Query 032122
Match_columns 147
No_of_seqs 80 out of 82
Neff 3.1
Searched_HMMs 29240
Date Mon Mar 25 15:56:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032122.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032122hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kpa_A Probable ubiquitin fold 100.0 1.7E-71 5.9E-76 441.1 10.8 131 3-134 8-138 (168)
2 2z6o_A UFM1-conjugating enzyme 100.0 2.8E-59 9.5E-64 372.5 9.5 131 3-134 6-136 (172)
3 2h2y_A Ubiquitin-conjugating e 99.7 2.2E-17 7.6E-22 123.1 11.5 93 29-129 20-118 (136)
4 2fo3_A Ubiquitin-conjugating e 99.7 1.6E-17 5.5E-22 121.8 10.4 91 31-129 8-104 (125)
5 2a7l_A Hypothetical ubiquitin- 99.7 1.1E-17 3.7E-22 125.7 8.2 91 31-129 24-123 (136)
6 2c2v_B Ubiquitin-conjugating e 99.7 3.2E-17 1.1E-21 123.9 10.3 92 30-129 6-102 (154)
7 1zdn_A Ubiquitin-conjugating e 99.7 4.9E-17 1.7E-21 123.3 11.1 94 28-129 12-110 (158)
8 2ayv_A Ubiquitin-conjugating e 99.7 4E-17 1.4E-21 125.6 10.7 93 29-129 21-118 (166)
9 4gpr_A Ubiquitin-conjugating e 99.7 5.1E-17 1.7E-21 122.2 10.8 91 31-129 6-101 (151)
10 1z2u_A Ubiquitin-conjugating e 99.7 2.6E-17 8.8E-22 123.5 8.9 91 31-129 6-101 (150)
11 2r0j_A Ubiquitin carrier prote 99.7 2.8E-17 9.7E-22 123.4 8.7 90 32-129 4-98 (149)
12 2c4o_A Ubiquitin-conjugating e 99.7 5.5E-17 1.9E-21 124.5 10.1 94 28-129 18-116 (165)
13 3h8k_A Ubiquitin-conjugating e 99.7 7.7E-17 2.6E-21 122.2 10.7 92 30-129 4-114 (164)
14 1jat_A Ubiquitin-conjugating e 99.7 3.5E-17 1.2E-21 123.5 8.8 92 30-129 6-102 (155)
15 2e2c_A Ubiquitin conjugating e 99.7 7E-17 2.4E-21 122.0 10.3 93 29-129 9-106 (156)
16 1fxt_A Ubiquitin-conjugating e 99.7 6.3E-17 2.2E-21 121.2 9.3 92 31-129 3-100 (149)
17 2ucz_A UBC7, ubiquitin conjuga 99.7 1.6E-16 5.4E-21 120.8 10.8 92 30-129 5-115 (165)
18 3k9o_A Ubiquitin-conjugating e 99.7 4.9E-17 1.7E-21 127.4 8.1 95 31-129 7-106 (201)
19 1yh2_A HSPC150 protein similar 99.7 1.8E-16 6E-21 121.6 10.7 92 30-129 5-105 (169)
20 1yrv_A Ubiquitin-conjugating l 99.7 9.6E-17 3.3E-21 124.0 9.1 94 29-129 23-123 (169)
21 2aak_A UBC1, ubiquitin conjuga 99.7 1.2E-16 4.1E-21 120.1 8.9 92 30-129 5-101 (152)
22 3rcz_B SUMO-conjugating enzyme 99.7 1.1E-16 3.9E-21 122.8 8.2 94 28-129 9-114 (163)
23 2bep_A Ubiquitin-conjugating e 99.7 3.4E-16 1.2E-20 118.6 10.0 96 30-129 9-109 (159)
24 2f4z_A Tgtwinscan_2721 - E2 do 99.7 1.8E-16 6.3E-21 125.2 8.5 108 22-129 25-143 (193)
25 3e46_A Ubiquitin-conjugating e 99.7 2E-16 7E-21 129.9 9.0 114 12-129 34-158 (253)
26 4ds2_A Ubiquitin-conjugating e 99.7 2.8E-16 9.5E-21 120.1 8.9 98 31-129 10-119 (167)
27 2pwq_A Ubiquitin conjugating e 99.7 3.7E-16 1.3E-20 125.5 10.0 95 28-129 22-121 (216)
28 2y9m_A Ubiquitin-conjugating e 99.7 6.4E-16 2.2E-20 119.0 10.9 100 30-129 7-118 (172)
29 3bzh_A Ubiquitin-conjugating e 99.7 6.3E-16 2.1E-20 122.1 11.0 94 28-129 47-145 (194)
30 2awf_A Ubiquitin-conjugating e 99.7 5.9E-16 2E-20 119.4 10.2 94 28-129 16-128 (172)
31 1ayz_A UBC2, ubiquitin-conjuga 99.6 4.1E-16 1.4E-20 120.3 8.9 91 31-129 6-101 (169)
32 3rz3_A Ubiquitin-conjugating e 99.6 1.2E-15 4.2E-20 118.5 10.8 92 30-129 8-118 (183)
33 1i7k_A Ubiquitin-conjugating e 99.6 7.3E-16 2.5E-20 120.4 8.5 96 26-129 27-127 (179)
34 2gjd_A Ubiquitin-conjugating e 99.6 9.8E-16 3.3E-20 116.1 8.3 91 31-129 6-108 (157)
35 2a4d_A Ubiquitin-conjugating e 99.6 2.1E-15 7E-20 116.4 9.5 93 30-129 26-129 (160)
36 1tte_A Ubiquitin-conjugating e 99.6 1.7E-15 5.7E-20 121.6 9.2 92 31-129 4-101 (215)
37 2f4w_A Ubiquitin-conjugating e 99.6 1.2E-15 4.1E-20 119.5 8.2 92 28-129 13-112 (187)
38 1jat_B Ubiquitin-conjugating e 99.6 2E-15 6.7E-20 112.3 8.7 93 31-129 8-109 (138)
39 1wzv_A Ubiquitin-conjugating e 99.6 4.8E-15 1.7E-19 111.6 10.7 91 31-129 6-102 (155)
40 1y8x_A Ubiquitin-conjugating e 99.6 4.2E-15 1.4E-19 113.4 9.5 90 29-129 6-101 (160)
41 1zuo_A Hypothetical protein LO 99.6 6.3E-16 2.2E-20 121.2 5.0 97 29-129 27-141 (186)
42 2onu_A Ubiquitin-conjugating e 99.6 7.7E-16 2.6E-20 116.6 4.8 88 32-129 5-97 (152)
43 2grr_A Ubiquitin-conjugating e 99.6 3E-15 1E-19 113.8 7.7 92 30-129 8-111 (161)
44 2hlw_A Ubiquitin-conjugating e 99.6 5.2E-15 1.8E-19 114.7 8.3 93 30-129 36-139 (170)
45 3fn1_B NEDD8-conjugating enzym 99.6 7E-15 2.4E-19 111.9 8.6 92 29-129 14-117 (167)
46 2nvu_C NEDD8-conjugating enzym 99.6 1.1E-14 3.7E-19 113.5 9.1 91 28-129 25-121 (180)
47 3o2u_A NEDD8-conjugating enzym 99.6 8.4E-15 2.9E-19 114.9 8.0 91 29-129 29-130 (190)
48 2z5d_A Ubiquitin-conjugating e 99.5 6.7E-15 2.3E-19 115.3 6.7 90 29-129 25-119 (179)
49 2q0v_A Ubiquitin-conjugating e 99.5 2.5E-14 8.5E-19 109.5 9.1 93 30-129 22-124 (156)
50 1yf9_A Ubiquitin carrier prote 99.5 1.1E-14 3.6E-19 112.7 7.0 89 30-129 13-106 (171)
51 4ddg_A Ubiquitin-conjugating e 99.5 2E-14 6.7E-19 122.8 9.0 91 31-129 5-100 (399)
52 1c4z_D UBCH7, ubiquitin conjug 99.5 1.2E-14 4.1E-19 109.4 5.7 90 32-129 5-100 (154)
53 3ceg_A Baculoviral IAP repeat- 99.5 1.3E-13 4.5E-18 117.3 11.5 104 22-129 69-189 (323)
54 3r3q_A Suppressor protein STP2 98.0 9.9E-06 3.4E-10 63.1 5.5 64 63-127 57-139 (162)
55 3obq_A Tumor susceptibility ge 97.1 0.00037 1.3E-08 53.4 3.9 63 63-126 51-120 (146)
56 1ukx_A GCN2, GCN2 EIF2alpha ki 94.8 0.12 4.1E-06 36.8 7.2 22 81-102 63-84 (137)
57 2ebm_A RWD domain-containing p 94.2 0.031 1.1E-06 39.5 3.0 23 81-103 55-77 (128)
58 2yz0_A Serine/threonine-protei 93.4 0.054 1.8E-06 38.8 3.1 25 80-104 61-85 (138)
59 2ebk_A RWD domain-containing p 93.2 0.052 1.8E-06 38.6 2.7 23 81-103 56-78 (128)
60 2day_A Ring finger protein 25; 93.1 0.061 2.1E-06 38.0 2.9 24 81-104 59-82 (128)
61 2dax_A Protein C21ORF6; RWD do 93.0 0.056 1.9E-06 39.7 2.7 24 81-104 73-96 (152)
62 2daw_A RWD domain containing p 91.5 0.12 4.1E-06 38.5 2.9 22 82-103 76-97 (154)
63 3zqs_A E3 ubiquitin-protein li 74.7 3 0.0001 33.1 4.0 45 54-101 14-58 (186)
64 3tgv_A Heme-binding protein HU 41.8 32 0.0011 24.5 4.1 64 33-121 2-65 (148)
65 3t98_B Nucleoporin NUP58/NUP45 36.7 22 0.00077 25.1 2.6 16 30-45 73-88 (93)
66 2blf_B SORB, sulfite\:cytochro 25.0 93 0.0032 20.1 3.9 26 23-48 43-80 (81)
67 3dwv_A Glutathione peroxidase- 20.9 54 0.0018 23.2 2.3 39 93-136 22-62 (187)
68 3mi6_A Alpha-galactosidase; NE 20.8 2.8E+02 0.0096 25.9 7.5 76 30-114 618-694 (745)
69 1bwd_A ADT, protein (inosamine 20.5 59 0.002 26.6 2.7 31 17-48 45-75 (348)
70 1rjt_A Small inducible cytokin 20.5 45 0.0015 21.8 1.6 23 97-121 33-55 (73)
No 1
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=100.00 E-value=1.7e-71 Score=441.10 Aligned_cols=131 Identities=58% Similarity=1.164 Sum_probs=126.0
Q ss_pred CCCchhhhhhcccceeeccCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeeeeeccccee
Q 032122 3 GWDPNTKSTLTQIPLLSTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWYVHNLLKYE 82 (147)
Q Consensus 3 ~~d~~t~~~~~~ipl~~~~agprd~~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~~~~~~~ye 82 (147)
-|+++.+++|++||||||+|||||+++|++||||||+|||+||++||++|||||+++| |++||+|+|+|||+|++.+|+
T Consensus 8 ~~~~~~~~~~~~ipll~t~agPrd~~~w~~RlkeEy~alI~yv~~nK~~d~dWf~~~s-n~~GT~W~G~cw~~~~~~kye 86 (168)
T 3kpa_A 8 HMEPSVKESVSRIPLLKTKAGPRDGDKWTARLKEEYASLITYVEHNKASDSHWFHLES-NPQGTRWYGTCWTYYKNEKYE 86 (168)
T ss_dssp ----CHHHHHTTSCCCCCCCCTTSTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEE-CTTSCEEEEEEEEEETTEEEE
T ss_pred ccChHHHHHHhhCceeeccCCCCCHHHHHHHHHHHHHHHHHHHHhcccccCCeeeecC-CCCCCcccCccceeeccceeE
Confidence 4789999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred EEEEEecCCCCCCCCCeeecCCCCCcccccccCceeeecCCcccccccCCce
Q 032122 83 FDLQFDIPVTYPATAPELELPQLDGKTQKMYRGGKICLTVHFKPLWAKNWYF 134 (147)
Q Consensus 83 F~lefdIP~tYP~tpPeI~fPeldgkt~kmYrgGkICL~dHf~PlW~~n~p~ 134 (147)
|+|+|+||++||++||+|+||++||+|+||||||+||||+||+|+|+||||-
T Consensus 87 FkLefdiP~tYP~tPPeI~Fp~ldgkt~kmYr~GkICLdIhwkPlW~~n~P~ 138 (168)
T 3kpa_A 87 FEMNFDIPVTYPQAPPEIALPELEGKTVKMYRGGKICMTTHFFPLWARNVPY 138 (168)
T ss_dssp EEEEEECCTTTTTSCCCCBCGGGTTTCSSEETTTEECCCTTHHHHHHHTTTT
T ss_pred EEEEEeCCccCCCCCCEeecccccCcCccccCCCcEEeccccchhhHhcCCc
Confidence 9999999999999999999999999999999999999999999999999994
No 2
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=100.00 E-value=2.8e-59 Score=372.54 Aligned_cols=131 Identities=65% Similarity=1.226 Sum_probs=129.1
Q ss_pred CCCchhhhhhcccceeeccCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeeeeeccccee
