Query 032110
Match_columns 147
No_of_seqs 218 out of 1980
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 09:43:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032110.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/032110hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0300 DltE Short-chain dehyd 99.4 5.1E-13 1.1E-17 105.0 9.2 69 77-145 3-71 (265)
2 COG4221 Short-chain alcohol de 99.3 5.3E-12 1.1E-16 97.6 7.2 65 77-144 3-67 (246)
3 KOG1205 Predicted dehydrogenas 99.3 4.3E-12 9.4E-17 100.5 6.5 72 74-145 6-78 (282)
4 PRK08339 short chain dehydroge 99.3 1.2E-11 2.6E-16 96.3 8.5 70 76-145 4-73 (263)
5 PRK05854 short chain dehydroge 99.3 2.1E-11 4.6E-16 97.5 8.8 70 75-144 9-79 (313)
6 KOG0725 Reductases with broad 99.2 5.1E-11 1.1E-15 94.1 8.6 70 75-144 3-74 (270)
7 KOG1208 Dehydrogenases with di 99.2 6.6E-11 1.4E-15 95.3 8.1 72 74-145 29-101 (314)
8 PRK07062 short chain dehydroge 99.2 8.9E-11 1.9E-15 90.9 8.5 70 76-145 4-74 (265)
9 PRK07063 short chain dehydroge 99.2 1.3E-10 2.9E-15 89.6 8.5 69 77-145 4-73 (260)
10 KOG1014 17 beta-hydroxysteroid 99.2 1.6E-10 3.4E-15 92.1 8.9 64 80-143 49-112 (312)
11 PRK08416 7-alpha-hydroxysteroi 99.2 1.3E-10 2.8E-15 90.1 8.2 70 75-144 3-73 (260)
12 PRK05867 short chain dehydroge 99.2 1.3E-10 2.9E-15 89.4 8.2 68 76-144 5-72 (253)
13 PRK08862 short chain dehydroge 99.1 1.5E-10 3.2E-15 88.8 7.8 68 77-145 2-69 (227)
14 PRK08303 short chain dehydroge 99.1 1.6E-10 3.4E-15 92.4 8.2 69 76-145 4-82 (305)
15 PRK07478 short chain dehydroge 99.1 1.8E-10 3.8E-15 88.7 8.2 68 76-144 2-69 (254)
16 PRK05876 short chain dehydroge 99.1 1.8E-10 4E-15 90.4 8.4 68 77-145 3-70 (275)
17 PRK06197 short chain dehydroge 99.1 2.8E-10 6E-15 90.3 9.3 71 74-144 10-81 (306)
18 PRK06139 short chain dehydroge 99.1 2.2E-10 4.9E-15 92.6 8.4 69 76-145 3-71 (330)
19 PRK05866 short chain dehydroge 99.1 3.8E-10 8.3E-15 89.5 9.6 69 75-144 35-103 (293)
20 PRK07533 enoyl-(acyl carrier p 99.1 2.4E-10 5.2E-15 88.7 8.2 71 73-145 3-75 (258)
21 PRK06125 short chain dehydroge 99.1 3.2E-10 6.9E-15 87.6 8.6 69 77-145 4-72 (259)
22 KOG1201 Hydroxysteroid 17-beta 99.1 1.7E-10 3.8E-15 91.5 6.8 70 74-145 32-101 (300)
23 PRK08085 gluconate 5-dehydroge 99.1 3.7E-10 8E-15 86.9 8.5 69 75-144 4-72 (254)
24 PRK06194 hypothetical protein; 99.1 3.6E-10 7.8E-15 88.4 8.3 67 77-144 3-69 (287)
25 PRK08265 short chain dehydroge 99.1 3.5E-10 7.5E-15 87.8 8.1 64 77-144 3-66 (261)
26 PRK07523 gluconate 5-dehydroge 99.1 4.5E-10 9.8E-15 86.4 8.7 68 76-144 6-73 (255)
27 PRK08589 short chain dehydroge 99.1 4.3E-10 9.4E-15 87.8 8.5 67 77-145 3-69 (272)
28 PRK07109 short chain dehydroge 99.1 4.5E-10 9.8E-15 90.7 8.6 69 76-145 4-72 (334)
29 PRK06603 enoyl-(acyl carrier p 99.1 3.8E-10 8.2E-15 87.8 7.7 67 77-145 5-73 (260)
30 PRK05872 short chain dehydroge 99.1 3.8E-10 8.3E-15 89.4 7.8 68 75-144 4-71 (296)
31 PRK07035 short chain dehydroge 99.1 6.5E-10 1.4E-14 85.3 8.8 69 76-145 4-72 (252)
32 PRK09186 flagellin modificatio 99.1 4.5E-10 9.8E-15 86.2 7.8 68 78-145 2-70 (256)
33 PLN02253 xanthoxin dehydrogena 99.1 6.1E-10 1.3E-14 86.9 8.2 68 75-144 13-80 (280)
34 PRK08415 enoyl-(acyl carrier p 99.1 5.4E-10 1.2E-14 87.9 7.9 67 77-145 2-70 (274)
35 PRK09242 tropinone reductase; 99.1 8.3E-10 1.8E-14 85.1 8.8 71 74-144 3-74 (257)
36 PRK06720 hypothetical protein; 99.1 8E-10 1.7E-14 81.6 8.3 68 76-144 12-79 (169)
37 PRK06124 gluconate 5-dehydroge 99.1 8.1E-10 1.8E-14 85.0 8.6 71 74-145 5-75 (256)
38 PRK07791 short chain dehydroge 99.1 6.3E-10 1.4E-14 87.8 8.1 68 77-145 3-79 (286)
39 PRK07904 short chain dehydroge 99.1 6.1E-10 1.3E-14 86.3 7.9 66 79-144 7-74 (253)
40 PRK06172 short chain dehydroge 99.1 8E-10 1.7E-14 84.9 8.4 68 76-144 3-70 (253)
41 PRK07890 short chain dehydroge 99.1 7.6E-10 1.7E-14 85.0 8.3 67 77-144 2-68 (258)
42 PRK07576 short chain dehydroge 99.1 8.1E-10 1.8E-14 85.9 8.5 69 75-144 4-72 (264)
43 PRK06114 short chain dehydroge 99.1 9.2E-10 2E-14 84.9 8.6 70 75-145 3-73 (254)
44 PRK06505 enoyl-(acyl carrier p 99.1 6.3E-10 1.4E-14 87.2 7.7 67 77-145 4-72 (271)
45 PLN02780 ketoreductase/ oxidor 99.0 1.1E-09 2.3E-14 88.2 9.1 63 79-141 52-115 (320)
46 PRK13394 3-hydroxybutyrate deh 99.0 9.8E-10 2.1E-14 84.5 8.5 67 77-144 4-70 (262)
47 PRK08277 D-mannonate oxidoredu 99.0 9.8E-10 2.1E-14 85.7 8.6 68 76-144 6-73 (278)
48 PRK05599 hypothetical protein; 99.0 6.9E-10 1.5E-14 85.6 7.6 64 81-145 1-64 (246)
49 PRK06200 2,3-dihydroxy-2,3-dih 99.0 8E-10 1.7E-14 85.5 7.8 63 77-143 3-65 (263)
50 PRK06079 enoyl-(acyl carrier p 99.0 6.1E-10 1.3E-14 86.2 7.1 66 76-145 3-70 (252)
51 PRK07984 enoyl-(acyl carrier p 99.0 6.7E-10 1.5E-14 86.8 7.4 66 78-145 4-71 (262)
52 PRK07097 gluconate 5-dehydroge 99.0 1.1E-09 2.3E-14 85.0 8.4 71 74-145 4-74 (265)
53 PRK07453 protochlorophyllide o 99.0 8.4E-10 1.8E-14 88.2 8.0 67 77-144 3-69 (322)
54 PRK09072 short chain dehydroge 99.0 1.1E-09 2.3E-14 84.8 8.2 66 77-144 2-67 (263)
55 PRK05717 oxidoreductase; Valid 99.0 1E-09 2.2E-14 84.6 7.9 66 74-143 4-69 (255)
56 PRK07102 short chain dehydroge 99.0 1.3E-09 2.8E-14 83.3 8.4 65 81-145 2-66 (243)
57 PRK06138 short chain dehydroge 99.0 1.3E-09 2.8E-14 83.3 8.1 66 77-144 2-67 (252)
58 PRK08690 enoyl-(acyl carrier p 99.0 1.1E-09 2.3E-14 85.3 7.6 67 77-145 3-71 (261)
59 PRK07231 fabG 3-ketoacyl-(acyl 99.0 1.3E-09 2.9E-14 83.1 8.0 67 77-145 2-68 (251)
60 PRK07814 short chain dehydroge 99.0 1.6E-09 3.5E-14 84.0 8.3 67 77-144 7-73 (263)
61 PRK07825 short chain dehydroge 99.0 1E-09 2.3E-14 85.3 7.2 63 77-144 2-64 (273)
62 PRK08594 enoyl-(acyl carrier p 99.0 1E-09 2.3E-14 85.2 7.2 69 76-145 3-74 (257)
63 PRK07774 short chain dehydroge 99.0 1.9E-09 4.1E-14 82.4 8.5 68 76-144 2-69 (250)
64 PRK12481 2-deoxy-D-gluconate 3 99.0 1.4E-09 3.1E-14 83.9 7.8 67 76-145 4-70 (251)
65 TIGR03325 BphB_TodD cis-2,3-di 99.0 1.2E-09 2.6E-14 84.6 7.3 62 77-142 2-63 (262)
66 PRK06196 oxidoreductase; Provi 99.0 1.3E-09 2.9E-14 86.9 7.6 63 76-143 22-84 (315)
67 PRK07067 sorbitol dehydrogenas 99.0 1.8E-09 3.8E-14 83.2 8.1 64 77-144 3-66 (257)
68 PRK06128 oxidoreductase; Provi 99.0 7.7E-09 1.7E-13 82.0 11.8 69 75-144 50-120 (300)
69 PRK06935 2-deoxy-D-gluconate 3 99.0 1.8E-09 4E-14 83.3 7.9 68 76-145 11-78 (258)
70 PRK06113 7-alpha-hydroxysteroi 99.0 2.2E-09 4.8E-14 82.7 8.3 68 76-144 7-74 (255)
71 PRK07831 short chain dehydroge 99.0 3.5E-09 7.6E-14 81.9 9.5 68 77-144 14-83 (262)
72 PRK08628 short chain dehydroge 99.0 1.8E-09 3.8E-14 83.2 7.6 67 76-144 3-69 (258)
73 PRK08251 short chain dehydroge 99.0 2.3E-09 5.1E-14 81.9 8.2 65 80-144 2-67 (248)
74 PRK07666 fabG 3-ketoacyl-(acyl 99.0 3E-09 6.6E-14 81.0 8.7 67 77-144 4-70 (239)
75 PRK07677 short chain dehydroge 99.0 2E-09 4.3E-14 82.8 7.7 65 80-145 1-65 (252)
76 PRK12429 3-hydroxybutyrate deh 99.0 2.5E-09 5.5E-14 81.9 8.2 66 78-144 2-67 (258)
77 PRK07370 enoyl-(acyl carrier p 99.0 1.8E-09 3.9E-14 83.9 7.3 68 77-145 3-74 (258)
78 PRK08159 enoyl-(acyl carrier p 99.0 1.8E-09 3.9E-14 84.7 7.3 67 77-145 7-75 (272)
79 PRK08703 short chain dehydroge 99.0 3.3E-09 7.2E-14 80.9 8.6 65 77-141 3-67 (239)
80 PRK07792 fabG 3-ketoacyl-(acyl 99.0 3.4E-09 7.3E-14 84.4 9.0 69 74-143 6-75 (306)
81 PRK12384 sorbitol-6-phosphate 99.0 2.6E-09 5.7E-14 82.2 8.1 65 80-144 2-67 (259)
82 PF00106 adh_short: short chai 99.0 2.3E-09 4.9E-14 77.2 7.0 64 81-145 1-67 (167)
83 PRK08213 gluconate 5-dehydroge 99.0 3.3E-09 7.2E-14 81.8 8.3 70 75-145 7-76 (259)
84 PRK06701 short chain dehydroge 99.0 8E-09 1.7E-13 81.7 10.6 69 75-144 41-110 (290)
85 PRK07889 enoyl-(acyl carrier p 99.0 1.9E-09 4.2E-14 83.6 6.8 64 77-144 4-71 (256)
86 PRK12939 short chain dehydroge 98.9 4E-09 8.6E-14 80.4 8.4 68 76-144 3-70 (250)
87 PRK12823 benD 1,6-dihydroxycyc 98.9 3.5E-09 7.6E-14 81.6 8.1 65 77-143 5-69 (260)
88 COG3967 DltE Short-chain dehyd 98.9 3.8E-09 8.2E-14 80.2 8.0 45 77-121 2-46 (245)
89 PRK06914 short chain dehydroge 98.9 3.4E-09 7.3E-14 82.6 7.9 68 78-145 1-69 (280)
90 PRK08278 short chain dehydroge 98.9 3.2E-09 6.9E-14 83.0 7.8 67 77-144 3-76 (273)
91 PRK08643 acetoin reductase; Va 98.9 3.9E-09 8.4E-14 81.2 8.1 64 80-144 2-65 (256)
92 PRK06949 short chain dehydroge 98.9 4.8E-09 1E-13 80.5 8.5 67 77-144 6-72 (258)
93 PRK12747 short chain dehydroge 98.9 4.8E-09 1E-13 80.6 8.0 65 78-143 2-67 (252)
94 PRK09135 pteridine reductase; 98.9 5.8E-09 1.2E-13 79.4 8.4 68 78-145 4-72 (249)
95 PRK07024 short chain dehydroge 98.9 2.5E-09 5.4E-14 82.6 6.4 63 80-144 2-64 (257)
96 PRK12826 3-ketoacyl-(acyl-carr 98.9 4.8E-09 1E-13 79.9 7.9 66 77-143 3-68 (251)
97 PRK05875 short chain dehydroge 98.9 5.7E-09 1.2E-13 81.2 8.4 68 77-144 4-72 (276)
98 PRK06500 short chain dehydroge 98.9 5.1E-09 1.1E-13 79.9 7.9 62 77-142 3-64 (249)
99 PRK08063 enoyl-(acyl carrier p 98.9 5.3E-09 1.2E-13 79.9 8.0 66 78-144 2-68 (250)
100 PRK08217 fabG 3-ketoacyl-(acyl 98.9 6E-09 1.3E-13 79.5 8.2 67 77-144 2-68 (253)
101 TIGR01289 LPOR light-dependent 98.9 4E-09 8.6E-14 84.4 7.5 65 79-144 2-67 (314)
102 PRK08936 glucose-1-dehydrogena 98.9 7.5E-09 1.6E-13 80.0 8.8 67 77-144 4-71 (261)
103 PRK07832 short chain dehydroge 98.9 4E-09 8.7E-14 82.1 7.3 64 81-144 1-64 (272)
104 PRK12746 short chain dehydroge 98.9 5.9E-09 1.3E-13 80.0 8.1 68 77-145 3-71 (254)
105 TIGR01832 kduD 2-deoxy-D-gluco 98.9 6.1E-09 1.3E-13 79.6 8.0 65 77-144 2-66 (248)
106 PRK08340 glucose-1-dehydrogena 98.9 3.8E-09 8.3E-14 81.6 7.0 61 82-144 2-62 (259)
107 TIGR03206 benzo_BadH 2-hydroxy 98.9 7.6E-09 1.6E-13 79.0 7.9 66 78-144 1-66 (250)
108 PRK07806 short chain dehydroge 98.9 9.3E-09 2E-13 78.6 8.3 67 77-144 3-70 (248)
109 PRK07326 short chain dehydroge 98.9 7.8E-09 1.7E-13 78.4 7.8 64 78-143 4-67 (237)
110 TIGR02685 pter_reduc_Leis pter 98.9 8.8E-09 1.9E-13 80.0 8.2 64 81-144 2-66 (267)
111 PRK12828 short chain dehydroge 98.9 7.5E-09 1.6E-13 78.2 7.4 65 76-143 3-67 (239)
112 PRK08226 short chain dehydroge 98.9 1E-08 2.2E-13 79.2 8.2 66 77-144 3-68 (263)
113 PLN02730 enoyl-[acyl-carrier-p 98.9 8.2E-09 1.8E-13 82.8 7.8 50 75-125 4-55 (303)
114 PRK06997 enoyl-(acyl carrier p 98.9 8.2E-09 1.8E-13 80.3 7.6 66 78-145 4-71 (260)
115 PRK05653 fabG 3-ketoacyl-(acyl 98.9 1.2E-08 2.6E-13 77.3 8.2 67 77-144 2-68 (246)
116 PRK07985 oxidoreductase; Provi 98.9 1.8E-08 3.9E-13 79.8 9.6 67 77-144 46-114 (294)
117 PRK06484 short chain dehydroge 98.9 1.3E-08 2.9E-13 86.0 9.2 64 77-144 266-329 (520)
118 PRK06198 short chain dehydroge 98.9 1E-08 2.3E-13 78.8 7.9 67 77-144 3-70 (260)
119 PRK07454 short chain dehydroge 98.9 1.3E-08 2.9E-13 77.5 8.3 65 79-144 5-69 (241)
120 PRK12937 short chain dehydroge 98.9 1.4E-08 3E-13 77.3 8.3 66 77-143 2-68 (245)
121 PRK07856 short chain dehydroge 98.9 7.1E-09 1.5E-13 79.7 6.8 64 76-139 2-84 (252)
122 TIGR01500 sepiapter_red sepiap 98.8 9.2E-09 2E-13 79.5 7.3 63 82-144 2-69 (256)
123 PRK05786 fabG 3-ketoacyl-(acyl 98.8 1.3E-08 2.8E-13 77.3 7.9 66 77-144 2-67 (238)
124 PRK06057 short chain dehydroge 98.8 6.4E-09 1.4E-13 80.1 6.4 44 78-121 5-48 (255)
125 PRK06101 short chain dehydroge 98.8 7.6E-09 1.6E-13 79.2 6.7 59 81-144 2-60 (240)
126 PRK08267 short chain dehydroge 98.8 9.3E-09 2E-13 79.3 7.2 61 81-144 2-62 (260)
127 TIGR02632 RhaD_aldol-ADH rhamn 98.8 1.3E-08 2.9E-13 89.4 9.0 70 76-145 410-480 (676)
128 KOG1200 Mitochondrial/plastidi 98.8 3.4E-09 7.4E-14 80.1 4.5 66 77-144 11-76 (256)
129 PRK08945 putative oxoacyl-(acy 98.8 1.8E-08 3.9E-13 77.2 8.5 64 77-140 9-72 (247)
130 PRK05565 fabG 3-ketoacyl-(acyl 98.8 1.6E-08 3.5E-13 76.8 8.2 67 77-144 2-69 (247)
131 PRK07201 short chain dehydroge 98.8 1.2E-08 2.6E-13 88.4 8.2 68 76-144 367-434 (657)
132 PRK05650 short chain dehydroge 98.8 1.3E-08 2.7E-13 79.2 7.5 63 81-144 1-63 (270)
133 PRK08993 2-deoxy-D-gluconate 3 98.8 1.6E-08 3.5E-13 77.9 8.0 66 75-143 5-70 (253)
134 PRK06484 short chain dehydroge 98.8 1.1E-08 2.4E-13 86.5 7.7 62 78-143 3-64 (520)
135 PRK12938 acetyacetyl-CoA reduc 98.8 1.4E-08 3.1E-13 77.5 7.6 66 78-144 1-67 (246)
136 PRK06398 aldose dehydrogenase; 98.8 2.9E-08 6.3E-13 76.9 9.4 64 77-140 3-82 (258)
137 PRK12743 oxidoreductase; Provi 98.8 2E-08 4.3E-13 77.5 8.1 64 80-144 2-66 (256)
138 PRK07775 short chain dehydroge 98.8 2.7E-08 5.9E-13 77.7 8.9 67 77-144 7-73 (274)
139 PRK12936 3-ketoacyl-(acyl-carr 98.8 2E-08 4.4E-13 76.3 8.0 63 77-143 3-65 (245)
140 PRK08642 fabG 3-ketoacyl-(acyl 98.8 1.8E-08 4E-13 77.0 7.7 63 77-143 2-65 (253)
141 PRK05855 short chain dehydroge 98.8 2E-08 4.4E-13 85.1 8.4 68 76-144 311-378 (582)
142 PRK06940 short chain dehydroge 98.8 1.9E-08 4.2E-13 78.8 7.6 63 80-145 2-64 (275)
143 PRK06182 short chain dehydroge 98.8 1.2E-08 2.6E-13 79.4 6.4 41 79-119 2-42 (273)
144 PRK06180 short chain dehydroge 98.8 1.8E-08 3.9E-13 78.7 7.4 61 79-143 3-63 (277)
145 PRK06841 short chain dehydroge 98.8 2.3E-08 4.9E-13 76.8 7.8 64 76-143 11-74 (255)
146 PRK08263 short chain dehydroge 98.8 1.8E-08 3.9E-13 78.6 7.3 62 79-144 2-63 (275)
147 PRK09291 short chain dehydroge 98.8 2.2E-08 4.7E-13 76.8 7.5 64 80-144 2-65 (257)
148 PRK05557 fabG 3-ketoacyl-(acyl 98.8 3.2E-08 7E-13 75.0 8.4 66 77-143 2-68 (248)
149 PRK12935 acetoacetyl-CoA reduc 98.8 3.4E-08 7.4E-13 75.4 8.5 67 77-144 3-70 (247)
150 PRK12859 3-ketoacyl-(acyl-carr 98.8 3.4E-08 7.4E-13 76.4 8.4 68 77-145 3-83 (256)
151 PRK12744 short chain dehydroge 98.8 3.1E-08 6.8E-13 76.4 8.1 67 77-144 5-75 (257)
152 PRK06181 short chain dehydroge 98.8 3E-08 6.5E-13 76.5 7.9 64 80-144 1-64 (263)
153 PRK12829 short chain dehydroge 98.8 2.1E-08 4.6E-13 77.1 7.0 66 76-144 7-72 (264)
154 PRK09134 short chain dehydroge 98.8 4.9E-08 1.1E-12 75.3 9.0 66 78-144 7-73 (258)
155 TIGR02415 23BDH acetoin reduct 98.8 3E-08 6.6E-13 75.9 7.7 63 81-144 1-63 (254)
156 KOG4169 15-hydroxyprostaglandi 98.8 1.3E-08 2.7E-13 78.4 5.4 67 76-143 1-68 (261)
157 PRK05993 short chain dehydroge 98.8 2E-08 4.3E-13 78.6 6.7 41 79-119 3-43 (277)
158 PRK06171 sorbitol-6-phosphate 98.8 6.2E-08 1.3E-12 74.9 9.3 65 76-140 5-87 (266)
159 PRK06463 fabG 3-ketoacyl-(acyl 98.8 2.4E-08 5.2E-13 76.9 6.9 39 76-114 3-41 (255)
160 PRK06523 short chain dehydroge 98.8 7E-08 1.5E-12 74.3 9.4 64 76-139 5-86 (260)
161 PRK07074 short chain dehydroge 98.8 3.2E-08 7E-13 76.1 7.5 62 80-144 2-63 (257)
162 PRK08264 short chain dehydroge 98.7 2.6E-08 5.5E-13 75.7 6.7 60 76-143 2-62 (238)
163 TIGR01963 PHB_DH 3-hydroxybuty 98.7 3.7E-08 8E-13 75.3 7.6 64 80-144 1-64 (255)
164 COG1028 FabG Dehydrogenases wi 98.7 3.4E-08 7.5E-13 75.6 7.3 66 77-143 2-71 (251)
165 PRK12745 3-ketoacyl-(acyl-carr 98.7 4.3E-08 9.2E-13 75.2 7.8 64 80-144 2-66 (256)
166 PLN03209 translocon at the inn 98.7 6.3E-08 1.4E-12 83.4 9.4 70 75-144 75-152 (576)
167 PRK06077 fabG 3-ketoacyl-(acyl 98.7 6.4E-08 1.4E-12 73.9 8.6 67 77-144 3-70 (252)
168 PRK06924 short chain dehydroge 98.7 3.6E-08 7.9E-13 75.4 6.9 61 81-145 2-63 (251)
169 PRK06483 dihydromonapterin red 98.7 3E-08 6.5E-13 75.4 6.3 37 80-116 2-38 (236)
170 PRK12825 fabG 3-ketoacyl-(acyl 98.7 7.5E-08 1.6E-12 72.9 8.4 67 77-144 3-70 (249)
171 PRK12827 short chain dehydroge 98.7 5.6E-08 1.2E-12 73.9 7.7 66 77-143 3-72 (249)
172 KOG1199 Short-chain alcohol de 98.7 2.4E-08 5.2E-13 74.4 5.4 64 78-145 7-70 (260)
173 PRK12748 3-ketoacyl-(acyl-carr 98.7 6.3E-08 1.4E-12 74.6 7.9 67 77-144 2-81 (256)
174 PRK12742 oxidoreductase; Provi 98.7 5E-08 1.1E-12 73.9 7.2 42 77-118 3-45 (237)
175 PRK12367 short chain dehydroge 98.7 2.9E-08 6.4E-13 77.0 5.8 39 76-114 10-48 (245)
176 PRK06123 short chain dehydroge 98.7 7.1E-08 1.5E-12 73.6 7.8 64 80-144 2-66 (248)
177 PRK07060 short chain dehydroge 98.7 6.5E-08 1.4E-12 73.6 7.5 45 76-120 5-49 (245)
178 PRK10538 malonic semialdehyde 98.7 6.6E-08 1.4E-12 74.2 7.2 58 82-143 2-59 (248)
179 PRK06947 glucose-1-dehydrogena 98.7 8.9E-08 1.9E-12 73.1 7.8 64 80-144 2-66 (248)
180 TIGR01829 AcAcCoA_reduct aceto 98.7 1E-07 2.3E-12 72.2 7.8 62 81-143 1-63 (242)
181 PRK06482 short chain dehydroge 98.7 7.7E-08 1.7E-12 74.9 7.3 60 80-143 2-61 (276)
182 PRK06179 short chain dehydroge 98.7 1.8E-07 3.8E-12 72.6 9.2 62 79-140 3-83 (270)
183 PRK09730 putative NAD(P)-bindi 98.7 9.2E-08 2E-12 72.7 7.4 63 81-144 2-65 (247)
184 PRK07069 short chain dehydroge 98.6 8.7E-08 1.9E-12 73.1 7.0 63 83-145 2-66 (251)
185 PRK08324 short chain dehydroge 98.6 8.3E-08 1.8E-12 84.4 7.8 66 77-144 419-484 (681)
186 PRK06300 enoyl-(acyl carrier p 98.6 2E-07 4.3E-12 74.7 9.0 38 75-112 3-42 (299)
187 PRK05884 short chain dehydroge 98.6 6.8E-08 1.5E-12 73.5 6.0 56 82-143 2-57 (223)
188 PLN00015 protochlorophyllide r 98.6 7.2E-08 1.6E-12 76.8 5.8 60 84-144 1-61 (308)
189 PRK05693 short chain dehydroge 98.6 8.7E-08 1.9E-12 74.6 6.0 38 81-118 2-39 (274)
190 PRK07424 bifunctional sterol d 98.6 1.3E-07 2.9E-12 78.7 7.3 44 76-119 174-217 (406)
191 PRK08220 2,3-dihydroxybenzoate 98.6 1.4E-07 3E-12 72.2 6.5 65 76-140 4-86 (252)
192 PRK07041 short chain dehydroge 98.6 1.3E-07 2.9E-12 71.4 6.1 59 84-144 1-59 (230)
193 TIGR01831 fabG_rel 3-oxoacyl-( 98.6 2.1E-07 4.6E-12 70.7 7.0 61 83-144 1-62 (239)
194 PRK12824 acetoacetyl-CoA reduc 98.6 2.7E-07 5.9E-12 70.0 7.4 62 81-143 3-65 (245)
195 PRK07023 short chain dehydroge 98.5 2E-07 4.4E-12 71.2 6.2 57 82-144 3-59 (243)
196 PLN02583 cinnamoyl-CoA reducta 98.5 3.4E-07 7.5E-12 72.6 7.7 67 77-144 3-71 (297)
197 PF13561 adh_short_C2: Enoyl-( 98.5 2.9E-07 6.4E-12 70.4 6.3 57 87-145 1-59 (241)
198 TIGR02622 CDP_4_6_dhtase CDP-g 98.5 2.8E-07 6.1E-12 74.4 6.4 64 78-143 2-65 (349)
199 PRK08177 short chain dehydroge 98.5 2.4E-07 5.2E-12 70.1 5.5 38 81-118 2-39 (225)
200 PRK06550 fabG 3-ketoacyl-(acyl 98.5 6.4E-07 1.4E-11 67.9 7.9 63 77-139 2-76 (235)
201 PLN02989 cinnamyl-alcohol dehy 98.5 4.3E-07 9.4E-12 72.3 7.2 67 79-145 4-71 (325)
202 TIGR03589 PseB UDP-N-acetylglu 98.5 3.9E-07 8.6E-12 73.2 6.5 64 78-144 2-67 (324)
203 PLN02986 cinnamyl-alcohol dehy 98.5 7.9E-07 1.7E-11 70.8 8.0 68 78-145 3-71 (322)
204 PRK08017 oxidoreductase; Provi 98.4 4E-07 8.7E-12 69.7 6.0 39 81-119 3-41 (256)
205 KOG1478 3-keto sterol reductas 98.4 7.6E-07 1.6E-11 69.9 7.2 63 79-141 2-72 (341)
206 COG0623 FabI Enoyl-[acyl-carri 98.4 9E-07 2E-11 68.3 7.5 69 76-146 2-72 (259)
207 PRK08219 short chain dehydroge 98.4 4.8E-07 1E-11 67.9 6.0 59 80-144 3-61 (227)
208 PRK06953 short chain dehydroge 98.4 5.6E-07 1.2E-11 68.0 6.3 56 81-143 2-57 (222)
209 PLN02657 3,8-divinyl protochlo 98.4 1.5E-06 3.3E-11 71.8 9.2 43 75-117 55-97 (390)
210 PLN02896 cinnamyl-alcohol dehy 98.4 8.4E-07 1.8E-11 71.8 7.3 63 79-143 9-71 (353)
211 TIGR01472 gmd GDP-mannose 4,6- 98.4 4E-07 8.8E-12 73.3 5.4 63 81-143 1-68 (343)
212 PLN02240 UDP-glucose 4-epimera 98.4 9.6E-07 2.1E-11 70.9 7.4 67 77-143 2-71 (352)
213 PF08659 KR: KR domain; Inter 98.4 1.2E-06 2.6E-11 65.0 7.1 63 82-145 2-68 (181)
214 TIGR01830 3oxo_ACP_reduc 3-oxo 98.4 1E-06 2.3E-11 66.5 6.8 61 83-144 1-62 (239)
215 PLN02214 cinnamoyl-CoA reducta 98.4 1.5E-06 3.2E-11 70.4 7.9 67 78-145 8-75 (342)
216 KOG1502 Flavonol reductase/cin 98.4 1E-06 2.2E-11 71.3 6.8 67 79-146 5-73 (327)
217 KOG1207 Diacetyl reductase/L-x 98.4 1.3E-06 2.8E-11 65.3 6.8 62 76-141 3-64 (245)
218 PRK13656 trans-2-enoyl-CoA red 98.4 1E-06 2.3E-11 72.8 6.8 67 78-145 39-118 (398)
219 KOG1209 1-Acyl dihydroxyaceton 98.4 8.2E-07 1.8E-11 68.2 5.6 41 80-120 7-48 (289)
220 PLN02662 cinnamyl-alcohol dehy 98.4 1.4E-06 3E-11 69.1 7.2 66 79-145 3-70 (322)
221 PRK07577 short chain dehydroge 98.4 4.2E-06 9.1E-11 63.2 9.5 61 79-140 2-78 (234)
222 PRK08261 fabG 3-ketoacyl-(acyl 98.3 1.4E-06 3.1E-11 72.7 7.2 37 77-113 207-243 (450)
223 smart00822 PKS_KR This enzymat 98.3 1.1E-06 2.5E-11 62.5 5.8 62 81-143 1-66 (180)
224 PLN02686 cinnamoyl-CoA reducta 98.3 2.2E-06 4.8E-11 70.1 8.0 68 76-144 49-121 (367)
225 PLN02572 UDP-sulfoquinovose sy 98.3 2.3E-06 5.1E-11 71.8 8.4 36 77-112 44-79 (442)
226 COG1086 Predicted nucleoside-d 98.3 2.2E-06 4.7E-11 73.5 7.5 68 77-144 247-316 (588)
227 PRK08309 short chain dehydroge 98.3 2.7E-06 5.8E-11 63.3 7.2 61 82-145 2-62 (177)
228 PLN02653 GDP-mannose 4,6-dehyd 98.3 1.1E-06 2.4E-11 70.6 5.2 39 77-115 3-41 (340)
229 PLN00198 anthocyanidin reducta 98.3 3.2E-06 6.8E-11 67.9 7.5 65 78-144 7-73 (338)
230 KOG1210 Predicted 3-ketosphing 98.3 2.1E-06 4.6E-11 68.9 5.9 61 81-141 34-95 (331)
231 PLN02650 dihydroflavonol-4-red 98.2 3.7E-06 8E-11 67.9 7.3 66 79-144 4-70 (351)
232 PRK12548 shikimate 5-dehydroge 98.2 4.5E-06 9.7E-11 66.5 7.4 52 77-129 123-178 (289)
233 KOG1611 Predicted short chain- 98.2 3.2E-06 7E-11 65.1 6.0 66 79-145 2-69 (249)
234 KOG1610 Corticosteroid 11-beta 98.2 3.5E-06 7.6E-11 67.6 6.3 67 76-145 25-91 (322)
235 cd01078 NAD_bind_H4MPT_DH NADP 98.2 1.6E-05 3.5E-10 59.4 9.2 51 77-127 25-75 (194)
236 PLN00141 Tic62-NAD(P)-related 98.2 6.8E-06 1.5E-10 63.4 7.4 59 78-141 15-73 (251)
237 TIGR02813 omega_3_PfaA polyket 98.2 4.6E-06 1E-10 82.0 7.8 36 78-113 1995-2031(2582)
238 PRK10675 UDP-galactose-4-epime 98.1 7.1E-06 1.5E-10 65.5 6.6 62 82-143 2-63 (338)
239 PF02719 Polysacc_synt_2: Poly 98.1 3.5E-06 7.6E-11 67.3 4.6 61 83-143 1-67 (293)
240 PRK15181 Vi polysaccharide bio 98.1 6.4E-06 1.4E-10 66.7 6.2 40 76-115 11-50 (348)
241 PF13460 NAD_binding_10: NADH( 98.1 1E-05 2.2E-10 59.1 6.2 52 83-143 1-52 (183)
242 PRK05579 bifunctional phosphop 98.1 2.1E-05 4.5E-10 65.5 8.4 66 76-141 184-278 (399)
243 PLN02427 UDP-apiose/xylose syn 98.0 1.1E-05 2.4E-10 66.0 6.0 40 78-117 12-52 (386)
244 PRK09009 C factor cell-cell si 97.9 1.5E-05 3.2E-10 60.4 5.0 34 81-114 1-36 (235)
245 PRK07578 short chain dehydroge 97.9 3.9E-05 8.5E-10 56.9 6.4 58 82-140 2-65 (199)
246 PRK14982 acyl-ACP reductase; P 97.8 9.3E-05 2E-09 60.4 8.3 64 77-140 152-225 (340)
247 KOG1371 UDP-glucose 4-epimeras 97.8 3.5E-05 7.5E-10 62.3 5.6 64 80-143 2-67 (343)
248 CHL00194 ycf39 Ycf39; Provisio 97.8 4.6E-05 1E-09 60.8 6.4 36 82-117 2-37 (317)
249 PRK10217 dTDP-glucose 4,6-dehy 97.8 2.4E-05 5.2E-10 63.0 4.6 33 81-113 2-35 (355)
250 PF01488 Shikimate_DH: Shikima 97.8 0.00011 2.4E-09 52.1 6.9 47 77-124 9-56 (135)
251 TIGR03466 HpnA hopanoid-associ 97.8 2.7E-05 5.8E-10 61.5 3.9 35 82-116 2-36 (328)
252 TIGR01746 Thioester-redct thio 97.7 0.00016 3.4E-09 57.7 7.8 34 82-115 1-36 (367)
253 TIGR01179 galE UDP-glucose-4-e 97.7 5.6E-05 1.2E-09 59.4 4.9 32 83-114 2-33 (328)
254 PRK00258 aroE shikimate 5-dehy 97.7 0.00024 5.2E-09 56.2 8.3 48 77-125 120-168 (278)
255 PLN02778 3,5-epimerase/4-reduc 97.7 0.00027 5.8E-09 56.3 8.2 58 81-140 10-67 (298)
256 TIGR01777 yfcH conserved hypot 97.6 6.5E-05 1.4E-09 58.4 3.6 58 83-140 1-67 (292)
257 PLN02520 bifunctional 3-dehydr 97.6 0.00024 5.2E-09 61.2 7.1 47 77-124 376-422 (529)
258 TIGR00521 coaBC_dfp phosphopan 97.5 0.0004 8.8E-09 57.7 7.8 65 77-141 182-276 (390)
259 PLN02166 dTDP-glucose 4,6-dehy 97.5 0.00079 1.7E-08 56.6 9.6 36 79-114 119-154 (436)
260 PF01370 Epimerase: NAD depend 97.5 0.0002 4.4E-09 53.8 5.5 33 83-115 1-33 (236)
261 COG1087 GalE UDP-glucose 4-epi 97.5 0.0002 4.3E-09 57.5 5.4 33 82-114 2-34 (329)
262 PRK14106 murD UDP-N-acetylmura 97.5 0.00047 1E-08 57.6 7.7 48 77-125 2-50 (450)
263 TIGR01181 dTDP_gluc_dehyt dTDP 97.5 0.00018 4E-09 56.3 4.9 32 82-113 1-34 (317)
264 PLN02206 UDP-glucuronate decar 97.5 0.00044 9.6E-09 58.2 7.2 37 78-114 117-153 (442)
265 PLN00016 RNA-binding protein; 97.4 0.00031 6.8E-09 57.5 6.0 38 79-116 51-92 (378)
266 TIGR03649 ergot_EASG ergot alk 97.4 0.00012 2.7E-09 57.2 3.4 34 83-116 2-35 (285)
267 COG0702 Predicted nucleoside-d 97.4 0.00035 7.6E-09 53.7 5.8 40 82-121 2-41 (275)
268 PRK11908 NAD-dependent epimera 97.4 0.00041 8.9E-09 55.9 6.4 36 81-116 2-38 (347)
269 COG1090 Predicted nucleoside-d 97.4 0.00032 7E-09 55.7 5.3 59 83-141 1-67 (297)
270 PRK08125 bifunctional UDP-gluc 97.4 0.00044 9.5E-09 60.9 6.5 38 79-116 314-352 (660)
271 TIGR00507 aroE shikimate 5-deh 97.4 0.00075 1.6E-08 53.1 7.2 47 78-125 115-161 (270)
272 PLN02695 GDP-D-mannose-3',5'-e 97.4 0.00049 1.1E-08 56.4 6.2 37 78-114 19-55 (370)
273 PRK09620 hypothetical protein; 97.3 0.001 2.3E-08 51.4 7.6 35 78-112 1-51 (229)
274 COG0451 WcaG Nucleoside-diphos 97.3 0.00029 6.2E-09 55.2 4.5 35 82-116 2-36 (314)
275 TIGR01214 rmlD dTDP-4-dehydror 97.3 0.00034 7.5E-09 54.5 4.9 31 83-113 2-32 (287)
276 PRK10084 dTDP-glucose 4,6 dehy 97.3 0.00035 7.6E-09 56.2 5.0 31 82-112 2-33 (352)
277 cd01075 NAD_bind_Leu_Phe_Val_D 97.3 0.00095 2.1E-08 50.5 6.9 47 76-123 24-70 (200)
278 PF01073 3Beta_HSD: 3-beta hyd 97.3 0.00026 5.6E-09 56.1 3.6 58 84-145 1-60 (280)
279 PRK02472 murD UDP-N-acetylmura 97.3 0.00058 1.3E-08 57.0 5.8 49 77-126 2-50 (447)
280 TIGR02114 coaB_strep phosphopa 97.2 0.0014 3E-08 50.6 7.0 59 82-140 16-90 (227)
281 PLN02260 probable rhamnose bio 97.2 0.00074 1.6E-08 59.3 6.1 36 78-113 4-41 (668)
282 cd01065 NAD_bind_Shikimate_DH 97.2 0.0022 4.8E-08 45.7 7.4 47 78-125 17-64 (155)
283 PRK12549 shikimate 5-dehydroge 97.1 0.0035 7.7E-08 49.9 8.6 51 77-128 124-175 (284)
284 PRK07201 short chain dehydroge 97.1 0.0022 4.9E-08 55.8 8.0 58 82-141 2-62 (657)
285 KOG1203 Predicted dehydrogenas 97.1 0.004 8.7E-08 52.1 9.0 47 76-122 75-121 (411)
286 TIGR02853 spore_dpaA dipicolin 97.1 0.0044 9.6E-08 49.4 8.9 43 76-119 147-189 (287)
