Query 032111
Match_columns 147
No_of_seqs 117 out of 1646
Neff 9.6
Searched_HMMs 13730
Date Mon Mar 25 15:41:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032111.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032111hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.9 1.1E-22 8E-27 132.4 13.5 86 31-116 40-125 (139)
2 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.9 2.3E-22 1.7E-26 122.3 13.3 85 30-114 4-88 (93)
3 d1b7fa1 d.58.7.1 (A:123-204) S 99.9 9.5E-23 6.9E-27 121.3 10.8 80 33-112 2-81 (82)
4 d1whwa_ d.58.7.1 (A:) Probable 99.9 1.5E-22 1.1E-26 124.5 12.0 85 31-115 6-90 (99)
5 d2cqba1 d.58.7.1 (A:1-89) Pept 99.9 5.5E-23 4E-27 124.2 9.8 86 30-115 2-87 (89)
6 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.9 2E-22 1.5E-26 121.4 11.6 83 31-113 5-87 (88)
7 d1fxla1 d.58.7.1 (A:37-118) Hu 99.9 2.7E-22 2E-26 119.2 12.0 80 33-112 2-81 (82)
8 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.9 1.7E-22 1.2E-26 122.2 10.5 86 30-115 2-87 (90)
9 d2cq0a1 d.58.7.1 (A:231-320) E 99.9 2.8E-22 2.1E-26 121.2 10.9 84 31-114 6-89 (90)
10 d2cpza1 d.58.7.1 (A:383-484) C 99.9 4.4E-22 3.2E-26 123.0 11.9 85 31-115 16-100 (102)
11 d1cvja1 d.58.7.1 (A:11-90) Pol 99.9 5.6E-22 4.1E-26 117.4 10.7 77 35-111 2-78 (80)
12 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.9 3.6E-22 2.6E-26 121.4 10.1 82 33-114 9-90 (93)
13 d2cqca1 d.58.7.1 (A:109-191) A 99.9 1.4E-21 1E-25 116.4 10.7 77 31-107 7-83 (83)
14 d2cqga1 d.58.7.1 (A:96-185) TA 99.9 2.4E-21 1.7E-25 117.0 11.7 84 30-115 5-88 (90)
15 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.9 8E-22 5.8E-26 117.5 9.4 81 36-116 1-82 (83)
16 d1b7fa2 d.58.7.1 (A:205-289) S 99.9 2.2E-21 1.6E-25 116.0 11.2 79 32-110 5-85 (85)
17 d2u2fa_ d.58.7.1 (A:) Splicing 99.9 8.6E-22 6.3E-26 117.8 9.3 80 34-113 2-81 (85)
18 d2ghpa1 d.58.7.1 (A:116-196) U 99.9 1.3E-21 9.1E-26 116.1 9.3 79 34-112 2-80 (81)
19 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.9 3.8E-21 2.8E-25 114.7 11.3 80 32-112 5-84 (84)
20 d1no8a_ d.58.7.1 (A:) Nuclear 99.9 2.9E-21 2.1E-25 113.7 10.4 77 35-112 2-78 (78)
21 d1x4ba1 d.58.7.1 (A:8-110) Het 99.9 2.8E-21 2E-25 119.5 10.5 82 34-116 21-102 (103)
22 d1fxla2 d.58.7.1 (A:119-203) H 99.9 3.4E-21 2.4E-25 115.2 10.5 78 33-110 6-85 (85)
23 d2cqda1 d.58.7.1 (A:1-103) RNA 99.9 6.2E-21 4.5E-25 118.0 12.0 81 32-113 9-89 (103)
24 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.9 8.5E-21 6.2E-25 114.6 12.0 82 32-115 7-88 (90)
25 d2cpha1 d.58.7.1 (A:454-547) P 99.9 4.1E-21 3E-25 116.9 10.4 83 32-114 7-91 (94)
26 d1p1ta_ d.58.7.1 (A:) Cleavage 99.8 3E-21 2.2E-25 119.6 9.7 81 34-114 9-89 (104)
27 d2cpfa1 d.58.7.1 (A:362-446) P 99.8 8.6E-21 6.3E-25 113.4 10.7 78 36-113 1-81 (85)
28 d2cpea1 d.58.7.1 (A:353-453) R 99.8 7.5E-21 5.4E-25 117.1 10.7 87 31-117 6-100 (101)
29 d2cq3a1 d.58.7.1 (A:110-202) R 99.8 2.5E-20 1.8E-24 113.2 12.3 82 31-114 9-90 (93)
30 d1uawa_ d.58.7.1 (A:) Musashi- 99.8 1.8E-21 1.3E-25 114.3 6.9 76 34-110 1-76 (77)
31 d1cvja2 d.58.7.1 (A:91-179) Po 99.8 6.6E-21 4.8E-25 114.9 9.0 80 34-115 9-88 (89)
32 d1l3ka2 d.58.7.1 (A:103-181) N 99.8 3E-20 2.2E-24 109.5 11.6 77 33-110 2-78 (79)
33 d1hd0a_ d.58.7.1 (A:) Heteroge 99.8 6.4E-21 4.6E-25 111.4 8.3 75 35-110 1-75 (75)
34 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.8 2.2E-20 1.6E-24 114.3 10.7 85 31-115 6-96 (98)
35 d2cq4a1 d.58.7.1 (A:132-232) R 99.8 1.3E-20 9.4E-25 116.1 9.0 78 34-112 19-96 (101)
36 d2ghpa3 d.58.7.1 (A:206-291) U 99.8 1.2E-20 8.9E-25 113.0 8.6 82 32-114 3-86 (86)
37 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.8 6.4E-20 4.7E-24 111.7 11.6 80 31-113 12-91 (95)
38 d2cpxa1 d.58.7.1 (A:291-392) R 99.8 4.3E-21 3.1E-25 118.5 5.7 86 31-116 16-101 (102)
39 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.8 1E-19 7.5E-24 111.0 11.9 80 29-114 14-93 (96)
40 d1x0fa1 d.58.7.1 (A:183-257) N 99.8 9.5E-21 6.9E-25 110.6 6.4 75 35-110 1-75 (75)
41 d2msta_ d.58.7.1 (A:) Neural R 99.8 2.3E-20 1.7E-24 108.9 7.9 75 35-110 1-75 (75)
42 d2f9da1 d.58.7.1 (A:12-125) Pr 99.8 1E-19 7.6E-24 114.3 11.3 81 29-112 3-83 (114)
43 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.8 9.9E-20 7.2E-24 112.6 10.5 83 32-116 14-97 (104)
44 d2cqpa1 d.58.7.1 (A:917-1002) 99.8 9.8E-20 7.1E-24 108.9 8.7 79 32-110 8-86 (86)
45 d1wg5a_ d.58.7.1 (A:) Heteroge 99.8 3.2E-19 2.4E-23 110.3 11.0 84 32-116 14-97 (104)
46 d1zh5a2 d.58.7.1 (A:105-189) L 99.8 4E-19 2.9E-23 106.0 10.9 78 33-112 6-83 (85)
47 d1weza_ d.58.7.1 (A:) Heteroge 99.8 1.9E-19 1.4E-23 111.0 9.7 84 30-116 12-95 (102)
48 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.8 1.2E-20 9.1E-25 114.1 4.1 82 30-113 10-91 (91)
49 d3begb1 d.58.7.1 (B:121-207) S 99.8 3.5E-20 2.5E-24 111.2 5.8 74 34-114 1-74 (87)
50 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.8 9.2E-20 6.7E-24 112.2 7.6 81 31-112 16-96 (101)
51 d1wf2a_ d.58.7.1 (A:) Heteroge 99.8 4.2E-19 3E-23 108.6 10.1 75 31-113 13-88 (98)
52 d2cpia1 d.58.7.1 (A:101-189) E 99.8 2E-19 1.4E-23 108.3 7.9 77 32-108 7-89 (89)
53 d1fjca_ d.58.7.1 (A:) Nucleoli 99.8 3.6E-19 2.7E-23 108.5 9.0 80 31-115 14-93 (96)
54 d2cpda1 d.58.7.1 (A:223-308) A 99.8 1.5E-18 1.1E-22 103.7 11.5 78 31-114 6-83 (86)
55 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.8 2.9E-19 2.1E-23 105.5 8.0 77 34-116 2-79 (80)
56 d1wg4a_ d.58.7.1 (A:) Splicing 99.8 5.1E-19 3.7E-23 108.2 9.4 79 31-116 13-91 (98)
57 d2cpja1 d.58.7.1 (A:65-150) No 99.8 6.2E-19 4.5E-23 105.4 9.5 77 32-114 7-83 (86)
58 d2adca2 d.58.7.1 (A:444-531) P 99.8 1.5E-18 1.1E-22 104.1 10.7 79 31-113 8-87 (88)
59 d1wg1a_ d.58.7.1 (A:) Probable 99.8 1.6E-18 1.2E-22 104.0 10.6 76 32-114 4-79 (88)
60 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.8 1E-19 7.6E-24 105.3 5.1 71 36-106 1-71 (72)
61 d2disa1 d.58.7.1 (A:8-103) Hyp 99.8 6.5E-19 4.7E-23 107.4 8.7 83 34-116 2-88 (96)
62 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.8 1.2E-18 8.5E-23 102.6 9.6 77 30-114 2-78 (79)
63 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.8 1.4E-18 1E-22 103.1 9.7 76 31-111 6-82 (83)
64 d2ghpa2 d.58.7.1 (A:41-115) U4 99.8 2E-18 1.5E-22 100.5 10.0 74 34-110 1-74 (75)
65 d1whxa_ d.58.7.1 (A:) Probable 99.8 1.7E-18 1.2E-22 108.0 9.7 76 32-113 9-84 (111)
66 d2cpya1 d.58.7.1 (A:536-638) R 99.8 8.8E-19 6.4E-23 108.1 8.0 82 30-112 5-86 (103)
67 d1nu4a_ d.58.7.1 (A:) Spliceso 99.8 1.7E-18 1.3E-22 104.5 9.0 80 32-114 2-85 (91)
68 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.8 1.3E-18 9.7E-23 104.4 7.6 77 32-115 4-80 (88)
69 d2adca1 d.58.7.1 (A:335-443) P 99.8 2.6E-18 1.9E-22 106.9 9.2 75 34-113 3-78 (109)
70 d1whya_ d.58.7.1 (A:) Putative 99.8 5.9E-18 4.3E-22 103.3 10.6 77 32-114 16-94 (97)
71 d1wela1 d.58.7.1 (A:412-523) R 99.7 1.1E-18 7.9E-23 109.3 5.9 83 29-112 14-96 (112)
72 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.7 1.4E-17 1E-21 96.9 9.9 71 36-113 1-71 (75)
73 d2adba1 d.58.7.1 (A:177-284) P 99.7 8.2E-18 6E-22 104.5 8.8 80 31-114 5-86 (108)
74 d2cq1a1 d.58.7.1 (A:51-138) Po 99.7 3.1E-17 2.3E-21 98.2 10.8 79 30-114 5-85 (88)
75 d1wexa_ d.58.7.1 (A:) Heteroge 99.7 6.2E-17 4.5E-21 99.8 12.4 80 30-115 12-93 (104)
76 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.7 5.1E-17 3.7E-21 99.4 7.9 78 30-113 15-95 (99)
77 d1u1qa_ d.58.7.1 (A:) Nuclear 99.7 2.8E-16 2E-20 105.6 11.9 85 29-114 93-177 (183)
78 d1x4da1 d.58.7.1 (A:8-96) Matr 99.7 2E-16 1.4E-20 94.9 9.2 77 31-113 6-85 (89)
79 d1u2fa_ d.58.7.1 (A:) Splicing 99.7 9.2E-19 6.7E-23 105.5 -1.4 79 34-113 2-85 (90)
80 d1weya_ d.58.7.1 (A:) Calcipre 99.6 8.6E-16 6.3E-20 94.5 9.6 78 32-115 4-86 (104)
81 d1jmta_ d.58.7.3 (A:) d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.89 E-value=1.1e-22 Score=132.37 Aligned_cols=86 Identities=28% Similarity=0.555 Sum_probs=80.3
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 31 QSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 31 ~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
...++|||+|||+++++++|+++|++||.|..+.++.++.+++++|||||+|.+.++|++||+.||+..|.|+.|+|.++
T Consensus 40 ~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a 119 (139)
T d1u6fa1 40 DVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALA 119 (139)
T ss_dssp TTTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEES
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 34468999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCC
Q 032111 111 NDRPPR 116 (147)
Q Consensus 111 ~~~~~~ 116 (147)
.....+
T Consensus 120 ~~~~~~ 125 (139)
T d1u6fa1 120 ASGHQR 125 (139)
T ss_dssp SCCCCC
T ss_pred CCCCCC
Confidence 876544
No 2
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=2.3e-22 Score=122.33 Aligned_cols=85 Identities=29% Similarity=0.441 Sum_probs=79.8
Q ss_pred CCCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 032111 30 SQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSF 109 (147)
Q Consensus 30 ~~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~ 109 (147)
....++|||+|||+++++++|+++|++||.|..|.++.++.++.++|||||+|.+.++|+.|++.|++..+.|++|.|+|
T Consensus 4 ~~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~ 83 (93)
T d1h2vz_ 4 LKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDW 83 (93)
T ss_dssp TTTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEE
T ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCC
Q 032111 110 ANDRP 114 (147)
Q Consensus 110 ~~~~~ 114 (147)
+.+..