Q 032122 3 GWDPNTKSTLTQIPLLSTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWYVHNLLKYE 82 (147)
Q Consensus 3 ~~d~~t~~~~~~ipl~~~~agprd~~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~~~~~~~ye 82 (147)
|||++|+++|++||||+|+|||||+++|++||+|||++|++|++.||+++++||.+.+ |++||+|+|+||++|+|.+|+
T Consensus 6 ~~~~~~~~~~~~ip~m~t~a~p~~~~~w~~RL~eE~k~L~k~v~p~k~n~~~W~~ii~-Gp~gT~WeGgcw~~~~~~~y~ 84 (172)
T 2z6o_A 6 MADEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLES-NKEGTRWFGKCWYIHDLLKYE 84 (172)
T ss_dssp CHHHHHHHHHTTSCCCCCCCCTTCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEE-CTTSCEEEEEEEEEETTEEEE
T ss_pred hhhHHHHHHHHhCcccccccCCCccHHHHHHHHHHHHHHHHHhccCccccceeEEeec-CCCCCcccCcccccccccceE
Confidence 7999999999999999999999999999999999999999999999999999999998 999999999999999999999
Q ss_pred EEEEEecCCCCCCCCCeeecCCCCCcccccccCceeeecCCcccccccCCce
Q 032122 83 FDLQFDIPVTYPATAPELELPQLDGKTQKMYRGGKICLTVHFKPLWAKNWYF 134 (147)
Q Consensus 83 F~lefdIP~tYP~tpPeI~fPeldgkt~kmYrgGkICL~dHf~PlW~~n~p~ 134 (147)
|+|+|+||++||.+||+|+||+++|++.+|||+|+||||+||+|+|++|+|-
T Consensus 85 F~L~~~fPe~YP~~PPeV~F~~~~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~ 136 (172)
T 2z6o_A 85 FDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPK 136 (172)
T ss_dssp EEEEEECCTTTTTSCCCCBCGGGTTTCSSBCTTSBBCCCTTHHHHHHHHTTS
T ss_pred EEEEEECCCCCCCCCCeeeeCCCCCCCCCCCCCCcEechhhccccccccCCc
Confidence 9999999999999999999999999999999999999999999999999994
No 3
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=99.74 E-value=2.2e-17 Score=123.07 Aligned_cols=93 Identities=18% Similarity=0.279 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 032122 29 AWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (147)
Q Consensus 29 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeld 106 (147)
....||.+||+.|.+ +....+.+.+.+++...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.-.
T Consensus 20 ~~~~RL~kEl~~l~~-------~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i 92 (136)
T 2h2y_A 20 NANYRIQKELNNFLK-------NPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKP 92 (136)
T ss_dssp SHHHHHHHHHHHHHH-------SCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSC
T ss_pred HHHHHHHHHHHHHHh-------CCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCC
Confidence 468999999999876 234567777766899999999998 89999999999999999999999999998764
Q ss_pred -CcccccccCceeeec---CCcccccc
Q 032122 107 -GKTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 107 -gkt~kmYrgGkICL~---dHf~PlW~ 129 (147)
.|+|+ |.+|+|||+ +.|+|.|+
T Consensus 93 ~~HPnv-~~~G~ICl~iL~~~WsP~~t 118 (136)
T 2h2y_A 93 PKHTHV-YSNGDICLSVLGDDYNPSLS 118 (136)
T ss_dssp CCCTTB-CTTCCBCCGGGTTTCCTTCC
T ss_pred CCCCcC-CCCCEEECccccCCCCCCCc
Confidence 79998 679999998 78999884
No 4
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=99.73 E-value=1.6e-17 Score=121.85 Aligned_cols=91 Identities=20% Similarity=0.298 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC-C
Q 032122 31 TQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD-G 107 (147)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeld-g 107 (147)
..||.+||+.|.+ +....+.+.+.+++...|.+.+-| +++|++-.|.+++.+|.+||..||.|+|-.-. .
T Consensus 8 ~~RL~kEl~~l~~-------~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~ 80 (125)
T 2fo3_A 8 NYRIQKELHNFLN-------NPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPK 80 (125)
T ss_dssp -CHHHHHHHHHHH-------SCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCC
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCC
Confidence 4699999999876 223567777756899999999998 89999999999999999999999999998765 7
Q ss_pred cccccccCceeeec---CCcccccc
Q 032122 108 KTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 108 kt~kmYrgGkICL~---dHf~PlW~ 129 (147)
|+|+ |.+|+|||+ ++|+|.|+
T Consensus 81 HPnv-~~~G~iCl~iL~~~W~P~~~ 104 (125)
T 2fo3_A 81 HTHV-YSNGDICLSLLGDDYNPSLS 104 (125)
T ss_dssp BTTB-CTTSBBCCGGGTTTCCTTCC
T ss_pred CCcC-CCCCEEEchhcCCCCCCCCc
Confidence 9998 589999998 78999884
No 5
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=99.72 E-value=1.1e-17 Score=125.66 Aligned_cols=91 Identities=21% Similarity=0.338 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEE--eeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 032122 31 TQRLKEEYKALIAYTQMNKSNDNDWFRI--SAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (147)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~L--ep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeld 106 (147)
..||.+||+.|.+ +....|.+ .+.+++...|.+.+-| +++|++-.|.++|.+|.+||..||+|+|-.-.
T Consensus 24 ~~RL~kEl~~l~~-------~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i 96 (136)
T 2a7l_A 24 QKRLQKELLALQN-------DPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGEN 96 (136)
T ss_dssp CHHHHHHHHHHHH-------SCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSC
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 4899999999887 22344553 3656889999999998 88999999999999999999999999998777
Q ss_pred C--cccccccCceeeec---CCcccccc
Q 032122 107 G--KTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 107 g--kt~kmYrgGkICL~---dHf~PlW~ 129 (147)
. |+|+ |.+|+|||+ +.|+|.|+
T Consensus 97 ~~~HPNV-~~~G~ICL~iL~~~WsP~~t 123 (136)
T 2a7l_A 97 IPVHPHV-YSNGHICLSILTEDWSPALS 123 (136)
T ss_dssp CCCBTTB-CTTCBBCCGGGTTTCCTTSC
T ss_pred cCCCccC-CCCCeEEchhcCCCCCCCCc
Confidence 7 9998 579999998 78999985
No 6
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=99.72 E-value=3.2e-17 Score=123.93 Aligned_cols=92 Identities=17% Similarity=0.235 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q 032122 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDG 107 (147)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeldg 107 (147)
...||.+||+.|.+ +....|++.|.+++...|.+.+-| +++|++..|.++|.+|.+||..||.|+|-.--.
T Consensus 6 ~~~RL~kEl~~l~~-------~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 78 (154)
T 2c2v_B 6 LPRRIIKETQRLLA-------EPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIY 78 (154)
T ss_dssp CCHHHHHHHHHHHH-------SCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcc
Confidence 46899999999887 234668888877899999999998 899999999999999999999999999988777
Q ss_pred cccccccCceeeec---CCcccccc
Q 032122 108 KTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 108 kt~kmYrgGkICL~---dHf~PlW~ 129 (147)
|+|+ |.+|+|||+ +.|+|.|+
T Consensus 79 HPnv-~~~G~iCl~iL~~~W~p~~~ 102 (154)
T 2c2v_B 79 HPNV-DKLGRICLDILKDKWSPALQ 102 (154)
T ss_dssp CTTB-CTTCBBCCHHHHTSCCTTCC
T ss_pred cCcC-ccCCeEEchhccCCCCCCCc
Confidence 9999 688999997 88999875
No 7
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=99.71 E-value=4.9e-17 Score=123.32 Aligned_cols=94 Identities=13% Similarity=0.080 Sum_probs=82.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCC
Q 032122 28 AAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQL 105 (147)
Q Consensus 28 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPel 105 (147)
.....||.+||+.|.+ +..+.|.+.|.+++...|.+.+-| +++|++..|.++|.+|.+||..||.|+|-.-
T Consensus 12 ~~~~~RL~kEl~~l~~-------~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 84 (158)
T 1zdn_A 12 PHIIRLVYKEVTTLTA-------DPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTK 84 (158)
T ss_dssp HHHHHHHHHHHHHHHH-------SCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred HHHHHHHHHHHHHHHh-------CCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccC
Confidence 5689999999999876 234668788867899999999998 8999999999999999999999999999887
Q ss_pred CCcccccccCceeeec---CCcccccc
Q 032122 106 DGKTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 106 dgkt~kmYrgGkICL~---dHf~PlW~ 129 (147)
..|+|+ |.+|+|||+ +.|+|.|+
T Consensus 85 i~HPnv-~~~G~iCl~iL~~~W~p~~~ 110 (158)
T 1zdn_A 85 IFHPNV-GANGEICVNVLKRDWTAELG 110 (158)
T ss_dssp CCCTTB-CTTSBBCHHHHTTTCCTTCC
T ss_pred cccCCC-CCCCEEehhhcCCCCCCCCc
Confidence 779998 467999997 78999874
No 8
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.71 E-value=4e-17 Score=125.58 Aligned_cols=93 Identities=16% Similarity=0.237 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 032122 29 AWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (147)
Q Consensus 29 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeld 106 (147)
....||.+||+.|.+ +....|.+.|.+++...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.-.