287 COG0169 AroE Shikimate 5-dehyd 97.1 0.0034 7.5E-08 50.1 8.0 52 76-128 122-174 (283)
288 PF05368 NmrA: NmrA-like famil 97.0 0.0014 3E-08 49.9 5.4 33 83-115 1-33 (233)
289 PF04127 DFP: DNA / pantothena 97.0 0.0029 6.3E-08 47.5 6.8 65 78-142 1-94 (185)
290 PRK09987 dTDP-4-dehydrorhamnos 97.0 0.0027 5.8E-08 50.4 7.0 32 82-114 2-33 (299)
291 PRK05865 hypothetical protein; 97.0 0.0014 3E-08 59.4 5.7 33 82-114 2-34 (854)
292 PRK09310 aroDE bifunctional 3- 96.9 0.0038 8.2E-08 53.2 7.2 46 77-123 329-374 (477)
293 KOG1430 C-3 sterol dehydrogena 96.9 0.002 4.3E-08 53.1 5.2 37 79-115 3-41 (361)
294 PRK11150 rfaD ADP-L-glycero-D- 96.8 0.0017 3.7E-08 51.3 4.5 31 83-113 2-32 (308)
295 cd01080 NAD_bind_m-THF_DH_Cycl 96.8 0.0049 1.1E-07 45.6 6.6 45 76-120 40-84 (168)
296 PLN02503 fatty acyl-CoA reduct 96.8 0.0052 1.1E-07 53.9 7.8 38 77-114 116-156 (605)
297 PRK14027 quinate/shikimate deh 96.8 0.0083 1.8E-07 47.8 8.3 51 77-128 124-175 (283)
298 TIGR01809 Shik-DH-AROM shikima 96.8 0.0065 1.4E-07 48.3 7.3 48 77-125 122-170 (282)
299 COG1748 LYS9 Saccharopine dehy 96.7 0.0053 1.2E-07 51.1 6.7 57 81-142 2-59 (389)
300 PF00670 AdoHcyase_NAD: S-aden 96.7 0.018 3.9E-07 42.4 8.6 63 76-139 19-87 (162)
301 PF07993 NAD_binding_4: Male s 96.7 0.0034 7.4E-08 48.5 4.9 58 85-142 1-72 (249)
302 PRK12320 hypothetical protein; 96.6 0.0059 1.3E-07 54.4 6.8 34 82-115 2-35 (699)
303 PF03435 Saccharop_dh: Sacchar 96.6 0.0045 9.9E-08 50.8 5.5 57 83-143 1-59 (386)
304 KOG1429 dTDP-glucose 4-6-dehyd 96.6 0.006 1.3E-07 48.9 5.7 38 77-114 24-61 (350)
305 PRK06732 phosphopantothenate-- 96.5 0.016 3.4E-07 44.8 7.8 59 82-140 17-91 (229)
306 PRK13940 glutamyl-tRNA reducta 96.5 0.022 4.8E-07 47.8 8.9 47 77-124 178-225 (414)
307 TIGR02197 heptose_epim ADP-L-g 96.5 0.0037 8.1E-08 49.1 4.0 31 83-113 1-32 (314)
308 PF02737 3HCDH_N: 3-hydroxyacy 96.4 0.019 4E-07 42.7 7.5 42 83-125 2-43 (180)
309 PLN02996 fatty acyl-CoA reduct 96.4 0.015 3.2E-07 49.7 7.8 37 78-114 9-48 (491)
310 PRK08306 dipicolinate synthase 96.4 0.029 6.3E-07 44.9 8.9 41 77-118 149-189 (296)
311 PLN02725 GDP-4-keto-6-deoxyman 96.3 0.0033 7.2E-08 49.2 2.9 29 84-112 1-29 (306)
312 TIGR01915 npdG NADPH-dependent 96.2 0.025 5.3E-07 43.1 7.3 43 82-124 2-44 (219)
313 PRK12749 quinate/shikimate deh 96.1 0.041 8.9E-07 44.0 8.5 49 77-126 121-173 (288)
314 PF12076 Wax2_C: WAX2 C-termin 96.1 0.017 3.7E-07 42.3 5.6 47 83-131 1-47 (164)
315 PRK14192 bifunctional 5,10-met 96.1 0.029 6.2E-07 44.8 7.3 57 76-139 155-211 (283)
316 PLN02260 probable rhamnose bio 96.0 0.024 5.3E-07 49.8 7.3 56 81-139 381-437 (668)
317 cd08295 double_bond_reductase_ 96.0 0.025 5.5E-07 45.2 6.8 43 78-120 150-192 (338)
318 PF03807 F420_oxidored: NADP o 96.0 0.031 6.7E-07 36.6 6.1 41 82-124 2-46 (96)
319 PRK13982 bifunctional SbtC-lik 96.0 0.032 7E-07 47.6 7.6 64 77-141 253-346 (475)
320 PF02826 2-Hacid_dh_C: D-isome 96.0 0.07 1.5E-06 39.4 8.5 43 75-118 31-73 (178)
321 PRK12550 shikimate 5-dehydroge 96.0 0.025 5.4E-07 44.9 6.4 44 80-124 122-166 (272)
322 PRK06849 hypothetical protein; 96.0 0.031 6.6E-07 46.0 7.2 36 79-114 3-38 (389)
323 cd08293 PTGR2 Prostaglandin re 95.9 0.028 6.2E-07 44.8 6.7 40 81-120 156-196 (345)
324 cd05212 NAD_bind_m-THF_DH_Cycl 95.9 0.031 6.7E-07 40.1 6.1 44 76-119 24-67 (140)
325 KOG1204 Predicted dehydrogenas 95.9 0.0085 1.8E-07 46.6 3.4 64 79-142 5-94 (253)
326 TIGR02825 B4_12hDH leukotriene 95.9 0.032 7E-07 44.3 6.8 41 79-119 138-178 (325)
327 PRK14175 bifunctional 5,10-met 95.8 0.035 7.5E-07 44.5 6.8 42 77-118 155-196 (286)
328 COG4982 3-oxoacyl-[acyl-carrie 95.8 0.054 1.2E-06 47.7 8.2 70 76-145 392-466 (866)
329 PLN03154 putative allyl alcoho 95.8 0.033 7.1E-07 45.1 6.7 42 79-120 158-199 (348)
330 TIGR01035 hemA glutamyl-tRNA r 95.8 0.075 1.6E-06 44.5 8.9 45 77-122 177-222 (417)
331 KOG2733 Uncharacterized membra 95.8 0.015 3.2E-07 48.0 4.5 64 82-145 7-77 (423)
332 cd08253 zeta_crystallin Zeta-c 95.8 0.038 8.3E-07 42.8 6.8 42 78-119 143-184 (325)
333 cd05276 p53_inducible_oxidored 95.8 0.039 8.4E-07 42.7 6.7 41 78-118 138-178 (323)
334 TIGR02356 adenyl_thiF thiazole 95.7 0.058 1.3E-06 40.7 7.2 36 77-113 18-54 (202)
335 PLN02494 adenosylhomocysteinas 95.7 0.064 1.4E-06 45.8 8.1 40 77-117 251-290 (477)
336 PF02254 TrkA_N: TrkA-N domain 95.7 0.035 7.6E-07 37.5 5.4 54 83-144 1-54 (116)
337 TIGR00518 alaDH alanine dehydr 95.7 0.096 2.1E-06 43.3 8.9 42 78-120 165-206 (370)
338 COG0569 TrkA K+ transport syst 95.7 0.053 1.1E-06 41.7 6.9 55 82-142 2-56 (225)
339 cd08259 Zn_ADH5 Alcohol dehydr 95.6 0.048 1E-06 42.8 6.9 41 79-119 162-202 (332)
340 cd08294 leukotriene_B4_DH_like 95.6 0.048 1E-06 43.0 6.8 40 79-118 143-182 (329)
341 PRK07530 3-hydroxybutyryl-CoA 95.6 0.072 1.6E-06 42.2 7.8 42 81-123 5-46 (292)
342 PRK12475 thiamine/molybdopteri 95.6 0.067 1.4E-06 43.7 7.6 37 77-114 21-58 (338)
343 COG1088 RfbB dTDP-D-glucose 4, 95.6 0.015 3.2E-07 46.9 3.6 32 81-112 1-34 (340)
344 PRK05476 S-adenosyl-L-homocyst 95.5 0.081 1.8E-06 44.6 8.0 41 77-118 209-249 (425)
345 PRK14194 bifunctional 5,10-met 95.5 0.037 8E-07 44.6 5.7 43 77-119 156-198 (301)
346 PRK08655 prephenate dehydrogen 95.5 0.047 1E-06 46.1 6.5 40 82-121 2-41 (437)
347 cd08266 Zn_ADH_like1 Alcohol d 95.5 0.062 1.3E-06 42.1 6.9 41 78-118 165-205 (342)
348 PRK00045 hemA glutamyl-tRNA re 95.4 0.059 1.3E-06 45.2 6.9 46 77-123 179-225 (423)
349 PRK07819 3-hydroxybutyryl-CoA 95.4 0.1 2.2E-06 41.5 7.9 41 82-123 7-47 (286)
350 cd05291 HicDH_like L-2-hydroxy 95.3 0.071 1.5E-06 42.7 6.9 44 82-126 2-47 (306)
351 cd00401 AdoHcyase S-adenosyl-L 95.3 0.069 1.5E-06 44.9 6.9 43 77-120 199-241 (413)
352 PRK06718 precorrin-2 dehydroge 95.3 0.065 1.4E-06 40.6 6.1 37 77-114 7-43 (202)
353 PF00056 Ldh_1_N: lactate/mala 95.2 0.15 3.3E-06 36.3 7.6 45 82-126 2-48 (141)
354 COG0604 Qor NADPH:quinone redu 95.2 0.059 1.3E-06 43.7 6.1 39 80-118 143-181 (326)
355 cd08268 MDR2 Medium chain dehy 95.2 0.079 1.7E-06 41.1 6.7 41 79-119 144-184 (328)
356 PF02882 THF_DHG_CYH_C: Tetrah 95.2 0.042 9E-07 40.4 4.7 43 77-119 33-75 (160)
357 PF13241 NAD_binding_7: Putati 95.2 0.028 6.1E-07 37.8 3.6 37 77-114 4-40 (103)
358 COG1089 Gmd GDP-D-mannose dehy 95.2 0.024 5.2E-07 45.6 3.6 64 80-143 2-68 (345)
359 PRK06129 3-hydroxyacyl-CoA deh 95.2 0.096 2.1E-06 41.9 7.2 39 82-121 4-42 (308)
360 PRK09260 3-hydroxybutyryl-CoA 95.1 0.1 2.2E-06 41.3 7.1 40 82-122 3-42 (288)
361 COG1064 AdhP Zn-dependent alco 95.1 0.087 1.9E-06 43.2 6.8 42 78-120 165-206 (339)
362 cd01079 NAD_bind_m-THF_DH NAD 95.1 0.1 2.2E-06 39.6 6.6 35 77-111 59-93 (197)
363 PRK14191 bifunctional 5,10-met 95.1 0.1 2.3E-06 41.7 7.0 42 77-118 154-195 (285)
364 PRK01438 murD UDP-N-acetylmura 95.0 0.17 3.6E-06 42.8 8.6 38 77-115 13-50 (480)
365 PRK06035 3-hydroxyacyl-CoA deh 95.0 0.11 2.4E-06 41.1 7.1 41 81-122 4-44 (291)
366 KOG1221 Acyl-CoA reductase [Li 95.0 0.099 2.1E-06 44.6 7.1 36 78-113 10-48 (467)
367 PF04321 RmlD_sub_bind: RmlD s 95.0 0.081 1.8E-06 41.9 6.3 33 82-114 2-34 (286)
368 PTZ00075 Adenosylhomocysteinas 95.0 0.14 3E-06 43.8 8.0 41 76-117 250-290 (476)
369 PRK09496 trkA potassium transp 95.0 0.097 2.1E-06 43.6 7.0 59 78-142 229-287 (453)
370 PRK04148 hypothetical protein; 95.0 0.14 3.1E-06 36.5 6.8 54 79-141 16-69 (134)
371 TIGR02824 quinone_pig3 putativ 94.9 0.12 2.6E-06 40.1 6.8 40 79-118 139-178 (325)
372 TIGR03443 alpha_am_amid L-amin 94.9 0.15 3.3E-06 48.2 8.6 36 80-115 971-1010(1389)
373 PF12242 Eno-Rase_NADH_b: NAD( 94.9 0.052 1.1E-06 35.1 3.9 32 81-112 40-72 (78)
374 PLN00203 glutamyl-tRNA reducta 94.8 0.1 2.2E-06 45.2 6.7 46 77-123 263-309 (519)
375 cd05213 NAD_bind_Glutamyl_tRNA 94.8 0.12 2.5E-06 41.7 6.7 45 78-123 176-221 (311)
376 PRK08293 3-hydroxybutyryl-CoA 94.7 0.15 3.3E-06 40.3 7.2 40 82-122 5-44 (287)
377 PRK04308 murD UDP-N-acetylmura 94.7 0.079 1.7E-06 44.4 5.8 37 78-115 3-39 (445)
378 PRK08762 molybdopterin biosynt 94.7 0.18 3.8E-06 41.7 7.7 54 78-132 133-206 (376)
379 PRK14188 bifunctional 5,10-met 94.7 0.092 2E-06 42.3 5.8 38 77-114 155-193 (296)
380 PRK07688 thiamine/molybdopteri 94.7 0.18 3.9E-06 41.2 7.6 36 77-113 21-57 (339)
381 PRK09880 L-idonate 5-dehydroge 94.6 0.13 2.9E-06 41.2 6.8 41 78-119 168-209 (343)
382 TIGR03201 dearomat_had 6-hydro 94.6 0.13 2.8E-06 41.5 6.7 41 78-119 165-205 (349)
383 PF01210 NAD_Gly3P_dh_N: NAD-d 94.5 0.15 3.2E-06 36.8 6.2 37 83-120 2-38 (157)
384 PRK07066 3-hydroxybutyryl-CoA 94.5 0.19 4.2E-06 40.8 7.4 40 82-122 9-48 (321)
385 PLN02545 3-hydroxybutyryl-CoA 94.5 0.24 5.2E-06 39.2 7.9 39 81-120 5-43 (295)
386 PRK10792 bifunctional 5,10-met 94.5 0.12 2.5E-06 41.5 6.0 43 77-119 156-198 (285)
387 PRK00066 ldh L-lactate dehydro 94.5 0.19 4.1E-06 40.6 7.3 48 79-127 5-54 (315)
388 PRK12480 D-lactate dehydrogena 94.5 0.19 4.1E-06 40.9 7.3 39 77-116 143-181 (330)
389 cd08289 MDR_yhfp_like Yhfp put 94.4 0.16 3.5E-06 39.9 6.7 40 80-119 147-186 (326)
390 COG3320 Putative dehydrogenase 94.4 0.28 6.1E-06 40.7 8.2 61 81-141 1-71 (382)
391 PRK05690 molybdopterin biosynt 94.4 0.35 7.6E-06 37.6 8.4 55 77-132 29-103 (245)
392 PRK14190 bifunctional 5,10-met 94.4 0.16 3.5E-06 40.7 6.6 43 77-119 155-197 (284)
393 PF03446 NAD_binding_2: NAD bi 94.3 0.17 3.7E-06 36.7 6.2 39 82-121 3-41 (163)
394 PRK06130 3-hydroxybutyryl-CoA 94.3 0.21 4.6E-06 39.8 7.1 41 82-123 6-46 (311)
395 TIGR02822 adh_fam_2 zinc-bindi 94.3 0.19 4E-06 40.4 6.8 39 79-118 165-203 (329)
396 cd05288 PGDH Prostaglandin deh 94.3 0.19 4.1E-06 39.6 6.7 40 79-118 145-184 (329)
397 TIGR02279 PaaC-3OHAcCoADH 3-hy 94.2 0.21 4.5E-06 43.0 7.3 40 82-122 7-46 (503)
398 COG2085 Predicted dinucleotide 94.2 0.14 3.1E-06 39.2 5.7 33 84-116 4-36 (211)
399 PRK06719 precorrin-2 dehydroge 94.2 0.12 2.6E-06 37.6 5.1 35 77-112 10-44 (157)
400 cd05188 MDR Medium chain reduc 94.2 0.19 4.1E-06 38.0 6.4 41 78-119 133-173 (271)
401 cd08270 MDR4 Medium chain dehy 94.1 0.21 4.5E-06 38.8 6.7 42 79-120 132-173 (305)
402 cd05191 NAD_bind_amino_acid_DH 94.1 0.21 4.6E-06 32.3 5.7 35 77-112 20-55 (86)
403 PLN02928 oxidoreductase family 94.1 0.16 3.5E-06 41.6 6.2 38 76-114 155-192 (347)
404 KOG1198 Zinc-binding oxidoredu 94.1 0.37 7.9E-06 39.6 8.3 38 78-115 156-193 (347)
405 TIGR00936 ahcY adenosylhomocys 94.1 0.2 4.3E-06 42.1 6.7 40 77-117 192-231 (406)
406 PRK13243 glyoxylate reductase; 94.1 0.22 4.8E-06 40.5 6.9 39 76-115 146-184 (333)
407 cd01336 MDH_cytoplasmic_cytoso 94.1 0.093 2E-06 42.6 4.7 33 82-114 4-43 (325)
408 PRK14189 bifunctional 5,10-met 94.1 0.15 3.2E-06 40.9 5.7 42 77-118 155-196 (285)
409 PRK08268 3-hydroxy-acyl-CoA de 94.0 0.25 5.3E-06 42.6 7.4 41 82-123 9-49 (507)
410 TIGR02355 moeB molybdopterin s 94.0 0.38 8.2E-06 37.4 7.8 55 77-132 21-95 (240)
411 PRK11199 tyrA bifunctional cho 94.0 0.18 4E-06 41.6 6.4 35 80-114 98-132 (374)
412 cd05311 NAD_bind_2_malic_enz N 94.0 0.22 4.8E-06 38.3 6.4 36 77-113 22-60 (226)
413 COG5322 Predicted dehydrogenas 94.0 0.14 3.1E-06 41.0 5.3 47 77-123 164-210 (351)
414 PRK14176 bifunctional 5,10-met 93.9 0.18 3.8E-06 40.5 5.9 43 76-118 160-202 (287)
415 cd08241 QOR1 Quinone oxidoredu 93.9 0.24 5.1E-06 38.3 6.6 41 78-118 138-178 (323)
416 PRK08223 hypothetical protein; 93.9 0.39 8.5E-06 38.5 7.9 56 77-133 24-99 (287)
417 cd08244 MDR_enoyl_red Possible 93.9 0.26 5.7E-06 38.5 6.9 40 79-118 142-181 (324)
418 PRK00141 murD UDP-N-acetylmura 93.8 0.21 4.6E-06 42.4 6.7 41 76-117 11-51 (473)
419 PRK14183 bifunctional 5,10-met 93.8 0.18 3.9E-06 40.3 5.8 43 76-118 153-195 (281)
420 PF02558 ApbA: Ketopantoate re 93.8 0.25 5.5E-06 34.8 6.1 35 83-119 1-35 (151)
421 cd08239 THR_DH_like L-threonin 93.8 0.21 4.5E-06 39.8 6.2 41 78-119 162-203 (339)
422 PRK10669 putative cation:proto 93.8 0.14 3.1E-06 44.3 5.6 54 82-143 419-472 (558)
423 cd08250 Mgc45594_like Mgc45594 93.7 0.26 5.7E-06 38.8 6.6 41 78-118 138-178 (329)
424 cd05280 MDR_yhdh_yhfp Yhdh and 93.7 0.28 6.1E-06 38.4 6.8 39 80-118 147-185 (325)
425 PRK14179 bifunctional 5,10-met 93.7 0.16 3.5E-06 40.7 5.3 36 77-112 155-190 (284)
426 cd08230 glucose_DH Glucose deh 93.7 0.27 5.9E-06 39.6 6.8 34 79-113 172-205 (355)
427 PRK14177 bifunctional 5,10-met 93.7 0.19 4.1E-06 40.2 5.7 43 76-118 155-197 (284)
428 cd08292 ETR_like_2 2-enoyl thi 93.7 0.27 5.8E-06 38.6 6.6 40 79-118 139-178 (324)
429 PRK08644 thiamine biosynthesis 93.7 0.57 1.2E-05 35.7 8.1 35 78-113 26-61 (212)
430 PRK15469 ghrA bifunctional gly 93.6 0.18 4E-06 40.7 5.6 39 76-115 132-170 (312)
431 PRK15116 sulfur acceptor prote 93.6 0.52 1.1E-05 37.4 8.1 36 77-113 27-63 (268)
432 cd01076 NAD_bind_1_Glu_DH NAD( 93.6 0.34 7.5E-06 37.4 6.9 36 76-112 27-63 (227)
433 PRK14173 bifunctional 5,10-met 93.6 0.2 4.4E-06 40.1 5.8 42 77-118 152-193 (287)
434 TIGR03366 HpnZ_proposed putati 93.6 0.26 5.6E-06 38.5 6.4 39 79-118 120-159 (280)
435 PRK14172 bifunctional 5,10-met 93.6 0.21 4.5E-06 39.9 5.7 43 77-119 155-197 (278)
436 PRK05597 molybdopterin biosynt 93.6 0.52 1.1E-05 38.7 8.3 57 77-134 25-101 (355)
437 cd00650 LDH_MDH_like NAD-depen 93.5 0.18 4E-06 39.3 5.3 44 83-126 1-48 (263)
438 PF00070 Pyr_redox: Pyridine n 93.5 0.41 8.9E-06 30.3 6.1 32 83-115 2-33 (80)
439 PRK09496 trkA potassium transp 93.4 0.25 5.4E-06 41.2 6.3 38 82-120 2-39 (453)
440 cd08243 quinone_oxidoreductase 93.4 0.34 7.5E-06 37.6 6.8 41 78-118 141-181 (320)
441 TIGR02354 thiF_fam2 thiamine b 93.4 0.16 3.5E-06 38.4 4.7 35 78-113 19-54 (200)
442 cd08246 crotonyl_coA_red croto 93.4 0.33 7.1E-06 39.7 6.8 41 79-119 193-233 (393)
443 TIGR01470 cysG_Nterm siroheme 93.3 0.32 7E-06 36.9 6.3 38 77-115 6-43 (205)
444 PRK14170 bifunctional 5,10-met 93.3 0.24 5.1E-06 39.7 5.7 42 77-118 154-195 (284)
445 PRK06487 glycerate dehydrogena 93.3 0.16 3.4E-06 41.1 4.8 37 76-113 144-180 (317)
446 PRK14186 bifunctional 5,10-met 93.3 0.24 5.2E-06 39.9 5.7 43 77-119 155-197 (297)
447 PRK14169 bifunctional 5,10-met 93.3 0.25 5.5E-06 39.5 5.8 42 77-118 153-194 (282)
448 cd05286 QOR2 Quinone oxidoredu 93.3 0.37 8.1E-06 37.0 6.7 41 78-118 135-175 (320)
449 PRK05808 3-hydroxybutyryl-CoA 93.3 0.46 9.9E-06 37.4 7.3 37 82-119 5-41 (282)
450 PRK14180 bifunctional 5,10-met 93.3 0.25 5.5E-06 39.5 5.8 42 77-118 155-196 (282)
451 PTZ00354 alcohol dehydrogenase 93.2 0.36 7.9E-06 37.8 6.7 40 79-118 140-179 (334)
452 cd00757 ThiF_MoeB_HesA_family 93.2 0.64 1.4E-05 35.6 7.9 54 77-131 18-91 (228)
453 COG1648 CysG Siroheme synthase 93.1 0.4 8.6E-06 36.7 6.5 37 77-114 9-45 (210)
454 TIGR02818 adh_III_F_hyde S-(hy 93.1 0.36 7.9E-06 39.3 6.7 40 79-119 185-225 (368)
455 PF00899 ThiF: ThiF family; I 93.1 0.72 1.6E-05 32.2 7.4 52 80-132 2-73 (135)
456 TIGR01751 crot-CoA-red crotony 93.1 0.36 7.9E-06 39.6 6.8 41 78-118 188-228 (398)
457 PRK13771 putative alcohol dehy 93.1 0.41 8.9E-06 37.8 6.9 41 79-119 162-202 (334)
458 cd08291 ETR_like_1 2-enoyl thi 93.1 0.37 8E-06 38.1 6.6 40 80-119 144-183 (324)
459 COG0373 HemA Glutamyl-tRNA red 93.1 0.37 8.1E-06 40.5 6.8 48 77-125 175-223 (414)
460 PLN02586 probable cinnamyl alc 93.0 0.29 6.2E-06 39.8 6.0 39 79-118 183-221 (360)
461 cd00755 YgdL_like Family of ac 93.0 0.53 1.2E-05 36.5 7.1 35 78-113 9-44 (231)
462 PRK14187 bifunctional 5,10-met 93.0 0.28 6E-06 39.5 5.7 43 77-119 157-199 (294)
463 PRK14178 bifunctional 5,10-met 93.0 0.36 7.9E-06 38.5 6.3 44 77-120 149-192 (279)
464 PLN02516 methylenetetrahydrofo 93.0 0.28 6.1E-06 39.5 5.7 44 76-119 163-206 (299)
465 cd08238 sorbose_phosphate_red 93.0 0.33 7.1E-06 40.2 6.3 42 79-120 175-219 (410)
466 PLN02740 Alcohol dehydrogenase 93.0 0.35 7.6E-06 39.5 6.4 41 78-119 197-238 (381)
467 PRK11730 fadB multifunctional 93.0 0.39 8.5E-06 43.0 7.2 40 81-121 314-353 (715)
468 PRK14171 bifunctional 5,10-met 92.9 0.29 6.2E-06 39.3 5.6 42 77-118 156-197 (288)
469 PRK14166 bifunctional 5,10-met 92.9 0.31 6.7E-06 39.0 5.8 43 77-119 154-196 (282)
470 cd08237 ribitol-5-phosphate_DH 92.9 0.36 7.8E-06 38.9 6.3 41 79-120 163-205 (341)
471 PRK14968 putative methyltransf 92.9 0.88 1.9E-05 32.9 7.9 60 79-141 23-84 (188)
472 smart00829 PKS_ER Enoylreducta 92.8 0.51 1.1E-05 35.7 6.8 42 78-119 103-144 (288)
473 PF03721 UDPG_MGDP_dh_N: UDP-g 92.8 0.26 5.6E-06 36.8 5.0 32 88-119 7-38 (185)
474 TIGR02437 FadB fatty oxidation 92.8 0.43 9.4E-06 42.8 7.2 41 82-123 315-355 (714)
475 TIGR02817 adh_fam_1 zinc-bindi 92.8 0.42 9.1E-06 37.7 6.5 39 80-118 149-188 (336)
476 TIGR01505 tartro_sem_red 2-hyd 92.7 0.32 7E-06 38.4 5.8 33 88-120 6-38 (291)
477 cd08296 CAD_like Cinnamyl alco 92.7 0.47 1E-05 37.8 6.7 40 79-119 163-202 (333)
478 PRK07531 bifunctional 3-hydrox 92.7 0.49 1.1E-05 40.5 7.2 38 81-120 6-43 (495)
479 PRK14182 bifunctional 5,10-met 92.7 0.34 7.4E-06 38.8 5.8 42 77-118 154-195 (282)
480 cd08300 alcohol_DH_class_III c 92.7 0.48 1E-05 38.4 6.8 40 79-119 186-226 (368)
481 PRK05600 thiamine biosynthesis 92.7 0.78 1.7E-05 38.0 8.1 54 77-131 38-111 (370)
482 cd05282 ETR_like 2-enoyl thioe 92.6 0.45 9.8E-06 37.2 6.4 40 78-117 137-176 (323)
483 cd01492 Aos1_SUMO Ubiquitin ac 92.6 0.85 1.8E-05 34.3 7.6 54 78-132 19-92 (197)
484 PRK13403 ketol-acid reductoiso 92.5 0.62 1.3E-05 38.1 7.2 38 76-114 12-49 (335)
485 PLN02178 cinnamyl-alcohol dehy 92.5 0.42 9.2E-06 39.2 6.4 37 79-116 178-214 (375)
486 PRK06522 2-dehydropantoate 2-r 92.5 0.42 9.1E-06 37.5 6.1 38 82-120 2-39 (304)
487 cd08288 MDR_yhdh Yhdh putative 92.5 0.56 1.2E-05 36.8 6.8 40 79-118 146-185 (324)
488 PTZ00079 NADP-specific glutama 92.4 0.56 1.2E-05 39.9 6.9 37 76-113 233-270 (454)
489 cd01487 E1_ThiF_like E1_ThiF_l 92.3 1 2.2E-05 33.2 7.6 31 83-114 2-33 (174)
490 cd08281 liver_ADH_like1 Zinc-d 92.2 0.52 1.1E-05 38.3 6.5 39 79-118 191-230 (371)
491 PRK14184 bifunctional 5,10-met 92.2 0.49 1.1E-05 37.9 6.1 44 77-120 154-201 (286)
492 PLN02616 tetrahydrofolate dehy 92.2 0.36 7.9E-06 39.9 5.4 43 77-119 228-270 (364)
493 TIGR02441 fa_ox_alpha_mit fatt 92.1 0.54 1.2E-05 42.4 6.9 43 81-124 336-378 (737)
494 COG1091 RfbD dTDP-4-dehydrorha 92.1 0.55 1.2E-05 37.6 6.2 31 83-114 3-33 (281)
495 cd01483 E1_enzyme_family Super 92.1 1.5 3.2E-05 30.8 8.0 30 83-113 2-32 (143)
496 PRK07574 formate dehydrogenase 92.0 0.49 1.1E-05 39.4 6.1 38 76-114 188-225 (385)
497 COG2910 Putative NADH-flavin r 91.9 0.3 6.5E-06 37.0 4.3 37 82-118 2-38 (211)
498 cd08290 ETR 2-enoyl thioester 91.9 0.71 1.5E-05 36.6 6.8 36 79-114 146-181 (341)
499 PRK14618 NAD(P)H-dependent gly 91.8 0.79 1.7E-05 36.8 7.0 38 83-121 7-44 (328)
500 cd08301 alcohol_DH_plants Plan 91.8 0.67 1.5E-05 37.5 6.7 39 79-118 187-226 (369)
No 1
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.44 E-value=5.1e-13 Score=104.98 Aligned_cols=69 Identities=26% Similarity=0.418 Sum_probs=63.8
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
.+.+++++|||+++|||+++|+.|+++|++|++++|++++++++.++++.+++....++.+|+++..++
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~ 71 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEAL 71 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHH
Confidence 467889999999999999999999999999999999999999999999999888888999999986543
No 2
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.31 E-value=5.3e-12 Score=97.64 Aligned_cols=65 Identities=25% Similarity=0.401 Sum_probs=57.2
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+++|+++|||+++|||.++|++|+++|++|++.+|+.+++++++.++.+ .....+.+|++|..+
T Consensus 3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~---~~~~~~~~DVtD~~~ 67 (246)
T COG4221 3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA---GAALALALDVTDRAA 67 (246)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc---CceEEEeeccCCHHH
Confidence 45679999999999999999999999999999999999999988888764 446778899998654
No 3
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.30 E-value=4.3e-12 Score=100.50 Aligned_cols=72 Identities=29% Similarity=0.358 Sum_probs=65.2
Q ss_pred CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCe-EEEEEcccCCCCCc
Q 032110 74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ-HVVQNVMLAKGMKW 145 (147)
Q Consensus 74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~-~~~~~~dv~~~~~~ 145 (147)
.+..+.+|+++|||+++|||.++|++|+.+|++++++.|..+++++..+++++..... .+++++|++|+.++
T Consensus 6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~ 78 (282)
T KOG1205|consen 6 FMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESV 78 (282)
T ss_pred cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHH
Confidence 3446889999999999999999999999999999999999999999999999887777 88899999997754
No 4
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.29 E-value=1.2e-11 Score=96.32 Aligned_cols=70 Identities=27% Similarity=0.335 Sum_probs=59.8
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
+++++|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++.+..+....++.+|++|+.++
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i 73 (263)
T PRK08339 4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDL 73 (263)
T ss_pred cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHH
Confidence 3578999999999999999999999999999999999999888888777665454466789999987543
No 5
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.27 E-value=2.1e-11 Score=97.49 Aligned_cols=70 Identities=24% Similarity=0.416 Sum_probs=60.2
Q ss_pred CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCC-eEEEEEcccCCCCC
Q 032110 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVVQNVMLAKGMK 144 (147)
Q Consensus 75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~-~~~~~~~dv~~~~~ 144 (147)
..++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+..++ ...++.+|++|..+
T Consensus 9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~s 79 (313)
T PRK05854 9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLAS 79 (313)
T ss_pred CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHH
Confidence 34678999999999999999999999999999999999999999888888776543 35677899988554
No 6
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=99.22 E-value=5.1e-11 Score=94.09 Aligned_cols=70 Identities=30% Similarity=0.330 Sum_probs=59.8
Q ss_pred CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC--CeEEEEEcccCCCCC
Q 032110 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG--EQHVVQNVMLAKGMK 144 (147)
Q Consensus 75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~--~~~~~~~~dv~~~~~ 144 (147)
...+.||+++|||+++|||+++|++|++.|++|++++|+++.+++...++..... .....+.+|++++.+
T Consensus 3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 74 (270)
T KOG0725|consen 3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVD 74 (270)
T ss_pred CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHH
Confidence 4568999999999999999999999999999999999999999888888766433 346778899987654
No 7
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.19 E-value=6.6e-11 Score=95.34 Aligned_cols=72 Identities=26% Similarity=0.340 Sum_probs=62.3
Q ss_pred CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCe-EEEEEcccCCCCCc
Q 032110 74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ-HVVQNVMLAKGMKW 145 (147)
Q Consensus 74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~-~~~~~~dv~~~~~~ 145 (147)
...++.+++++|||+++|||+++|+.|+.+|++|++.+|+.+..+++++++.+...+. ..++++|+++..++
T Consensus 29 ~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV 101 (314)
T KOG1208|consen 29 HGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSV 101 (314)
T ss_pred ccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHH
Confidence 4456788999999999999999999999999999999999999999999998855544 56679999985543
No 8
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.19 E-value=8.9e-11 Score=90.87 Aligned_cols=70 Identities=31% Similarity=0.449 Sum_probs=59.6
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCC-eEEEEEcccCCCCCc
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVVQNVMLAKGMKW 145 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~-~~~~~~~dv~~~~~~ 145 (147)
.++++|+++||||++|||+++++.|+++|++|++++|+.+++++..+++.+.++. ....+.+|++|..++
T Consensus 4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 74 (265)
T PRK07062 4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADV 74 (265)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHH
Confidence 4578999999999999999999999999999999999999888888888766544 456778899886543
No 9
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.17 E-value=1.3e-10 Score=89.64 Aligned_cols=69 Identities=22% Similarity=0.353 Sum_probs=57.9
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH-hCCeEEEEEcccCCCCCc
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE-FGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~-~~~~~~~~~~dv~~~~~~ 145 (147)
.+++|+++|||+++|||+++++.|+++|++|++++|+++.+++..+++... .+....++.+|++++.++
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 73 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASV 73 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHH
Confidence 478899999999999999999999999999999999998888888877653 233456788999886543
No 10
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=99.17 E-value=1.6e-10 Score=92.07 Aligned_cols=64 Identities=30% Similarity=0.496 Sum_probs=59.8
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
|+.++|||++.|||++.+++||++|.+|++++|++++++...+|+.++++..+.++..|.+++.
