AmiGO: BLAST Results

Query Summary

Your job contains 1 sequence.
Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on
Query Sequence

>032119
MRPPRGGGGFRGGRDGGRGGRGGGRFGGGGRGGGGRGGFGFRDEGPPAEVVEVSSFLHAC
EGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSYSLGD
KFYIDPSKLLPLARFLPQPKCSVSHWY
High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT3G03920 AT3G03920 AT3G03920	protein from Arabidopsis thaliana	1.9e-42
BLAST match view associations BLAST with AT5G18180 AT5G18180 AT5G18180	protein from Arabidopsis thaliana	1.2e-40
BLAST match view associations BLAST with GAR1 GAR1 GAR1 Protein component of the H/ACA snoRNP pseudouridylase complex	gene from Saccharomyces cerevisiae	2.6e-31
BLAST match view associations BLAST with GAR1 GAR1 GAR1	gene_product from Candida albicans	3.3e-31
BLAST match view associations BLAST with GAR1 GAR1 GAR1 Putative uncharacterized protein GAR1	protein from Candida albicans SC5314	3.3e-31
BLAST match view associations BLAST with GAR1 GAR1 GAR1 Uncharacterized protein	protein from Bos taurus	5.0e-28
BLAST match view associations BLAST with LOC100516629 LOC100516629 LOC100516629 Uncharacterized protein	protein from Sus scrofa	5.0e-28
BLAST match view associations BLAST with Gar1 Gar1 Gar1 GAR1 ribonucleoprotein homolog (yeast)	gene from Rattus norvegicus	6.4e-28
BLAST match view associations BLAST with GAR1 GAR1 GAR1 Uncharacterized protein	protein from Canis lupus familiaris	8.2e-28
BLAST match view associations BLAST with GAR1 GAR1 GAR1 H/ACA ribonucleoprotein complex subunit 1	protein from Homo sapiens	8.2e-28
BLAST match view associations BLAST with Gar1 Gar1 Gar1 GAR1 ribonucleoprotein homolog (yeast)	protein from Mus musculus	8.2e-28
BLAST match view associations BLAST with GAR1 GAR1 GAR1 Uncharacterized protein	protein from Gallus gallus	2.2e-27
BLAST match view associations BLAST with F1S134 F1S134 F1S134 Uncharacterized protein	protein from Sus scrofa	5.7e-27
BLAST match view associations BLAST with gar1 gar1 gar1 GAR1 ribonucleoprotein homolog (yeast)	gene_product from Danio rerio	1.5e-26
BLAST match view associations BLAST with Y66H1A.4 Y66H1A.4 Y66H1A.4	gene from Caenorhabditis elegans	1.6e-24
BLAST match view associations BLAST with CG4038 CG4038 CG4038	protein from Drosophila melanogaster	8.7e-24
BLAST match view associations BLAST with PF13_0051 PF13_0051 PF13_0051 snornp protein gar1 homologue, putative	gene from Plasmodium falciparum	3.9e-21
BLAST match view associations BLAST with PF13_0051 PF13_0051 PF13_0051 Snornp protein gar1 homologue, putative	protein from Plasmodium falciparum 3D7	3.9e-21
BLAST match view associations BLAST with GAR1 GAR1 GAR1 Uncharacterized protein	protein from Canis lupus familiaris	2.5e-19
BLAST match view associations BLAST with nola1 nola1 nola1 Gar1 family protein	gene from Dictyostelium discoideum	8.3e-19
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032119
        (147 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2079349 - symbol:AT3G03920 "AT3G03920" species...   449  1.9e-42   1
TAIR|locus:2172329 - symbol:AT5G18180 "AT5G18180" species...   432  1.2e-40   1
SGD|S000001131 - symbol:GAR1 "Protein component of the H/...   344  2.6e-31   1
CGD|CAL0002072 - symbol:GAR1 species:5476 "Candida albica...   343  3.3e-31   1
UNIPROTKB|Q59TT0 - symbol:GAR1 "Putative uncharacterized ...   343  3.3e-31   1
POMBASE|SPBC20F10.01 - symbol:gar1 "snoRNP pseudouridylas...   342  4.2e-31   1
ASPGD|ASPL0000026673 - symbol:AN10712 species:162425 "Eme...   341  5.4e-31   1
UNIPROTKB|F1MRF7 - symbol:GAR1 "Uncharacterized protein" ...   313  5.0e-28   1
UNIPROTKB|I3LVQ6 - symbol:LOC100516629 "Uncharacterized p...   313  5.0e-28   1
RGD|1563995 - symbol:Gar1 "GAR1 ribonucleoprotein homolog...   312  6.4e-28   1
UNIPROTKB|Q6AYA1 - symbol:Gar1 "H/ACA ribonucleoprotein c...   312  6.4e-28   1
UNIPROTKB|E2R6F2 - symbol:GAR1 "Uncharacterized protein" ...   311  8.2e-28   1
UNIPROTKB|Q9NY12 - symbol:GAR1 "H/ACA ribonucleoprotein c...   311  8.2e-28   1
MGI|MGI:1930948 - symbol:Gar1 "GAR1 ribonucleoprotein hom...   311  8.2e-28   1
UNIPROTKB|E1C818 - symbol:GAR1 "Uncharacterized protein" ...   307  2.2e-27   1
UNIPROTKB|F1S134 - symbol:F1S134 "Uncharacterized protein...   303  5.7e-27   1
ZFIN|ZDB-GENE-040426-893 - symbol:gar1 "GAR1 ribonucleopr...   299  1.5e-26   1
WB|WBGene00022046 - symbol:Y66H1A.4 species:6239 "Caenorh...   280  1.6e-24   1
FB|FBgn0011824 - symbol:CG4038 species:7227 "Drosophila m...   273  8.7e-24   1
GENEDB_PFALCIPARUM|PF13_0051 - symbol:PF13_0051 "snornp p...   248  3.9e-21   1
UNIPROTKB|Q8I700 - symbol:PF13_0051 "Snornp protein gar1 ...   248  3.9e-21   1
UNIPROTKB|F6XGZ6 - symbol:GAR1 "Uncharacterized protein" ...   231  2.5e-19   1
DICTYBASE|DDB_G0279013 - symbol:nola1 "Gar1 family protei...   226  8.3e-19   1