T Consensus 84 a~~~~ 88 (93)
T d1h2vz_ 84 DAGFK 88 (93)
T ss_dssp ESCCC
T ss_pred cCCCC
Confidence 87543
No 3
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.89 E-value=9.5e-23 Score=121.28 Aligned_cols=80 Identities=25% Similarity=0.479 Sum_probs=76.6
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeecC
Q 032111 33 QTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFAND 112 (147)
Q Consensus 33 ~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~~ 112 (147)
.++|||+|||+++++++|+++|++||.|..+.+++++.++++++||||+|.+.++|++||+.||+..+.++.|+|+++++
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 46899999999999999999999999999999999988999999999999999999999999999999999999999864
No 4
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.89 E-value=1.5e-22 Score=124.53 Aligned_cols=85 Identities=29% Similarity=0.484 Sum_probs=79.8
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 31 QSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 31 ~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
...++|||+|||+++++++|+++|.+||.|..+.++.++.++.+++||||+|.+.++|++||+.||+..|.++.|+|.++
T Consensus 6 ~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a 85 (99)
T d1whwa_ 6 SGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPS 85 (99)
T ss_dssp CSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEEC
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 34578999999999999999999999999999999999899999999999999999999999999999999999999999
Q ss_pred cCCCC
Q 032111 111 NDRPP 115 (147)
Q Consensus 111 ~~~~~ 115 (147)
..+..
T Consensus 86 ~~~~~ 90 (99)
T d1whwa_ 86 TIKKE 90 (99)
T ss_dssp CCCST
T ss_pred CCCCc
Confidence 87654
No 5
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=5.5e-23 Score=124.15 Aligned_cols=86 Identities=40% Similarity=0.627 Sum_probs=80.3
Q ss_pred CCCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 032111 30 SQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSF 109 (147)
Q Consensus 30 ~~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~ 109 (147)
+...++|||+|||+.+++++|+++|++||.|..+.++.++.++.++|||||+|.+.++|++|+..||+..+.|++|.|++
T Consensus 2 a~~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~ 81 (89)
T d2cqba1 2 ATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNL 81 (89)
T ss_dssp CCCCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEE
T ss_pred CCCCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 44568999999999999999999999999999999999988999999999999999999999999999999999999999
Q ss_pred ecCCCC
Q 032111 110 ANDRPP 115 (147)
Q Consensus 110 ~~~~~~ 115 (147)
++++..
T Consensus 82 a~p~~~ 87 (89)
T d2cqba1 82 AKPMRI 87 (89)
T ss_dssp CCCCCC
T ss_pred eCCCCC
Confidence 986543
No 6
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.88 E-value=2e-22 Score=121.37 Aligned_cols=83 Identities=25% Similarity=0.538 Sum_probs=78.2
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 31 QSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 31 ~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
.++.+|||+|||.++++++|+++|.+||.|..+.++.++.+++++|||||+|.+.++|++|+..||+..+.|+.|.|+|+
T Consensus 5 ~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~a 84 (88)
T d1rk8a_ 5 VEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWC 84 (88)
T ss_dssp C-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEES
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 34579999999999999999999999999999999999899999999999999999999999999999999999999998
Q ss_pred cCC
Q 032111 111 NDR 113 (147)
Q Consensus 111 ~~~ 113 (147)
.++
T Consensus 85 ~~k 87 (88)
T d1rk8a_ 85 FVK 87 (88)
T ss_dssp EEC
T ss_pred cCC
Confidence 764
No 7
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=2.7e-22 Score=119.24 Aligned_cols=80 Identities=29% Similarity=0.564 Sum_probs=76.6
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeecC
Q 032111 33 QTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFAND 112 (147)
Q Consensus 33 ~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~~ 112 (147)
.++|||+|||+++++++|+++|++||.|..+.++.+..++.++|||||+|.+.++|++|++.|++..+.|++|+|.++++
T Consensus 2 ~t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 2 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 46899999999999999999999999999999999988899999999999999999999999999999999999999874
No 8
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1.7e-22 Score=122.18 Aligned_cols=86 Identities=44% Similarity=0.810 Sum_probs=80.4
Q ss_pred CCCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 032111 30 SQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSF 109 (147)
Q Consensus 30 ~~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~ 109 (147)
+.+..+|||+|||+++++++|+++|++||.|..+.++.+..++.++|||||+|.+.++|++|+..|++..+.|++|.|++
T Consensus 2 ~~~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~ 81 (90)
T d1x5sa1 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81 (90)
T ss_dssp CCCCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEE
T ss_pred CCCCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 45668899999999999999999999999999999998888899999999999999999999999999999999999999
Q ss_pred ecCCCC
Q 032111 110 ANDRPP 115 (147)
Q Consensus 110 ~~~~~~ 115 (147)
+.++..
T Consensus 82 a~~~~~ 87 (90)
T d1x5sa1 82 AGKSSD 87 (90)
T ss_dssp EECCCC
T ss_pred cCCCCC
Confidence 987654
No 9
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=2.8e-22 Score=121.22 Aligned_cols=84 Identities=25% Similarity=0.479 Sum_probs=79.2
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 31 QSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 31 ~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
.+..+|||+|||.++++++|+++|++||.|..+.++.++.++.++|||||+|.+.++|++||+.|++..+.|+.|+|+++
T Consensus 6 ~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~a 85 (90)
T d2cq0a1 6 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWA 85 (90)
T ss_dssp SSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEee
Confidence 34578999999999999999999999999999999999889999999999999999999999999999999999999999
Q ss_pred cCCC
Q 032111 111 NDRP 114 (147)
Q Consensus 111 ~~~~ 114 (147)
+++.
T Consensus 86 kp~~ 89 (90)
T d2cq0a1 86 KPST 89 (90)
T ss_dssp SCCC
T ss_pred eCCC
Confidence 8653
No 10
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=4.4e-22 Score=123.01 Aligned_cols=85 Identities=28% Similarity=0.513 Sum_probs=80.1
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 31 QSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 31 ~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
+++++|||+|||+++++++|+++|.+||.|..+.++.++.++.++|||||+|.+.++|+.||+.||+..+.|++|+|+++
T Consensus 16 p~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a 95 (102)
T d2cpza1 16 PEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLK 95 (102)
T ss_dssp STTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCC
Q 032111 111 NDRPP 115 (147)
Q Consensus 111 ~~~~~ 115 (147)
.++..
T Consensus 96 ~~k~~ 100 (102)
T d2cpza1 96 RSKND 100 (102)
T ss_dssp CCSCC
T ss_pred CCCCC
Confidence 87654
No 11
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=5.6e-22 Score=117.36 Aligned_cols=77 Identities=25% Similarity=0.453 Sum_probs=74.8
Q ss_pred eEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeec
Q 032111 35 KLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFAN 111 (147)
Q Consensus 35 ~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~ 111 (147)
+|||+|||+++++++|+++|.+||.|..++++.++.++++++||||+|.+.++|+.|++.|++..+.|++|+|.+++
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~ 78 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ 78 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999985
No 12
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=3.6e-22 Score=121.43 Aligned_cols=82 Identities=32% Similarity=0.507 Sum_probs=78.4
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeecC
Q 032111 33 QTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFAND 112 (147)
Q Consensus 33 ~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~~ 112 (147)
.++|||+|||..+++++|+++|++||.|..+.++.++.++.++|||||+|.+.++|++|++.|++..+.|+.|+|+++++
T Consensus 9 ~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A~~ 88 (93)
T d1x5ua1 9 DATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKASA 88 (93)
T ss_dssp TTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEETTT
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCC
Confidence 47999999999999999999999999999999999989999999999999999999999999999999999999999987
Q ss_pred CC
Q 032111 113 RP 114 (147)
Q Consensus 113 ~~ 114 (147)
+.
T Consensus 89 ~~ 90 (93)
T d1x5ua1 89 HN 90 (93)
T ss_dssp TS
T ss_pred CC
Confidence 54
No 13
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=1.4e-21 Score=116.39 Aligned_cols=77 Identities=38% Similarity=0.642 Sum_probs=73.1
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEE
Q 032111 31 QSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRV 107 (147)
Q Consensus 31 ~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v 107 (147)
.+.++|||+|||+.+++++|+++|++||.|.++.++.++.++++++||||+|.+.++|++|+..||+..+.|++|+|
T Consensus 7 ~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 7 DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp CGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 34578999999999999999999999999999999999889999999999999999999999999999999999986
No 14
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=2.4e-21 Score=116.99 Aligned_cols=84 Identities=32% Similarity=0.589 Sum_probs=76.8
Q ss_pred CCCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 032111 30 SQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSF 109 (147)
Q Consensus 30 ~~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~ 109 (147)
.....+|||+|||+++++++|+++|++||.|..+.++.++.++.++|||||+|.+.++|++||+.. ..+.|+.|.|++
T Consensus 5 ~~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~~--~~l~Gr~i~v~~ 82 (90)
T d2cqga1 5 VQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQR--HMIDGRWCDCKL 82 (90)
T ss_dssp CCCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHSC--EEETTEEEEEEC
T ss_pred CcCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhcC--CccCCEEeEEEe
Confidence 345578999999999999999999999999999999999999999999999999999999999843 489999999999
Q ss_pred ecCCCC
Q 032111 110 ANDRPP 115 (147)
Q Consensus 110 ~~~~~~ 115 (147)
+.++..
T Consensus 83 a~~k~~ 88 (90)
T d2cqga1 83 PNSKQS 88 (90)
T ss_dssp CCTTCC
T ss_pred CCCCCC
Confidence 987654
No 15
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=8e-22 Score=117.46 Aligned_cols=81 Identities=33% Similarity=0.639 Sum_probs=75.0
Q ss_pred EEEcCCCCCCCHHHHHHHhhccCCeeEE-EEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeecCCC
Q 032111 36 LFVGGLSWGTDDSSLKEAFSNFGDITEA-KVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFANDRP 114 (147)
Q Consensus 36 i~v~nlp~~~~~~~l~~~f~~~g~i~~~-~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~~~~ 114 (147)
|||+|||+++++++|+++|.+||.|..+ .++++..+++++|||||+|.+.++|++||+.|++..+.|++|+|.++.++.
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 7999999999999999999999998664 678888889999999999999999999999999999999999999998766
Q ss_pred CC
Q 032111 115 PR 116 (147)
Q Consensus 115 ~~ 116 (147)
.+
T Consensus 81 ~k 82 (83)
T d1x5ta1 81 SK 82 (83)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 16
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.86 E-value=2.2e-21 Score=116.00 Aligned_cols=79 Identities=29% Similarity=0.564 Sum_probs=74.4
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCC--eEEEEEe
Q 032111 32 SQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNG--RNIRVSF 109 (147)
Q Consensus 32 ~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g--~~l~v~~ 109 (147)
..++|||+|||+.+++++|+++|++||.|..+.+++++.+++++|||||+|.+.++|++|++.||+..+.+ ++|.|++
T Consensus 5 ~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~~ 84 (85)
T d1b7fa2 5 KDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRL 84 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEEE
Confidence 44689999999999999999999999999999999998999999999999999999999999999999976 8899988
Q ss_pred e
Q 032111 110 A 110 (147)
Q Consensus 110 ~ 110 (147)
+
T Consensus 85 A 85 (85)
T d1b7fa2 85 A 85 (85)
T ss_dssp C
T ss_pred C
Confidence 6
No 17
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=8.6e-22 Score=117.84 Aligned_cols=80 Identities=26% Similarity=0.515 Sum_probs=77.0
Q ss_pred CeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeecCC
Q 032111 34 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFANDR 113 (147)
Q Consensus 34 ~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~~~ 113 (147)
.+|||+|||+.+++++|+++|.+||.|..++++.++.++++++||||+|.+.++|++|++.|++..+.|++|.|+++++.
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~ 81 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVG 81 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999864
No 18
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.86 E-value=1.3e-21 Score=116.09 Aligned_cols=79 Identities=13% Similarity=0.274 Sum_probs=69.0
Q ss_pred CeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeecC
Q 032111 34 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFAND 112 (147)
Q Consensus 34 ~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~~ 112 (147)
++|||+|||+++++++|+++|++||.|..+.++.+..+++++|||||+|.+.++|++|++.||+..+.|++|.|++++|
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred cEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 6999999999999999999999999998888877778889999999999999999999999999999999999999875
No 19
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=3.8e-21 Score=114.70 Aligned_cols=80 Identities=36% Similarity=0.654 Sum_probs=75.1
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeec
Q 032111 32 SQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFAN 111 (147)
Q Consensus 32 ~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~ 111 (147)
..++|||+|||+++++++|+++|++||.|..+.++.++.+++++|||||+|.+.++|++|++ +++..+.|+.|.|+.+.
