318.1| archaeal Sm1 protein [Sulfolobus islandicus REY15A]
gi|323477440|gb|ADX82678.1| Sm ribonucleoprotein core-like protein [Sulfolobus islandicus
HVE10/4]
Length = 76
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
LA L+ +LV L+ +++ GTL S+DQ N VL + E I D LG VIRG+
Sbjct: 9 LAESLNNLVLVKLKGNKEVRGTLRSYDQHMNLVLSDSEE--IQSD-GSGKKLGTIVIRGD 65
Query: 75 NVVLIGEL 82
NV+LI L
Sbjct: 66 NVILISPL 73
>gi|284413736|ref|NP_001165120.1| small nuclear ribonucleoprotein polypeptide G [Xenopus (Silurana)
tropicalis]
gi|138519693|gb|AAI35835.1| LOC100125174 protein [Xenopus (Silurana) tropicalis]
Length = 76
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N V++ E I G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECTE--ISGGG 52
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+ + +G+ VIRG +++++ L+
Sbjct: 53 HQNT-IGMVVIRGNSIIMLEALE 74
>gi|70944071|ref|XP_742007.1| u6 snRNA-associated sm-like protein [Plasmodium chabaudi
chabaudi]
gi|56520743|emb|CAH81648.1| u6 snRNA-associated sm-like protein, putative [Plasmodium
chabaudi chabaudi]
Length = 65
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 41 DQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLERD 87
DQ N +L G C I + I LG+Y+IRG+NV LIGE+D E D
Sbjct: 1 DQTTNIIL-GNCYERIYKESLEKISLGIYIIRGDNVTLIGEIDEEVD 46
>gi|397641777|gb|EJK74845.1| hypothetical protein THAOC_03454 [Thalassiosira oceanica]
Length = 1567
Score = 42.0 bits (97), Expect = 0.093, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE--------RVIVGDLYCDI 64
+ L Y++ +L + L DGR ++GT +FD+ N VL A E I+ +
Sbjct: 1263 SKLLRYVEHRLRISLADGRTIVGTFLAFDKHLNLVLVDAEEFRTLKSSRAAILEERVEKR 1322
Query: 65 PLGLYVIRGENVV 77
LGL ++RGENVV
Sbjct: 1323 SLGLIILRGENVV 1335
>gi|426257282|ref|XP_004022258.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ovis aries]
Length = 76
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P L ++DKKL + L GR + G L FD F N V++ E G
Sbjct: 1 MSKAHP------PKLKKFMDKKLSLKLNGGRHVQGILQGFDPFMNLVIDECVEMATSGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
G+ VIRG +++++ L+
Sbjct: 55 NN---TGMVVIRGNSIIMLEALE 74
>gi|440900234|gb|ELR51419.1| Small nuclear ribonucleoprotein G [Bos grunniens mutus]
Length = 76
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P L ++DKK+ + L GR + G L FD F N V++ E G
Sbjct: 1 MSKAHP------PKLKKFMDKKVSLKLNGGRHVQGILQGFDPFMNLVIDECVEMATSGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 55 NN---IGMVVIRGNSIIMLEALE 74
>gi|291386619|ref|XP_002709854.1| PREDICTED: small nuclear ribonucleoprotein polypeptide G
[Oryctolagus cuniculus]
Length = 76
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N V++ E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMANSGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 55 NN---IGMVVIRGNSIIMLEALE 74
>gi|109077009|ref|XP_001097013.1| PREDICTED: small nuclear ribonucleoprotein G-like [Macaca
mulatta]
Length = 75
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S L ++DKKL + L GR + G L FD F N V++ E G +G+ VI
Sbjct: 6 SPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNN---IGMVVI 62
Query: 72 RGENVVL 78
RG +++L
Sbjct: 63 RGNSIML 69
>gi|157119614|ref|XP_001659450.1| Sm protein G, putative [Aedes aegypti]
gi|108875262|gb|EAT39487.1| AAEL008719-PA [Aedes aegypti]
Length = 76
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L Y+DK+L + L GR + G L FD F N VL+ + E
Sbjct: 1 MSKAHPPE------LKKYMDKRLSLKLNGGRVVSGILRGFDPFMNVVLDESIEECKDSTR 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ LD
Sbjct: 55 NN---IGMVVIRGNSIIMVEALD 74
>gi|229367628|gb|ACQ58794.1| Small nuclear ribonucleoprotein G [Anoplopoma fimbria]
Length = 76
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N V++ + E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDSLEMGPGGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 55 NT---IGMVVIRGNSIIMLEALE 74
>gi|223995851|ref|XP_002287599.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976715|gb|EED95042.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 113
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 17/85 (20%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVL-----------------EGACER 54
+ L Y++ +L V L DGR ++GT +FD+ N VL GA
Sbjct: 3 GSKLLRYIEHRLRVSLSDGRTIIGTFLAFDKHLNLVLVDTEEFRTLRSSNSKSNGGAGRA 62
Query: 55 VIVGDLYCDIPLGLYVIRGENVVLI 79
IV + LGL ++RGENVV I
Sbjct: 63 AIVEERQEKRSLGLIILRGENVVSI 87
>gi|305662480|ref|YP_003858768.1| Sm ribonucleoprotein-like protein [Ignisphaera aggregans DSM
17230]
gi|304377049|gb|ADM26888.1| Like-Sm ribonucleoprotein core [Ignisphaera aggregans DSM 17230]
Length = 78
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
LA L + +L+ LR G+ + G L S+D N VL+ A E + G LG +IRGE
Sbjct: 14 LAESLGQMVLIKLRGGKSVRGKLRSYDLHLNIVLDDAEEELSDGSWR---KLGTVLIRGE 70
Query: 75 NVVLI 79
NVV+I
Sbjct: 71 NVVVI 75
>gi|326437234|gb|EGD82804.1| N-alpha-acetyltransferase 38 [Salpingoeca sp. ATCC 50818]
Length = 117
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 35 GTLCSFDQFANAVLEGACERVIVGDLYCDI-PLGLYVIRGENV 76
GTL FDQ N +L + ERV+ ++ PLGLY+IRG+NV
Sbjct: 73 GTLRGFDQATNLILTDSSERVVSLHEGVEVVPLGLYIIRGDNV 115
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERV 55
+ +YL KK+ V+ +DG ++GTL FDQ N +L + ERV
Sbjct: 1 MDAYLKKKIAVVTQDGHFIVGTLRGFDQATNLILTDSSERV 41
>gi|291398958|ref|XP_002715163.1| PREDICTED: small nuclear ribonucleoprotein polypeptide G
[Oryctolagus cuniculus]
Length = 76
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N V++ E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILRGFDPFINLVIDECVEMANSGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 55 NN---IGMVVIRGNSIIMLEALE 74
>gi|389646277|ref|XP_003720770.1| hypothetical protein MGG_02938 [Magnaporthe oryzae 70-15]
gi|351638162|gb|EHA46027.1| hypothetical protein MGG_02938 [Magnaporthe oryzae 70-15]
gi|440483313|gb|ELQ63726.1| hypothetical protein OOW_P131scaffold00952g14 [Magnaporthe oryzae
P131]
Length = 146
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE--RVIVGDLYCDIPLGLYVI 71
LA Y+DK++ V GR+++GTL +D N VL+ E R G+ PLGL V+
Sbjct: 60 DLAKYMDKEVQVKFNGGREVIGTLKGYDALMNLVLDEVKETMRDEEGN-ESSRPLGLVVV 118
Query: 72 RGENVVLIGELD 83
RG +V I D
Sbjct: 119 RGTLLVAISPTD 130
>gi|118398961|ref|XP_001031807.1| Sm protein [Tetrahymena thermophila]
gi|89286141|gb|EAR84144.1| Sm protein [Tetrahymena thermophila SB210]
Length = 159
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 17 SYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP-------LGLY 69
++D ++ V ++DGR L+GT +FD+ N VL E + P LGL
Sbjct: 9 QWIDYRVRVTIQDGRMLVGTFLAFDKHLNLVLSETEEFRPIKPKTKGEPERQTKRILGLV 68
Query: 70 VIRGENVVLI 79
+IRGEN+V I
Sbjct: 69 IIRGENIVSI 78
>gi|410930990|ref|XP_003978880.1| PREDICTED: small nuclear ribonucleoprotein G-like [Takifugu
rubripes]
gi|47207638|emb|CAF90891.1| unnamed protein product [Tetraodon nigroviridis]
Length = 76
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N V++ E +G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDETLE---MGPG 51
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 52 GQQSSIGMVVIRGNSIIMLEALE 74
>gi|15227722|ref|NP_178480.1| U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana]
gi|30678085|ref|NP_849931.1| U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana]
gi|4582434|gb|AAD24820.1| putative snRNP splicing factor [Arabidopsis thaliana]
gi|27765062|gb|AAO23652.1| At2g03870 [Arabidopsis thaliana]
gi|110742944|dbj|BAE99367.1| putative snRNP splicing factor [Arabidopsis thaliana]
gi|330250666|gb|AEC05760.1| U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana]
gi|330250667|gb|AEC05761.1| U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana]
Length = 99
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP-----LGL 68
LA ++DK + V L GR++ GTL +DQ N VL+ A E V D LGL
Sbjct: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFVRDHDDPLKTTDQTRRLGL 69
Query: 69 YVIRGENVVLIGELDLERDELPPHLTHVSV 98
V RG V+L+ D + P +T +V
Sbjct: 70 IVCRGTAVMLVSPTDGTEEIANPFVTAEAV 99
>gi|168012739|ref|XP_001759059.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689758|gb|EDQ76128.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 102
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-----PLGLY 69
LA ++D+ + V L GR++ GTL +DQ N VL+ A E + D LGL
Sbjct: 11 LAKFVDRGVSVKLSGGRQVTGTLKGYDQLLNLVLDEATENLRDSDDPLKTTDQMRQLGLI 70
Query: 70 VIRGENVVLIGELDLERDELPPHLTHVSVA 99
V RG V+L+ D + P L + + A
Sbjct: 71 VCRGTAVMLVAPTDGTEEIANPFLANETPA 100
>gi|296417819|ref|XP_002838548.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634491|emb|CAZ82739.1| unnamed protein product [Tuber melanosporum]
Length = 125
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 21/80 (26%)