>TAIR|locus:2079349 [details] [associations]
            symbol:AT3G03920 "AT3G03920" species:3702 "Arabidopsis
            thaliana" [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0009982 "pseudouridine synthase
            activity" evidence=IEA] [GO:0030515 "snoRNA binding" evidence=IEA]
            [GO:0031120 "snRNA pseudouridine synthesis" evidence=IEA]
            [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0009535
            "chloroplast thylakoid membrane" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
            [GO:0001510 "RNA methylation" evidence=RCA] [GO:0006364 "rRNA
            processing" evidence=RCA] [GO:0009909 "regulation of flower
            development" evidence=RCA] [GO:0034968 "histone lysine methylation"
            evidence=RCA] [GO:0042991 "transcription factor import into
            nucleus" evidence=RCA] InterPro:IPR007504 InterPro:IPR021154
            Pfam:PF04410 ProDom:PD020235 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0030515 GO:GO:0009535
            EMBL:AC009540 GO:GO:0006364 GO:GO:0009982 GO:GO:0031429
            GO:GO:0031120 InterPro:IPR009000 SUPFAM:SSF50447 EMBL:AC011698
            UniGene:At.27423 eggNOG:COG3277 KO:K11128 OMA:NVKIPYF
            PANTHER:PTHR23237 EMBL:AY063874 EMBL:AY091234 EMBL:AY084502
            IPI:IPI00548450 RefSeq:NP_566217.1 ProteinModelPortal:Q8VZT0
            SMR:Q8VZT0 STRING:Q8VZT0 PaxDb:Q8VZT0 PRIDE:Q8VZT0
            EnsemblPlants:AT3G03920.1 GeneID:821062 KEGG:ath:AT3G03920
            TAIR:At3g03920 HOGENOM:HOG000113795 InParanoid:Q8VZT0
            PhylomeDB:Q8VZT0 ProtClustDB:CLSN2686541 Genevestigator:Q8VZT0
            GermOnline:AT3G03920 Uniprot:Q8VZT0
        Length = 202

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 84/97 (86%), Positives = 93/97 (95%)

Query:    44 EGPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYF 103
             EGPP+EVVEV++F+HACEGDAVTKL+ EKIP+FNAPIYL+NKTQIGKVDEIFGPINES F
Sbjct:    52 EGPPSEVVEVATFVHACEGDAVTKLSQEKIPHFNAPIYLENKTQIGKVDEIFGPINESLF 111

Query:   104 SVKMMEGIVATSYSLGDKFYIDPSKLLPLARFLPQPK 140
             S+KMMEGIVATSYS GDKF+IDP KLLPLARFLPQPK
Sbjct:   112 SIKMMEGIVATSYSPGDKFFIDPYKLLPLARFLPQPK 148


>TAIR|locus:2172329 [details] [associations]
            symbol:AT5G18180 "AT5G18180" species:3702 "Arabidopsis
            thaliana" [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0009982 "pseudouridine synthase
            activity" evidence=IEA] [GO:0030515 "snoRNA binding" evidence=IEA]
            [GO:0031120 "snRNA pseudouridine synthesis" evidence=IEA]
            [GO:0031429 "box H/ACA snoRNP complex" evidence=IEA] [GO:0042254
            "ribosome biogenesis" evidence=IEA] [GO:0009535 "chloroplast
            thylakoid membrane" evidence=IDA] [GO:0016020 "membrane"
            evidence=IDA] InterPro:IPR007504 InterPro:IPR021154 Pfam:PF04410
            ProDom:PD020235 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0030515 EMBL:AB012246 GO:GO:0009535 GO:GO:0006364
            GO:GO:0009982 GO:GO:0031429 GO:GO:0031120 InterPro:IPR009000
            SUPFAM:SSF50447 eggNOG:COG3277 KO:K11128 PANTHER:PTHR23237
            ProtClustDB:CLSN2686541 IPI:IPI00527150 RefSeq:NP_197319.1
            UniGene:At.54895 ProteinModelPortal:Q9FK53 SMR:Q9FK53 STRING:Q9FK53
            EnsemblPlants:AT5G18180.1 GeneID:831936 KEGG:ath:AT5G18180
            TAIR:At5g18180 InParanoid:Q9FK53 OMA:GRVDEIF PhylomeDB:Q9FK53
            Genevestigator:Q9FK53 GermOnline:AT5G18180 Uniprot:Q9FK53
        Length = 189

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 81/97 (83%), Positives = 90/97 (92%)

Query:    44 EGPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYF 103
             EGPP+EVVEV++FLHACEGDAV KL+N KIP+FNAPIYLQNKTQIG+VDEIFGPINES F
Sbjct:    39 EGPPSEVVEVATFLHACEGDAVFKLSNVKIPHFNAPIYLQNKTQIGRVDEIFGPINESLF 98

Query:   104 SVKMMEGIVATSYSLGDKFYIDPSKLLPLARFLPQPK 140
             S+KM EGIVATSYS GDKF+I P KLLPL+RFLPQPK
Sbjct:    99 SIKMREGIVATSYSQGDKFFISPEKLLPLSRFLPQPK 135


>SGD|S000001131 [details] [associations]
            symbol:GAR1 "Protein component of the H/ACA snoRNP
            pseudouridylase complex" species:4932 "Saccharomyces cerevisiae"
            [GO:0006364 "rRNA processing" evidence=IEA;TAS] [GO:0034513 "box
            H/ACA snoRNA binding" evidence=IPI] [GO:0005732 "small nucleolar
            ribonucleoprotein complex" evidence=IPI] [GO:0031120 "snRNA
            pseudouridine synthesis" evidence=IEA;IDA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0042254
            "ribosome biogenesis" evidence=IEA] [GO:0031429 "box H/ACA snoRNP
            complex" evidence=IEA;IPI] [GO:0030515 "snoRNA binding"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0009982
            "pseudouridine synthase activity" evidence=IEA] InterPro:IPR007504
            InterPro:IPR021154 Pfam:PF04410 ProDom:PD020235 SGD:S000001131
            EMBL:BK006934 GO:GO:0006364 GeneTree:ENSGT00530000063105
            GO:GO:0009982 GO:GO:0031429 GO:GO:0031120 GO:GO:0034513 PDB:3U28
            PDB:3UAI PDBsum:3U28 PDBsum:3UAI InterPro:IPR009000 SUPFAM:SSF50447
            eggNOG:COG3277 KO:K11128 OMA:NVKIPYF PANTHER:PTHR23237
            OrthoDB:EOG4QRMDS EMBL:X63617 EMBL:U00060 EMBL:AY558284 PIR:S19634
            RefSeq:NP_011957.1 ProteinModelPortal:P28007 SMR:P28007
            DIP:DIP-4484N IntAct:P28007 MINT:MINT-551032 STRING:P28007
            PaxDb:P28007 PeptideAtlas:P28007 PRIDE:P28007 EnsemblFungi:YHR089C
            GeneID:856489 KEGG:sce:YHR089C CYGD:YHR089c NextBio:982191
            Genevestigator:P28007 GermOnline:YHR089C Uniprot:P28007
        Length = 205

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 61/97 (62%), Positives = 77/97 (79%)

Query:    44 EGPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYF 103
             +GPP  V+E+ +FLH CEGD V +  N KIPYFNAPIYL+NKTQ+GKVDEI GP+NE +F
Sbjct:    31 QGPPDTVLEMGAFLHPCEGDIVCRSINTKIPYFNAPIYLENKTQVGKVDEILGPLNEVFF 90