T Consensus 5 ~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A~ 83 (84)
T d1l3ka1 5 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (84)
T ss_dssp GGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEeee
Confidence 34789999999999999999999999999999999999999999999999999999999998 68899999999998875
Q ss_pred C
Q 032111 112 D 112 (147)
Q Consensus 112 ~ 112 (147)
+
T Consensus 84 s 84 (84)
T d1l3ka1 84 S 84 (84)
T ss_dssp C
T ss_pred C
Confidence 3
No 20
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.86 E-value=2.9e-21 Score=113.71 Aligned_cols=77 Identities=31% Similarity=0.585 Sum_probs=73.0
Q ss_pred eEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeecC
Q 032111 35 KLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFAND 112 (147)
Q Consensus 35 ~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~~ 112 (147)
+|||+|||+++++++|+++|.+||.|..+.++.++ +++++|||||+|.+.++|++|++.||+..+.|++|+|+++.+
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~-~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~S 78 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS 78 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSS-CCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEECC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEee-ccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 59999999999999999999999999999998874 788999999999999999999999999999999999999864
No 21
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=2.8e-21 Score=119.48 Aligned_cols=82 Identities=34% Similarity=0.618 Sum_probs=77.5
Q ss_pred CeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeecCC
Q 032111 34 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFANDR 113 (147)
Q Consensus 34 ~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~~~ 113 (147)
++|||+|||+.+++++|+++|.+||.|..+.++.++.++.++|||||+|.+.++|++||+ +++..|.|+.|.|.++.++
T Consensus 21 ~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~~k 99 (103)
T d1x4ba1 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAVAR 99 (103)
T ss_dssp TEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCSSC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECccc
Confidence 689999999999999999999999999999999998899999999999999999999997 7999999999999999887
Q ss_pred CCC
Q 032111 114 PPR 116 (147)
Q Consensus 114 ~~~ 116 (147)
+.+
T Consensus 100 e~~ 102 (103)
T d1x4ba1 100 EES 102 (103)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 22
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=3.4e-21 Score=115.23 Aligned_cols=78 Identities=32% Similarity=0.639 Sum_probs=73.3
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCC--eEEEEEee
Q 032111 33 QTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNG--RNIRVSFA 110 (147)
Q Consensus 33 ~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g--~~l~v~~~ 110 (147)
.++|||+|||+.+++++|+++|++||.|..+.++.++.++.+++||||+|.+.++|++|++.||+..+.| ++|.|+|+
T Consensus 6 ~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~A 85 (85)
T d1fxla2 6 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFA 85 (85)
T ss_dssp TCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEeC
Confidence 4789999999999999999999999999999999998899999999999999999999999999999987 56888875
No 23
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=6.2e-21 Score=117.98 Aligned_cols=81 Identities=46% Similarity=0.719 Sum_probs=75.2
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeec
Q 032111 32 SQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFAN 111 (147)
Q Consensus 32 ~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~ 111 (147)
..++|||+|||+.+++++|+++|++||.|..+.++.++.+++++|||||+|.+.++|++||+.++. .+.|++|.|+++.
T Consensus 9 ~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~a~ 87 (103)
T d2cqda1 9 TFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNLAY 87 (103)
T ss_dssp SSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEEST
T ss_pred CCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEEcC
Confidence 346799999999999999999999999999999999989999999999999999999999998764 8999999999987
Q ss_pred CC
Q 032111 112 DR 113 (147)
Q Consensus 112 ~~ 113 (147)
..
T Consensus 88 ~~ 89 (103)
T d2cqda1 88 LG 89 (103)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 24
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=8.5e-21 Score=114.60 Aligned_cols=82 Identities=28% Similarity=0.516 Sum_probs=74.8
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeec
Q 032111 32 SQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFAN 111 (147)
Q Consensus 32 ~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~ 111 (147)
+.++|||+|||..+++++|+++|++||.|..+.++.+..++ ++||||+|.+.++|++|+..|++..+.|+.|+|.+++
T Consensus 7 ~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~--~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a~ 84 (90)
T d2cqia1 7 QPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT 84 (90)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSS--CCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCcc--ceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 45799999999999999999999999999999998876543 6799999999999999999999999999999999998
Q ss_pred CCCC
Q 032111 112 DRPP 115 (147)
Q Consensus 112 ~~~~ 115 (147)
++..
T Consensus 85 ~~~~ 88 (90)
T d2cqia1 85 TPSS 88 (90)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 6543
No 25
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=4.1e-21 Score=116.93 Aligned_cols=83 Identities=25% Similarity=0.577 Sum_probs=76.4
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecC-CCCccceEEEEEeCCHHHHHHHHHHh-cCCeeCCeEEEEEe
Q 032111 32 SQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITER-ESGKSRGFGFVTYDSNESASSAQSAM-DGQELNGRNIRVSF 109 (147)
Q Consensus 32 ~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~-~~~~~~g~afv~f~~~~~a~~ai~~l-~~~~~~g~~l~v~~ 109 (147)
...+|||+|||+++++++|+++|.+||.|..+.++.+. .+++++|||||+|.+.++|++||..| ++..+.|++|.|+|
T Consensus 7 ~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~~ 86 (94)
T d2cpha1 7 TTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEW 86 (94)
T ss_dssp CCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEEE
Confidence 44789999999999999999999999999999998764 47899999999999999999999998 88999999999999
Q ss_pred ecCCC
Q 032111 110 ANDRP 114 (147)
Q Consensus 110 ~~~~~ 114 (147)
+++..
T Consensus 87 A~~~~ 91 (94)
T d2cpha1 87 ADSEV 91 (94)
T ss_dssp CCCCC
T ss_pred cCCCC
Confidence 98754
No 26
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=3e-21 Score=119.61 Aligned_cols=81 Identities=33% Similarity=0.706 Sum_probs=77.3
Q ss_pred CeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeecCC
Q 032111 34 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFANDR 113 (147)
Q Consensus 34 ~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~~~ 113 (147)
++|||+|||+++++++|+++|++||.|..+.++.++.+++++|||||+|.+.++|++|++.|++..+.|+.|+|+++.+.
T Consensus 9 rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~~~ 88 (104)
T d1p1ta_ 9 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASE 88 (104)
T ss_dssp SCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETTCT
T ss_pred CEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCC
Confidence 68999999999999999999999999999999999889999999999999999999999999999999999999998764
Q ss_pred C
Q 032111 114 P 114 (147)
Q Consensus 114 ~ 114 (147)
.
T Consensus 89 ~ 89 (104)
T d1p1ta_ 89 K 89 (104)
T ss_dssp T
T ss_pred C
Confidence 3
No 27
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=8.6e-21 Score=113.39 Aligned_cols=78 Identities=29% Similarity=0.596 Sum_probs=72.0
Q ss_pred EEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCC---ccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeecC
Q 032111 36 LFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESG---KSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFAND 112 (147)
Q Consensus 36 i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~---~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~~ 112 (147)
|||+|||+++++++|+++|++||.|..+.++.++.++ .++|||||+|.+.++|++|++.||+..+.|+.|.|+++..
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 7999999999999999999999999999998876554 4689999999999999999999999999999999999864
Q ss_pred C
Q 032111 113 R 113 (147)
Q Consensus 113 ~ 113 (147)
.
T Consensus 81 ~ 81 (85)
T d2cpfa1 81 A 81 (85)
T ss_dssp S
T ss_pred C
Confidence 3
No 28
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=7.5e-21 Score=117.13 Aligned_cols=87 Identities=25% Similarity=0.517 Sum_probs=77.7
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhhccCCee--------EEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCC
Q 032111 31 QSQTKLFVGGLSWGTDDSSLKEAFSNFGDIT--------EAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNG 102 (147)
Q Consensus 31 ~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~--------~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g 102 (147)
....+|||+|||+.+++++|+++|.+||.|. .+.+..+..++++++||||+|.+.++|++||+.|++..|.|
T Consensus 6 ~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 85 (101)
T d2cpea1 6 SDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQG 85 (101)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEETT
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEECC
Confidence 3457999999999999999999999999763 45566677788999999999999999999999999999999
Q ss_pred eEEEEEeecCCCCCC
Q 032111 103 RNIRVSFANDRPPRS 117 (147)
Q Consensus 103 ~~l~v~~~~~~~~~~ 117 (147)
+.|+|+++++++++.
T Consensus 86 r~i~V~~a~~~~p~~ 100 (101)
T d2cpea1 86 SKLKVSLARKKPPMN 100 (101)
T ss_dssp EECEEECSSCCCCST
T ss_pred EEEEEEEcCCCCCCC
Confidence 999999999877653
No 29
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=2.5e-20 Score=113.16 Aligned_cols=82 Identities=30% Similarity=0.617 Sum_probs=75.1
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 31 QSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 31 ~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
...++|||+|||+++++++|+++|.+||.|..+.++.++. .+++||||+|.+.++|++|+..|++..+.|+.|.|+++
T Consensus 9 ~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~--~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A 86 (93)
T d2cq3a1 9 STPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNER--GSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 86 (93)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTT--TTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcceeeecccccccc--CCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEec
Confidence 3457899999999999999999999999999999988753 36899999999999999999999999999999999999
Q ss_pred cCCC
Q 032111 111 NDRP 114 (147)
Q Consensus 111 ~~~~ 114 (147)
+++.
T Consensus 87 ~~r~ 90 (93)
T d2cq3a1 87 TARV 90 (93)
T ss_dssp CSSC
T ss_pred CcCC
Confidence 8764
No 30
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=1.8e-21 Score=114.32 Aligned_cols=76 Identities=36% Similarity=0.699 Sum_probs=72.6
Q ss_pred CeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 34 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 34 ~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
++|||+|||+++++++|+++|++||.|..+.++.++.+++++|||||+|.+.++|++|++ +++..+.|+.|.|+.+
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 579999999999999999999999999999999999999999999999999999999998 7999999999999875
No 31
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=6.6e-21 Score=114.87 Aligned_cols=80 Identities=33% Similarity=0.593 Sum_probs=73.9
Q ss_pred CeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeecCC
Q 032111 34 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFANDR 113 (147)
Q Consensus 34 ~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~~~ 113 (147)
.+|||+|||+++++++|+++|.+||.|..+.++.+. ..++|||||+|.+.++|++||+.||+..+.|+.|.|.+++++
T Consensus 9 ~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~--~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~~ 86 (89)
T d1cvja2 9 GNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 86 (89)
T ss_dssp TEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBT--TBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCCT
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeec--CCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCC
Confidence 579999999999999999999999999999998875 346799999999999999999999999999999999999876
Q ss_pred CC
Q 032111 114 PP 115 (147)
Q Consensus 114 ~~ 115 (147)
..
T Consensus 87 ~~ 88 (89)
T d1cvja2 87 KE 88 (89)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 32
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=3e-20 Score=109.52 Aligned_cols=77 Identities=36% Similarity=0.651 Sum_probs=73.0
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 33 QTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 33 ~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
.++|||+|||+++++++|+++|++||.|..+.++.++.+++++|||||+|.+.+++++|+. +++..|.|+.|.|+.+
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 3789999999999999999999999999999999999999999999999999999999997 8999999999999875
No 33
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=6.4e-21 Score=111.40 Aligned_cols=75 Identities=39% Similarity=0.748 Sum_probs=70.9
Q ss_pred eEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 35 KLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 35 ~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
+|||+|||+++++++|+++|++||.|..+.++.++.+++++|||||+|.+.++|++||+ +++..+.|+.|.|+.+
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 48999999999999999999999999999999999999999999999999999999998 7989999999988653
No 34
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=2.2e-20 Score=114.35 Aligned_cols=85 Identities=26% Similarity=0.550 Sum_probs=77.5
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhc------CCeeCCeE
Q 032111 31 QSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMD------GQELNGRN 104 (147)
Q Consensus 31 ~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~------~~~~~g~~ 104 (147)
...++|||+|||+++++++|+++|.+||.+..+.++.+..++.++|||||+|.+.++|++||+.|+ +..+.|+.
T Consensus 6 ~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~ 85 (98)
T d1x4ha1 6 TEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQ 85 (98)
T ss_dssp CCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCE
T ss_pred CCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCEE
Confidence 345799999999999999999999999999999999988889999999999999999999999887 56789999
Q ss_pred EEEEeecCCCC
Q 032111 105 IRVSFANDRPP 115 (147)
Q Consensus 105 l~v~~~~~~~~ 115 (147)
|+|.++.+++.