Query: 25 VLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV--IRGENVVLIGEL 82
V LRDGRKL+G L S+DQ L C +P Y +R NV+L+GE+
Sbjct: 29 VALRDGRKLIGVLRSWDQQT---------------LSCRVPSSAYTSGMR-TNVLLLGEI 72
Query: 83 DLER-DELPPHLTHVSVAEI 101
DL+R D++P SV E+
Sbjct: 73 DLDREDDIP--FRRASVEEV 90
>gi|70947410|ref|XP_743323.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56522766|emb|CAH80747.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 119
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 28 RDGRKLMGTLCSFDQFANAVLEGACERVIV--GDLYCDIPLGLYVIRGENVVLIGELDLE 85
RD + +G L ++DQ N L E++I+ + + D+ +G +IRG+N+ G +D
Sbjct: 3 RDNKLYLGILRTYDQHGNIFLTHCVEKIIIPEQNYFSDVYVGNLIIRGDNIAYFGSIDES 62
Query: 86 RDELPPHLTHVSVAEIKRVSALF 108
+ E + + + E + L+
Sbjct: 63 KYEKMFNYSQKDINENSQGENLY 85
>gi|302786868|ref|XP_002975205.1| hypothetical protein SELMODRAFT_415303 [Selaginella
moellendorffii]
gi|302791693|ref|XP_002977613.1| hypothetical protein SELMODRAFT_417493 [Selaginella
moellendorffii]
gi|300154983|gb|EFJ21617.1| hypothetical protein SELMODRAFT_417493 [Selaginella
moellendorffii]
gi|300157364|gb|EFJ23990.1| hypothetical protein SELMODRAFT_415303 [Selaginella
moellendorffii]
Length = 101
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-----PLGL 68
LA ++DK + V L GR+++GTL +DQ N VL+ A E + D LGL
Sbjct: 10 DLAKFIDKGVCVKLSGGRQVIGTLKGYDQLLNLVLDEAVEYLRDHDDPLKTTDQTRALGL 69
Query: 69 YVIRGENVVLIGELDLERDELPPHLTH 95
V RG V+L+ D + P +T
Sbjct: 70 VVCRGTAVMLVAPTDGTEEIANPFVTQ 96
>gi|448734412|ref|ZP_21716638.1| small nuclear ribonucleoprotein, lsm family [Halococcus
salifodinae DSM 8989]
gi|445800460|gb|EMA50815.1| small nuclear ribonucleoprotein, lsm family [Halococcus
salifodinae DSM 8989]
Length = 79
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGA---CERVIVGDLYCDIPLGLYVI 71
L + L + + V L+DG G+L +DQ N VLE A E G++ + +I
Sbjct: 10 LEATLGESVAVRLKDGEIYTGSLAGYDQHMNVVLEPASNDAEPPTPGEVGVETVESTTII 69
Query: 72 RGENVVLI 79
RG+NVV I
Sbjct: 70 RGDNVVTI 77
>gi|425770497|gb|EKV08967.1| Small nuclear ribonucleoprotein (LSM7), putative [Penicillium
digitatum Pd1]
gi|425771863|gb|EKV10295.1| Small nuclear ribonucleoprotein (LSM7), putative [Penicillium
digitatum PHI26]
Length = 125
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE--RVIVGDLYCDIPLGLYVIR 72
L+ Y+DK++ V GR+++GTL +DQ N VL+ E R G+ +GL V R
Sbjct: 42 LSKYMDKEVQVKFNGGREVIGTLKGYDQLMNLVLDDVKETMRDEEGNTTT-RSMGLIVAR 100
Query: 73 GENVVLIGELD 83
G +VLI D
Sbjct: 101 GTLIVLISPAD 111
>gi|328770153|gb|EGF80195.1| hypothetical protein BATDEDRAFT_11709 [Batrachochytrium
dendrobatidis JAM81]
Length = 70
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 18 YLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENV 76
Y+D+KL V L RK+ G L +D F N VLE A E + G+ LG V+RG ++
Sbjct: 4 YMDRKLFVQLNGNRKVTGVLRGYDPFMNIVLEDASEELGDGEKNF---LGSIVVRGNSI 59
>gi|355567875|gb|EHH24216.1| hypothetical protein EGK_07838 [Macaca mulatta]
Length = 76
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL L GR + G L +FD F N V++ E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSSKLNGGRHVQGILRAFDPFMNLVIDEYVEMATSGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VI+G +++++ L+
Sbjct: 55 NN---IGMVVIQGNSIIMLEALE 74
>gi|322694161|gb|EFY85998.1| U6 snRNA-associated protein LSm7, putative [Metarhizium acridum
CQMa 102]
Length = 135
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-PLGLYVIRG 73
LA Y+DK++ V GR++ GTL +D N VL+ E V + PLGL V RG
Sbjct: 52 LAKYMDKEITVKFNGGREVTGTLKGYDALMNLVLDEVRETVRDEEGNESTRPLGLVVARG 111
Query: 74 ENVVLIGELD 83
+V+I +D
Sbjct: 112 TLLVVITPVD 121
>gi|358421445|ref|XP_003584961.1| PREDICTED: small nuclear ribonucleoprotein G-like [Bos taurus]
gi|296486781|tpg|DAA28894.1| TPA: small nuclear ribonucleoprotein polypeptide G-like [Bos
taurus]
Length = 76
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N V++ E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRLVQGILRGFDPFMNLVIDECVEMATSGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 55 NN---IGMVVIRGNSIIMLEALE 74
>gi|390939095|ref|YP_006402833.1| Sm ribonucleoprotein-like protein [Desulfurococcus fermentans DSM
16532]
gi|390192202|gb|AFL67258.1| Like-Sm ribonucleoprotein core [Desulfurococcus fermentans DSM
16532]
Length = 75
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L L K++L+ +D L G L SFDQ N VL+ A E + G LG VIRG+
Sbjct: 9 LEENLGKQVLIKTKDNIPLRGKLRSFDQHLNIVLDDAEEILSNGSTR---KLGTVVIRGD 65
Query: 75 NVVLIGEL 82
VVLI L
Sbjct: 66 TVVLISPL 73
>gi|448729283|ref|ZP_21711600.1| small nuclear ribonucleoprotein, lsm family [Halococcus
saccharolyticus DSM 5350]
gi|445795230|gb|EMA45759.1| small nuclear ribonucleoprotein, lsm family [Halococcus
saccharolyticus DSM 5350]
Length = 79
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLE---GACERVIVGDLYCDIPLGLYVI 71
L + L + V L+DG G+L +DQ N VLE G E G++ + +I
Sbjct: 10 LEATLGDSVAVRLKDGEIYTGSLAGYDQHMNVVLEPASGDAEPPTPGEVGVETVESTTII 69
Query: 72 RGENVVLI 79
RG+NVV I
Sbjct: 70 RGDNVVTI 77
>gi|19075840|ref|NP_588340.1| U6 snRNP-associated protein Lsm7 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74626865|sp|O74499.1|LSM7_SCHPO RecName: Full=U6 snRNA-associated Sm-like protein LSm7
gi|3581912|emb|CAA20851.1| U6 snRNP-associated protein Lsm7 (predicted) [Schizosaccharomyces
pombe]
Length = 113
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV---GDLYCDI-PLGLYV 70
L+ Y D+++ GR++ G L FDQ N VL+ E++ G L I LGL V
Sbjct: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87
Query: 71 IRGENVVLIGELD 83
+RG +VLI +D
Sbjct: 88 VRGTTLVLIAPMD 100
>gi|71012485|ref|XP_758502.1| hypothetical protein UM02355.1 [Ustilago maydis 521]
gi|46098160|gb|EAK83393.1| hypothetical protein UM02355.1 [Ustilago maydis 521]
Length = 175
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP-----LGLY 69
L+ Y+D+K+ V GR++ GTL FDQ N V++ E V D ++ LGL
Sbjct: 91 LSKYMDQKIRVKFAGGREVFGTLKGFDQLMNLVMDEVTESVR--DEEGNVTDKTRNLGLV 148
Query: 70 VIRGENVVLIGELD 83
V+RG + +I D
Sbjct: 149 VLRGTALTVINPAD 162
>gi|429327915|gb|AFZ79675.1| small nuclear ribonucleoprotein G, putative [Babesia equi]
Length = 81
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S L +++K+L V L R ++G L +D F N VL+ A E +VGD I LG+ V+
Sbjct: 9 SADLRRFMEKRLDVHLNGSRHVVGVLRGYDTFMNIVLDNALE--VVGD--DQIDLGIVVL 64
Query: 72 RGENVV 77
RG +++
Sbjct: 65 RGNSII 70
>gi|399576624|ref|ZP_10770379.1| small nuclear ribonucleoprotein, lsm family [Halogranum salarium
B-1]
gi|399238068|gb|EJN58997.1| small nuclear ribonucleoprotein, lsm family [Halogranum salarium
B-1]
Length = 77
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGA--CERVIVGDLYCDIPLGLYVIR 72
L + L++ + V L+DG + GTL +DQ N VLE + + +G+L + +IR
Sbjct: 9 LEASLNEPVTVQLKDGAEYYGTLAGYDQHMNVVLEESLDVDDDALGELDVEAVEDTTIIR 68
Query: 73 GENVVLI 79
G+NVV I
Sbjct: 69 GDNVVTI 75
>gi|443899154|dbj|GAC76485.1| hypothetical protein PANT_22d00050 [Pseudozyma antarctica T-34]
Length = 536
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERV 55
L +LDK++ V ++ GRK+ GTL FD F N V++ A E+V
Sbjct: 9 LKRFLDKRIAVNIQGGRKVQGTLRGFDMFLNLVVDDAIEQV 49
>gi|430811238|emb|CCJ31332.1| unnamed protein product [Pneumocystis jirovecii]
Length = 66
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 13 TSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERV--IVGDLYCDIPLGLYV 70
++L ++++KK++++ DGR L G L FDQ N ++ E++ + G + G Y+
Sbjct: 2 SALQAFVNKKVMIVTSDGRILTGHLTGFDQTTNLIISEVDEKLFSMEGTQVTKVD-GAYL 60
Query: 71 IRGENV 76
+RG+N+
Sbjct: 61 VRGDNM 66
>gi|345563731|gb|EGX46716.1| hypothetical protein AOL_s00097g464 [Arthrobotrys oligospora ATCC
24927]
Length = 168
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE--RVIVGDLYCDIPLGLYVI 71
LA Y+DK+++V GR++ G L +DQ N VL+ E R G+ LGL V
Sbjct: 81 DLAKYMDKRIIVKFSGGREVTGALKGYDQLMNLVLDDVQEVMRDDEGNEQT-RELGLVVA 139
Query: 72 RGENVVLIGELD 83
RG +VLI +D
Sbjct: 140 RGPLLVLISPVD 151
>gi|167043902|gb|ABZ08590.1| putative LSM domain protein [uncultured marine crenarchaeote
HF4000_APKG3H9]
gi|167044597|gb|ABZ09270.1| putative LSM domain protein [uncultured marine crenarchaeote
HF4000_APKG7F11]
Length = 76
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L ++K +L+ L+ + + G L FDQ N +L+ A E + GD LG V+RG+
Sbjct: 10 LDESINKTVLIKLKGNKTIRGNLLGFDQHMNLLLDQAEEILSDGDSNS---LGSLVVRGD 66
Query: 75 NVVLI 79
NVV+I
Sbjct: 67 NVVMI 71
>gi|291234910|ref|XP_002737389.1| PREDICTED: Small Nuclear Ribonucleoprotein family member
(snr-2)-like [Saccoglossus kowalevskii]
Length = 97
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 18/84 (21%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP----- 65
L L S+L+++L + + DGR L+GT DQ N +L G+CE Y + P
Sbjct: 14 LRKKLESWLNRRLRICMTDGRTLIGTFLCTDQERNVIL-GSCEE------YVNPPDTTEK 66