Query:   104 SVKMMEGIVATSYSLGDKFYIDPSKLLPLARFLPQPK 140
             ++K  +G+ ATS+  GDKFYI   KLLP+ RFLP+PK
Sbjct:    91 TIKCGDGVQATSFKEGDKFYIAADKLLPIERFLPKPK 127


>CGD|CAL0002072 [details] [associations]
            symbol:GAR1 species:5476 "Candida albicans" [GO:0035690
            "cellular response to drug" evidence=IMP] [GO:0031429 "box H/ACA
            snoRNP complex" evidence=IEA] [GO:0031120 "snRNA pseudouridine
            synthesis" evidence=IEA] [GO:0031118 "rRNA pseudouridine synthesis"
            evidence=IEA] [GO:0034513 "box H/ACA snoRNA binding" evidence=IEA]
            InterPro:IPR007504 InterPro:IPR021154 Pfam:PF04410 ProDom:PD020235
            CGD:CAL0002072 GO:GO:0030515 GO:GO:0042254 GO:GO:0035690
            GO:GO:0009982 GO:GO:0031429 GO:GO:0031120 InterPro:IPR009000
            SUPFAM:SSF50447 eggNOG:COG3277 KO:K11128 PANTHER:PTHR23237
            EMBL:AACQ01000137 RefSeq:XP_713031.1 ProteinModelPortal:Q59TT0
            STRING:Q59TT0 GeneID:3645332 KEGG:cal:CaO19.1164 Uniprot:Q59TT0
        Length = 186

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 62/95 (65%), Positives = 75/95 (78%)

Query:    45 GPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFS 104
             GPP  V+E+ SF+ ACEGD V +  N KIPYFNAPIYL+NKTQ+GKVDEI GP+NE +F+
Sbjct:    22 GPPDTVLEMGSFMQACEGDIVCRSINVKIPYFNAPIYLENKTQVGKVDEILGPLNEVFFT 81

Query:   105 VKMMEGIVATSYSLGDKFYIDPSKLLPLARFLPQP 139
             +K  EG+ A S+  GDKFYI P KLLPL RFLP+P
Sbjct:    82 IKPSEGVKAESFKEGDKFYIGPDKLLPLERFLPKP 116


>UNIPROTKB|Q59TT0 [details] [associations]
            symbol:GAR1 "Putative uncharacterized protein GAR1"
            species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
            response to drug" evidence=IMP] InterPro:IPR007504
            InterPro:IPR021154 Pfam:PF04410 ProDom:PD020235 CGD:CAL0002072
            GO:GO:0030515 GO:GO:0042254 GO:GO:0035690 GO:GO:0009982
            GO:GO:0031429 GO:GO:0031120 InterPro:IPR009000 SUPFAM:SSF50447
            eggNOG:COG3277 KO:K11128 PANTHER:PTHR23237 EMBL:AACQ01000137
            RefSeq:XP_713031.1 ProteinModelPortal:Q59TT0 STRING:Q59TT0
            GeneID:3645332 KEGG:cal:CaO19.1164 Uniprot:Q59TT0
        Length = 186

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 62/95 (65%), Positives = 75/95 (78%)

Query:    45 GPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFS 104
             GPP  V+E+ SF+ ACEGD V +  N KIPYFNAPIYL+NKTQ+GKVDEI GP+NE +F+
Sbjct:    22 GPPDTVLEMGSFMQACEGDIVCRSINVKIPYFNAPIYLENKTQVGKVDEILGPLNEVFFT 81

Query:   105 VKMMEGIVATSYSLGDKFYIDPSKLLPLARFLPQP 139
             +K  EG+ A S+  GDKFYI P KLLPL RFLP+P
Sbjct:    82 IKPSEGVKAESFKEGDKFYIGPDKLLPLERFLPKP 116


>POMBASE|SPBC20F10.01 [details] [associations]
            symbol:gar1 "snoRNP pseudouridylase box H/ACA snoRNP
            complex protein Gar1" species:4896 "Schizosaccharomyces pombe"
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0006364 "rRNA processing" evidence=IGI]
            [GO:0009982 "pseudouridine synthase activity" evidence=IEA]
            [GO:0019843 "rRNA binding" evidence=IC] [GO:0031118 "rRNA
            pseudouridine synthesis" evidence=IGI] [GO:0031120 "snRNA
            pseudouridine synthesis" evidence=IGI] [GO:0031429 "box H/ACA
            snoRNP complex" evidence=IGI] [GO:0034513 "box H/ACA snoRNA
            binding" evidence=ISO] InterPro:IPR007504 InterPro:IPR021154
            Pfam:PF04410 ProDom:PD020235 PomBase:SPBC20F10.01 EMBL:CU329671
            GenomeReviews:CU329671_GR GO:GO:0019843 GO:GO:0009982 GO:GO:0031429
            GO:GO:0031118 GO:GO:0031120 GO:GO:0034513 InterPro:IPR009000
            SUPFAM:SSF50447 eggNOG:COG3277 KO:K11128 OMA:NVKIPYF
            PANTHER:PTHR23237 EMBL:Z19576 EMBL:AB000537 PIR:S33691
            RefSeq:NP_596365.1 STRING:Q06975 PRIDE:Q06975
            EnsemblFungi:SPBC20F10.01.1 GeneID:2540705 KEGG:spo:SPBC20F10.01
            OrthoDB:EOG4QRMDS NextBio:20801827 Uniprot:Q06975
        Length = 194

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 59/96 (61%), Positives = 79/96 (82%)

Query:    45 GPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFS 104
             GPP +V+E+  F+H CEG+ V + TN KIPYFNAPIYL+NK+QIGK+DE+FGP+N+ YF+
Sbjct:    25 GPPDQVIELGLFMHDCEGEMVCQSTNVKIPYFNAPIYLENKSQIGKIDEVFGPMNQVYFT 84

Query:   105 VKMMEGIVATSYSLGDKFYIDPSKLLPLARFLPQPK 140
             VK  EGIV++S+ +GDK Y+   KL+PL RFLP+PK
Sbjct:    85 VKPSEGIVSSSFKVGDKVYLSGDKLIPLDRFLPKPK 120


>ASPGD|ASPL0000026673 [details] [associations]
            symbol:AN10712 species:162425 "Emericella nidulans"
            [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0031429 "box
            H/ACA snoRNP complex" evidence=IEA] [GO:0009982 "pseudouridine
            synthase activity" evidence=IEA] [GO:0031120 "snRNA pseudouridine
            synthesis" evidence=IEA] [GO:0030515 "snoRNA binding" evidence=IEA]
            InterPro:IPR007504 InterPro:IPR021154 Pfam:PF04410 ProDom:PD020235
            GO:GO:0042254 EMBL:BN001305 GO:GO:0009982 GO:GO:0031429
            GO:GO:0031120 GO:GO:0034513 InterPro:IPR009000 SUPFAM:SSF50447
            OMA:NVKIPYF PANTHER:PTHR23237 EnsemblFungi:CADANIAT00003405
            Uniprot:C8VFT3
        Length = 197

 Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
 Identities = 60/96 (62%), Positives = 77/96 (80%)

Query:    45 GPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFS 104
             GPP +V+E+ +F+HACEG+ V +  N KIPYFNAPIYL+NKT IGK+DE+ GPIN+ YF+
Sbjct:    33 GPPDQVLEMGTFMHACEGEMVCESINPKIPYFNAPIYLENKTPIGKIDEVLGPINQVYFT 92

Query:   105 VKMMEGIVATSYSLGDKFYIDPSKLLPLARFLPQPK 140
             +K  EGIVATS+  GDK YI   KLLP+ +FLP+PK
Sbjct:    93 IKPQEGIVATSFKPGDKVYIGGDKLLPIEKFLPKPK 128


>UNIPROTKB|F1MRF7 [details] [associations]
            symbol:GAR1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0031429
            "box H/ACA snoRNP complex" evidence=IEA] [GO:0031120 "snRNA
            pseudouridine synthesis" evidence=IEA] [GO:0030515 "snoRNA binding"
            evidence=IEA] [GO:0009982 "pseudouridine synthase activity"
            evidence=IEA] InterPro:IPR007504 InterPro:IPR021154 Pfam:PF04410
            ProDom:PD020235 GO:GO:0030515 GO:GO:0042254
            GeneTree:ENSGT00530000063105 GO:GO:0009982 GO:GO:0031429
            GO:GO:0031120 InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR23237
            OMA:ELYIDPG EMBL:DAAA02016540 IPI:IPI00707579
            Ensembl:ENSBTAT00000000992 Uniprot:F1MRF7
        Length = 210

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 59/98 (60%), Positives = 73/98 (74%)

Query:    44 EGPPAEVVEVSSFLHACEGDAVTKLTNE--KIPYFNAPIYLQNKTQIGKVDEIFGPINES 101
             +GPP +VV +  FLH CE D V K T +  K+PYFNAP+YL+NK QIGKVDEIFG + + 
Sbjct:    59 QGPPEQVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQLRDF 118

Query:   102 YFSVKMMEGIVATSYSLGDKFYIDPSKLLPLARFLPQP 139
             YFSVK+ E + A+S+    KFYIDP KLLPL RFLP+P
Sbjct:   119 YFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRP 156


>UNIPROTKB|I3LVQ6 [details] [associations]
            symbol:LOC100516629 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0042254 "ribosome biogenesis" evidence=IEA]
            [GO:0031429 "box H/ACA snoRNP complex" evidence=IEA] [GO:0031120
            "snRNA pseudouridine synthesis" evidence=IEA] [GO:0030515 "snoRNA
            binding" evidence=IEA] [GO:0009982 "pseudouridine synthase
            activity" evidence=IEA] InterPro:IPR007504 InterPro:IPR021154
            Pfam:PF04410 ProDom:PD020235 GO:GO:0030515 GO:GO:0042254
            GeneTree:ENSGT00530000063105 GO:GO:0009982 GO:GO:0031429
            GO:GO:0031120 InterPro:IPR009000 SUPFAM:SSF50447 KO:K11128
            PANTHER:PTHR23237 OMA:ELYIDPG EMBL:CU463265 RefSeq:XP_003129300.1
            RefSeq:XP_003129301.1 UniGene:Ssc.24904 Ensembl:ENSSSCT00000022770
            GeneID:100516629 KEGG:ssc:100516629 Uniprot:I3LVQ6
        Length = 210

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 59/98 (60%), Positives = 73/98 (74%)

Query:    44 EGPPAEVVEVSSFLHACEGDAVTKLTNE--KIPYFNAPIYLQNKTQIGKVDEIFGPINES 101
             +GPP +VV +  FLH CE D V K T +  K+PYFNAP+YL+NK QIGKVDEIFG + + 
Sbjct:    59 QGPPEQVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQLRDF 118

Query:   102 YFSVKMMEGIVATSYSLGDKFYIDPSKLLPLARFLPQP 139
             YFSVK+ E + A+S+    KFYIDP KLLPL RFLP+P
Sbjct:   119 YFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRP 156


>RGD|1563995 [details] [associations]
            symbol:Gar1 "GAR1 ribonucleoprotein homolog (yeast)"
            species:10116 "Rattus norvegicus" [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0009982 "pseudouridine synthase activity"
            evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA] [GO:0030515
            "snoRNA binding" evidence=IEA] [GO:0031120 "snRNA pseudouridine
            synthesis" evidence=IEA] [GO:0031429 "box H/ACA snoRNP complex"
            evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
            InterPro:IPR007504 InterPro:IPR021154 Pfam:PF04410 ProDom:PD020235
            RGD:1563995 GO:GO:0030515 GO:GO:0015030 GO:GO:0006364
            GeneTree:ENSGT00530000063105 GO:GO:0009982 GO:GO:0031429
            GO:GO:0031120 InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG3277
            KO:K11128 PANTHER:PTHR23237 CTD:54433 OrthoDB:EOG480HZ6 OMA:ELYIDPG
            EMBL:BC079131 IPI:IPI00464655 RefSeq:NP_001019477.1
            UniGene:Rn.15522 ProteinModelPortal:Q6AYA1 STRING:Q6AYA1
            PRIDE:Q6AYA1 Ensembl:ENSRNOT00000013149 GeneID:499709
            KEGG:rno:499709 UCSC:RGD:1563995 InParanoid:Q6AYA1 NextBio:703745
            ArrayExpress:Q6AYA1 Genevestigator:Q6AYA1
            GermOnline:ENSRNOG00000009877 Uniprot:Q6AYA1
        Length = 226

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 59/98 (60%), Positives = 72/98 (73%)

Query:    44 EGPPAEVVEVSSFLHACEGDAVTKLTNE--KIPYFNAPIYLQNKTQIGKVDEIFGPINES 101
             +GPP  VV +  F+H CE D V K T E  K+PYFNAP+YL+NK QIGKVDEIFG + + 
Sbjct:    66 QGPPERVVLLGEFMHPCEDDIVCKCTTEENKVPYFNAPVYLENKEQIGKVDEIFGQLRDF 125

Query:   102 YFSVKMMEGIVATSYSLGDKFYIDPSKLLPLARFLPQP 139
             YFSVK+ E + A+S+    KFYIDP KLLPL RFLP+P
Sbjct:   126 YFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRP 163