T Consensus 86 l~v~~a~~k~~ 96 (98)
T d1x4ha1 86 LKVDLAVTRDE 96 (98)
T ss_dssp EEEECCCCCCC
T ss_pred EEEEECCCCCc
Confidence 99999987643
No 35
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.3e-20 Score=116.07 Aligned_cols=78 Identities=26% Similarity=0.428 Sum_probs=74.8
Q ss_pred CeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeecC
Q 032111 34 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFAND 112 (147)
Q Consensus 34 ~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~~ 112 (147)
++|||+|||+.+++++|+++|..||.|..+.++.++.+++++|||||+|.+.++|++|++ |++..|.|+.|.|.++.+
T Consensus 19 ~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a~~ 96 (101)
T d2cq4a1 19 RTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQASQA 96 (101)
T ss_dssp TEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEECCC
Confidence 689999999999999999999999999999999999999999999999999999999996 999999999999998764
No 36
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.83 E-value=1.2e-20 Score=112.98 Aligned_cols=82 Identities=26% Similarity=0.458 Sum_probs=71.1
Q ss_pred CCCeEEEcCCCCCCC-HHHHHHHhhccCCeeEEEEEec-CCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 032111 32 SQTKLFVGGLSWGTD-DSSLKEAFSNFGDITEAKVITE-RESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSF 109 (147)
Q Consensus 32 ~~~~i~v~nlp~~~~-~~~l~~~f~~~g~i~~~~~~~~-~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~ 109 (147)
.+++|||+|||++++ +++|+++|++||.|..+.++.+ ..+++++|||||+|.+.++|++|++ ||+..+.|+.|.|++
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~ 81 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSL 81 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEE
Confidence 468999999999876 5569999999999999988764 5678899999999999999999996 999999999999999
Q ss_pred ecCCC
Q 032111 110 ANDRP 114 (147)
Q Consensus 110 ~~~~~ 114 (147)
++++|
T Consensus 82 a~~kP 86 (86)
T d2ghpa3 82 ADKKP 86 (86)
T ss_dssp CCCCC
T ss_pred cCCCC
Confidence 98754
No 37
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=6.4e-20 Score=111.75 Aligned_cols=80 Identities=21% Similarity=0.475 Sum_probs=71.7
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 31 QSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 31 ~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
.+.++|||+|||+.+++++|+++|.+||.|..+.+..+ ...++||||+|.+.++|++||+.||+..+.+++|+|+++
T Consensus 12 ~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~---~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a 88 (95)
T d1x4aa1 12 NNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNR---RGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFP 88 (95)
T ss_dssp CCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCS---SSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEeccc---ccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEec
Confidence 44578999999999999999999999999988876543 456789999999999999999999999999999999998
Q ss_pred cCC
Q 032111 111 NDR 113 (147)
Q Consensus 111 ~~~ 113 (147)
++.
T Consensus 89 ~~~ 91 (95)
T d1x4aa1 89 RSG 91 (95)
T ss_dssp CCC
T ss_pred cCC
Confidence 753
No 38
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=4.3e-21 Score=118.46 Aligned_cols=86 Identities=22% Similarity=0.403 Sum_probs=79.1
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 31 QSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 31 ~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
.+.++|||+|||.++++++|+++|.+||.|..+.+..+..++++++||||+|.+.++|++|++.||+..|.|++|.|+++
T Consensus 16 ~ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~a 95 (102)
T d2cpxa1 16 EPNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFG 95 (102)
T ss_dssp SCCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeC
Confidence 34579999999999999999999999999988888887778899999999999999999999999999999999999999
Q ss_pred cCCCCC
Q 032111 111 NDRPPR 116 (147)
Q Consensus 111 ~~~~~~ 116 (147)
+++..+
T Consensus 96 k~k~~r 101 (102)
T d2cpxa1 96 KNKKQR 101 (102)
T ss_dssp CCCSCC
T ss_pred CCcccC
Confidence 986554
No 39
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1e-19 Score=111.00 Aligned_cols=80 Identities=29% Similarity=0.660 Sum_probs=73.1
Q ss_pred CCCCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEE
Q 032111 29 MSQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVS 108 (147)
Q Consensus 29 ~~~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~ 108 (147)
..+..++|||+|||..+++++|+++|++||.|..+.++.+ ++||||+|.+.++|++|+..|++..+.|+.|+|.
T Consensus 14 ~~~~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~------kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~ 87 (96)
T d1x4ga1 14 SSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCY 87 (96)
T ss_dssp SCSSCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCCCCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEec------ceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 3445578999999999999999999999999999999865 5799999999999999999999999999999999
Q ss_pred eecCCC
Q 032111 109 FANDRP 114 (147)
Q Consensus 109 ~~~~~~ 114 (147)
|+++.+
T Consensus 88 ~ak~~p 93 (96)
T d1x4ga1 88 WGKESP 93 (96)
T ss_dssp CCCCCC
T ss_pred EcCCCC
Confidence 998654
No 40
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=9.5e-21 Score=110.57 Aligned_cols=75 Identities=27% Similarity=0.520 Sum_probs=70.2
Q ss_pred eEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 35 KLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 35 ~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
+|||+|||+++++++|+++|++||.|..+.++.++.+++++|||||+|.+.++|++||+ .++..+.|+.|.|+.|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEECCEEeEEEEC
Confidence 58999999999999999999999999999999999999999999999999999999998 4668899999988764
No 41
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=2.3e-20 Score=108.90 Aligned_cols=75 Identities=32% Similarity=0.615 Sum_probs=71.4
Q ss_pred eEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 35 KLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 35 ~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
+|||+|||+++++++|+++|++||.+..+.++.++.++.+++||||+|.+.++|++|++ +++..+.|++|.|++|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 58999999999999999999999999999998888889999999999999999999997 9999999999999875
No 42
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1e-19 Score=114.29 Aligned_cols=81 Identities=20% Similarity=0.378 Sum_probs=73.1
Q ss_pred CCCCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEE
Q 032111 29 MSQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVS 108 (147)
Q Consensus 29 ~~~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~ 108 (147)
++...++|||+|||+.+++++|+++|++||.|..|.+..+ +.++|||||+|.+.++|..|++.||+..|.|+.|.|.
T Consensus 3 pp~~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~---~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~ 79 (114)
T d2f9da1 3 PPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNT---PETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVL 79 (114)
T ss_dssp CTTCCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECS---TTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEE
T ss_pred ccCCCCEEEEECCCCCCCHHHHHHHHhhcCCeEeeccccc---CCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 3445679999999999999999999999999999988754 4568999999999999999999999999999999999
Q ss_pred eecC
Q 032111 109 FAND 112 (147)
Q Consensus 109 ~~~~ 112 (147)
++..
T Consensus 80 ~a~~ 83 (114)
T d2f9da1 80 YYNA 83 (114)
T ss_dssp ECCH
T ss_pred EcCC
Confidence 9764
No 43
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=9.9e-20 Score=112.63 Aligned_cols=83 Identities=25% Similarity=0.515 Sum_probs=72.3
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecC-CCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 32 SQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITER-ESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 32 ~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~-~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
+.++|||+|||+.+++++|+++|.+|| +..+.++.+. .+++++|||||+|.+.++|++|+. ||+..|.++.|+|.++
T Consensus 14 p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~~-~~~~~~~gr~l~V~~a 91 (104)
T d1wi8a_ 14 PPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALS-LNEESLGNKRIRVDVA 91 (104)
T ss_dssp SCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHHG-GGTCEETTEECEEEEC
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHHH-cCCCEECCEEEEEEEC
Confidence 458999999999999999999999998 6677666654 467899999999999999987775 9999999999999999
Q ss_pred cCCCCC
Q 032111 111 NDRPPR 116 (147)
Q Consensus 111 ~~~~~~ 116 (147)
.+....
T Consensus 92 ~~~~~~ 97 (104)
T d1wi8a_ 92 DQAQDK 97 (104)
T ss_dssp CCCCCC
T ss_pred CCCCCC
Confidence 876443
No 44
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.80 E-value=9.8e-20 Score=108.94 Aligned_cols=79 Identities=15% Similarity=0.323 Sum_probs=70.0
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 32 SQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 32 ~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
..+.|||+|||+.+++++|+++|..|+.+....++....+++++|+|||+|.+.++|++|++.||+..+.+++|+|+++
T Consensus 8 ~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 8 GPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp SSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 3467999999999999999999999998866434444467999999999999999999999999999999999999874
No 45
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=3.2e-19 Score=110.28 Aligned_cols=84 Identities=20% Similarity=0.298 Sum_probs=75.5
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeec
Q 032111 32 SQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFAN 111 (147)
Q Consensus 32 ~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~ 111 (147)
....|||+|||+++++++|+++|..++.+....++.+..+++++|+|||+|.+.++|++|++ +++..|.++.|.|.+++
T Consensus 14 ~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~~~ 92 (104)
T d1wg5a_ 14 NDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIFKSS 92 (104)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEEEC
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEECC
Confidence 44689999999999999999999999988876666777788999999999999999999997 89999999999999998
Q ss_pred CCCCC
Q 032111 112 DRPPR 116 (147)
Q Consensus 112 ~~~~~ 116 (147)
..+..
T Consensus 93 ~~~~~ 97 (104)
T d1wg5a_ 93 RAEVR 97 (104)
T ss_dssp TTTSC
T ss_pred HHHhc
Confidence 76544
No 46
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=4e-19 Score=106.02 Aligned_cols=78 Identities=21% Similarity=0.322 Sum_probs=72.1
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeecC
Q 032111 33 QTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFAND 112 (147)
Q Consensus 33 ~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~~ 112 (147)
.++|||+|||.++++++|+++|+.+|.|..+.+..+ .+++++|||||+|.+.++|++||+ +++..+.|+.|.|++...
T Consensus 6 ~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~-~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~d 83 (85)
T d1zh5a2 6 NRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRT-LHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKDD 83 (85)
T ss_dssp TTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEEC-TTCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGGG
T ss_pred cCEEEEECCCCCCCHHHHHHHHHHhcccccceeeee-ccCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcCC
Confidence 378999999999999999999999999999998776 478899999999999999999997 799999999999998653
No 47
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1.9e-19 Score=110.98 Aligned_cols=84 Identities=15% Similarity=0.261 Sum_probs=73.5
Q ss_pred CCCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 032111 30 SQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSF 109 (147)
Q Consensus 30 ~~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~ 109 (147)
+....+|||+|||+++++++|+++|..++ +..+.++.+ .++..++||||+|.+.++|++|++ +++..|.++.|+|.+
T Consensus 12 ~~~~~~v~v~nLp~~~te~dl~~~F~~~~-~~~v~~~~~-~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~ 88 (102)
T d1weza_ 12 STTGHCVHMRGLPYRATENDIYNFFSPLN-PMRVHIEIG-PDGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFL 88 (102)
T ss_dssp CSSSCEEEEESCCTTCCHHHHHHSSCSCC-CSEEEEEES-SSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEE
T ss_pred CCCCCEEEEeCCCCcCCHHHHHHHHhccC-cceeeeEEe-cCCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEE
Confidence 44567999999999999999999999997 556777776 457899999999999999999997 899999999999999
Q ss_pred ecCCCCC
Q 032111 110 ANDRPPR 116 (147)
Q Consensus 110 ~~~~~~~ 116 (147)
++.++..
T Consensus 89 s~~~~~~ 95 (102)
T d1weza_ 89 NSTAGTS 95 (102)
T ss_dssp ECCCCCC
T ss_pred cCCCCCC
Confidence 8876543
No 48
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.80 E-value=1.2e-20 Score=114.06 Aligned_cols=82 Identities=27% Similarity=0.451 Sum_probs=73.3
Q ss_pred CCCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 032111 30 SQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSF 109 (147)
Q Consensus 30 ~~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~ 109 (147)
+....+|||+|||+.+++++|+++|.+||.|..+.++.+ .+++++|||||+|.+.++|++||+ |++..+.|++|.|.+
T Consensus 10 ~~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~-~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ 87 (91)
T d1fjeb1 10 STTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDV-RTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEK 87 (91)
T ss_dssp CSSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEE-EEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEEC
T ss_pred CCCCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeec-CCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEe
Confidence 334568999999999999999999999999888777544 678899999999999999999997 999999999999999
Q ss_pred ecCC
Q 032111 110 ANDR 113 (147)
Q Consensus 110 ~~~~ 113 (147)
++++
T Consensus 88 ak~k 91 (91)
T d1fjeb1 88 PKGR 91 (91)
T ss_dssp CCCS
T ss_pred cCCC
Confidence 8764
No 49
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=3.5e-20 Score=111.18 Aligned_cols=74 Identities=20% Similarity=0.326 Sum_probs=66.9
Q ss_pred CeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeecCC
Q 032111 34 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFANDR 113 (147)
Q Consensus 34 ~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~~~ 113 (147)
.+|||+|||+.+++++|+++|++||.|..+.+..+ |||||+|.+.++|++||+.||+..|.|+.|.|.+.+..
T Consensus 1 nrvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~~-------g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~ 73 (87)
T d3begb1 1 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD-------GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 73 (87)
T ss_dssp CCEEEEECCSSCCTTHHHHHHGGGSCEEEEEECTT-------SEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEE
T ss_pred CeEEEECCCCcCCHHHHHHHHhhhccccccccccc-------ceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecC
Confidence 36999999999999999999999999999987643 69999999999999999999999999999988876544
Q ss_pred C
Q 032111 114 P 114 (147)
Q Consensus 114 ~ 114 (147)
.
