BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032116
(147 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0J709|UP12_ORYSJ Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic OS=Oryza
sativa subsp. japonica GN=Os08g0242700 PE=2 SV=2
Length = 283
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/93 (78%), Positives = 81/93 (87%), Gaps = 1/93 (1%)
Query: 51 RFSSSATRIIPRASSATAVEDGSNGDTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALL 110
R SS A R+ PRA+S+ AVEDGS+ +TDT+PTPKVIID DSDPDATIVEIT GDRLG LL
Sbjct: 46 RLSSPAVRV-PRAASSAAVEDGSSSNTDTVPTPKVIIDQDSDPDATIVEITLGDRLGDLL 104
Query: 111 DTMNALKNLGLNVVKANVFLDSSGKHNKFAITK 143
DTMNALKNLGLNVVKA+V LDS+GKH K AITK
Sbjct: 105 DTMNALKNLGLNVVKASVCLDSTGKHIKLAITK 137
>sp|P83643|UP12_ORYSI Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic OS=Oryza
sativa subsp. indica GN=OsI_027381 PE=1 SV=2
Length = 283
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/93 (78%), Positives = 81/93 (87%), Gaps = 1/93 (1%)
Query: 51 RFSSSATRIIPRASSATAVEDGSNGDTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALL 110
R SS A R+ PRA+S+ AVEDGS+ +TDT+PTPKVIID DSDPDATIVEIT GDRLG LL
Sbjct: 46 RLSSPAVRV-PRAASSAAVEDGSSSNTDTVPTPKVIIDQDSDPDATIVEITLGDRLGDLL 104
Query: 111 DTMNALKNLGLNVVKANVFLDSSGKHNKFAITK 143
DTMNALKNLGLNVVKA+V LDS+GKH K AITK
Sbjct: 105 DTMNALKNLGLNVVKASVCLDSTGKHIKLAITK 137
>sp|Q8RQD1|GLND_AZOBR [Protein-PII] uridylyltransferase OS=Azospirillum brasilense
GN=glnD PE=3 SV=1
Length = 933
Score = 35.8 bits (81), Expect = 0.099, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 83 PKVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANV 128
P+V+ID ++ T++E+ DR G L D AL NL L + A +
Sbjct: 845 PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKI 890
>sp|B6I6P2|NCPP_ECOSE Non-canonical purine NTP phosphatase OS=Escherichia coli (strain
SE11) GN=yjjX PE=3 SV=1
Length = 170
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 31/155 (20%)
Query: 11 ISTFFFLFSFHSAHFLRHSLLSDLGSPRFGNKPLCCPARRRFSSSATRIIPRASSATAVE 70
+ F +F S H ++ S + FG++ AR R ++ A R++P A A+E
Sbjct: 18 LQAFHEIFGEGSCHIASVAVESGVPEQPFGSEETRAGARNRVAN-ARRLLPEADFWVAIE 76
Query: 71 DGSNGDTD------------------TIPTPKVIIDLDSDPDATIVEITFGDRLGALLDT 112
G +GD+ T+P P VI++ ++ G+ LG ++
Sbjct: 77 AGIDGDSTFSWVVIENASQRGEARSATLPLPAVILE----------KVREGEALGPVMSR 126
Query: 113 MNALKNLGLNVVKANVFLDSSGKHNKFAITKAYVL 147
+ +G VF ++GK + ++ V+
Sbjct: 127 YTGIDEIGRKEGAIGVF--TAGKLTRASVYHQAVI 159
>sp|P39411|NCPP_ECOLI Non-canonical purine NTP phosphatase OS=Escherichia coli (strain
K12) GN=yjjX PE=1 SV=2
Length = 170
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 31/155 (20%)
Query: 11 ISTFFFLFSFHSAHFLRHSLLSDLGSPRFGNKPLCCPARRRFSSSATRIIPRASSATAVE 70
+ F +F S H ++ S + FG++ AR R ++ A R++P A A+E
Sbjct: 18 LQAFHEIFGEGSCHIASVAVESGVPEQPFGSEETRAGARNRVAN-ARRLLPEADFWVAIE 76
Query: 71 DGSNGDTD------------------TIPTPKVIIDLDSDPDATIVEITFGDRLGALLDT 112
G +GD+ T+P P VI++ ++ G+ LG ++