T Consensus 21 ~~~~RL~kEl~~l~~-------~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i 93 (166)
T 2ayv_A 21 GALKRINKELNDLSK-------DPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKI 93 (166)
T ss_dssp THHHHHHHHHHHHHH-------SCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCC
T ss_pred HHHHHHHHHHHHHHh-------CCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCC
Confidence 467999999999977 235678888877899999999998 89999999999999999999999999998887
Q ss_pred CcccccccCceeeec---CCcccccc
Q 032122 107 GKTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 107 gkt~kmYrgGkICL~---dHf~PlW~ 129 (147)
.|+|+ |.+|+|||+ +.|+|.|+
T Consensus 94 ~HPNI-~~~G~ICL~iL~~~WsP~~t 118 (166)
T 2ayv_A 94 YHPNI-NSQGAICLDILKDQWSPALT 118 (166)
T ss_dssp CBTTB-CTTCBBCCGGGTTTCCTTCC
T ss_pred cCCcC-CCCCeEEcccccccCCCCCc
Confidence 89998 579999998 78999874
No 9
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=99.71 E-value=5.1e-17 Score=122.21 Aligned_cols=91 Identities=19% Similarity=0.262 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCCc
Q 032122 31 TQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDGK 108 (147)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeldgk 108 (147)
.+||.+||+.|.+ +..+.+.+.|.+++...|.+.+-| +++|++..|.++|.+|.+||..||.|+|-.-..|
T Consensus 6 ~~RL~kEl~~l~~-------~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 78 (151)
T 4gpr_A 6 MRRIQKELREIQQ-------DPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYH 78 (151)
T ss_dssp HHHHHHHHHHHHH-------SCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCccc
Confidence 6899999999876 335678888877899999999998 8999999999999999999999999999888789
Q ss_pred ccccccCceeeec---CCcccccc
Q 032122 109 TQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 109 t~kmYrgGkICL~---dHf~PlW~ 129 (147)
+|+. .+|+|||+ +.|+|.|+
T Consensus 79 Pnv~-~~G~iCl~iL~~~W~p~~~ 101 (151)
T 4gpr_A 79 PNIN-KNGVICLDILKDQWSPALT 101 (151)
T ss_dssp TTBC-TTCBBCCGGGTTTCCTTCC
T ss_pred ceEC-CCCEEEcccccCCCCCCCc
Confidence 9995 79999998 78999875
No 10
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=99.71 E-value=2.6e-17 Score=123.48 Aligned_cols=91 Identities=16% Similarity=0.263 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCCc
Q 032122 31 TQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDGK 108 (147)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeldgk 108 (147)
.+||.+||+.|.+ +....|.+.|.+++...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.--.|
T Consensus 6 ~~RL~kEl~~l~~-------~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (150)
T 1z2u_A 6 LKRIQKELQDLGR-------DPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 78 (150)
T ss_dssp HHHHHHHHHHHHH-------SCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCccc
Confidence 5799999999987 234678888867889999999998 8999999999999999999999999999877679
Q ss_pred ccccccCceeeec---CCcccccc
Q 032122 109 TQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 109 t~kmYrgGkICL~---dHf~PlW~ 129 (147)
+|+ |.+|+|||+ +.|+|.|+
T Consensus 79 Pnv-~~~G~iCl~iL~~~W~p~~~ 101 (150)
T 1z2u_A 79 PNI-NSNGSICLDILRSQWSPALT 101 (150)
T ss_dssp TTB-CTTCBBCCGGGTTTCCTTCC
T ss_pred CcC-CCCCeEeeccccCCCCCCCC
Confidence 998 479999998 78999874
No 11
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=99.71 E-value=2.8e-17 Score=123.37 Aligned_cols=90 Identities=14% Similarity=0.165 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCCcc
Q 032122 32 QRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKT 109 (147)
Q Consensus 32 ~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeldgkt 109 (147)
+||.+||+.|.+ +....|++.|.+++...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.-..|+
T Consensus 4 ~RL~kEl~~l~~-------~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 76 (149)
T 2r0j_A 4 RRITKETQNLAN-------EPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHP 76 (149)
T ss_dssp HHHHHHHHHHHH-------SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBT
T ss_pred HHHHHHHHHHHh-------CCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccC
Confidence 799999999876 234668777767889999999988 89999999999999999999999999998877899
Q ss_pred cccccCceeeec---CCcccccc
Q 032122 110 QKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 110 ~kmYrgGkICL~---dHf~PlW~ 129 (147)
|+. .+|+|||+ +.|+|.|+
T Consensus 77 nv~-~~G~iCl~iL~~~W~p~~~ 98 (149)
T 2r0j_A 77 NID-KLGRICLDILKDKWSPALQ 98 (149)
T ss_dssp TBC-TTCBBCCGGGTTTCCTTSC
T ss_pred CCC-CCCEEechhcCCCCCCCCc
Confidence 975 67999997 78999874
No 12
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=99.70 E-value=5.5e-17 Score=124.51 Aligned_cols=94 Identities=16% Similarity=0.251 Sum_probs=82.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCC
Q 032122 28 AAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQL 105 (147)
Q Consensus 28 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPel 105 (147)
....+||.+||+.|.+ +....|++.|.+++...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.-
T Consensus 18 ~~~~~RL~kEl~~l~~-------~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~ 90 (165)
T 2c4o_A 18 SMALKRIHKELNDLAR-------DPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTR 90 (165)
T ss_dssp HHHHHHHHHHHHHHHS-------SCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC
T ss_pred cHHHHHHHHHHHHHHh-------CCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecC
Confidence 3478999999999875 345678888877899999999998 8999999999999999999999999999877
Q ss_pred CCcccccccCceeeec---CCcccccc
Q 032122 106 DGKTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 106 dgkt~kmYrgGkICL~---dHf~PlW~ 129 (147)
-.|+|+ +.+|+|||+ +.|+|.|+
T Consensus 91 i~HPnV-~~~G~ICl~iL~~~W~P~~t 116 (165)
T 2c4o_A 91 IYHPNI-NSNGSICLDILRSQWSPALT 116 (165)
T ss_dssp CCBTTB-CTTCBBCCGGGTTTCCTTCC
T ss_pred CcCCcC-CCCCeEeehhhcCCCCCcCc
Confidence 679998 479999998 78999874
No 13
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=99.70 E-value=7.7e-17 Score=122.16 Aligned_cols=92 Identities=20% Similarity=0.312 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCC-CCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 032122 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAANP-EGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (147)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~-dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeld 106 (147)
-.+||.+||+.|.+ +..+.|++.|++. +...|.+.+-| +++|++..|.++|.+|.+||..||.|+|-.-.
T Consensus 4 a~~RL~kEl~~l~~-------~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 76 (164)
T 3h8k_A 4 ALKRLMAEYKQLTL-------NPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEM 76 (164)
T ss_dssp HHHHHHHHHHHHHH-------SCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCC
Confidence 46899999999886 3456788888775 99999999998 89999999999999999999999999998877
Q ss_pred CcccccccCceeeec----------------CCcccccc
Q 032122 107 GKTQKMYRGGKICLT----------------VHFKPLWA 129 (147)
Q Consensus 107 gkt~kmYrgGkICL~----------------dHf~PlW~ 129 (147)
.|+|+ |.+|+|||+ +.|+|.|+
T Consensus 77 ~HPNV-~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~t 114 (164)
T 3h8k_A 77 FHPNI-YPDGRVCISILHAPGDDPMGYESSAERWSPVQS 114 (164)
T ss_dssp CCTTB-CTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCC
T ss_pred ccCCC-CCCCcEeeecccCcccccccccccccCCCCCCc
Confidence 79998 789999996 56888874
No 14
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=99.70 E-value=3.5e-17 Score=123.54 Aligned_cols=92 Identities=17% Similarity=0.232 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q 032122 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDG 107 (147)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeldg 107 (147)
...||.+||+.|.+ +....|.+.|.+++...|.+.+-| +++|++..|.++|.+|.+||..||.|+|-.--.
T Consensus 6 ~~~RL~kE~~~l~~-------~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 78 (155)
T 1jat_A 6 LPKRIIKETEKLVS-------DPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIY 78 (155)
T ss_dssp CCHHHHHHHHHHHH-------SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccc
Confidence 45899999999987 345678888867889999999998 899999999999999999999999999987777
Q ss_pred cccccccCceeeec---CCcccccc
Q 032122 108 KTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 108 kt~kmYrgGkICL~---dHf~PlW~ 129 (147)
|+|+. .+|+|||+ +.|+|.|+
T Consensus 79 HPnv~-~~G~iCl~iL~~~W~p~~~ 102 (155)
T 1jat_A 79 HPNID-RLGRICLDVLKTNWSPALQ 102 (155)
T ss_dssp BTTBC-TTCCBCCGGGTTTCCTTCC
T ss_pred cCCCC-CCCEEEchhhccCCCCCCC
Confidence 99986 99999998 78999874
No 15
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=99.70 E-value=7e-17 Score=122.04 Aligned_cols=93 Identities=15% Similarity=0.290 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 032122 29 AWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (147)
Q Consensus 29 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeld 106 (147)
....||.+||+.|.+- ....|.+.|.+++...|.+.+-| +++|++..|.++|.+|.+||..||.|+|-.-.
T Consensus 9 ~~~~RL~kEl~~l~~~-------~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 81 (156)
T 2e2c_A 9 SVSKRLQQELRTLLMS-------GDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPC 81 (156)
T ss_dssp CHHHHHHHHHHHHHHH-------CCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred HHHHHHHHHHHHHHhC-------CCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCc
Confidence 3679999999999862 23568788867899999999998 89999999999999999999999999998887
Q ss_pred CcccccccCceeeec---CCcccccc
Q 032122 107 GKTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 107 gkt~kmYrgGkICL~---dHf~PlW~ 129 (147)
.|+|+. .+|+|||+ ++|+|.|+
T Consensus 82 ~HPnv~-~~G~iCl~iL~~~W~p~~~ 106 (156)
T 2e2c_A 82 WHPNVD-QSGNICLDILKENWTASYD 106 (156)
T ss_dssp CBTTBC-TTCBBCCGGGTTTCCTTCC
T ss_pred ccCCCc-cCceEECccccccCCCCCc
Confidence 899975 59999998 67999874
No 16
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=99.70 E-value=6.3e-17 Score=121.24 Aligned_cols=92 Identities=15% Similarity=0.255 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCC-CCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q 032122 31 TQRLKEEYKALIAYTQMNKSNDNDWFRISAANP-EGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDG 107 (147)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~-dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeldg 107 (147)
..||.+||+.|.+- ....+++.|.++ +...|.+.+-| +++|++..|.++|.+|.+||..||.|.|-.-..
T Consensus 3 ~~RL~~El~~l~~~-------~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 75 (149)
T 1fxt_A 3 AKRIMKEIQAVKDD-------PAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVY 75 (149)
T ss_dssp HHHHHHHHHHHHHC-------GGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHhC-------CCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCc
Confidence 37999999998872 235677878666 89999999998 899999999999999999999999999987777
Q ss_pred cccccccCceeeec---CCcccccc
Q 032122 108 KTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 108 kt~kmYrgGkICL~---dHf~PlW~ 129 (147)
|+|+-..+|+|||+ +.|+|.|+
T Consensus 76 HPni~~~~G~iCl~iL~~~W~p~~~ 100 (149)
T 1fxt_A 76 HPNISSVTGAICLDILKNAWSPVIT 100 (149)
T ss_dssp BTTBCSSSCCBCCHHHHTSCCTTCC
T ss_pred cCCCcCCCCeEeCCcCCCCCCCCCc
Confidence 99997779999998 78999874
No 17
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=99.69 E-value=1.6e-16 Score=120.81 Aligned_cols=92 Identities=17% Similarity=0.299 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCC-CCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 032122 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAAN-PEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (147)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n-~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeld 106 (147)
=..||.+||+.|.+ +....|++.|++ .+...|.+.+-| +++|++..|.++|.+|.+||..||.|+|-.-.
T Consensus 5 a~~RL~kEl~~l~~-------~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i 77 (165)
T 2ucz_A 5 AQKRLLKELQQLIK-------DSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSI 77 (165)
T ss_dssp HHHHHHHHHHHHHH-------SCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCC
Confidence 36899999999876 345678888876 689999999988 89999999999999999999999999998877
Q ss_pred CcccccccCceeeec----------------CCcccccc
Q 032122 107 GKTQKMYRGGKICLT----------------VHFKPLWA 129 (147)
Q Consensus 107 gkt~kmYrgGkICL~----------------dHf~PlW~ 129 (147)
.|+|+ |.+|+|||+ +.|+|.|+
T Consensus 78 ~HPNv-~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~ 115 (165)
T 2ucz_A 78 LHPNI-YPNGEVCISILHSPGDDPNMYELAEERWSPVQS 115 (165)
T ss_dssp SCTTB-CTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCC
T ss_pred ccCCC-CCCCcEeehhhCCccccccccCCCCCCCCCcCc
Confidence 89997 679999997 46888874
No 18
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=99.69 E-value=4.9e-17 Score=127.43 Aligned_cols=95 Identities=19% Similarity=0.291 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCCc
Q 032122 31 TQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDGK 108 (147)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeldgk 108 (147)
.+||.+||+.|.+- .......|.++|.+++.+.|.+.+-| +++|++..|.++|.+|.+||..||.|+|..-..|
T Consensus 7 ~~Rl~kEl~~l~~~----~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 82 (201)
T 3k9o_A 7 VQRIKREFKEVLKS----EETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWH 82 (201)
T ss_dssp HHHHHHHHHHHHTC----HHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred HHHHHHHHHHHHhC----CCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCccc
Confidence 58999999998761 11114678899978999999999998 8999999999999999999999999999887789
Q ss_pred ccccccCceeeec---CCcccccc
Q 032122 109 TQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 109 t~kmYrgGkICL~---dHf~PlW~ 129 (147)
+|+...+|+|||+ +.|+|.|+
T Consensus 83 Pnv~~~~G~iCl~iL~~~W~p~~~ 106 (201)
T 3k9o_A 83 PNISSVTGAICLDILKDQWAAAMT 106 (201)
T ss_dssp TTBCTTTCBBCCGGGTTTCCTTCC
T ss_pred CCCcCCCCeeeCcccccCCCCCCC
Confidence 9998889999998 78999875
No 19
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.68 E-value=1.8e-16 Score=121.64 Aligned_cols=92 Identities=20% Similarity=0.220 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q 032122 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDG 107 (147)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeldg 107 (147)
-..||.+||+.|.+ +....|.+.+.+++...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.-..