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~ 112 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGD 112 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCc
Confidence 4799999999999999999999999999999999999999999999999977778889998765
No 11
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.16 E-value=1.3e-10 Score=90.06 Aligned_cols=70 Identities=20% Similarity=0.369 Sum_probs=56.5
Q ss_pred CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
...+++|+++|||+++|||+++++.|+++|++|++++| +.+.+++..+++....+....++.+|++|..+
T Consensus 3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 73 (260)
T PRK08416 3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPET 73 (260)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 34678999999999999999999999999999998864 56667777677765555556778899988654
No 12
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.16 E-value=1.3e-10 Score=89.42 Aligned_cols=68 Identities=24% Similarity=0.349 Sum_probs=57.3
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+.+++|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++... +.....+.+|++++.+
T Consensus 5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~ 72 (253)
T PRK05867 5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS-GGKVVPVCCDVSQHQQ 72 (253)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEEccCCCHHH
Confidence 4578999999999999999999999999999999999998888887777654 3345677889887654
No 13
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.15 E-value=1.5e-10 Score=88.77 Aligned_cols=68 Identities=12% Similarity=0.183 Sum_probs=57.7
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
++++|+++|||+++|||++++++|+++|++|++.+|+.+.+++..+++.+. +.....+.+|+++..++
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~-~~~~~~~~~D~~~~~~~ 69 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL-TDNVYSFQLKDFSQESI 69 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHH
Confidence 478899999999999999999999999999999999999998888777654 33456778898876543
No 14
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.15 E-value=1.6e-10 Score=92.40 Aligned_cols=69 Identities=23% Similarity=0.296 Sum_probs=54.5
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh----------HHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA----------ERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~----------~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
+.+++|+++||||++|||++++++|+++|++|++++|+. +.+++..+++.. .+....++.+|++++.++
T Consensus 4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~~v 82 (305)
T PRK08303 4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTA-AGGRGIAVQVDHLVPEQV 82 (305)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHh-cCCceEEEEcCCCCHHHH
Confidence 457899999999999999999999999999999999974 345555555543 344456788999886544
No 15
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.15 E-value=1.8e-10 Score=88.67 Aligned_cols=68 Identities=29% Similarity=0.395 Sum_probs=56.7
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+++++|+++|||+++|||.++++.|+++|++|++++|+++++++..+++.+. +....++.+|+++..+
T Consensus 2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~ 69 (254)
T PRK07478 2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE-GGEAVALAGDVRDEAY 69 (254)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHH
Confidence 3567899999999999999999999999999999999998888887777654 3345677888887543
No 16
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.14 E-value=1.8e-10 Score=90.39 Aligned_cols=68 Identities=26% Similarity=0.334 Sum_probs=57.3
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
.+++|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++... +....++.+|++|..++
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~-~~~~~~~~~Dv~d~~~v 70 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE-GFDVHGVMCDVRHREEV 70 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEeCCCCCHHHH
Confidence 478999999999999999999999999999999999998888887777644 33456778999886543
No 17
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.14 E-value=2.8e-10 Score=90.31 Aligned_cols=71 Identities=18% Similarity=0.298 Sum_probs=58.7
Q ss_pred CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC-CeEEEEEcccCCCCC
Q 032110 74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVVQNVMLAKGMK 144 (147)
Q Consensus 74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~~~dv~~~~~ 144 (147)
..+++.+|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+..+ ....++.+|++|..+
T Consensus 10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~ 81 (306)
T PRK06197 10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLAS 81 (306)
T ss_pred ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHH
Confidence 34567899999999999999999999999999999999999888877777765443 235577899988654
No 18
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.13 E-value=2.2e-10 Score=92.58 Aligned_cols=69 Identities=25% Similarity=0.377 Sum_probs=58.3
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
+.+.+|+++|||+++|||+++++.|+++|++|++++|+++.+++..+++.+. +....++.+|++|..++
T Consensus 3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~-g~~~~~~~~Dv~d~~~v 71 (330)
T PRK06139 3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL-GAEVLVVPTDVTDADQV 71 (330)
T ss_pred cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeeCCCHHHH
Confidence 3567899999999999999999999999999999999999998888877654 44456778899886543
No 19
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.13 E-value=3.8e-10 Score=89.46 Aligned_cols=69 Identities=23% Similarity=0.369 Sum_probs=57.6
Q ss_pred CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
...+.+|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+. +....++.+|++|..+
T Consensus 35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~-~~~~~~~~~Dl~d~~~ 103 (293)
T PRK05866 35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA-GGDAMAVPCDLSDLDA 103 (293)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHH
Confidence 45578899999999999999999999999999999999998888877777554 3335577889887654
No 20
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.13 E-value=2.4e-10 Score=88.67 Aligned_cols=71 Identities=15% Similarity=0.189 Sum_probs=53.0
Q ss_pred CCCCCCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 73 KREPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 73 ~~~~~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
.+.+.+++|+++|||++ +|||++++++|+++|++|++++|+.+.. +..+++.++.+. ..++.+|++|..++
T Consensus 3 ~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~-~~~~~~~~~~~~-~~~~~~D~~~~~~v 75 (258)
T PRK07533 3 QPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYVEPLAEELDA-PIFLPLDVREPGQL 75 (258)
T ss_pred CcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHHHhhcc-ceEEecCcCCHHHH
Confidence 45566889999999998 5999999999999999999999986432 233444444333 35678888886543
No 21
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.12 E-value=3.2e-10 Score=87.60 Aligned_cols=69 Identities=30% Similarity=0.430 Sum_probs=59.2
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
.+++|+++|||+++|||+++++.|+++|++|++++|+.+++++..+++.+..+....++.+|++++.++
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~ 72 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAR 72 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHH
Confidence 468899999999999999999999999999999999999888887778766555566788999886543
No 22
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.11 E-value=1.7e-10 Score=91.47 Aligned_cols=70 Identities=21% Similarity=0.313 Sum_probs=61.6
Q ss_pred CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
+..+.+|++++||||++|+|+++|.+|+++|++++++|.+.+..++.++++++. | ......||+++.+++
T Consensus 32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~-g-~~~~y~cdis~~eei 101 (300)
T KOG1201|consen 32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI-G-EAKAYTCDISDREEI 101 (300)
T ss_pred chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc-C-ceeEEEecCCCHHHH
Confidence 445788999999999999999999999999999999999999999998888876 4 567788999986654
No 23
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.11 E-value=3.7e-10 Score=86.89 Aligned_cols=69 Identities=35% Similarity=0.466 Sum_probs=57.5
Q ss_pred CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+.+.+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +.....+.+|+++...
T Consensus 4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~ 72 (254)
T PRK08085 4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE-GIKAHAAPFNVTHKQE 72 (254)
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEecCCCCHHH
Confidence 34578999999999999999999999999999999999998888877777654 3335567888887654
No 24
>PRK06194 hypothetical protein; Provisional
Probab=99.10 E-value=3.6e-10 Score=88.43 Aligned_cols=67 Identities=21% Similarity=0.321 Sum_probs=55.8
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+.+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +....++.+|++|..+
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~ 69 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ-GAEVLGVRTDVSDAAQ 69 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEECCCCCHHH
Confidence 467889999999999999999999999999999999988888777776543 3345667899988554
No 25
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.10 E-value=3.5e-10 Score=87.77 Aligned_cols=64 Identities=25% Similarity=0.303 Sum_probs=51.7
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
++++|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++ +....++.+|++++.+
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~ 66 (261)
T PRK08265 3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL----GERARFIATDITDDAA 66 (261)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCeeEEEEecCCCHHH
Confidence 467899999999999999999999999999999999987766554443 3335566788877543
No 26
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.10 E-value=4.5e-10 Score=86.44 Aligned_cols=68 Identities=31% Similarity=0.442 Sum_probs=57.0
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.++++|+++|||+++|||++++++|+++|++|++.+|+++++++..+++... +....++.+|++++.+
T Consensus 6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~~~~~~~~~D~~~~~~ 73 (255)
T PRK07523 6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ-GLSAHALAFDVTDHDA 73 (255)
T ss_pred cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CceEEEEEccCCCHHH
Confidence 3578999999999999999999999999999999999998887777766543 3445677889988654
No 27
>PRK08589 short chain dehydrogenase; Validated
Probab=99.10 E-value=4.3e-10 Score=87.81 Aligned_cols=67 Identities=24% Similarity=0.336 Sum_probs=55.4
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
.+++|+++|||+++|||+++++.|+++|++|++++|+ +.+++..+++.+. +.....+.+|++++.++
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~ 69 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN-GGKAKAYHVDISDEQQV 69 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc-CCeEEEEEeecCCHHHH
Confidence 3678999999999999999999999999999999999 7777777777543 34456778898886543
No 28
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.09 E-value=4.5e-10 Score=90.73 Aligned_cols=69 Identities=23% Similarity=0.390 Sum_probs=58.6
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
..+++|+++|||+++|||+++++.|+++|++|++++|+++.+++..+++.+. +....++.+|++|..++
T Consensus 4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~-g~~~~~v~~Dv~d~~~v 72 (334)
T PRK07109 4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA-GGEALAVVADVADAEAV 72 (334)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc-CCcEEEEEecCCCHHHH
Confidence 3467899999999999999999999999999999999999888887777654 44466788999886544
No 29
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.09 E-value=3.8e-10 Score=87.76 Aligned_cols=67 Identities=25% Similarity=0.324 Sum_probs=52.8
Q ss_pred CCCCCEEEEeCCcC--hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 77 MLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 77 ~~~~k~~lVTG~s~--GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
.+++|+++|||+++ |||+++++.|+++|++|++.+|++ ..++.++++.++.+.. .++.+|++|+.++
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~-~~~~~Dv~~~~~v 73 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCN-FVSELDVTNPKSI 73 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCc-eEEEccCCCHHHH
Confidence 46789999999997 999999999999999999999884 4455566666554433 4678999987654
No 30
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.09 E-value=3.8e-10 Score=89.36 Aligned_cols=68 Identities=16% Similarity=0.241 Sum_probs=54.9
Q ss_pred CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
..++++|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++.. +.....+.+|++|..+
T Consensus 4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~--~~~~~~~~~Dv~d~~~ 71 (296)
T PRK05872 4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG--DDRVLTVVADVTDLAA 71 (296)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC--CCcEEEEEecCCCHHH
Confidence 3457899999999999999999999999999999999999888777666532 2234456688887544
No 31
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.08 E-value=6.5e-10 Score=85.34 Aligned_cols=69 Identities=23% Similarity=0.329 Sum_probs=57.2
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
+++++|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++.+. +.....+.+|+.+..++
T Consensus 4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~ 72 (252)
T PRK07035 4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA-GGKAEALACHIGEMEQI 72 (252)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHH
Confidence 4678899999999999999999999999999999999988888777777543 33455678888876543
No 32
>PRK09186 flagellin modification protein A; Provisional
Probab=99.08 E-value=4.5e-10 Score=86.16 Aligned_cols=68 Identities=29% Similarity=0.372 Sum_probs=56.5
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCe-EEEEEcccCCCCCc
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ-HVVQNVMLAKGMKW 145 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~-~~~~~~dv~~~~~~ 145 (147)
+++|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++....+.. ..++.+|++|..++
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~ 70 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESL 70 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHH
Confidence 578999999999999999999999999999999999988888877776544333 44568999886543
No 33
>PLN02253 xanthoxin dehydrogenase
Probab=99.07 E-value=6.1e-10 Score=86.92 Aligned_cols=68 Identities=21% Similarity=0.217 Sum_probs=53.4
Q ss_pred CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
...+++|+++||||++|||.+++++|+++|++|++++|+.+..++..+++.. +....++.+|++|..+
T Consensus 13 ~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~ 80 (280)
T PLN02253 13 SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG--EPNVCFFHCDVTVEDD 80 (280)
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC--CCceEEEEeecCCHHH
Confidence 4467899999999999999999999999999999999988776665555521 2235567788877543
No 34
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.07 E-value=5.4e-10 Score=87.87 Aligned_cols=67 Identities=21% Similarity=0.383 Sum_probs=51.8
Q ss_pred CCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 77 ~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
.+.+|+++||||+ +|||+++++.|+++|++|++++|+++ .++.++++.++.+.. ..+.+|++|..++
T Consensus 2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v 70 (274)
T PRK08415 2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHF 70 (274)
T ss_pred ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHH
Confidence 4678999999997 89999999999999999999999853 334445554444443 5678999886543
No 35
>PRK09242 tropinone reductase; Provisional
Probab=99.07 E-value=8.3e-10 Score=85.05 Aligned_cols=71 Identities=34% Similarity=0.463 Sum_probs=58.8
Q ss_pred CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC-CeEEEEEcccCCCCC
Q 032110 74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVVQNVMLAKGMK 144 (147)
Q Consensus 74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~~~dv~~~~~ 144 (147)
..+.+++|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++...++ .....+.+|++++.+
T Consensus 3 ~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~ 74 (257)
T PRK09242 3 HRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDED 74 (257)
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHH
Confidence 34567899999999999999999999999999999999999888887777766532 345667889887654
No 36
>PRK06720 hypothetical protein; Provisional
Probab=99.06 E-value=8e-10 Score=81.62 Aligned_cols=68 Identities=22% Similarity=0.257 Sum_probs=56.1
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+.+++|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++.+. +....++.+|+++..+
T Consensus 12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~ 79 (169)
T PRK06720 12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL-GGEALFVSYDMEKQGD 79 (169)
T ss_pred cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHH
Confidence 4478999999999999999999999999999999999988887777777643 3334567889887543
No 37
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.06 E-value=8.1e-10 Score=84.98 Aligned_cols=71 Identities=27% Similarity=0.427 Sum_probs=59.5
Q ss_pred CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
+...+++|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++.+. +....++.+|++++.++
T Consensus 5 ~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~ 75 (256)
T PRK06124 5 QRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA-GGAAEALAFDIADEEAV 75 (256)
T ss_pred cccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc-CCceEEEEccCCCHHHH
Confidence 355688999999999999999999999999999999999998888877777653 44466789999886543
No 38
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.06 E-value=6.3e-10 Score=87.81 Aligned_cols=68 Identities=24% Similarity=0.290 Sum_probs=55.3
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh---------HHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA---------ERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
.+++|+++||||++|||+++++.|+++|++|++++++. +.+++..+++.+. +....++.+|++|++++
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dv~~~~~v 79 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA-GGEAVANGDDIADWDGA 79 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc-CCceEEEeCCCCCHHHH
Confidence 46789999999999999999999999999999998876 6677777777653 44456778899886543
No 39
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.06 E-value=6.1e-10 Score=86.33 Aligned_cols=66 Identities=21% Similarity=0.333 Sum_probs=55.7
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHH-HHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAER-VDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~-~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
++|+++||||++|||++++++|+++| ++|++++|+++. +++..+++.+..+....++.+|++|..+
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~ 74 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDS 74 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHH
Confidence 56799999999999999999999995 999999999886 8888888776544356778999998664
No 40
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.06 E-value=8e-10 Score=84.88 Aligned_cols=68 Identities=25% Similarity=0.403 Sum_probs=56.5
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+.+++|+++|||+++|||.+++++|+++|++|++++|+.+.+++..+++.+. +....++.+|+++..+
T Consensus 3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~ 70 (253)
T PRK06172 3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA-GGEALFVACDVTRDAE 70 (253)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCCCCHHH
Confidence 3578899999999999999999999999999999999998888777776543 4445677888887543
No 41
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.06 E-value=7.6e-10 Score=84.99 Aligned_cols=67 Identities=24% Similarity=0.433 Sum_probs=55.2
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+.+|+++||||++|||+++++.|+++|++|++++|+++.+++..+++... +.....+.+|++++..
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~ 68 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL-GRRALAVPTDITDEDQ 68 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh-CCceEEEecCCCCHHH
Confidence 367899999999999999999999999999999999998877776666543 3335677888887654
No 42
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.06 E-value=8.1e-10 Score=85.91 Aligned_cols=69 Identities=30% Similarity=0.385 Sum_probs=56.9
Q ss_pred CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
++.+++|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++..... ...++.+|++++.+
T Consensus 4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~ 72 (264)
T PRK07576 4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGP-EGLGVSADVRDYAA 72 (264)
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC-ceEEEECCCCCHHH
Confidence 3467899999999999999999999999999999999998887777666665433 34677899987554
No 43
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.05 E-value=9.2e-10 Score=84.87 Aligned_cols=70 Identities=16% Similarity=0.239 Sum_probs=55.4
Q ss_pred CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~-~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
++++++|+++|||+++|||++++++|+++|++|++++|+.+ .+++..+++... +.....+.+|++++.++
T Consensus 3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i 73 (254)
T PRK06114 3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA-GRRAIQIAADVTSKADL 73 (254)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-CCceEEEEcCCCCHHHH
Confidence 34688999999999999999999999999999999999764 456666666544 33455778999886543
No 44
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.05 E-value=6.3e-10 Score=87.23 Aligned_cols=67 Identities=18% Similarity=0.252 Sum_probs=51.1
Q ss_pred CCCCCEEEEeCCcC--hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 77 MLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 77 ~~~~k~~lVTG~s~--GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
.+++|+++|||+++ |||+++|++|+++|++|++.+|+.+..+ ..+++.++.+. ...+.+|++|..++
T Consensus 4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~-~~~~~~~~~g~-~~~~~~Dv~d~~~v 72 (271)
T PRK06505 4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGK-RVKPLAESLGS-DFVLPCDVEDIASV 72 (271)
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHH-HHHHHHHhcCC-ceEEeCCCCCHHHH
Confidence 47899999999996 9999999999999999999999864333 33444444343 34678899886543
No 45
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.05 E-value=1.1e-09 Score=88.19 Aligned_cols=63 Identities=22% Similarity=0.384 Sum_probs=54.9
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCC-eEEEEEcccCC
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVVQNVMLAK 141 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~-~~~~~~~dv~~ 141 (147)
.|++++||||++|||+++|++|+++|++|++++|+++++++..+++.+.++. ....+.+|+++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~ 115 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG 115 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC
Confidence 4789999999999999999999999999999999999999988888776543 34566788875
No 46
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.05 E-value=9.8e-10 Score=84.47 Aligned_cols=67 Identities=19% Similarity=0.331 Sum_probs=56.7
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+++|+++|||++++||..+++.|+++|++|++++|+++..++..+++.+. +....++.+|+++...
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~ 70 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA-GGKAIGVAMDVTNEDA 70 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc-CceEEEEECCCCCHHH
Confidence 467899999999999999999999999999999999998888887777553 4445677899887554
No 47
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.05 E-value=9.8e-10 Score=85.69 Aligned_cols=68 Identities=25% Similarity=0.336 Sum_probs=57.3
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+.+++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++... +.....+.+|++++.+
T Consensus 6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~ 73 (278)
T PRK08277 6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA-GGEALAVKADVLDKES 73 (278)
T ss_pred eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHH
Confidence 3578999999999999999999999999999999999988888777777543 4446678899988654
No 48
>PRK05599 hypothetical protein; Provisional
Probab=99.05 E-value=6.9e-10 Score=85.57 Aligned_cols=64 Identities=20% Similarity=0.247 Sum_probs=54.7
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
|+++|||+++|||+++++.|+ +|++|++++|+++++++..+++.+.++....++.+|++|..++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v 64 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTH 64 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHH
Confidence 478999999999999999999 5999999999999999888888765444456789999987654
No 49
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.04 E-value=8e-10 Score=85.53 Aligned_cols=63 Identities=35% Similarity=0.442 Sum_probs=49.4
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
.+++|+++|||+++|||+++++.|+++|++|++++|+++.+++..+++ +....++.+|+++..
T Consensus 3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~ 65 (263)
T PRK06200 3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF----GDHVLVVEGDVTSYA 65 (263)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCcceEEEccCCCHH
Confidence 467899999999999999999999999999999999987766544333 333455667776643
No 50
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.04 E-value=6.1e-10 Score=86.16 Aligned_cols=66 Identities=18% Similarity=0.325 Sum_probs=49.5
Q ss_pred CCCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 76 ~~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
..+++|+++|||++ +|||++++++|+++|++|++.+|+. +.++..+++. +.....+.+|+++..++
T Consensus 3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~---~~~~~~~~~Dl~~~~~v 70 (252)
T PRK06079 3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV---DEEDLLVECDVASDESI 70 (252)
T ss_pred cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc---cCceeEEeCCCCCHHHH
Confidence 34789999999999 8999999999999999999999983 4444334432 22345677888775543
No 51
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.04 E-value=6.7e-10 Score=86.82 Aligned_cols=66 Identities=18% Similarity=0.409 Sum_probs=52.2
Q ss_pred CCCCEEEEeCCcC--hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 78 LPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 78 ~~~k~~lVTG~s~--GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
+++|+++|||+++ |||+++++.|+++|++|++.+|+ +++++.++++....+. ...+.+|++|..++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~-~~~~~~Dl~~~~~v 71 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGS-DIVLPCDVAEDASI 71 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCC-ceEeecCCCCHHHH
Confidence 6889999999985 99999999999999999999987 3455556666655443 35678898886543
No 52
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.04 E-value=1.1e-09 Score=84.99 Aligned_cols=71 Identities=28% Similarity=0.315 Sum_probs=58.9
Q ss_pred CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
..+++.+|+++|||+++|||.+++++|+++|++|++.+|+.+.+++..+++... +....++.+|+++..++
T Consensus 4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~ 74 (265)
T PRK07097 4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL-GIEAHGYVCDVTDEDGV 74 (265)
T ss_pred cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHH
Confidence 345788999999999999999999999999999999999998888777776543 43466778999886543
No 53
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.04 E-value=8.4e-10 Score=88.21 Aligned_cols=67 Identities=25% Similarity=0.324 Sum_probs=55.0
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+.+|+++||||++|||+++++.|+++|++|++++|+.+++++..+++... +....++.+|+++..+
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~ 69 (322)
T PRK07453 3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP-PDSYTIIHIDLGDLDS 69 (322)
T ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc-CCceEEEEecCCCHHH
Confidence 457899999999999999999999999999999999998888777776432 3335667888887554
No 54
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.03 E-value=1.1e-09 Score=84.82 Aligned_cols=66 Identities=29% Similarity=0.427 Sum_probs=55.2
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+++|+++||||++|||.++++.|+++|++|++++|+++.+++...++ ..+....++.+|++|..+
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~d~~~ 67 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL--PYPGRHRWVVADLTSEAG 67 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--hcCCceEEEEccCCCHHH
Confidence 457889999999999999999999999999999999998887776666 234456677889988654
No 55
>PRK05717 oxidoreductase; Validated
Probab=99.03 E-value=1e-09 Score=84.59 Aligned_cols=66 Identities=24% Similarity=0.348 Sum_probs=50.1
Q ss_pred CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
+.+.++||+++|||+++|||.++++.|+++|++|++++|+.++.++..+++ +....++.+|+++..
T Consensus 4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~ 69 (255)
T PRK05717 4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL----GENAWFIAMDVADEA 69 (255)
T ss_pred CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc----CCceEEEEccCCCHH
Confidence 456788999999999999999999999999999999999876555433322 223445566666543
No 56
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.03 E-value=1.3e-09 Score=83.32 Aligned_cols=65 Identities=22% Similarity=0.333 Sum_probs=55.8
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
|+++||||++|||.+++++|+++|++|++++|+++..++..+++....+....++.+|++++.++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 66 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASH 66 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHH
Confidence 58999999999999999999999999999999998888777777665555567889999987653
No 57
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.02 E-value=1.3e-09 Score=83.32 Aligned_cols=66 Identities=24% Similarity=0.378 Sum_probs=54.2
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
++++|+++|||+++|||.++++.|+++|++|++++|+.+..++..+++. .+....++.+|++|..+
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~ 67 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA--AGGRAFARQGDVGSAEA 67 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh--cCCeEEEEEcCCCCHHH
Confidence 4678999999999999999999999999999999999887776666554 24445677888887543
No 58
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.01 E-value=1.1e-09 Score=85.27 Aligned_cols=67 Identities=21% Similarity=0.340 Sum_probs=51.6
Q ss_pred CCCCCEEEEeCC--cChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 77 MLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 77 ~~~~k~~lVTG~--s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
.+++|+++|||| ++|||+++|++|+++|++|++.+|++ +.++.++++..+.+. ...+.+|++|.+++
T Consensus 3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v 71 (261)
T PRK08690 3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDS-ELVFRCDVASDDEI 71 (261)
T ss_pred ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCC-ceEEECCCCCHHHH
Confidence 378899999996 78999999999999999999988763 444555566555444 34678898886554
No 59
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.01 E-value=1.3e-09 Score=83.08 Aligned_cols=67 Identities=19% Similarity=0.376 Sum_probs=54.8
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
++++|+++|||+++|||.++++.|+++|++|++++|+.+..++...++.. +....++.+|+.+..++
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~ 68 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA--GGRAIAVAADVSDEADV 68 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CCeEEEEECCCCCHHHH
Confidence 46788999999999999999999999999999999999887776666543 34456778888876543
No 60
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.01 E-value=1.6e-09 Score=84.01 Aligned_cols=67 Identities=28% Similarity=0.471 Sum_probs=56.0
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+++|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++... +....++.+|++++..
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~ 73 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA-GRRAHVVAADLAHPEA 73 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHH
Confidence 467899999999999999999999999999999999988887777776543 3345677888887654
No 61
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.01 E-value=1e-09 Score=85.32 Aligned_cols=63 Identities=24% Similarity=0.225 Sum_probs=49.7
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+++|+++||||++|||.++++.|+++|++|++.+|+++.+++..+++. ...++.+|+++..+
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~ 64 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-----LVVGGPLDVTDPAS 64 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----cceEEEccCCCHHH
Confidence 4678899999999999999999999999999999999887766544442 23455677766443
No 62
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.01 E-value=1e-09 Score=85.24 Aligned_cols=69 Identities=13% Similarity=0.301 Sum_probs=49.8
Q ss_pred CCCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHh-CCeEEEEEcccCCCCCc
Q 032110 76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-GEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 76 ~~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~~~dv~~~~~~ 145 (147)
+++.+|+++|||++ +|||++++++|+++|++|++.+|+... ++..+++.++. +.....+.+|++|+.++
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v 74 (257)
T PRK08594 3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTLEGQESLLLPCDVTSDEEI 74 (257)
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHcCCCceEEEecCCCCHHHH
Confidence 45789999999997 899999999999999999999875321 12223333332 23355678898886543
No 63
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.00 E-value=1.9e-09 Score=82.44 Aligned_cols=68 Identities=19% Similarity=0.343 Sum_probs=55.2
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+.+++|+++|||+++|||.++++.|+++|++|++++|+++..++..+++... +.....+.+|+++..+
T Consensus 2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~ 69 (250)
T PRK07774 2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD-GGTAIAVQVDVSDPDS 69 (250)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHH
Confidence 3467899999999999999999999999999999999987777766666543 3334567889887653
No 64
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.00 E-value=1.4e-09 Score=83.92 Aligned_cols=67 Identities=18% Similarity=0.232 Sum_probs=50.4
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
+++++|+++||||++|||++++++|+++|++|++++|+.. ++..+++.+ .+....++.+|++++.++
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~-~~~~~~~~~~Dl~~~~~~ 70 (251)
T PRK12481 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEA-LGRKFHFITADLIQQKDI 70 (251)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHH-cCCeEEEEEeCCCCHHHH
Confidence 3578999999999999999999999999999999988642 233333332 344456678888876543
No 65
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.00 E-value=1.2e-09 Score=84.61 Aligned_cols=62 Identities=24% Similarity=0.319 Sum_probs=47.2
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG 142 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~ 142 (147)
.+++|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+ ..+.....+.+|+.+.
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~----~~~~~~~~~~~D~~~~ 63 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA----AHGDAVVGVEGDVRSL 63 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----hcCCceEEEEeccCCH
Confidence 4678999999999999999999999999999999998766554322 2233344556666653
No 66
>PRK06196 oxidoreductase; Provisional
Probab=99.00 E-value=1.3e-09 Score=86.89 Aligned_cols=63 Identities=22% Similarity=0.299 Sum_probs=50.5
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
.++++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++.. ..++.+|++|..
T Consensus 22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~-----v~~~~~Dl~d~~ 84 (315)
T PRK06196 22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDG-----VEVVMLDLADLE 84 (315)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhh-----CeEEEccCCCHH
Confidence 346789999999999999999999999999999999998877666555421 345567776644
No 67
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=98.99 E-value=1.8e-09 Score=83.23 Aligned_cols=64 Identities=25% Similarity=0.394 Sum_probs=51.8
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+.+|+++|||+++|||.++++.|+++|++|++++|+.+..++..+++ +....++.+|++++.+
T Consensus 3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~ 66 (257)
T PRK07067 3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI----GPAAIAVSLDVTRQDS 66 (257)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh----CCceEEEEccCCCHHH
Confidence 467899999999999999999999999999999999988776655444 2235566788877544
No 68
>PRK06128 oxidoreductase; Provisional
Probab=98.99 E-value=7.7e-09 Score=81.98 Aligned_cols=69 Identities=26% Similarity=0.269 Sum_probs=51.3
Q ss_pred CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH--HHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE--RVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~--~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
...+++|+++||||++|||+++++.|+++|++|++.+++.+ ..++..+++.. .+....++.+|+++..+
T Consensus 50 ~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~ 120 (300)
T PRK06128 50 FGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQA-EGRKAVALPGDLKDEAF 120 (300)
T ss_pred ccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHH-cCCeEEEEecCCCCHHH
Confidence 33578999999999999999999999999999999887543 33444444443 34445667788877543
No 69
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.99 E-value=1.8e-09 Score=83.29 Aligned_cols=68 Identities=24% Similarity=0.294 Sum_probs=53.3
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
..+++|+++|||+++|||.++++.|+++|++|++++|+ +..++..+++.+ .+....++.+|++++.++
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i 78 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEK-EGRKVTFVQVDLTKPESA 78 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHh-cCCceEEEEcCCCCHHHH
Confidence 35789999999999999999999999999999999998 555555454443 344456778888876543
No 70
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=98.99 E-value=2.2e-09 Score=82.69 Aligned_cols=68 Identities=24% Similarity=0.353 Sum_probs=56.7
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+.+++|+++|||+++|||.++++.|+++|++|++++|+.+..++..+++... +....++.+|+++..+
T Consensus 7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~ 74 (255)
T PRK06113 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GGQAFACRCDITSEQE 74 (255)
T ss_pred cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHH
Confidence 3578999999999999999999999999999999999988888777777543 3345677899987654
No 71
>PRK07831 short chain dehydrogenase; Provisional
Probab=98.99 E-value=3.5e-09 Score=81.89 Aligned_cols=68 Identities=25% Similarity=0.357 Sum_probs=56.7
Q ss_pred CCCCCEEEEeCCcC-hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC-CeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTK-GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~-GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~~~dv~~~~~ 144 (147)
.+.+|+++|||+++ |||+++++.|+++|++|++.+|+.+++++..+++.+.++ ....++.+|++++.+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~ 83 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQ 83 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHH
Confidence 45689999999985 999999999999999999999999888888777776555 345677899987643
No 72
>PRK08628 short chain dehydrogenase; Provisional
Probab=98.98 E-value=1.8e-09 Score=83.18 Aligned_cols=67 Identities=25% Similarity=0.289 Sum_probs=54.6
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.++++|+++|||+++|||+++++.|+++|++|++++|+++.. +..+++.+. +....++.+|+++..+
T Consensus 3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~-~~~~~~~~~D~~~~~~ 69 (258)
T PRK08628 3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL-QPRAEFVQVDLTDDAQ 69 (258)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc-CCceEEEEccCCCHHH
Confidence 468899999999999999999999999999999999988766 555666544 3335677888887553
No 73
>PRK08251 short chain dehydrogenase; Provisional
Probab=98.98 E-value=2.3e-09 Score=81.93 Aligned_cols=65 Identities=25% Similarity=0.527 Sum_probs=54.9
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHh-CCeEEEEEcccCCCCC
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-GEQHVVQNVMLAKGMK 144 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~~~dv~~~~~ 144 (147)
+|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++.... +....++.+|+++..+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 67 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQ 67 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHH
Confidence 5789999999999999999999999999999999988887777776554 3346677899998654
No 74
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.98 E-value=3e-09 Score=80.99 Aligned_cols=67 Identities=28% Similarity=0.423 Sum_probs=55.5
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
++++|+++|||+++|||..++++|+++|++|++++|+.+..++...++.. .+....++.+|+++..+
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~ 70 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEA-YGVKVVIATADVSDYEE 70 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-hCCeEEEEECCCCCHHH
Confidence 35678999999999999999999999999999999998888777777643 34456677888887543
No 75
>PRK07677 short chain dehydrogenase; Provisional
Probab=98.98 E-value=2e-09 Score=82.81 Aligned_cols=65 Identities=28% Similarity=0.412 Sum_probs=54.1
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
+|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++.+. +....++.+|++++.++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~ 65 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF-PGQVLTVQMDVRNPEDV 65 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHH
Confidence 579999999999999999999999999999999988887776666543 34466788999886543
No 76
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.97 E-value=2.5e-09 Score=81.86 Aligned_cols=66 Identities=24% Similarity=0.383 Sum_probs=55.4
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+++|+++|||++++||.+++++|+++|++|++++|+.+..++...++... +....++.+|++++.+
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~ 67 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA-GGKAIGVAMDVTDEEA 67 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHH
Confidence 56789999999999999999999999999999999998888777776553 3345677889887654
No 77
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.97 E-value=1.8e-09 Score=83.87 Aligned_cols=68 Identities=21% Similarity=0.307 Sum_probs=51.0
Q ss_pred CCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChH--HHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAE--RVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 77 ~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~--~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
.+++|+++|||++ +|||++++++|+++|++|++.+++.+ ..++.++++.+... ...++.+|++|..++
T Consensus 3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v 74 (258)
T PRK07370 3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLN-PSLFLPCDVQDDAQI 74 (258)
T ss_pred ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccC-cceEeecCcCCHHHH
Confidence 4689999999986 89999999999999999999876543 34455555654432 345678888886544
No 78
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.97 E-value=1.8e-09 Score=84.72 Aligned_cols=67 Identities=19% Similarity=0.313 Sum_probs=50.2
Q ss_pred CCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 77 ~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
.+.+|+++|||++ +|||+++|+.|+++|++|++.+|++ ...+.++++.++.+. ...+.+|++|+.++
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~~~-~~~~~~Dl~~~~~v 75 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAELGA-FVAGHCDVTDEASI 75 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhcCC-ceEEecCCCCHHHH
Confidence 3578999999997 8999999999999999999998873 233344555444443 34578888876543
No 79
>PRK08703 short chain dehydrogenase; Provisional
Probab=98.97 E-value=3.3e-09 Score=80.88 Aligned_cols=65 Identities=23% Similarity=0.412 Sum_probs=52.9
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK 141 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~ 141 (147)
+|++|+++|||+++|||.++++.|+++|++|++++|+++.+++..+++.+..+....++.+|+++
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~ 67 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMS 67 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecc
Confidence 47789999999999999999999999999999999999888777777654433334556677764
No 80
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.97 E-value=3.4e-09 Score=84.45 Aligned_cols=69 Identities=17% Similarity=0.277 Sum_probs=55.0
Q ss_pred CCCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 74 ~~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
+..++++|+++|||+++|||++++++|+++|++|++.+++. +..++..+++.+. +....++.+|+++.+
T Consensus 6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~-g~~~~~~~~Dv~d~~ 75 (306)
T PRK07792 6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA-GAKAVAVAGDISQRA 75 (306)
T ss_pred CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc-CCeEEEEeCCCCCHH
Confidence 34568899999999999999999999999999999998753 4566666666543 444667788888754
No 81
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=98.97 E-value=2.6e-09 Score=82.25 Aligned_cols=65 Identities=14% Similarity=0.216 Sum_probs=55.1
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC-CeEEEEEcccCCCCC
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVVQNVMLAKGMK 144 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~~~dv~~~~~ 144 (147)
+|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++....+ ....++.+|++++.+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 67 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQS 67 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHH
Confidence 67999999999999999999999999999999998888877777766554 346678899987554
No 82
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=98.96 E-value=2.3e-09 Score=77.22 Aligned_cols=64 Identities=33% Similarity=0.421 Sum_probs=53.2
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC--hHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS--AERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~--~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
|+++||||++|||++++++|+++|+ +|++++|+ .+..++...++.... ....++.+|+++..++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~-~~~~~~~~D~~~~~~~ 67 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG-AKITFIECDLSDPESI 67 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT-SEEEEEESETTSHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc-cccccccccccccccc
Confidence 6899999999999999999999965 78888998 677777888887554 6677888999986543
No 83
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=98.96 E-value=3.3e-09 Score=81.77 Aligned_cols=70 Identities=24% Similarity=0.347 Sum_probs=56.9
Q ss_pred CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
.+++++|+++|||+++|||.++++.|+++|++|++++|+.+++++..+++... +....++.+|++|...+
T Consensus 7 ~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~~~~~~~~~Dl~d~~~i 76 (259)
T PRK08213 7 LFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL-GIDALWIAADVADEADI 76 (259)
T ss_pred hhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEccCCCHHHH
Confidence 34578999999999999999999999999999999999988877766666543 33455678898886543
No 84
>PRK06701 short chain dehydrogenase; Provisional
Probab=98.95 E-value=8e-09 Score=81.70 Aligned_cols=69 Identities=23% Similarity=0.254 Sum_probs=52.9
Q ss_pred CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~-~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
...+++|+++|||+++|||.+++++|+++|++|++++|+.+. .++..+++. ..+....++.+|+++...
T Consensus 41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~ 110 (290)
T PRK06701 41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVE-KEGVKCLLIPGDVSDEAF 110 (290)
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHH-hcCCeEEEEEccCCCHHH
Confidence 356789999999999999999999999999999999998643 444444443 334445677888887543
No 85
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.95 E-value=1.9e-09 Score=83.61 Aligned_cols=64 Identities=16% Similarity=0.268 Sum_probs=47.2
Q ss_pred CCCCCEEEEeCC--cChHHHHHHHHHHHCCCEEEEEeCCh--HHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSA--ERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~--s~GIG~~~a~~La~~Ga~V~i~~r~~--~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+++|+++|||+ ++|||+++++.|+++|++|++++|+. +.+++..+ +.+....++.+|++|..+
T Consensus 4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~ 71 (256)
T PRK07889 4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAK----RLPEPAPVLELDVTNEEH 71 (256)
T ss_pred cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHH----hcCCCCcEEeCCCCCHHH
Confidence 467899999999 89999999999999999999998764 22333322 223334466777777544
No 86
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.95 E-value=4e-09 Score=80.41 Aligned_cols=68 Identities=24% Similarity=0.311 Sum_probs=55.5
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
..+++|+++|||+++|||.++++.|+++|++|++++|+++++++..+++... +....++.+|+++..+
T Consensus 3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~ 70 (250)
T PRK12939 3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA-GGRAHAIAADLADPAS 70 (250)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHH
Confidence 3467899999999999999999999999999999999998887777776544 3335667788887543
No 87
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=98.95 E-value=3.5e-09 Score=81.61 Aligned_cols=65 Identities=25% Similarity=0.346 Sum_probs=50.1
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
.+++|+++|||+++|||++++++|+++|++|++++|++. .++..+++... +....++.+|+++..
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~ 69 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA-GGEALALTADLETYA 69 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc-CCeEEEEEEeCCCHH
Confidence 467899999999999999999999999999999999853 44444555433 333456778887754
No 88
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.95 E-value=3.8e-09 Score=80.24 Aligned_cols=45 Identities=49% Similarity=0.783 Sum_probs=40.3
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~ 121 (147)
.+.|.+++||||++|||+++|++|.+.|-+|++++|+++.+++..
T Consensus 2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~ 46 (245)
T COG3967 2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAK 46 (245)
T ss_pred cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHH
Confidence 457889999999999999999999999999999999988776543
No 89
>PRK06914 short chain dehydrogenase; Provisional
Probab=98.94 E-value=3.4e-09 Score=82.64 Aligned_cols=68 Identities=19% Similarity=0.237 Sum_probs=54.8
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHh-CCeEEEEEcccCCCCCc
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-GEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~~~dv~~~~~~ 145 (147)
|.+|+++||||++|||.++++.|+++|++|++++|+.+..++..+++.... +....++.+|++|..++
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~ 69 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSI 69 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHH
Confidence 357899999999999999999999999999999999888777666554432 23466778999886544
No 90
>PRK08278 short chain dehydrogenase; Provisional
Probab=98.94 E-value=3.2e-09 Score=83.04 Aligned_cols=67 Identities=25% Similarity=0.423 Sum_probs=52.7
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH-------HHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-------VDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
++++|+++|||+++|||.++++.|+++|++|++++|+.+. +++..+++... +....++.+|+++..+
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~D~~~~~~ 76 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA-GGQALPLVGDVRDEDQ 76 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc-CCceEEEEecCCCHHH
Confidence 4678999999999999999999999999999999997642 34444555443 4446677899888654
No 91
>PRK08643 acetoin reductase; Validated
Probab=98.94 E-value=3.9e-09 Score=81.18 Aligned_cols=64 Identities=25% Similarity=0.443 Sum_probs=53.2
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+|+++|||+++|||.++++.|+++|++|++++|+.+.+++...++... +....++.+|++++..
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~ 65 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD-GGKAIAVKADVSDRDQ 65 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHH
Confidence 689999999999999999999999999999999988887777766543 3445667888887643
No 92
>PRK06949 short chain dehydrogenase; Provisional
Probab=98.94 E-value=4.8e-09 Score=80.54 Aligned_cols=67 Identities=25% Similarity=0.362 Sum_probs=55.1
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+.+|+++|||+++|||+++++.|+++|++|++++|+.+.+++...++..... ...++.+|+++..+
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~ 72 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGG-AAHVVSLDVTDYQS 72 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHH
Confidence 47789999999999999999999999999999999999888777776654433 35567788877543
No 93
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.92 E-value=4.8e-09 Score=80.60 Aligned_cols=65 Identities=26% Similarity=0.347 Sum_probs=50.1
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~-r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
+++|+++|||+++|||.+++++|+++|++|++.+ ++.+..++...++... +.....+.+|+++..
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~ 67 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-GGSAFSIGANLESLH 67 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc-CCceEEEecccCCHH
Confidence 5689999999999999999999999999999875 5666666666666543 333455677777643
No 94
>PRK09135 pteridine reductase; Provisional
Probab=98.92 E-value=5.8e-09 Score=79.37 Aligned_cols=68 Identities=24% Similarity=0.187 Sum_probs=52.2
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~-~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
+.+++++|||++++||+.++++|+++|++|++++|+ .+..++...++....+....++.+|+++...+
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 72 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDAL 72 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHH
Confidence 466899999999999999999999999999999986 44455555555444444466778888876543
No 95
>PRK07024 short chain dehydrogenase; Provisional
Probab=98.92 E-value=2.5e-09 Score=82.61 Aligned_cols=63 Identities=25% Similarity=0.443 Sum_probs=50.4
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++... + ...++.+|+++..+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~Dl~~~~~ 64 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA-A-RVSVYAADVRDADA 64 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC-C-eeEEEEcCCCCHHH
Confidence 468999999999999999999999999999999988777665555322 2 35567888887543
No 96
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=98.92 E-value=4.8e-09 Score=79.91 Aligned_cols=66 Identities=21% Similarity=0.339 Sum_probs=54.7
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
++.+|+++|||++++||.++++.|+++|++|++++|+.++.++..+++... +....++.+|+.|..