Sbjct: 77 AGIDGDSTFSWVVIENASQRGEARSATLPLPAVILE----------KVREGEALGPVMSR 126
Query: 113 MNALKNLGLNVVKANVFLDSSGKHNKFAITKAYVL 147
+ +G VF ++GK + ++ V+
Sbjct: 127 YTGIDEIGRKEGAIGVF--TAGKLTRASVYHQAVI 159
>sp|B1XFK4|NCPP_ECODH Non-canonical purine NTP phosphatase OS=Escherichia coli (strain
K12 / DH10B) GN=yjjX PE=3 SV=1
Length = 170
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 31/155 (20%)
Query: 11 ISTFFFLFSFHSAHFLRHSLLSDLGSPRFGNKPLCCPARRRFSSSATRIIPRASSATAVE 70
+ F +F S H ++ S + FG++ AR R ++ A R++P A A+E
Sbjct: 18 LQAFHEIFGEGSCHIASVAVESGVPEQPFGSEETRAGARNRVAN-ARRLLPEADFWVAIE 76
Query: 71 DGSNGDTD------------------TIPTPKVIIDLDSDPDATIVEITFGDRLGALLDT 112
G +GD+ T+P P VI++ ++ G+ LG ++
Sbjct: 77 AGIDGDSTFSWVVIENASQRGEARSATLPLPAVILE----------KVREGEALGPVMSR 126
Query: 113 MNALKNLGLNVVKANVFLDSSGKHNKFAITKAYVL 147
+ +G VF ++GK + ++ V+
Sbjct: 127 YTGIDEIGRKEGAIGVF--TAGKLTRASVYHQAVI 159
>sp|C4ZT76|NCPP_ECOBW Non-canonical purine NTP phosphatase OS=Escherichia coli (strain
K12 / MC4100 / BW2952) GN=yjjX PE=3 SV=1
Length = 170
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 31/155 (20%)
Query: 11 ISTFFFLFSFHSAHFLRHSLLSDLGSPRFGNKPLCCPARRRFSSSATRIIPRASSATAVE 70
+ F +F S H ++ S + FG++ AR R ++ A R++P A A+E
Sbjct: 18 LQAFHEIFGEGSCHIASVAVESGVPEQPFGSEETRAGARNRVAN-ARRLLPEADFWVAIE 76
Query: 71 DGSNGDTD------------------TIPTPKVIIDLDSDPDATIVEITFGDRLGALLDT 112
G +GD+ T+P P VI++ ++ G+ LG ++
Sbjct: 77 AGIDGDSTFSWVVIENASQRGEARSATLPLPAVILE----------KVREGEALGPVMSR 126
Query: 113 MNALKNLGLNVVKANVFLDSSGKHNKFAITKAYVL 147
+ +G VF ++GK + ++ V+
Sbjct: 127 YTGIDEIGRKEGAIGVF--TAGKLTRASVYHQAVI 159
>sp|B7LEP0|NCPP_ECO55 Non-canonical purine NTP phosphatase OS=Escherichia coli (strain
55989 / EAEC) GN=yjjX PE=3 SV=1
Length = 170
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 31/155 (20%)
Query: 11 ISTFFFLFSFHSAHFLRHSLLSDLGSPRFGNKPLCCPARRRFSSSATRIIPRASSATAVE 70
+ F +F S H ++ S + FG++ AR R ++ A R++P A A+E
Sbjct: 18 LQAFHEIFGEGSCHIASVAVESGVPEQPFGSEETRAGARNRVAN-ARRLLPEADFWVAIE 76
Query: 71 DGSNGDTD------------------TIPTPKVIIDLDSDPDATIVEITFGDRLGALLDT 112
G +GD+ T+P P VI++ ++ G+ LG ++
Sbjct: 77 AGIDGDSTFSWVVIENASQRGEARSATLPLPAVILE----------KVREGEALGPVMSR 126
Query: 113 MNALKNLGLNVVKANVFLDSSGKHNKFAITKAYVL 147
+ +G VF ++GK + ++ V+
Sbjct: 127 YTGIDEIGRKEGAIGVF--TAGKLTRASVYHQAVI 159
>sp|Q8FA41|NCPP_ECOL6 Non-canonical purine NTP phosphatase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=yjjX PE=3 SV=2
Length = 175
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 31/155 (20%)
Query: 11 ISTFFFLFSFHSAHFLRHSLLSDLGSPRFGNKPLCCPARRRFSSSATRIIPRASSATAVE 70
+ F +F S H ++ S + FG++ AR R ++ A R++P A A+E
Sbjct: 18 LQAFHEIFGEGSCHIASVAVESGVPEQPFGSEETRAGARNRVAN-ARRLLPEADFWVAIE 76
Query: 71 DGSNGDTD------------------TIPTPKVIIDLDSDPDATIVEITFGDRLGALLDT 112
G +GD+ T+P P VI++ ++ G+ LG ++
Sbjct: 77 AGIDGDSTFSWVVIENTSQRGEARSATLPLPAVILE----------KVREGEALGPVMSR 126
Query: 113 MNALKNLGLNVVKANVFLDSSGKHNKFAITKAYVL 147
+ +G VF ++GK + ++ V+