>UNIPROTKB|Q6AYA1 [details] [associations]
            symbol:Gar1 "H/ACA ribonucleoprotein complex subunit 1"
            species:10116 "Rattus norvegicus" [GO:0009982 "pseudouridine
            synthase activity" evidence=IEA] [GO:0030515 "snoRNA binding"
            evidence=IEA] [GO:0031120 "snRNA pseudouridine synthesis"
            evidence=IEA] [GO:0031429 "box H/ACA snoRNP complex" evidence=IEA]
            InterPro:IPR007504 InterPro:IPR021154 Pfam:PF04410 ProDom:PD020235
            RGD:1563995 GO:GO:0030515 GO:GO:0015030 GO:GO:0006364
            GeneTree:ENSGT00530000063105 GO:GO:0009982 GO:GO:0031429
            GO:GO:0031120 InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG3277
            KO:K11128 PANTHER:PTHR23237 CTD:54433 OrthoDB:EOG480HZ6 OMA:ELYIDPG
            EMBL:BC079131 IPI:IPI00464655 RefSeq:NP_001019477.1
            UniGene:Rn.15522 ProteinModelPortal:Q6AYA1 STRING:Q6AYA1
            PRIDE:Q6AYA1 Ensembl:ENSRNOT00000013149 GeneID:499709
            KEGG:rno:499709 UCSC:RGD:1563995 InParanoid:Q6AYA1 NextBio:703745
            ArrayExpress:Q6AYA1 Genevestigator:Q6AYA1
            GermOnline:ENSRNOG00000009877 Uniprot:Q6AYA1
        Length = 226

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 59/98 (60%), Positives = 72/98 (73%)

Query:    44 EGPPAEVVEVSSFLHACEGDAVTKLTNE--KIPYFNAPIYLQNKTQIGKVDEIFGPINES 101
             +GPP  VV +  F+H CE D V K T E  K+PYFNAP+YL+NK QIGKVDEIFG + + 
Sbjct:    66 QGPPERVVLLGEFMHPCEDDIVCKCTTEENKVPYFNAPVYLENKEQIGKVDEIFGQLRDF 125

Query:   102 YFSVKMMEGIVATSYSLGDKFYIDPSKLLPLARFLPQP 139
             YFSVK+ E + A+S+    KFYIDP KLLPL RFLP+P
Sbjct:   126 YFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRP 163


>UNIPROTKB|E2R6F2 [details] [associations]
            symbol:GAR1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
            [GO:0031429 "box H/ACA snoRNP complex" evidence=IEA] [GO:0031120
            "snRNA pseudouridine synthesis" evidence=IEA] [GO:0030515 "snoRNA
            binding" evidence=IEA] [GO:0009982 "pseudouridine synthase
            activity" evidence=IEA] InterPro:IPR007504 InterPro:IPR021154
            Pfam:PF04410 ProDom:PD020235 GO:GO:0030515 GO:GO:0042254
            GO:GO:0009982 GO:GO:0031429 GO:GO:0031120 InterPro:IPR009000
            SUPFAM:SSF50447 PANTHER:PTHR23237 Ensembl:ENSCAFT00000018244
            Uniprot:E2R6F2
        Length = 207

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 59/98 (60%), Positives = 72/98 (73%)

Query:    44 EGPPAEVVEVSSFLHACEGDAVTKLTNE--KIPYFNAPIYLQNKTQIGKVDEIFGPINES 101
             +GPP  VV +  FLH CE D V K T +  K+PYFNAP+YL+NK QIGKVDEIFG + + 
Sbjct:    58 QGPPEHVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQLRDF 117

Query:   102 YFSVKMMEGIVATSYSLGDKFYIDPSKLLPLARFLPQP 139
             YFSVK+ E + A+S+    KFYIDP KLLPL RFLP+P
Sbjct:   118 YFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRP 155


>UNIPROTKB|Q9NY12 [details] [associations]
            symbol:GAR1 "H/ACA ribonucleoprotein complex subunit 1"
            species:9606 "Homo sapiens" [GO:0009982 "pseudouridine synthase
            activity" evidence=IEA] [GO:0030515 "snoRNA binding" evidence=IEA]
            [GO:0031120 "snRNA pseudouridine synthesis" evidence=IEA]
            [GO:0031429 "box H/ACA snoRNP complex" evidence=IEA] [GO:0006364
            "rRNA processing" evidence=IEA] [GO:0015030 "Cajal body"
            evidence=IEA] [GO:0005261 "cation channel activity" evidence=TAS]
            InterPro:IPR007504 InterPro:IPR021154 Pfam:PF04410 ProDom:PD020235
            EMBL:AJ276003 GO:GO:0030515 GO:GO:0005261 GO:GO:0015030
            GO:GO:0006364 GO:GO:0009982 GO:GO:0031429 GO:GO:0031120
            InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG3277 KO:K11128
            PANTHER:PTHR23237 CTD:54433 OrthoDB:EOG480HZ6 EMBL:AY780787
            EMBL:BC003413 IPI:IPI00302176 IPI:IPI00607820 RefSeq:NP_061856.1
            RefSeq:NP_127460.1 UniGene:Hs.69851 ProteinModelPortal:Q9NY12
            SMR:Q9NY12 IntAct:Q9NY12 MINT:MINT-207666 STRING:Q9NY12
            PhosphoSite:Q9NY12 DMDM:51828015 PaxDb:Q9NY12 PRIDE:Q9NY12
            DNASU:54433 Ensembl:ENST00000226796 Ensembl:ENST00000394631
            GeneID:54433 KEGG:hsa:54433 UCSC:uc003hzt.3 UCSC:uc010imi.3
            GeneCards:GC04P110736 HGNC:HGNC:14264 MIM:606468 neXtProt:NX_Q9NY12
            PharmGKB:PA164720194 HOGENOM:HOG000112695 InParanoid:Q9NY12
            OMA:ELYIDPG GenomeRNAi:54433 NextBio:56637 Bgee:Q9NY12
            CleanEx:HS_GAR1 Genevestigator:Q9NY12 GermOnline:ENSG00000109534
            Uniprot:Q9NY12
        Length = 217

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 59/98 (60%), Positives = 72/98 (73%)

Query:    44 EGPPAEVVEVSSFLHACEGDAVTKLTNE--KIPYFNAPIYLQNKTQIGKVDEIFGPINES 101
             +GPP  VV +  FLH CE D V K T +  K+PYFNAP+YL+NK QIGKVDEIFG + + 
Sbjct:    64 QGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQLRDF 123

Query:   102 YFSVKMMEGIVATSYSLGDKFYIDPSKLLPLARFLPQP 139
             YFSVK+ E + A+S+    KFYIDP KLLPL RFLP+P
Sbjct:   124 YFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRP 161