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~ 68 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA-GGKARARQVDVRDRA 68 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHH
Confidence 356789999999999999999999999999999999988877777776554 333567788888754
No 97
>PRK05875 short chain dehydrogenase; Provisional
Probab=98.92 E-value=5.7e-09 Score=81.17 Aligned_cols=68 Identities=21% Similarity=0.335 Sum_probs=54.7
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC-CeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~~~dv~~~~~ 144 (147)
.+++|+++|||+++|||.++++.|+++|++|++++|+.+..++..+++....+ ....++.+|++++.+
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~ 72 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQ 72 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHH
Confidence 36789999999999999999999999999999999998877766666654322 335667888887654
No 98
>PRK06500 short chain dehydrogenase; Provisional
Probab=98.92 E-value=5.1e-09 Score=79.89 Aligned_cols=62 Identities=34% Similarity=0.472 Sum_probs=47.6
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG 142 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~ 142 (147)
.+++|+++|||+++|||.+++++|+++|++|++++|+.+.+++..+++ +....++.+|+++.
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~ 64 (249)
T PRK06500 3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL----GESALVIRADAGDV 64 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh----CCceEEEEecCCCH
Confidence 467899999999999999999999999999999999876655443332 33344556666654
No 99
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.91 E-value=5.3e-09 Score=79.94 Aligned_cols=66 Identities=21% Similarity=0.378 Sum_probs=53.4
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEE-EeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i-~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
|.+|+++|||+++|||+++++.|+++|++|++ .+|+.++.++..+++... +....++.+|++++.+
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~ 68 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL-GRKALAVKANVGDVEK 68 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHH
Confidence 46789999999999999999999999999876 578887777777776554 4445677899888654
No 100
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.91 E-value=6e-09 Score=79.46 Aligned_cols=67 Identities=19% Similarity=0.279 Sum_probs=55.2
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
++++++++|||+++|||..+++.|+++|++|++++|+.+++++..+++... +....++.+|+++...
T Consensus 2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~ 68 (253)
T PRK08217 2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL-GTEVRGYAANVTDEED 68 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCCCCHHH
Confidence 367899999999999999999999999999999999998887777766543 3345667888887543
No 101
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=98.91 E-value=4e-09 Score=84.40 Aligned_cols=65 Identities=25% Similarity=0.321 Sum_probs=52.8
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+|+++|||+++|||+++++.|+++| ++|++++|+.+++++..+++... +....++.+|+++..+
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~ 67 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMP-KDSYTIMHLDLGSLDS 67 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEEcCCCCHHH
Confidence 36799999999999999999999999 99999999998887776666422 3335567889887544
No 102
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=98.91 E-value=7.5e-09 Score=79.98 Aligned_cols=67 Identities=25% Similarity=0.357 Sum_probs=52.8
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
++++|+++||||++|||.++++.|+++|++|++.+|+. +..++..+++... +....++.+|+++...
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~ 71 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA-GGEAIAVKGDVTVESD 71 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-CCeEEEEEecCCCHHH
Confidence 47899999999999999999999999999999988854 4455555666543 4445677888887654
No 103
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.91 E-value=4e-09 Score=82.15 Aligned_cols=64 Identities=20% Similarity=0.274 Sum_probs=52.7
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++....+....++.+|++++.+
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 64 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDA 64 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHH
Confidence 4799999999999999999999999999999999888887777765544444556788887543
No 104
>PRK12746 short chain dehydrogenase; Provisional
Probab=98.91 E-value=5.9e-09 Score=79.95 Aligned_cols=68 Identities=24% Similarity=0.331 Sum_probs=53.5
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~-~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
++++|+++|||+++|||.++++.|+++|++|++. .|+.+..++..+++... +....++.+|++|..++
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~i 71 (254)
T PRK12746 3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN-GGKAFLIEADLNSIDGV 71 (254)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEEcCcCCHHHH
Confidence 4678899999999999999999999999998775 68877777666666432 33356778999886543
No 105
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=98.91 E-value=6.1e-09 Score=79.63 Aligned_cols=65 Identities=22% Similarity=0.332 Sum_probs=49.1
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
++++|+++|||+++|||.+++++|+++|++|++++|+.. ++..+++.+ .+....++.+|+++..+
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~-~~~~~~~~~~D~~~~~~ 66 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEA-LGRRFLSLTADLSDIEA 66 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHh-cCCceEEEECCCCCHHH
Confidence 478999999999999999999999999999999998752 233333332 23335567788877544
No 106
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=98.91 E-value=3.8e-09 Score=81.63 Aligned_cols=61 Identities=38% Similarity=0.633 Sum_probs=51.3
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+++|||+++|||++++++|+++|++|++++|+++.+++..+++.+. + ...++.+|++|.++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~Dv~d~~~ 62 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY-G-EVYAVKADLSDKDD 62 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-C-CceEEEcCCCCHHH
Confidence 6899999999999999999999999999999998888887777543 3 34567888887554
No 107
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=98.89 E-value=7.6e-09 Score=78.97 Aligned_cols=66 Identities=20% Similarity=0.322 Sum_probs=53.8
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+++|+++|||++++||.+++++|+++|++|++++|+.+..++..+++... +....++.+|+++..+
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~ 66 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK-GGNAQAFACDITDRDS 66 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHH
Confidence 46789999999999999999999999999999999988877766666543 3345667888877543
No 108
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.88 E-value=9.3e-09 Score=78.61 Aligned_cols=67 Identities=28% Similarity=0.410 Sum_probs=51.5
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~-~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
++++|+++|||+++|||.++++.|+++|++|++++|+.+ ..++...++... +.....+.+|+++..+
T Consensus 3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~ 70 (248)
T PRK07806 3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA-GGRASAVGADLTDEES 70 (248)
T ss_pred CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc-CCceEEEEcCCCCHHH
Confidence 367889999999999999999999999999999999754 445555555443 3335667888887554
No 109
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.88 E-value=7.8e-09 Score=78.43 Aligned_cols=64 Identities=28% Similarity=0.419 Sum_probs=52.5
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
+.+++++|||++|+||..++++|+++|++|++++|+++.+++..+++.+. ....++.+|+++..
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~D~~~~~ 67 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK--GNVLGLAADVRDEA 67 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc--CcEEEEEccCCCHH
Confidence 56789999999999999999999999999999999988877776666543 23556777877654
No 110
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=98.88 E-value=8.8e-09 Score=80.03 Aligned_cols=64 Identities=20% Similarity=0.262 Sum_probs=51.7
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
++++|||+++|||++++++|+++|++|++++| +.+.+++..+++....+....++.+|++|...
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~ 66 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSAT 66 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchh
Confidence 48999999999999999999999999999765 45677777677755445556678999999753
No 111
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.87 E-value=7.5e-09 Score=78.17 Aligned_cols=65 Identities=22% Similarity=0.246 Sum_probs=49.8
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
+.+++|+++|||++++||..+++.|+++|++|++++|+.++.++..+++... ...++.+|+.|..
T Consensus 3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~D~~~~~ 67 (239)
T PRK12828 3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD---ALRIGGIDLVDPQ 67 (239)
T ss_pred CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc---CceEEEeecCCHH
Confidence 3577899999999999999999999999999999999887766555554332 1234456666543
No 112
>PRK08226 short chain dehydrogenase; Provisional
Probab=98.87 E-value=1e-08 Score=79.16 Aligned_cols=66 Identities=26% Similarity=0.383 Sum_probs=51.3
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+.+|+++|||+++|||+++++.|+++|++|++++|+.+ ..+..+++... +....++.+|++++.+
T Consensus 3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~-~~~~~~~~~Dl~~~~~ 68 (263)
T PRK08226 3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR-GHRCTAVVADVRDPAS 68 (263)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh-CCceEEEECCCCCHHH
Confidence 467899999999999999999999999999999999874 44444555433 3334567888887654
No 113
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=98.87 E-value=8.2e-09 Score=82.80 Aligned_cols=50 Identities=26% Similarity=0.387 Sum_probs=43.8
Q ss_pred CCCCCCCEEEEeCC--cChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Q 032110 75 EPMLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125 (147)
Q Consensus 75 ~~~~~~k~~lVTG~--s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~ 125 (147)
.++++||+++|||+ ++|||+++|+.|+++|++|++ +|+.+.+++...++.
T Consensus 4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~ 55 (303)
T PLN02730 4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLR 55 (303)
T ss_pred CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhh
Confidence 34589999999999 899999999999999999998 788888887776664
No 114
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.87 E-value=8.2e-09 Score=80.32 Aligned_cols=66 Identities=24% Similarity=0.393 Sum_probs=47.7
Q ss_pred CCCCEEEEeCC--cChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 78 LPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 78 ~~~k~~lVTG~--s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
+++|+++|||| ++|||++++++|+++|++|++.+|.. ..++..+++.++.+.. ..+.+|++|++++
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v 71 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAEFGSD-LVFPCDVASDEQI 71 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccch-HHHHHHHHHHHhcCCc-ceeeccCCCHHHH
Confidence 67899999996 68999999999999999999987642 2223334444443432 4577888876554
No 115
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.86 E-value=1.2e-08 Score=77.26 Aligned_cols=67 Identities=25% Similarity=0.389 Sum_probs=54.0
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
++.+|+++|||++++||..+++.|+++|++|++++|+++..++...++... +....++.+|+++...
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~ 68 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA-GGEARVLVFDVSDEAA 68 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCceEEEEccCCCHHH
Confidence 456789999999999999999999999999999999988877766666543 3335566788887543
No 116
>PRK07985 oxidoreductase; Provisional
Probab=98.86 E-value=1.8e-08 Score=79.85 Aligned_cols=67 Identities=25% Similarity=0.325 Sum_probs=50.3
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh--HHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA--ERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~--~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
++++|+++|||+++|||+++++.|+++|++|++.+|+. +..++..+.+. ..+....++.+|+++...
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~ 114 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIE-ECGRKAVLLPGDLSDEKF 114 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHH-HcCCeEEEEEccCCCHHH
Confidence 57899999999999999999999999999999988653 33444433333 334445667888887543
No 117
>PRK06484 short chain dehydrogenase; Validated
Probab=98.86 E-value=1.3e-08 Score=86.04 Aligned_cols=64 Identities=33% Similarity=0.535 Sum_probs=51.0
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
...+|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++ +.....+.+|++|+.+
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~ 329 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL----GDEHLSVQADITDEAA 329 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEccCCCHHH
Confidence 457899999999999999999999999999999999987776554433 3334556777777543
No 118
>PRK06198 short chain dehydrogenase; Provisional
Probab=98.86 E-value=1e-08 Score=78.84 Aligned_cols=67 Identities=30% Similarity=0.512 Sum_probs=54.6
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~-V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+++|+++|||+++|||..+++.|+++|++ |++++|+.+..++...++.+ .+....++.+|++++..
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~ 70 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEA-LGAKAVFVQADLSDVED 70 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHh-cCCeEEEEEccCCCHHH
Confidence 468899999999999999999999999998 99999998777766666643 34445667888887543
No 119
>PRK07454 short chain dehydrogenase; Provisional
Probab=98.86 E-value=1.3e-08 Score=77.55 Aligned_cols=65 Identities=29% Similarity=0.413 Sum_probs=53.4
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
++|+++|||+++|||..++++|+++|++|++++|+++..++..+++.+. +....++.+|+++..+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~ 69 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST-GVKAAAYSIDLSNPEA 69 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC-CCcEEEEEccCCCHHH
Confidence 4579999999999999999999999999999999998877776666543 3345677899988653
No 120
>PRK12937 short chain dehydrogenase; Provisional
Probab=98.85 E-value=1.4e-08 Score=77.33 Aligned_cols=66 Identities=21% Similarity=0.342 Sum_probs=49.0
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~-~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
++++|+++|||+++|||+.+++.|+++|++|+++.++.+ ..++..+++.. .+....++.+|+++..
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~ 68 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEA-AGGRAIAVQADVADAA 68 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHH
Confidence 567899999999999999999999999999988876543 34444444443 2344556677777643
No 121
>PRK07856 short chain dehydrogenase; Provisional
Probab=98.85 E-value=7.1e-09 Score=79.74 Aligned_cols=64 Identities=38% Similarity=0.568 Sum_probs=49.0
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH-------------------HHHHHHHHHHHhCCeEEEEE
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-------------------VDSAVQSLREEFGEQHVVQN 136 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~-------------------~~~~~~~l~~~~~~~~~~~~ 136 (147)
+++++|+++||||++|||+++++.|+++|++|++++|+.+. .++.++++.+.++..+++++
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 81 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVN 81 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhhhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 35789999999999999999999999999999999987632 23334444555566666666
Q ss_pred ccc
Q 032110 137 VML 139 (147)
Q Consensus 137 ~dv 139 (147)
+..
T Consensus 82 ~ag 84 (252)
T PRK07856 82 NAG 84 (252)
T ss_pred CCC
Confidence 554
No 122
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=98.85 E-value=9.2e-09 Score=79.47 Aligned_cols=63 Identities=24% Similarity=0.395 Sum_probs=53.1
Q ss_pred EEEEeCCcChHHHHHHHHHHH----CCCEEEEEeCChHHHHHHHHHHHHHh-CCeEEEEEcccCCCCC
Q 032110 82 NVLITGSTKGIGYALAKEFLK----AGDNVIICSRSAERVDSAVQSLREEF-GEQHVVQNVMLAKGMK 144 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~----~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~~~dv~~~~~ 144 (147)
+++|||+++|||++++++|++ .|++|++++|+++.+++..+++.... +....++.+|+++..+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~ 69 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAG 69 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHH
Confidence 689999999999999999997 79999999999999888888886533 3345678899988654
No 123
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.85 E-value=1.3e-08 Score=77.29 Aligned_cols=66 Identities=27% Similarity=0.314 Sum_probs=53.6
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+.+|+++|||+++|||..+++.|+++|++|++++|+++..++..+++... + ...++.+|+++..+
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~Dl~~~~~ 67 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-G-NIHYVVGDVSSTES 67 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEECCCCCHHH
Confidence 367889999999999999999999999999999999988777665555432 3 35667899887553
No 124
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.85 E-value=6.4e-09 Score=80.13 Aligned_cols=44 Identities=30% Similarity=0.413 Sum_probs=39.2
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~ 121 (147)
+++|+++|||+++|||.+++++|+++|++|++++|+....++..
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~ 48 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAA 48 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 67899999999999999999999999999999999876655443
No 125
>PRK06101 short chain dehydrogenase; Provisional
Probab=98.85 E-value=7.6e-09 Score=79.22 Aligned_cols=59 Identities=31% Similarity=0.395 Sum_probs=47.1
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
|+++|||+++|||.++++.|+++|++|++++|+++.+++..+ ... ...++.+|+++..+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~-~~~~~~~D~~~~~~ 60 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----QSA-NIFTLAFDVTDHPG 60 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----hcC-CCeEEEeeCCCHHH
Confidence 689999999999999999999999999999999876654432 222 34567888887654
No 126
>PRK08267 short chain dehydrogenase; Provisional
Probab=98.84 E-value=9.3e-09 Score=79.33 Aligned_cols=61 Identities=20% Similarity=0.195 Sum_probs=49.6
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++. +....++.+|+++..+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~ 62 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG---AGNAWTGALDVTDRAA 62 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHH
Confidence 689999999999999999999999999999999887776655443 3345667888877543
No 127
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.84 E-value=1.3e-08 Score=89.41 Aligned_cols=70 Identities=19% Similarity=0.347 Sum_probs=57.7
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCC-eEEEEEcccCCCCCc
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVVQNVMLAKGMKW 145 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~-~~~~~~~dv~~~~~~ 145 (147)
..+.+|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++....+. ....+.+|+++..++
T Consensus 410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v 480 (676)
T TIGR02632 410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAV 480 (676)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHH
Confidence 3478999999999999999999999999999999999998887777777655432 356678999886543
No 128
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=98.84 E-value=3.4e-09 Score=80.07 Aligned_cols=66 Identities=21% Similarity=0.280 Sum_probs=52.5
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
++..|+++||||++|||+++++.|+.+|++|++.+++.+..++.+..|.. .+.+..+.||+.+..+
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g--~~~h~aF~~DVS~a~~ 76 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG--YGDHSAFSCDVSKAHD 76 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC--CCccceeeeccCcHHH
Confidence 46778999999999999999999999999999999988776666655532 1345667777776544
No 129
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=98.84 E-value=1.8e-08 Score=77.19 Aligned_cols=64 Identities=25% Similarity=0.432 Sum_probs=52.1
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLA 140 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~ 140 (147)
.+++|+++|||+++|||..+++.|+++|++|++++|+.+.+++..+++.+.......++.+|+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~ 72 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLL 72 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEeccc
Confidence 4689999999999999999999999999999999999888877777776543333445556664
No 130
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.84 E-value=1.6e-08 Score=76.78 Aligned_cols=67 Identities=24% Similarity=0.394 Sum_probs=54.6
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~-~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+.+|+++|||+++|||.++++.|+++|++|+++ +|+.+..++..+++... +....++.+|+++..+
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~ 69 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE-GGDAIAVKADVSSEED 69 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHH
Confidence 3667899999999999999999999999999998 99888777776666543 3345677888887553
No 131
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.83 E-value=1.2e-08 Score=88.44 Aligned_cols=68 Identities=31% Similarity=0.399 Sum_probs=57.1
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
..+++|+++||||++|||.++++.|+++|++|++++|+++.+++..+++... +....++.+|++|..+
T Consensus 367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~ 434 (657)
T PRK07201 367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK-GGTAHAYTCDLTDSAA 434 (657)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEecCCCHHH
Confidence 3578899999999999999999999999999999999998888877777554 3345677888887554
No 132
>PRK05650 short chain dehydrogenase; Provisional
Probab=98.83 E-value=1.3e-08 Score=79.18 Aligned_cols=63 Identities=24% Similarity=0.366 Sum_probs=53.4
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
|+++|||+++|||+++++.|+++|++|++.+|+.+.+++...++... +....++.+|++++.+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~ 63 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA-GGDGFYQRCDVRDYSQ 63 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEccCCCHHH
Confidence 47899999999999999999999999999999998888887777654 3345677889987543
No 133
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=98.83 E-value=1.6e-08 Score=77.95 Aligned_cols=66 Identities=17% Similarity=0.205 Sum_probs=48.0
Q ss_pred CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
.+++++|+++|||+++|||.+++++|+++|++|++.+++.. ++..+++... +.....+.+|++|.+
T Consensus 5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~-~~~~~~~~~Dl~~~~ 70 (253)
T PRK08993 5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL-GRRFLSLTADLRKID 70 (253)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc-CCeEEEEECCCCCHH
Confidence 34678999999999999999999999999999998877542 2333344322 333456677777643
No 134
>PRK06484 short chain dehydrogenase; Validated
Probab=98.83 E-value=1.1e-08 Score=86.49 Aligned_cols=62 Identities=32% Similarity=0.528 Sum_probs=48.2
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
..+|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++ +.....+.+|++++.
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~ 64 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL----GPDHHALAMDVSDEA 64 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEeccCCHH
Confidence 46889999999999999999999999999999999887766554443 223345566666543
No 135
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=98.83 E-value=1.4e-08 Score=77.46 Aligned_cols=66 Identities=15% Similarity=0.196 Sum_probs=48.0
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~-~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
|++|+++|||+++|||+++++.|+++|++|++. +++....++..+++... +....++.+|++|..+
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~ 67 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL-GFDFIASEGNVGDWDS 67 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc-CCcEEEEEcCCCCHHH
Confidence 468999999999999999999999999998885 44555555555555432 3334556777776543
No 136
>PRK06398 aldose dehydrogenase; Validated
Probab=98.82 E-value=2.9e-08 Score=76.91 Aligned_cols=64 Identities=22% Similarity=0.323 Sum_probs=52.6
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH----------------HHHHHHHHHHHHhCCeEEEEEcccC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE----------------RVDSAVQSLREEFGEQHVVQNVMLA 140 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~----------------~~~~~~~~l~~~~~~~~~~~~~dv~ 140 (147)
++++|+++|||+++|||+++++.|+++|++|++++|+++ ..+++++++.++++..++++++...
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~ 82 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGI 82 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 477899999999999999999999999999999887643 3455666777777888888887653
No 137
>PRK12743 oxidoreductase; Provisional
Probab=98.81 E-value=2e-08 Score=77.50 Aligned_cols=64 Identities=20% Similarity=0.250 Sum_probs=49.7
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+|+++||||++|||+++++.|+++|++|+++++ +.+.+++..+++.. .+....++.+|+++..+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~ 66 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRS-HGVRAEIRQLDLSDLPE 66 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-cCCceEEEEccCCCHHH
Confidence 578999999999999999999999999988865 55556666555544 34456677888887543
No 138
>PRK07775 short chain dehydrogenase; Provisional
Probab=98.81 E-value=2.7e-08 Score=77.73 Aligned_cols=67 Identities=25% Similarity=0.344 Sum_probs=53.8
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+.+|+++|||+++|||.++++.|+++|++|++++|+.+.+++...++... +....++.+|+++..+
T Consensus 7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~ 73 (274)
T PRK07775 7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD-GGEAVAFPLDVTDPDS 73 (274)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHH
Confidence 356789999999999999999999999999999999887777666665543 3345667889887654
No 139
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=98.81 E-value=2e-08 Score=76.26 Aligned_cols=63 Identities=24% Similarity=0.327 Sum_probs=47.4
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
++++|+++|||+++|||+++++.|+++|+.|++.+|+.+.+++...++ +....++.+|+++..
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~ 65 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL----GERVKIFPANLSDRD 65 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CCceEEEEccCCCHH
Confidence 567899999999999999999999999999999988877665543322 222344556666543
No 140
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.81 E-value=1.8e-08 Score=76.97 Aligned_cols=63 Identities=22% Similarity=0.495 Sum_probs=45.4
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
++++|+++|||+++|||+++++.|+++|++|++.++ +.+..++... +.+....++.+|+++..
T Consensus 2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~ 65 (253)
T PRK08642 2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALAD----ELGDRAIALQADVTDRE 65 (253)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH----HhCCceEEEEcCCCCHH
Confidence 467889999999999999999999999999988765 4443333322 22333455667776644
No 141
>PRK05855 short chain dehydrogenase; Validated
Probab=98.80 E-value=2e-08 Score=85.05 Aligned_cols=68 Identities=19% Similarity=0.273 Sum_probs=57.0
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
..+.+++++||||++|||.+++++|+++|++|++++|+.+.+++..+++... +....++.+|++|...
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~ 378 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA-GAVAHAYRVDVSDADA 378 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHH
Confidence 3466789999999999999999999999999999999998888887777654 3446677899988654
No 142
>PRK06940 short chain dehydrogenase; Provisional
Probab=98.80 E-value=1.9e-08 Score=78.85 Aligned_cols=63 Identities=29% Similarity=0.422 Sum_probs=51.3
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
+|+++|||+ +|||+++++.|+ +|++|++++|+.+.+++..+++... +....++.+|++|..++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~i 64 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA-GFDVSTQEVDVSSRESV 64 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEeecCCHHHH
Confidence 578999997 699999999996 8999999999988888777777543 33456788999986543
No 143
>PRK06182 short chain dehydrogenase; Validated
Probab=98.80 E-value=1.2e-08 Score=79.44 Aligned_cols=41 Identities=27% Similarity=0.446 Sum_probs=37.2
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
++|+++|||+++|||++++++|+++|++|++++|+.+++++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~ 42 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMED 42 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 57899999999999999999999999999999998876543
No 144
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.79 E-value=1.8e-08 Score=78.75 Aligned_cols=61 Identities=25% Similarity=0.213 Sum_probs=46.7
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
.+|+++|||+++|||.+++++|+++|++|++++|+.+.+++..+ ..+.....+.+|++|+.
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~----~~~~~~~~~~~D~~d~~ 63 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA----LHPDRALARLLDVTDFD 63 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHh----hcCCCeeEEEccCCCHH
Confidence 46799999999999999999999999999999998876543322 22333455667776644
No 145
>PRK06841 short chain dehydrogenase; Provisional
Probab=98.79 E-value=2.3e-08 Score=76.76 Aligned_cols=64 Identities=23% Similarity=0.265 Sum_probs=47.1
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
+++++|+++|||+++|||.++++.|+++|++|++++|+.+.. +...++. +.....+.+|+++..
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~---~~~~~~~~~Dl~~~~ 74 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL---GGNAKGLVCDVSDSQ 74 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh---CCceEEEEecCCCHH
Confidence 568899999999999999999999999999999999987532 2222221 222335566666544
No 146
>PRK08263 short chain dehydrogenase; Provisional
Probab=98.79 E-value=1.8e-08 Score=78.63 Aligned_cols=62 Identities=19% Similarity=0.360 Sum_probs=48.0
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+|+++|||+++|||+.++++|+++|++|++++|+.+.+++..++ .+....++.+|++++.+
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~~ 63 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEK----YGDRLLPLALDVTDRAA 63 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh----ccCCeeEEEccCCCHHH
Confidence 468999999999999999999999999999999998776544332 23334556777776543
No 147
>PRK09291 short chain dehydrogenase; Provisional
Probab=98.79 E-value=2.2e-08 Score=76.85 Aligned_cols=64 Identities=25% Similarity=0.355 Sum_probs=50.8
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+|+++|||+++|||.++++.|+++|++|++++|+.+..++..+..... +....++.+|+++..+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~ 65 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR-GLALRVEKLDLTDAID 65 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcceEEEeeCCCHHH
Confidence 568999999999999999999999999999999987776655544433 3335667888887543
No 148
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.79 E-value=3.2e-08 Score=74.96 Aligned_cols=66 Identities=26% Similarity=0.373 Sum_probs=49.4
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~-~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
++++|+++|||++++||.++++.|+++|++|++..|+.+. .++..+++... +....++.+|+++..
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~ 68 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL-GGKALAVQGDVSDAE 68 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-CCceEEEEcCCCCHH
Confidence 4678899999999999999999999999999888776543 44444444332 344566677877754
No 149
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=98.78 E-value=3.4e-08 Score=75.42 Aligned_cols=67 Identities=27% Similarity=0.365 Sum_probs=51.7
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
++++|+++|||+++|||.+++++|+++|++|++..+ +++..++..+++... +....++.+|++++..
T Consensus 3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~ 70 (247)
T PRK12935 3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE-GHDVYAVQADVSKVED 70 (247)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc-CCeEEEEECCCCCHHH
Confidence 367899999999999999999999999999987654 455666665666543 3446778899887543
No 150
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.78 E-value=3.4e-08 Score=76.35 Aligned_cols=68 Identities=21% Similarity=0.253 Sum_probs=50.1
Q ss_pred CCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeCC-----------hHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRS-----------AERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 77 ~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
.+++|+++|||++ +|||+++|++|+++|++|+++++. .+..++..+++.+ .+....++.+|+++.+
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~D~~~~~ 81 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK-NGVKVSSMELDLTQND 81 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHh-cCCeEEEEEcCCCCHH
Confidence 5789999999998 499999999999999999987642 2233334444443 3445667789998865
Q ss_pred Cc
Q 032110 144 KW 145 (147)
Q Consensus 144 ~~ 145 (147)
++
T Consensus 82 ~i 83 (256)
T PRK12859 82 AP 83 (256)
T ss_pred HH
Confidence 43
No 151
>PRK12744 short chain dehydrogenase; Provisional
Probab=98.78 E-value=3.1e-08 Score=76.36 Aligned_cols=67 Identities=19% Similarity=0.317 Sum_probs=49.5
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC----hHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS----AERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~----~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+++|+++|||+++|||.++++.|+++|++|++++++ .+..++..+++... +....++.+|+++..+
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~ 75 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA-GAKAVAFQADLTTAAA 75 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh-CCcEEEEecCcCCHHH
Confidence 4678999999999999999999999999997776543 33444555555433 3345667899887654
No 152
>PRK06181 short chain dehydrogenase; Provisional
Probab=98.77 E-value=3e-08 Score=76.51 Aligned_cols=64 Identities=30% Similarity=0.483 Sum_probs=52.9
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+++++|||+++|||.++++.|+++|++|++++|+.+..++..+++... +....++.+|+.+...
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~ 64 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH-GGEALVVPTDVSDAEA 64 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccCCCHHH
Confidence 468999999999999999999999999999999988877776666553 4446677888887543
No 153
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.77 E-value=2.1e-08 Score=77.07 Aligned_cols=66 Identities=27% Similarity=0.402 Sum_probs=50.8
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
..+++|+++|||+++|||..+++.|+++|++|++++|+.+..++..++.... ...++.+|++++..
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~ 72 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA---KVTATVADVADPAQ 72 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC---ceEEEEccCCCHHH
Confidence 4578899999999999999999999999999999999887665544433211 24566777776543
No 154
>PRK09134 short chain dehydrogenase; Provisional
Probab=98.77 E-value=4.9e-08 Score=75.29 Aligned_cols=66 Identities=24% Similarity=0.376 Sum_probs=50.4
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
..+|+++|||+++|||+++++.|+++|++|+++++ +.+.+++...++... +....++.+|++|...
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~ 73 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL-GRRAVALQADLADEAE 73 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHH
Confidence 35789999999999999999999999999988766 445555555555443 3345667888887543
No 155
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=98.77 E-value=3e-08 Score=75.90 Aligned_cols=63 Identities=21% Similarity=0.361 Sum_probs=52.0
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++... +....++.+|++++..
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~ 63 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA-GGKAVAYKLDVSDKDQ 63 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHH
Confidence 58999999999999999999999999999999988777776666543 4445677888887554
No 156
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=98.76 E-value=1.3e-08 Score=78.42 Aligned_cols=67 Identities=25% Similarity=0.300 Sum_probs=52.2
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCe-EEEEEcccCCCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ-HVVQNVMLAKGM 143 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~-~~~~~~dv~~~~ 143 (147)
++++||.+++||+.+|||++++++|+++|..+.+++.+.|. -++.++|++.++.. .+++++||++..
T Consensus 1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~~~v~F~~~DVt~~~ 68 (261)
T KOG4169|consen 1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPSVSVIFIKCDVTNRG 68 (261)
T ss_pred CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCCceEEEEEeccccHH
Confidence 46789999999999999999999999999887777766665 34556676666655 455678887743
No 157
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.76 E-value=2e-08 Score=78.58 Aligned_cols=41 Identities=32% Similarity=0.422 Sum_probs=36.9
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
.+|+++||||++|||+++++.|+++|++|++++|+.+.+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~ 43 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAA 43 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 35799999999999999999999999999999999876543
No 158
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=98.76 E-value=6.2e-08 Score=74.95 Aligned_cols=65 Identities=29% Similarity=0.409 Sum_probs=52.5
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH------------------HHHHHHHHHHHHhCCeEEEEEc
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE------------------RVDSAVQSLREEFGEQHVVQNV 137 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~------------------~~~~~~~~l~~~~~~~~~~~~~ 137 (147)
..+++|+++|||+++|||+++++.|+++|++|++.+++.+ ..++.++++.+.++..+.++++
T Consensus 5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ 84 (266)
T PRK06171 5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNN 84 (266)
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4578999999999999999999999999999999887542 3445566666677788888887
Q ss_pred ccC
Q 032110 138 MLA 140 (147)
Q Consensus 138 dv~ 140 (147)
...
T Consensus 85 Ag~ 87 (266)
T PRK06171 85 AGI 87 (266)
T ss_pred Ccc
Confidence 653
No 159
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.76 E-value=2.4e-08 Score=76.90 Aligned_cols=39 Identities=41% Similarity=0.568 Sum_probs=34.7
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
.++.+|+++|||+++|||+++++.|+++|++|++.+++.
T Consensus 3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~ 41 (255)
T PRK06463 3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA 41 (255)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc
Confidence 346789999999999999999999999999999887654
No 160
>PRK06523 short chain dehydrogenase; Provisional
Probab=98.75 E-value=7e-08 Score=74.34 Aligned_cols=64 Identities=30% Similarity=0.433 Sum_probs=50.2
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH------------------HHHHHHHHHHHHhCCeEEEEEc
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE------------------RVDSAVQSLREEFGEQHVVQNV 137 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~------------------~~~~~~~~l~~~~~~~~~~~~~ 137 (147)
..+++|+++|||+++|||.+++++|+++|++|++++|+.+ ..++..+++.+.++..++++++
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ 84 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHV 84 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4578999999999999999999999999999999998643 2333445555666777777776
Q ss_pred cc
Q 032110 138 ML 139 (147)
Q Consensus 138 dv 139 (147)
..
T Consensus 85 ag 86 (260)
T PRK06523 85 LG 86 (260)
T ss_pred Cc
Confidence 54
No 161
>PRK07074 short chain dehydrogenase; Provisional
Probab=98.75 E-value=3.2e-08 Score=76.10 Aligned_cols=62 Identities=31% Similarity=0.431 Sum_probs=50.1
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+|+++|||+++|||.++++.|+++|++|++++|+.+..++..+++. +....++.+|+.+..+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~ 63 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG---DARFVPVACDLTDAAS 63 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHH
Confidence 5789999999999999999999999999999999887776655552 2234567888877554
No 162
>PRK08264 short chain dehydrogenase; Validated
Probab=98.75 E-value=2.6e-08 Score=75.73 Aligned_cols=60 Identities=27% Similarity=0.411 Sum_probs=46.7
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
+.+.+|+++||||++|||.++++.|+++|+ +|++++|+.+++++ .+....++.+|+.+..
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------~~~~~~~~~~D~~~~~ 62 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------LGPRVVPLQLDVTDPA 62 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------cCCceEEEEecCCCHH
Confidence 346788999999999999999999999999 99999998766542 2333455566666543
No 163
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=98.74 E-value=3.7e-08 Score=75.25 Aligned_cols=64 Identities=23% Similarity=0.348 Sum_probs=52.1
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+|+++|||++++||..+++.|+++|++|++++|+.+..++..+++... +....++.+|+.+..+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~ 64 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA-GGSVIYLVADVTKEDE 64 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEECCCCCHHH
Confidence 468999999999999999999999999999999988777766665432 3445677888887653
No 164
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.74 E-value=3.4e-08 Score=75.58 Aligned_cols=66 Identities=23% Similarity=0.426 Sum_probs=49.5
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHHHHHHhC-CeEEEEEcccCC-CC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER--VDSAVQSLREEFG-EQHVVQNVMLAK-GM 143 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~--~~~~~~~l~~~~~-~~~~~~~~dv~~-~~ 143 (147)
++.+|+++|||+++|||+++|+.|+++|++|++..++.+. .++..++.. ..+ .......+|+++ ..
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~ 71 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEE 71 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHH
Confidence 4678999999999999999999999999998888887654 333333333 222 246677799987 44
No 165
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.74 E-value=4.3e-08 Score=75.18 Aligned_cols=64 Identities=27% Similarity=0.358 Sum_probs=48.1
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.|+++|||+++|||.++++.|+++|++|++++|+. +..++..+++... +....++.+|++++.+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~ 66 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL-GVEVIFFPADVADLSA 66 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc-CCceEEEEecCCCHHH
Confidence 36899999999999999999999999999999864 3444444444332 3345667888887543
No 166
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.74 E-value=6.3e-08 Score=83.44 Aligned_cols=70 Identities=27% Similarity=0.235 Sum_probs=55.0
Q ss_pred CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH-----h---CCeEEEEEcccCCCCC
Q 032110 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE-----F---GEQHVVQNVMLAKGMK 144 (147)
Q Consensus 75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~-----~---~~~~~~~~~dv~~~~~ 144 (147)
.....||+++||||+||||+.++++|+++|++|++++|+.+.+++..+++... . .....++.+|+.+..+
T Consensus 75 ~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es 152 (576)
T PLN03209 75 LDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ 152 (576)
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence 34567899999999999999999999999999999999998887766655431 1 1225677889887554
No 167
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.73 E-value=6.4e-08 Score=73.91 Aligned_cols=67 Identities=25% Similarity=0.394 Sum_probs=48.9
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~-~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
++++|+++|||+++|||.+++++|+++|++|++..++ .+...+...++.+. +....++.+|+++..+
T Consensus 3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~ 70 (252)
T PRK06077 3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN-GGEGIGVLADVSTREG 70 (252)
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc-CCeeEEEEeccCCHHH
Confidence 4678999999999999999999999999998887653 34444444444432 3345567788776543
No 168
>PRK06924 short chain dehydrogenase; Provisional
Probab=98.72 E-value=3.6e-08 Score=75.44 Aligned_cols=61 Identities=28% Similarity=0.489 Sum_probs=47.0
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
|+++|||+++|||++++++|+++|++|++++|++ +.++ ++.+..+....++.+|+++..++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~ 63 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELT----KLAEQYNSNLTFHSLDLQDVHEL 63 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHH----HHHhccCCceEEEEecCCCHHHH
Confidence 5899999999999999999999999999999987 3333 22233334456778999886543
No 169
>PRK06483 dihydromonapterin reductase; Provisional
Probab=98.72 E-value=3e-08 Score=75.44 Aligned_cols=37 Identities=41% Similarity=0.577 Sum_probs=34.2
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~ 116 (147)
+|+++|||+++|||+++++.|+++|++|++++|+.+.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 38 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP 38 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh
Confidence 5789999999999999999999999999999998754
No 170
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.72 E-value=7.5e-08 Score=72.87 Aligned_cols=67 Identities=24% Similarity=0.387 Sum_probs=47.2
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~-~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+++|+++|||++++||.++++.|+++|++|++..++.+. .+....++... +....++.+|+.+...
T Consensus 3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~ 70 (249)
T PRK12825 3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL-GRRAQAVQADVTDKAA 70 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-CCceEEEECCcCCHHH
Confidence 3556799999999999999999999999998886665443 33333333332 3334566777776543
No 171
>PRK12827 short chain dehydrogenase; Provisional
Probab=98.71 E-value=5.6e-08 Score=73.90 Aligned_cols=66 Identities=23% Similarity=0.325 Sum_probs=47.7
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC----ChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR----SAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r----~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
.+++|+++|||+++|||+.+++.|+++|++|++++| +.+..++..+++... +....++.+|+++..
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~ 72 (249)
T PRK12827 3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA-GGKALGLAFDVRDFA 72 (249)
T ss_pred CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc-CCcEEEEEccCCCHH
Confidence 356789999999999999999999999999999765 334444444444332 334556677777654
No 172
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.71 E-value=2.4e-08 Score=74.37 Aligned_cols=64 Identities=20% Similarity=0.278 Sum_probs=55.1
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
.+|-+++||||.+|+|++.+++|+.+|+.|+++|...++.++.++|+ ++..++...|+++|.++
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel----g~~~vf~padvtsekdv 70 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL----GGKVVFTPADVTSEKDV 70 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh----CCceEEeccccCcHHHH
Confidence 46679999999999999999999999999999999888887776665 66678888888887764
No 173
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.71 E-value=6.3e-08 Score=74.61 Aligned_cols=67 Identities=18% Similarity=0.269 Sum_probs=48.1
Q ss_pred CCCCCEEEEeCCcC--hHHHHHHHHHHHCCCEEEEEeCC-----------hHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 77 MLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRS-----------AERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 77 ~~~~k~~lVTG~s~--GIG~~~a~~La~~Ga~V~i~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
.+++|+++|||+++ |||.++++.|+++|++|++++|+ .....+...++.. .+....++.+|+++..