Query: 66 -----LGLYVIRGENVVLIGELDL 84
LGL ++ G+++V I E+D+
Sbjct: 67 EEPRVLGLAMVPGQHIVTI-EVDM 89
>gi|302310596|ref|XP_453405.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199425041|emb|CAH00501.2| KLLA0D07678p [Kluyveromyces lactis]
Length = 73
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S L Y+DKKL++ L RK++G L +D F N VL+ + G++ V+
Sbjct: 3 SPDLRKYMDKKLILQLNGNRKIIGILRGYDAFLNLVLDNPIQIFEEGEVQMG---PQTVV 59
Query: 72 RGENVVLIGELD 83
RG ++V I LD
Sbjct: 60 RGNSIVSIEPLD 71
>gi|326427331|gb|EGD72901.1| small nuclear ribonucleoprotein G [Salpingoeca sp. ATCC 50818]
Length = 76
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L +LDKKL + L RK+ G L FD F N V++ E G+ + +G+ VI
Sbjct: 6 APELKRFLDKKLELKLNANRKVSGILRGFDPFMNIVMDQTVEHKPDGE---QVKIGVVVI 62
Query: 72 RGENVVLIGELD 83
RG ++ + L+
Sbjct: 63 RGNSIATMKGLE 74
>gi|134083643|emb|CAK47035.1| unnamed protein product [Aspergillus niger]
Length = 105
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
Y++K++ L RK++G L +D F N VL+ A E G+ + +G+ VIRG
Sbjct: 19 FQQYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGE---KVAIGMIVIRGN 75
Query: 75 NVVLI 79
+VV++
Sbjct: 76 SVVML 80
>gi|225710716|gb|ACO11204.1| Small nuclear ribonucleoprotein G [Caligus rogercresseyi]
Length = 79
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
L ++DK++ + L R + G L +D F N VLE E G P+G VIRG
Sbjct: 10 ELKKFMDKRVQLKLNASRNMEGILRGYDPFMNLVLEEGIETTKQGHRN---PVGTVVIRG 66
Query: 74 ENVVLIGELD 83
++V++ D
Sbjct: 67 NSIVMLEAKD 76
>gi|388852751|emb|CCF53669.1| probable SMX2-snRNP G protein [Ustilago hordei]
Length = 87
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERV 55
L +LDK++ V ++ GRK+ GTL FD F N V++ A E+V
Sbjct: 8 ELKRFLDKRIAVNIQGGRKIQGTLRGFDMFLNLVVDDAIEQV 49
>gi|340370971|ref|XP_003384019.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Amphimedon queenslandica]
Length = 78
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
L Y+DK+L + L R + G L FD + N VL+ E + +G+ V+RG
Sbjct: 9 ELKKYMDKRLQLRLNGNRTITGILRGFDPYMNVVLDDCVEER---SSHQKFNIGMVVVRG 65
Query: 74 ENVVLIGELD 83
+VVLI L+
Sbjct: 66 NSVVLIEALE 75
>gi|225711834|gb|ACO11763.1| Small nuclear ribonucleoprotein G [Lepeophtheirus salmonis]
gi|225714162|gb|ACO12927.1| Small nuclear ribonucleoprotein G [Lepeophtheirus salmonis]
gi|290562395|gb|ADD38594.1| Small nuclear ribonucleoprotein G [Lepeophtheirus salmonis]
Length = 79
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
L ++DK++ + L R + G L +D F N VLE E G P+G VIRG
Sbjct: 10 ELKKFMDKRVQLKLNASRNMEGILRGYDPFMNLVLEEGIETTKQGHRN---PVGTIVIRG 66
Query: 74 ENVVLIGELD 83
++V++ D
Sbjct: 67 NSIVMLEAKD 76
>gi|426248212|ref|XP_004017858.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ovis aries]
Length = 76
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N V++ E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRLVQGILWGFDPFMNLVIDECVEMATSGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
G+ VIRG +++++ L+
Sbjct: 55 NN---FGMVVIRGNSIIMLEALE 74
>gi|410079813|ref|XP_003957487.1| hypothetical protein KAFR_0E01990 [Kazachstania africana CBS
2517]
gi|372464073|emb|CCF58352.1| hypothetical protein KAFR_0E01990 [Kazachstania africana CBS
2517]
Length = 107
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
+S L YL+KK++++ +G+ ++GTL FD+ N +L ER + DI + +
Sbjct: 1 MSPLLKEYLNKKVVIVTTEGQCVIGTLEGFDKSTNLLLSSVYERFAKPE---DITSQVQI 57
Query: 71 IRGENVVLIGELDLERD 87
+RG VVL G D + D
Sbjct: 58 LRGSEVVLCGLYDDKAD 74
>gi|303276466|ref|XP_003057527.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461879|gb|EEH59172.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 77
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 18 YLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-PLGLYVIRGENV 76
Y+DKKL + L R ++G L FDQF N VL+ C V D D PLG+ V+RG ++
Sbjct: 6 YMDKKLRLKLNGNRGVVGVLRGFDQFLNLVLD-EC----VDDSTSDKEPLGMVVVRGNSI 60
>gi|343428207|emb|CBQ71737.1| probable SMX2-snRNP G protein [Sporisorium reilianum SRZ2]
Length = 87
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERV 55
L +LDK++ V ++ GRK+ GTL FD F N V++ A E+V
Sbjct: 8 ELKRFLDKRIAVNIQGGRKIQGTLRGFDMFLNLVVDDAVEQV 49
>gi|453087944|gb|EMF15985.1| U6 snRNA-associated Sm-like protein LSm7 [Mycosphaerella populorum
SO2202]
Length = 134
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE--RVIVGDLYCDIPLGLYVIR 72
L+ YL+K + V GR++ GTL FDQ N VL+ E R G+ LGL V R
Sbjct: 48 LSKYLEKGITVKFNGGREVTGTLKGFDQLMNLVLDNVKETTRDEEGNTST-RNLGLLVAR 106
Query: 73 GENVVLIGELD 83
G +VLI +D
Sbjct: 107 GTLLVLISPVD 117
>gi|410957729|ref|XP_003985477.1| PREDICTED: small nuclear ribonucleoprotein G-like [Felis catus]
Length = 76
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F + V++ E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILRGFDSFMHLVIDECVEMATSGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 55 NN---IGMVVIRGNSIIMLEALE 74
>gi|354459631|pdb|3SWN|C Chain C, Structure Of The Lsm657 Complex: An Assembly Intermediate
Of The Lsm1 7 And Lsm2 8 Rings
gi|354459634|pdb|3SWN|F Chain F, Structure Of The Lsm657 Complex: An Assembly Intermediate
Of The Lsm1 7 And Lsm2 8 Rings
gi|354459637|pdb|3SWN|O Chain O, Structure Of The Lsm657 Complex: An Assembly Intermediate
Of The Lsm1 7 And Lsm2 8 Rings
gi|354459640|pdb|3SWN|R Chain R, Structure Of The Lsm657 Complex: An Assembly Intermediate
Of The Lsm1 7 And Lsm2 8 Rings
Length = 117
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV---GDLYCDI-PLGLYV 70
L+ Y D+++ GR++ G L FDQ N VL+ E++ G L I LGL V
Sbjct: 32 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 91
Query: 71 IRGENVVLIGELDLERDELP 90
+RG +VLI +D +E+P
Sbjct: 92 VRGTTLVLIAPMDGS-EEIP 110
>gi|302409510|ref|XP_003002589.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261358622|gb|EEY21050.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 221
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 21/25 (84%)
Query: 20 DKKLLVLLRDGRKLMGTLCSFDQFA 44
DKKL+V LRDGRKL+G L S+DQF
Sbjct: 50 DKKLMVALRDGRKLIGVLRSWDQFG 74
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 58 GDLYCDIPLGLYVIRGENVVLIGEL 82
G LY DI G++++RGENV+L+GE+
Sbjct: 150 GGLYADIKRGVFLVRGENVLLLGEI 174
>gi|329765899|ref|ZP_08257464.1| like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|393795327|ref|ZP_10378691.1| like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum limnia
BG20]
gi|329137605|gb|EGG41876.1| like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 78
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 12/81 (14%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L +++ +L+ L+ G+ + G L FDQ N +L+ + E + G+ LG V+RG+
Sbjct: 10 LDESINQIVLIKLKGGKTIRGNLLGFDQHMNLLLDSSEEIPVEGNSKS---LGTIVVRGD 66
Query: 75 NVVLIGELDLERDELPPHLTH 95
NVV+I PP T+
Sbjct: 67 NVVMIS---------PPPATN 78
>gi|109510961|ref|XP_001057009.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|392343298|ref|XP_003754845.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|392355788|ref|XP_003752134.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
Length = 76
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F + V++ E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILQGFDPFMSLVIDECVEMATSGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 55 NN---IGMVVIRGNSIIMLEALE 74
>gi|84995270|ref|XP_952357.1| small nuclear ribonucleoprotein associated protein b [Theileria
annulata strain Ankara]
gi|65302518|emb|CAI74625.1| small nuclear ribonucleoprotein associated protein b, putative
[Theileria annulata]
Length = 155
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE--RVIVGD----LYCDIP 65
+T + +L + V L+D RK +GTL +FD++ N VL CE R+ +G
Sbjct: 5 NTRMQHWLQYNVRVTLKDNRKFVGTLVAFDKYMNLVLS-DCEEFRMTLGKDKNRTEVKRT 63
Query: 66 LGLYVIRGENVV 77
LG ++RGEN+V
Sbjct: 64 LGFVLLRGENIV 75
>gi|343427570|emb|CBQ71097.1| related to snRNP protein [Sporisorium reilianum SRZ2]
Length = 143
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE--RVIVGDLYCDI-PLGLYVI 71
L+ Y+D+K+ V GR++ GTL FDQ N V++ E R G++ LGL V+
Sbjct: 59 LSKYMDQKIRVKFAGGREVFGTLKGFDQLMNLVMDEVTESLRDDEGNVTDKTRNLGLVVL 118
Query: 72 RGENVVLIGELD 83
RG + +I D
Sbjct: 119 RGTALTVINPAD 130
>gi|290992103|ref|XP_002678674.1| predicted protein [Naegleria gruberi]
gi|284092287|gb|EFC45930.1| predicted protein [Naegleria gruberi]
Length = 83
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 9/76 (11%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE--RVIVG------DLYCD 63
++ L +L+ ++ + L+DGR+++G +FD+F N V+ CE R I+ ++
Sbjct: 2 NSKLYQFLNYRMRITLQDGRQIVGKFMAFDKFMNLVV-ADCEEFRKIIPKGSKGEEVEQK 60
Query: 64 IPLGLYVIRGENVVLI 79
LG +IRGEN++ I
Sbjct: 61 RSLGFLLIRGENIISI 76
>gi|390349986|ref|XP_798585.3| PREDICTED: LSM7 homolog, U6 small nuclear RNA associated (S.