Sbjct: 127 YTGIDEIGRKEGAIGVF--TAGKLTRTSVYHQAVI 159
>sp|B7MNK3|NCPP_ECO45 Non-canonical purine NTP phosphatase OS=Escherichia coli O45:K1
(strain S88 / ExPEC) GN=yjjX PE=3 SV=1
Length = 175
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 31/155 (20%)
Query: 11 ISTFFFLFSFHSAHFLRHSLLSDLGSPRFGNKPLCCPARRRFSSSATRIIPRASSATAVE 70
+ F +F S H ++ S + FG++ AR R ++ A R++P A A+E
Sbjct: 18 LQAFHEIFGEGSCHIASVAVESGVPEQPFGSEETRAGARNRVAN-ARRLLPEADFWVAIE 76
Query: 71 DGSNGDTD------------------TIPTPKVIIDLDSDPDATIVEITFGDRLGALLDT 112
G +GD+ T+P P VI++ ++ G+ LG ++
Sbjct: 77 AGIDGDSTFSWVVIENTSQRGEARSATLPLPAVILE----------KVREGEALGPVMSR 126
Query: 113 MNALKNLGLNVVKANVFLDSSGKHNKFAITKAYVL 147
+ +G VF ++GK + ++ V+
Sbjct: 127 YTGIDEIGRKEGAIGVF--TAGKLTRTSVYHQAVI 159
>sp|B7UR24|NCPP_ECO27 Non-canonical purine NTP phosphatase OS=Escherichia coli O127:H6
(strain E2348/69 / EPEC) GN=yjjX PE=3 SV=1
Length = 175
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 31/155 (20%)
Query: 11 ISTFFFLFSFHSAHFLRHSLLSDLGSPRFGNKPLCCPARRRFSSSATRIIPRASSATAVE 70
+ F +F S H ++ S + FG++ AR R ++ A R++P A A+E
Sbjct: 18 LQAFHEIFGEGSCHIASVAVESGVPEQPFGSEETRAGARNRVAN-ARRLLPEADFWVAIE 76
Query: 71 DGSNGDTD------------------TIPTPKVIIDLDSDPDATIVEITFGDRLGALLDT 112
G +GD+ T+P P VI++ ++ G+ LG ++
Sbjct: 77 AGIDGDSTFSWVVIENTSQRGEARSATLPLPAVILE----------KVREGEALGPVMSR 126
Query: 113 MNALKNLGLNVVKANVFLDSSGKHNKFAITKAYVL 147
+ +G VF ++GK + ++ V+
Sbjct: 127 YTGIDEIGRKEGAIGVF--TAGKLTRTSVYHQAVI 159
>sp|B1IS25|NCPP_ECOLC Non-canonical purine NTP phosphatase OS=Escherichia coli (strain
ATCC 8739 / DSM 1576 / Crooks) GN=yjjX PE=3 SV=1
Length = 173
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 31/155 (20%)
Query: 11 ISTFFFLFSFHSAHFLRHSLLSDLGSPRFGNKPLCCPARRRFSSSATRIIPRASSATAVE 70
+ F +F S H ++ S + FG++ AR R ++ A R++P A A+E
Sbjct: 18 LQAFHEIFGEGSCHIASVAVESGVPEQPFGSEETRAGARNRVAN-ARRLLPEADFWVAIE 76
Query: 71 DGSNGDTD------------------TIPTPKVIIDLDSDPDATIVEITFGDRLGALLDT 112
G +GD+ T+P P VI++ ++ G+ LG ++
Sbjct: 77 AGIDGDSTFSWVVIENASQRGEARSATLPLPAVILE----------KVREGEALGPVMSR 126
Query: 113 MNALKNLGLNVVKANVFLDSSGKHNKFAITKAYVL 147
+ +G VF ++GK + ++ V+
Sbjct: 127 YTGIDEIGRKEGAIGVF--TAGKLTRASVYHQAVI 159
>sp|Q8XB14|NCPP_ECO57 Non-canonical purine NTP phosphatase OS=Escherichia coli O157:H7
GN=yjjX PE=3 SV=2
Length = 170
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 31/155 (20%)
Query: 11 ISTFFFLFSFHSAHFLRHSLLSDLGSPRFGNKPLCCPARRRFSSSATRIIPRASSATAVE 70
+ F +F S H ++ S + FG++ AR R ++ A R++P A A+E
Sbjct: 18 LQAFHEIFGEGSCHIASIAVESGVPEQPFGSEETRAGARNRVAN-ARRLLPEADFWVAIE 76
Query: 71 DGSNGDTD------------------TIPTPKVIIDLDSDPDATIVEITFGDRLGALLDT 112
G +GD+ T+P P VI++ ++ G+ LG ++
Sbjct: 77 AGIDGDSTFSWVVIENTTQRGEARSATLPLPAVILE----------KVREGEALGPVMSR 126
Query: 113 MNALKNLGLNVVKANVFLDSSGKHNKFAITKAYVL 147
+ +G VF ++GK + ++ V+
Sbjct: 127 YTGIDEIGRKEGAIGVF--TAGKLTRASVYHQAVI 159
>sp|Q1B3F3|MOAA_MYCSS Cyclic pyranopterin monophosphate synthase OS=Mycobacterium sp.