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~ 80 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES-YGVRCEHMEIDLSQPY 80 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHh-cCCeEEEEECCCCCHH
Confidence 45789999999994 99999999999999999999987 2222223333332 2444566788887754
Q ss_pred C
Q 032110 144 K 144 (147)
Q Consensus 144 ~ 144 (147)
+
T Consensus 81 ~ 81 (256)
T PRK12748 81 A 81 (256)
T ss_pred H
Confidence 3
No 174
>PRK12742 oxidoreductase; Provisional
Probab=98.71 E-value=5e-08 Score=73.95 Aligned_cols=42 Identities=29% Similarity=0.530 Sum_probs=35.6
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVD 118 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~ 118 (147)
.+++|+++|||+++|||+++++.|+++|++|+++++ +.+..+
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~ 45 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAE 45 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHH
Confidence 367899999999999999999999999999988766 444443
No 175
>PRK12367 short chain dehydrogenase; Provisional
Probab=98.70 E-value=2.9e-08 Score=77.00 Aligned_cols=39 Identities=31% Similarity=0.371 Sum_probs=36.4
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
..+++|+++|||+++|||.+++++|+++|++|++++|+.
T Consensus 10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~ 48 (245)
T PRK12367 10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSK 48 (245)
T ss_pred HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCc
Confidence 457889999999999999999999999999999999986
No 176
>PRK06123 short chain dehydrogenase; Provisional
Probab=98.70 E-value=7.1e-08 Score=73.61 Aligned_cols=64 Identities=25% Similarity=0.359 Sum_probs=47.4
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~-r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+|+++|||+++|||.+++++|+++|++|++.+ ++++..++..+++... +....++.+|+++...
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~ 66 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ-GGEALAVAADVADEAD 66 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC-CCcEEEEEeccCCHHH
Confidence 46899999999999999999999999998887 4445555554555432 3335567888887543
No 177
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.69 E-value=6.5e-08 Score=73.58 Aligned_cols=45 Identities=31% Similarity=0.447 Sum_probs=40.0
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA 120 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~ 120 (147)
+++++|+++|||+++|||..+++.|+++|++|++++|+.+..++.
T Consensus 5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~ 49 (245)
T PRK07060 5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRL 49 (245)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 457889999999999999999999999999999999998766544
No 178
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.68 E-value=6.6e-08 Score=74.24 Aligned_cols=58 Identities=28% Similarity=0.526 Sum_probs=45.2
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
+++|||+++|||.++++.|+++|++|++++|+++.+++..+++ +....++.+|+++..
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~ 59 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----GDNLYIAQLDVRNRA 59 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----ccceEEEEecCCCHH
Confidence 6899999999999999999999999999999987765544332 223445667776654
No 179
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=98.67 E-value=8.9e-08 Score=73.15 Aligned_cols=64 Identities=30% Similarity=0.287 Sum_probs=49.4
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~-r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.|+++|||+++|||..+++.|+++|++|+++. |+.+.+++..+++.. .+....++.+|+++..+
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~ 66 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRA-AGGRACVVAGDVANEAD 66 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEeccCCHHH
Confidence 36899999999999999999999999998764 666666666666644 34446677888887544
No 180
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=98.66 E-value=1e-07 Score=72.23 Aligned_cols=62 Identities=24% Similarity=0.232 Sum_probs=46.3
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
|+++|||+++|||.++++.|+++|++|+++.| +.+..++..+++... +....++.+|++++.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~ 63 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL-GFDFRVVEGDVSSFE 63 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh-CCceEEEEecCCCHH
Confidence 68999999999999999999999999999888 555555544444332 223455677777654
No 181
>PRK06482 short chain dehydrogenase; Provisional
Probab=98.66 E-value=7.7e-08 Score=74.88 Aligned_cols=60 Identities=22% Similarity=0.416 Sum_probs=46.3
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
.|+++||||++|||++++++|+++|++|++++|+++.+++..++ .+....++.+|++|..
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~ 61 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKAR----YGDRLWVLQLDVTDSA 61 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----ccCceEEEEccCCCHH
Confidence 36899999999999999999999999999999998765544332 2333456677777654
No 182
>PRK06179 short chain dehydrogenase; Provisional
Probab=98.66 E-value=1.8e-07 Score=72.55 Aligned_cols=62 Identities=32% Similarity=0.395 Sum_probs=47.4
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH-------------------HHHHHHHHHHHhCCeEEEEEccc
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-------------------VDSAVQSLREEFGEQHVVQNVML 139 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~-------------------~~~~~~~l~~~~~~~~~~~~~dv 139 (147)
++|+++||||++|||++++++|+++|++|++.+|+.+. .+++++++.+.++..++++++..
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag 82 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAG 82 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 56799999999999999999999999999999997543 23444455555666666666654
Q ss_pred C
Q 032110 140 A 140 (147)
Q Consensus 140 ~ 140 (147)
.
T Consensus 83 ~ 83 (270)
T PRK06179 83 V 83 (270)
T ss_pred C
Confidence 3
No 183
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=98.66 E-value=9.2e-08 Score=72.74 Aligned_cols=63 Identities=21% Similarity=0.317 Sum_probs=49.9
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEE-EeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i-~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
|+++|||+++|||.+++++|+++|++|++ ..|+.+..++...++... +....++.+|++|..+
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~ 65 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA-GGKAFVLQADISDENQ 65 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC-CCeEEEEEccCCCHHH
Confidence 58999999999999999999999999987 467777777666666543 4445677888887654
No 184
>PRK07069 short chain dehydrogenase; Validated
Probab=98.65 E-value=8.7e-08 Score=73.15 Aligned_cols=63 Identities=22% Similarity=0.440 Sum_probs=49.0
Q ss_pred EEEeCCcChHHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHHHhCC-eEEEEEcccCCCCCc
Q 032110 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGE-QHVVQNVMLAKGMKW 145 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~-~~~~~~~~~~l~~~~~~-~~~~~~~dv~~~~~~ 145 (147)
++|||+++|||.++++.|+++|++|++++|+ .+.+++..+++....+. ....+.+|+++.+++
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 66 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQW 66 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHH
Confidence 7999999999999999999999999999998 66666666666544332 334567888876543
No 185
>PRK08324 short chain dehydrogenase; Validated
Probab=98.65 E-value=8.3e-08 Score=84.39 Aligned_cols=66 Identities=23% Similarity=0.294 Sum_probs=53.7
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.+.||+++||||++|||+++++.|+++|++|++++|+.+.+++..+++... ....++.+|++++..
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~--~~v~~v~~Dvtd~~~ 484 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP--DRALGVACDVTDEAA 484 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc--CcEEEEEecCCCHHH
Confidence 468899999999999999999999999999999999998877766665433 235567788877543
No 186
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.64 E-value=2e-07 Score=74.67 Aligned_cols=38 Identities=24% Similarity=0.428 Sum_probs=34.1
Q ss_pred CCCCCCCEEEEeCCc--ChHHHHHHHHHHHCCCEEEEEeC
Q 032110 75 EPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSR 112 (147)
Q Consensus 75 ~~~~~~k~~lVTG~s--~GIG~~~a~~La~~Ga~V~i~~r 112 (147)
...+.||+++|||++ +|||+++|+.|+++|++|++.++
T Consensus 3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~ 42 (299)
T PRK06300 3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTW 42 (299)
T ss_pred CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEec
Confidence 346789999999996 99999999999999999999763
No 187
>PRK05884 short chain dehydrogenase; Provisional
Probab=98.63 E-value=6.8e-08 Score=73.54 Aligned_cols=56 Identities=20% Similarity=0.303 Sum_probs=43.6
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
.++||||++|||+++++.|+++|++|++.+|+.+++++..+++ . ..++.+|++++.
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~----~--~~~~~~D~~~~~ 57 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL----D--VDAIVCDNTDPA 57 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----c--CcEEecCCCCHH
Confidence 4899999999999999999999999999999988776554443 1 224456666543
No 188
>PLN00015 protochlorophyllide reductase
Probab=98.61 E-value=7.2e-08 Score=76.80 Aligned_cols=60 Identities=27% Similarity=0.358 Sum_probs=48.2
Q ss_pred EEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 84 LITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 84 lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+|||+++|||++++++|+++| ++|++.+|+.+.+++..+++... +....++.+|+++..+
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~d~~~ 61 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP-KDSYTVMHLDLASLDS 61 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEEecCCCHHH
Confidence 599999999999999999999 99999999988877776666422 2334567888887554
No 189
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.60 E-value=8.7e-08 Score=74.61 Aligned_cols=38 Identities=50% Similarity=0.625 Sum_probs=34.7
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
|+++||||++|||.++++.|+++|++|++++|+.+.++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~ 39 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVE 39 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 68999999999999999999999999999999876543
No 190
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=98.60 E-value=1.3e-07 Score=78.68 Aligned_cols=44 Identities=25% Similarity=0.406 Sum_probs=39.2
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
..+++|+++||||++|||.+++++|+++|++|++++|+.+++++
T Consensus 174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~ 217 (406)
T PRK07424 174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITL 217 (406)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 35678999999999999999999999999999999998776543
No 191
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=98.58 E-value=1.4e-07 Score=72.16 Aligned_cols=65 Identities=32% Similarity=0.406 Sum_probs=50.2
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh------------------HHHHHHHHHHHHHhCCeEEEEEc
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA------------------ERVDSAVQSLREEFGEQHVVQNV 137 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~ 137 (147)
+++++|+++|||+++|||..++++|+++|++|++++|+. +..++.++++.+.++..++++++
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ 83 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNA 83 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchhhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 457889999999999999999999999999999998765 12344455555566666777766
Q ss_pred ccC
Q 032110 138 MLA 140 (147)
Q Consensus 138 dv~ 140 (147)
...
T Consensus 84 ag~ 86 (252)
T PRK08220 84 AGI 86 (252)
T ss_pred CCc
Confidence 543
No 192
>PRK07041 short chain dehydrogenase; Provisional
Probab=98.57 E-value=1.3e-07 Score=71.38 Aligned_cols=59 Identities=32% Similarity=0.522 Sum_probs=47.9
Q ss_pred EEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 84 LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 84 lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+|||+++|||+++++.|+++|++|++++|+.+.+++..+++.. +....++.+|+++..+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~ 59 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG--GAPVRTAALDITDEAA 59 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CCceEEEEccCCCHHH
Confidence 5999999999999999999999999999998877766665542 3335677899988654
No 193
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=98.56 E-value=2.1e-07 Score=70.71 Aligned_cols=61 Identities=25% Similarity=0.431 Sum_probs=48.0
Q ss_pred EEEeCCcChHHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~-~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
++|||+++|||.++++.|+++|++|+++++. .+.+++..+++.+. +....++.+|+++..+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~ 62 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ-GGNARLLQFDVADRVA 62 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-CCeEEEEEccCCCHHH
Confidence 5899999999999999999999999998865 45566666666554 3446677899988654
No 194
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=98.56 E-value=2.7e-07 Score=70.05 Aligned_cols=62 Identities=24% Similarity=0.288 Sum_probs=44.6
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~-~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
|+++|||+++|||..+++.|+++|++|++++|+.. ..++...++.. .+....++.+|+++..
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~ 65 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF-TEDQVRLKELDVTDTE 65 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc-cCCeEEEEEcCCCCHH
Confidence 58999999999999999999999999999999854 22222222211 2233556778887754
No 195
>PRK07023 short chain dehydrogenase; Provisional
Probab=98.53 E-value=2e-07 Score=71.17 Aligned_cols=57 Identities=26% Similarity=0.410 Sum_probs=42.4
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+++|||+++|||.++++.|+++|++|++++|+.+.. . ....+....++.+|+++..+
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~~~~~~~~~~~D~~~~~~ 59 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAAAGERLAEVELDLSDAAA 59 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhccCCeEEEEEeccCCHHH
Confidence 699999999999999999999999999999976431 1 11223334556777776543
No 196
>PLN02583 cinnamoyl-CoA reductase
Probab=98.53 E-value=3.4e-07 Score=72.55 Aligned_cols=67 Identities=18% Similarity=0.184 Sum_probs=47.6
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH--HHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE--RVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~--~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+-++|+++||||+|+||.+++++|+++|++|+++.|+.+ ..++...++... +....++.+|++|...
T Consensus 3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl~d~~~ 71 (297)
T PLN02583 3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE-EERLKVFDVDPLDYHS 71 (297)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC-CCceEEEEecCCCHHH
Confidence 345779999999999999999999999999999998643 222222333211 2234566789888654
No 197
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=98.50 E-value=2.9e-07 Score=70.43 Aligned_cols=57 Identities=32% Similarity=0.561 Sum_probs=50.1
Q ss_pred CCc--ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 87 GST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 87 G~s--~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
|++ +|||+++|++|+++|++|++++|+.+++++.++++.++.+.. ++.+|++++.++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v 59 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESV 59 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHH
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHH
Confidence 555 999999999999999999999999999888888998887754 599999987654
No 198
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=98.49 E-value=2.8e-07 Score=74.40 Aligned_cols=64 Identities=19% Similarity=0.056 Sum_probs=46.1
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
+++|+++||||+|+||.++++.|+++|++|++++|+.....+....+.. +....++.+|+++..
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~ 65 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL--AKKIEDHFGDIRDAA 65 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh--cCCceEEEccCCCHH
Confidence 4678999999999999999999999999999999887644333222211 222334567776644
No 199
>PRK08177 short chain dehydrogenase; Provisional
Probab=98.49 E-value=2.4e-07 Score=70.13 Aligned_cols=38 Identities=26% Similarity=0.479 Sum_probs=34.9
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
|+++|||+++|||.++++.|+++|++|++++|+++..+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~ 39 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDT 39 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchH
Confidence 68999999999999999999999999999999876544
No 200
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.49 E-value=6.4e-07 Score=67.87 Aligned_cols=63 Identities=25% Similarity=0.320 Sum_probs=48.7
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH------------HHHHHHHHHHhCCeEEEEEccc
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV------------DSAVQSLREEFGEQHVVQNVML 139 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~------------~~~~~~l~~~~~~~~~~~~~dv 139 (147)
.+++|+++|||+++|||.++++.|+++|++|++++|+.... ...++++.+.++..++++++..
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag 76 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAG 76 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccCCcEEEEECChHHHHHHHHHhhCCCCEEEECCC
Confidence 46789999999999999999999999999999999864321 1113555556677777777765
No 201
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=98.49 E-value=4.3e-07 Score=72.34 Aligned_cols=67 Identities=16% Similarity=0.057 Sum_probs=48.2
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHh-CCeEEEEEcccCCCCCc
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-GEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~~~dv~~~~~~ 145 (147)
.+|+++||||+|+||.+++++|+++|++|+++.|+.+..++....+.... .....++.+|+++...+
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~ 71 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSF 71 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHH
Confidence 46899999999999999999999999999999888765544322111111 12345677888876543
No 202
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=98.46 E-value=3.9e-07 Score=73.18 Aligned_cols=64 Identities=20% Similarity=0.167 Sum_probs=47.1
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+++|+++||||+|+||.++++.|+++| ++|++++|+.....+...++. .....++.+|++|...
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~ 67 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP---APCLRFFIGDVRDKER 67 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC---CCcEEEEEccCCCHHH
Confidence 468899999999999999999999986 789999988665433322221 1234567788887543
No 203
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=98.45 E-value=7.9e-07 Score=70.84 Aligned_cols=68 Identities=18% Similarity=0.060 Sum_probs=48.2
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH-hCCeEEEEEcccCCCCCc
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE-FGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~-~~~~~~~~~~dv~~~~~~ 145 (147)
..||+++||||+|+||..++++|+++|++|+++.|+.+..+......... ......++.+|+++...+
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 71 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSF 71 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchH
Confidence 45789999999999999999999999999999988876544332211111 112345567888776543
No 204
>PRK08017 oxidoreductase; Provisional
Probab=98.45 E-value=4e-07 Score=69.74 Aligned_cols=39 Identities=36% Similarity=0.543 Sum_probs=35.6
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
|+++|||+++|||.++++.|+++|++|++++|+.++++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~ 41 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR 41 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHH
Confidence 689999999999999999999999999999999876543
No 205
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=98.44 E-value=7.6e-07 Score=69.89 Aligned_cols=63 Identities=21% Similarity=0.331 Sum_probs=53.3
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCC-----EEEEEeCChHHHHHHHHHHHHHhCCe---EEEEEcccCC
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGD-----NVIICSRSAERVDSAVQSLREEFGEQ---HVVQNVMLAK 141 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-----~V~i~~r~~~~~~~~~~~l~~~~~~~---~~~~~~dv~~ 141 (147)
..|+++|||+++|||++++.+|.+... ++++++|+-++.++.+.++.+-+++. ..++.+|+++
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sN 72 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSN 72 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhh
Confidence 357999999999999999999997653 47788999999999999999988843 4567888876
No 206
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=98.44 E-value=9e-07 Score=68.33 Aligned_cols=69 Identities=22% Similarity=0.402 Sum_probs=59.9
Q ss_pred CCCCCCEEEEeCC--cChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCcc
Q 032110 76 PMLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKWQ 146 (147)
Q Consensus 76 ~~~~~k~~lVTG~--s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~~ 146 (147)
..|+||+++|+|- .++|+..||+.|.++|+++++++.++ ++++-++++.++.+. ..+++|||+++++++
T Consensus 2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s-~~v~~cDV~~d~~i~ 72 (259)
T COG0623 2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGS-DLVLPCDVTNDESID 72 (259)
T ss_pred CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccC-CeEEecCCCCHHHHH
Confidence 3689999999994 48999999999999999999999887 788888888887766 678999999987653
No 207
>PRK08219 short chain dehydrogenase; Provisional
Probab=98.44 E-value=4.8e-07 Score=67.91 Aligned_cols=59 Identities=31% Similarity=0.418 Sum_probs=44.7
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
.|+++||||+++||+.+++.|+++ ++|++++|+.+..++..++. .. ..++.+|++|...
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~D~~~~~~ 61 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PG-ATPFPVDLTDPEA 61 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----cc-ceEEecCCCCHHH
Confidence 468999999999999999999999 99999999987655433221 12 3456777776443
No 208
>PRK06953 short chain dehydrogenase; Provisional
Probab=98.43 E-value=5.6e-07 Score=67.98 Aligned_cols=56 Identities=25% Similarity=0.371 Sum_probs=43.1
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
|+++|||+++|||.++++.|+++|++|++++|+.+..++.. .. + ..++.+|+++..
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~-~--~~~~~~D~~~~~ 57 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----AL-G--AEALALDVADPA 57 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hc-c--ceEEEecCCCHH
Confidence 58999999999999999999999999999999977654332 11 1 234567776654
No 209
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=98.42 E-value=1.5e-06 Score=71.80 Aligned_cols=43 Identities=26% Similarity=0.393 Sum_probs=37.5
Q ss_pred CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117 (147)
Q Consensus 75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~ 117 (147)
....++++++||||+|+||..++++|+++|++|++++|+.+..
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~ 97 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGI 97 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhc
Confidence 3345677999999999999999999999999999999987543
No 210
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=98.42 E-value=8.4e-07 Score=71.76 Aligned_cols=63 Identities=22% Similarity=0.199 Sum_probs=47.1
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
.+++++||||+|+||..++++|+++|++|++++|+.+..+....++.. +....++.+|+++..
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~ 71 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE--GDRLRLFRADLQEEG 71 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc--CCeEEEEECCCCCHH
Confidence 456899999999999999999999999999999987665544433321 223445667777643
No 211
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=98.41 E-value=4e-07 Score=73.26 Aligned_cols=63 Identities=21% Similarity=0.112 Sum_probs=43.4
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH-----HHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-----VDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
|+++||||+|+||..++++|+++|++|++++|+.+. ++...++.....+....++.+|++|..
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 68 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSS 68 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHH
Confidence 589999999999999999999999999999987542 111111111111223456678887754
No 212
>PLN02240 UDP-glucose 4-epimerase
Probab=98.40 E-value=9.6e-07 Score=70.93 Aligned_cols=67 Identities=24% Similarity=0.334 Sum_probs=45.6
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH---hCCeEEEEEcccCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE---FGEQHVVQNVMLAKGM 143 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~---~~~~~~~~~~dv~~~~ 143 (147)
+|.+|+++||||+|+||..+++.|+++|++|++++|......+....+... .+....++.+|+++..
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 71 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKE 71 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHH
Confidence 567889999999999999999999999999999987543222211222111 1222345667777644
No 213
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=98.39 E-value=1.2e-06 Score=64.97 Aligned_cols=63 Identities=24% Similarity=0.368 Sum_probs=48.7
Q ss_pred EEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCCh---HHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 82 NVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA---ERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~---~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
+++||||.+|||..+++.|+++| .+|+++.|+. ...++..+++.+. +....++.+|++|..++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~-g~~v~~~~~Dv~d~~~v 68 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA-GARVEYVQCDVTDPEAV 68 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT-T-EEEEEE--TTSHHHH
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC-CCceeeeccCccCHHHH
Confidence 78999999999999999999998 5799999983 2345567777765 55678889999986543
No 214
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=98.39 E-value=1e-06 Score=66.47 Aligned_cols=61 Identities=31% Similarity=0.465 Sum_probs=46.3
Q ss_pred EEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
++|||++++||..+++.|+++|++|++++|+. +..++...++... +....++.+|++++.+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~ 62 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY-GVKALGVVCDVSDRED 62 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-CCceEEEEecCCCHHH
Confidence 58999999999999999999999999998875 4444444445433 3345677888887654
No 215
>PLN02214 cinnamoyl-CoA reductase
Probab=98.38 E-value=1.5e-06 Score=70.39 Aligned_cols=67 Identities=18% Similarity=0.114 Sum_probs=48.1
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH-HHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA-VQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~-~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
+++|+++||||+|+||..++++|+++|++|++++|+.+..... ..++.. ......++.+|+++..++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~ 75 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG-GKERLILCKADLQDYEAL 75 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC-CCCcEEEEecCcCChHHH
Confidence 4577999999999999999999999999999999987643321 222221 112245667888875543
No 216
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=98.38 E-value=1e-06 Score=71.26 Aligned_cols=67 Identities=19% Similarity=0.138 Sum_probs=53.2
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH--HHHHHHHHhCCeEEEEEcccCCCCCcc
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS--AVQSLREEFGEQHVVQNVMLAKGMKWQ 146 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~--~~~~l~~~~~~~~~~~~~dv~~~~~~~ 146 (147)
.+++++|||++|.||..+++.|+++||.|..+.|+++..+. .+.++.....+ ..++..|+.++..++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~-l~l~~aDL~d~~sf~ 73 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKER-LKLFKADLLDEGSFD 73 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCccc-ceEEeccccccchHH
Confidence 56799999999999999999999999999999999987443 34445433223 678889998876553
No 217
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.37 E-value=1.3e-06 Score=65.27 Aligned_cols=62 Identities=27% Similarity=0.285 Sum_probs=50.8
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK 141 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~ 141 (147)
.++.|+++++||+..|||+++++.|+..|++|+...|+++.+..+++|. +....-+.+|+.+
T Consensus 3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~----p~~I~Pi~~Dls~ 64 (245)
T KOG1207|consen 3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET----PSLIIPIVGDLSA 64 (245)
T ss_pred ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC----CcceeeeEecccH
Confidence 3578999999999999999999999999999999999999888776653 3334445566654
No 218
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=98.37 E-value=1e-06 Score=72.83 Aligned_cols=67 Identities=21% Similarity=0.195 Sum_probs=47.4
Q ss_pred CCCCEEEEeCCcChHHHH--HHHHHHHCCCEEEEEeCChHHHH-----------HHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 78 LPPYNVLITGSTKGIGYA--LAKEFLKAGDNVIICSRSAERVD-----------SAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~--~a~~La~~Ga~V~i~~r~~~~~~-----------~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
..+|+++|||+++|||++ ++++| ++|++|+++++..+..+ +..++..+..+.....+++|+++++.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 357899999999999999 89999 99999888875332211 12233333445445678999998654
Q ss_pred c
Q 032110 145 W 145 (147)
Q Consensus 145 ~ 145 (147)
+
T Consensus 118 v 118 (398)
T PRK13656 118 K 118 (398)
T ss_pred H
Confidence 3
No 219
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.36 E-value=8.2e-07 Score=68.20 Aligned_cols=41 Identities=49% Similarity=0.697 Sum_probs=34.1
Q ss_pred CCEEEEeCCc-ChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110 80 PYNVLITGST-KGIGYALAKEFLKAGDNVIICSRSAERVDSA 120 (147)
Q Consensus 80 ~k~~lVTG~s-~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~ 120 (147)
.|+++|||++ ||||.+++++|++.|+.|+.+.|+.+...++
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L 48 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQL 48 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhH
Confidence 4678888765 8999999999999999999999987654433
No 220
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=98.36 E-value=1.4e-06 Score=69.05 Aligned_cols=66 Identities=20% Similarity=0.123 Sum_probs=46.5
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH--hCCeEEEEEcccCCCCCc
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE--FGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~--~~~~~~~~~~dv~~~~~~ 145 (147)
++|+++||||+|+||..++++|+++|++|++++|+.+..... ..+... ......++.+|+++...|
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~ 70 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDGAKERLHLFKANLLEEGSF 70 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccCCCCceEEEeccccCcchH
Confidence 467899999999999999999999999999999886543322 122111 112345667888775543
No 221
>PRK07577 short chain dehydrogenase; Provisional
Probab=98.35 E-value=4.2e-06 Score=63.23 Aligned_cols=61 Identities=31% Similarity=0.391 Sum_probs=45.5
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH----------------HHHHHHHHHHHhCCeEEEEEcccC
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER----------------VDSAVQSLREEFGEQHVVQNVMLA 140 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~----------------~~~~~~~l~~~~~~~~~~~~~dv~ 140 (147)
.+|+++|||+++|||+.+++.|+++|++|++++|+.+. .++.++++.+.+ +.+.++++...
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~ 78 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGELFACDLADIEQTAATLAQINEIH-PVDAIVNNVGI 78 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccccCceEEEeeCCCHHHHHHHHHHHHHhC-CCcEEEECCCC
Confidence 57899999999999999999999999999999886432 233444444444 35666666544
No 222
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.34 E-value=1.4e-06 Score=72.70 Aligned_cols=37 Identities=30% Similarity=0.470 Sum_probs=34.4
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS 113 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~ 113 (147)
.+++|+++|||+++|||.++++.|+++|++|+++++.
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~ 243 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVP 243 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4678999999999999999999999999999999884
No 223
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=98.34 E-value=1.1e-06 Score=62.51 Aligned_cols=62 Identities=27% Similarity=0.396 Sum_probs=43.7
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH---HHHHHHHhCCeEEEEEcccCCCC
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSA---VQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~---~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
|+++|||+++|||.++++.|+++|+ .|++.+|+.+..++. .+++.. .+....++.+|+++..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~ 66 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEA-LGAEVTVVACDVADRA 66 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHh-cCCeEEEEECCCCCHH
Confidence 5789999999999999999999996 688888876543322 233332 2334456677777643
No 224
>PLN02686 cinnamoyl-CoA reductase
Probab=98.34 E-value=2.2e-06 Score=70.14 Aligned_cols=68 Identities=16% Similarity=0.125 Sum_probs=49.6
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHh-----CCeEEEEEcccCCCCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-----GEQHVVQNVMLAKGMK 144 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~dv~~~~~ 144 (147)
...++|+++||||+|+||..+++.|+++|++|+++.|+.+..++. .++.... .....++.+|++|...
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~ 121 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPES 121 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHH
Confidence 356788999999999999999999999999999988887655443 2332110 1124567788887553
No 225
>PLN02572 UDP-sulfoquinovose synthase
Probab=98.34 E-value=2.3e-06 Score=71.82 Aligned_cols=36 Identities=25% Similarity=0.285 Sum_probs=33.0
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR 112 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r 112 (147)
.+++|+++||||+|+||..++++|+++|++|+++++
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~ 79 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDN 79 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEec
Confidence 466789999999999999999999999999999874
No 226
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.31 E-value=2.2e-06 Score=73.48 Aligned_cols=68 Identities=28% Similarity=0.317 Sum_probs=59.4
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHHHhCCe-EEEEEcccCCCCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQ-HVVQNVMLAKGMK 144 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l~~~~~~~-~~~~~~dv~~~~~ 144 (147)
.+.||+++||||+|.||.++++++++.+ .++++.++++-++.....++...++.. ...+.+|+.|...
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~ 316 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDR 316 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHH
Confidence 4799999999999999999999999999 569999999999999999999887744 5667899988654
No 227
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.31 E-value=2.7e-06 Score=63.34 Aligned_cols=61 Identities=13% Similarity=0.132 Sum_probs=47.3
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
+++||||+ |+|.++++.|+++|++|++.+|+.+..++....+.. ......+.+|+.|..++
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~--~~~i~~~~~Dv~d~~sv 62 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT--PESITPLPLDYHDDDAL 62 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc--CCcEEEEEccCCCHHHH
Confidence 68999998 788889999999999999999998776665544432 33455678899886543
No 228
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=98.29 E-value=1.1e-06 Score=70.56 Aligned_cols=39 Identities=31% Similarity=0.203 Sum_probs=35.5
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~ 115 (147)
++++|+++||||+|+||.+++++|+++|++|++++|+.+
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~ 41 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS 41 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence 467889999999999999999999999999999988654
No 229
>PLN00198 anthocyanidin reductase; Provisional
Probab=98.27 E-value=3.2e-06 Score=67.87 Aligned_cols=65 Identities=20% Similarity=0.196 Sum_probs=45.0
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH--HHHHHHhCCeEEEEEcccCCCCC
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV--QSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~--~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
+.+++++||||+|+||..++++|+++|++|+++.|+.+...... ..+. ..+ ...++.+|++|...
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~-~~~~~~~Dl~d~~~ 73 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQ-ELG-DLKIFGADLTDEES 73 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcC-CCC-ceEEEEcCCCChHH
Confidence 34678999999999999999999999999998888764432221 1111 111 23456777776543
No 230
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.25 E-value=2.1e-06 Score=68.88 Aligned_cols=61 Identities=30% Similarity=0.379 Sum_probs=52.9
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCe-EEEEEcccCC
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ-HVVQNVMLAK 141 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~-~~~~~~dv~~ 141 (147)
+.++||||++|||+++|.++..+|++|.++.|+.++++++++++.-..... +.+..+|+.|
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~ 95 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVID 95 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEecccccc
Confidence 489999999999999999999999999999999999999999987665544 4456777755
No 231
>PLN02650 dihydroflavonol-4-reductase
Probab=98.24 E-value=3.7e-06 Score=67.89 Aligned_cols=66 Identities=21% Similarity=0.136 Sum_probs=46.6
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH-hCCeEEEEEcccCCCCC
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE-FGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~-~~~~~~~~~~dv~~~~~ 144 (147)
..|+++||||+|.||..++++|+++|++|++++|+.+..++....+... ......++..|+++...
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~ 70 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGS 70 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhh
Confidence 4568999999999999999999999999999999876554432211110 01124566778877543
No 232
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.23 E-value=4.5e-06 Score=66.53 Aligned_cols=52 Identities=15% Similarity=0.284 Sum_probs=42.9
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCE-EEEEeCCh---HHHHHHHHHHHHHhC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSA---ERVDSAVQSLREEFG 129 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~-V~i~~r~~---~~~~~~~~~l~~~~~ 129 (147)
.+++|+++|+|+ ||+|++++..|++.|++ |++++|+. +++++..+++.+.++
T Consensus 123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~ 178 (289)
T PRK12548 123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP 178 (289)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC
Confidence 467899999998 69999999999999986 99999997 667777776654433
No 233
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=98.22 E-value=3.2e-06 Score=65.14 Aligned_cols=66 Identities=29% Similarity=0.437 Sum_probs=47.0
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHC-CCEEEE-EeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKA-GDNVII-CSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i-~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
..|.++||||.+|||+.++++|... |-.+++ .+|+.++..+..+++ .......+++++|++.++++
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k-~~~d~rvHii~Ldvt~deS~ 69 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALK-SKSDSRVHIIQLDVTCDESI 69 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHh-hccCCceEEEEEecccHHHH
Confidence 3457999999999999999999864 455544 567787763332332 23355578999999987654
No 234
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=98.21 E-value=3.5e-06 Score=67.59 Aligned_cols=67 Identities=25% Similarity=0.231 Sum_probs=54.7
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
....+|.++|||+-+|+|+.+|+.|.++|..|+..+.+++..+++..+.. ......+++||++++++
T Consensus 25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~---s~rl~t~~LDVT~~esi 91 (322)
T KOG1610|consen 25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK---SPRLRTLQLDVTKPESV 91 (322)
T ss_pred cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc---CCcceeEeeccCCHHHH
Confidence 34678899999999999999999999999999999988777666655543 33355669999998765
No 235
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.19 E-value=1.6e-05 Score=59.43 Aligned_cols=51 Identities=27% Similarity=0.391 Sum_probs=45.3
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~ 127 (147)
++++++++|.|++|++|+.+++.|++.|++|++++|+.+++++..+++.+.
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~ 75 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRAR 75 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhh
Confidence 567889999999999999999999999999999999998888877766543
No 236
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=98.18 E-value=6.8e-06 Score=63.44 Aligned_cols=59 Identities=14% Similarity=0.266 Sum_probs=44.1
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK 141 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~ 141 (147)
..+++++|||++|+||+.++++|++.|++|+++.|+.+...+... . +....++.+|+.+
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~-~~~~~~~~~Dl~d 73 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----Q-DPSLQIVRADVTE 73 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----c-CCceEEEEeeCCC
Confidence 456789999999999999999999999999999998766443211 1 1124455667665
No 237
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.18 E-value=4.6e-06 Score=82.04 Aligned_cols=36 Identities=31% Similarity=0.433 Sum_probs=33.5
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCC
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRS 113 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~ 113 (147)
-++++++||||++|||.+++++|+++ |++|++++|+
T Consensus 1995 ~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813 1995 NSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 35889999999999999999999998 6999999998
No 238
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=98.12 E-value=7.1e-06 Score=65.52 Aligned_cols=62 Identities=19% Similarity=0.261 Sum_probs=40.8
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
+++||||+|+||..+++.|+++|++|++++|...........+....+....++.+|++|..
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 63 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA 63 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHH
Confidence 58999999999999999999999999998764332222222222211222345566766543
No 239
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.11 E-value=3.5e-06 Score=67.33 Aligned_cols=61 Identities=25% Similarity=0.377 Sum_probs=47.6
Q ss_pred EEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHHHhCC--e---EEEEEcccCCCC
Q 032110 83 VLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGE--Q---HVVQNVMLAKGM 143 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l~~~~~~--~---~~~~~~dv~~~~ 143 (147)
++||||+|.||.+++++|++.+ .+|+++++++..+.+...++...++. . ...+.+|+.|..
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~ 67 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKE 67 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHH
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHH
Confidence 6899999999999999999999 67999999999999998888765543 2 234567887754
No 240
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=98.11 E-value=6.4e-06 Score=66.66 Aligned_cols=40 Identities=33% Similarity=0.316 Sum_probs=35.7
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~ 115 (147)
..+++|.++||||+|.||..++++|.++|++|++++|...
T Consensus 11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~ 50 (348)
T PRK15181 11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFST 50 (348)
T ss_pred ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3467789999999999999999999999999999998543
No 241
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.08 E-value=1e-05 Score=59.15 Aligned_cols=52 Identities=27% Similarity=0.326 Sum_probs=42.2
Q ss_pred EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
++|+||+|.+|..++++|.++|++|+++.|++++.++ .....++.+|+.|..
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---------~~~~~~~~~d~~d~~ 52 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---------SPGVEIIQGDLFDPD 52 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---------CTTEEEEESCTTCHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---------ccccccceeeehhhh
Confidence 6899999999999999999999999999999987665 222445566666543
No 242
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.07 E-value=2.1e-05 Score=65.52 Aligned_cols=66 Identities=20% Similarity=0.295 Sum_probs=50.2
Q ss_pred CCCCCCEEEEeCC----------------cChHHHHHHHHHHHCCCEEEEEeCChH-------------HHHHHHHHHHH
Q 032110 76 PMLPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRSAE-------------RVDSAVQSLRE 126 (147)
Q Consensus 76 ~~~~~k~~lVTG~----------------s~GIG~~~a~~La~~Ga~V~i~~r~~~-------------~~~~~~~~l~~ 126 (147)
.+++||+++|||| +|++|+++|++|+++|++|++++++.+ ..++..+.+.+
T Consensus 184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~~~~~~~~dv~~~~~~~~~v~~ 263 (399)
T PRK05579 184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPTPAGVKRIDVESAQEMLDAVLA 263 (399)
T ss_pred cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccCCCCcEEEccCCHHHHHHHHHH
Confidence 3578999999999 555999999999999999999876531 23445555666
Q ss_pred HhCCeEEEEEcccCC
Q 032110 127 EFGEQHVVQNVMLAK 141 (147)
Q Consensus 127 ~~~~~~~~~~~dv~~ 141 (147)
.++..++++++....
T Consensus 264 ~~~~~DilI~~Aav~ 278 (399)
T PRK05579 264 ALPQADIFIMAAAVA 278 (399)
T ss_pred hcCCCCEEEEccccc
Confidence 677778888766543
No 243
>PLN02427 UDP-apiose/xylose synthase
Probab=98.03 E-value=1.1e-05 Score=66.05 Aligned_cols=40 Identities=15% Similarity=0.352 Sum_probs=34.1
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCChHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERV 117 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~~~~~ 117 (147)
.+.++++||||+|.||..+++.|+++ |++|++++|+.+..
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~ 52 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKI 52 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhh
Confidence 34457999999999999999999998 58999999876543
No 244
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=97.94 E-value=1.5e-05 Score=60.44 Aligned_cols=34 Identities=35% Similarity=0.510 Sum_probs=28.0
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCCh
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSA 114 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~ 114 (147)
++++|||+++|||++++++|+++| ..|++.+|+.
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~ 36 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHH 36 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCC
Confidence 368999999999999999999985 5666666643
No 245
>PRK07578 short chain dehydrogenase; Provisional
Probab=97.89 E-value=3.9e-05 Score=56.88 Aligned_cols=58 Identities=28% Similarity=0.418 Sum_probs=42.9
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH------HHHHHHHHHHhCCeEEEEEcccC
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV------DSAVQSLREEFGEQHVVQNVMLA 140 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~------~~~~~~l~~~~~~~~~~~~~dv~ 140 (147)
+++|||+++|||.++++.|+++ ++|++.+|+.+.. .+.++++.+..+..+.++++...
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~ 65 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSGDVQVDITDPASIRALFEKVGKVDAVVSAAGK 65 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCceEecCCChHHHHHHHHhcCCCCEEEECCCC
Confidence 6899999999999999999999 9999998865311 12233444445677777776654
No 246
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.85 E-value=9.3e-05 Score=60.44 Aligned_cols=64 Identities=25% Similarity=0.333 Sum_probs=50.9
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHC-C-CEEEEEeCChHHHHHHHHHHH--------HHhCCeEEEEEcccC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKA-G-DNVIICSRSAERVDSAVQSLR--------EEFGEQHVVQNVMLA 140 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~-G-a~V~i~~r~~~~~~~~~~~l~--------~~~~~~~~~~~~dv~ 140 (147)
++.+|+++|||++|.||..+++.|+.+ | .++++++|+.+++++..+++. +.....++++++...
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~l~~~l~~aDiVv~~ts~ 225 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILSLEEALPEADIVVWVASM 225 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHhHHHHHccCCEEEECCcC
Confidence 588999999999999999999999864 5 589999999888877766654 445556666666544
No 247
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=97.84 E-value=3.5e-05 Score=62.26 Aligned_cols=64 Identities=22% Similarity=0.255 Sum_probs=48.5
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhC--CeEEEEEcccCCCC
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG--EQHVVQNVMLAKGM 143 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~--~~~~~~~~dv~~~~ 143 (147)
++.++||||+|-||.+++.+|.++|+.|+++|.=.....+....++...+ +...+++.|++|.+
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~ 67 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAE 67 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHH
Confidence 46899999999999999999999999999987533333333333333333 66788899998854
No 248
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.83 E-value=4.6e-05 Score=60.84 Aligned_cols=36 Identities=22% Similarity=0.405 Sum_probs=33.1
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~ 117 (147)
+++||||+|.||..++++|.++|++|.+++|+.+..