T Consensus 74 ~ 74 (87)
T d3begb1 74 V 74 (87)
T ss_dssp E
T ss_pred c
Confidence 3
No 50
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=9.2e-20 Score=112.23 Aligned_cols=81 Identities=22% Similarity=0.454 Sum_probs=72.9
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 31 QSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 31 ~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
.+.++|||+|||+++++++|+++|++||.|..+.+..+ .++.+++||||+|.+.++|++||+.||+..|.|+++.|.++
T Consensus 16 ~~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~-~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~ 94 (101)
T d1x5oa1 16 QDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRD-SSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPT 94 (101)
T ss_dssp CCTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEEC-SSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeecc-cccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCC
Confidence 34578999999999999999999999999999988877 57889999999999999999999999999999998877665
Q ss_pred cC
Q 032111 111 ND 112 (147)
Q Consensus 111 ~~ 112 (147)
++
T Consensus 95 ~P 96 (101)
T d1x5oa1 95 EP 96 (101)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 51
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=4.2e-19 Score=108.63 Aligned_cols=75 Identities=27% Similarity=0.566 Sum_probs=67.3
Q ss_pred CCCCeEEEcCCC-CCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 032111 31 QSQTKLFVGGLS-WGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSF 109 (147)
Q Consensus 31 ~~~~~i~v~nlp-~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~ 109 (147)
....+|||.||| ..+++++|+++|.+||.|..+.+. ++||||+|.+.++|++||..||+..+.|+.|+|++
T Consensus 13 ~~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i~--------rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~ 84 (98)
T d1wf2a_ 13 SMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVH--------KGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84 (98)
T ss_dssp SCCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEEE--------TEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEE
T ss_pred CCCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEEe--------CCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 344689999997 567888999999999999999873 57999999999999999999999999999999999
Q ss_pred ecCC
Q 032111 110 ANDR 113 (147)
Q Consensus 110 ~~~~ 113 (147)
+..+
T Consensus 85 a~~~ 88 (98)
T d1wf2a_ 85 AAEP 88 (98)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 9754
No 52
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.79 E-value=2e-19 Score=108.26 Aligned_cols=77 Identities=26% Similarity=0.401 Sum_probs=69.4
Q ss_pred CCCeEEEcCCCCCCCHHHH---HHHhhccCCeeEEEEEecCCCCc---cceEEEEEeCCHHHHHHHHHHhcCCeeCCeEE
Q 032111 32 SQTKLFVGGLSWGTDDSSL---KEAFSNFGDITEAKVITERESGK---SRGFGFVTYDSNESASSAQSAMDGQELNGRNI 105 (147)
Q Consensus 32 ~~~~i~v~nlp~~~~~~~l---~~~f~~~g~i~~~~~~~~~~~~~---~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l 105 (147)
..++|||+|||+.+++++| .++|.+||.|..+.+++++.++. +++||||+|.+.++|++|++.||+..+.|++|
T Consensus 7 q~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~l 86 (89)
T d2cpia1 7 QKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTL 86 (89)
T ss_dssp CSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred ecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEE
Confidence 3478999999999999999 67899999999999998876554 45899999999999999999999999999999
Q ss_pred EEE
Q 032111 106 RVS 108 (147)
Q Consensus 106 ~v~ 108 (147)
+|+
T Consensus 87 kvS 89 (89)
T d2cpia1 87 KAS 89 (89)
T ss_dssp EEE
T ss_pred EEC
Confidence 884
No 53
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.79 E-value=3.6e-19 Score=108.53 Aligned_cols=80 Identities=23% Similarity=0.498 Sum_probs=71.0
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 31 QSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 31 ~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
.+.++|||+|||+.+++++|+++|.++|.|..+. .++++++||||+|.+.++|++|++.||+..+.|++|.|.++
T Consensus 14 ~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~-----~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a 88 (96)
T d1fjca_ 14 RAARTLLAKNLSFNITEDELKEVFEDALEIRLVS-----QDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYT 88 (96)
T ss_dssp TGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEE-----ETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcccceeee-----ecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 3457999999999999999999999999776543 25678899999999999999999999999999999999999
Q ss_pred cCCCC
Q 032111 111 NDRPP 115 (147)
Q Consensus 111 ~~~~~ 115 (147)
.++..
T Consensus 89 ~~k~~ 93 (96)
T d1fjca_ 89 GEKGG 93 (96)
T ss_dssp SSSCC
T ss_pred CCCCC
Confidence 87654
No 54
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.5e-18 Score=103.65 Aligned_cols=78 Identities=27% Similarity=0.433 Sum_probs=69.8
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 31 QSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 31 ~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
...++|||+|||+++++++|+++|++||.+..+.+.. +++||||+|.+.++|.+|+..||+..+.|+.|.|+++
T Consensus 6 ~~~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~~------~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~a 79 (86)
T d2cpda1 6 SSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKK------IRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 79 (86)
T ss_dssp SCCCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEEE------CSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECC
T ss_pred cCCCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEcc------ccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEec
Confidence 3447899999999999999999999999988776644 3579999999999999999999999999999999999
Q ss_pred cCCC
Q 032111 111 NDRP 114 (147)
Q Consensus 111 ~~~~ 114 (147)
+++.
T Consensus 80 kP~~ 83 (86)
T d2cpda1 80 KPVD 83 (86)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8654
No 55
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=2.9e-19 Score=105.46 Aligned_cols=77 Identities=26% Similarity=0.479 Sum_probs=68.2
Q ss_pred CeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCC-eeCCeEEEEEeecC
Q 032111 34 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQ-ELNGRNIRVSFAND 112 (147)
Q Consensus 34 ~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~-~~~g~~l~v~~~~~ 112 (147)
.+|||+|||+++++++|+++|.+||.+..+.+... ++||||+|.+.++|++|++.|++. .+.|++|.|+++.+
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~~------rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~ 75 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLK------SGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVS 75 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEEE------TTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEEecc------cceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCC
Confidence 47999999999999999999999998877655543 579999999999999999999985 79999999999997
Q ss_pred CCCC
Q 032111 113 RPPR 116 (147)
Q Consensus 113 ~~~~ 116 (147)
+..+
T Consensus 76 k~~r 79 (80)
T d2cqha1 76 KKLR 79 (80)
T ss_dssp CCCC
T ss_pred cCcC
Confidence 6543
No 56
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.78 E-value=5.1e-19 Score=108.22 Aligned_cols=79 Identities=25% Similarity=0.370 Sum_probs=70.9
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 31 QSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 31 ~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
....+|||.|||+.+++++|+++|.+||.|..+.+.. ++||||+|.+.++|++||+.||+..|.++.|+|.+.
T Consensus 13 ~~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~ 85 (98)
T d1wg4a_ 13 RSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK-------DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYI 85 (98)
T ss_dssp SCSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET-------TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhhcccccccccc-------cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEE
Confidence 3457899999999999999999999999999998754 379999999999999999999999999999999998
Q ss_pred cCCCCC
Q 032111 111 NDRPPR 116 (147)
Q Consensus 111 ~~~~~~ 116 (147)
+.++.+
T Consensus 86 ~~~~~~ 91 (98)
T d1wg4a_ 86 RVYPER 91 (98)
T ss_dssp EEECCC
T ss_pred ecCCCC
Confidence 765543
No 57
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.78 E-value=6.2e-19 Score=105.39 Aligned_cols=77 Identities=27% Similarity=0.587 Sum_probs=70.9
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeec
Q 032111 32 SQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFAN 111 (147)
Q Consensus 32 ~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~ 111 (147)
..++|||+|||.++++++|+++|++||.|..+.+.++ ++||||+|.+.++|++|+..||+..+.|+.|+|+++.
T Consensus 7 ~~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~------k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~ 80 (86)
T d2cpja1 7 QRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFAC 80 (86)
T ss_dssp CTTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETT------TTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeecc------cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 3468999999999999999999999999999988765 4699999999999999999999999999999999998
Q ss_pred CCC
Q 032111 112 DRP 114 (147)
Q Consensus 112 ~~~ 114 (147)
...
T Consensus 81 ~~~ 83 (86)
T d2cpja1 81 HSA 83 (86)
T ss_dssp CCS
T ss_pred CcC
Confidence 653
No 58
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.5e-18 Score=104.06 Aligned_cols=79 Identities=22% Similarity=0.354 Sum_probs=69.4
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCee-CCeEEEEEe
Q 032111 31 QSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQEL-NGRNIRVSF 109 (147)
Q Consensus 31 ~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~-~g~~l~v~~ 109 (147)
++.++|||+|||+++++++|+++|++||.|..+.+... +.+++|||+|.+.++|.+|+..|++..+ .|+.|+|++
T Consensus 8 pPs~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~----~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~ 83 (88)
T d2adca2 8 PPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQ----KDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSF 83 (88)
T ss_dssp CSCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECS----SSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeee----cccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEe
Confidence 45689999999999999999999999999988766543 3467999999999999999999999988 589999999
Q ss_pred ecCC
Q 032111 110 ANDR 113 (147)
Q Consensus 110 ~~~~ 113 (147)
++++
T Consensus 84 sk~~ 87 (88)
T d2adca2 84 SKST 87 (88)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 8763
No 59
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.6e-18 Score=103.98 Aligned_cols=76 Identities=14% Similarity=0.291 Sum_probs=65.6
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeec
Q 032111 32 SQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFAN 111 (147)
Q Consensus 32 ~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~ 111 (147)
...+|||.|||+++++++|+++|.+|| +..+.+ .+.++||||+|.+.++|++|+..||+..+.|++|.|++++
T Consensus 4 ~s~~i~V~nLp~~~t~~~l~~lF~~~G-~~~~~~------~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~ 76 (88)
T d1wg1a_ 4 GSSGILVKNLPQDSNCQEVHDLLKDYD-LKYCYV------DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQP 76 (88)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHTCSSC-CCCEEE------EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCCEEEEeCCCCccChHHHHHHHHhcC-ceeeee------eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 347899999999999999999999999 333333 2346899999999999999999999999999999999987
Q ss_pred CCC
Q 032111 112 DRP 114 (147)
Q Consensus 112 ~~~ 114 (147)
...
T Consensus 77 ~~~ 79 (88)
T d1wg1a_ 77 TDA 79 (88)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 60
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1e-19 Score=105.30 Aligned_cols=71 Identities=30% Similarity=0.585 Sum_probs=67.5
Q ss_pred EEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEE
Q 032111 36 LFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIR 106 (147)
Q Consensus 36 i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~ 106 (147)
|||+|||+++++++|+++|.+||.|..+.+..++.++.++++|||+|.+.++|++|++.||+..+.|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 79999999999999999999999999999999988999999999999999999999999999999988653
No 61
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=6.5e-19 Score=107.39 Aligned_cols=83 Identities=25% Similarity=0.438 Sum_probs=73.0
Q ss_pred CeEEEcCCCCCCCHHHHHHHhhccCC-eeEEEEEecC-CCCccceEEEEEeCCHHHHHHHHHHhcC--CeeCCeEEEEEe
Q 032111 34 TKLFVGGLSWGTDDSSLKEAFSNFGD-ITEAKVITER-ESGKSRGFGFVTYDSNESASSAQSAMDG--QELNGRNIRVSF 109 (147)
Q Consensus 34 ~~i~v~nlp~~~~~~~l~~~f~~~g~-i~~~~~~~~~-~~~~~~g~afv~f~~~~~a~~ai~~l~~--~~~~g~~l~v~~ 109 (147)
++|||+|||..+++++|+++|++||. |..+.++.+. .++.++|||||+|.+.++|.+|++.|++ ..+.++.|.|.|
T Consensus 2 ~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~~ 81 (96)
T d2disa1 2 CRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDW 81 (96)
T ss_dssp EEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEEE
T ss_pred CEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEEE
Confidence 58999999999999999999999995 8889888774 4678999999999999999999999864 466799999999
Q ss_pred ecCCCCC
Q 032111 110 ANDRPPR 116 (147)
Q Consensus 110 ~~~~~~~ 116 (147)
+++....