T Consensus 5 ~~~RL~kEl~~l~~-------~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 77 (169)
T 1yh2_A 5 RASRLKRELHMLAT-------EPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIY 77 (169)
T ss_dssp HHHHHHHHHHHHHH-------SCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCc
Confidence 46899999999876 234567777867899999999998 899999999999999999999999999988878
Q ss_pred cccccccCceeeec-------CCcccccc
Q 032122 108 KTQKMYRGGKICLT-------VHFKPLWA 129 (147)
Q Consensus 108 kt~kmYrgGkICL~-------dHf~PlW~ 129 (147)
|+|+. .+|+|||+ +.|+|.|+
T Consensus 78 HPNv~-~~G~iCl~iL~~~~~~~W~p~~~ 105 (169)
T 1yh2_A 78 HPNID-SAGRICLDVLKLPPKGAWRPSLN 105 (169)
T ss_dssp BTTBC-TTCBBCCGGGSCTTTSCCCTTSC
T ss_pred cccCC-cCCeEecccccCCcccCCCCCCc
Confidence 99986 89999997 57999874
No 20
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=99.68 E-value=9.6e-17 Score=123.99 Aligned_cols=94 Identities=10% Similarity=0.115 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 032122 29 AWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (147)
Q Consensus 29 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeld 106 (147)
....||.+||+.|.+- ....|.+.|++++...|.+.+-| +++|++..|.++|.+|.+||..||.|+|-.-.
T Consensus 23 ~a~~RL~kEl~~l~~~-------~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i 95 (169)
T 1yrv_A 23 RAYLLLHRDFCDLKEN-------NYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIP 95 (169)
T ss_dssp HHHHHHHHHHHHHHHH-------CCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCC
T ss_pred HHHHHHHHHHHHHHhC-------CCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCC
Confidence 4689999999998761 23557788877899999999998 89999999999999999999999999998777
Q ss_pred CcccccccCceeeec-----CCcccccc
Q 032122 107 GKTQKMYRGGKICLT-----VHFKPLWA 129 (147)
Q Consensus 107 gkt~kmYrgGkICL~-----dHf~PlW~ 129 (147)
.|+|+.|.+|+|||+ +.|+|.|+
T Consensus 96 ~HPNI~~~~G~ICL~iL~~~~~WsP~~t 123 (169)
T 1yrv_A 96 FHPNVDPHTGQPCIDFLDNPEKWNTNYT 123 (169)
T ss_dssp CCTTBCTTTCCBCCHHHHCGGGCCTTCC
T ss_pred ccCcccCCCCeEeehhhcCCcCCCCcCC
Confidence 799999999999997 68999874
No 21
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=99.68 E-value=1.2e-16 Score=120.05 Aligned_cols=92 Identities=16% Similarity=0.275 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q 032122 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDG 107 (147)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeldg 107 (147)
-..||.+||+.|.+ +..+.|.+.|.+++...|.+.+-| +++|++..|.++|.+|.+||..||.|.|-.--.
T Consensus 5 a~~RL~~E~~~l~~-------~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 77 (152)
T 2aak_A 5 ARKRLMRDFKRLQQ-------DPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMF 77 (152)
T ss_dssp HHHHHHHHHHHHHH-------SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcc
Confidence 35899999999987 234578788867889999999998 899999999999999999999999999987767
Q ss_pred cccccccCceeeec---CCcccccc
Q 032122 108 KTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 108 kt~kmYrgGkICL~---dHf~PlW~ 129 (147)
|+|+. .+|+|||+ +.|+|.|+
T Consensus 78 HPnv~-~~G~iCl~iL~~~W~p~~~ 101 (152)
T 2aak_A 78 HPNIY-ADGSICLDILQNQWSPIYD 101 (152)
T ss_dssp CTTBC-TTSBBCCGGGTTSCCTTCC
T ss_pred cCCCC-CCCEEechhhcCCCCCCCc
Confidence 99985 59999998 68999874
No 22
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=99.67 E-value=1.1e-16 Score=122.76 Aligned_cols=94 Identities=19% Similarity=0.261 Sum_probs=80.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCC-----CCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCee
Q 032122 28 AAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANP-----EGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPEL 100 (147)
Q Consensus 28 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~-----dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI 100 (147)
-+=.+||.+||+.|.+ +....|...|++. +...|.+.+-| +++|++-.|.|+|.+|..||..||.|
T Consensus 9 ~~~~~RL~kEl~~l~~-------~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v 81 (163)
T 3rcz_B 9 SLCKTRLQEERKQWRR-------DHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKC 81 (163)
T ss_dssp CHHHHHHHHHHHHHHH-------SCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHHHh-------CCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEE
Confidence 3457899999999987 3455676667544 78999999998 89999999999999999999999999
Q ss_pred ecCCCCCcccccccCceeeec-----CCcccccc
Q 032122 101 ELPQLDGKTQKMYRGGKICLT-----VHFKPLWA 129 (147)
Q Consensus 101 ~fPeldgkt~kmYrgGkICL~-----dHf~PlW~ 129 (147)
+|-.--.|+|+ |.+|+|||+ +.|+|.|+
T Consensus 82 ~F~t~i~HPnV-~~~G~iCl~iL~~~~~W~p~~t 114 (163)
T 3rcz_B 82 RFTPPLFHPNV-YPSGTVCLSILNEEEGWKPAIT 114 (163)
T ss_dssp EESSCCCSTTB-CTTSBBCCGGGCTTTTCCTTCC
T ss_pred EEeCCCccCCC-CCCCcEeccccCCCCCcCCcCc
Confidence 99887779999 599999998 24999874
No 23
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=99.66 E-value=3.4e-16 Score=118.55 Aligned_cols=96 Identities=19% Similarity=0.276 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q 032122 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDG 107 (147)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeldg 107 (147)
-..||.+||+.|.+--+ .....|.+.+.+++...|.+.+-| +++|++-.|.++|.+|..||..||.|.|-.-..
T Consensus 9 a~~RL~kEl~~l~~~~~----~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 84 (159)
T 2bep_A 9 AVQRIKREFKEVLKSEE----TSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 84 (159)
T ss_dssp HHHHHHHHHHHHHHCHH----HHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHHhcCC----CCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCC
Confidence 46899999999976211 123567888877899999999998 899999999999999999999999999987767
Q ss_pred cccccccCceeeec---CCcccccc
Q 032122 108 KTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 108 kt~kmYrgGkICL~---dHf~PlW~ 129 (147)
|+|+-..+|+|||+ +.|+|.|+
T Consensus 85 HPni~~~~G~iCl~iL~~~W~p~~~ 109 (159)
T 2bep_A 85 HPNISSVTGAICLDILKDQWAAAMT 109 (159)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCC
T ss_pred ccCCCCCCCEEeChhhhccCCCCCc
Confidence 99998889999998 67999874
No 24
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.66 E-value=1.8e-16 Score=125.23 Aligned_cols=108 Identities=19% Similarity=0.261 Sum_probs=82.5
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhcC---CC---CCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCC
Q 032122 22 AGPRDGAAWTQRLKEEYKALIAYTQMNK---SN---DNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTY 93 (147)
Q Consensus 22 agprd~~~w~~RLkeEY~aLikyv~~nk---~~---d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tY 93 (147)
++++.......||.+||+.|.+-....+ .+ ....|.+.+.+++...|.+.+-| +++|++-.|.|+|.+|.+|
T Consensus 25 ~~~~~~~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~Y 104 (193)
T 2f4z_A 25 AQPRGTPREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDY 104 (193)
T ss_dssp -------CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTT
T ss_pred cCCCCCCHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcC
Confidence 4555555678999999999987221000 00 02567788877889999999998 8999999999999999999
Q ss_pred CCCCCeeecCCCCCcccccccCceeeec---CCcccccc
Q 032122 94 PATAPELELPQLDGKTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 94 P~tpPeI~fPeldgkt~kmYrgGkICL~---dHf~PlW~ 129 (147)
|..||.|.|-.-..|+|+-..+|+|||+ +.|+|.|+
T Consensus 105 P~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~t 143 (193)
T 2f4z_A 105 PYNPPKMKFVTKIWHPNISSQTGAICLDILKHEWSPALT 143 (193)
T ss_dssp TTSCCEEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTSC
T ss_pred CCCCCeEEEecCCccCCCcCCCCEEECccccccCCCCCC
Confidence 9999999998777799998889999998 67999874
No 25
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=99.66 E-value=2e-16 Score=129.89 Aligned_cols=114 Identities=18% Similarity=0.179 Sum_probs=85.9
Q ss_pred hcccceeeccCCCCC------hhHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeE
Q 032122 12 LTQIPLLSTKAGPRD------GAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEF 83 (147)
Q Consensus 12 ~~~ipl~~~~agprd------~~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF 83 (147)
-+..+..++++.|.- ...-.+||.+||+.|.+- +......|.+.|++++...|.+.+-| +++|++-.|
T Consensus 34 ~~~~~~~~~~~~~~~~s~~~Ms~~a~~RL~kEl~~l~~~----~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f 109 (253)
T 3e46_A 34 PDLGTDDDDKAMADIGSEFDMANIAVQRIKREFKEVLKS----EETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRY 109 (253)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHC----HHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEE
T ss_pred ccccccccccccccccccccccHHHHHHHHHHHHHHHhC----CCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEE
Confidence 344555566665542 246899999999998761 11124678888988999999999998 899999999
Q ss_pred EEEEecCCCCCCCCCeeecCCCCCcccccccCceeeec---CCcccccc
Q 032122 84 DLQFDIPVTYPATAPELELPQLDGKTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 84 ~lefdIP~tYP~tpPeI~fPeldgkt~kmYrgGkICL~---dHf~PlW~ 129 (147)
.|+|.+|.+||..||.|+|..-..|+|+...+|+|||+ +.|+|.|+
T Consensus 110 ~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~~G~ICL~iL~~~WsP~~t 158 (253)
T 3e46_A 110 QLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMT 158 (253)
T ss_dssp EEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGGTTCCCTTCC
T ss_pred EEEEECCCCCCCCCCeeeecCCCccCCccCCCCeeecccccCCCCCCCC
Confidence 99999999999999999998877799998889999998 78999875
No 26
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=99.66 E-value=2.8e-16 Score=120.13 Aligned_cols=98 Identities=16% Similarity=0.142 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHH----HhcCCC-CCCceEEeeCCCCCCeeeeeeee--eeccc--ceeEEEEEecCCCCCCCCCeee
Q 032122 31 TQRLKEEYKALIAYT----QMNKSN-DNDWFRISAANPEGTRWTGKCWY--VHNLL--KYEFDLQFDIPVTYPATAPELE 101 (147)
Q Consensus 31 ~~RLkeEY~aLikyv----~~nk~~-d~dwf~Lep~n~dgTrW~gkcw~--~~~~~--~yeF~lefdIP~tYP~tpPeI~ 101 (147)
.+||.+||+.|.+-. +.|... ....+.+.+.+++...|.+.+-| +++|+ +..|.++|.+|.+||..||.|+
T Consensus 10 ~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v~ 89 (167)
T 4ds2_A 10 NKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTVR 89 (167)
T ss_dssp CHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEEE
T ss_pred HHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEEE
Confidence 479999999999866 222222 25677777756899999999998 88999 9999999999999999999999
Q ss_pred cCCCCCcccccccCceeeec---CCcccccc
Q 032122 102 LPQLDGKTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 102 fPeldgkt~kmYrgGkICL~---dHf~PlW~ 129 (147)
|..-..|+|+. .+|+|||+ +.|+|.|+
T Consensus 90 f~t~i~HPnv~-~~G~iCl~il~~~W~p~~~ 119 (167)
T 4ds2_A 90 FVTPVYSPLVT-GEGGICDRMVNDFWTPDQH 119 (167)
T ss_dssp ESSCCCCSSCC-TTSCCCTHHHHTTCCTTSC
T ss_pred EeCCcccccCC-CCCEEEcccCcCCCCCCCC
Confidence 98887899995 89999997 89999986
No 27
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=99.66 E-value=3.7e-16 Score=125.47 Aligned_cols=95 Identities=19% Similarity=0.245 Sum_probs=84.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCC
Q 032122 28 AAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQL 105 (147)
Q Consensus 28 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPel 105 (147)
..-..||.+||+.|.+ +....|.+.|.+++...|.+.+-| ++||++-.|.|+|.+|.+||..||.|+|-.-
T Consensus 22 s~a~~RL~kEl~~l~~-------~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~ 94 (216)
T 2pwq_A 22 SKELLRLQKELKDIEN-------ENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTK 94 (216)
T ss_dssp CHHHHHHHHHHHHHHH-------SCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred CHHHHHHHHHHHHHHh-------CCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCC
Confidence 4568999999999876 233668888878899999999998 8999999999999999999999999999877
Q ss_pred CCcccccccCceeeec---CCcccccc
Q 032122 106 DGKTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 106 dgkt~kmYrgGkICL~---dHf~PlW~ 129 (147)
..|+|+-..+|+|||+ +.|+|.|+
T Consensus 95 i~HPNI~~~~G~ICL~iL~~~WsP~~t 121 (216)
T 2pwq_A 95 IWHPNISSQTGAICLDVLKNEWSPALT 121 (216)
T ss_dssp CCBTTBCTTTCBBCCHHHHHHCCTTCC
T ss_pred CcCCCCcCCCCEEEchhhcccCCCCCc