cerevisiae)-like [Strongylocentrotus purpuratus]
Length = 104
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD----LYCDI-PLGL 68
L+ Y+DK++ V + GR++ G L FD N VL+G E + D L D LGL
Sbjct: 16 DLSKYIDKQIRVKFQGGREVTGVLKGFDPLLNLVLDGTTEFMRDPDDPFKLTDDTRNLGL 75
Query: 69 YVIRGENVVLI 79
V RG +VVLI
Sbjct: 76 AVCRGTSVVLI 86
>gi|13541906|ref|NP_111594.1| small nuclear ribonucleoprotein (snRNP)-like protein
[Thermoplasma volcanium GSS1]
gi|14325338|dbj|BAB60242.1| small nuclear ribonucleoprotein [Thermoplasma volcanium GSS1]
Length = 71
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L ++K++ +LL+D R L GTL +D + N VL+ E LG VIRG
Sbjct: 8 LEESVNKRVSLLLKDNRVLEGTLTGYDDYMNMVLDDVDE----NSENVSRKLGTVVIRGS 63
Query: 75 NVVLI 79
NVV I
Sbjct: 64 NVVRI 68
>gi|84489967|ref|YP_448199.1| small nuclear ribonucleoprotein [Methanosphaera stadtmanae DSM
3091]
gi|84373286|gb|ABC57556.1| putative snRNP Sm-like protein [Methanosphaera stadtmanae DSM
3091]
Length = 81
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
+L L+ ++L+ L+ G++ G L SFD N VL A E + G+ C LG+ ++RG
Sbjct: 16 ALGQALNSQVLIKLKGGKEFRGALQSFDMHMNLVLNDA-EEIKDGESIC--RLGVVLVRG 72
Query: 74 ENVVLI 79
+N+V I
Sbjct: 73 DNIVYI 78
>gi|342886030|gb|EGU85973.1| hypothetical protein FOXB_03482 [Fusarium oxysporum Fo5176]
Length = 133
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI--PLGLYVI 71
L Y+DK++ V GR++ GTL +D N VL+ E V+ D D LGL V+
Sbjct: 48 DLGKYMDKQITVKFNGGREVKGTLKGYDALMNLVLDDVHE-VVRDDEGNDSTRSLGLVVV 106
Query: 72 RGENVVLIGELD 83
RG +VL+ +D
Sbjct: 107 RGTLLVLVSPVD 118
>gi|302677314|ref|XP_003028340.1| hypothetical protein SCHCODRAFT_258381 [Schizophyllum commune H4-8]
gi|300102028|gb|EFI93437.1| hypothetical protein SCHCODRAFT_258381 [Schizophyllum commune H4-8]
Length = 118
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L+ Y+++++ V GR++ G L +DQ N VL+ E V++ + + LGL V+RG
Sbjct: 38 LSKYVNERIRVKFTGGREVTGLLKGYDQLLNLVLDEVTEDVLLPEPHQRS-LGLAVLRGP 96
Query: 75 NVVLIGELD 83
+ L+ +D
Sbjct: 97 TITLVSPVD 105
>gi|432864568|ref|XP_004070353.1| PREDICTED: small nuclear ribonucleoprotein G-like [Oryzias
latipes]
Length = 76
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N V++ E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVMDDCLEMGPGGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 55 NT---IGMVVIRGNSIIMLEALE 74
>gi|388579558|gb|EIM19880.1| DUF21-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 625
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD 59
L Y+DK++LV L+ RK+ G L FD F N VL+ A + G+
Sbjct: 10 LKKYMDKRVLVHLQANRKVTGQLRGFDLFLNLVLDDASDETFAGE 54
>gi|363748558|ref|XP_003644497.1| hypothetical protein Ecym_1454 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888129|gb|AET37680.1| hypothetical protein Ecym_1454 [Eremothecium cymbalariae
DBVPG#7215]
Length = 76
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLY-V 70
+ L Y+++KL + L RK++G L +D F N VL+ A E G + PLG + V
Sbjct: 4 TPELKKYMERKLFIQLNGSRKVVGVLRGYDVFLNVVLDDALEVHKNGRKF---PLGDHTV 60
Query: 71 IRGENVVLIGELD 83
IRG ++V + L+
Sbjct: 61 IRGNSIVSLEPLE 73
>gi|12838881|dbj|BAB24361.1| unnamed protein product [Mus musculus]
gi|12849807|dbj|BAB28489.1| unnamed protein product [Mus musculus]
Length = 71
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Query: 68 LYVIRGENVVLIGELDLERDELPPHLTHVSVAEI 101
++V+RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 1 IFVVRGENVVLLGEIDLEKESDTP-LQQVSIEEI 33
>gi|401842941|gb|EJT44937.1| SMX2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 67
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 19 LDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLY-VIRGENVV 77
+DKK+L+ + RK+ G L +D F N VL+ A E + D + PLGL VIRG +++
Sbjct: 1 MDKKILLNINGSRKIAGVLRGYDIFLNVVLDDAME-INGKDPASNHPLGLQTVIRGNSII 59
Query: 78 LIGELD 83
+ LD
Sbjct: 60 SLEALD 65
>gi|330917406|ref|XP_003297804.1| hypothetical protein PTT_08326 [Pyrenophora teres f. teres 0-1]
gi|311329333|gb|EFQ94110.1| hypothetical protein PTT_08326 [Pyrenophora teres f. teres 0-1]
Length = 131
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI---PLGLYVI 71
L+ Y+DK++ V GR+++GTL +DQ N VL+ E + D +I LGL V
Sbjct: 48 LSKYMDKQITVKFSGGREVVGTLKGYDQLMNLVLDEVKEALT--DDQGNIRYRKLGLIVA 105
Query: 72 RGENVVLIGELD 83
RG +V+I +D
Sbjct: 106 RGTLLVVISPVD 117
>gi|145349929|ref|XP_001419379.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579610|gb|ABO97672.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 100
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-----PLGLY 69
LA ++D+ + V L GR++ GTL +DQ N VL+ A E + + I LGL
Sbjct: 10 LARFIDRGVRVKLSGGREVTGTLKGYDQLLNLVLDEAIEHLRDAEDALKISDETRALGLL 69
Query: 70 VIRGENVVLIGELD 83
V RG +V+++ LD
Sbjct: 70 VCRGTSVMVVSALD 83
>gi|145499845|ref|XP_001435907.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403043|emb|CAK68510.1| unnamed protein product [Paramecium tetraurelia]
Length = 138
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 12/81 (14%)
Query: 17 SYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE-----RVIVGDLYCDIPLGLYVI 71
++D ++ + L DGR L+GT +FD+ N +L CE + + ++ LG+ ++
Sbjct: 9 QWIDYRVRITLGDGRMLVGTFLAFDKHLNVILS-ECEEYRIRKQGIHEIETKRTLGMIIV 67
Query: 72 RGENVVLIGELDLERDELPPH 92
RG+N++ + E PPH
Sbjct: 68 RGDNIISLSA------EAPPH 82
>gi|145491875|ref|XP_001431936.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399043|emb|CAK64538.1| unnamed protein product [Paramecium tetraurelia]
Length = 126
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 12/81 (14%)
Query: 17 SYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE-----RVIVGDLYCDIPLGLYVI 71
++D ++ + L DGR L+GT +FD+ N +L CE + + ++ LG+ ++
Sbjct: 9 QWIDYRVRITLGDGRMLVGTFLAFDKHLNVILS-ECEEYRIRKQGIHEIETKRTLGMIIV 67
Query: 72 RGENVVLIGELDLERDELPPH 92
RG+N++ + E PPH
Sbjct: 68 RGDNIISLSA------EAPPH 82
>gi|354481504|ref|XP_003502941.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cricetulus
griseus]
gi|344250923|gb|EGW07027.1| Small nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 76
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
S L ++DKKL + L GR + G L FD F N V++ E G + + VI
Sbjct: 6 SPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNN---ISMVVI 62
Query: 72 RGENVVLIGELD 83
RG +++++ L+
Sbjct: 63 RGNSIIMLEALE 74
>gi|451845213|gb|EMD58526.1| hypothetical protein COCSADRAFT_194481 [Cochliobolus sativus
ND90Pr]
Length = 136
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-PLGLYVIRG 73
L+ Y+DK++ V GR+++GTL +DQ N VL+ E + D LGL V RG
Sbjct: 53 LSKYMDKQITVKFSGGREVIGTLKGYDQLMNLVLDEVKEALTDEDGNIRYRKLGLIVARG 112
Query: 74 ENVVLIGELD 83
+V+I +D
Sbjct: 113 TLLVVISPVD 122
>gi|366991963|ref|XP_003675747.1| hypothetical protein NCAS_0C03930 [Naumovozyma castellii CBS
4309]
gi|342301612|emb|CCC69383.1| hypothetical protein NCAS_0C03930 [Naumovozyma castellii CBS
4309]
Length = 76
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLY-VIRG 73
L Y+DKK+L+ L RK+ G L +D F N V++ A E G + LG+ VIRG
Sbjct: 7 LKKYMDKKILLQLNGSRKVAGILRGYDIFLNVVVDDAVEVSKDGSKH---QLGMQTVIRG 63
Query: 74 ENVVLIGELD 83
++V + LD
Sbjct: 64 NSIVSLEALD 73
>gi|302921652|ref|XP_003053324.1| hypothetical protein NECHADRAFT_59475 [Nectria haematococca mpVI
77-13-4]
gi|256734264|gb|EEU47611.1| hypothetical protein NECHADRAFT_59475 [Nectria haematococca mpVI
77-13-4]
Length = 133
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI--PLGLYVIR 72
LA Y+DK++ V GR++ GTL +D N VL+ E V+ D + LGL V+R
Sbjct: 49 LAKYMDKQITVKFNGGREVKGTLKGYDALMNLVLDDVHE-VVRDDEGNESTRSLGLVVVR 107
Query: 73 GENVVLIGELD 83
G +VL+ +D
Sbjct: 108 GTLLVLVSPVD 118
>gi|71664396|ref|XP_819179.1| U6 snRNA-associated Sm-like protein LSm8p [Trypanosoma cruzi
strain CL Brener]
gi|70884469|gb|EAN97328.1| U6 snRNA-associated Sm-like protein LSm8p [Trypanosoma cruzi]
Length = 127
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 25/94 (26%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI------------------ 56
L YL +++ V+ DGR L+G L + DQ N VL ERV
Sbjct: 2 LTHYLRRRVSVITTDGRYLVGVLHAADQLLNVVLTSCVERVFDEARENAGGSQEQQENQP 61
Query: 57 -------VGDLYCDIPLGLYVIRGENVVLIGELD 83
G + ++P+G+ +IRG +VV + +D
Sbjct: 62 MSSNDNSGGGMMQELPMGVMMIRGSDVVCVAAVD 95
>gi|14318502|ref|NP_116636.1| Smx2p [Saccharomyces cerevisiae S288c]