T Consensus 82 A~p~~~~ 88 (96)
T d2disa1 82 AEPEIDV 88 (96)
T ss_dssp SCSSCST
T ss_pred cCCCCCC
Confidence 9876544
No 62
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.2e-18 Score=102.57 Aligned_cols=77 Identities=30% Similarity=0.531 Sum_probs=69.6
Q ss_pred CCCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 032111 30 SQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSF 109 (147)
Q Consensus 30 ~~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~ 109 (147)
+..+++|||+|++ +++++|+++|++||.|..+.+.++ ++||||+|.+.++|.+|+..||+..+.|++|+|+|
T Consensus 2 p~~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~~------~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~ 73 (79)
T d2bz2a1 2 PRKGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDPP------RNCAFVTYEKMESADQAVAELNGTQVESVQLKVNI 73 (79)
T ss_dssp CCCCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEETT------TTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEE
T ss_pred CCCCCEEEEECCC--CCHHHHHHHHhccCccceeeeccC------CCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEE
Confidence 4567899999986 899999999999999999988654 46999999999999999999999999999999999
Q ss_pred ecCCC
Q 032111 110 ANDRP 114 (147)
Q Consensus 110 ~~~~~ 114 (147)
++++|
T Consensus 74 a~~~P 78 (79)
T d2bz2a1 74 ARKQP 78 (79)
T ss_dssp CCSSC
T ss_pred ecCCC
Confidence 98654
No 63
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.77 E-value=1.4e-18 Score=103.10 Aligned_cols=76 Identities=21% Similarity=0.467 Sum_probs=68.5
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeC-CeEEEEEe
Q 032111 31 QSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELN-GRNIRVSF 109 (147)
Q Consensus 31 ~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~-g~~l~v~~ 109 (147)
++.++|||+|||.++++++|+++|.+||.|..+.++.++ +++|||+|.+.++|++|+..|++..+. ++.|+|.|
T Consensus 6 pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~~-----~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~ 80 (83)
T d2b0ga1 6 PPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNR-----HDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITF 80 (83)
T ss_dssp SCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTTT-----CSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeeccc-----ceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEE
Confidence 345799999999999999999999999999999887542 579999999999999999999999984 68999999
Q ss_pred ec
Q 032111 110 AN 111 (147)
Q Consensus 110 ~~ 111 (147)
++
T Consensus 81 ak 82 (83)
T d2b0ga1 81 AK 82 (83)
T ss_dssp CC
T ss_pred ec
Confidence 86
No 64
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.77 E-value=2e-18 Score=100.53 Aligned_cols=74 Identities=18% Similarity=0.226 Sum_probs=67.3
Q ss_pred CeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 34 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 34 ~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
++|||+|||+++++++|+++|..+|.|..+.++.++.. .+++|||+|.+.++|++|+. +++..|.|++|.|+..
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~--~~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKK--NFRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTS--SSEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeeccc--cceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEEC
Confidence 48999999999999999999999999999999887543 34699999999999999996 8999999999999865
No 65
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=1.7e-18 Score=108.05 Aligned_cols=76 Identities=18% Similarity=0.201 Sum_probs=69.2
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeec
Q 032111 32 SQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFAN 111 (147)
Q Consensus 32 ~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~ 111 (147)
..++|||+|||+.+++++|+++|.+||.|..|.+.. .++||||+|.+.++|++||..||+..|.+++|.|+|+.
T Consensus 9 ~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~~------~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~ 82 (111)
T d1whxa_ 9 SKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPE------GGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAP 82 (111)
T ss_dssp EEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECCS------SSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHhhhhccCCccEEEeec------cCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECC
Confidence 347899999999999999999999999999987743 35799999999999999999999999999999999986
Q ss_pred CC
Q 032111 112 DR 113 (147)
Q Consensus 112 ~~ 113 (147)
..
T Consensus 83 ~~ 84 (111)
T d1whxa_ 83 IG 84 (111)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 66
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=8.8e-19 Score=108.10 Aligned_cols=82 Identities=12% Similarity=0.229 Sum_probs=72.4
Q ss_pred CCCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 032111 30 SQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSF 109 (147)
Q Consensus 30 ~~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~ 109 (147)
.....+|||+|||+++++++|+++|..+|.+..+.++....+++++|+|||+|.+.++|++||+ +++..|.|+.|.|.+
T Consensus 5 ~~~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~ 83 (103)
T d2cpya1 5 NSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHV 83 (103)
T ss_dssp CSCCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEE
T ss_pred CCCceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEE
Confidence 3445789999999999999999999999988765455555789999999999999999999997 899999999999998
Q ss_pred ecC
Q 032111 110 AND 112 (147)
Q Consensus 110 ~~~ 112 (147)
+..
T Consensus 84 ~~~ 86 (103)
T d2cpya1 84 VTL 86 (103)
T ss_dssp ECH
T ss_pred CCH
Confidence 753
No 67
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.7e-18 Score=104.46 Aligned_cols=80 Identities=28% Similarity=0.459 Sum_probs=70.5
Q ss_pred CCCeEEEcCCCCCCCHHHHHH----HhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEE
Q 032111 32 SQTKLFVGGLSWGTDDSSLKE----AFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRV 107 (147)
Q Consensus 32 ~~~~i~v~nlp~~~~~~~l~~----~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v 107 (147)
+.++|||+|||+.+++++|++ +|++||.|..|.+.. ++++++||||+|.+.++|.+|++.||+..+.|+.|.|
T Consensus 2 P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~---~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v 78 (91)
T d1nu4a_ 2 PNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSR---SLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRI 78 (91)
T ss_dssp CCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCH---HHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEee---eccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEE
Confidence 357999999999999998864 579999999887643 4567899999999999999999999999999999999
Q ss_pred EeecCCC
Q 032111 108 SFANDRP 114 (147)
Q Consensus 108 ~~~~~~~ 114 (147)
.+++++.
T Consensus 79 ~~ak~~~ 85 (91)
T d1nu4a_ 79 QYAKTDS 85 (91)
T ss_dssp EECSSCC
T ss_pred EEeCCCc
Confidence 9998653
No 68
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=1.3e-18 Score=104.36 Aligned_cols=77 Identities=25% Similarity=0.443 Sum_probs=67.8
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeec
Q 032111 32 SQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFAN 111 (147)
Q Consensus 32 ~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~ 111 (147)
..++|||+|||+++++++|+++|.+||.|..+.+.. .+++||||+|.+.++|++|+. ++..|.|++|.|+++.
T Consensus 4 ~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~~-----~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~ 76 (88)
T d1wf0a_ 4 GSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPK-----PFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNAE 76 (88)
T ss_dssp CCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECCS-----SCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEee-----ccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCC
Confidence 457999999999999999999999999999987643 346899999999999999986 7789999999999997
Q ss_pred CCCC
Q 032111 112 DRPP 115 (147)
Q Consensus 112 ~~~~ 115 (147)
++..
T Consensus 77 ~k~~ 80 (88)
T d1wf0a_ 77 PKHN 80 (88)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6543
No 69
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=2.6e-18 Score=106.93 Aligned_cols=75 Identities=24% Similarity=0.442 Sum_probs=69.0
Q ss_pred CeEEEcCCCC-CCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeecC
Q 032111 34 TKLFVGGLSW-GTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFAND 112 (147)
Q Consensus 34 ~~i~v~nlp~-~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~~ 112 (147)
++|||.|||+ .+++++|+++|+.||.|..+.+++++ +|+|||+|.+.++|++|++.|++..|.|+.|.|++++.
T Consensus 3 ~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~-----kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~ 77 (109)
T d2adca1 3 SVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNK-----KENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKH 77 (109)
T ss_dssp SEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTT-----SCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSC
T ss_pred CEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecc-----cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 6899999965 58999999999999999999998764 57999999999999999999999999999999999875
Q ss_pred C
Q 032111 113 R 113 (147)
Q Consensus 113 ~ 113 (147)
.
T Consensus 78 ~ 78 (109)
T d2adca1 78 Q 78 (109)
T ss_dssp C
T ss_pred C
Confidence 4
No 70
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=5.9e-18 Score=103.26 Aligned_cols=77 Identities=35% Similarity=0.634 Sum_probs=69.3
Q ss_pred CCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCC--eEEEEEe
Q 032111 32 SQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNG--RNIRVSF 109 (147)
Q Consensus 32 ~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g--~~l~v~~ 109 (147)
+.++|||+|||+++++++|+++|++||.|..+.+.++ +++|||+|.+.++|++|++.|++..|.+ ++|+|+|
T Consensus 16 Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~------~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ 89 (97)
T d1whya_ 16 PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKG------DSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDF 89 (97)
T ss_dssp CCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSS------SCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEE
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeecc------ccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEe
Confidence 4589999999999999999999999999999988654 4699999999999999999999999976 5799999
Q ss_pred ecCCC
Q 032111 110 ANDRP 114 (147)
Q Consensus 110 ~~~~~ 114 (147)
+++.+
T Consensus 90 ak~~~ 94 (97)
T d1whya_ 90 AKSGP 94 (97)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 88654
No 71
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=1.1e-18 Score=109.26 Aligned_cols=83 Identities=18% Similarity=0.312 Sum_probs=73.2
Q ss_pred CCCCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEE
Q 032111 29 MSQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVS 108 (147)
Q Consensus 29 ~~~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~ 108 (147)
+.....+|||+|||+.+++++|+++|..+|.+..+.++.+..++.++|+|||+|.+.++|++|+. ||+..|.++.|.|.
T Consensus 14 ~~~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~ 92 (112)
T d1wela1 14 PHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVH 92 (112)
T ss_dssp CCCCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEE
T ss_pred CCCCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEE
Confidence 34456799999999999999999999999988765566666789999999999999999999997 89999999999998
Q ss_pred eecC
Q 032111 109 FAND 112 (147)
Q Consensus 109 ~~~~ 112 (147)
.+..
T Consensus 93 ~~~~ 96 (112)
T d1wela1 93 PITK 96 (112)
T ss_dssp EECH
T ss_pred EcCh
Confidence 8753
No 72
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74 E-value=1.4e-17 Score=96.93 Aligned_cols=71 Identities=21% Similarity=0.368 Sum_probs=62.9
Q ss_pred EEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeecCC
Q 032111 36 LFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFANDR 113 (147)
Q Consensus 36 i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~~~ 113 (147)
|||+|||+++++++|+++|.+|| +..+.+ .+.+++|||+|.+.++|++|+..||+..+.|++|.|++++..
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~------~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d 71 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFV------DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTD 71 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEE------ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCST
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceee------cccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCC
Confidence 79999999999999999999998 444433 235689999999999999999999999999999999998653
No 73
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=8.2e-18 Score=104.53 Aligned_cols=80 Identities=21% Similarity=0.355 Sum_probs=70.5
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCee--CCeEEEEE
Q 032111 31 QSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQEL--NGRNIRVS 108 (147)
Q Consensus 31 ~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~--~g~~l~v~ 108 (147)
.+..+|||+|||+.+++++|+++|.+||.|..+.+..++ .+++|||+|.+.++|++||..|++..+ .+..|.|.
T Consensus 5 s~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~----~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~ 80 (108)
T d2adba1 5 SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKN----NQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRID 80 (108)
T ss_dssp CCEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEET----TEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEE
T ss_pred CCeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeC----CCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEE
Confidence 345689999999999999999999999999999888763 478999999999999999999999998 46788888
Q ss_pred eecCCC
Q 032111 109 FANDRP 114 (147)
Q Consensus 109 ~~~~~~ 114 (147)
+++...
T Consensus 81 ~s~~~~ 86 (108)
T d2adba1 81 FSKLTS 86 (108)
T ss_dssp ECSSCS
T ss_pred ecCCcc
Confidence 887543
No 74
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=3.1e-17 Score=98.22 Aligned_cols=79 Identities=14% Similarity=0.230 Sum_probs=70.0
Q ss_pred CCCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHh--cCCeeCCeEEEE
Q 032111 30 SQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAM--DGQELNGRNIRV 107 (147)
Q Consensus 30 ~~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l--~~~~~~g~~l~v 107 (147)
..+.++|||+|||+.+++++|+++|++||.|..+.+..+ +++|||+|.+.++|++|++.+ ++..+.|++|.|
T Consensus 5 ~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~------~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v 78 (88)
T d2cq1a1 5 GAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG------KNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYI 78 (88)
T ss_dssp SSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHhccccccccccccc------ceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEE
Confidence 345689999999999999999999999999999988755 369999999999999999865 567999999999
Q ss_pred EeecCCC
Q 032111 108 SFANDRP 114 (147)
Q Consensus 108 ~~~~~~~ 114 (147)
.+++.+.
T Consensus 79 ~~sk~~~ 85 (88)
T d2cq1a1 79 QYSNHKE 85 (88)
T ss_dssp EECSCSS
T ss_pred EECCCCC
Confidence 9998654
No 75
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73 E-value=6.2e-17 Score=99.83 Aligned_cols=80 Identities=16% Similarity=0.245 Sum_probs=70.1
Q ss_pred CCCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhc--CCeeCCeEEEE
Q 032111 30 SQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMD--GQELNGRNIRV 107 (147)
Q Consensus 30 ~~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~--~~~~~g~~l~v 107 (147)
..+..+|||.|||+.+++++|.++|.+||.|..+.+.++ +++|||+|.+.++|++|+..|+ ...+.+++|+|
T Consensus 12 ~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~------k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v 85 (104)
T d1wexa_ 12 VSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPF------KRQALVEFENIDSAKECVTFAADVPVYIAGQQAFF 85 (104)
T ss_dssp CCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEec------ceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEE
Confidence 345689999999999999999999999999999988754 4699999999999999999874 56788999999
Q ss_pred EeecCCCC
Q 032111 108 SFANDRPP 115 (147)
Q Consensus 108 ~~~~~~~~ 115 (147)
.+++..+.
T Consensus 86 ~~s~~~~~ 93 (104)
T d1wexa_ 86 NYSTSKRI 93 (104)
T ss_dssp EECSSSSC
T ss_pred EEcCCCcc
Confidence 99976543
No 76
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69 E-value=5.1e-17 Score=99.37 Aligned_cols=78 Identities=14% Similarity=0.264 Sum_probs=68.9
Q ss_pred CCCCCeEEEcCCCCC-CCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHH--HhcCCeeCCeEEE
Q 032111 30 SQSQTKLFVGGLSWG-TDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQS--AMDGQELNGRNIR 106 (147)
Q Consensus 30 ~~~~~~i~v~nlp~~-~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~--~l~~~~~~g~~l~ 106 (147)
....++|||+|||.+ +++++|.++|++||.|..+.++.+ +++|||+|.+.++|.+|++ .+++..+.|+.|.