>MGI|MGI:1930948 [details] [associations]
            symbol:Gar1 "GAR1 ribonucleoprotein homolog (yeast)"
            species:10090 "Mus musculus" [GO:0001651 "dense fibrillar
            component" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0009982 "pseudouridine synthase activity"
            evidence=IEA] [GO:0030515 "snoRNA binding" evidence=ISO]
            [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0031120
            "snRNA pseudouridine synthesis" evidence=IEA] [GO:0031429 "box
            H/ACA snoRNP complex" evidence=IEA] [GO:0042254 "ribosome
            biogenesis" evidence=IEA] InterPro:IPR007504 InterPro:IPR021154
            Pfam:PF04410 ProDom:PD020235 MGI:MGI:1930948 GO:GO:0030515
            GO:GO:0015030 GO:GO:0006364 GeneTree:ENSGT00530000063105
            GO:GO:0009982 GO:GO:0031429 GO:GO:0031120 InterPro:IPR009000
            SUPFAM:SSF50447 GO:GO:0001651 eggNOG:COG3277 KO:K11128
            PANTHER:PTHR23237 CTD:54433 OrthoDB:EOG480HZ6 OMA:ELYIDPG
            EMBL:AK021256 EMBL:AK075923 EMBL:BC021873 EMBL:BC048685
            IPI:IPI00110931 IPI:IPI00461325 IPI:IPI00461326 RefSeq:NP_080854.1
            UniGene:Mm.24873 ProteinModelPortal:Q9CY66 SMR:Q9CY66 IntAct:Q9CY66
            STRING:Q9CY66 PhosphoSite:Q9CY66 PaxDb:Q9CY66 PRIDE:Q9CY66
            Ensembl:ENSMUST00000029643 GeneID:68147 KEGG:mmu:68147
            UCSC:uc008rim.2 InParanoid:Q9CY66 ChiTaRS:GAR1 NextBio:326530
            Bgee:Q9CY66 Genevestigator:Q9CY66 GermOnline:ENSMUSG00000028010
            Uniprot:Q9CY66
        Length = 231

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 58/98 (59%), Positives = 72/98 (73%)

Query:    44 EGPPAEVVEVSSFLHACEGDAVTKLTNE--KIPYFNAPIYLQNKTQIGKVDEIFGPINES 101
             +GPP  VV +  F+H CE D V K T E  K+PYFNAP+YL+NK Q+GKVDEIFG + + 
Sbjct:    75 QGPPERVVLLGEFMHPCEDDIVCKCTTEENKVPYFNAPVYLENKEQVGKVDEIFGQLRDF 134

Query:   102 YFSVKMMEGIVATSYSLGDKFYIDPSKLLPLARFLPQP 139
             YFSVK+ E + A+S+    KFYIDP KLLPL RFLP+P
Sbjct:   135 YFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRP 172


>UNIPROTKB|E1C818 [details] [associations]
            symbol:GAR1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0009982 "pseudouridine synthase activity" evidence=IEA]
            [GO:0030515 "snoRNA binding" evidence=IEA] [GO:0031120 "snRNA
            pseudouridine synthesis" evidence=IEA] [GO:0031429 "box H/ACA
            snoRNP complex" evidence=IEA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] InterPro:IPR007504 InterPro:IPR021154 Pfam:PF04410
            ProDom:PD020235 GO:GO:0030515 GO:GO:0042254
            GeneTree:ENSGT00530000063105 GO:GO:0009982 GO:GO:0031429
            GO:GO:0031120 InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR23237
            OMA:ELYIDPG EMBL:AADN02009351 IPI:IPI00586004
            Ensembl:ENSGALT00000032134 Uniprot:E1C818
        Length = 212

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 58/98 (59%), Positives = 71/98 (72%)

Query:    44 EGPPAEVVEVSSFLHACEGDAVTKLTNE--KIPYFNAPIYLQNKTQIGKVDEIFGPINES 101
             +GPP  VV +  F+H CE D V K   E  K+PYFNAP+YL NK QIGKVDEIFG + + 
Sbjct:    59 QGPPERVVLLGEFMHPCEDDLVCKCKTEENKVPYFNAPVYLDNKEQIGKVDEIFGQLRDF 118

Query:   102 YFSVKMMEGIVATSYSLGDKFYIDPSKLLPLARFLPQP 139
             YFSVK+ E + A+S+    KFYIDP+KLLPL RFLP+P
Sbjct:   119 YFSVKLSENMRASSFKKMQKFYIDPAKLLPLQRFLPRP 156


>UNIPROTKB|F1S134 [details] [associations]
            symbol:F1S134 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0031429
            "box H/ACA snoRNP complex" evidence=IEA] [GO:0031120 "snRNA
            pseudouridine synthesis" evidence=IEA] [GO:0030515 "snoRNA binding"
            evidence=IEA] [GO:0009982 "pseudouridine synthase activity"
            evidence=IEA] InterPro:IPR007504 InterPro:IPR021154 Pfam:PF04410
            ProDom:PD020235 GO:GO:0030515 GO:GO:0042254
            GeneTree:ENSGT00530000063105 GO:GO:0009982 GO:GO:0031429
            GO:GO:0031120 InterPro:IPR009000 SUPFAM:SSF50447 OMA:NVKIPYF
            PANTHER:PTHR23237 Ensembl:ENSSSCT00000010005 Uniprot:F1S134
        Length = 167

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 58/99 (58%), Positives = 73/99 (73%)

Query:    44 EGPPA-EVVEVSSFLHACEGDAVTKLTNE--KIPYFNAPIYLQNKTQIGKVDEIFGPINE 100
             +GPP  E++ +  FLH CE D V K T +  K+PYFNAP+YL+NK QIGKVDEIFG + +
Sbjct:    15 QGPPEREILILGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQLRD 74

Query:   101 SYFSVKMMEGIVATSYSLGDKFYIDPSKLLPLARFLPQP 139
              YFSVK+ E + A+S+    KFYIDP KLLPL RFLP+P
Sbjct:    75 FYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRP 113


>ZFIN|ZDB-GENE-040426-893 [details] [associations]
            symbol:gar1 "GAR1 ribonucleoprotein homolog
            (yeast)" species:7955 "Danio rerio" [GO:0031120 "snRNA
            pseudouridine synthesis" evidence=IEA] [GO:0042254 "ribosome
            biogenesis" evidence=IEA] [GO:0030515 "snoRNA binding"
            evidence=IEA] [GO:0031429 "box H/ACA snoRNP complex" evidence=IEA]
            [GO:0009982 "pseudouridine synthase activity" evidence=IEA]
            [GO:0060216 "definitive hemopoiesis" evidence=IGI;IMP] [GO:0006364
            "rRNA processing" evidence=IEA;IMP] [GO:0030529 "ribonucleoprotein
            complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR007504
            InterPro:IPR021154 Pfam:PF04410 ProDom:PD020235
            ZFIN:ZDB-GENE-040426-893 GO:GO:0030515 GO:GO:0006364 GO:GO:0009982
            GO:GO:0031429 GO:GO:0031120 InterPro:IPR009000 SUPFAM:SSF50447
            GO:GO:0060216 eggNOG:COG3277 KO:K11128 PANTHER:PTHR23237
            EMBL:BC045900 IPI:IPI00489786 RefSeq:NP_957269.1 UniGene:Dr.84813
            ProteinModelPortal:Q7ZVE0 STRING:Q7ZVE0 PRIDE:Q7ZVE0 GeneID:393950
            KEGG:dre:393950 CTD:54433 InParanoid:Q7ZVE0 OrthoDB:EOG480HZ6
            NextBio:20814922 ArrayExpress:Q7ZVE0 Bgee:Q7ZVE0 Uniprot:Q7ZVE0
        Length = 226