gi|730760|sp|P40204.1|RUXG_YEAST RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|499706|gb|AAB63977.1| small nuclear ribonucleoprotein E [Saccharomyces cerevisiae]
gi|559938|emb|CAA86353.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45270816|gb|AAS56789.1| YFL017W-A [Saccharomyces cerevisiae]
gi|285811877|tpg|DAA12422.1| TPA: Smx2p [Saccharomyces cerevisiae S288c]
Length = 77
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG-DLYCDIPLGLY- 69
+ L Y+DKK+L+ + RK+ G L +D F N VL+ A E I G D + LGL
Sbjct: 4 TPELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAME--INGEDPANNHQLGLQT 61
Query: 70 VIRGENVVLIGELD 83
VIRG +++ + LD
Sbjct: 62 VIRGNSIISLEALD 75
>gi|384497931|gb|EIE88422.1| hypothetical protein RO3G_13133 [Rhizopus delemar RA 99-880]
Length = 76
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L Y+DK++ + L RK+ G L +D F N VL+ E V + +G+ VI
Sbjct: 6 TPELKKYMDKRISLQLNGNRKVTGVLRGYDPFMNIVLDETVEEVSPTERNN---IGMVVI 62
Query: 72 RGENVVLIGELD 83
RG ++ ++ L+
Sbjct: 63 RGNSIAIMEALE 74
>gi|340519781|gb|EGR50019.1| predicted protein [Trichoderma reesei QM6a]
Length = 100
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE--RVIVGDLYCDIPLGLYVIR 72
LA Y+DK+++V GR++ GTL +D N VL+ E R G+ LGL V+R
Sbjct: 18 LAKYMDKEIIVKFNGGREVRGTLKGYDALMNLVLDQVQETLRDDEGN-ESSRSLGLVVVR 76
Query: 73 GENVVLIGELD 83
G +VLI D
Sbjct: 77 GTLLVLISPAD 87
>gi|320164748|gb|EFW41647.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 77
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
+ L +LD+++++ L RK+ G L FD F N VL+ E V + + +G+ I
Sbjct: 6 NPELKKFLDRRVILKLNGNRKVSGILRGFDPFMNVVLDETFEEVSESERH---EIGMVAI 62
Query: 72 RGENVVLIGELD 83
RG ++ ++ +D
Sbjct: 63 RGNSINMVETVD 74
>gi|367021900|ref|XP_003660235.1| hypothetical protein MYCTH_2050348 [Myceliophthora thermophila ATCC
42464]
gi|347007502|gb|AEO54990.1| hypothetical protein MYCTH_2050348 [Myceliophthora thermophila ATCC
42464]
Length = 141
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
L Y+DK++ V GR+ G L +D N VL+ E ++ G+ PLGL V+RG
Sbjct: 59 DLKKYMDKRITVKFNGGREATGVLKGYDALMNLVLD-EVEELLRGNEMTR-PLGLVVVRG 116
Query: 74 ENVVLIGELD 83
+V+I +D
Sbjct: 117 TLLVVISPVD 126
>gi|189208804|ref|XP_001940735.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976828|gb|EDU43454.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 131
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI---PLGLYVI 71
L+ Y+DK++ V GR+++GTL +DQ N VL+ E + D +I LGL V
Sbjct: 48 LSKYMDKQITVKFSGGREVIGTLKGYDQLMNLVLDEVKEALT--DDEGNIRYRKLGLIVA 105
Query: 72 RGENVVLIGELD 83
RG +V+I +D
Sbjct: 106 RGTLLVVISPVD 117
>gi|449544087|gb|EMD35061.1| hypothetical protein CERSUDRAFT_85794 [Ceriporiopsis
subvermispora B]
Length = 93
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
LA Y+++++ V GR++ G L +DQ N VL+ E++ LGL V+RG
Sbjct: 11 DLAKYVNERIRVKFTGGREVTGVLKGYDQLLNLVLDEVEEQLQTEGELKTRSLGLVVLRG 70
Query: 74 ENVVLIGELD 83
V L+ +D
Sbjct: 71 PTVTLLSPVD 80
>gi|16081975|ref|NP_394385.1| hypothetical protein Ta0927 [Thermoplasma acidophilum DSM 1728]
gi|10640204|emb|CAC12056.1| hypothetical protein [Thermoplasma acidophilum]
Length = 67
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L ++K++ +LL+D R L G L FD++ N VL+ E LG V+RG
Sbjct: 4 LEESVNKRVSLLLKDNRVLEGVLTGFDEYMNMVLDDVDE----NSENVSRKLGTVVVRGS 59
Query: 75 NVVLI 79
NVV I
Sbjct: 60 NVVRI 64
>gi|145230750|ref|XP_001389639.1| U6 snRNA-associated Sm-like protein LSm7 [Aspergillus niger CBS
513.88]
gi|134055758|emb|CAK44131.1| unnamed protein product [Aspergillus niger]
gi|350638639|gb|EHA26995.1| hypothetical protein ASPNIDRAFT_205537 [Aspergillus niger ATCC
1015]
Length = 136
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE--RVIVGDLYCDIPLGLYVI 71
L Y+DK++ V GR+++GTL +DQ N VL+ E R G+ LGL V
Sbjct: 52 DLNKYMDKEVRVKFNGGREVIGTLKGYDQLMNLVLDDVKESMRDDEGNENT-RSLGLVVA 110
Query: 72 RGENVVLIGELD 83
RG +VLI D
Sbjct: 111 RGTIIVLISPAD 122
>gi|407461851|ref|YP_006773168.1| like-Sm ribonucleoprotein core [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045473|gb|AFS80226.1| like-Sm ribonucleoprotein core [Candidatus Nitrosopumilus
koreensis AR1]
Length = 75
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
+ST +A+ DK +L+ LR+ + + G L FD N LE A + V + D PLG +
Sbjct: 5 ISTLMANSKDKVVLLRLRNNKTIQGVLQDFDIHMNLTLENAED---VSEEKPD-PLGKVL 60
Query: 71 IRGENVVLIGELDLE 85
+RG+N++ I D E
Sbjct: 61 LRGDNILAISLPDEE 75
>gi|357494377|ref|XP_003617477.1| Small nuclear ribonucleoprotein-associated protein B [Medicago
truncatula]
gi|355518812|gb|AET00436.1| Small nuclear ribonucleoprotein-associated protein B [Medicago
truncatula]
Length = 394
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 12/77 (15%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE-----------RVIVGDL 60
S+ + Y++ ++ V ++DGR+L+G +FD+ N VL G CE + GD
Sbjct: 6 SSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVL-GDCEEFRKLPPAKGKKTTDGDR 64
Query: 61 YCDIPLGLYVIRGENVV 77
LGL ++RGE V+
Sbjct: 65 EDRRTLGLVLLRGEEVI 81
>gi|304323319|gb|ADM24796.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323321|gb|ADM24797.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323331|gb|ADM24802.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323333|gb|ADM24803.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323339|gb|ADM24806.1| putative small nuclear ribonucleoprotein [Sporidiobolus
johnsonii]
Length = 77
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 18 YLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL-YCDIP-----LGLYVI 71
Y+DKK+ V GR+++GTL +DQ N V++ E + D IP LGL V+
Sbjct: 1 YVDKKIRVKFTGGREVVGTLKGYDQLLNLVMDDLEETLRDPDTGLPSIPPATRSLGLAVL 60
Query: 72 RGENVVLIGELD 83
RG ++V++ LD
Sbjct: 61 RGTSLVVLSPLD 72
>gi|355751391|gb|EHH55646.1| hypothetical protein EGM_04892 [Macaca fascicularis]
Length = 76
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F V++ E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILRGFDPFMTLVIDECVEMATSGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 55 NN---IGMVVIRGNSIIMLEALE 74
>gi|258563080|ref|XP_002582285.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907792|gb|EEP82193.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 139
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI--PLGLYVI 71
L Y+DK++ V GR++ GTL +DQ N VL+ E ++ D D LGL V
Sbjct: 54 DLTKYMDKEVHVKFSGGREVTGTLKGYDQLMNLVLDDVKE-IMRDDEGNDSTRSLGLIVA 112
Query: 72 RGENVVLIGELD 83
RG +VLI +D
Sbjct: 113 RGTLLVLISPVD 124
>gi|226530574|ref|NP_001148733.1| LSM7-like [Zea mays]
gi|195621704|gb|ACG32682.1| LSM7-like [Zea mays]
gi|413919649|gb|AFW59581.1| LSM7-like protein [Zea mays]
Length = 156
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP-----LGLY 69
LA ++DK + V L GR++ GTL +DQ N VL+ A E D + LGL
Sbjct: 69 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVENEREQDDPLKLSGKTRQLGLI 128
Query: 70 VIRGENVVLIGELD 83
V RG V+L+ D
Sbjct: 129 VCRGTAVMLVSPTD 142
>gi|198427430|ref|XP_002130422.1| PREDICTED: similar to small nuclear ribonucleoprotein G [Ciona
intestinalis]
Length = 89
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P L ++DKKL + L GR + G L FD F N V++ + G +
Sbjct: 14 MSKAHP------PELKKFMDKKLDLKLNGGRSIQGILRGFDPFMNLVIDDGIGKRKDGSV 67
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ V+RG +V+++ +D
Sbjct: 68 E---KIGMVVVRGNSVLMMEAVD 87
>gi|218884605|ref|YP_002428987.1| Small nuclear ribonucleoprotein (snRNP)-like protein
[Desulfurococcus kamchatkensis 1221n]
gi|218766221|gb|ACL11620.1| Small nuclear ribonucleoprotein (snRNP) - like protein
[Desulfurococcus kamchatkensis 1221n]
Length = 75
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L L K +L+ +D L G L SFDQ N VL+ A E + G LG VIRG+
Sbjct: 9 LEENLGKHVLIKTKDNIPLRGKLRSFDQHLNIVLDDAEEILSNGSTR---KLGTIVIRGD 65
Query: 75 NVVLIGEL 82
VVLI L
Sbjct: 66 TVVLISPL 73
>gi|45190730|ref|NP_984984.1| AER125Cp [Ashbya gossypii ATCC 10895]
gi|44983709|gb|AAS52808.1| AER125Cp [Ashbya gossypii ATCC 10895]
gi|374108207|gb|AEY97114.1| FAER125Cp [Ashbya gossypii FDAG1]
Length = 83
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 19 LDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE---RVIVGDLYCDIPLGLYV-IRGE 74
LD+++ V LR RKL GTL +FD N VL A E ++I G+L + V +RG+