T Consensus 15 ~~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~------k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~ 88 (99)
T d1x4fa1 15 QELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM------KSQAFIEMETREDAMAMVDHCLKKALWFQGRCVK 88 (99)
T ss_dssp SCCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETT------TTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCE
T ss_pred CCCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeec------CCcEEEEecchHHHHHHHHHHhcCCceECCEEEE
Confidence 345689999999986 899999999999999999988765 4699999999999999998 4678899999999
Q ss_pred EEeecCC
Q 032111 107 VSFANDR 113 (147)
Q Consensus 107 v~~~~~~ 113 (147)
|.+++.+
T Consensus 89 V~~s~~~ 95 (99)
T d1x4fa1 89 VDLSEKY 95 (99)
T ss_dssp EEEECSC
T ss_pred EEEcCCc
Confidence 9999754
No 77
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=2.8e-16 Score=105.62 Aligned_cols=85 Identities=33% Similarity=0.587 Sum_probs=77.7
Q ss_pred CCCCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEE
Q 032111 29 MSQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVS 108 (147)
Q Consensus 29 ~~~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~ 108 (147)
.....++|||+|||+.+++++|+++|..||.|..+.++.+..++.++|||||+|.+.++|++|++ +++..+.|+.|.|.
T Consensus 93 ~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~G~~i~V~ 171 (183)
T d1u1qa_ 93 AHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVR 171 (183)
T ss_dssp TTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEETTEEEEEE
T ss_pred cccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeECCEEEEEE
Confidence 34456799999999999999999999999999999999998889999999999999999999998 78889999999999
Q ss_pred eecCCC
Q 032111 109 FANDRP 114 (147)
Q Consensus 109 ~~~~~~ 114 (147)
++.++.
T Consensus 172 ~A~~k~ 177 (183)
T d1u1qa_ 172 KALSKQ 177 (183)
T ss_dssp ECCCHH
T ss_pred ecCCcc
Confidence 987643
No 78
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.67 E-value=2e-16 Score=94.88 Aligned_cols=77 Identities=16% Similarity=0.254 Sum_probs=68.2
Q ss_pred CCCCeEEEcCCCCC-CCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHh--cCCeeCCeEEEE
Q 032111 31 QSQTKLFVGGLSWG-TDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAM--DGQELNGRNIRV 107 (147)
Q Consensus 31 ~~~~~i~v~nlp~~-~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l--~~~~~~g~~l~v 107 (147)
...++|||+|||.. +++++|.++|++||.|..+.+..++ ++|||+|.+.++|..|+..| ++..+.|++|+|
T Consensus 6 ~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~k------~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V 79 (89)
T d1x4da1 6 ETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNKI------NEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRV 79 (89)
T ss_dssp CCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSSS------SCEEEEESSHHHHHHHHHHHHHSCCEETTEECEE
T ss_pred CCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeeccc------eEEEEEEcchhhHHHHHHHHhhCCCccCCceEEE
Confidence 45688999999986 7899999999999999999887653 48999999999999999966 577899999999
Q ss_pred EeecCC
Q 032111 108 SFANDR 113 (147)
Q Consensus 108 ~~~~~~ 113 (147)
.++++.
T Consensus 80 ~~s~~~ 85 (89)
T d1x4da1 80 HLSQKY 85 (89)
T ss_dssp EEECCC
T ss_pred EECCCc
Confidence 999854
No 79
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=9.2e-19 Score=105.47 Aligned_cols=79 Identities=16% Similarity=0.438 Sum_probs=67.1
Q ss_pred CeEEEcCCCCCCCHHHHHHHhhccCCeeEEEE-----EecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEE
Q 032111 34 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKV-----ITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVS 108 (147)
Q Consensus 34 ~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~-----~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~ 108 (147)
++|||+|||+++++++|+++|..+|.+..+.+ ..+..++++++||||+|.+.++|++|++ |++..+.|+.|+|+
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEEC
Confidence 68999999999999999999999987655433 2344567788999999999999999996 99999999999997
Q ss_pred eecCC
Q 032111 109 FANDR 113 (147)
Q Consensus 109 ~~~~~ 113 (147)
+++..
T Consensus 81 r~k~~ 85 (90)
T d1u2fa_ 81 RPHDY 85 (90)
T ss_dssp CTTCC
T ss_pred CCCCC
Confidence 65543
No 80
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.64 E-value=8.6e-16 Score=94.54 Aligned_cols=78 Identities=13% Similarity=0.160 Sum_probs=68.1
Q ss_pred CCCeEEEcCCCCCC-CH----HHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEE
Q 032111 32 SQTKLFVGGLSWGT-DD----SSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIR 106 (147)
Q Consensus 32 ~~~~i~v~nlp~~~-~~----~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~ 106 (147)
...+|||+||+.++ ++ ++|+++|..||.|..+.+.+. +++|||+|.+.++|.+|+..||+..|.|++|+
T Consensus 4 ~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k~------~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~ 77 (104)
T d1weya_ 4 GSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFKS------FKRVRINFSNPLSAADARLRLHKTEFLGKEMK 77 (104)
T ss_dssp CCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEETT------TTEEEEECSSTTHHHHHHHTSTTSEETTEECE
T ss_pred CCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEecC------CCEEEEEECCHHHHHHHHHHhcccccCCCEeE
Confidence 45789999999876 33 468999999999999988753 46999999999999999999999999999999
Q ss_pred EEeecCCCC
Q 032111 107 VSFANDRPP 115 (147)
Q Consensus 107 v~~~~~~~~ 115 (147)
|.+++....
T Consensus 78 v~~a~~~~~ 86 (104)
T d1weya_ 78 LYFAQTLHI 86 (104)
T ss_dssp EECCCCSSC
T ss_pred EeecccCCC
Confidence 999976544
No 81
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=2.4e-16 Score=97.05 Aligned_cols=75 Identities=16% Similarity=0.214 Sum_probs=68.7
Q ss_pred eEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEee
Q 032111 35 KLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 110 (147)
Q Consensus 35 ~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~ 110 (147)
.++|.+++.++++++|+++|++||.|..|.++++ .+++++|++||+|.+.++|.+|+..||+..+.|++|.|+++
T Consensus 29 ~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~-~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 29 DVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDN-LGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCS-SSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred hHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecC-CCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 4667788888899999999999999999998766 57899999999999999999999999999999999999875
No 82
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=4.4e-14 Score=94.64 Aligned_cols=80 Identities=38% Similarity=0.677 Sum_probs=72.4
Q ss_pred CeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeecCC
Q 032111 34 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFANDR 113 (147)
Q Consensus 34 ~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~~~ 113 (147)
++|||+|||+++++++|+++|++||.|..+.++.+..++.++++|||+|.+.++|++|+. +++..+..+.+.+......
T Consensus 7 r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~-~~~~~~~~~~~~~~~~~~~ 85 (183)
T d1u1qa_ 7 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAVSR 85 (183)
T ss_dssp HEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECCCT
T ss_pred CEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHH-hcCCcccccchhhhhhhhc
Confidence 689999999999999999999999999999999998899999999999999999999999 5667888888888776544
Q ss_pred C
Q 032111 114 P 114 (147)
Q Consensus 114 ~ 114 (147)
.
T Consensus 86 ~ 86 (183)
T d1u1qa_ 86 E 86 (183)
T ss_dssp T
T ss_pred c
Confidence 3
No 83
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=2.5e-14 Score=87.41 Aligned_cols=67 Identities=19% Similarity=0.354 Sum_probs=59.2
Q ss_pred hCCCCCCeEEEcC--CCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCee
Q 032111 28 FMSQSQTKLFVGG--LSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQEL 100 (147)
Q Consensus 28 ~~~~~~~~i~v~n--lp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~ 100 (147)
..+.+..+++|.| ||..+++++|+++|++||.|..+.++.+ ++||||+|.+.++|++|+..||+..+
T Consensus 13 ~~~~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~------k~~aFV~f~~~e~A~~A~~~lng~~i 81 (101)
T d2cq2a1 13 TVSYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPN------KPYSFARYRTTEESKRAYVTLNGKEV 81 (101)
T ss_dssp CCSSCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTT------CSCEEEEESSHHHHHHHHHHTTTCEE
T ss_pred cCCCCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccC------ccEEEEEECCHHHHHHHHHHhCCCCC
Confidence 3455667889965 9999999999999999999999887654 46999999999999999999999987
No 84
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=3.6e-14 Score=88.39 Aligned_cols=72 Identities=22% Similarity=0.264 Sum_probs=62.2
Q ss_pred CeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCH-HHHHHHHHHhcCCeeCCeEEEEEeec
Q 032111 34 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSN-ESASSAQSAMDGQELNGRNIRVSFAN 111 (147)
Q Consensus 34 ~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~-~~a~~ai~~l~~~~~~g~~l~v~~~~ 111 (147)
-.+||+|||+.+|+++|+++|.+||.|..|.++.+ +++|||.|.+. ++|..|+..+++..+.++.+.|.+..
T Consensus 12 ~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~------kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~ 84 (113)
T d1owxa_ 12 LLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRG------AKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEV 84 (113)
T ss_dssp EEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTT------CSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEE
T ss_pred eEEEECCCCCCCCHHHHHHHHHhcCChheEEEecC------CceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEee
Confidence 35699999999999999999999999999998754 57999999985 78999999999998877776666654
No 85
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=3.2e-13 Score=82.12 Aligned_cols=79 Identities=18% Similarity=0.308 Sum_probs=66.2
Q ss_pred CCCeEEEcCC--CCCC---------CHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCee
Q 032111 32 SQTKLFVGGL--SWGT---------DDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQEL 100 (147)
Q Consensus 32 ~~~~i~v~nl--p~~~---------~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~ 100 (147)
..++|+|.|| |.++ ..++|++.|++||.|..+.+..+ ..+|++||+|.+.++|.+|+..||+..+
T Consensus 7 ~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~----~~~G~~fV~f~~~e~A~~A~~~lng~~~ 82 (99)
T d2dita1 7 HERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDR----HPDGVASVSFRDPEEADYCIQTLDGRWF 82 (99)
T ss_dssp SCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETT----CTTCEEEEECSCHHHHHHHHHHSTTCEE
T ss_pred CccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCC----CCccEEEEEECCHHHHHHHHHHhCCcEE
Confidence 4578999998 5432 12578888999999999987654 3468999999999999999999999999
Q ss_pred CCeEEEEEeecCCC
Q 032111 101 NGRNIRVSFANDRP 114 (147)
Q Consensus 101 ~g~~l~v~~~~~~~ 114 (147)
.|++|.|.+..++.
T Consensus 83 ~gr~i~v~~~~g~~ 96 (99)
T d2dita1 83 GGRQITAQAWDGTT 96 (99)
T ss_dssp TTEECEEEECCSCC
T ss_pred CCEEEEEEEeCCcC
Confidence 99999999987654
No 86
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.38 E-value=6.1e-13 Score=77.85 Aligned_cols=72 Identities=24% Similarity=0.265 Sum_probs=59.8
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeE-EEEEeec
Q 032111 33 QTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRN-IRVSFAN 111 (147)
Q Consensus 33 ~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~-l~v~~~~ 111 (147)
.+.|+|.++|++++++.| +.|.+||.|.++.+..+ ++|+||+|.+.++|++||+ +|+..+.|+. |.|..+.
T Consensus 4 ~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~~~~------~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~~ 75 (81)
T d1wwha1 4 DTWVTVFGFPQASASYIL-LQFAQYGNILKHVMSNT------GNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPCI 75 (81)
T ss_dssp GGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEECSS------SSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEECC
T ss_pred ccEEEEECCChHHHHHHH-HHHHhhhhhheEEecCC------CCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeCC
Confidence 467999999999886544 67999999999877543 5799999999999999997 8999999974 5677664
Q ss_pred C
Q 032111 112 D 112 (147)
Q Consensus 112 ~ 112 (147)
.
T Consensus 76 ~ 76 (81)
T d1wwha1 76 D 76 (81)
T ss_dssp C
T ss_pred C
Confidence 3
No 87
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=5.7e-13 Score=81.66 Aligned_cols=80 Identities=13% Similarity=0.196 Sum_probs=66.4
Q ss_pred CCCeEEEcCC--CCCCC--------HHHHHHHhhccCCeeEEEEEecCCCC--ccceEEEEEeCCHHHHHHHHHHhcCCe
Q 032111 32 SQTKLFVGGL--SWGTD--------DSSLKEAFSNFGDITEAKVITERESG--KSRGFGFVTYDSNESASSAQSAMDGQE 99 (147)
Q Consensus 32 ~~~~i~v~nl--p~~~~--------~~~l~~~f~~~g~i~~~~~~~~~~~~--~~~g~afv~f~~~~~a~~ai~~l~~~~ 99 (147)
+++.|.|.|| |.++. .++|++.|.+||.|..+.++++..+. ...|++||+|.+.++|.+|+..||+..