(strain MCS) GN=moaA PE=3 SV=1
Length = 350
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 25/48 (52%)
Query: 84 KVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLD 131
+V + LDS A IT DRLG +L + A K GL VK N LD
Sbjct: 138 RVNVSLDSVDAAHFARITRRDRLGDVLAGLAAAKEAGLTPVKVNAVLD 185
>sp|A1ULP7|MOAA_MYCSK Cyclic pyranopterin monophosphate synthase OS=Mycobacterium sp.
(strain KMS) GN=moaA PE=3 SV=1
Length = 350
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 25/48 (52%)
Query: 84 KVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLD 131
+V + LDS A IT DRLG +L + A K GL VK N LD
Sbjct: 138 RVNVSLDSVDAAHFARITRRDRLGDVLAGLAAAKEAGLTPVKVNAVLD 185
>sp|A3Q648|MOAA_MYCSJ Cyclic pyranopterin monophosphate synthase OS=Mycobacterium sp.
(strain JLS) GN=moaA PE=3 SV=1
Length = 350
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 25/48 (52%)
Query: 84 KVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLD 131
+V + LDS A IT DRLG +L + A K GL VK N LD
Sbjct: 138 RVNVSLDSVDAAHFARITRRDRLGDVLAGLAAAKEAGLTPVKVNAVLD 185
>sp|B2HFA4|MOAA_MYCMM Cyclic pyranopterin monophosphate synthase OS=Mycobacterium marinum
(strain ATCC BAA-535 / M) GN=moaA PE=3 SV=1
Length = 360
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 84 KVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLD-SSGKHN----- 137
+V + LD+ A IT DRL +LD + + GL VK N LD +G+ +
Sbjct: 144 RVNVSLDTVDRAHFAAITRRDRLTDVLDGLAGARAAGLTPVKVNAVLDPETGRQDVVELL 203
Query: 138 KFAITKAYVL 147
+F + + Y L
Sbjct: 204 RFCLEQGYQL 213
>sp|A0PKZ7|MOAA_MYCUA Cyclic pyranopterin monophosphate synthase OS=Mycobacterium
ulcerans (strain Agy99) GN=moaA PE=3 SV=1
Length = 360
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 84 KVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLD-SSGKHN----- 137
+V + LD+ A +T DRL +LD + + GL VK N LD +G+ +
Sbjct: 144 RVNVSLDTVDRAHFAAVTRRDRLTDVLDGLAGARAAGLTPVKVNAVLDPETGRQDVVELL 203
Query: 138 KFAITKAYVL 147
+F + + Y L
Sbjct: 204 RFCLEQGYQL 213
>sp|Q5FPT6|GLND_GLUOX [Protein-PII] uridylyltransferase OS=Gluconobacter oxydans (strain
621H) GN=glnD PE=3 SV=1
Length = 949
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 68 AVEDGSNGDTDT------IPTPKVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGL 121
+ED S+ T +P P+V+ID + T++E+ DR G L D +AL + L
Sbjct: 836 GIEDASHHSTSRRMRAIHVP-PRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASL 894
Query: 122 NVVKANV 128
+ A++
Sbjct: 895 QISSAHI 901
>sp|B0T338|ATPA_CAUSK ATP synthase subunit alpha OS=Caulobacter sp. (strain K31) GN=atpA
PE=3 SV=1
Length = 510
Score = 32.0 bits (71), Expect = 1.4, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 23/52 (44%)
Query: 30 LLSDLGSPRFGNKPLCCPARRRFSSSATRIIPRASSATAVEDGSNGDTDTIP 81
+++ LG P G P+ RRR A IIPR S V+ G IP
Sbjct: 108 VVNPLGEPIDGKGPIVSTERRRVDVKAPGIIPRKSVHEPVQTGLKSIDTLIP 159
>sp|Q1QRM1|GLND_NITHX [Protein-PII] uridylyltransferase OS=Nitrobacter hamburgensis
(strain X14 / DSM 10229) GN=glnD PE=3 SV=1