Sbjct: 13 LDERVYVKLRGARKLSGTLQAFDSHCNIVLSDAEETIYQLIDGELKSETKSSEMVFVRGD 72
Query: 75 NVVLI 79
+V L+
Sbjct: 73 SVTLV 77
>gi|390981169|pdb|4EMK|C Chain C, Crystal Structure Of Splsm567
Length = 113
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV---GDLYCDI-PLGLYV 70
L+ Y D+++ GR++ G L FDQ N VL+ E++ G L I LGL V
Sbjct: 28 LSRYQDQRIQATFTGGRQITGILKGFDQLXNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 87
Query: 71 IRGENVVLIGELD 83
+RG +VLI D
Sbjct: 88 VRGTTLVLIAPXD 100
>gi|426238536|ref|XP_004013207.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ovis aries]
Length = 76
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L D F N V++ E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILRGLDPFMNLVIDECVEMATSGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 55 NN---IGMVVIRGNSIIMLEALE 74
>gi|344250803|gb|EGW06907.1| Small nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 82
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 18 YLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVV 77
++DKKL + L GR + G L FD F N V++ E G +G+ VIRG +++
Sbjct: 18 FMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQ---QNNIGMVVIRGNSII 74
Query: 78 LIGELD 83
++ L+
Sbjct: 75 MLEALE 80
>gi|156088647|ref|XP_001611730.1| Sm domain containing protein [Babesia bovis]
gi|154798984|gb|EDO08162.1| Sm domain containing protein [Babesia bovis]
Length = 159
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE--RVIVG------DLYCD 63
+T + +L ++ V ++DGRK +GT +FD+ N VL CE R+ G +
Sbjct: 5 NTRMQQWLQYRVRVAIKDGRKFVGTFIAFDKHMNLVLA-DCEEFRITKGKGPDKQKVELK 63
Query: 64 IPLGLYVIRGENVV 77
LG ++RGEN+V
Sbjct: 64 RTLGFIMLRGENIV 77
>gi|71006012|ref|XP_757672.1| hypothetical protein UM01525.1 [Ustilago maydis 521]
gi|46097347|gb|EAK82580.1| hypothetical protein UM01525.1 [Ustilago maydis 521]
Length = 134
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERV 55
L +LDK++ V ++ GRK+ GTL FD F N V++ A E+V
Sbjct: 56 LKRFLDKRIAVNIQGGRKIQGTLRGFDMFLNLVVDEAIEQV 96
>gi|12859584|dbj|BAB31701.1| unnamed protein product [Mus musculus]
Length = 70
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
Query: 69 YVIRGENVVLIGELDLERDELPPHLTHVSVAEI 101
+V+RGENVVL+GE+DLE++ P L VS+ EI
Sbjct: 1 FVVRGENVVLLGEIDLEKESDTP-LQQVSIEEI 32
>gi|348540852|ref|XP_003457901.1| PREDICTED: small nuclear ribonucleoprotein G-like [Oreochromis
niloticus]
Length = 76
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N V++ E G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDCLEMGPGGQQ 54
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 55 NT---IGMVVIRGNSIIMLEALE 74
>gi|297814702|ref|XP_002875234.1| hypothetical protein ARALYDRAFT_484298 [Arabidopsis lyrata subsp.
lyrata]
gi|297321072|gb|EFH51493.1| hypothetical protein ARALYDRAFT_484298 [Arabidopsis lyrata subsp.
lyrata]
Length = 99
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP-----LGL 68
LA ++DK + V L GR++ GTL +DQ N VL+ A E V D LGL
Sbjct: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFVRDHDDPLKTTDQTRRLGL 69
Query: 69 YVIRGENVVLIGELD 83
V RG V+L+ D
Sbjct: 70 IVCRGTAVMLVSPTD 84
>gi|440583672|emb|CCH47178.1| similar to small nuclear ribonucleoprotein G-like [Lupinus
angustifolius]
Length = 88
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 2 SWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLY 61
+ GPD V L L + + L R ++GTL FDQF N V++ E + G+
Sbjct: 13 KFDGPDTVQLDHYLYT-------IKLNANRMIVGTLRGFDQFMNLVVDNTVE--VNGNEK 63
Query: 62 CDIPLGLYVIRGENVVLIGELD 83
DI G+ VIRG +VV + L+
Sbjct: 64 TDI--GMVVIRGNSVVTVEALE 83
>gi|357166207|ref|XP_003580635.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Brachypodium distachyon]
Length = 100
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 13/78 (16%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP--------- 65
LA ++DK + V L GR++ GTL +DQ N VL+ A E + D P
Sbjct: 11 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVES----EREQDDPLKLSTKTRQ 66
Query: 66 LGLYVIRGENVVLIGELD 83
LGL V RG V+L+ D
Sbjct: 67 LGLIVCRGTAVMLVSPTD 84
>gi|156086694|ref|XP_001610756.1| LSM domain containing protein [Babesia bovis T2Bo]
gi|154798009|gb|EDO07188.1| LSM domain containing protein [Babesia bovis]
Length = 167
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 23 LLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVG--DLYCDIPLGLYVIRGENVVLIG 80
+ V LRD +G SFDQ+ N L + +VIV ++ D+ G +IRGE++
Sbjct: 30 IWVTLRDETSYVGIFKSFDQYGNIFLTDSVRKVIVQAEGVFSDVYNGNLIIRGESIAYFC 89
Query: 81 ELDLE 85
LD E
Sbjct: 90 SLDAE 94
>gi|219117519|ref|XP_002179554.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409445|gb|EEC49377.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 165
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE---------RVIVGDLYC 62
+ L Y++ +L V L DGR ++GT +FD+ N VL A E ++ +
Sbjct: 6 GSKLLRYVEHRLRVTLHDGRSIVGTFLAFDKHLNLVLSEAEEFRTLKSKGGAALLEERTE 65
Query: 63 DIPLGLYVIRGENVV 77
LGL +IRGENVV
Sbjct: 66 KRSLGLVLIRGENVV 80
>gi|162606100|ref|XP_001713565.1| small nucleolar ribonucleoprotein G [Guillardia theta]
gi|13794485|gb|AAK39860.1|AF165818_68 small nucleolar ribonucleoprotein G [Guillardia theta]
Length = 74
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 8 DVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLE 49
D+YL+ +++++ KK+ V+L + L GTL FD F+N V++
Sbjct: 3 DIYLNVEISNFIQKKVNVILINQINLKGTLVGFDNFSNIVIK 44
>gi|323347924|gb|EGA82184.1| Lsm8p [Saccharomyces cerevisiae Lalvin QA23]
gi|365764821|gb|EHN06341.1| Lsm8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 128
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
+S +L YL+K+++++ DG L+ +L FD+ N + R I + C L
Sbjct: 20 MSATLKDYLNKRVVIIKVDGECLIASLNGFDKNTNLFITNVFNR-ISKEFICKAQL---- 74
Query: 71 IRGENVVLIGELDLERDE 88
+RG + L+G +D E D+
Sbjct: 75 LRGSEIALVGLIDAENDD 92
>gi|315425372|dbj|BAJ47038.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
gi|315426552|dbj|BAJ48182.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
gi|315426610|dbj|BAJ48238.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
gi|343485302|dbj|BAJ50956.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
Length = 74
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L+ + +LV LR+G+ L G L +DQ N VLE E + D LG V+RG+
Sbjct: 10 LSKSVGSTVLVRLRNGKVLRGLLKGYDQHMNIVLEDTDELI---DENTQNKLGTIVVRGD 66
Query: 75 NVVLI 79
++V+I
Sbjct: 67 SIVMI 71
>gi|290771219|emb|CBK33747.1| Lsm8p [Saccharomyces cerevisiae EC1118]
Length = 109
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
+S +L YL+K+++++ DG L+ +L FD+ N + R I + C L
Sbjct: 1 MSATLKDYLNKRVVIIKVDGECLIASLNGFDKNTNLFITNVFNR-ISKEFICKAQL---- 55
Query: 71 IRGENVVLIGELDLERDE-LPP 91
+RG + L+G +D E D+ L P
Sbjct: 56 LRGSEIALVGLIDAENDDSLAP 77
>gi|387915654|gb|AFK11436.1| u6 snRNA-associated Sm-like protein LSm7-like protein
[Callorhinchus milii]
gi|392880576|gb|AFM89120.1| u6 snRNA-associated Sm-like protein LSm7-like protein
[Callorhinchus milii]
Length = 103
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD----LYCDI-PLGL 68
L+ Y+DK + V + GR+ G L FD N VL+G E V D L D LGL
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYVRDPDDQYKLTEDTRQLGL 73
Query: 69 YVIRGENVVLI 79
V RG +VVLI
Sbjct: 74 VVCRGTSVVLI 84
>gi|330827552|ref|XP_003291838.1| hypothetical protein DICPUDRAFT_39635 [Dictyostelium purpureum]
gi|325077961|gb|EGC31640.1| hypothetical protein DICPUDRAFT_39635 [Dictyostelium purpureum]
Length = 78
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
+ L LDKKL V L R + G L FD F N L+ E V + Y +G+ +
Sbjct: 7 IDPDLTRLLDKKLNVKLNGNRTVQGILRGFDTFMNIALKDTVEVVSPTEKY---EIGMVL 63
Query: 71 IRGENVVLIGELD 83
IRG +++L+ L+
Sbjct: 64 IRGNSIILMEPLE 76
>gi|148666746|gb|EDK99162.1| mCG130514, isoform CRA_b [Mus musculus]
Length = 99
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
+S SL ++DKKL + L GR + G L FD F N V++ E G +G+ V
Sbjct: 29 VSKSL-RFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQ---QNNIGMVV 84
Query: 71 IRGENVVLIGELD 83
IRG +++++ L+
Sbjct: 85 IRGNSIIMLEALE 97
>gi|403169358|ref|XP_003328805.2| small nuclear ribonucleoprotein [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167924|gb|EFP84386.2| small nuclear ribonucleoprotein [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 125
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE--RVIVGDLYCDIP----LG 67