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 56/97 (57%), Positives = 70/97 (72%)

Query:    45 GPPAEVVEVSSFLHACEGDAVTKLTNE--KIPYFNAPIYLQNKTQIGKVDEIFGPINESY 102
             GPP  VV +  F+H CE + V K   E  K+PYFNAP+YL+NK QIGKVDEIFG + + Y
Sbjct:    59 GPPEYVVALGEFMHPCEDEIVCKCVTEENKVPYFNAPVYLENKEQIGKVDEIFGQLRDFY 118

Query:   103 FSVKMMEGIVATSYSLGDKFYIDPSKLLPLARFLPQP 139
             FSVK+ + + A+S+    KFYIDP KLLPL RFLP+P
Sbjct:   119 FSVKLSDNMKASSFKKLQKFYIDPMKLLPLQRFLPRP 155


>WB|WBGene00022046 [details] [associations]
            symbol:Y66H1A.4 species:6239 "Caenorhabditis elegans"
            [GO:0030515 "snoRNA binding" evidence=IEA] [GO:0031120 "snRNA
            pseudouridine synthesis" evidence=IEA] [GO:0042254 "ribosome
            biogenesis" evidence=IEA] [GO:0009982 "pseudouridine synthase
            activity" evidence=IEA] [GO:0031429 "box H/ACA snoRNP complex"
            evidence=IEA] [GO:0040010 "positive regulation of growth rate"
            evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040002
            "collagen and cuticulin-based cuticle development" evidence=IMP]
            [GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
            InterPro:IPR007504 InterPro:IPR021154 Pfam:PF04410 ProDom:PD020235
            GO:GO:0006898 GO:GO:0040010 GO:GO:0030515 GO:GO:0000003
            GO:GO:0040002 GO:GO:0006364 GeneTree:ENSGT00530000063105
            GO:GO:0009982 GO:GO:0031429 GO:GO:0031120 InterPro:IPR009000
            SUPFAM:SSF50447 EMBL:FO081659 PIR:T33925 RefSeq:NP_499927.2
            ProteinModelPortal:Q9TYK1 SMR:Q9TYK1 STRING:Q9TYK1 PaxDb:Q9TYK1
            EnsemblMetazoa:Y66H1A.4.1 EnsemblMetazoa:Y66H1A.4.2 GeneID:176870
            KEGG:cel:CELE_Y66H1A.4 UCSC:Y66H1A.4.1 CTD:176870 WormBase:Y66H1A.4
            eggNOG:COG3277 InParanoid:Q9TYK1 KO:K11128 OMA:NVKIPYF
            NextBio:894376 PANTHER:PTHR23237 Uniprot:Q9TYK1
        Length = 244

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 53/95 (55%), Positives = 67/95 (70%)

Query:    44 EGPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYF 103
             +GPP EVV V  F H C+ D V   T+ KIPYFNAPIY +NK Q+GK+DEIFG   E+ F
Sbjct:    54 QGPPEEVVLVGVFSHQCQDDIVCNNTSGKIPYFNAPIYFKNKEQVGKIDEIFGSPGENGF 113

Query:   104 SVKMMEGIVATSYSLGDKFYIDPSKLLPLARFLPQ 138
             SV + +G+ A+S+    + YIDP KLLP+ RFLPQ
Sbjct:   114 SVTLSQGVKASSFEPESQLYIDPGKLLPVDRFLPQ 148


>FB|FBgn0011824 [details] [associations]
            symbol:CG4038 species:7227 "Drosophila melanogaster"
            [GO:0030532 "small nuclear ribonucleoprotein complex" evidence=ISS]
            [GO:0031120 "snRNA pseudouridine synthesis" evidence=IEA]
            [GO:0009982 "pseudouridine synthase activity" evidence=IEA]
            [GO:0031429 "box H/ACA snoRNP complex" evidence=IEA] [GO:0005732
            "small nucleolar ribonucleoprotein complex" evidence=ISS]
            [GO:0006364 "rRNA processing" evidence=ISS] [GO:0031118 "rRNA
            pseudouridine synthesis" evidence=ISS] [GO:0030515 "snoRNA binding"
            evidence=ISS] [GO:0030559 "rRNA pseudouridylation guide activity"
            evidence=ISS] [GO:0022008 "neurogenesis" evidence=IMP]
            InterPro:IPR007504 InterPro:IPR021154 Pfam:PF04410 ProDom:PD020235
            EMBL:AE013599 GO:GO:0022008 GO:GO:0030515
            GeneTree:ENSGT00530000063105 GO:GO:0009982 GO:GO:0031429
            GO:GO:0031118 GO:GO:0031120 InterPro:IPR009000 SUPFAM:SSF50447
            GO:GO:0005732 eggNOG:COG3277 KO:K11128 PANTHER:PTHR23237
            EMBL:X71975 EMBL:AY075501 PIR:S49193 RefSeq:NP_477043.1
            UniGene:Dm.22864 ProteinModelPortal:Q7KVQ0 SMR:Q7KVQ0 IntAct:Q7KVQ0
            MINT:MINT-931791 STRING:Q7KVQ0 PaxDb:Q7KVQ0 PRIDE:Q7KVQ0
            EnsemblMetazoa:FBtr0071639 GeneID:37397 KEGG:dme:Dmel_CG4038
            FlyBase:FBgn0011824 InParanoid:Q7KVQ0 OMA:YANSFKP OrthoDB:EOG4K98VR
            PhylomeDB:Q7KVQ0 GenomeRNAi:37397 NextBio:803432 Bgee:Q7KVQ0
            GermOnline:CG4038 Uniprot:Q7KVQ0
        Length = 237

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 44/95 (46%), Positives = 69/95 (72%)

Query:    45 GPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFS 104
             GPP  V+ + +++++C+ D V K+  + +PYFNAPI+L+NK Q+GK+DEIFG + +   S
Sbjct:    64 GPPERVIPLGNYVYSCQNDLVCKVDIQDVPYFNAPIFLENKEQVGKIDEIFGTVRDYSVS 123

Query:   105 VKMMEGIVATSYSLGDKFYIDPSKLLPLARFLPQP 139
             +K+ + + A S+    K +IDP KLLP+ARFLP+P
Sbjct:   124 IKLSDNVYANSFKPNQKLFIDPGKLLPIARFLPKP 158