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~ 37 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKA 37 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh
Confidence 589999999999999999999999999999986543
No 249
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=97.82 E-value=2.4e-05 Score=63.01 Aligned_cols=33 Identities=24% Similarity=0.432 Sum_probs=28.1
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEE-EEeCC
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVI-ICSRS 113 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~-i~~r~ 113 (147)
|+++||||+|+||.++++.|.++|++++ +.++.
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~ 35 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKL 35 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecC
Confidence 4799999999999999999999998744 45554
No 250
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.78 E-value=0.00011 Score=52.11 Aligned_cols=47 Identities=26% Similarity=0.419 Sum_probs=42.6
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSL 124 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~-V~i~~r~~~~~~~~~~~l 124 (147)
++++|.++|-| +||.|++++..|+..|++ |+++.|+.++++++++++
T Consensus 9 ~l~~~~vlviG-aGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~ 56 (135)
T PF01488_consen 9 DLKGKRVLVIG-AGGAARAVAAALAALGAKEITIVNRTPERAEALAEEF 56 (135)
T ss_dssp TGTTSEEEEES-SSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH
T ss_pred CcCCCEEEEEC-CHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc
Confidence 57899999999 599999999999999976 999999999988887776
No 251
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=97.77 E-value=2.7e-05 Score=61.54 Aligned_cols=35 Identities=31% Similarity=0.516 Sum_probs=32.5
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~ 116 (147)
+++|||++|+||..+++.|+++|++|++++|+.+.
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 36 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSD 36 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcc
Confidence 68999999999999999999999999999997654
No 252
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=97.73 E-value=0.00016 Score=57.66 Aligned_cols=34 Identities=38% Similarity=0.500 Sum_probs=31.0
Q ss_pred EEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAE 115 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~ 115 (147)
+++|||++|+||..++++|+++| ++|+++.|+.+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~ 36 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAAS 36 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence 47999999999999999999999 78999999765
No 253
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=97.71 E-value=5.6e-05 Score=59.40 Aligned_cols=32 Identities=25% Similarity=0.526 Sum_probs=29.1
Q ss_pred EEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
++||||+|+||..+++.|.++|++|++.++..
T Consensus 2 vlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~ 33 (328)
T TIGR01179 2 ILVTGGAGYIGSHTVRQLLESGHEVVVLDNLS 33 (328)
T ss_pred EEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 78999999999999999999999998887643
No 254
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.70 E-value=0.00024 Score=56.24 Aligned_cols=48 Identities=25% Similarity=0.387 Sum_probs=42.4
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLR 125 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l~ 125 (147)
.+.+|.++|.|+ ||+|+++++.|+..| .+|++++|+.++.+++.+++.
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~ 168 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG 168 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 577889999985 999999999999999 789999999998887776664
No 255
>PLN02778 3,5-epimerase/4-reductase
Probab=97.66 E-value=0.00027 Score=56.27 Aligned_cols=58 Identities=24% Similarity=0.109 Sum_probs=41.5
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccC
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLA 140 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~ 140 (147)
++++||||+|.||..++++|.++|++|++...+....+.....+.. .+.++++|+...
T Consensus 10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~--~~~D~ViH~Aa~ 67 (298)
T PLN02778 10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDA--VKPTHVFNAAGV 67 (298)
T ss_pred CeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHHh--cCCCEEEECCcc
Confidence 4799999999999999999999999998665444333333333432 234677777653
No 256
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=97.58 E-value=6.5e-05 Score=58.35 Aligned_cols=58 Identities=31% Similarity=0.334 Sum_probs=42.1
Q ss_pred EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH---------HHHHHHhCCeEEEEEcccC
Q 032110 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV---------QSLREEFGEQHVVQNVMLA 140 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~---------~~l~~~~~~~~~~~~~dv~ 140 (147)
++|||++|.||..+++.|+++|++|++++|+.+...... ..+.....+.+.++++...
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vvh~a~~ 67 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGYKPWAPLAESEALEGADAVINLAGE 67 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceeeecccccchhhhcCCCCEEEECCCC
Confidence 589999999999999999999999999999876432211 1122334455677776653
No 257
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.56 E-value=0.00024 Score=61.17 Aligned_cols=47 Identities=28% Similarity=0.378 Sum_probs=41.4
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l 124 (147)
.+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++
T Consensus 376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l 422 (529)
T PLN02520 376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV 422 (529)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 467899999997 69999999999999999999999988887776554
No 258
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=97.53 E-value=0.0004 Score=57.73 Aligned_cols=65 Identities=22% Similarity=0.284 Sum_probs=45.0
Q ss_pred CCCCCEEEEeCC---------------cCh-HHHHHHHHHHHCCCEEEEEeCChH-------------HHHHHHHHHH-H
Q 032110 77 MLPPYNVLITGS---------------TKG-IGYALAKEFLKAGDNVIICSRSAE-------------RVDSAVQSLR-E 126 (147)
Q Consensus 77 ~~~~k~~lVTG~---------------s~G-IG~~~a~~La~~Ga~V~i~~r~~~-------------~~~~~~~~l~-~ 126 (147)
+++||.++|||| ++| +|.+++++|..+|++|+++++..+ ..++..+.+. +
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 261 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLTPPGVKSIKVSTAEEMLEAALNE 261 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCCCCCcEEEEeccHHHHHHHHHHh
Confidence 488999999999 556 999999999999999998765321 2233323333 3
Q ss_pred HhCCeEEEEEcccCC
Q 032110 127 EFGEQHVVQNVMLAK 141 (147)
Q Consensus 127 ~~~~~~~~~~~dv~~ 141 (147)
..++.++++++....
T Consensus 262 ~~~~~D~~i~~Aavs 276 (390)
T TIGR00521 262 LAKDFDIFISAAAVA 276 (390)
T ss_pred hcccCCEEEEccccc
Confidence 345556666655443
No 259
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=97.53 E-value=0.00079 Score=56.63 Aligned_cols=36 Identities=22% Similarity=0.407 Sum_probs=32.4
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
+.++++||||+|.||..++++|+++|++|++++|..
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~ 154 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFF 154 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 345799999999999999999999999999998753
No 260
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=97.52 E-value=0.0002 Score=53.76 Aligned_cols=33 Identities=52% Similarity=0.746 Sum_probs=29.7
Q ss_pred EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~ 115 (147)
++||||+|.||.+++++|.++|+.|+.+.|+..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~ 33 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSN 33 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCST
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccc
Confidence 689999999999999999999999887777654
No 261
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.50 E-value=0.0002 Score=57.53 Aligned_cols=33 Identities=30% Similarity=0.536 Sum_probs=30.5
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
.++||||+|-||..++.+|++.|++|+++|.-.
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~ 34 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLS 34 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCC
Confidence 689999999999999999999999999998643
No 262
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.48 E-value=0.00047 Score=57.62 Aligned_cols=48 Identities=31% Similarity=0.434 Sum_probs=39.1
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLR 125 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~-~~~~~~~~~l~ 125 (147)
++++|+++|+|+++ +|.++|+.|+++|++|++++++. +.+++..+++.
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~ 50 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELG 50 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH
Confidence 46789999999766 99999999999999999999985 44554455553
No 263
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=97.47 E-value=0.00018 Score=56.29 Aligned_cols=32 Identities=25% Similarity=0.417 Sum_probs=28.3
Q ss_pred EEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCC
Q 032110 82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRS 113 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~ 113 (147)
.++||||+|+||.+++++|++.| ++|++.+|.
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~ 34 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKL 34 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCC
Confidence 37999999999999999999987 788888763
No 264
>PLN02206 UDP-glucuronate decarboxylase
Probab=97.45 E-value=0.00044 Score=58.22 Aligned_cols=37 Identities=24% Similarity=0.381 Sum_probs=33.4
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
-++++++||||+|.||..++++|.++|++|+++++..
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~ 153 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFF 153 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCC
Confidence 4667899999999999999999999999999988653
No 265
>PLN00016 RNA-binding protein; Provisional
Probab=97.44 E-value=0.00031 Score=57.50 Aligned_cols=38 Identities=42% Similarity=0.595 Sum_probs=34.2
Q ss_pred CCCEEEEe----CCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110 79 PPYNVLIT----GSTKGIGYALAKEFLKAGDNVIICSRSAER 116 (147)
Q Consensus 79 ~~k~~lVT----G~s~GIG~~~a~~La~~Ga~V~i~~r~~~~ 116 (147)
..+.++|| ||+|.||..+++.|+++|++|++++|+.+.
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~ 92 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP 92 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc
Confidence 34679999 999999999999999999999999998754
No 266
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=97.43 E-value=0.00012 Score=57.22 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=31.9
Q ss_pred EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~ 116 (147)
++|||++|.+|..++++|.+.|++|.++.|+.+.
T Consensus 2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~ 35 (285)
T TIGR03649 2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSS 35 (285)
T ss_pred EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 7999999999999999999999999999998753
No 267
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=97.43 E-value=0.00035 Score=53.68 Aligned_cols=40 Identities=30% Similarity=0.459 Sum_probs=36.3
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~ 121 (147)
.++|||++|.+|..++++|.++|++|.+..|+.+......
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~ 41 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA 41 (275)
T ss_pred eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc
Confidence 5899999999999999999999999999999988766543
No 268
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=97.42 E-value=0.00041 Score=55.88 Aligned_cols=36 Identities=31% Similarity=0.296 Sum_probs=31.6
Q ss_pred CEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCChHH
Q 032110 81 YNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAER 116 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~~~~ 116 (147)
++++|||++|.||..++++|++. |++|++++|+.+.
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~ 38 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDR 38 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHH
Confidence 36999999999999999999986 6999999987643
No 269
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=97.40 E-value=0.00032 Score=55.67 Aligned_cols=59 Identities=29% Similarity=0.391 Sum_probs=45.9
Q ss_pred EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-------HHHHHHhC-CeEEEEEcccCC
Q 032110 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV-------QSLREEFG-EQHVVQNVMLAK 141 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~-------~~l~~~~~-~~~~~~~~dv~~ 141 (147)
++||||+|-||.+++.+|.+.|++|+++.|++.+.+... +.+..... ..++++|+.+..
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~~~DavINLAG~~ 67 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVTLWEGLADALTLGIDAVINLAGEP 67 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCccccccchhhhcccCCCCEEEECCCCc
Confidence 589999999999999999999999999999887654322 22333222 478899988875
No 270
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=97.38 E-value=0.00044 Score=60.85 Aligned_cols=38 Identities=24% Similarity=0.233 Sum_probs=33.6
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCChHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAER 116 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~~~~ 116 (147)
.++.++||||+|.||..++++|+++ |++|++++|....
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~ 352 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDA 352 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchh
Confidence 5678999999999999999999986 7999999987643
No 271
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.37 E-value=0.00075 Score=53.09 Aligned_cols=47 Identities=34% Similarity=0.499 Sum_probs=41.2
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~ 125 (147)
..+|+++|+|+ ||+|++++..|++.|++|++++|+.++.++..+++.
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~ 161 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQ 161 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 45789999997 699999999999999999999999988887766654
No 272
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=97.35 E-value=0.00049 Score=56.37 Aligned_cols=37 Identities=19% Similarity=0.233 Sum_probs=33.5
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
-++|.++|||++|.||..+++.|.++|++|++++|..
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~ 55 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKK 55 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecc
Confidence 3567899999999999999999999999999998753
No 273
>PRK09620 hypothetical protein; Provisional
Probab=97.34 E-value=0.001 Score=51.43 Aligned_cols=35 Identities=31% Similarity=0.427 Sum_probs=31.3
Q ss_pred CCCCEEEEeCCc----------------ChHHHHHHHHHHHCCCEEEEEeC
Q 032110 78 LPPYNVLITGST----------------KGIGYALAKEFLKAGDNVIICSR 112 (147)
Q Consensus 78 ~~~k~~lVTG~s----------------~GIG~~~a~~La~~Ga~V~i~~r 112 (147)
|.||.++||+|. |.+|.++|++|+++|++|++++.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g 51 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHG 51 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeC
Confidence 468899999886 99999999999999999998764
No 274
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=97.34 E-value=0.00029 Score=55.22 Aligned_cols=35 Identities=31% Similarity=0.423 Sum_probs=31.8
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~ 116 (147)
.++|||++|.||..++++|.++|++|+.++|....
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~ 36 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDG 36 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcc
Confidence 38999999999999999999999999999986543
No 275
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=97.34 E-value=0.00034 Score=54.46 Aligned_cols=31 Identities=29% Similarity=0.492 Sum_probs=29.5
Q ss_pred EEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS 113 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~ 113 (147)
++||||+|.||..+++.|.++|++|++++|.
T Consensus 2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~ 32 (287)
T TIGR01214 2 ILITGANGQLGRELVQQLSPEGRVVVALTSS 32 (287)
T ss_pred EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence 7999999999999999999999999999885
No 276
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=97.33 E-value=0.00035 Score=56.20 Aligned_cols=31 Identities=23% Similarity=0.475 Sum_probs=26.6
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCE-EEEEeC
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDN-VIICSR 112 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~-V~i~~r 112 (147)
+++||||+|+||..++++|+++|++ |+..++
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~ 33 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDK 33 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecC
Confidence 5899999999999999999999976 544554
No 277
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.31 E-value=0.00095 Score=50.49 Aligned_cols=47 Identities=28% Similarity=0.438 Sum_probs=40.7
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS 123 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~ 123 (147)
.+++||++.|.|. |.+|..+++.|.+.|++|++.+++.+.+++..++
T Consensus 24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~ 70 (200)
T cd01075 24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAEL 70 (200)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 4678999999996 5899999999999999999999998877666554
No 278
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=97.28 E-value=0.00026 Score=56.13 Aligned_cols=58 Identities=19% Similarity=0.222 Sum_probs=39.6
Q ss_pred EEeCCcChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCCc
Q 032110 84 LITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 84 lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~~ 145 (147)
+||||+|.||..++++|+++| ++|.++++....... ..+ ...+. ..++.+|++|..++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~-~~~~~-~~~~~~Di~d~~~l 60 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDL-QKSGV-KEYIQGDITDPESL 60 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhh-hcccc-eeEEEeccccHHHH
Confidence 699999999999999999999 789998887643221 111 11111 22667777775543
No 279
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.27 E-value=0.00058 Score=57.03 Aligned_cols=49 Identities=33% Similarity=0.348 Sum_probs=38.5
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~ 126 (147)
++.+|+++|+|+++ +|.++++.|++.|++|++.+++........+++.+
T Consensus 2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~ 50 (447)
T PRK02472 2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE 50 (447)
T ss_pred CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh
Confidence 46789999999875 99999999999999999999876443334444443
No 280
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=97.22 E-value=0.0014 Score=50.61 Aligned_cols=59 Identities=25% Similarity=0.365 Sum_probs=42.9
Q ss_pred EEEEeC-CcChHHHHHHHHHHHCCCEEEEEeCCh---------------HHHHHHHHHHHHHhCCeEEEEEcccC
Q 032110 82 NVLITG-STKGIGYALAKEFLKAGDNVIICSRSA---------------ERVDSAVQSLREEFGEQHVVQNVMLA 140 (147)
Q Consensus 82 ~~lVTG-~s~GIG~~~a~~La~~Ga~V~i~~r~~---------------~~~~~~~~~l~~~~~~~~~~~~~dv~ 140 (147)
+=.||. ++||||+++|++|+++|++|+++++.. +..++.++++.+.++..++++++...
T Consensus 16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l~~~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv 90 (227)
T TIGR02114 16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRALKPEPHPNLSIREIETTKDLLITLKELVQEHDILIHSMAV 90 (227)
T ss_pred ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhhcccccCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEe
Confidence 345554 578999999999999999999987421 22344556666777877888876653
No 281
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=97.22 E-value=0.00074 Score=59.32 Aligned_cols=36 Identities=22% Similarity=0.425 Sum_probs=31.6
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHC--CCEEEEEeCC
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRS 113 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~--Ga~V~i~~r~ 113 (147)
.++|+++||||+|.||..+++.|.++ |++|+++++.
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~ 41 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKL 41 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 34678999999999999999999988 6889888874
No 282
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.19 E-value=0.0022 Score=45.67 Aligned_cols=47 Identities=26% Similarity=0.424 Sum_probs=39.7
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLR 125 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l~ 125 (147)
+++++++|+|+ |++|..+++.|.+.| .+|++++|+.+..++..+++.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~ 64 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFG 64 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence 56778999986 899999999999996 789999999888777666544
No 283
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.12 E-value=0.0035 Score=49.88 Aligned_cols=51 Identities=24% Similarity=0.308 Sum_probs=43.7
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHHHh
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEF 128 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l~~~~ 128 (147)
...+|.++|.| +||.|++++..|+..|+ +|++++|+.++.++.++++...+
T Consensus 124 ~~~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~ 175 (284)
T PRK12549 124 DASLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF 175 (284)
T ss_pred CccCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC
Confidence 45678899998 78999999999999996 79999999999988887775543
No 284
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.0022 Score=55.77 Aligned_cols=58 Identities=22% Similarity=0.287 Sum_probs=40.2
Q ss_pred EEEEeCCcChHHHHHHHHHH--HCCCEEEEEeCChHHHHHHHHHHHHHhC-CeEEEEEcccCC
Q 032110 82 NVLITGSTKGIGYALAKEFL--KAGDNVIICSRSAERVDSAVQSLREEFG-EQHVVQNVMLAK 141 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La--~~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~~~dv~~ 141 (147)
+++||||+|.||..+++.|+ ..|++|++++|+... .. ..++....+ ....++..|+++
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~-~~~~~~~~~~~~v~~~~~Dl~~ 62 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SR-LEALAAYWGADRVVPLVGDLTE 62 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HH-HHHHHHhcCCCcEEEEecccCC
Confidence 58999999999999999999 589999999996532 11 122222221 224556677766
No 285
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=97.10 E-value=0.004 Score=52.07 Aligned_cols=47 Identities=26% Similarity=0.371 Sum_probs=41.3
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~ 122 (147)
.+.+...++|+|++|++|+-+++.|.++|..|..+-|+.++.++...
T Consensus 75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~ 121 (411)
T KOG1203|consen 75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG 121 (411)
T ss_pred CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence 34566799999999999999999999999999999999988776655
No 286
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.08 E-value=0.0044 Score=49.45 Aligned_cols=43 Identities=23% Similarity=0.366 Sum_probs=37.8
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
+.+.||+++|.|. |++|.++++.|...|++|++++|+.++.++
T Consensus 147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~ 189 (287)
T TIGR02853 147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR 189 (287)
T ss_pred CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4678999999995 779999999999999999999999876543
No 287
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.06 E-value=0.0034 Score=50.10 Aligned_cols=52 Identities=25% Similarity=0.304 Sum_probs=44.7
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHHHh
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEF 128 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l~~~~ 128 (147)
.+.+++.++|.| +||-+++++..|++.| .+|+++.|+.++++++++.+.+.+
T Consensus 122 ~~~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~ 174 (283)
T COG0169 122 VDVTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG 174 (283)
T ss_pred cccCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc
Confidence 345688999997 8999999999999999 579999999999998888777543
No 288
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=97.05 E-value=0.0014 Score=49.86 Aligned_cols=33 Identities=30% Similarity=0.463 Sum_probs=31.1
Q ss_pred EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~ 115 (147)
++|+|++|.+|..+++.|.+.+++|.++.|+..
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~ 33 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS 33 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc
Confidence 689999999999999999999999999999873
No 289
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=97.01 E-value=0.0029 Score=47.47 Aligned_cols=65 Identities=22% Similarity=0.323 Sum_probs=41.6
Q ss_pred CCCCEEEEeCC----------------cChHHHHHHHHHHHCCCEEEEEeCCh-------------HHHHHHHHHHHHHh
Q 032110 78 LPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRSA-------------ERVDSAVQSLREEF 128 (147)
Q Consensus 78 ~~~k~~lVTG~----------------s~GIG~~~a~~La~~Ga~V~i~~r~~-------------~~~~~~~~~l~~~~ 128 (147)
|+||.++||+| +|-+|.++|+++..+|++|+++.... +..++..+.+.+..
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~p~~~~~i~v~sa~em~~~~~~~~ 80 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPPPPGVKVIRVESAEEMLEAVKELL 80 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----TTEEEEE-SSHHHHHHHHHHHG
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccccccceEEEecchhhhhhhhcccc
Confidence 45677777765 57799999999999999999876542 23556666666666
Q ss_pred CCeEEEEEcccCCC
Q 032110 129 GEQHVVQNVMLAKG 142 (147)
Q Consensus 129 ~~~~~~~~~dv~~~ 142 (147)
++.++++.+....+
T Consensus 81 ~~~Di~I~aAAVsD 94 (185)
T PF04127_consen 81 PSADIIIMAAAVSD 94 (185)
T ss_dssp GGGSEEEE-SB--S
T ss_pred CcceeEEEecchhh
Confidence 66677776555443
No 290
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=97.01 E-value=0.0027 Score=50.37 Aligned_cols=32 Identities=28% Similarity=0.534 Sum_probs=28.7
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
+++||||+|.||..+++.|.++| +|++++|..
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~ 33 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHS 33 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEecccc
Confidence 59999999999999999999999 788888753
No 291
>PRK05865 hypothetical protein; Provisional
Probab=96.99 E-value=0.0014 Score=59.43 Aligned_cols=33 Identities=24% Similarity=0.456 Sum_probs=31.1
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
+++|||++|+||..++++|+++|++|++++|+.
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~ 34 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHR 34 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCc
Confidence 589999999999999999999999999999874
No 292
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=96.88 E-value=0.0038 Score=53.21 Aligned_cols=46 Identities=24% Similarity=0.399 Sum_probs=40.0
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS 123 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~ 123 (147)
.+.+|.++|+|+ ||+|++++..|++.|++|++.+|+.++.++..++
T Consensus 329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~ 374 (477)
T PRK09310 329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR 374 (477)
T ss_pred CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 467889999995 7999999999999999999999998877766554
No 293
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=96.87 E-value=0.002 Score=53.08 Aligned_cols=37 Identities=19% Similarity=0.354 Sum_probs=33.0
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAE 115 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~ 115 (147)
++.+++||||+|.+|..++.+|.+.+ .+|.+.|..+.
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~ 41 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPT 41 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcc
Confidence 46689999999999999999999999 78999888764
No 294
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=96.84 E-value=0.0017 Score=51.27 Aligned_cols=31 Identities=23% Similarity=0.358 Sum_probs=26.4
Q ss_pred EEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS 113 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~ 113 (147)
++||||+|.||..++++|+++|++++++.++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~ 32 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN 32 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecC
Confidence 6999999999999999999999865554433
No 295
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.83 E-value=0.0049 Score=45.56 Aligned_cols=45 Identities=20% Similarity=0.350 Sum_probs=38.3
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA 120 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~ 120 (147)
.++.+|.++|.|++.-+|..+++.|.++|++|.++.|+.+.+.+.
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~~ 84 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKEH 84 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHHH
Confidence 468999999999866679999999999999999999987655443
No 296
>PLN02503 fatty acyl-CoA reductase 2
Probab=96.83 E-value=0.0052 Score=53.86 Aligned_cols=38 Identities=24% Similarity=0.355 Sum_probs=32.9
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCC---EEEEEeCCh
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGD---NVIICSRSA 114 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga---~V~i~~r~~ 114 (147)
.+++|+++||||+|.||..+++.|++.+. +|+++.|..
T Consensus 116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k 156 (605)
T PLN02503 116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAK 156 (605)
T ss_pred hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 36899999999999999999999998663 688888854
No 297
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.81 E-value=0.0083 Score=47.83 Aligned_cols=51 Identities=16% Similarity=0.270 Sum_probs=42.7
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHHHh
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEF 128 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l~~~~ 128 (147)
..++|.++|-| +||-+++++..|++.|+ +|++++|+.++.+++++.+...+
T Consensus 124 ~~~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~ 175 (283)
T PRK14027 124 NAKLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAV 175 (283)
T ss_pred CcCCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc
Confidence 35678899998 69999999999999996 79999999999888877765433
No 298
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.76 E-value=0.0065 Score=48.27 Aligned_cols=48 Identities=17% Similarity=0.264 Sum_probs=41.0
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLR 125 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l~ 125 (147)
.+++|.++|-| +||.+++++..|++.|+ +|+++.|+.++.+++++++.
T Consensus 122 ~~~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~ 170 (282)
T TIGR01809 122 PLAGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV 170 (282)
T ss_pred ccCCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence 35688899987 69999999999999996 69999999998888776653
No 299
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.72 E-value=0.0053 Score=51.06 Aligned_cols=57 Identities=23% Similarity=0.367 Sum_probs=43.5
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG 142 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~ 142 (147)
+.++|-|+ |++|..+|+.|++.| .+|++.+|+.++..+..+.... ..-...+|+.+.
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~----~v~~~~vD~~d~ 59 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGG----KVEALQVDAADV 59 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccc----cceeEEecccCh
Confidence 46788886 999999999999999 8999999999887766544322 344556666654
No 300
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.69 E-value=0.018 Score=42.41 Aligned_cols=63 Identities=19% Similarity=0.249 Sum_probs=41.1
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH------HHHHhCCeEEEEEccc
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS------LREEFGEQHVVQNVML 139 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~------l~~~~~~~~~~~~~dv 139 (147)
..+.||+++|.| -|-+|+.+|+.|...|++|++++.++-.+-++..+ +.+.....++++.+-+
T Consensus 19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~~~~~a~~~adi~vtaTG 87 (162)
T PF00670_consen 19 LMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVMTLEEALRDADIFVTATG 87 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-HHHHTTT-SEEEE-SS
T ss_pred eeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEecCHHHHHhhCCEEEECCC
Confidence 467899999998 88999999999999999999999998665544321 2333445556655433
No 301
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=96.66 E-value=0.0034 Score=48.49 Aligned_cols=58 Identities=21% Similarity=0.236 Sum_probs=37.3
Q ss_pred EeCCcChHHHHHHHHHHHCCC--EEEEEeCChHH---HHHHHHHH-----HH----HhCCeEEEEEcccCCC
Q 032110 85 ITGSTKGIGYALAKEFLKAGD--NVIICSRSAER---VDSAVQSL-----RE----EFGEQHVVQNVMLAKG 142 (147)
Q Consensus 85 VTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~---~~~~~~~l-----~~----~~~~~~~~~~~dv~~~ 142 (147)
|||++|.+|..+.++|++.+. +|+++.|..+. .++..+.+ .. .......++..|++++
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~ 72 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQP 72 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSG
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEecccccc
Confidence 799999999999999999886 89999997632 22222211 11 1245577889999874
No 302
>PRK12320 hypothetical protein; Provisional
Probab=96.64 E-value=0.0059 Score=54.36 Aligned_cols=34 Identities=21% Similarity=0.449 Sum_probs=31.3
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~ 115 (147)
+++||||+|.||..++++|.++|++|++++|...
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~ 35 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPH 35 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 5899999999999999999999999999998653
No 303
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.59 E-value=0.0045 Score=50.84 Aligned_cols=57 Identities=21% Similarity=0.427 Sum_probs=41.2
Q ss_pred EEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 83 VLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
++|-|+ |.+|..+++.|++++- +|++.+|+.+++++..+++ .+.....+.+|+.|..
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~---~~~~~~~~~~d~~~~~ 59 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL---LGDRVEAVQVDVNDPE 59 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-----TTTTEEEEE--TTTHH
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc---cccceeEEEEecCCHH
Confidence 588999 9999999999999884 8999999999988877665 3334566677777643
No 304
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=96.56 E-value=0.006 Score=48.95 Aligned_cols=38 Identities=26% Similarity=0.333 Sum_probs=33.4
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
...++.++||||+|.||..++..|..+|+.|+++|.-.
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~f 61 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYF 61 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEeccc
Confidence 34567999999999999999999999999999988643
No 305
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=96.52 E-value=0.016 Score=44.78 Aligned_cols=59 Identities=24% Similarity=0.355 Sum_probs=40.6
Q ss_pred EEEEeCCc-ChHHHHHHHHHHHCCCEEEEEeCChH---------------HHHHHHHHHHHHhCCeEEEEEcccC
Q 032110 82 NVLITGST-KGIGYALAKEFLKAGDNVIICSRSAE---------------RVDSAVQSLREEFGEQHVVQNVMLA 140 (147)
Q Consensus 82 ~~lVTG~s-~GIG~~~a~~La~~Ga~V~i~~r~~~---------------~~~~~~~~l~~~~~~~~~~~~~dv~ 140 (147)
+-.||..+ |+||.+++++|+++|++|+++++... ..++..+.+.+..+..++++++...
T Consensus 17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAv 91 (229)
T PRK06732 17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAV 91 (229)
T ss_pred ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccCCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCcc
Confidence 55778655 45999999999999999999876422 1222334455555666777776655
No 306
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.46 E-value=0.022 Score=47.79 Aligned_cols=47 Identities=19% Similarity=0.347 Sum_probs=40.3
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSL 124 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l 124 (147)
.+.+|.++|.| +||+|..++..|+..|+ +++++.|+.++.++..+++
T Consensus 178 ~l~~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~ 225 (414)
T PRK13940 178 NISSKNVLIIG-AGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF 225 (414)
T ss_pred CccCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence 57889999998 59999999999999995 7999999988877665554
No 307
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=96.45 E-value=0.0037 Score=49.08 Aligned_cols=31 Identities=23% Similarity=0.440 Sum_probs=27.9
Q ss_pred EEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC
Q 032110 83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRS 113 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~ 113 (147)
++|||++|.||..+++.|.++|+ .|++++|.
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~ 32 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNL 32 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecC
Confidence 58999999999999999999997 68888764
No 308
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.43 E-value=0.019 Score=42.70 Aligned_cols=42 Identities=29% Similarity=0.478 Sum_probs=33.6
Q ss_pred EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Q 032110 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~ 125 (147)
+.|.| +|-+|..+|..++..|++|.+++++++.+++..+.+.
T Consensus 2 V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~ 43 (180)
T PF02737_consen 2 VAVIG-AGTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE 43 (180)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred EEEEc-CCHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence 55666 5999999999999999999999999988776555443
No 309
>PLN02996 fatty acyl-CoA reductase
Probab=96.43 E-value=0.015 Score=49.68 Aligned_cols=37 Identities=19% Similarity=0.342 Sum_probs=32.1
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCC---CEEEEEeCCh
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAG---DNVIICSRSA 114 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~G---a~V~i~~r~~ 114 (147)
++||+++||||+|.||..+++.|++.+ .+|+++.|..
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~ 48 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAS 48 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCC
Confidence 688999999999999999999999765 3688888865
No 310
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.41 E-value=0.029 Score=44.91 Aligned_cols=41 Identities=27% Similarity=0.400 Sum_probs=36.1
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
.+.+++++|.|. |++|+.++..|...|++|++++|+.+..+
T Consensus 149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~ 189 (296)
T PRK08306 149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA 189 (296)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 467899999995 78999999999999999999999976543
No 311
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=96.30 E-value=0.0033 Score=49.21 Aligned_cols=29 Identities=14% Similarity=0.293 Sum_probs=25.6
Q ss_pred EEeCCcChHHHHHHHHHHHCCCEEEEEeC
Q 032110 84 LITGSTKGIGYALAKEFLKAGDNVIICSR 112 (147)
Q Consensus 84 lVTG~s~GIG~~~a~~La~~Ga~V~i~~r 112 (147)
+||||+|.||..+++.|++.|++|++..+
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~ 29 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRT 29 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeec
Confidence 59999999999999999999988776543
No 312
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.22 E-value=0.025 Score=43.09 Aligned_cols=43 Identities=33% Similarity=0.486 Sum_probs=37.1
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l 124 (147)
.+.|.||+|.+|.+++..|++.|++|++.+|++++.++...+.
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~ 44 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA 44 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence 4788898999999999999999999999999998877665543
No 313
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.14 E-value=0.041 Score=43.96 Aligned_cols=49 Identities=14% Similarity=0.206 Sum_probs=38.8
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCCh---HHHHHHHHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA---ERVDSAVQSLRE 126 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~---~~~~~~~~~l~~ 126 (147)
.+++|.++|-| +||-+++++..|+..|+ +|++++|+. ++.+++++++..
T Consensus 121 ~~~~k~vlvlG-aGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~ 173 (288)
T PRK12749 121 DIKGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE 173 (288)
T ss_pred CcCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhh
Confidence 46788999998 57779999999999995 799999995 466666555543
No 314
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=96.11 E-value=0.017 Score=42.29 Aligned_cols=47 Identities=30% Similarity=0.406 Sum_probs=38.2
Q ss_pred EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCe
Q 032110 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~ 131 (147)
++.+|..+-+|+++|.+|.++|.+|+++ +.+..+.+..++..+..+.
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~~~~~~~ 47 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAPEECQSN 47 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcCHHhhcc
Confidence 4789999999999999999999999998 6667777776766554443
No 315
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.10 E-value=0.029 Score=44.83 Aligned_cols=57 Identities=16% Similarity=0.274 Sum_probs=42.8
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEccc
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVML 139 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv 139 (147)
..+.||.++|.|.++-.|+.++..|.++|+.|.++.+....+.+ ...+.++++++-.
T Consensus 155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L~~-------~~~~aDIvI~AtG 211 (283)
T PRK14192 155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNLPE-------LVKQADIIVGAVG 211 (283)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhHHH-------HhccCCEEEEccC
Confidence 46899999999977779999999999999999999885433322 2244566666543
No 316
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=96.04 E-value=0.024 Score=49.85 Aligned_cols=56 Identities=29% Similarity=0.166 Sum_probs=37.2
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEE-EEeCChHHHHHHHHHHHHHhCCeEEEEEccc
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVI-ICSRSAERVDSAVQSLREEFGEQHVVQNVML 139 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~-i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv 139 (147)
++++|||++|.||..+++.|.++|++|. ..++ ....+.....+.. . +.++++|+..
T Consensus 381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~~~~-l~d~~~v~~~i~~-~-~pd~Vih~Aa 437 (668)
T PLN02260 381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEYGKGR-LEDRSSLLADIRN-V-KPTHVFNAAG 437 (668)
T ss_pred ceEEEECCCchHHHHHHHHHHhCCCeEEeeccc-cccHHHHHHHHHh-h-CCCEEEECCc
Confidence 4699999999999999999999999984 3332 2222222222222 1 3467777764
No 317
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=96.02 E-value=0.025 Score=45.19 Aligned_cols=43 Identities=19% Similarity=0.189 Sum_probs=36.7
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA 120 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~ 120 (147)
..|..++|+|+++++|..+++.+...|++|+.+++++++.+.+
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~ 192 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLL 192 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 3578999999999999999998889999999988887665544
No 318
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.01 E-value=0.031 Score=36.59 Aligned_cols=41 Identities=34% Similarity=0.498 Sum_probs=33.5
Q ss_pred EEEEeCCcChHHHHHHHHHHHCC---CEEEEE-eCChHHHHHHHHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAG---DNVIIC-SRSAERVDSAVQSL 124 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~G---a~V~i~-~r~~~~~~~~~~~l 124 (147)
..+| |+|.+|.++++.|.+.| .+|.+. .|++++.++..+++
T Consensus 2 I~iI--G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~ 46 (96)
T PF03807_consen 2 IGII--GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY 46 (96)
T ss_dssp EEEE--STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred EEEE--CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence 3445 69999999999999999 899965 99998887765543
No 319
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=96.00 E-value=0.032 Score=47.65 Aligned_cols=64 Identities=22% Similarity=0.275 Sum_probs=45.2
Q ss_pred CCCCCEEEEeCC----------------cChHHHHHHHHHHHCCCEEEEEeCC-------------hHHHHHHHHHHHHH
Q 032110 77 MLPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRS-------------AERVDSAVQSLREE 127 (147)
Q Consensus 77 ~~~~k~~lVTG~----------------s~GIG~~~a~~La~~Ga~V~i~~r~-------------~~~~~~~~~~l~~~ 127 (147)
+|.||.++||+| +|-+|+++|+++..+|++|+++.-. -+..++..+++.+.
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~~~p~~v~~i~V~ta~eM~~av~~~ 332 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDLADPQGVKVIHVESARQMLAAVEAA 332 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCCCCCCCceEEEecCHHHHHHHHHhh
Confidence 589999999986 3669999999999999999987521 12355666666665
Q ss_pred hCCeEEEEE-cccCC
Q 032110 128 FGEQHVVQN-VMLAK 141 (147)
Q Consensus 128 ~~~~~~~~~-~dv~~ 141 (147)
++. ++++. ..|.|
T Consensus 333 ~~~-Di~I~aAAVaD 346 (475)
T PRK13982 333 LPA-DIAIFAAAVAD 346 (475)
T ss_pred CCC-CEEEEeccccc
Confidence 553 44554 44444
No 320
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=95.98 E-value=0.07 Score=39.37 Aligned_cols=43 Identities=30% Similarity=0.250 Sum_probs=36.3
Q ss_pred CCCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 75 ~~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
...+.||++.|.| .|.||+++++.|...|++|+.++|.....+
T Consensus 31 ~~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~ 73 (178)
T PF02826_consen 31 GRELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEE 73 (178)
T ss_dssp BS-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred ccccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhh
Confidence 3467899999997 799999999999999999999999887544
No 321
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.96 E-value=0.025 Score=44.88 Aligned_cols=44 Identities=20% Similarity=0.261 Sum_probs=37.5
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHH
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSL 124 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~l 124 (147)
+|.++|.| +||-+++++..|++.|+ +|++++|+.++.+++++.+
T Consensus 122 ~~~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~ 166 (272)
T PRK12550 122 DLVVALRG-SGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY 166 (272)
T ss_pred CCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence 45788887 69999999999999996 5999999999888776554
No 322
>PRK06849 hypothetical protein; Provisional
Probab=95.96 E-value=0.031 Score=46.04 Aligned_cols=36 Identities=33% Similarity=0.442 Sum_probs=32.8
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
+.|+++|||++..+|+.+++.|.+.|++|++++.+.
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~ 38 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLK 38 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 457899999999999999999999999999998764
No 323
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=95.92 E-value=0.028 Score=44.78 Aligned_cols=40 Identities=15% Similarity=0.117 Sum_probs=34.6
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSA 120 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~ 120 (147)
.+++|.|+++++|..+++.....|+ +|+.+++++++.+.+
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~ 196 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLL 196 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence 7999999999999999988888998 799998887765543
No 324
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.91 E-value=0.031 Score=40.11 Aligned_cols=44 Identities=23% Similarity=0.312 Sum_probs=38.3
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
.+++||.++|-|.+.-.|..++..|.++|+.|.+++++...+++
T Consensus 24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~ 67 (140)
T cd05212 24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS 67 (140)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence 36899999999999999999999999999999999875544444
No 325
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.91 E-value=0.0085 Score=46.56 Aligned_cols=64 Identities=19% Similarity=0.277 Sum_probs=40.4
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCE-----------------EEEEeCC---------hHHHHHHHHHHHHHhCCeE
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDN-----------------VIICSRS---------AERVDSAVQSLREEFGEQH 132 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~-----------------V~i~~r~---------~~~~~~~~~~l~~~~~~~~ 132 (147)
.+|++++||+++|||..++..+..++-. |...+.. ...++...+..++.+++..
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~ 84 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRD 84 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCcee
Confidence 4679999999999997777666554422 2221110 1223445555667778888
Q ss_pred EEEEcccCCC
Q 032110 133 VVQNVMLAKG 142 (147)
Q Consensus 133 ~~~~~dv~~~ 142 (147)
++++..+.-+
T Consensus 85 iiI~NAG~lg 94 (253)
T KOG1204|consen 85 IIIHNAGSLG 94 (253)
T ss_pred EEEecCCCcc
Confidence 8888776643
No 326
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=95.88 E-value=0.032 Score=44.27 Aligned_cols=41 Identities=17% Similarity=0.199 Sum_probs=35.5
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
.|.+++|+|+++++|..+++.+...|++|+.+++++++.+.