LA + DK++ V GR++ G L +DQ N V++ E R G P LG
Sbjct: 37 DLAKFADKRVRVKFMGGREITGILKGYDQLLNLVMDEVEEILREPEGATVTSPPKTRSLG 96
Query: 68 LYVIRGENVVLIGELD 83
L VIRG ++V+I +D
Sbjct: 97 LAVIRGTSLVVINPVD 112
>gi|66811318|ref|XP_639367.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|74854860|sp|Q54RX0.1|RUXG_DICDI RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|60468000|gb|EAL66011.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 85
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Query: 2 SWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLY 61
A PD L LDKKL + L R + G L FD F N L+ E V + Y
Sbjct: 5 KQADPD-------LTKLLDKKLAIKLNGNRTVHGILRGFDTFMNIALKDTVEVVSPTEKY 57
Query: 62 CDIPLGLYVIRGENVVLIGELD 83
+G+ +IRG +++L+ L+
Sbjct: 58 ---EIGMVIIRGNSILLMEPLE 76
>gi|298706362|emb|CBJ29371.1| similar to U6 snRNA-associated Sm-like protein LSm8 isoform 2
[Ectocarpus siliculosus]
Length = 119
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 15/86 (17%)
Query: 34 MGTLCSFDQFANAVLEGACERV--------------IVGDLYCDIPLGLYVIRGENVVLI 79
G L +D N VLEG ER+ + + LGLY+ RG+N+ +I
Sbjct: 34 QGNLKGYDHTINLVLEGCKERIYSQSRGVEQARETGTYSSMVVQVQLGLYICRGDNIAVI 93
Query: 80 GELDLERDELPPHLTHVSVAEIKRVS 105
GE+D E ++ L+ + +K V+
Sbjct: 94 GEVD-EVEDASKDLSRIRAEPLKPVT 118
>gi|432112555|gb|ELK35271.1| Small nuclear ribonucleoprotein G [Myotis davidii]
Length = 76
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N V++ C + G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVID-ECVEMATGGQ 53
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+I G+ I+G +++++ L+
Sbjct: 54 QNNI--GMVAIQGNSIIMLEALE 74
>gi|37362670|ref|NP_012556.2| Lsm8p [Saccharomyces cerevisiae S288c]
gi|115502413|sp|P47093.2|LSM8_YEAST RecName: Full=U6 snRNA-associated Sm-like protein LSm8
gi|151945097|gb|EDN63348.1| snRNP protein [Saccharomyces cerevisiae YJM789]
gi|190409506|gb|EDV12771.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|256269531|gb|EEU04816.1| Lsm8p [Saccharomyces cerevisiae JAY291]
gi|285812914|tpg|DAA08812.1| TPA: Lsm8p [Saccharomyces cerevisiae S288c]
gi|349579213|dbj|GAA24376.1| K7_Lsm8p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 109
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
+S +L YL+K+++++ DG L+ +L FD+ N + R I + C L
Sbjct: 1 MSATLKDYLNKRVVIIKVDGECLIASLNGFDKNTNLFITNVFNR-ISKEFICKAQL---- 55
Query: 71 IRGENVVLIGELDLERDE-LPP 91
+RG + L+G +D E D+ L P
Sbjct: 56 LRGSEIALVGLIDAENDDSLAP 77
>gi|350535404|ref|NP_001232194.1| putative small nuclear ribonucleoprotein polypeptide G
[Taeniopygia guttata]
gi|197127873|gb|ACH44371.1| putative small nuclear ribonucleoprotein polypeptide G
[Taeniopygia guttata]
Length = 74
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
MS A P + L ++DKKL + L GR + G L FD F N V++ E I G
Sbjct: 1 MSKAHPPE------LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--ICGQQ 52
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
+G+ VIRG +++++ L+
Sbjct: 53 N---NIGMVVIRGNSIIMLEALE 72
>gi|385805901|ref|YP_005842299.1| putative snRNP Sm protein [Fervidicoccus fontis Kam940]
gi|383795764|gb|AFH42847.1| putative snRNP Sm protein [Fervidicoccus fontis Kam940]
Length = 76
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L+S + + +LV L+ +++ G L S+D N VLE A E G LG +IRG+
Sbjct: 9 LSSSMGQTVLVKLKGNKEVRGKLKSYDHHLNIVLEDAEELFPDGQAR---KLGTVIIRGD 65
Query: 75 NVVLI 79
NV++I
Sbjct: 66 NVIII 70
>gi|254583570|ref|XP_002497353.1| ZYRO0F03564p [Zygosaccharomyces rouxii]
gi|238940246|emb|CAR28420.1| ZYRO0F03564p [Zygosaccharomyces rouxii]
Length = 76
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLG-LYV 70
+ L Y+DKK+L+ L RK+ G L +D F N VL+ A E VG LG V
Sbjct: 4 TPELKRYVDKKVLLQLNGARKVAGVLRGYDLFLNVVLDDAVE---VGKDGSHHNLGSQSV 60
Query: 71 IRGENVVLIGELD 83
+RG ++V + LD
Sbjct: 61 VRGNSIVSLEALD 73
>gi|358393465|gb|EHK42866.1| hypothetical protein TRIATDRAFT_300894 [Trichoderma atroviride IMI
206040]
Length = 139
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE--RVIVGDLYCDIPLGLYVI 71
LA Y+DK ++V GR++ GTL +D N VL+ E R G+ LGL V+
Sbjct: 54 DLAKYMDKAIIVKFNGGREVRGTLKGYDALMNLVLDEVQETLRDDQGNETT-RSLGLVVV 112
Query: 72 RGENVVLIGELD 83
RG +VLI D
Sbjct: 113 RGTLLVLISPAD 124
>gi|854596|emb|CAA60945.1| ORF YJR83.16 [Saccharomyces cerevisiae]
gi|1015660|emb|CAA89547.1| unnamed protein product [Saccharomyces cerevisiae]
gi|323304353|gb|EGA58126.1| Lsm8p [Saccharomyces cerevisiae FostersB]
gi|323336933|gb|EGA78190.1| Lsm8p [Saccharomyces cerevisiae Vin13]
gi|392298452|gb|EIW09549.1| Lsm8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 128
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
+S +L YL+K+++++ DG L+ +L FD+ N + R I + C L
Sbjct: 20 MSATLKDYLNKRVVIIKVDGECLIASLNGFDKNTNLFITNVFNR-ISKEFICKAQL---- 74
Query: 71 IRGENVVLIGELDLERDE 88
+RG + L+G +D E D+
Sbjct: 75 LRGSEIALVGLIDAENDD 92
>gi|149238445|ref|XP_001525099.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451696|gb|EDK45952.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 96
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 19 LDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGD--------LYCDIPLGLYV 70
L +++ V+ D R GTL FD+ N +L + ER+I +I G+ V
Sbjct: 2 LGEQVAVITTDARYFEGTLEGFDKSTNIILSKSIERIIYSKEDQENNNEENEEIESGVNV 61
Query: 71 IRGENVVLIGELDLERDELPPHLTHV 96
+RG +V IGE+D + L P+ V
Sbjct: 62 MRGNEIVCIGEID---ESLSPNWAQV 84
>gi|363748022|ref|XP_003644229.1| hypothetical protein Ecym_1162 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887861|gb|AET37412.1| hypothetical protein Ecym_1162 [Eremothecium cymbalariae
DBVPG#7215]
Length = 83
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 19 LDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERV---IVGDLYCDIPLGLYV-IRGE 74
LD+K+ V LR RKL GTL +FD N VL A E + + G+L + + +RG+
Sbjct: 13 LDEKVYVKLRGARKLTGTLQAFDSHCNIVLSDAEETIYELVDGNLRFETKTSEMIFVRGD 72
Query: 75 NVVLI 79
+V L+
Sbjct: 73 SVTLV 77
>gi|340344088|ref|ZP_08667220.1| Like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519229|gb|EGP92952.1| Like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 78
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
L +++ +L+ L+ G+ + G L FDQ N +L+ + E G+ LG V+RG+
Sbjct: 10 LDESINQIVLIKLKGGKTIRGNLLGFDQHMNLLLDSSEEIPTEGNSKS---LGTIVVRGD 66
Query: 75 NVVLI 79
NVV+I
Sbjct: 67 NVVMI 71
>gi|242077336|ref|XP_002448604.1| hypothetical protein SORBIDRAFT_06g029950 [Sorghum bicolor]
gi|241939787|gb|EES12932.1| hypothetical protein SORBIDRAFT_06g029950 [Sorghum bicolor]
Length = 98
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 13/78 (16%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIP--------- 65
LA ++DK + V L GR++ GTL +DQ N VL+ A E + D P
Sbjct: 11 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVES----EREQDDPLKLSGKTRQ 66
Query: 66 LGLYVIRGENVVLIGELD 83
LGL V RG V+L+ D
Sbjct: 67 LGLIVCRGTAVMLVSPTD 84
>gi|114577940|ref|XP_001142444.1| PREDICTED: small nuclear ribonucleoprotein G isoform 3 [Pan
troglodytes]
Length = 85
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 18 YLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVV 77
++DKKL + L GR + G L FD F N V++ E G +G+ VIRG +++
Sbjct: 21 FMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQN---NIGMVVIRGNSII 77
Query: 78 LIGELD 83
++ L+
Sbjct: 78 MLEALE 83
>gi|397521832|ref|XP_003830990.1| PREDICTED: small nuclear ribonucleoprotein G [Pan paniscus]
Length = 85
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 18 YLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVV 77
++DKKL + L GR + G L FD F N V++ E G +G+ VIRG +++
Sbjct: 21 FMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQN---NIGMVVIRGNSII 77
Query: 78 LIGELD 83
++ L+
Sbjct: 78 MLEALE 83
>gi|353234457|emb|CCA66482.1| related to snRNP protein [Piriformospora indica DSM 11827]
Length = 158
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-PLGLYVIRG 73
L+ Y+ K+ V GR++ G L FDQ N VL+ E+ V +L + LGL V+RG
Sbjct: 79 LSKYVGSKVRVTFTGGRQVTGILKGFDQLLNLVLDQVEEQ--VSELQQNPRQLGLAVVRG 136
Query: 74 ENVVLIGELD 83
V LI D
Sbjct: 137 PTVTLIAPDD 146
>gi|320592255|gb|EFX04694.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 81
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 23/81 (28%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIV----GDLYCDIPL 66