Confidence 7799998889999998 67999874
No 28
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=99.66 E-value=6.4e-16 Score=119.04 Aligned_cols=100 Identities=17% Similarity=0.346 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHHH-HhcCC--CCCCc-eEEee-CCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeec
Q 032122 30 WTQRLKEEYKALIAYT-QMNKS--NDNDW-FRISA-ANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELEL 102 (147)
Q Consensus 30 w~~RLkeEY~aLikyv-~~nk~--~d~dw-f~Lep-~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~f 102 (147)
-..||.+||+.|.+-. ..... .+..| +...| .+.+...|.+.+-| +++|++-.|.++|.+|.+||..||.|.|
T Consensus 7 ~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f 86 (172)
T 2y9m_A 7 CMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISF 86 (172)
T ss_dssp HHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred HHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEE
Confidence 4689999999997632 11011 12234 46667 45789999999998 8999999999999999999999999999
Q ss_pred CC-CCCcccccccCceeeec----CCcccccc
Q 032122 103 PQ-LDGKTQKMYRGGKICLT----VHFKPLWA 129 (147)
Q Consensus 103 Pe-ldgkt~kmYrgGkICL~----dHf~PlW~ 129 (147)
-. --.|+|+-|.+|+|||+ +.|+|.|+
T Consensus 87 ~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~ 118 (172)
T 2y9m_A 87 MQNNILHCNVKSATGEICLNILKPEEWTPVWD 118 (172)
T ss_dssp CTTSCCCTTEETTTTEECCGGGSTTTCCTTCC
T ss_pred eeCCeecCCCcCCCCEEeccccCCCCCCCcCc
Confidence 87 66699999999999997 68999874
No 29
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=99.66 E-value=6.3e-16 Score=122.07 Aligned_cols=94 Identities=14% Similarity=0.172 Sum_probs=82.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCC
Q 032122 28 AAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQL 105 (147)
Q Consensus 28 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPel 105 (147)
.....||.+||+.|.+ +....|.+.|.+++...|.+.+-| +++|++..|.|+|.+|.+||..||.|.|-.-
T Consensus 47 s~a~~RL~kEl~~l~~-------~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~ 119 (194)
T 3bzh_A 47 STSAKRIQKELADITL-------DPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTR 119 (194)
T ss_dssp HHHHHHHHHHHHHHHH-------SCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred cHHHHHHHHHHHHHHh-------CCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCC
Confidence 3478999999999876 234667888877899999999998 8899999999999999999999999999887
Q ss_pred CCcccccccCceeeec---CCcccccc
Q 032122 106 DGKTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 106 dgkt~kmYrgGkICL~---dHf~PlW~ 129 (147)
..|+|+. .+|+|||+ +.|+|.|.
T Consensus 120 i~HPNV~-~~G~ICL~iL~~~WsP~~t 145 (194)
T 3bzh_A 120 IYHCNIN-SQGVICLDILKDNWSPALT 145 (194)
T ss_dssp CCBTTBC-TTCBBCCGGGTTTCCTTCC
T ss_pred CccceEC-CCCceechhhhccCCCcCc
Confidence 7799985 78999998 68999874
No 30
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=99.65 E-value=5.9e-16 Score=119.45 Aligned_cols=94 Identities=15% Similarity=0.227 Sum_probs=81.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCC-CCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCC
Q 032122 28 AAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAAN-PEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQ 104 (147)
Q Consensus 28 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n-~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPe 104 (147)
..+..||.+||+.|.+ +....|.+.|++ ++...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.
T Consensus 16 ~~~~~rL~kEl~~l~~-------~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T 88 (172)
T 2awf_A 16 PRGSLLLRRQLAELNK-------NPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFIT 88 (172)
T ss_dssp CTTHHHHHHHHHHHHH-------SCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECS
T ss_pred HHHHHHHHHHHHHHHh-------CCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccC
Confidence 4588999999999876 345678888866 689999999998 899999999999999999999999999987
Q ss_pred CCCcccccccCceeeec----------------CCcccccc
Q 032122 105 LDGKTQKMYRGGKICLT----------------VHFKPLWA 129 (147)
Q Consensus 105 ldgkt~kmYrgGkICL~----------------dHf~PlW~ 129 (147)
-..|+|+ |.+|+|||+ +.|+|.|+
T Consensus 89 ~i~HPNV-~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~t 128 (172)
T 2awf_A 89 EIWHPNV-DKNGDVCISILHEPGEDKYGYEKPEERWLPIHT 128 (172)
T ss_dssp CCCCTTB-CTTCBBCCGGGSCC---------CTTSCCTTCC
T ss_pred CCccCCC-CCCCcEehhhcCCcccccccccccCCCCCCcCc
Confidence 7779998 578999997 46999874
No 31
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=99.65 E-value=4.1e-16 Score=120.25 Aligned_cols=91 Identities=16% Similarity=0.269 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCCc
Q 032122 31 TQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDGK 108 (147)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeldgk 108 (147)
..||.+||+.|.+ +....|.+.|.+.+...|.+.+-| .++|++..|.|+|.+|.+||..||.|+|-.--.|
T Consensus 6 ~~RL~kEl~~l~~-------~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~H 78 (169)
T 1ayz_A 6 RRRLMRDFKRMKE-------DAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFH 78 (169)
T ss_dssp HHHHHHHHHHHHH-------SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCcc
Confidence 5899999999876 234567777867889999999998 8999999999999999999999999999887779
Q ss_pred ccccccCceeeec---CCcccccc
Q 032122 109 TQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 109 t~kmYrgGkICL~---dHf~PlW~ 129 (147)
+|+. .+|+|||+ +.|+|.|+
T Consensus 79 PNI~-~~G~ICl~iL~~~WsP~~~ 101 (169)
T 1ayz_A 79 PNVY-ANGEICLDILQNRWTPTYD 101 (169)
T ss_dssp TTBC-TTSBBCCGGGTTTCCTTCC
T ss_pred CCCC-CCCeEeehhhccCCCCcCc
Confidence 9985 69999998 67999884
No 32
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=99.64 E-value=1.2e-15 Score=118.46 Aligned_cols=92 Identities=17% Similarity=0.312 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEe-eCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 032122 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRIS-AANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (147)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Le-p~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeld 106 (147)
-.+||.+||+.|.+ +..+.|++. +.+.+...|.+.+-| +++|++-.|.++|.+|..||..||.|+|-.-.
T Consensus 8 a~kRL~kEl~~l~~-------~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 80 (183)
T 3rz3_A 8 SQKALLLELKGLQE-------EPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKM 80 (183)
T ss_dssp HHHHHHHHHHHHHH-------SCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCC
Confidence 47899999999876 334567777 434789999999998 89999999999999999999999999998777
Q ss_pred CcccccccCceeeec----------------CCcccccc
Q 032122 107 GKTQKMYRGGKICLT----------------VHFKPLWA 129 (147)
Q Consensus 107 gkt~kmYrgGkICL~----------------dHf~PlW~ 129 (147)
.|+|+ |.+|+|||+ +.|+|.|+
T Consensus 81 ~HPnV-~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~ 118 (183)
T 3rz3_A 81 WHPNI-YETGDVCISILHPPVDDPQSGELPSERWNPTQN 118 (183)
T ss_dssp CCTTB-CTTSBBCCTTC--------------CCCCTTCC
T ss_pred ccCCC-CCCCcEehhhcCcccccccccccccCCCCCcCc
Confidence 79998 789999997 56999875
No 33
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=99.63 E-value=7.3e-16 Score=120.41 Aligned_cols=96 Identities=17% Similarity=0.265 Sum_probs=81.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecC
Q 032122 26 DGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELP 103 (147)
Q Consensus 26 d~~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fP 103 (147)
.......||.+||+.|.+- ....|.+.|.+++...|.+.+-| +++|++..|.|+|.+|.+||..||.|+|-
T Consensus 27 ~~~~~~~RL~kEl~~l~~~-------~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~ 99 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMMS-------GDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFL 99 (179)
T ss_dssp ---CHHHHHHHHHHHHHHH-------CCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEES
T ss_pred cChHHHHHHHHHHHHHHhC-------CCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEe
Confidence 3456889999999999872 23557777756789999999998 89999999999999999999999999998
Q ss_pred CCCCcccccccCceeeec---CCcccccc
Q 032122 104 QLDGKTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 104 eldgkt~kmYrgGkICL~---dHf~PlW~ 129 (147)
.-..|+|+. .+|+|||+ +.|+|.|+
T Consensus 100 T~i~HPNV~-~~G~ICL~iL~~~WsP~~t 127 (179)
T 1i7k_A 100 TPCYHPNVD-TQGNISLDILKEKWSALYD 127 (179)
T ss_dssp SCCCSTTBC-TTCBBCCGGGTTTCCTTCC
T ss_pred cCCccCccc-cCCeEEcccCcCcCCCCCC
Confidence 887899985 58999998 67999874
No 34
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=99.62 E-value=9.8e-16 Score=116.08 Aligned_cols=91 Identities=22% Similarity=0.342 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEEeeCC-----CCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecC
Q 032122 31 TQRLKEEYKALIAYTQMNKSNDNDWFRISAAN-----PEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELP 103 (147)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n-----~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fP 103 (147)
.+||.+||+.|.+ +....|.+.|.+ .+...|.+.+-| +++|++..|.++|.+|.+||..||.|.|-
T Consensus 6 ~~RL~kE~~~l~~-------~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 78 (157)
T 2gjd_A 6 LQRLQEERKKWRK-------DHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFP 78 (157)
T ss_dssp HHHHHHHHHHHHH-------CCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECC
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeecc
Confidence 5799999999886 234556666642 378899999998 89999999999999999999999999998
Q ss_pred CCCCcccccccCceeeec---C--Ccccccc
Q 032122 104 QLDGKTQKMYRGGKICLT---V--HFKPLWA 129 (147)
Q Consensus 104 eldgkt~kmYrgGkICL~---d--Hf~PlW~ 129 (147)
.--.|+|+ |.+|+|||+ . .|+|.|+
T Consensus 79 t~i~HPnv-~~~G~iCl~iL~~~~~W~p~~~ 108 (157)
T 2gjd_A 79 AGFYHPNV-YPSGTICLSILNEDQDWRPAIT 108 (157)
T ss_dssp TTCCCTTB-CTTSBBCCGGGCTTTTCCTTCC
T ss_pred CCCccCCC-CCCCcEeeecccCCCCCCCCCc
Confidence 76669998 589999998 3 6999874
No 35
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=99.61 E-value=2.1e-15 Score=116.43 Aligned_cols=93 Identities=16% Similarity=0.149 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCc-eEEeeCCC-C--CCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecC
Q 032122 30 WTQRLKEEYKALIAYTQMNKSNDNDW-FRISAANP-E--GTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELP 103 (147)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dw-f~Lep~n~-d--gTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fP 103 (147)
=..||.+||+.|.+ +..+. +.+.++++ + ...|.+.+-| +++|++..|.++|.+|.+||..||.|+|-
T Consensus 26 ~~~RL~kEl~~l~~-------~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~ 98 (160)
T 2a4d_A 26 RNFRLLEELEEGQK-------GVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFV 98 (160)
T ss_dssp HHHHHHHHHHHHHS-------CCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred HHHHHHHHHHHHHh-------CCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEe
Confidence 45899999999864 22333 67766443 3 8899999998 89999999999999999999999999998
Q ss_pred CCCCcccccccCceeeec-----CCcccccc
Q 032122 104 QLDGKTQKMYRGGKICLT-----VHFKPLWA 129 (147)
Q Consensus 104 eldgkt~kmYrgGkICL~-----dHf~PlW~ 129 (147)
.-..|+|+-..+|+|||+ +.|+|.|+
T Consensus 99 T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~t 129 (160)
T 2a4d_A 99 TKINMNGVNSSNGVVDPRAISVLAKWQNSYS 129 (160)
T ss_dssp BCCCCTTBCTTTCBBCGGGSHHHHTCCTTCC
T ss_pred cCceeCCEECCCCEEehhhcCCccCCCccCc
Confidence 777899997789999975 78999874
No 36
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=99.61 E-value=1.7e-15 Score=121.63 Aligned_cols=92 Identities=15% Similarity=0.273 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCC-CCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q 032122 31 TQRLKEEYKALIAYTQMNKSNDNDWFRISAANP-EGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDG 107 (147)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~-dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeldg 107 (147)
..||.+||+.|.+ +....|++.|+++ +.+.|.+.+-| ++||++..|.++|.+|.+||..||.|+|-.-..