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~ 178 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAY 178 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 57799999999999999999888999999998888766543
No 327
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.85 E-value=0.035 Score=44.47 Aligned_cols=42 Identities=19% Similarity=0.293 Sum_probs=37.4
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
.+.||.++|.|.+.-+|+.++..|..+|++|+++.+....++
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~ 196 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMA 196 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH
Confidence 689999999999999999999999999999999988654443
No 328
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=95.82 E-value=0.054 Score=47.73 Aligned_cols=70 Identities=19% Similarity=0.185 Sum_probs=49.1
Q ss_pred CCCCCCEEEEeCCc-ChHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHHHHH---hCCeEEEEEcccCCCCCc
Q 032110 76 PMLPPYNVLITGST-KGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREE---FGEQHVVQNVMLAKGMKW 145 (147)
Q Consensus 76 ~~~~~k~~lVTG~s-~GIG~~~a~~La~~Ga~V~i~~r~~~-~~~~~~~~l~~~---~~~~~~~~~~dv~~~~~~ 145 (147)
....+|+++|||++ +.||.+++..|+..|++|+++.-+.+ +-.+..+.|-.. ++...+++..+..+-.++
T Consensus 392 ~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDV 466 (866)
T COG4982 392 GTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDV 466 (866)
T ss_pred CCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhH
Confidence 35678999999977 67999999999999999999755433 333344444443 344567777776655444
No 329
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=95.82 E-value=0.033 Score=45.13 Aligned_cols=42 Identities=17% Similarity=0.205 Sum_probs=36.1
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA 120 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~ 120 (147)
.|.+++|.|+++++|..+++.+...|++|+.+++++++.+.+
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~ 199 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLL 199 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 578999999999999999998889999999888887665433
No 330
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=95.82 E-value=0.075 Score=44.55 Aligned_cols=45 Identities=27% Similarity=0.499 Sum_probs=38.3
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQ 122 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~ 122 (147)
.+.+++++|.|+ |.+|..+++.|...| .+|++++|+.++.++.++
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~ 222 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAK 222 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH
Confidence 477889999985 999999999999999 789999999877655443
No 331
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=95.81 E-value=0.015 Score=48.00 Aligned_cols=64 Identities=17% Similarity=0.283 Sum_probs=54.6
Q ss_pred EEEEeCCcChHHHHHHHHHHH----CCCEEEEEeCChHHHHHHHHHHHHHhCC---eEEEEEcccCCCCCc
Q 032110 82 NVLITGSTKGIGYALAKEFLK----AGDNVIICSRSAERVDSAVQSLREEFGE---QHVVQNVMLAKGMKW 145 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~----~Ga~V~i~~r~~~~~~~~~~~l~~~~~~---~~~~~~~dv~~~~~~ 145 (147)
-++|-|++|.-|.-+++++.. .|..+.+.+||++++++.++++.+..+. ..+++.+|++|+.++
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl 77 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASL 77 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHH
Confidence 479999999999999999998 8889999999999999999998877643 245788999887654
No 332
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=95.81 E-value=0.038 Score=42.79 Aligned_cols=42 Identities=29% Similarity=0.287 Sum_probs=36.6
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
..++.++|+|+++++|.++++.+...|++|+++++++++.+.
T Consensus 143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 184 (325)
T cd08253 143 KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAEL 184 (325)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 357899999999999999999999999999999987765543
No 333
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=95.77 E-value=0.039 Score=42.66 Aligned_cols=41 Identities=29% Similarity=0.379 Sum_probs=35.9
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
..++.++|+|+++++|..+++.+...|++|++++++.+..+
T Consensus 138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~ 178 (323)
T cd05276 138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLE 178 (323)
T ss_pred CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 35779999999999999999999999999999988766544
No 334
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.71 E-value=0.058 Score=40.74 Aligned_cols=36 Identities=31% Similarity=0.402 Sum_probs=31.1
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS 113 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~ 113 (147)
.+.+++++|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 46677888887 88999999999999995 79998876
No 335
>PLN02494 adenosylhomocysteinase
Probab=95.68 E-value=0.064 Score=45.79 Aligned_cols=40 Identities=23% Similarity=0.261 Sum_probs=35.3
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~ 117 (147)
.+.||+++|.| .|.||+.+++.+...|++|+++++++.+.
T Consensus 251 ~LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~ 290 (477)
T PLN02494 251 MIAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDPICA 290 (477)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhh
Confidence 47899999998 66999999999999999999999887643
No 336
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.67 E-value=0.035 Score=37.51 Aligned_cols=54 Identities=30% Similarity=0.334 Sum_probs=38.8
Q ss_pred EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCCC
Q 032110 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGMK 144 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~~ 144 (147)
++|.| .+.+|+.+++.|.+.+.+|++++++++..++. .+.+ ..++..|.++...
T Consensus 1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~----~~~~---~~~i~gd~~~~~~ 54 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRDPERVEEL----REEG---VEVIYGDATDPEV 54 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHH----HHTT---SEEEES-TTSHHH
T ss_pred eEEEc-CCHHHHHHHHHHHhCCCEEEEEECCcHHHHHH----Hhcc---cccccccchhhhH
Confidence 46776 56899999999999777999999998775544 3322 3467788777543
No 337
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=95.66 E-value=0.096 Score=43.26 Aligned_cols=42 Identities=26% Similarity=0.285 Sum_probs=35.2
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA 120 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~ 120 (147)
+.++.++|.|+ |.+|+..++.+...|++|++++++.++++++
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l 206 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQL 206 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHH
Confidence 45567888875 8999999999999999999999998766544
No 338
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.66 E-value=0.053 Score=41.75 Aligned_cols=55 Identities=24% Similarity=0.393 Sum_probs=40.5
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG 142 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~ 142 (147)
.++|-| .|-+|+.+|+.|.+.|++|++++++++..++...+- . ...++..|.+++
T Consensus 2 ~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~---~--~~~~v~gd~t~~ 56 (225)
T COG0569 2 KIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE---L--DTHVVIGDATDE 56 (225)
T ss_pred EEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh---c--ceEEEEecCCCH
Confidence 456665 788999999999999999999999998876633311 1 135566666653
No 339
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=95.65 E-value=0.048 Score=42.84 Aligned_cols=41 Identities=29% Similarity=0.393 Sum_probs=35.7
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
.+..++|+|+++++|.++++.+...|++|+++.++.+..+.
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~ 202 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKI 202 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence 46789999999999999999999999999998887765443
No 340
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=95.63 E-value=0.048 Score=42.96 Aligned_cols=40 Identities=23% Similarity=0.359 Sum_probs=34.9
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
.|.+++|.|+++++|..+++.....|++|+.+++++++.+
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~ 182 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVA 182 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 5779999999999999999998899999998888776544
No 341
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.62 E-value=0.072 Score=42.16 Aligned_cols=42 Identities=24% Similarity=0.387 Sum_probs=35.0
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS 123 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~ 123 (147)
+.+.|.| .|.+|..++..|+..|++|++++++++.+++..++
T Consensus 5 ~kI~vIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 46 (292)
T PRK07530 5 KKVGVIG-AGQMGNGIAHVCALAGYDVLLNDVSADRLEAGLAT 46 (292)
T ss_pred CEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Confidence 3566666 79999999999999999999999999887765443
No 342
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.58 E-value=0.067 Score=43.73 Aligned_cols=37 Identities=30% Similarity=0.442 Sum_probs=31.8
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCCh
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA 114 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~ 114 (147)
.++++.++|.| .||+|..+++.|+..|. ++.++|++.
T Consensus 21 ~L~~~~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 21 KIREKHVLIVG-AGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred hhcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 46777899998 68999999999999996 799998863
No 343
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=95.56 E-value=0.015 Score=46.93 Aligned_cols=32 Identities=22% Similarity=0.366 Sum_probs=26.4
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCC--EEEEEeC
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGD--NVIICSR 112 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r 112 (147)
+.++||||+|.||...++.+..+.. +|+.+|.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~Dk 34 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDK 34 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEec
Confidence 3689999999999999999998774 4666654
No 344
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=95.52 E-value=0.081 Score=44.64 Aligned_cols=41 Identities=17% Similarity=0.228 Sum_probs=36.3
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
.+.||+++|.| .|.||+.+++.+...|++|+++++++.+..
T Consensus 209 ~l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~ 249 (425)
T PRK05476 209 LIAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICAL 249 (425)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence 46899999999 579999999999999999999999876643
No 345
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.48 E-value=0.037 Score=44.62 Aligned_cols=43 Identities=16% Similarity=0.242 Sum_probs=37.8
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
++.||.+.|.|.++-+|+.++..|.++|+.|.++.+.....++
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e 198 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKA 198 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHH
Confidence 6899999999999999999999999999999999776554443
No 346
>PRK08655 prephenate dehydrogenase; Provisional
Probab=95.46 E-value=0.047 Score=46.08 Aligned_cols=40 Identities=25% Similarity=0.403 Sum_probs=34.6
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~ 121 (147)
++.|.||.|++|..++..|.+.|++|++++|+++..++..
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a 41 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA 41 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH
Confidence 5789999999999999999999999999999987654433
No 347
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=95.46 E-value=0.062 Score=42.09 Aligned_cols=41 Identities=27% Similarity=0.395 Sum_probs=36.2
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
..++.++|+|+++++|.++++.+...|++|+++++++++.+
T Consensus 165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~ 205 (342)
T cd08266 165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLE 205 (342)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 35779999999999999999999999999999998876554
No 348
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=95.41 E-value=0.059 Score=45.18 Aligned_cols=46 Identities=24% Similarity=0.413 Sum_probs=38.5
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQS 123 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~ 123 (147)
++.+++++|.| +|.+|..+++.|...|+ +|++++|+.+..++.+.+
T Consensus 179 ~~~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~ 225 (423)
T PRK00045 179 DLSGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEE 225 (423)
T ss_pred CccCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence 46788999998 59999999999999996 799999998876655443
No 349
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.41 E-value=0.1 Score=41.55 Aligned_cols=41 Identities=20% Similarity=0.327 Sum_probs=34.2
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS 123 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~ 123 (147)
++-|.| .|-+|..+|..|+..|++|++.+++++.+++..+.
T Consensus 7 ~V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~ 47 (286)
T PRK07819 7 RVGVVG-AGQMGAGIAEVCARAGVDVLVFETTEELATAGRNR 47 (286)
T ss_pred EEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHH
Confidence 455666 68999999999999999999999999987764444
No 350
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=95.33 E-value=0.071 Score=42.72 Aligned_cols=44 Identities=20% Similarity=0.480 Sum_probs=37.4
Q ss_pred EEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLRE 126 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~~~~~~~~~l~~ 126 (147)
.+.|.| +|++|..++..|+..| .+|++++++++..+..+.++..
T Consensus 2 kI~IIG-aG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~ 47 (306)
T cd05291 2 KVVIIG-AGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLED 47 (306)
T ss_pred EEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHH
Confidence 567778 5999999999999999 5899999999888877777654
No 351
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=95.29 E-value=0.069 Score=44.89 Aligned_cols=43 Identities=19% Similarity=0.230 Sum_probs=37.3
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA 120 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~ 120 (147)
.+.|++++|.| .|.||+.+++.+...|++|+++++++.+++.+
T Consensus 199 ~l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A 241 (413)
T cd00401 199 MIAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQA 241 (413)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHH
Confidence 46899999998 67899999999999999999999988765543
No 352
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.26 E-value=0.065 Score=40.58 Aligned_cols=37 Identities=24% Similarity=0.296 Sum_probs=33.1
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
+++||.++|.|| |.+|...++.|.+.|++|++++++.
T Consensus 7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 578999999985 8999999999999999999998653
No 353
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=95.20 E-value=0.15 Score=36.27 Aligned_cols=45 Identities=20% Similarity=0.423 Sum_probs=38.5
Q ss_pred EEEEeCCcChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLRE 126 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~G--a~V~i~~r~~~~~~~~~~~l~~ 126 (147)
++.|.|++|.+|..++..|...+ .+++++|++++.++..+.++..
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~ 48 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSH 48 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhh
Confidence 57899999999999999999988 4699999999887777666654
No 354
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=95.20 E-value=0.059 Score=43.69 Aligned_cols=39 Identities=26% Similarity=0.399 Sum_probs=31.9
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
|.+++|+||+||+|....+-....|+.++++..+.++.+
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~ 181 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE 181 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH
Confidence 789999999999999999999999977666655554443
No 355
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=95.19 E-value=0.079 Score=41.14 Aligned_cols=41 Identities=34% Similarity=0.481 Sum_probs=35.9
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
++++++|+|+++++|..+++.+...|++|++++++.++.+.
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~ 184 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDA 184 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 56789999999999999999999999999999888765443
No 356
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.19 E-value=0.042 Score=40.36 Aligned_cols=43 Identities=26% Similarity=0.438 Sum_probs=34.0
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
++.||.++|.|.+.-+|+.++..|.++|+.|.++....+.+++
T Consensus 33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~ 75 (160)
T PF02882_consen 33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE 75 (160)
T ss_dssp STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence 5899999999999999999999999999999998776544443
No 357
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=95.17 E-value=0.028 Score=37.84 Aligned_cols=37 Identities=27% Similarity=0.303 Sum_probs=31.4
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
+++||.++|.| +|.+|..-++.|.+.|++|.+++...
T Consensus 4 ~l~~~~vlVvG-gG~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 4 DLKGKRVLVVG-GGPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp --TT-EEEEEE-ESHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred EcCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCch
Confidence 57899999998 49999999999999999999998874
No 358
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=95.17 E-value=0.024 Score=45.57 Aligned_cols=64 Identities=20% Similarity=0.090 Sum_probs=45.2
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHHHHHHhCCeEEEEEcccCCCC
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA---VQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~---~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
+|+++|||-+|--|.-+++.|++.|+.|..+.|........ +-+..-.......++.+|++|..
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~ 68 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSS 68 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchH
Confidence 68999999999999999999999999999998864332211 11111112222567788888754
No 359
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=95.17 E-value=0.096 Score=41.89 Aligned_cols=39 Identities=31% Similarity=0.346 Sum_probs=33.6
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~ 121 (147)
.+.|.| .|-+|..++..|+++|++|++++++++..+...
T Consensus 4 ~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~ 42 (308)
T PRK06129 4 SVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAP 42 (308)
T ss_pred EEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHH
Confidence 577887 788999999999999999999999987766543
No 360
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.11 E-value=0.1 Score=41.27 Aligned_cols=40 Identities=23% Similarity=0.359 Sum_probs=34.5
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~ 122 (147)
.+.|.| .|-+|..+|..|++.|++|++++++++.+++..+
T Consensus 3 ~V~VIG-~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~ 42 (288)
T PRK09260 3 KLVVVG-AGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQ 42 (288)
T ss_pred EEEEEC-ccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHH
Confidence 567777 5899999999999999999999999988776544
No 361
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=95.10 E-value=0.087 Score=43.17 Aligned_cols=42 Identities=29% Similarity=0.379 Sum_probs=36.5
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA 120 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~ 120 (147)
-.|+.+.|+|.+ |+|...++.....|++|+.+++++++++.+
T Consensus 165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a 206 (339)
T COG1064 165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELA 206 (339)
T ss_pred CCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHH
Confidence 358899999977 999999888888999999999999887544
No 362
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=95.08 E-value=0.1 Score=39.63 Aligned_cols=35 Identities=20% Similarity=0.207 Sum_probs=33.5
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEe
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS 111 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~ 111 (147)
.+.||.++|.|.+.=+|+.++..|.++|+.|.+++
T Consensus 59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~ 93 (197)
T cd01079 59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVD 93 (197)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEe
Confidence 68999999999999999999999999999999985
No 363
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.05 E-value=0.1 Score=41.72 Aligned_cols=42 Identities=26% Similarity=0.431 Sum_probs=36.4
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
.+.||.++|.|.+.-+|+.++..|.++|+.|.++......+.
T Consensus 154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~ 195 (285)
T PRK14191 154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLS 195 (285)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHH
Confidence 688999999999999999999999999999998765444443
No 364
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.04 E-value=0.17 Score=42.83 Aligned_cols=38 Identities=21% Similarity=0.353 Sum_probs=32.6
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~ 115 (147)
.+.+|.++|.| .|++|.++|+.|.++|++|.+++++..
T Consensus 13 ~~~~~~v~viG-~G~~G~~~A~~L~~~G~~V~~~d~~~~ 50 (480)
T PRK01438 13 DWQGLRVVVAG-LGVSGFAAADALLELGARVTVVDDGDD 50 (480)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 45678899998 588999999999999999999986654
No 365
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=95.03 E-value=0.11 Score=41.14 Aligned_cols=41 Identities=24% Similarity=0.380 Sum_probs=34.2
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~ 122 (147)
+.+.|.| .|-+|..++..|+..|++|++++++++.+++..+
T Consensus 4 ~~I~ViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~ 44 (291)
T PRK06035 4 KVIGVVG-SGVMGQGIAQVFARTGYDVTIVDVSEEILKNAME 44 (291)
T ss_pred cEEEEEC-ccHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence 3566666 6889999999999999999999999988775443
No 366
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=95.03 E-value=0.099 Score=44.56 Aligned_cols=36 Identities=19% Similarity=0.383 Sum_probs=30.3
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCC---CEEEEEeCC
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAG---DNVIICSRS 113 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~G---a~V~i~~r~ 113 (147)
+.+|+++||||+|.+|+.+.+.|++.- -+++++-|.
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~ 48 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRA 48 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEec
Confidence 689999999999999999999998754 257777664
No 367
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=95.02 E-value=0.081 Score=41.86 Aligned_cols=33 Identities=42% Similarity=0.565 Sum_probs=30.0
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
+++|||++|-||.++.+.|.++|++|+.++|..
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~ 34 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRSD 34 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTTC
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCchh
Confidence 589999999999999999999999999987654
No 368
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=95.01 E-value=0.14 Score=43.78 Aligned_cols=41 Identities=17% Similarity=0.248 Sum_probs=35.3
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~ 117 (147)
..+.||+++|.|. |.||+.+++.+...|++|+++++++...
T Consensus 250 ~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a 290 (476)
T PTZ00075 250 VMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICA 290 (476)
T ss_pred CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence 3689999999995 4699999999999999999998876544
No 369
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=94.99 E-value=0.097 Score=43.62 Aligned_cols=59 Identities=29% Similarity=0.366 Sum_probs=44.1
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCC
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKG 142 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~ 142 (147)
...+.++|.|+ |.+|..+++.|.+.|++|++++++++..++..++ +.+ ..++..|.++.
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~~~-~~~i~gd~~~~ 287 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----LPN-TLVLHGDGTDQ 287 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----CCC-CeEEECCCCCH
Confidence 45678999986 9999999999999999999999998776554332 222 33556666654
No 370
>PRK04148 hypothetical protein; Provisional
Probab=94.98 E-value=0.14 Score=36.52 Aligned_cols=54 Identities=17% Similarity=0.130 Sum_probs=39.3
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCC
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAK 141 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~ 141 (147)
+++.+++.|.+ .|..++..|++.|++|+.+|.++...+.+.+. ...++..|+.+
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~-------~~~~v~dDlf~ 69 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL-------GLNAFVDDLFN 69 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh-------CCeEEECcCCC
Confidence 44678888865 77788999999999999999999865444221 13456666664
No 371
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=94.87 E-value=0.12 Score=40.10 Aligned_cols=40 Identities=28% Similarity=0.324 Sum_probs=35.3
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
.+++++|+|+++++|..+.+.+...|++|+++.++++..+
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA 178 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 5789999999999999999999999999999988776543
No 372
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=94.87 E-value=0.15 Score=48.24 Aligned_cols=36 Identities=25% Similarity=0.389 Sum_probs=31.9
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCC----CEEEEEeCChH
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAG----DNVIICSRSAE 115 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~G----a~V~i~~r~~~ 115 (147)
.++++|||++|.||..+++.|++++ ++|++..|+..
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~ 1010 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKS 1010 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCC
Confidence 4689999999999999999999887 78999888754
No 373
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=94.86 E-value=0.052 Score=35.05 Aligned_cols=32 Identities=31% Similarity=0.343 Sum_probs=22.0
Q ss_pred CEEEEeCCcChHHHHHHHHHH-HCCCEEEEEeC
Q 032110 81 YNVLITGSTKGIGYALAKEFL-KAGDNVIICSR 112 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La-~~Ga~V~i~~r 112 (147)
|.++|+|++.|.|++....++ ..|++.+-+..
T Consensus 40 K~VLViGaStGyGLAsRIa~aFg~gA~TiGV~f 72 (78)
T PF12242_consen 40 KKVLVIGASTGYGLASRIAAAFGAGADTIGVSF 72 (78)
T ss_dssp SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE-
T ss_pred ceEEEEecCCcccHHHHHHHHhcCCCCEEEEee
Confidence 789999999999999665555 66677665544
No 374
>PLN00203 glutamyl-tRNA reductase
Probab=94.78 E-value=0.1 Score=45.16 Aligned_cols=46 Identities=26% Similarity=0.428 Sum_probs=39.5
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQS 123 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~~~~~ 123 (147)
++.++.++|.|+ |++|..+++.|...|+ +|+++.|+.++.++..++
T Consensus 263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~ 309 (519)
T PLN00203 263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREE 309 (519)
T ss_pred CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH
Confidence 377899999986 9999999999999996 799999998887766544
No 375
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=94.78 E-value=0.12 Score=41.65 Aligned_cols=45 Identities=27% Similarity=0.425 Sum_probs=37.2
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQS 123 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~ 123 (147)
+.++.++|.|+ |.+|..+++.|...| .+|++++|+.++.++.+++
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~ 221 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKE 221 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Confidence 67888999985 999999999999877 5799999998876655444
No 376
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.74 E-value=0.15 Score=40.30 Aligned_cols=40 Identities=28% Similarity=0.305 Sum_probs=33.6
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~ 122 (147)
.+.|.| +|-+|..+|..|+..|++|++++++++.+++..+
T Consensus 5 kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~ 44 (287)
T PRK08293 5 NVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKE 44 (287)
T ss_pred EEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence 456666 6899999999999999999999999887766543
No 377
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.72 E-value=0.079 Score=44.38 Aligned_cols=37 Identities=19% Similarity=0.335 Sum_probs=32.5
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~ 115 (147)
+.+|+++|+|.+ |+|.++++.|+++|++|++.|....
T Consensus 3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~ 39 (445)
T PRK04308 3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELK 39 (445)
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 567899999964 9999999999999999999987654
No 378
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.69 E-value=0.18 Score=41.67 Aligned_cols=54 Identities=30% Similarity=0.318 Sum_probs=41.5
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC-------------------hHHHHHHHHHHHHHhCCeE
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-------------------AERVDSAVQSLREEFGEQH 132 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~-------------------~~~~~~~~~~l~~~~~~~~ 132 (147)
+.+++++|.| .||+|..+++.|+..|. ++.++|.+ ..+.+.+.+.+.+.++...
T Consensus 133 l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~ 206 (376)
T PRK08762 133 LLEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQ 206 (376)
T ss_pred HhcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCE
Confidence 5667777775 78999999999999996 79998886 3456666677777666543
No 379
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.66 E-value=0.092 Score=42.25 Aligned_cols=38 Identities=26% Similarity=0.399 Sum_probs=35.1
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEe-CCh
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSA 114 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~-r~~ 114 (147)
.+.||.++|.|.++-+|..++..|.++|+.|.++. |+.
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~ 193 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR 193 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence 68999999999999999999999999999999995 654
No 380
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=94.66 E-value=0.18 Score=41.25 Aligned_cols=36 Identities=36% Similarity=0.483 Sum_probs=31.1
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS 113 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~ 113 (147)
.+..+.++|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 21 ~L~~~~VlVvG-~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 21 KLREKHVLIIG-AGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred HhcCCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45667888888 59999999999999996 89999876
No 381
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=94.65 E-value=0.13 Score=41.23 Aligned_cols=41 Identities=17% Similarity=0.293 Sum_probs=34.1
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS 119 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~ 119 (147)
..+++++|.|+ |++|...++.+...|+ +|+++++++++++.
T Consensus 168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~ 209 (343)
T PRK09880 168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSL 209 (343)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHH
Confidence 35788999985 9999999998888998 58889988877653
No 382
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=94.63 E-value=0.13 Score=41.46 Aligned_cols=41 Identities=17% Similarity=0.270 Sum_probs=35.4
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
..|.+++|.|+ +++|...++.+...|++|+++++++++++.
T Consensus 165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~ 205 (349)
T TIGR03201 165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEM 205 (349)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 35789999998 999999999999999999999988876653
No 383
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=94.53 E-value=0.15 Score=36.85 Aligned_cols=37 Identities=24% Similarity=0.441 Sum_probs=30.9
Q ss_pred EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA 120 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~ 120 (147)
+.|-| +|..|.++|..|+.+|++|.++.|+++..++.
T Consensus 2 I~ViG-aG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i 38 (157)
T PF01210_consen 2 IAVIG-AGNWGTALAALLADNGHEVTLWGRDEEQIEEI 38 (157)
T ss_dssp EEEES-SSHHHHHHHHHHHHCTEEEEEETSCHHHHHHH
T ss_pred EEEEC-cCHHHHHHHHHHHHcCCEEEEEeccHHHHHHH
Confidence 45665 78899999999999999999999998655544
No 384
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.52 E-value=0.19 Score=40.79 Aligned_cols=40 Identities=15% Similarity=0.130 Sum_probs=32.9
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~ 122 (147)
++.|.| +|-||..+|..|+..|++|++.+++++..+...+
T Consensus 9 ~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~ 48 (321)
T PRK07066 9 TFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAEAALRA 48 (321)
T ss_pred EEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence 555665 7889999999999999999999999876655433
No 385
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=94.51 E-value=0.24 Score=39.24 Aligned_cols=39 Identities=18% Similarity=0.239 Sum_probs=32.9
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA 120 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~ 120 (147)
+.+-|.| .|-+|..++..|+..|++|++.+++++.+++.
T Consensus 5 ~~V~vIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 43 (295)
T PLN02545 5 KKVGVVG-AGQMGSGIAQLAAAAGMDVWLLDSDPAALSRG 43 (295)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHH
Confidence 3566666 78899999999999999999999999877643
No 386
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.50 E-value=0.12 Score=41.47 Aligned_cols=43 Identities=23% Similarity=0.401 Sum_probs=37.5
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
++.||.++|.|.+.-+|+.++..|..+|+.|.++.+....+++
T Consensus 156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~ 198 (285)
T PRK10792 156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRH 198 (285)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHH
Confidence 6889999999999999999999999999999998876544443
No 387
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=94.49 E-value=0.19 Score=40.65 Aligned_cols=48 Identities=17% Similarity=0.344 Sum_probs=40.3
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREE 127 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga--~V~i~~r~~~~~~~~~~~l~~~ 127 (147)
.++++.|.|+ |.+|..++..|+..|. +++++|++++.++..+.++...
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~ 54 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHA 54 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhh
Confidence 3568999997 9999999999999995 7999999998887777776643
No 388
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=94.48 E-value=0.19 Score=40.89 Aligned_cols=39 Identities=26% Similarity=0.289 Sum_probs=34.7
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~ 116 (147)
.+.|+++.|.| .|.||..+|+.|...|++|++++++.+.
T Consensus 143 ~l~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~ 181 (330)
T PRK12480 143 PVKNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNK 181 (330)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence 57889888887 7889999999999999999999998754
No 389
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=94.45 E-value=0.16 Score=39.90 Aligned_cols=40 Identities=30% Similarity=0.400 Sum_probs=34.9
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
+++++|.|+++++|..+++.....|++|+++++++++.+.
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~ 186 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADY 186 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHH
Confidence 5689999999999999999999999999998888766543
No 390
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.44 E-value=0.28 Score=40.73 Aligned_cols=61 Identities=30% Similarity=0.306 Sum_probs=41.6
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChH------HHHHHHH---HHHHHhCCeEEEEEcccCC
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAE------RVDSAVQ---SLREEFGEQHVVQNVMLAK 141 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~------~~~~~~~---~l~~~~~~~~~~~~~dv~~ 141 (147)
+.+++||++|.+|.-+..+|+.+- ++|++.-|-.+ ++++.+. .+.+.......++..|+..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e 71 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAE 71 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEeccccc
Confidence 468999999999988888887655 69999877543 2223222 2233455666777777763
No 391
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=94.41 E-value=0.35 Score=37.65 Aligned_cols=55 Identities=24% Similarity=0.282 Sum_probs=40.0
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHHHhCCeE
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA-------------------ERVDSAVQSLREEFGEQH 132 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~-------------------~~~~~~~~~l~~~~~~~~ 132 (147)
.+..+.++|.|. ||+|..+++.|+..|. ++.++|.+. .+.+.+.+.+.+.++...
T Consensus 29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~ 103 (245)
T PRK05690 29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIA 103 (245)
T ss_pred HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCE
Confidence 466778888885 9999999999999994 788876531 244455566666665543
No 392
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.40 E-value=0.16 Score=40.66 Aligned_cols=43 Identities=14% Similarity=0.339 Sum_probs=37.2
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
++.||.++|.|.+.-+|+.++..|.++|+.|.++......+++
T Consensus 155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~ 197 (284)
T PRK14190 155 DISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAE 197 (284)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHH
Confidence 6899999999999999999999999999999988665544443
No 393
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=94.35 E-value=0.17 Score=36.67 Aligned_cols=39 Identities=28% Similarity=0.481 Sum_probs=32.1
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~ 121 (147)
.+-+-| -|-+|..+++.|++.|++|.+++|+.++.++..
T Consensus 3 ~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~ 41 (163)
T PF03446_consen 3 KIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALA 41 (163)
T ss_dssp EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHH
T ss_pred EEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhH
Confidence 455555 689999999999999999999999998877664
No 394
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.30 E-value=0.21 Score=39.78 Aligned_cols=41 Identities=22% Similarity=0.331 Sum_probs=34.2
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS 123 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~ 123 (147)
.+.|.| .|-+|..++..|+..|++|++++++++.+++..+.
T Consensus 6 ~I~vIG-aG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~ 46 (311)
T PRK06130 6 NLAIIG-AGTMGSGIAALFARKGLQVVLIDVMEGALERARGV 46 (311)
T ss_pred EEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence 455565 68899999999999999999999999887766554
No 395
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=94.26 E-value=0.19 Score=40.35 Aligned_cols=39 Identities=23% Similarity=0.201 Sum_probs=33.4
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
.|.+++|.|+ +++|...++.+...|++|+++++++++.+
T Consensus 165 ~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~ 203 (329)
T TIGR02822 165 PGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARR 203 (329)
T ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHH
Confidence 5779999996 89999988888889999999999887754
No 396
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=94.25 E-value=0.19 Score=39.58 Aligned_cols=40 Identities=18% Similarity=0.268 Sum_probs=35.1
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
.+.+++|.|+++++|..+++.+...|++|++++++.++.+
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~ 184 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCR 184 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 5678999999999999999999999999999888776544
No 397
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=94.23 E-value=0.21 Score=43.03 Aligned_cols=40 Identities=25% Similarity=0.410 Sum_probs=34.0
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~ 122 (147)
.+-|.| .|-+|..+|..|+..|+.|++++++++.+++..+
T Consensus 7 kV~VIG-aG~MG~gIA~~la~aG~~V~l~d~~~e~l~~~~~ 46 (503)
T TIGR02279 7 TVAVIG-AGAMGAGIAQVAASAGHQVLLYDIRAEALARAIA 46 (503)
T ss_pred EEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence 466666 5899999999999999999999999998876543
No 398
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=94.22 E-value=0.14 Score=39.18 Aligned_cols=33 Identities=39% Similarity=0.436 Sum_probs=27.6
Q ss_pred EEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110 84 LITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116 (147)
Q Consensus 84 lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~ 116 (147)
+..+|+|-||.+++++|+..|++|++..|+.++
T Consensus 4 ~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~ 36 (211)
T COG2085 4 IAIIGTGNIGSALALRLAKAGHEVIIGSSRGPK 36 (211)
T ss_pred EEEeccChHHHHHHHHHHhCCCeEEEecCCChh
Confidence 445679999999999999999999998665543
No 399
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=94.19 E-value=0.12 Score=37.60 Aligned_cols=35 Identities=29% Similarity=0.288 Sum_probs=31.4
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR 112 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r 112 (147)
+++||.++|.| +|-+|...++.|.+.|++|.+++.
T Consensus 10 ~l~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp 44 (157)
T PRK06719 10 NLHNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVSP 44 (157)
T ss_pred EcCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcC
Confidence 68999999998 788999999999999999998853
No 400
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=94.15 E-value=0.19 Score=37.95 Aligned_cols=41 Identities=32% Similarity=0.446 Sum_probs=34.8
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
..+.+++|+|+++ +|.++++.+...|.+|++++++++..+.
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~ 173 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLEL 173 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 3577899999888 9999999999999999999988765443
No 401
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=94.14 E-value=0.21 Score=38.81 Aligned_cols=42 Identities=26% Similarity=0.340 Sum_probs=36.7
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA 120 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~ 120 (147)
.+..++|.|+++++|..+++.+...|++|+.+++++++.+.+
T Consensus 132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 173 (305)
T cd08270 132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGL 173 (305)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 478999999999999999999999999999999887665443
No 402
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=94.11 E-value=0.21 Score=32.31 Aligned_cols=35 Identities=29% Similarity=0.577 Sum_probs=31.1
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSR 112 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r 112 (147)
++.+|+++|.|. |++|..++..|.+. +.+|.+++|
T Consensus 20 ~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 20 SLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 467889999997 99999999999998 578999888
No 403
>PLN02928 oxidoreductase family protein
Probab=94.10 E-value=0.16 Score=41.56 Aligned_cols=38 Identities=32% Similarity=0.314 Sum_probs=34.3
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
..+.||++.|.| .|.||+++++.|...|++|+.++|..
T Consensus 155 ~~l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~ 192 (347)
T PLN02928 155 DTLFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSW 192 (347)
T ss_pred cCCCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCC
Confidence 358899999998 69999999999999999999999863
No 404
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=94.10 E-value=0.37 Score=39.59 Aligned_cols=38 Identities=26% Similarity=0.309 Sum_probs=29.3
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~ 115 (147)
-+|+.++|.||++|.|.+.++-....|+..+++.++.+
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e 193 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKE 193 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccc
Confidence 46779999999999999999988889944444444433
No 405
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=94.08 E-value=0.2 Score=42.10 Aligned_cols=40 Identities=20% Similarity=0.258 Sum_probs=35.7
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~ 117 (147)
.+.||+++|.| .|.||+.+++.+...|++|+++++++.+.
T Consensus 192 ~l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~ 231 (406)
T TIGR00936 192 LIAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRA 231 (406)
T ss_pred CCCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhH
Confidence 47899999998 78899999999999999999999887654
No 406
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.07 E-value=0.22 Score=40.52 Aligned_cols=39 Identities=23% Similarity=0.192 Sum_probs=34.9
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~ 115 (147)
..+.||++.|.| .|.||..+|+.|...|++|++++|...
T Consensus 146 ~~L~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~ 184 (333)
T PRK13243 146 YDVYGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRK 184 (333)
T ss_pred cCCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 358899999998 699999999999999999999998754
No 407
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.07 E-value=0.093 Score=42.62 Aligned_cols=33 Identities=24% Similarity=0.312 Sum_probs=28.9
Q ss_pred EEEEeCCcChHHHHHHHHHHHCC-------CEEEEEeCCh
Q 032110 82 NVLITGSTKGIGYALAKEFLKAG-------DNVIICSRSA 114 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~G-------a~V~i~~r~~ 114 (147)
.+.|||++|.+|..++..|+..+ .+|+++|+++
T Consensus 4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~ 43 (325)
T cd01336 4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPP 43 (325)
T ss_pred EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCC
Confidence 58999999999999999999855 4899999854
No 408
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.06 E-value=0.15 Score=40.88 Aligned_cols=42 Identities=24% Similarity=0.418 Sum_probs=36.0
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
++.||.++|.|.+.-+|+.++..|.++|+.|.++......+.
T Consensus 155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~ 196 (285)
T PRK14189 155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLA 196 (285)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHH
Confidence 689999999999999999999999999999998765543343
No 409
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=94.01 E-value=0.25 Score=42.58 Aligned_cols=41 Identities=22% Similarity=0.357 Sum_probs=34.4
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS 123 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~ 123 (147)
.+-|.| .|-+|..+|..|+..|+.|++.+++++.+++..+.
T Consensus 9 ~V~VIG-aG~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~~~ 49 (507)
T PRK08268 9 TVAVIG-AGAMGAGIAQVAAQAGHTVLLYDARAGAAAAARDG 49 (507)
T ss_pred EEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence 466666 58899999999999999999999999988775433
No 410
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=94.01 E-value=0.38 Score=37.41 Aligned_cols=55 Identities=27% Similarity=0.346 Sum_probs=39.9
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCCh-------------------HHHHHHHHHHHHHhCCeE
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQH 132 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~-------------------~~~~~~~~~l~~~~~~~~ 132 (147)
.+++++++|.| .||+|..+++.|+..| -+++++|.+. .+.+.+.+.+.+.++...
T Consensus 21 ~L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~ 95 (240)
T TIGR02355 21 ALKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIA 95 (240)
T ss_pred HHhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcE
Confidence 35666788887 8899999999999999 5688877642 234555666666666554
No 411
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=93.99 E-value=0.18 Score=41.60 Aligned_cols=35 Identities=26% Similarity=0.295 Sum_probs=31.9
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
.+.+.|.||.|.||..++..|.+.|+.|.+++++.
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 35789999999999999999999999999999864
No 412
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=93.97 E-value=0.22 Score=38.34 Aligned_cols=36 Identities=25% Similarity=0.524 Sum_probs=32.2
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCC---EEEEEeCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGD---NVIICSRS 113 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga---~V~i~~r~ 113 (147)
.+++++++|-| +||.|.++++.|.+.|. +|++++|+
T Consensus 22 ~l~~~rvlvlG-AGgAg~aiA~~L~~~G~~~~~i~ivdr~ 60 (226)
T cd05311 22 KIEEVKIVING-AGAAGIAIARLLLAAGAKPENIVVVDSK 60 (226)
T ss_pred CccCCEEEEEC-chHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence 47788999998 59999999999999996 59999998
No 413
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=93.95 E-value=0.14 Score=40.98 Aligned_cols=47 Identities=23% Similarity=0.151 Sum_probs=40.1
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS 123 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~ 123 (147)
+++..++-|.|++|.||.++++-|+.++....++.|+.+..++...+
T Consensus 164 dlsqatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~ 210 (351)
T COG5322 164 DLSQATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQRLT 210 (351)
T ss_pred CHHHCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhhhh
Confidence 46777899999999999999999999999999999988776654433
No 414
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.91 E-value=0.18 Score=40.49 Aligned_cols=43 Identities=19% Similarity=0.334 Sum_probs=37.0
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
..+.||.++|.|.+.-+|+.++..|..+|+.|.++......++
T Consensus 160 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~ 202 (287)
T PRK14176 160 VDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLK 202 (287)
T ss_pred CCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHH
Confidence 3689999999999999999999999999999999875544443
No 415
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=93.90 E-value=0.24 Score=38.28 Aligned_cols=41 Identities=29% Similarity=0.436 Sum_probs=35.4
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
..+..++|.|+++++|..++..+...|++|++++++.+..+
T Consensus 138 ~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (323)
T cd08241 138 QPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLA 178 (323)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHH
Confidence 35779999999999999999999999999999888765543
No 416
>PRK08223 hypothetical protein; Validated
Probab=93.90 E-value=0.39 Score=38.51 Aligned_cols=56 Identities=18% Similarity=0.230 Sum_probs=40.4
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCCh-------------------HHHHHHHHHHHHHhCCeEE
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHV 133 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~-------------------~~~~~~~~~l~~~~~~~~~ 133 (147)
.+.+..++|.| .||+|..+++.|+..| -++.++|.+. .+.+.+.+.+.+.++...+
T Consensus 24 kL~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V 99 (287)
T PRK08223 24 RLRNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEI 99 (287)
T ss_pred HHhcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEE
Confidence 35666788887 8899999999999999 5688887641 2445556666666665543
No 417
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=93.87 E-value=0.26 Score=38.52 Aligned_cols=40 Identities=25% Similarity=0.342 Sum_probs=35.3
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
.+..++|+|+++++|..+++.+...|++|+.++++.+..+
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~ 181 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTA 181 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4678999999999999999999999999999988776544
No 418
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.84 E-value=0.21 Score=42.36 Aligned_cols=41 Identities=20% Similarity=0.265 Sum_probs=34.4
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~ 117 (147)
..+.+|.++|-| .||.|.++++.|.+.|+.|.+.|++....