>GENEDB_PFALCIPARUM|PF13_0051 [details] [associations]
            symbol:PF13_0051 "snornp protein gar1
            homologue, putative" species:5833 "Plasmodium falciparum"
            [GO:0009451 "RNA modification" evidence=ISS] InterPro:IPR007504
            InterPro:IPR021154 Pfam:PF04410 ProDom:PD020235 GO:GO:0030515
            GO:GO:0042254 EMBL:AL844509 GO:GO:0009982 GO:GO:0031429
            GO:GO:0031120 GO:GO:0009451 InterPro:IPR009000 SUPFAM:SSF50447
            KO:K11128 PANTHER:PTHR23237 RefSeq:XP_001349823.1
            ProteinModelPortal:Q8I700 EnsemblProtists:PF13_0051:mRNA
            GeneID:814030 KEGG:pfa:PF13_0051 EuPathDB:PlasmoDB:PF3D7_1309500
            HOGENOM:HOG000280804 ProtClustDB:CLSZ2733762 Uniprot:Q8I700
        Length = 209

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 52/91 (57%), Positives = 63/91 (69%)

Query:    55 SFLHACEGDAVTKLTNEK-IPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVA 113
             +F   CE D + K   E  +PYFN  I+L+NK +IGKVDEI GPINE YFSVK+ EGI A
Sbjct:    30 TFYKHCENDLLLKNELENLVPYFNGRIFLENKEEIGKVDEILGPINEFYFSVKLKEGIRA 89

Query:   114 TSYSLGDKFYIDPSKLLPLARFLPQPKCSVS 144
              S+S    F+ID S+ LPL+RFLPQ K S S
Sbjct:    90 KSFSSDTHFFIDKSQTLPLSRFLPQEKNSQS 120


>UNIPROTKB|Q8I700 [details] [associations]
            symbol:PF13_0051 "Snornp protein gar1 homologue, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0009451 "RNA
            modification" evidence=ISS] InterPro:IPR007504 InterPro:IPR021154
            Pfam:PF04410 ProDom:PD020235 GO:GO:0030515 GO:GO:0042254
            EMBL:AL844509 GO:GO:0009982 GO:GO:0031429 GO:GO:0031120
            GO:GO:0009451 InterPro:IPR009000 SUPFAM:SSF50447 KO:K11128
            PANTHER:PTHR23237 RefSeq:XP_001349823.1 ProteinModelPortal:Q8I700
            EnsemblProtists:PF13_0051:mRNA GeneID:814030 KEGG:pfa:PF13_0051
            EuPathDB:PlasmoDB:PF3D7_1309500 HOGENOM:HOG000280804
            ProtClustDB:CLSZ2733762 Uniprot:Q8I700
        Length = 209

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 52/91 (57%), Positives = 63/91 (69%)

Query:    55 SFLHACEGDAVTKLTNEK-IPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVA 113
             +F   CE D + K   E  +PYFN  I+L+NK +IGKVDEI GPINE YFSVK+ EGI A
Sbjct:    30 TFYKHCENDLLLKNELENLVPYFNGRIFLENKEEIGKVDEILGPINEFYFSVKLKEGIRA 89

Query:   114 TSYSLGDKFYIDPSKLLPLARFLPQPKCSVS 144
              S+S    F+ID S+ LPL+RFLPQ K S S
Sbjct:    90 KSFSSDTHFFIDKSQTLPLSRFLPQEKNSQS 120


>UNIPROTKB|F6XGZ6 [details] [associations]
            symbol:GAR1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
            [GO:0031429 "box H/ACA snoRNP complex" evidence=IEA] [GO:0031120
            "snRNA pseudouridine synthesis" evidence=IEA] [GO:0030515 "snoRNA
            binding" evidence=IEA] [GO:0009982 "pseudouridine synthase
            activity" evidence=IEA] InterPro:IPR007504 InterPro:IPR021154
            Pfam:PF04410 ProDom:PD020235 GO:GO:0030515 GO:GO:0042254
            GeneTree:ENSGT00530000063105 GO:GO:0009982 GO:GO:0031429
            GO:GO:0031120 InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR23237
            EMBL:AAEX03016821 Ensembl:ENSCAFT00000018244 Uniprot:F6XGZ6
        Length = 247

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 43/75 (57%), Positives = 55/75 (73%)

Query:    44 EGPPAEVVEVSSFLHACEGDAVTKLTNE--KIPYFNAPIYLQNKTQIGKVDEIFGPINES 101
             +GPP  VV +  FLH CE D V K T +  K+PYFNAP+YL+NK QIGKVDEIFG + + 
Sbjct:    58 QGPPEHVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPVYLENKEQIGKVDEIFGQLRDF 117

Query:   102 YFSVKMMEGIVATSY 116
             YFSVK+ E + A+S+
Sbjct:   118 YFSVKLSENMKASSF 132


>DICTYBASE|DDB_G0279013 [details] [associations]
            symbol:nola1 "Gar1 family protein" species:44689
            "Dictyostelium discoideum" [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0031429 "box H/ACA snoRNP complex" evidence=IEA]
            [GO:0031120 "snRNA pseudouridine synthesis" evidence=IEA]
            [GO:0030515 "snoRNA binding" evidence=IEA] [GO:0009982
            "pseudouridine synthase activity" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] [GO:0006364 "rRNA
            processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR007504 InterPro:IPR021154 Pfam:PF04410 ProDom:PD020235
            dictyBase:DDB_G0279013 GenomeReviews:CM000152_GR EMBL:AAFI02000026
            GO:GO:0030515 GO:GO:0006364 GO:GO:0009982 GO:GO:0031429
            GO:GO:0031120 InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG3277
            KO:K11128 PANTHER:PTHR23237 RefSeq:XP_641906.1
            ProteinModelPortal:Q54XE6 STRING:Q54XE6 PRIDE:Q54XE6
            EnsemblProtists:DDB0235390 GeneID:8621829 KEGG:ddi:DDB_G0279013
            OMA:GYASGEN ProtClustDB:CLSZ2846824 Uniprot:Q54XE6
        Length = 230

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 43/93 (46%), Positives = 60/93 (64%)

Query:    49 EVVEVSSFLHACEGDAVTKLT-NEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKM 107
             E +E+  F H CE   V KLT  E++P FN  +   +K  IG VDEIFGPIN+ +FSVK+
Sbjct:    61 ENIEIGVFSHVCEEQIVCKLTATEQVPKFNCKVLSSSKNTIGSVDEIFGPINKVFFSVKL 120

Query:   108 MEGIVATSYSLGDKFYIDPSKLLPLARFLPQPK 140
               G+ ATS+   DK ++D + +LP+  FL +PK
Sbjct:   121 DSGVQATSFKENDKIFVDSNSVLPIKIFLEEPK 153


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.137   0.420    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      147       108   0.00091  102 3  11 22  0.46    30
                                                     29  0.40    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  23
  No. of states in DFA:  568 (60 KB)
  Total size of DFA:  119 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.08u 0.10s 12.18t   Elapsed:  00:00:01
  Total cpu time:  12.08u 0.11s 12.19t   Elapsed:  00:00:01
  Start:  Fri May 10 16:31:38 2013   End:  Fri May 10 16:31:39 2013
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the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data