T Consensus 4 ~~RL~kEl~~l~~-------~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~ 76 (215)
T 1tte_A 4 AKRIMKEIQAVKD-------DPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVY 76 (215)
T ss_dssp HHHHHHHHHHHHT-------TTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCC
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCc
Confidence 4799999999876 2345678888665 56799999998 899999999999999999999999999988777
Q ss_pred cccccccCceeeec---CCcccccc
Q 032122 108 KTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 108 kt~kmYrgGkICL~---dHf~PlW~ 129 (147)
|+|+--.+|+|||+ +.|+|.|+
T Consensus 77 HPNI~~~~G~ICL~iL~~~WsP~~t 101 (215)
T 1tte_A 77 HPNISSVTGAICLDILRNAWSPVIT 101 (215)
T ss_dssp CSSSCSSSSCCCSSTTTCCSCTTCC
T ss_pred cCcCcCCCCEEECccCCCCCCCcCc
Confidence 99997669999998 78999874
No 37
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.61 E-value=1.2e-15 Score=119.47 Aligned_cols=92 Identities=15% Similarity=0.292 Sum_probs=74.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCC
Q 032122 28 AAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQL 105 (147)
Q Consensus 28 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPel 105 (147)
.....||.+||+.|.+ +....|.+.|.+++...|.+.+-| +++|++-.|.++|.+|.+||..||.|.|-.-
T Consensus 13 ~~a~~RL~kEl~~l~~-------~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~ 85 (187)
T 2f4w_A 13 TTATQRLKQDYLRIKK-------DPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP 85 (187)
T ss_dssp -CHHHHHHHHHHHHHH-------SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC
T ss_pred cHHHHHHHHHHHHHHh-------CCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC
Confidence 4588999999999986 334678888867899999999998 9999999999999999999999999999654
Q ss_pred CCcccccccCceeeec------CCcccccc
Q 032122 106 DGKTQKMYRGGKICLT------VHFKPLWA 129 (147)
Q Consensus 106 dgkt~kmYrgGkICL~------dHf~PlW~ 129 (147)
|. ..+.+|+|||+ +.|+|.|+
T Consensus 86 --~~-~~~~~G~ICL~iL~~~~~~W~P~~t 112 (187)
T 2f4w_A 86 --NG-RFKCNTRLCLSITDFHPDTWNPAWS 112 (187)
T ss_dssp --CS-SBCTTSCBC----------CCTTCC
T ss_pred --Cc-eeccCCeEeeeccccCccCCCCcCc
Confidence 22 23468999997 46998874
No 38
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.61 E-value=2e-15 Score=112.34 Aligned_cols=93 Identities=17% Similarity=0.166 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEEeeCC-C--CCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCC
Q 032122 31 TQRLKEEYKALIAYTQMNKSNDNDWFRISAAN-P--EGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQL 105 (147)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n-~--dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPel 105 (147)
..||.+||+.|.+- .....+++.+++ + +...|.+.+-| +++|++..|.++|.+|.+||..||.|+|-.-
T Consensus 8 ~~RL~kEl~~l~~~------~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 8 NFRLLEELEKGEKG------FGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp HHHHHHHHHHHHC----------CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred HHHHHHHHHHHHhc------CCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc
Confidence 47999999998752 124567777754 2 37899999998 8999999999999999999999999999877
Q ss_pred CCcccccccCcee--eec--CCcccccc
Q 032122 106 DGKTQKMYRGGKI--CLT--VHFKPLWA 129 (147)
Q Consensus 106 dgkt~kmYrgGkI--CL~--dHf~PlW~ 129 (147)
..|+|+...||+| ||+ ..|+|.|+
T Consensus 82 i~HPnv~~~~G~i~~cL~~l~~W~p~~~ 109 (138)
T 1jat_B 82 INLPCVNPTTGEVQTDFHTLRDWKRAYT 109 (138)
T ss_dssp CCCTTBCTTTCBBCTTSHHHHTCCTTCC
T ss_pred cccCCEeCCCCEEeeecccCCCCCCcCc
Confidence 7799998889999 998 78999884
No 39
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=99.61 E-value=4.8e-15 Score=111.61 Aligned_cols=91 Identities=20% Similarity=0.324 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEE-eeCCCCCCeeeeeeee-eecccceeEEEEEecCCCCCCCCCeeecCCCCCc
Q 032122 31 TQRLKEEYKALIAYTQMNKSNDNDWFRI-SAANPEGTRWTGKCWY-VHNLLKYEFDLQFDIPVTYPATAPELELPQLDGK 108 (147)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~L-ep~n~dgTrW~gkcw~-~~~~~~yeF~lefdIP~tYP~tpPeI~fPeldgk 108 (147)
..||.+||+.|.+ +....|.+ .+.+.+...|.+.+-- +++|++..|.++|.+|.+||..||.|.|-.-..|
T Consensus 6 ~~RL~kEl~~l~~-------~~~~~i~~~~~~~~~l~~w~~~I~P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (155)
T 1wzv_A 6 SMRVVKELEDLQK-------KPPPYLRNLSSDDANVLVWHALLLPDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYH 78 (155)
T ss_dssp HHHHHHHHHHHHH-------SCCTTEEEEEECSSCTTEEEEEECCCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEecCCCchheEEEEEcCCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCcc
Confidence 4799999999876 23356766 6756899999998864 8899999999999999999999999999887779
Q ss_pred ccccccCceeeec----CCcccccc
Q 032122 109 TQKMYRGGKICLT----VHFKPLWA 129 (147)
Q Consensus 109 t~kmYrgGkICL~----dHf~PlW~ 129 (147)
+|+. .+|+|||+ +.|+|.|+
T Consensus 79 PnV~-~~G~iCl~iL~~~~W~p~~~ 102 (155)
T 1wzv_A 79 PNVD-ENGQICLPIISSENWKPCTK 102 (155)
T ss_dssp TTBC-TTCBCCCGGGCTTTCCTTCC
T ss_pred CcCC-CCCeEeecCCCccCCCCCCc
Confidence 9985 59999997 67999874
No 40
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=99.59 E-value=4.2e-15 Score=113.36 Aligned_cols=90 Identities=18% Similarity=0.247 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceEEe-eCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCC
Q 032122 29 AWTQRLKEEYKALIAYTQMNKSNDNDWFRIS-AANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQL 105 (147)
Q Consensus 29 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Le-p~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPel 105 (147)
....||.+||+.| ++ ...+.+. |.+++...|.+.+ + .++|++-.|.++|.+|.+||..||.|.|-.-
T Consensus 6 ~~~~RL~kEl~~l------~~---~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 75 (160)
T 1y8x_A 6 AAQLRIQKDINEL------NL---PKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETM 75 (160)
T ss_dssp HHHHHHHHHHHTC------CC---CTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSC
T ss_pred HHHHHHHHHHHhc------CC---CCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecC
Confidence 4689999999998 11 3457776 6568999999988 7 8999999999999999999999999999877
Q ss_pred CCcccccccCceeeec---CCcccccc
Q 032122 106 DGKTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 106 dgkt~kmYrgGkICL~---dHf~PlW~ 129 (147)
..|+|+. .+|+|||+ ++|+|.|+
T Consensus 76 i~HPnv~-~~G~iCl~iL~~~W~p~~~ 101 (160)
T 1y8x_A 76 VYHPNID-LEGNVCLNILREDWKPVLT 101 (160)
T ss_dssp CCBTTBC-TTCBBCCGGGTTTCCTTCC
T ss_pred CccCcCC-CCCeEEcccchhhccCCCC
Confidence 7799985 58999998 78999874
No 41
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.59 E-value=6.3e-16 Score=121.19 Aligned_cols=97 Identities=15% Similarity=0.208 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee---eecccc-----------eeEEEEEecCCCCC
Q 032122 29 AWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY---VHNLLK-----------YEFDLQFDIPVTYP 94 (147)
Q Consensus 29 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~---~~~~~~-----------yeF~lefdIP~tYP 94 (147)
.-..||.+||+.|.+-- ..+..+|++.|++++...|.+.+.| .++|++ -.|.|+|.+|.+||
T Consensus 27 ~a~~RL~kEl~~l~~~~----~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP 102 (186)
T 1zuo_A 27 QASDRLMKELRDIYRSQ----SYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFP 102 (186)
T ss_dssp HHHHHHHHHHHHHHTSH----HHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTT
T ss_pred HHHHHHHHHHHHHHhCC----CCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCC
Confidence 46799999999987511 0014788888878899999999997 589988 79999999999999
Q ss_pred CCCCeeecCCCCCcccccccCceeeec----CCcccccc
Q 032122 95 ATAPELELPQLDGKTQKMYRGGKICLT----VHFKPLWA 129 (147)
Q Consensus 95 ~tpPeI~fPeldgkt~kmYrgGkICL~----dHf~PlW~ 129 (147)
..||.|+|-.-..|+|-.|.+|+|||+ +.|+|.|+
T Consensus 103 ~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~t 141 (186)
T 1zuo_A 103 FDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYS 141 (186)
T ss_dssp SSCCEEEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSC
T ss_pred CCCCeEEEeCCccCCCccCCCCcEEeccCCCCCCCCcCc
Confidence 999999997666798645689999997 57999874
No 42
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=99.59 E-value=7.7e-16 Score=116.57 Aligned_cols=88 Identities=15% Similarity=0.245 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCCcc
Q 032122 32 QRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKT 109 (147)
Q Consensus 32 ~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeldgkt 109 (147)
.||.+||+.|.+ + -+.+.+.+++...|.+.+-| +++|++..|.++|.+|..||..||.|+|-.-..|+
T Consensus 5 ~Rl~kEl~~l~~---~-------~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 74 (152)
T 2onu_A 5 TRKQCDFTKLIM---A-------GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHP 74 (152)
T ss_dssp CHHHHTHHHHHH---H-------TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred HHHHHHHHhcCc---C-------CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccC
Confidence 599999999876 1 24556656889999999988 89999999999999999999999999998777799
Q ss_pred cccccCceeeec---CCcccccc
Q 032122 110 QKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 110 ~kmYrgGkICL~---dHf~PlW~ 129 (147)
|+-..+|+|||+ +.|+|.|+
T Consensus 75 ni~~~~G~iCl~il~~~W~p~~~ 97 (152)
T 2onu_A 75 NVDEASGSVCLDVINQTWTPLYS 97 (152)
T ss_dssp TBCTTTCBBCHHHHHHHCCTTCC
T ss_pred cCcCcCCeEecccccccCCCCCC
Confidence 998889999998 68999874
No 43