+S L Y++KK+LVL VL+ A ERVI + ++PL
Sbjct: 1 MSALLYGYVEKKVLVL-------------------TVLQSAIERVINTPDDAEPSAEVPL 41
Query: 67 GLYVIRGENVVLIGELDLERD 87
GLY++RG+NV +G +D E D
Sbjct: 42 GLYIVRGDNVCSVGLVDEELD 62
>gi|299117056|emb|CBN73827.1| small nuclear ribonucleoprotein polypeptide G [Ectocarpus
siliculosus]
Length = 75
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Query: 1 MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60
M+ GPD L Y+DK L + L R + G L +D F N VL+ +
Sbjct: 1 MAKGGPD-------LKRYMDKTLSLKLNGNRTVKGVLRGYDPFMNLVLDETTDPA----- 48
Query: 61 YCDIPLGLYVIRGENVVLIGELD 83
D +G+ +IRG +VV LD
Sbjct: 49 SSDKKMGMVIIRGNSVVQFEILD 71
>gi|443926894|gb|ELU45444.1| LSM domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 306
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLG 67
L ++DK+L + L+ GRK+ G L FD F N V++ A E + + + P+G
Sbjct: 9 LKKFMDKRLFIHLQGGRKISGVLRGFDIFLNLVVDDAVEETVPAEKH---PIG 58
>gi|71030572|ref|XP_764928.1| small nuclear ribonucleoprotein B [Theileria parva strain Muguga]
gi|68351884|gb|EAN32645.1| small nuclear ribonucleoprotein B, putative [Theileria parva]
Length = 155
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 12 STSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE--RVIVGD----LYCDIP 65
+T + +L + V L+D RK +GTL ++D++ N VL CE R+ +G
Sbjct: 5 NTRMQHWLQYNVRVTLKDNRKFVGTLVAYDKYMNLVLS-DCEEFRMTLGKDKNRTEVKRT 63
Query: 66 LGLYVIRGENVV 77
LG ++RGEN+V
Sbjct: 64 LGFVLLRGENIV 75
>gi|294657422|ref|XP_459729.2| DEHA2E09724p [Debaryomyces hansenii CBS767]
gi|199432680|emb|CAG87965.2| DEHA2E09724p [Debaryomyces hansenii CBS767]
Length = 122
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERV-------IVGDLYCDIPL 66
L +Y DK++ V GR+++G L FDQ N VLE E + ++ D DI
Sbjct: 34 DLNNYKDKQIRVKFIGGRQVIGVLKGFDQLMNLVLEDVKENIRDPEDDNVLTDKTRDI-- 91
Query: 67 GLYVIRGENVVLIGELD 83
G V+RG +++ I +D
Sbjct: 92 GFVVVRGPSLLTISPVD 108
>gi|321263328|ref|XP_003196382.1| hypothetical protein CGB_J0080C [Cryptococcus gattii WM276]
gi|317462858|gb|ADV24595.1| hypothetical protein CNJ03360 [Cryptococcus gattii WM276]
Length = 66
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 19 LDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVL 78
+D++L + L+ GR++ G L +D F N V++ A E + G P G+ VIRG +V
Sbjct: 1 MDRRLFLHLQGGRQVSGVLRGYDMFLNLVVDNAFEELGGGQRK---PCGMVVIRGNSVSA 57
Query: 79 IGELDLER 86
+ LD +R
Sbjct: 58 MELLDNQR 65
>gi|323308450|gb|EGA61695.1| Lsm8p [Saccharomyces cerevisiae FostersO]
Length = 114
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 11 LSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYV 70
+S +L YL+K+++++ DG L+ +L FD+ N + R I + C L
Sbjct: 20 MSATLKDYLNKRVVIIKVDGECLIASLNGFDKNTNLFITNVFNR-ISKEFICKAQL---- 74
Query: 71 IRGENVVLIGELDLERDE 88
+RG + L+G +D E D+
Sbjct: 75 LRGSEIALVGLIDAENDD 92
>gi|324541578|gb|ADY49622.1| U6 snRNA-associated Sm-like protein LSm7 [Ascaris suum]
Length = 101
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-----PLGLY 69
L+ ++DKK+ V + GR+ G L +D N VL+ A E V + I PLGL
Sbjct: 18 LSRFIDKKIRVKFQGGREASGILKGYDALINLVLDNAVEYVRDSEDPQKITEETRPLGLI 77
Query: 70 VIRGENVVLIGELD 83
V RG + ++ D
Sbjct: 78 VARGTAITVVAPND 91
>gi|219884693|gb|ACL52721.1| unknown [Zea mays]
gi|413955445|gb|AFW88094.1| hypothetical protein ZEAMMB73_159101 [Zea mays]
Length = 74
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 25 VLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELD 83
V L R ++GTL FDQF N V++ E + G+ DI G+ VIRG +VV+I L+
Sbjct: 14 VKLNANRVVIGTLRGFDQFMNLVIDNTVE--VNGNDKTDI--GMVVIRGNSVVMIEALE 68
>gi|84994586|ref|XP_952015.1| small nuclear ribonucleoprotein [Theileria annulata strain
Ankara]
gi|65302176|emb|CAI74283.1| small nuclear ribonucleoprotein, putative [Theileria annulata]
Length = 82
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 4 AGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCD 63
AG + L +++K+L V L R ++G L +D F N VL+ A E +VG+ D
Sbjct: 2 AGDSKPSGNADLRRFMEKRLDVHLNGSRHVVGVLRGYDTFMNIVLDNALE--VVGEEQVD 59
Query: 64 IPLGLYVIRGENV 76
LG+ V+RG ++
Sbjct: 60 --LGVVVVRGNSI 70
>gi|71420900|ref|XP_811645.1| U6 snRNA-associated Sm-like protein LSm8 [Trypanosoma cruzi
strain CL Brener]
gi|70876330|gb|EAN89794.1| U6 snRNA-associated Sm-like protein LSm8, putative [Trypanosoma
cruzi]
Length = 127
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 25/94 (26%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVI------------------ 56
L YL +++ V+ DGR L+G L + DQ N VL ERV
Sbjct: 2 LTHYLRRRVSVITTDGRYLVGVLHAADQLLNVVLTSCVERVFDEARENAGGSREQKENQP 61
Query: 57 -------VGDLYCDIPLGLYVIRGENVVLIGELD 83
G ++P+G+ +IRG +VV + +D
Sbjct: 62 MSSNDNSSGGRMQELPMGVMMIRGSDVVCVAAVD 95
>gi|255941628|ref|XP_002561583.1| Pc16g12840 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586206|emb|CAP93954.1| Pc16g12840 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 125
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE--RVIVGDLYCDIPLGLYVIR 72
L Y+DK++ V GR++ GTL +DQ N VL+ E R G+ +GL V R
Sbjct: 42 LNKYMDKEVQVKFSGGREVTGTLKGYDQLMNLVLDEVKETMRDEEGNTTTR-SMGLIVAR 100
Query: 73 GENVVLIGELD 83
G +VLI D
Sbjct: 101 GTLIVLISPAD 111
>gi|156085737|ref|XP_001610278.1| small nuclear ribonucleoprotein G [Babesia bovis T2Bo]
gi|154797530|gb|EDO06710.1| small nuclear ribonucleoprotein G, putative [Babesia bovis]
Length = 80
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 2 SWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLY 61
S GPD L Y++K+L V L R ++G L +D F N VL+ A + I GD
Sbjct: 5 SIGGPD-------LRRYMEKRLDVHLTGSRHVVGVLRGYDTFMNVVLDNALQ--IEGDEQ 55
Query: 62 CDIPLGLYVIRGENVV 77
LG+ VIRG +V
Sbjct: 56 T--RLGMVVIRGNAIV 69
>gi|47225688|emb|CAG08031.1| unnamed protein product [Tetraodon nigroviridis]
Length = 102
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDI-----PLGL 68
L+ Y+DK + V + GR+ G L FD N VL+G E + D + LGL
Sbjct: 14 DLSKYIDKHIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQMKLTEDTRQLGL 73
Query: 69 YVIRGENVVLI 79
V RG +VVLI
Sbjct: 74 VVCRGTSVVLI 84
>gi|85000769|ref|XP_955103.1| U6 snRNA-associated Sm-like potein [Theileria annulata strain
Ankara]
gi|65303249|emb|CAI75627.1| U6 snRNA-associated Sm-like potein, putative [Theileria annulata]
Length = 113
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 29 DGRKLMGTLCSFDQFANAVLEGACERVIVGDLYC-DIPLGLYVIRGENV 76
DGR +G L FDQ N VL ERV D ++ LG+Y++RG+N+
Sbjct: 26 DGRVFVGVLKGFDQLTNLVLYNCLERVYHPDAPVEELELGIYLLRGDNM 74
>gi|164661255|ref|XP_001731750.1| hypothetical protein MGL_1018 [Malassezia globosa CBS 7966]
gi|159105651|gb|EDP44536.1| hypothetical protein MGL_1018 [Malassezia globosa CBS 7966]
Length = 130
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 14 SLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACE-------RVIVGDLYCDIPL 66
+LA Y+DK++ V GR+++GTL +DQ V++ E G+ L
Sbjct: 44 NLAKYVDKEIRVKFMGGREVVGTLKGYDQLMTLVMDDVEEIKHDPSNGNTTGERRT---L 100
Query: 67 GLYVIRGENVVLIGELD 83
GL V+RG N+ LI +D
Sbjct: 101 GLAVLRGTNLTLISPVD 117
>gi|15897658|ref|NP_342263.1| small nuclear riboprotein (snRNP-2) [Sulfolobus solfataricus P2]
gi|13813927|gb|AAK41053.1| Small nuclear riboprotein protein (snRNP-2) [Sulfolobus
solfataricus P2]
Length = 79
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 15 LASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
LA L+ +LV L+ +++ G L S+DQ N VL + E I D LG VIRG+
Sbjct: 12 LAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEE--IQSD-GSGKKLGTIVIRGD 68
Query: 75 NVVLIGEL 82
NV+LI L
Sbjct: 69 NVILISPL 76
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.330 0.146 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,223,494,161
Number of Sequences: 23463169
Number of extensions: 82693002
Number of successful extensions: 212821
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 615
Number of HSP's that attempted gapping in prelim test: 211265
Number of HSP's gapped (non-prelim): 1466
length of query: 147
length of database: 8,064,228,071
effective HSP length: 110
effective length of query: 37
effective length of database: 9,778,246,777
effective search space: 361795130749
effective search space used: 361795130749
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 71 (32.0 bits)