Query 032121
Match_columns 147
No_of_seqs 123 out of 184
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 15:55:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032121.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032121hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wp0a1 c.47.1.10 (A:138-297) 37.1 4.8 0.00035 26.1 0.8 17 2-18 10-26 (160)
2 d2b7ka1 c.47.1.10 (A:111-279) 33.2 4.7 0.00034 25.9 0.2 17 2-18 16-32 (169)
3 d1wzaa1 b.71.1.1 (A:437-515) B 26.3 11 0.00077 23.7 1.0 20 3-22 33-52 (79)
4 d1xzoa1 c.47.1.10 (A:3-174) Th 24.0 9.2 0.00067 25.9 0.4 18 2-19 21-38 (172)
5 d1epba_ b.60.1.1 (A:) Retinoic 22.8 76 0.0055 20.2 5.2 17 4-20 3-19 (160)
6 d1gt1a_ b.60.1.1 (A:) Odorant- 22.4 92 0.0067 19.9 8.7 22 3-24 5-26 (158)
7 d1b56a_ b.60.1.2 (A:) Epiderma 20.5 17 0.0013 24.3 1.3 17 7-23 2-18 (133)
8 d1e5pa_ b.60.1.1 (A:) Aphrodis 20.3 16 0.0011 23.9 1.0 18 7-24 1-18 (149)
9 d2ag4a1 b.95.1.1 (A:2-164) Gan 17.8 1.5E+02 0.011 20.3 7.5 48 47-98 8-59 (163)
10 d1rk8c_ b.72.3.1 (C:) Pym (Wit 15.9 20 0.0015 19.3 0.6 6 10-15 17-22 (33)
No 1
>d1wp0a1 c.47.1.10 (A:138-297) Thioredoxin-like protein Sco1 (YpmQ), soluble domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.11 E-value=4.8 Score=26.06 Aligned_cols=17 Identities=35% Similarity=0.520 Sum_probs=15.4
Q ss_pred CCCCCccCCCceEEEEE
Q 032121 2 GEPIDLVKLDGTWRLQY 18 (147)
Q Consensus 2 ~~~l~~~lL~G~WrLlY 18 (147)
|++.+++-+.|+|.|+|
T Consensus 10 G~~vsl~d~~GK~vll~ 26 (160)
T d1wp0a1 10 GERKTDKDYLGQWLLIY 26 (160)
T ss_dssp SCEEEGGGGTTSEEEEE
T ss_pred CCEEcHHHhCCCEEEEE
Confidence 77888999999999997
No 2
>d2b7ka1 c.47.1.10 (A:111-279) Thioredoxin-like protein Sco1 (YpmQ), soluble domain {Baker's yeast(Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.24 E-value=4.7 Score=25.87 Aligned_cols=17 Identities=24% Similarity=0.454 Sum_probs=15.1
Q ss_pred CCCCCccCCCceEEEEE
Q 032121 2 GEPIDLVKLDGTWRLQY 18 (147)
Q Consensus 2 ~~~l~~~lL~G~WrLlY 18 (147)
|++.+++.+.|+|.|++
T Consensus 16 G~~vsl~~~~GK~vli~ 32 (169)
T d2b7ka1 16 GNEFTEKNLLGKFSIIY 32 (169)
T ss_dssp SCEEEGGGGTTSCEEEE
T ss_pred CCEECHHHHCCCEEEEE
Confidence 67788999999999986
No 3
>d1wzaa1 b.71.1.1 (A:437-515) Bacterial alpha-Amylase {Halothermothrix orenii [TaxId: 31909]}
Probab=26.31 E-value=11 Score=23.72 Aligned_cols=20 Identities=25% Similarity=0.690 Sum_probs=15.8
Q ss_pred CCCCccCCCceEEEEEecch
Q 032121 3 EPIDLVKLDGTWRLQYTSAP 22 (147)
Q Consensus 3 ~~l~~~lL~G~WrLlYTTa~ 22 (147)
.|.....-+|+|.|+|.|..
T Consensus 33 rpvkikvasgnwtllfnsgd 52 (79)
T d1wzaa1 33 RPVKIKVASGNWTLLFNSGD 52 (79)
T ss_dssp SCEEEEEESSCEEEEEESSS
T ss_pred CcEEEEEecCcEEEEEccCC
Confidence 45566677899999998865
No 4
>d1xzoa1 c.47.1.10 (A:3-174) Thioredoxin-like protein Sco1 (YpmQ), soluble domain {Bacillus subtilis [TaxId: 1423]}
Probab=24.02 E-value=9.2 Score=25.94 Aligned_cols=18 Identities=28% Similarity=0.340 Sum_probs=16.0
Q ss_pred CCCCCccCCCceEEEEEe
Q 032121 2 GEPIDLVKLDGTWRLQYT 19 (147)
Q Consensus 2 ~~~l~~~lL~G~WrLlYT 19 (147)
|++++++-+.|+|.|+|=
T Consensus 21 G~~vsl~d~~Gk~vvl~F 38 (172)
T d1xzoa1 21 GKNVSLESLKGEVWLADF 38 (172)
T ss_dssp SCEEETGGGTTCCEEEEE
T ss_pred CCEEcHHHhCCCEEEEEE
Confidence 778899999999999984
No 5
>d1epba_ b.60.1.1 (A:) Retinoic acid-binding protein {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=22.83 E-value=76 Score=20.25 Aligned_cols=17 Identities=24% Similarity=0.331 Sum_probs=14.1
Q ss_pred CCCccCCCceEEEEEec
Q 032121 4 PIDLVKLDGTWRLQYTS 20 (147)
Q Consensus 4 ~l~~~lL~G~WrLlYTT 20 (147)
..|++.+.|+|-.++-.