T Consensus 11 ~~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~ 51 (473)
T PRK00141 11 PQELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETAR 51 (473)
T ss_pred ccccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHH
Confidence 345677888888 88999999999999999999999876543
No 419
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.82 E-value=0.18 Score=40.32 Aligned_cols=43 Identities=21% Similarity=0.295 Sum_probs=36.2
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
.++.||.++|.|.+.-+|+.++..|.++|+.|.++......++
T Consensus 153 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~ 195 (281)
T PRK14183 153 IDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLK 195 (281)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHH
Confidence 3689999999999999999999999999999998754433333
No 420
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=93.81 E-value=0.25 Score=34.83 Aligned_cols=35 Identities=37% Similarity=0.631 Sum_probs=29.6
Q ss_pred EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
++|-| .|+||.-++..|.+.|++|.+++|.. ..+.
T Consensus 1 I~I~G-~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~ 35 (151)
T PF02558_consen 1 ILIIG-AGAIGSLYAARLAQAGHDVTLVSRSP-RLEA 35 (151)
T ss_dssp EEEES-TSHHHHHHHHHHHHTTCEEEEEESHH-HHHH
T ss_pred CEEEC-cCHHHHHHHHHHHHCCCceEEEEccc-cHHh
Confidence 35555 78899999999999999999999988 5554
No 421
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=93.79 E-value=0.21 Score=39.82 Aligned_cols=41 Identities=24% Similarity=0.238 Sum_probs=34.2
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCE-EEEEeCChHHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDS 119 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~-V~i~~r~~~~~~~ 119 (147)
..|.+++|+|+ |++|..+++.+...|++ |+++++++++.+.
T Consensus 162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~ 203 (339)
T cd08239 162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLEL 203 (339)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 34788999975 89999999999999998 9999888776543
No 422
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=93.78 E-value=0.14 Score=44.29 Aligned_cols=54 Identities=24% Similarity=0.286 Sum_probs=40.2
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCeEEEEEcccCCCC
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVVQNVMLAKGM 143 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~dv~~~~ 143 (147)
.++|.| .|.+|+.+++.|.++|.+|+++|.|+++.++..+ . + ..++..|.+|++
T Consensus 419 hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~----~-g--~~~i~GD~~~~~ 472 (558)
T PRK10669 419 HALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE----R-G--IRAVLGNAANEE 472 (558)
T ss_pred CEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----C-C--CeEEEcCCCCHH
Confidence 466666 7889999999999999999999999887654422 1 2 345666766643
No 423
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=93.72 E-value=0.26 Score=38.82 Aligned_cols=41 Identities=27% Similarity=0.234 Sum_probs=35.2
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
.++..++|.|+++++|.++++.....|++|+++.+++++.+
T Consensus 138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (329)
T cd08250 138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE 178 (329)
T ss_pred CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH
Confidence 35778999999999999999999999999999888776544
No 424
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=93.71 E-value=0.28 Score=38.36 Aligned_cols=39 Identities=31% Similarity=0.409 Sum_probs=34.0
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
+..++|.|+++++|..+++.....|++|+++++++++.+
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~ 185 (325)
T cd05280 147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQAD 185 (325)
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 458999999999999999988899999999988876544
No 425
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.71 E-value=0.16 Score=40.66 Aligned_cols=36 Identities=17% Similarity=0.287 Sum_probs=33.4
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR 112 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r 112 (147)
.+.||.++|.|.++-+|+.++..|.++|+.|.++..
T Consensus 155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s 190 (284)
T PRK14179 155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHS 190 (284)
T ss_pred CCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECC
Confidence 589999999999999999999999999999999843
No 426
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=93.68 E-value=0.27 Score=39.61 Aligned_cols=34 Identities=26% Similarity=0.311 Sum_probs=30.0
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS 113 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~ 113 (147)
.|+.++|.|+ |++|...++.+...|++|++++++
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~ 205 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR 205 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence 5778999985 999999999888999999999983
No 427
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.67 E-value=0.19 Score=40.23 Aligned_cols=43 Identities=14% Similarity=0.274 Sum_probs=37.3
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
.++.||.++|.|.+.-+|+.++..|.++|+.|.++......++
T Consensus 155 i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~ 197 (284)
T PRK14177 155 IDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLP 197 (284)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 3689999999999999999999999999999999875544444
No 428
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=93.67 E-value=0.27 Score=38.56 Aligned_cols=40 Identities=23% Similarity=0.174 Sum_probs=34.7
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
.|..++|.|+++++|.++++.....|++|+++..+.++.+
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~ 178 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVA 178 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHH
Confidence 5778999999999999999999999999988877766543
No 429
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=93.65 E-value=0.57 Score=35.70 Aligned_cols=35 Identities=26% Similarity=0.390 Sum_probs=30.0
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS 113 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~ 113 (147)
+..+.++|.| .||+|..+++.|+..|. ++.+.|.+
T Consensus 26 L~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 26 LKKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred HhCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 5667788887 79999999999999995 59888876
No 430
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=93.64 E-value=0.18 Score=40.69 Aligned_cols=39 Identities=21% Similarity=0.174 Sum_probs=34.3
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~ 115 (147)
..+.||++.|.| .|.||+++++.|...|++|+.+++..+
T Consensus 132 ~~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~ 170 (312)
T PRK15469 132 YHREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRK 170 (312)
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 457899999997 899999999999999999999987653
No 431
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=93.63 E-value=0.52 Score=37.43 Aligned_cols=36 Identities=14% Similarity=0.373 Sum_probs=30.1
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCC
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS 113 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~ 113 (147)
.+.+..++|.| .||+|..+++.|++.| .++.++|.+
T Consensus 27 kL~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 27 LFADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred HhcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 35666788886 8899999999999999 688888754
No 432
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=93.62 E-value=0.34 Score=37.36 Aligned_cols=36 Identities=25% Similarity=0.301 Sum_probs=31.3
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEE-EEeC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVI-ICSR 112 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~-i~~r 112 (147)
.++.++++.|.| .|.+|+.+++.|.+.|++|+ +.|.
T Consensus 27 ~~l~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D~ 63 (227)
T cd01076 27 IGLAGARVAIQG-FGNVGSHAARFLHEAGAKVVAVSDS 63 (227)
T ss_pred CCccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence 357788999987 79999999999999999988 6666
No 433
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.62 E-value=0.2 Score=40.15 Aligned_cols=42 Identities=19% Similarity=0.324 Sum_probs=36.4
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
++.||.++|.|.+.-+|+.++..|..+|+.|.++......++
T Consensus 152 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~ 193 (287)
T PRK14173 152 PLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLP 193 (287)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 689999999999999999999999999999998765544443
No 434
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=93.60 E-value=0.26 Score=38.46 Aligned_cols=39 Identities=26% Similarity=0.357 Sum_probs=32.2
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCE-EEEEeCChHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVD 118 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~-V~i~~r~~~~~~ 118 (147)
.+++++|.|+ +++|...++.+...|++ |+++++++++++
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~ 159 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRE 159 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 6778999975 89999999998899986 888887776654
No 435
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.58 E-value=0.21 Score=39.91 Aligned_cols=43 Identities=19% Similarity=0.383 Sum_probs=37.2
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
.+.||.++|.|.+.-+|+.++..|.++|+.|.++......+.+
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~ 197 (278)
T PRK14172 155 DIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKE 197 (278)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence 6899999999999999999999999999999998755444443
No 436
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=93.57 E-value=0.52 Score=38.72 Aligned_cols=57 Identities=19% Similarity=0.236 Sum_probs=42.9
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCCh-------------------HHHHHHHHHHHHHhCCeEEE
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVV 134 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~-------------------~~~~~~~~~l~~~~~~~~~~ 134 (147)
.+.+++++|.| .||+|..+++.|+..| .++.++|.+. .+.+.+.+.+.+.++...+.
T Consensus 25 ~L~~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~ 101 (355)
T PRK05597 25 SLFDAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVT 101 (355)
T ss_pred HHhCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEE
Confidence 46677888887 6999999999999999 4788887642 34566677777776665433
No 437
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=93.49 E-value=0.18 Score=39.35 Aligned_cols=44 Identities=16% Similarity=0.332 Sum_probs=36.8
Q ss_pred EEEeCCcChHHHHHHHHHHHCC----CEEEEEeCChHHHHHHHHHHHH
Q 032110 83 VLITGSTKGIGYALAKEFLKAG----DNVIICSRSAERVDSAVQSLRE 126 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~G----a~V~i~~r~~~~~~~~~~~l~~ 126 (147)
+.|.|++|.+|..++..|+..| .+|+++|+++++++....++..
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~ 48 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQD 48 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHH
Confidence 3688988899999999999998 7899999998887776666544
No 438
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=93.45 E-value=0.41 Score=30.26 Aligned_cols=32 Identities=31% Similarity=0.469 Sum_probs=27.4
Q ss_pred EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~ 115 (147)
++|-| +|-+|.++|..|++.|.+|.++.+++.
T Consensus 2 vvViG-gG~ig~E~A~~l~~~g~~vtli~~~~~ 33 (80)
T PF00070_consen 2 VVVIG-GGFIGIELAEALAELGKEVTLIERSDR 33 (80)
T ss_dssp EEEES-SSHHHHHHHHHHHHTTSEEEEEESSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHhCcEEEEEeccch
Confidence 45555 899999999999999999999988654
No 439
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=93.44 E-value=0.25 Score=41.20 Aligned_cols=38 Identities=24% Similarity=0.531 Sum_probs=33.0
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA 120 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~ 120 (147)
.++|.|+ |.+|..+++.|.++|+.|++++++++..++.
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~ 39 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRL 39 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHH
Confidence 4777885 9999999999999999999999998876544
No 440
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=93.42 E-value=0.34 Score=37.58 Aligned_cols=41 Identities=34% Similarity=0.415 Sum_probs=35.4
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
..+..++|.|+++++|.++++.....|++|+.+.+++++.+
T Consensus 141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 181 (320)
T cd08243 141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAA 181 (320)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 35779999999999999999999999999998888776543
No 441
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=93.38 E-value=0.16 Score=38.37 Aligned_cols=35 Identities=29% Similarity=0.422 Sum_probs=30.5
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS 113 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~ 113 (147)
+..+.++|.| .||+|..+++.|+..|. ++++.|.+
T Consensus 19 L~~~~V~IvG-~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 19 LEQATVAICG-LGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 5667788887 68999999999999997 69998876
No 442
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=93.36 E-value=0.33 Score=39.68 Aligned_cols=41 Identities=32% Similarity=0.403 Sum_probs=35.3
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
.+..++|.|+++++|.++++.+...|++++++++++++.+.
T Consensus 193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~ 233 (393)
T cd08246 193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEY 233 (393)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence 46799999999999999999999999998888887766543
No 443
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=93.33 E-value=0.32 Score=36.89 Aligned_cols=38 Identities=26% Similarity=0.351 Sum_probs=33.1
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~ 115 (147)
+++||.++|.| +|.+|..-++.|++.|++|++++.+..
T Consensus 6 ~l~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~ 43 (205)
T TIGR01470 6 NLEGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELE 43 (205)
T ss_pred EcCCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence 47899999998 788999999999999999999987543
No 444
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.31 E-value=0.24 Score=39.70 Aligned_cols=42 Identities=14% Similarity=0.271 Sum_probs=36.3
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
++.||.++|.|.+.-+|+.++..|.++|+.|.++......++
T Consensus 154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~ 195 (284)
T PRK14170 154 QIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLP 195 (284)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 689999999999999999999999999999998765444443
No 445
>PRK06487 glycerate dehydrogenase; Provisional
Probab=93.30 E-value=0.16 Score=41.10 Aligned_cols=37 Identities=22% Similarity=0.132 Sum_probs=33.5
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS 113 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~ 113 (147)
..+.||++.|.| .|.||+++++.+...|.+|+..++.
T Consensus 144 ~~l~gktvgIiG-~G~IG~~vA~~l~~fgm~V~~~~~~ 180 (317)
T PRK06487 144 VELEGKTLGLLG-HGELGGAVARLAEAFGMRVLIGQLP 180 (317)
T ss_pred cccCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCC
Confidence 358899999998 7999999999999999999998875
No 446
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.29 E-value=0.24 Score=39.90 Aligned_cols=43 Identities=21% Similarity=0.271 Sum_probs=36.6
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
.+.||.++|.|.+.-+|+.++..|.++|+.|.++......+++
T Consensus 155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~ 197 (297)
T PRK14186 155 DIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLAS 197 (297)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence 6899999999999999999999999999999888654444443
No 447
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.27 E-value=0.25 Score=39.49 Aligned_cols=42 Identities=19% Similarity=0.272 Sum_probs=36.0
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
.+.||.++|.|.+.-+|+.++..|..+|+.|.++......++
T Consensus 153 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~ 194 (282)
T PRK14169 153 DVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLK 194 (282)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHH
Confidence 589999999999999999999999999999988854443343
No 448
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=93.26 E-value=0.37 Score=37.03 Aligned_cols=41 Identities=27% Similarity=0.352 Sum_probs=35.5
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
.++..++|.|+++++|..+++.+...|++|+++++++++.+
T Consensus 135 ~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 175 (320)
T cd05286 135 KPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAE 175 (320)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 35789999999999999999999999999999888776544
No 449
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.25 E-value=0.46 Score=37.39 Aligned_cols=37 Identities=24% Similarity=0.371 Sum_probs=31.8
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
.+.|.| .|-+|..++..|+..|++|++++++++.+++
T Consensus 5 kI~VIG-~G~mG~~ia~~la~~g~~V~~~d~~~~~~~~ 41 (282)
T PRK05808 5 KIGVIG-AGTMGNGIAQVCAVAGYDVVMVDISDAAVDR 41 (282)
T ss_pred EEEEEc-cCHHHHHHHHHHHHCCCceEEEeCCHHHHHH
Confidence 455665 6999999999999999999999999987754
No 450
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.25 E-value=0.25 Score=39.48 Aligned_cols=42 Identities=17% Similarity=0.311 Sum_probs=36.6
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
.+.||.++|.|.+.-+|+.++..|.++|+.|.++......+.
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~ 196 (282)
T PRK14180 155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK 196 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHH
Confidence 688999999999999999999999999999999866544343
No 451
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=93.23 E-value=0.36 Score=37.82 Aligned_cols=40 Identities=38% Similarity=0.449 Sum_probs=34.6
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
.+..++|.|+++++|..+++.+...|++++++.+++++.+
T Consensus 140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 179 (334)
T PTZ00354 140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVD 179 (334)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 5678999999999999999999999999888887766544
No 452
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=93.22 E-value=0.64 Score=35.60 Aligned_cols=54 Identities=22% Similarity=0.313 Sum_probs=39.6
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC-------------------hHHHHHHHHHHHHHhCCe
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-------------------AERVDSAVQSLREEFGEQ 131 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~-------------------~~~~~~~~~~l~~~~~~~ 131 (147)
.+.+++++|.| .||+|.++++.|+..|. ++.++|.+ ..+.+.+.+.+.+.++..
T Consensus 18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~ 91 (228)
T cd00757 18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDV 91 (228)
T ss_pred HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCC
Confidence 35667888887 89999999999999995 68777643 234555666676666654
No 453
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=93.15 E-value=0.4 Score=36.70 Aligned_cols=37 Identities=30% Similarity=0.373 Sum_probs=32.8
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
+++||.++|.| +|..|..=++.|++.|++|++++...
T Consensus 9 ~l~~k~VlvvG-gG~va~rKa~~ll~~ga~v~Vvs~~~ 45 (210)
T COG1648 9 DLEGKKVLVVG-GGSVALRKARLLLKAGADVTVVSPEF 45 (210)
T ss_pred EcCCCEEEEEC-CCHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 57899999998 77889999999999999999987655
No 454
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=93.13 E-value=0.36 Score=39.26 Aligned_cols=40 Identities=18% Similarity=0.220 Sum_probs=33.2
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS 119 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~ 119 (147)
.|.+++|.| ++++|...++.+...|+ +|+++++++++++.
T Consensus 185 ~g~~VlV~G-~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~ 225 (368)
T TIGR02818 185 EGDTVAVFG-LGGIGLSVIQGARMAKASRIIAIDINPAKFEL 225 (368)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence 577899997 59999999998888998 79988888776543
No 455
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=93.13 E-value=0.72 Score=32.18 Aligned_cols=52 Identities=23% Similarity=0.415 Sum_probs=37.8
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC-------------------hHHHHHHHHHHHHHhCCeE
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-------------------AERVDSAVQSLREEFGEQH 132 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~-------------------~~~~~~~~~~l~~~~~~~~ 132 (147)
.++++|.| .||+|..+++.|+..|. ++.++|.+ ..+.+.+.+.+.+.++...
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~ 73 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVE 73 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSE
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCcee
Confidence 34677776 89999999999999996 68888753 1245556666777666554
No 456
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=93.12 E-value=0.36 Score=39.62 Aligned_cols=41 Identities=29% Similarity=0.383 Sum_probs=34.6
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
..+..++|.|+++++|..+++.+...|++++++.++.++.+
T Consensus 188 ~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~ 228 (398)
T TIGR01751 188 KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAE 228 (398)
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence 35679999999999999999999999999888887765543
No 457
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=93.12 E-value=0.41 Score=37.84 Aligned_cols=41 Identities=24% Similarity=0.322 Sum_probs=35.9
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
.+..++|.|+++.+|..+++.+...|++|++++++.++.+.
T Consensus 162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~ 202 (334)
T PRK13771 162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKI 202 (334)
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 46789999999999999999999999999998888766544
No 458
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=93.10 E-value=0.37 Score=38.15 Aligned_cols=40 Identities=28% Similarity=0.292 Sum_probs=32.3
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
+++++++|+++++|...++.....|++|+++++++++.+.
T Consensus 144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~ 183 (324)
T cd08291 144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDL 183 (324)
T ss_pred CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 3456666999999999998888899999998888766543
No 459
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=93.09 E-value=0.37 Score=40.54 Aligned_cols=48 Identities=27% Similarity=0.455 Sum_probs=41.7
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLR 125 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~~~~~~~~~~~l~ 125 (147)
++++|.++|.| .|-+|.-+++.|+++| .+|+++.|+.++.++++.++.
T Consensus 175 ~L~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~ 223 (414)
T COG0373 175 SLKDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG 223 (414)
T ss_pred ccccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence 38999999998 6779999999999999 679999999999887776653
No 460
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=93.02 E-value=0.29 Score=39.82 Aligned_cols=39 Identities=26% Similarity=0.289 Sum_probs=31.5
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
.|++++|.| .|++|..+++.+...|++|++++.+.++..
T Consensus 183 ~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~ 221 (360)
T PLN02586 183 PGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKED 221 (360)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhh
Confidence 577889966 599999999999899999888776655433
No 461
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=93.02 E-value=0.53 Score=36.48 Aligned_cols=35 Identities=20% Similarity=0.322 Sum_probs=29.0
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS 113 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~ 113 (147)
+.++.++|.| .||+|..+++.|++.|. +++++|.+
T Consensus 9 L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 9 LRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred HhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4566788886 88999999999999994 78888754
No 462
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.00 E-value=0.28 Score=39.50 Aligned_cols=43 Identities=14% Similarity=0.197 Sum_probs=37.1
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
.+.||.++|.|.+.-+|+.++..|.++|+.|.++......+++
T Consensus 157 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~ 199 (294)
T PRK14187 157 NLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLAD 199 (294)
T ss_pred CCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHH
Confidence 6899999999999999999999999999999988765444443
No 463
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.00 E-value=0.36 Score=38.54 Aligned_cols=44 Identities=20% Similarity=0.416 Sum_probs=38.8
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA 120 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~ 120 (147)
.+.||.++|.|.+.-.|+.++..|..+|+.|.++.++...+++.
T Consensus 149 ~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~ 192 (279)
T PRK14178 149 SIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAE 192 (279)
T ss_pred CCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHH
Confidence 68999999999999999999999999999999998876555443
No 464
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=92.98 E-value=0.28 Score=39.53 Aligned_cols=44 Identities=16% Similarity=0.241 Sum_probs=37.4
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
..+.||.++|.|.+.=+|+.++..|.++|+.|.++......+++
T Consensus 163 i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~ 206 (299)
T PLN02516 163 IPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPES 206 (299)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence 36899999999999999999999999999999998655444443
No 465
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=92.97 E-value=0.33 Score=40.19 Aligned_cols=42 Identities=19% Similarity=0.226 Sum_probs=34.0
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCC---EEEEEeCChHHHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGD---NVIICSRSAERVDSA 120 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga---~V~i~~r~~~~~~~~ 120 (147)
.|.+++|.|++|++|...++.+...|+ +|+++++++++++.+
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a 219 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA 219 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence 467899999999999998887766553 799999988876654
No 466
>PLN02740 Alcohol dehydrogenase-like
Probab=92.97 E-value=0.35 Score=39.53 Aligned_cols=41 Identities=22% Similarity=0.273 Sum_probs=34.0
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS 119 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~ 119 (147)
..|.+++|.|+ |++|...++.+...|+ +|+++++++++++.
T Consensus 197 ~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~ 238 (381)
T PLN02740 197 QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEK 238 (381)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHH
Confidence 35778999984 9999999999999998 69889888776553
No 467
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=92.96 E-value=0.39 Score=43.03 Aligned_cols=40 Identities=18% Similarity=0.192 Sum_probs=33.6
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~ 121 (147)
+.+.|.| +|-+|..+|..++..|++|++.|++++.+++..
T Consensus 314 ~~v~ViG-aG~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~ 353 (715)
T PRK11730 314 KQAAVLG-AGIMGGGIAYQSASKGVPVIMKDINQKALDLGM 353 (715)
T ss_pred ceEEEEC-CchhHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 3566665 789999999999999999999999998776543
No 468
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.90 E-value=0.29 Score=39.30 Aligned_cols=42 Identities=29% Similarity=0.426 Sum_probs=36.0
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
++.||.++|.|.+.-+|+.++..|.++|+.|.++......++
T Consensus 156 ~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~ 197 (288)
T PRK14171 156 NLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLS 197 (288)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 689999999999999999999999999999998764443343
No 469
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.87 E-value=0.31 Score=38.99 Aligned_cols=43 Identities=23% Similarity=0.410 Sum_probs=36.9
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
.+.||.++|.|.+.-+|+.++..|.++|+.|.++......+++
T Consensus 154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~ 196 (282)
T PRK14166 154 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSL 196 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence 5899999999999999999999999999999987665444443
No 470
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=92.87 E-value=0.36 Score=38.85 Aligned_cols=41 Identities=15% Similarity=0.240 Sum_probs=32.5
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHH-CC-CEEEEEeCChHHHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLK-AG-DNVIICSRSAERVDSA 120 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~-~G-a~V~i~~r~~~~~~~~ 120 (147)
.|.+++|+|+ |++|...++.+.. .| .+|+++++++++++.+
T Consensus 163 ~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a 205 (341)
T cd08237 163 DRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLF 205 (341)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHH
Confidence 4778999995 9999998887765 44 6799999988776543
No 471
>PRK14968 putative methyltransferase; Provisional
Probab=92.87 E-value=0.88 Score=32.90 Aligned_cols=60 Identities=22% Similarity=0.105 Sum_probs=38.6
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHhCCe--EEEEEcccCC
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ--HVVQNVMLAK 141 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~--~~~~~~dv~~ 141 (147)
.++.++-.|++.|. ++..++..+.+|+.++++++..+.+.+.+....-.. ..+++.|..+
T Consensus 23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~ 84 (188)
T PRK14968 23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFE 84 (188)
T ss_pred CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccc
Confidence 56678888877665 455555568999999999887776655554332221 3455555543
No 472
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=92.83 E-value=0.51 Score=35.70 Aligned_cols=42 Identities=29% Similarity=0.339 Sum_probs=35.6
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
..+..++|.|+++++|..+++.....|++|+.++++++..+.
T Consensus 103 ~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 144 (288)
T smart00829 103 RPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDF 144 (288)
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 356789999999999999999888999999999887765543
No 473
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=92.80 E-value=0.26 Score=36.79 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=25.3
Q ss_pred CcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 88 STKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 88 ~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
|.|-+|+.+|..|++.|++|+.+|.+++..++
T Consensus 7 GlGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~ 38 (185)
T PF03721_consen 7 GLGYVGLPLAAALAEKGHQVIGVDIDEEKVEA 38 (185)
T ss_dssp --STTHHHHHHHHHHTTSEEEEE-S-HHHHHH
T ss_pred CCCcchHHHHHHHHhCCCEEEEEeCChHHHHH
Confidence 58999999999999999999999999876543
No 474
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=92.78 E-value=0.43 Score=42.78 Aligned_cols=41 Identities=12% Similarity=0.218 Sum_probs=34.0
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS 123 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~ 123 (147)
.+.|.| +|-+|..+|..++..|+.|++.+++++.+++..+.
T Consensus 315 ~v~ViG-aG~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~ 355 (714)
T TIGR02437 315 QAAVLG-AGIMGGGIAYQSASKGTPIVMKDINQHSLDLGLTE 355 (714)
T ss_pred eEEEEC-CchHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence 456665 78999999999999999999999999887654433
No 475
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=92.77 E-value=0.42 Score=37.74 Aligned_cols=39 Identities=26% Similarity=0.336 Sum_probs=32.5
Q ss_pred CCEEEEeCCcChHHHHHHHHHHHC-CCEEEEEeCChHHHH
Q 032110 80 PYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVD 118 (147)
Q Consensus 80 ~k~~lVTG~s~GIG~~~a~~La~~-Ga~V~i~~r~~~~~~ 118 (147)
+..++|.|+++++|..+++..... |++|+.+.+++++.+
T Consensus 149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~ 188 (336)
T TIGR02817 149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQE 188 (336)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHH
Confidence 779999999999999988777666 999999887765543
No 476
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=92.75 E-value=0.32 Score=38.36 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=29.4
Q ss_pred CcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110 88 STKGIGYALAKEFLKAGDNVIICSRSAERVDSA 120 (147)
Q Consensus 88 ~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~ 120 (147)
|.|-+|..++..|++.|++|++++|++++.++.
T Consensus 6 G~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~ 38 (291)
T TIGR01505 6 GLGIMGSPMSINLAKAGYQLHVTTIGPEVADEL 38 (291)
T ss_pred EecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH
Confidence 479999999999999999999999998776654
No 477
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=92.74 E-value=0.47 Score=37.77 Aligned_cols=40 Identities=25% Similarity=0.333 Sum_probs=34.5
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
.+.+++|.| ++++|..+++.+...|++|+++++++++.+.
T Consensus 163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~ 202 (333)
T cd08296 163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADL 202 (333)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHH
Confidence 577899999 8999999999999999999999988766543
No 478
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=92.74 E-value=0.49 Score=40.54 Aligned_cols=38 Identities=26% Similarity=0.204 Sum_probs=32.1
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA 120 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~ 120 (147)
|+.+| |.|-||.++|..|+..|++|++++++++..++.
T Consensus 6 kIavI--G~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~ 43 (495)
T PRK07531 6 KAACI--GGGVIGGGWAARFLLAGIDVAVFDPHPEAERII 43 (495)
T ss_pred EEEEE--CcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 34444 589999999999999999999999998877654
No 479
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.69 E-value=0.34 Score=38.77 Aligned_cols=42 Identities=17% Similarity=0.206 Sum_probs=36.6
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
.+.||.++|.|.+.-+|+.++..|.++|+.|.++......++
T Consensus 154 ~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~ 195 (282)
T PRK14182 154 DPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLA 195 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 589999999999999999999999999999998865544444
No 480
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=92.68 E-value=0.48 Score=38.43 Aligned_cols=40 Identities=20% Similarity=0.312 Sum_probs=33.7
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS 119 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~~ 119 (147)
.|.+++|.| ++++|...++.+...|+ +|+++++++++.+.
T Consensus 186 ~g~~VlV~G-~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~ 226 (368)
T cd08300 186 PGSTVAVFG-LGAVGLAVIQGAKAAGASRIIGIDINPDKFEL 226 (368)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH
Confidence 577899997 59999999999999999 69889888776553
No 481
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=92.67 E-value=0.78 Score=37.97 Aligned_cols=54 Identities=22% Similarity=0.374 Sum_probs=40.2
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCC-CEEEEEeCC-------------------hHHHHHHHHHHHHHhCCe
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-------------------AERVDSAVQSLREEFGEQ 131 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~G-a~V~i~~r~-------------------~~~~~~~~~~l~~~~~~~ 131 (147)
.+.++.++|.| .||+|..+++.|+..| .++.++|.+ ..+.+.+.+.+.+.++..
T Consensus 38 ~l~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v 111 (370)
T PRK05600 38 RLHNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDI 111 (370)
T ss_pred HhcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCC
Confidence 35667788887 7899999999999999 479988865 224555566666666554
No 482
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=92.61 E-value=0.45 Score=37.16 Aligned_cols=40 Identities=23% Similarity=0.185 Sum_probs=34.6
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHH
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~ 117 (147)
..+.+++|.|+++++|.++++.+...|++|+++.+++++.
T Consensus 137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~ 176 (323)
T cd05282 137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQV 176 (323)
T ss_pred CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHH
Confidence 3567899999999999999999999999999888776553
No 483
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=92.60 E-value=0.85 Score=34.31 Aligned_cols=54 Identities=24% Similarity=0.415 Sum_probs=38.5
Q ss_pred CCCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC-------------------hHHHHHHHHHHHHHhCCeE
Q 032110 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-------------------AERVDSAVQSLREEFGEQH 132 (147)
Q Consensus 78 ~~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~-------------------~~~~~~~~~~l~~~~~~~~ 132 (147)
+.+++++|.| .+|+|.++++.|+..|. ++.++|.+ ..+.+.+.+.+.+.++...
T Consensus 19 L~~s~VlIiG-~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~ 92 (197)
T cd01492 19 LRSARILLIG-LKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVK 92 (197)
T ss_pred HHhCcEEEEc-CCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCE
Confidence 4556777776 77799999999999995 68888753 1234455666776666553
No 484
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=92.55 E-value=0.62 Score=38.14 Aligned_cols=38 Identities=24% Similarity=0.334 Sum_probs=33.4
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
..+++|++-|.| -|.||.++|+.|...|.+|++.++..
T Consensus 12 ~~LkgKtVGIIG-~GsIG~amA~nL~d~G~~ViV~~r~~ 49 (335)
T PRK13403 12 ELLQGKTVAVIG-YGSQGHAQAQNLRDSGVEVVVGVRPG 49 (335)
T ss_pred hhhCcCEEEEEe-EcHHHHHHHHHHHHCcCEEEEEECcc
Confidence 457899999997 79999999999999999999987653
No 485
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=92.54 E-value=0.42 Score=39.20 Aligned_cols=37 Identities=27% Similarity=0.254 Sum_probs=31.2
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~ 116 (147)
.|.+++|.|+ +++|...++.....|++|++++.+.++
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~ 214 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEK 214 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHH
Confidence 5778999875 899999999999999999888876544
No 486
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=92.52 E-value=0.42 Score=37.55 Aligned_cols=38 Identities=24% Similarity=0.458 Sum_probs=31.6
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA 120 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~ 120 (147)
.+.|-| +|.+|..++..|++.|++|.+++|+.+..+..
T Consensus 2 ~I~IiG-~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~ 39 (304)
T PRK06522 2 KIAILG-AGAIGGLFGAALAQAGHDVTLVARRGAHLDAL 39 (304)
T ss_pred EEEEEC-CCHHHHHHHHHHHhCCCeEEEEECChHHHHHH
Confidence 367777 58999999999999999999999987665543
No 487
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=92.45 E-value=0.56 Score=36.76 Aligned_cols=40 Identities=25% Similarity=0.380 Sum_probs=34.5
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
.+.+++|.|+++++|..+++.....|++|+++..++++.+
T Consensus 146 ~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~ 185 (324)
T cd08288 146 GDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEAD 185 (324)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 4578999999999999999999999999988887776544
No 488
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional
Probab=92.38 E-value=0.56 Score=39.95 Aligned_cols=37 Identities=16% Similarity=0.356 Sum_probs=32.6
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEE-EEeCC
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVI-ICSRS 113 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~-i~~r~ 113 (147)
.+++||+++|.| .|..|...++.|.+.|++|+ +.|.+
T Consensus 233 ~~l~Gk~VaVqG-~GnVg~~aa~~L~e~GakVVavSD~~ 270 (454)
T PTZ00079 233 DSLEGKTVVVSG-SGNVAQYAVEKLLQLGAKVLTMSDSD 270 (454)
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 458999999998 69999999999999999988 66665
No 489
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=92.35 E-value=1 Score=33.21 Aligned_cols=31 Identities=26% Similarity=0.396 Sum_probs=26.3
Q ss_pred EEEeCCcChHHHHHHHHHHHCCC-EEEEEeCCh
Q 032110 83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRSA 114 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~ 114 (147)
++|.| .||+|..+++.|+..|. ++.+.|.+.
T Consensus 2 VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 2 VGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred EEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 56666 79999999999999996 599988764
No 490
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=92.24 E-value=0.52 Score=38.28 Aligned_cols=39 Identities=21% Similarity=0.404 Sum_probs=32.5
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD 118 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~ 118 (147)
.+.+++|.| ++++|...++.+...|+ +|+++++++++++
T Consensus 191 ~g~~VlV~G-~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~ 230 (371)
T cd08281 191 PGQSVAVVG-LGGVGLSALLGAVAAGASQVVAVDLNEDKLA 230 (371)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHH
Confidence 577899988 58999999998888998 6888888877654
No 491
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.24 E-value=0.49 Score=37.94 Aligned_cols=44 Identities=16% Similarity=0.241 Sum_probs=37.7
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHH----CCCEEEEEeCChHHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLK----AGDNVIICSRSAERVDSA 120 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~----~Ga~V~i~~r~~~~~~~~ 120 (147)
.+.||.++|.|.+.-+|+.++..|.+ +|+.|.++......+++.
T Consensus 154 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~ 201 (286)
T PRK14184 154 SPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEE 201 (286)
T ss_pred CCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHH
Confidence 68999999999999999999999999 899999987665544443
No 492
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=92.17 E-value=0.36 Score=39.91 Aligned_cols=43 Identities=12% Similarity=0.181 Sum_probs=37.1
Q ss_pred CCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 032110 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (147)
Q Consensus 77 ~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~ 119 (147)
.+.||.++|.|.+.=+|+.++..|.++|+.|.++......+++
T Consensus 228 ~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~ 270 (364)
T PLN02616 228 EIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEE 270 (364)
T ss_pred CCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHH
Confidence 6899999999999999999999999999999998655444443
No 493
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=92.13 E-value=0.54 Score=42.35 Aligned_cols=43 Identities=14% Similarity=0.242 Sum_probs=35.2
Q ss_pred CEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 032110 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124 (147)
Q Consensus 81 k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~~~l 124 (147)
+.+-|.| +|-+|..+|..++..|++|++.|++++.+++..+.+
T Consensus 336 ~~v~ViG-aG~MG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~i 378 (737)
T TIGR02441 336 KTLAVLG-AGLMGAGIAQVSVDKGLKTVLKDATPAGLDRGQQQV 378 (737)
T ss_pred cEEEEEC-CCHhHHHHHHHHHhCCCcEEEecCCHHHHHHHHHHH
Confidence 3566666 589999999999999999999999998877654433
No 494
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=92.07 E-value=0.55 Score=37.56 Aligned_cols=31 Identities=29% Similarity=0.447 Sum_probs=27.7
Q ss_pred EEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
++|||++|-+|.++++.|. .+.+|+.+++..
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~ 33 (281)
T COG1091 3 ILITGANGQLGTELRRALP-GEFEVIATDRAE 33 (281)
T ss_pred EEEEcCCChHHHHHHHHhC-CCceEEeccCcc
Confidence 8999999999999999999 668899887755
No 495
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=92.06 E-value=1.5 Score=30.78 Aligned_cols=30 Identities=23% Similarity=0.485 Sum_probs=25.3
Q ss_pred EEEeCCcChHHHHHHHHHHHCCC-EEEEEeCC
Q 032110 83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRS 113 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~ 113 (147)
++|.| .||+|.++++.|+..|. ++.++|.+
T Consensus 2 VliiG-~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 2 VLLVG-LGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred EEEEC-CCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 56777 59999999999999996 68888754
No 496
>PRK07574 formate dehydrogenase; Provisional
Probab=91.99 E-value=0.49 Score=39.43 Aligned_cols=38 Identities=21% Similarity=0.166 Sum_probs=34.0
Q ss_pred CCCCCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 76 ~~~~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
..+.||++.|.| .|.||+.+++.|...|++|+..+|..
T Consensus 188 ~~L~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~ 225 (385)
T PRK07574 188 YDLEGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHR 225 (385)
T ss_pred eecCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCC
Confidence 458899999998 68899999999999999999999875
No 497
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=91.90 E-value=0.3 Score=37.02 Aligned_cols=37 Identities=30% Similarity=0.445 Sum_probs=33.7
Q ss_pred EEEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHH
Q 032110 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (147)
Q Consensus 82 ~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~ 118 (147)
++-|.|++|-.|..+.++...+|+.|+.+.|++++..
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~ 38 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLA 38 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcc
Confidence 4678899999999999999999999999999998764
No 498
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=91.88 E-value=0.71 Score=36.58 Aligned_cols=36 Identities=22% Similarity=0.224 Sum_probs=32.2
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCCEEEEEeCCh
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~ 114 (147)
.++.++|.|+++++|..+++.+...|++|+++.++.
T Consensus 146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~ 181 (341)
T cd08290 146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDR 181 (341)
T ss_pred CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 578999999999999999999999999988887665
No 499
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=91.83 E-value=0.79 Score=36.83 Aligned_cols=38 Identities=24% Similarity=0.173 Sum_probs=31.6
Q ss_pred EEEeCCcChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 032110 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121 (147)
Q Consensus 83 ~lVTG~s~GIG~~~a~~La~~Ga~V~i~~r~~~~~~~~~ 121 (147)
+.|- |.|.+|..++..|++.|++|.+++|+++..+...
T Consensus 7 I~iI-G~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~ 44 (328)
T PRK14618 7 VAVL-GAGAWGTALAVLAASKGVPVRLWARRPEFAAALA 44 (328)
T ss_pred EEEE-CcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 4555 4899999999999999999999999887665543
No 500
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=91.81 E-value=0.67 Score=37.51 Aligned_cols=39 Identities=21% Similarity=0.243 Sum_probs=32.7
Q ss_pred CCCEEEEeCCcChHHHHHHHHHHHCCC-EEEEEeCChHHHH
Q 032110 79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD 118 (147)
Q Consensus 79 ~~k~~lVTG~s~GIG~~~a~~La~~Ga-~V~i~~r~~~~~~ 118 (147)
.|.+++|.|+ +++|...++.+...|+ +|+++++++++.+
T Consensus 187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~ 226 (369)
T cd08301 187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFE 226 (369)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 5778999974 8999999998889998 7999988876654
Done!