T Consensus 3 Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~ 82 (104)
T d1o0pa_ 3 PTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRK 82 (104)
T ss_dssp CCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCCE
Confidence 4578889998 44432 24688899999999999988764432 345899999999999999999999999
Q ss_pred eCCeEEEEEeec
Q 032111 100 LNGRNIRVSFAN 111 (147)
Q Consensus 100 ~~g~~l~v~~~~ 111 (147)
++|+.|.+.+..
T Consensus 83 f~gR~v~v~f~~ 94 (104)
T d1o0pa_ 83 FANRVVVTKYCD 94 (104)
T ss_dssp SSSSCCEEEEEC
T ss_pred ECCeEEEEEEcC
Confidence 999999999875
No 88
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.83 E-value=3.9e-05 Score=44.21 Aligned_cols=55 Identities=24% Similarity=0.431 Sum_probs=48.4
Q ss_pred HHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeec
Q 032111 48 SSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFAN 111 (147)
Q Consensus 48 ~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~ 111 (147)
.+|.+.|.+||.|.-+++..+ --+|+|.+-+.|.+|++ +++.++.|+.|+|....
T Consensus 39 ~~Llq~l~~~GeViLvRFv~d--------~mwVTF~dG~SAL~al~-l~g~~v~G~~l~It~~~ 93 (95)
T d1ufwa_ 39 TELMQTLGSYGTIVLVRINQG--------QMLVTFADSHSALSVLD-VDGMKVKGRAVKISGPS 93 (95)
T ss_dssp HHHHHHHHHHSCCSEEEEETT--------EEEEECSCSHHHHHHHH-GGGSEETTEEEEEECCC
T ss_pred HHHHHHHhhCCeEEEEEEeCC--------eEEEEECCcHHHHHHhc-cCCeEEcceEEEEecCC
Confidence 367778899999998888876 58999999999999999 89999999999998654
No 89
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.82 E-value=0.0001 Score=40.34 Aligned_cols=62 Identities=19% Similarity=0.292 Sum_probs=51.2
Q ss_pred HHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhcCCeeCCeEEEEEeecC
Q 032111 48 SSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFAND 112 (147)
Q Consensus 48 ~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~~~~~~g~~l~v~~~~~ 112 (147)
+.|.+.|.+++.|.++.+.... .....|-|...+.++|.-|+..||..+++.++|.|.++..
T Consensus 11 q~L~~~f~~h~~V~sv~l~~~~---dg~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~~ 72 (73)
T d2dgxa1 11 QLLQEAFARHGKVKSVELSPHT---DYQLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLATG 72 (73)
T ss_dssp HHHHHHHHHHSCEEEEEECSCC---STTCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred HHHHHHHHhheeEEEEEEEecc---CCcEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEecC
Confidence 3456678899999998775432 2234799999999999999999999999999999998764
No 90
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.79 E-value=0.00013 Score=42.31 Aligned_cols=69 Identities=12% Similarity=0.146 Sum_probs=57.0
Q ss_pred CeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCcc--ceEEEEEeCCHHHHHHHHHHhcCCeeCC
Q 032111 34 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKS--RGFGFVTYDSNESASSAQSAMDGQELNG 102 (147)
Q Consensus 34 ~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~--~g~afv~f~~~~~a~~ai~~l~~~~~~g 102 (147)
+.|-|+.||+..+++++.+.+...+.+........+.+.+. ..-|+|.|.+.++.....+.+++..+.+
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D 72 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLD 72 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEEC
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEc
Confidence 46889999999999999999998888777777665444332 2679999999999999999999998843
No 91
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.79 E-value=0.0034 Score=36.44 Aligned_cols=60 Identities=20% Similarity=0.276 Sum_probs=48.9
Q ss_pred CCCCCCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhc
Q 032111 29 MSQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMD 96 (147)
Q Consensus 29 ~~~~~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~ 96 (147)
+.+.+..||....|.++...+|.++|..||.| .|.++.+. .|||...+.+.++.++..+.
T Consensus 11 ~~p~RdHVf~~tFP~~Wk~~dI~~lFSpfG~V-~VswIddT-------Sa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 11 LQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNI-QISWIDDT-------SAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCCCCCSEEEEECCTTCCHHHHHHHHTTTCSC-CCEEEETT-------EEEEECSCHHHHHHHHHHHH
T ss_pred CCCCcceeEEEeCCcccchhHHHHHhcCCCce-EEEEecCc-------eEEEEecCHHHHHHHHHHhc
Confidence 44566789999999999999999999999875 34455442 69999999999999888655
No 92
>d2od6a1 d.58.4.22 (A:1-109) Hypothetical protein GOS_2359375 {environmental samples}
Probab=62.24 E-value=11 Score=21.40 Aligned_cols=48 Identities=8% Similarity=-0.044 Sum_probs=35.0
Q ss_pred HHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhc
Q 032111 49 SLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMD 96 (147)
Q Consensus 49 ~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~ 96 (147)
.+.+.|.+.|.+......-....++.+-..+.+|.+.++.+++...+.
T Consensus 33 ~~~~~Lk~~Gl~r~~~~~iwNk~~~fr~~~i~EYkd~~Afk~Cq~i~~ 80 (109)
T d2od6a1 33 VWVKEMKSRGLLKFSMNRVWNKGEVFRVVMTYEYKDRASFEANIAYLE 80 (109)
T ss_dssp HHHHHHHTTTEEEEEEEEECSSSSCEEEEEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCceEEEEEEeCCCCcEEEEEEEEECCHHHHHHHHHHHH
Confidence 445566777876665444444567888899999999999999888664
No 93
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus pneumoniae, Ermam [TaxId: 1313]}
Probab=39.01 E-value=26 Score=22.63 Aligned_cols=33 Identities=15% Similarity=0.223 Sum_probs=23.3
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEE
Q 032111 33 QTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVI 66 (147)
Q Consensus 33 ~~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~ 66 (147)
.....|+|||+.++..-|..++... .+..+.++
T Consensus 93 ~~~~vv~NLPY~Ist~il~~~l~~~-~~~~~v~m 125 (245)
T d1yuba_ 93 QRYKIVGNIPYHLSTQIIKKVVFES-RASDIYLI 125 (245)
T ss_dssp SEEEEEEECCSSSCHHHHHHHHHHC-CCEEEEEE
T ss_pred eeeeEeeeeehhhhHHHHHHHhhhc-hhhhhhhh
Confidence 3456899999999999998887653 33343333
No 94
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]}
Probab=36.25 E-value=19 Score=23.45 Aligned_cols=32 Identities=16% Similarity=0.226 Sum_probs=22.8
Q ss_pred CeEEEcCCCCCCCHHHHHHHhhccCCeeEEEE
Q 032111 34 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKV 65 (147)
Q Consensus 34 ~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~ 65 (147)
....|+|||++++..-|..++.....+..+.+
T Consensus 91 ~~~vvgNlPY~Iss~Il~~l~~~~~~~~~~~~ 122 (252)
T d1qyra_ 91 PLRVFGNLPYNISTPLMFHLFSYTDAIADMHF 122 (252)
T ss_dssp CEEEEEECCTTTHHHHHHHHHTTGGGEEEEEE
T ss_pred CeEEEecchHHHHHHHHHHhcccccceehhhh
Confidence 35668999999999888887765544544433
No 95
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.22 E-value=12 Score=24.91 Aligned_cols=33 Identities=9% Similarity=-0.011 Sum_probs=23.5
Q ss_pred CeEEEcCCCCCCCHHHHHHHhhccCCeeEEEEE
Q 032111 34 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVI 66 (147)
Q Consensus 34 ~~i~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~ 66 (147)
....|+|||+.++..-|..++...-.+..+.++
T Consensus 87 ~~~vV~NLPY~Iss~il~~~~~~~~~~~~~v~m 119 (278)
T d1zq9a1 87 FDTCVANLPYQISSPFVFKLLLHRPFFRCAILM 119 (278)
T ss_dssp CSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEE
T ss_pred hhhhhcchHHHHHHHHHHHHHhhCCccceeeEe
Confidence 456799999999988888877655445444333
No 96
>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]}
Probab=26.74 E-value=26 Score=22.51 Aligned_cols=23 Identities=4% Similarity=0.250 Sum_probs=18.9
Q ss_pred CeEEEcCCCCCCCHHHHHHHhhc
Q 032111 34 TKLFVGGLSWGTDDSSLKEAFSN 56 (147)
Q Consensus 34 ~~i~v~nlp~~~~~~~l~~~f~~ 56 (147)
....|+|||++++..-|..++..
T Consensus 86 ~~~vv~NLPYnIss~il~~ll~~ 108 (235)
T d1qama_ 86 SYKIFGNIPYNISTDIIRKIVFD 108 (235)
T ss_dssp CCEEEEECCGGGHHHHHHHHHHS
T ss_pred cceeeeeehhhhhHHHHHHHHhh
Confidence 44568999999999988888754
No 97
>d2op5a1 d.58.4.22 (A:4-115) Hypothetical protein GOS_7213774 {environmental samples}
Probab=25.76 E-value=54 Score=18.33 Aligned_cols=46 Identities=22% Similarity=0.134 Sum_probs=31.0
Q ss_pred HHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHh
Q 032111 49 SLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAM 95 (147)
Q Consensus 49 ~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l 95 (147)
.+...|.+.|.+..+...-....+ .+-....+|.+.++.+++...+
T Consensus 34 ~~~~~Lk~~Gl~R~~~~riWNke~-frl~~ifEYkd~eAfk~Cq~i~ 79 (112)
T d2op5a1 34 DLYSRLSAAGLIRHVISKVWNKEQ-HRISMVFEYDSKEGYQKCQEII 79 (112)
T ss_dssp HHHHHHHHHTEEEEEEEEECCTTC-CEEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcceEEEEEECCCC-eEEEEEEEECCHHHHHHHHHHH
Confidence 355667777876655332222334 7777889999999999988755
No 98
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=24.10 E-value=58 Score=18.17 Aligned_cols=39 Identities=13% Similarity=0.276 Sum_probs=26.7
Q ss_pred HHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhc
Q 032111 49 SLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMD 96 (147)
Q Consensus 49 ~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~ 96 (147)
++++.+..+|.. . +. .+| ..+|..|.+.++|+++.+.+.
T Consensus 61 ~~~~~L~~~g~~---~-MS--GSG---stvF~~f~~~~~a~~~~~~l~ 99 (120)
T d1oj4a2 61 AVLSWLLEYAPS---R-LT--GTG---ACVFAEFDTESEARQVLEQAP 99 (120)
T ss_dssp HHHHHHTTTSCE---E-EC--TTS---SCEEEEESSHHHHHHHHHHSC
T ss_pred HHHHHHhhcccc---e-ec--CCC---CEEEEEeCCHHHHHHHHHHcC
Confidence 455556667642 2 22 222 358999999999999999875
No 99
>d1t15a2 c.15.1.3 (A:1758-1859) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.67 E-value=48 Score=17.31 Aligned_cols=27 Identities=11% Similarity=-0.026 Sum_probs=21.4
Q ss_pred CCeEEEcCCCCCCCHHHHHHHhhccCC
Q 032111 33 QTKLFVGGLSWGTDDSSLKEAFSNFGD 59 (147)
Q Consensus 33 ~~~i~v~nlp~~~~~~~l~~~f~~~g~ 59 (147)
+..+++.+.....+.++|+.+...+|.
T Consensus 6 g~~i~~~g~~~~~~~~~L~~li~~~GG 32 (102)
T d1t15a2 6 GLEICCYGPFTNMPTDQLEWMVQLCGA 32 (102)
T ss_dssp TCEEEECSCCSSSCHHHHHHHHHHTTC
T ss_pred CcEEEEeCCCCCcCHHHHHHHHHHhCC
Confidence 468888875456778999999998885
No 100
>d2prda_ b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus thermophilus [TaxId: 274]}
Probab=22.49 E-value=48 Score=20.22 Aligned_cols=41 Identities=10% Similarity=0.174 Sum_probs=28.1
Q ss_pred HHHHHHHhhccCCeeEEEEEecCCCCccceEEEEEeCCHHHHHHHHHHhc
Q 032111 47 DSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMD 96 (147)
Q Consensus 47 ~~~l~~~f~~~g~i~~~~~~~~~~~~~~~g~afv~f~~~~~a~~ai~~l~ 96 (147)
-+.|+.+|..|-.+. ..+.+.+.+-.|.+.++|.+.|+..+
T Consensus 129 l~~I~~fF~~YK~le---------~k~~k~v~~~g~~d~~~A~~iI~~~~ 169 (174)
T d2prda_ 129 KQEIQHFFETYKALE---------AKKGKWVKVTGWRDRKAALEEVRACI 169 (174)
T ss_dssp HHHHHHHHHHTTGGG---------GGGTCCEEEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCc---------CCCCCEEEEccccCHHHHHHHHHHHH
Confidence 367889999985331 11223467778999999999887543
Done!