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=99.58 E-value=3e-15 Score=113.78 Aligned_cols=92 Identities=17% Similarity=0.173 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCC-----CCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeec
Q 032122 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAAN-----PEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELEL 102 (147)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n-----~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~f 102 (147)
=.+||.+||+.|.+ +..+.|.+.|.. .+...|.+.+-| +++|++-.|.++|.+|..||..||.|.|
T Consensus 8 a~~RL~kE~~~l~~-------~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f 80 (161)
T 2grr_A 8 ALSRLAQERKAWRK-------DHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKF 80 (161)
T ss_dssp HHHHHHHHHHHHHH-------SCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEE
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEE
Confidence 46899999999876 234566665532 478999999988 8899999999999999999999999999
Q ss_pred CCCCCcccccccCceeeec---C--Ccccccc
Q 032122 103 PQLDGKTQKMYRGGKICLT---V--HFKPLWA 129 (147)
Q Consensus 103 Peldgkt~kmYrgGkICL~---d--Hf~PlW~ 129 (147)
-.--.|+|+. .+|+|||+ . .|+|.|+
T Consensus 81 ~t~i~HPnv~-~~G~iCl~iL~~~~~W~p~~~ 111 (161)
T 2grr_A 81 EPPLFHPNVY-PSGTVCLSILEEDKDWRPAIT 111 (161)
T ss_dssp SSCCCSTTBC-TTSBBCCGGGCTTTTCCTTCC
T ss_pred ecCcccCCCC-CCCeEeehhcCCCCCcCCCCc
Confidence 8766699986 89999998 2 6999874
No 44
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.57 E-value=5.2e-15 Score=114.75 Aligned_cols=93 Identities=16% Similarity=0.150 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCc-eEEeeCC-CC--CCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecC
Q 032122 30 WTQRLKEEYKALIAYTQMNKSNDNDW-FRISAAN-PE--GTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELP 103 (147)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dw-f~Lep~n-~d--gTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fP 103 (147)
-..||.+||+.|.+ +..+. +.+.+++ +| ...|.+.+-| +++|++..|.++|.+|.+||..||.|+|-
T Consensus 36 ~~~RL~kEl~~l~~-------~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~ 108 (170)
T 2hlw_A 36 RNFRLLEELEEGQK-------GVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFV 108 (170)
T ss_dssp HHHHHHHHHHHHHH-------CCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEEC
T ss_pred HHHHHHHHHHHHHh-------CCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEe
Confidence 46899999999876 12233 6676644 33 8899999998 89999999999999999999999999998
Q ss_pred CCCCcccccccCceeeec-----CCcccccc
Q 032122 104 QLDGKTQKMYRGGKICLT-----VHFKPLWA 129 (147)
Q Consensus 104 eldgkt~kmYrgGkICL~-----dHf~PlW~ 129 (147)
.-..|+|+-..+|+|||+ +.|+|.|+
T Consensus 109 T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~t 139 (170)
T 2hlw_A 109 TKINMNGVNSSNGVVDPRAISVLAKWQNSYS 139 (170)
T ss_dssp BCCCCSSBCSSSCBBCTTTCHHHHTCCSSCC
T ss_pred cccccCCEeCCCCEEEhhhcCCCCCCCccCc
Confidence 777899998899999954 78999874
No 45
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=99.57 E-value=7e-15 Score=111.91 Aligned_cols=92 Identities=15% Similarity=0.154 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCC-CCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCC
Q 032122 29 AWTQRLKEEYKALIAYTQMNKSNDNDWFRISAAN-PEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQL 105 (147)
Q Consensus 29 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n-~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPel 105 (147)
.=..||.+||+.|.+ +..+.+.+.+.+ .+...|.+.+ + .++|++..|.++|.+|.+||..||.|+|-.-
T Consensus 14 ~~~~RL~kEl~~l~~-------~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 85 (167)
T 3fn1_B 14 VRDKLLVKEVAELEA-------NLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTK 85 (167)
T ss_dssp HHHHHHHHHHHHHGG-------GSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSC
T ss_pred HHHHHHHHHHHHHHh-------CCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCC
Confidence 347899999999876 234567777544 6799999998 6 8899999999999999999999999999877
Q ss_pred CCcccccccCceeeec---C------Ccccccc
Q 032122 106 DGKTQKMYRGGKICLT---V------HFKPLWA 129 (147)
Q Consensus 106 dgkt~kmYrgGkICL~---d------Hf~PlW~ 129 (147)
-.|+|+- .+|+|||+ . .|+|.|+
T Consensus 86 i~HPnv~-~~G~iCl~iL~~~~~~~~~W~p~~~ 117 (167)
T 3fn1_B 86 IWHPNIT-ETGEICLSLLREHSIDGTGWAPTRT 117 (167)
T ss_dssp CCCSSBC-TTCCBCCGGGSBCSSSTTSBCTTCC
T ss_pred cccCCCC-CCCEEechhhccCCCCCCCCCCcCc
Confidence 7799994 89999997 3 5999875
No 46
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=99.56 E-value=1.1e-14 Score=113.50 Aligned_cols=91 Identities=16% Similarity=0.208 Sum_probs=78.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCceEEe-eCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCC
Q 032122 28 AAWTQRLKEEYKALIAYTQMNKSNDNDWFRIS-AANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQ 104 (147)
Q Consensus 28 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Le-p~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPe 104 (147)
.....||.+||+.| ++ .+.+++. |.+++...|.+.+ + .++|++..|.++|.+|.+||..||.|.|-.
T Consensus 25 ~~~~~RL~kEl~~l------~~---~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t 94 (180)
T 2nvu_C 25 SAAQLRIQKDINEL------NL---PKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCET 94 (180)
T ss_dssp CHHHHHHHHHHHTC------CC---CTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECS
T ss_pred cHHHHHHHHHHHhc------CC---CCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceec
Confidence 45789999999998 11 3457776 6568999999998 7 899999999999999999999999999987
Q ss_pred CCCcccccccCceeeec---CCcccccc
Q 032122 105 LDGKTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 105 ldgkt~kmYrgGkICL~---dHf~PlW~ 129 (147)
-..|+|+. .+|+|||+ ++|+|.|+
T Consensus 95 ~i~HPNV~-~~G~iCl~iL~~~W~p~~~ 121 (180)
T 2nvu_C 95 MVYHPNID-LEGNVALNILREDWKPVLT 121 (180)
T ss_dssp CCCBTTBC-TTSBBCCGGGTTSCCTTCC
T ss_pred cCccCCCC-CCCcEEcccccccCCCCCC
Confidence 77799985 68999997 78999884
No 47
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=99.55 E-value=8.4e-15 Score=114.93 Aligned_cols=91 Identities=14% Similarity=0.143 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceEEe----eCCCCCC---eeeeeeee-eecccceeEEEEEecCCCCCCCCCee
Q 032122 29 AWTQRLKEEYKALIAYTQMNKSNDNDWFRIS----AANPEGT---RWTGKCWY-VHNLLKYEFDLQFDIPVTYPATAPEL 100 (147)
Q Consensus 29 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Le----p~n~dgT---rW~gkcw~-~~~~~~yeF~lefdIP~tYP~tpPeI 100 (147)
.=..||.+||+.|. ....+.+. |.++|.. .|.+.+-. .++|++..|.++|.+|.+||..||.|
T Consensus 29 ~a~~RL~kEl~~l~---------~~~~i~~~~~~~p~~~nl~~~~~w~~~I~p~~tpyegg~f~~~i~fp~~YP~~PP~v 99 (190)
T 3o2u_A 29 AARIRLKRDLDSLD---------LPPTVTLNVITSPDSADRSQSPKLEVIVRPDEGYYNYGSINFNLDFNEVYPIEPPKV 99 (190)
T ss_dssp HHHHHHHHHHHTCC---------CCTTEEEEEEECTTCCCTTSCCEEEEEECCSSSTTTTCCEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHhcc---------CCCCEEEEecCCCCCccCCcCCeEEEEEcCCCCCCCCCEEEEEEECCCCCCCCCcee
Confidence 35899999999975 23567776 6568888 99999866 79999999999999999999999999
Q ss_pred ecCCCCCcccccccCceeeec---CCcccccc
Q 032122 101 ELPQLDGKTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 101 ~fPeldgkt~kmYrgGkICL~---dHf~PlW~ 129 (147)
+|..-..|+|+. .+|+|||+ +.|+|.|+
T Consensus 100 ~f~t~i~HPnV~-~~G~iCl~iL~~~W~p~~~ 130 (190)
T 3o2u_A 100 VCLKKIFHPNID-LKGNVCLNILREDWSPALD 130 (190)
T ss_dssp EECSCCCCTTBC-TTSBBCCGGGTTTCCTTCC
T ss_pred EEecCcccCCCC-CCCeEechhccCCCCCCCC
Confidence 998877899994 79999998 88999875
No 48
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=99.54 E-value=6.7e-15 Score=115.30 Aligned_cols=90 Identities=14% Similarity=0.214 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 032122 29 AWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (147)
Q Consensus 29 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeld 106 (147)
....||.+||+.|.+ +-+.+.+. +|...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.-.
T Consensus 25 ~a~~RL~kEl~~l~~----------~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i 93 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIE----------SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKI 93 (179)
T ss_dssp HHHHHHHHHHHHHHH----------SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred HHHHHHHHHHHhcCc----------CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCC
Confidence 368999999999974 22555663 478999999988 89999999999999999999999999998777
Q ss_pred CcccccccCceeeec---CCcccccc
Q 032122 107 GKTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 107 gkt~kmYrgGkICL~---dHf~PlW~ 129 (147)
.|+|+.-.+|+|||+ +.|+|.|+
T Consensus 94 ~HPNV~~~~G~ICL~iL~~~WsP~~t 119 (179)
T 2z5d_A 94 FHPNIDEASGTVCLDVINQTWTALYD 119 (179)
T ss_dssp CBTTBCTTTCBBCHHHHHHHCCTTCC
T ss_pred ccCcCCCCCCeEeccccccCCCCCCC
Confidence 799995459999998 78999885
No 49
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=99.53 E-value=2.5e-14 Score=109.46 Aligned_cols=93 Identities=12% Similarity=0.142 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCC-C--CCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCC
Q 032122 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAAN-P--EGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQ 104 (147)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n-~--dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPe 104 (147)
=..||.+||+.|.+ + .....+++.+++ + +...|.+.+-| +++|++..|.++|.+|.+||..||.|+|-.