Length = 931
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 83 PKVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANV 128
PKVI++ T++E++ DR G L A+ L LN+ A+V
Sbjct: 837 PKVIVNNQWSDRHTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHV 882
>sp|Q5NQZ1|ATPA_ZYMMO ATP synthase subunit alpha OS=Zymomonas mobilis subsp. mobilis
(strain ATCC 31821 / ZM4 / CP4) GN=atpA PE=3 SV=1
Length = 509
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 20/39 (51%)
Query: 34 LGSPRFGNKPLCCPARRRFSSSATRIIPRASSATAVEDG 72
LG+P G P+ RRR A IIPR S AV+ G
Sbjct: 111 LGNPIDGKGPINAKLRRRSEEMAPGIIPRKSVHEAVQTG 149
>sp|Q2RNG2|GLND_RHORT [Protein-PII] uridylyltransferase OS=Rhodospirillum rubrum (strain
ATCC 11170 / NCIB 8255) GN=glnD PE=3 SV=1
Length = 936
Score = 31.6 bits (70), Expect = 1.9, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 79 TIPTPKVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANV 128
T+P P+VI+D + T++EI DR G L AL ++ + + A V
Sbjct: 823 TVP-PRVIVDNQASKTHTVIEINGRDRPGFLYAVTRALTDVAVQISSARV 871
>sp|P37211|ATPA_NEUCR ATP synthase subunit alpha, mitochondrial OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=atp-1 PE=3 SV=1
Length = 551
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 30 LLSDLGSPRFGNKPLCCPARRRFSSSATRIIPRASSATAVEDGSNGDTDTIP 81
++ LG+P G P+ C +RR A I+PR S V+ G +P
Sbjct: 148 VIDALGNPIDGKGPINCKEKRRAQLKAPGILPRQSVNQPVQTGLKSVDAMVP 199
>sp|Q2UGQ2|EFGM_ASPOR Elongation factor G, mitochondrial OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=mef1 PE=3 SV=1
Length = 799
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query: 97 IVEITFGDRLGALLDTMNALKNLGLNVVKANVFL-----DSSGKHNKF 139
I E+ GD++GA +D+M+ + G+ + A F D GK NK+
Sbjct: 129 IHEVRGGDKVGAKMDSMDLEREKGITIQSAATFCDWVKKDEDGKENKY 176
>sp|B8N9M2|EFGM_ASPFN Elongation factor G, mitochondrial OS=Aspergillus flavus (strain
ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC
167) GN=mef1 PE=3 SV=1
Length = 799
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query: 97 IVEITFGDRLGALLDTMNALKNLGLNVVKANVFL-----DSSGKHNKF 139
I E+ GD++GA +D+M+ + G+ + A F D GK NK+
Sbjct: 129 IHEVRGGDKVGAKMDSMDLEREKGITIQSAATFCDWVKKDEDGKENKY 176
>sp|Q9AC53|GLND_CAUCR [Protein-PII] uridylyltransferase OS=Caulobacter crescentus (strain
ATCC 19089 / CB15) GN=glnD PE=3 SV=1
Length = 940
Score = 31.2 bits (69), Expect = 2.4, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 83 PKVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANV 128
P V ID D+ DAT+VE + DR G L L + L++ A++
Sbjct: 834 PSVTIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHI 879
>sp|B8GWX0|GLND_CAUCN [Protein-PII] uridylyltransferase OS=Caulobacter crescentus (strain
NA1000 / CB15N) GN=glnD PE=3 SV=1
Length = 940
Score = 31.2 bits (69), Expect = 2.4, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 83 PKVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANV 128
P V ID D+ DAT+VE + DR G L L + L++ A++