T Consensus 3 nfd~~k~~G~Wy~ia~a 19 (160)
T d1epba_ 3 DFDISKFLGFWYEIAFA 19 (160)
T ss_dssp SCCGGGTCEEEEEEEEE
T ss_pred CCChHHcCEEEEEEEEE
Confidence 57899999999888743
No 6
>d1gt1a_ b.60.1.1 (A:) Odorant-binding protein {Cow (Bos taurus) [TaxId: 9913]}
Probab=22.44 E-value=92 Score=19.86 Aligned_cols=22 Identities=27% Similarity=0.614 Sum_probs=18.3
Q ss_pred CCCCccCCCceEEEEEecchhh
Q 032121 3 EPIDLVKLDGTWRLQYTSAPDV 24 (147)
Q Consensus 3 ~~l~~~lL~G~WrLlYTTa~el 24 (147)
...|++.+.|+|-.++..+...
T Consensus 5 ~~~d~~k~~G~Wy~ia~As~~~ 26 (158)
T d1gt1a_ 5 AEQNLSELSGPWRTVYIGSTNP 26 (158)
T ss_dssp CCCCCGGGCEEEEEEEEEESSG
T ss_pred ccCChHHCCEEeEEEEEEECCh
Confidence 3578999999999999877753
No 7
>d1b56a_ b.60.1.2 (A:) Epidermal fatty acid binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.51 E-value=17 Score=24.34 Aligned_cols=17 Identities=35% Similarity=0.716 Sum_probs=12.4
Q ss_pred ccCCCceEEEEEecchh
Q 032121 7 LVKLDGTWRLQYTSAPD 23 (147)
Q Consensus 7 ~~lL~G~WrLlYTTa~e 23 (147)
.+.|+|+|+|.=+-..|
T Consensus 2 ~~~l~Gtwkl~~seNfd 18 (133)
T d1b56a_ 2 VQQLEGRWRLVDSKGFD 18 (133)
T ss_dssp GGGGCEEEEEEECCSHH
T ss_pred hHHceEEEEEEeccCHH
Confidence 47899999998554433
No 8
>d1e5pa_ b.60.1.1 (A:) Aphrodisin, a sex pheromone {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=20.30 E-value=16 Score=23.92 Aligned_cols=18 Identities=22% Similarity=0.541 Sum_probs=14.9
Q ss_pred ccCCCceEEEEEecchhh
Q 032121 7 LVKLDGTWRLQYTSAPDV 24 (147)
Q Consensus 7 ~~lL~G~WrLlYTTa~el 24 (147)
++.+.|+|..++-.+...
T Consensus 1 ~skisG~W~~ia~As~~~ 18 (149)
T d1e5pa_ 1 FAELQGKWYTIVIAADNL 18 (149)
T ss_dssp CGGGCEECEEEEEEESSG
T ss_pred CCcccEEeEEEEEEECCh
Confidence 468999999999987654
No 9
>d2ag4a1 b.95.1.1 (A:2-164) Ganglioside M2 (gm2) activator {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.80 E-value=1.5e+02 Score=20.32 Aligned_cols=48 Identities=19% Similarity=0.207 Sum_probs=30.8
Q ss_pred eeecCCCCceEEEEEEecCCccccccCceeEEEEEEEEE----cCCceEEEEEEEE
Q 032121 47 ECRDKSDGGVICNVVRWSVPPLLEKEEGATLVVSAKFDV----VSVRNIYLQFEEV 98 (147)
Q Consensus 47 D~~~~~~~~~v~Nvv~~~~P~~~~~~~G~~l~V~A~fev----~s~~RV~v~Fe~~ 98 (147)
||.+.++.-++.++.-.+.|+.. |..++++|+.++ .++-.+.+..++.
T Consensus 8 nC~~~~d~~~i~~l~l~PdP~~~----gg~lti~~~~~~~~~i~~~~~v~l~v~k~ 59 (163)
T d2ag4a1 8 NCDEGKDPAVIRSLTLEPDPIVV----PGNVTLSVVGSTSVPLSSPLKVDLVLEKE 59 (163)
T ss_dssp ESSTTTCSEEEEEEEEESSSEEE----SEEEEEEEEEEESSCBCSSCEEEEEEEEE
T ss_pred cCCCCCCceEEeeEEEecCCcCC----CceEEEEEEEEEeeecCCCcEEEEEEEEE
Confidence 57655554444444445666532 458889888887 4667787777764
No 10
>d1rk8c_ b.72.3.1 (C:) Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=15.89 E-value=20 Score=19.29 Aligned_cols=6 Identities=83% Similarity=1.686 Sum_probs=4.8
Q ss_pred CCceEE
Q 032121 10 LDGTWR 15 (147)
Q Consensus 10 L~G~Wr 15 (147)
=||+||
T Consensus 17 pDGtWR 22 (33)
T d1rk8c_ 17 PDGTWR 22 (33)
T ss_dssp TTSCEE
T ss_pred CCCccc
Confidence 488997
Done!