Sbjct: 834 PSVTIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHI 879
>sp|P08104|SCN3A_RAT Sodium channel protein type 3 subunit alpha OS=Rattus norvegicus
GN=Scn3a PE=1 SV=1
Length = 1951
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 27 RHSLLSDLGSPRFGNKPLCCPARRRFSSSATRIIPRASSATAV 69
R LLS G+P G+K LC P + S + PR +S T++
Sbjct: 535 RSFLLSLDGNPLTGDKKLCSPHQSLLSIRGSLFSPRRNSKTSI 577
>sp|B4RC79|GLND_PHEZH [Protein-PII] uridylyltransferase OS=Phenylobacterium zucineum
(strain HLK1) GN=glnD PE=3 SV=1
Length = 938
Score = 30.8 bits (68), Expect = 3.2, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 28/47 (59%)
Query: 82 TPKVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANV 128
TP V++D ++ +T+VE + DR G L + + GL+++ A++
Sbjct: 830 TPAVMLDNEASETSTVVEASGRDRPGLLAALARTISDAGLSILSAHI 876
>sp|Q3SWE0|GLND_NITWN [Protein-PII] uridylyltransferase OS=Nitrobacter winogradskyi
(strain Nb-255 / ATCC 25391) GN=glnD PE=3 SV=1
Length = 925
Score = 30.4 bits (67), Expect = 3.9, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 83 PKVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANV 128
PKV I+ T++E++ DR G L A+ L LN+ A+V
Sbjct: 835 PKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHV 880
>sp|Q0CLP3|EFGM_ASPTN Elongation factor G, mitochondrial OS=Aspergillus terreus (strain
NIH 2624 / FGSC A1156) GN=mef1 PE=3 SV=1
Length = 802
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 97 IVEITFGDRLGALLDTMNALKNLGLNVVKANVFL-----DSSGKHNKFAI 141
I E+ GD++GA +D+M+ + G+ + A F D GK +K+ I
Sbjct: 132 IHEVRGGDKVGAKMDSMDLEREKGITIQSAATFCDWVKKDKEGKEHKYHI 181
>sp|Q2Y5Q1|GLND_NITMU [Protein-PII] uridylyltransferase OS=Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849) GN=glnD PE=3 SV=1
Length = 887
Score = 30.0 bits (66), Expect = 5.2, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 82 TPKVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAI 141
TP+V I+ D ++ IT GD+ G L L GLNV A + + F +
Sbjct: 781 TPQVSIEPDDSGAYYVLSITAGDQSGLLSRIAQVLVRFGLNVHSARINTLGERAEDTFLV 840
Query: 142 T 142
T
Sbjct: 841 T 841
>sp|Q89VX9|GLND_BRAJA [Protein-PII] uridylyltransferase OS=Bradyrhizobium japonicum
(strain USDA 110) GN=glnD PE=3 SV=2
Length = 929
Score = 29.6 bits (65), Expect = 7.1, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 83 PKVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANV 128
P+V I+ T++E++ DR G L + A+ L LN+ A+V
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHV 881
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,403,609
Number of Sequences: 539616
Number of extensions: 2066751
Number of successful extensions: 5233
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 5199
Number of HSP's gapped (non-prelim): 52
length of query: 147
length of database: 191,569,459
effective HSP length: 106
effective length of query: 41
effective length of database: 134,370,163
effective search space: 5509176683
effective search space used: 5509176683
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)