T Consensus 22 ~~~RL~kEl~~l~~----~--~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t 95 (156)
T 2q0v_A 22 RSFRLLDELERGQK----G--NVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDT 95 (156)
T ss_dssp HHHHHHHHHHHHHC----C---CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESB
T ss_pred HHHHHHHHHHHHHh----C--CCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEc
Confidence 35899999999865 1 134577777754 2 38999999998 899999999999999999999999999987
Q ss_pred CCCcccccccCcee---eec--CCcccccc
Q 032122 105 LDGKTQKMYRGGKI---CLT--VHFKPLWA 129 (147)
Q Consensus 105 ldgkt~kmYrgGkI---CL~--dHf~PlW~ 129 (147)
-..|+|+ |.+|+| ||+ ..|+|.|+
T Consensus 96 ~i~HPNV-~~~G~icisCL~iL~~WsP~~t 124 (156)
T 2q0v_A 96 KIEMSCV-DNCGRVIKNNLHILKNWNRNYT 124 (156)
T ss_dssp CCCCTTB-CTTSBBCGGGSHHHHTCCTTCC
T ss_pred ccccCCC-ccCCeEehhhcccccCCCCcCc
Confidence 7779998 467999 887 46999874
No 50
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=99.53 E-value=1.1e-14 Score=112.73 Aligned_cols=89 Identities=15% Similarity=0.227 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q 032122 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDG 107 (147)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeldg 107 (147)
...||.+||+.|.+ + . +.+.+ +++...|.+.+-| +++|++..|.++|.+|.+||..||.|+|-.-..
T Consensus 13 ~~~RL~~El~~l~~----~---~---~~v~~-~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~ 81 (171)
T 1yf9_A 13 SNRRREMDYMRLCN----S---T---RKVYP-SDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRIL 81 (171)
T ss_dssp CCHHHHHHHHHHHS----S---S---SCEEE-CSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHHh----C---C---CCCCC-CCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcc
Confidence 45899999999875 1 1 12334 6899999999998 899999999999999999999999999987777
Q ss_pred cccccccCceeeec---CCcccccc
Q 032122 108 KTQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 108 kt~kmYrgGkICL~---dHf~PlW~ 129 (147)
|+|+-..+|+|||+ ++|+|.|+
T Consensus 82 HPNi~~~~G~iCl~iL~~~W~p~~~ 106 (171)
T 1yf9_A 82 HPNVDERSGSVCLDVINQTWTPMYQ 106 (171)
T ss_dssp BTTBCTTTCBBCHHHHHHHCCTTCC
T ss_pred cccCcccCCeEeccccccCCCCCCc
Confidence 99997789999998 68999885
No 51
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.53 E-value=2e-14 Score=122.82 Aligned_cols=91 Identities=15% Similarity=0.226 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCCc
Q 032122 31 TQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDGK 108 (147)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPeI~fPeldgk 108 (147)
.+||.+||+.|.+ +....+++.|.+++...|.+.+-| ++||++-.|.+++.+|..||..||.|+|-.-..|
T Consensus 5 ~~RL~kEl~~l~~-------~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 77 (399)
T 4ddg_A 5 LKRIHKELNDLAR-------DPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 77 (399)
T ss_dssp HHHHHHHHHHHHH-------SCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCC
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccc
Confidence 5899999999887 334567888877899999999998 8999999999999999999999999999887789
Q ss_pred ccccccCceeeec---CCcccccc
Q 032122 109 TQKMYRGGKICLT---VHFKPLWA 129 (147)
Q Consensus 109 t~kmYrgGkICL~---dHf~PlW~ 129 (147)
+|+. .+|+|||+ +.|+|.|+
T Consensus 78 Pnv~-~~G~iCl~il~~~W~p~~~ 100 (399)
T 4ddg_A 78 PNIN-SNGSISLDILRSQWSPALT 100 (399)
T ss_dssp TTBC-TTCBBCCGGGTTSCCTTCC
T ss_pred cccC-CCCeEeCcccccCCCcccc
Confidence 9985 79999998 78999985
No 52
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=99.51 E-value=1.2e-14 Score=109.36 Aligned_cols=90 Identities=20% Similarity=0.313 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCceEEee-CCCCCCeeeeeeee-eecccceeEEEEEecCCCCCCCCCeeecCCCCCcc
Q 032122 32 QRLKEEYKALIAYTQMNKSNDNDWFRISA-ANPEGTRWTGKCWY-VHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKT 109 (147)
Q Consensus 32 ~RLkeEY~aLikyv~~nk~~d~dwf~Lep-~n~dgTrW~gkcw~-~~~~~~yeF~lefdIP~tYP~tpPeI~fPeldgkt 109 (147)
.||.+||+.|.+ +....|.+.+ .+.+...|.+.+-- +++|++..|.++|.+|.+||..||.|.|-.-..|+
T Consensus 5 ~RL~kEl~~l~~-------~~~~~~~~~~~~~~~l~~w~~~i~P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 77 (154)
T 1c4z_D 5 RRLMKELEEIRK-------CGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHP 77 (154)
T ss_dssp TTHHHHHTTCSS-------SCCSSCEEECSSCSSSSEEEEEECCCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred HHHHHHHHHHHh-------CCCCCEEEeeCCCCchheEEEEEeCCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccc
Confidence 599999998754 2335565433 34789999998753 78999999999999999999999999998777799
Q ss_pred cccccCceeeec----CCcccccc
Q 032122 110 QKMYRGGKICLT----VHFKPLWA 129 (147)
Q Consensus 110 ~kmYrgGkICL~----dHf~PlW~ 129 (147)
|+. .+|+|||+ ++|+|.|+
T Consensus 78 nv~-~~G~iCl~iL~~~~W~p~~~ 100 (154)
T 1c4z_D 78 NID-EKGQVCLPVISAENWKPATK 100 (154)
T ss_dssp TBC-TTCBBCCTTTSSSSCCTTCC
T ss_pred cCC-CCCEEECCCCCCCCCCCCCc
Confidence 986 69999997 68999874
No 53
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.50 E-value=1.3e-13 Score=117.34 Aligned_cols=104 Identities=18% Similarity=0.235 Sum_probs=83.0
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCe
Q 032122 22 AGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPE 99 (147)
Q Consensus 22 agprd~~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~--~~~~~~yeF~lefdIP~tYP~tpPe 99 (147)
++......+..||.+||+.|.+-.-. .-...+.+.+.+++...|.+.+-| +++|++-.|.|+|.+|.+||..||.
T Consensus 69 ~~~~~s~~~~kRL~kEl~~L~k~~p~---g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~ 145 (323)
T 3ceg_A 69 ANDANSAARARRLAQEAVTLSTSLPL---SSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPL 145 (323)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHCCC---CSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCE
T ss_pred cCCCCCHHHHHHHHHHHHHHHhCCCC---CcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCe
Confidence 45556678999999999999873211 112244444545789999999988 8999999999999999999999999
Q ss_pred eecCCC-----CCcccccccCceeeec----------CCcccccc
Q 032122 100 LELPQL-----DGKTQKMYRGGKICLT----------VHFKPLWA 129 (147)
Q Consensus 100 I~fPel-----dgkt~kmYrgGkICL~----------dHf~PlW~ 129 (147)
|.|..- -.|+|+ |.+|+|||+ +.|+|.++
T Consensus 146 V~F~T~~g~~~ifHPNV-~~~G~ICLsiL~~~~g~~~e~WsPa~s 189 (323)
T 3ceg_A 146 VNLETTGGHSVRFNPNL-YNDGKVCLSILNTWHGRPEEKWNPQTS 189 (323)
T ss_dssp EEECCSTTTTCCCBTTB-CTTCBBCCGGGTSSCCCGGGSCCTTTC
T ss_pred EEEeccCCCcccccCCC-CcCCeEechhhccccCCCcCCCCcCcC
Confidence 999875 349998 489999996 37999883
No 54
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=97.96 E-value=9.9e-06 Score=63.07 Aligned_cols=64 Identities=19% Similarity=0.222 Sum_probs=46.9
Q ss_pred CCCCeeeeeeee---eecccc---eeEEEEEecCCCCCCCCCeeecCC--CCC---------cccccccCceeeec--CC
Q 032122 63 PEGTRWTGKCWY---VHNLLK---YEFDLQFDIPVTYPATAPELELPQ--LDG---------KTQKMYRGGKICLT--VH 123 (147)
Q Consensus 63 ~dgTrW~gkcw~---~~~~~~---yeF~lefdIP~tYP~tpPeI~fPe--ldg---------kt~kmYrgGkICL~--dH 123 (147)
.||+.=.=.||. ..+|.+ |.|.|+|-||.+||..||.+-|-. .++ |.++ ...|+|||+ .+
T Consensus 57 ~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~~~~~~I~~hpnV-D~~G~I~lpyL~~ 135 (162)
T 3r3q_A 57 SDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYI-DSNGWIALPILHA 135 (162)
T ss_dssp TTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTTTSCTTSTHHHHB-CTTSBBCCGGGGS
T ss_pred CCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccccccccccCCCCCC-CCCCcEeCccccc
Confidence 467643334444 456665 889999999999999999998832 332 5666 468999998 78
Q ss_pred cccc
Q 032122 124 FKPL 127 (147)
Q Consensus 124 f~Pl 127 (147)
|+|.
T Consensus 136 W~p~ 139 (162)
T 3r3q_A 136 WDPA 139 (162)
T ss_dssp CCGG
T ss_pred CCCC
Confidence 9883
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=97.11 E-value=0.00037 Score=53.38 Aligned_cols=63 Identities=22% Similarity=0.158 Sum_probs=46.9
Q ss_pred CCCCeeeeeeeeeecccceeEEEEEecCCCCCCCCCeeec-CCCCC----cccccccCceeeec--CCccc
Q 032122 63 PEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELEL-PQLDG----KTQKMYRGGKICLT--VHFKP 126 (147)
Q Consensus 63 ~dgTrW~gkcw~~~~~~~yeF~lefdIP~tYP~tpPeI~f-Peldg----kt~kmYrgGkICL~--dHf~P 126 (147)
.++-.|.|.+=-.+.-..|.+-|.|-||.+||..||-+-+ |..++ |.++ ...|+|||. .+|++
T Consensus 51 ~~LL~l~GtIpv~y~g~~y~iPi~Iwlp~~YP~~pP~vfv~pt~~m~I~~~~~V-d~~G~i~lpyL~~W~~ 120 (146)
T 3obq_A 51 RELMNLTGTIPVPYRGNTYNIPICLWLLDTYPYNPPICFVKPTSSMTIKTGKHV-DANGKIYLPYLHEWKH 120 (146)
T ss_dssp CEEEEEEEEEEEECSSCEEEEEEEEECCTTTTTSCCEEEECCCTTEEECCBTTB-CTTCBBCCHHHHTCCT
T ss_pred heEEEEEEEeeeeecCccccceEEEEeCccCCCCCCEEEEeCCCCCEECCCCCC-CCCCCEecccccccCC
Confidence 5666788887655555667888899999999999999965 33333 4554 458999998 66887
No 56
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=94.76 E-value=0.12 Score=36.77 Aligned_cols=22 Identities=36% Similarity=0.797 Sum_probs=20.2
Q ss_pred eeEEEEEecCCCCCCCCCeeec
Q 032122 81 YEFDLQFDIPVTYPATAPELEL 102 (147)
Q Consensus 81 yeF~lefdIP~tYP~tpPeI~f 102 (147)
-.+.|.|..|.+||.+||.|.+
T Consensus 63 ~~~~L~v~~p~~YP~~~P~i~l 84 (137)
T 1ukx_A 63 VQVELRVKCPPTYPDVVPEIDL 84 (137)
T ss_dssp CEEEEEECCCTTTTSSCCCCEE
T ss_pred eEEEEEEECCCCCCCCCCcEEE
Confidence 3689999999999999999987
No 57
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.20 E-value=0.031 Score=39.50 Aligned_cols=23 Identities=30% Similarity=0.488 Sum_probs=20.7
Q ss_pred eeEEEEEecCCCCCCCCCeeecC
Q 032122 81 YEFDLQFDIPVTYPATAPELELP 103 (147)
Q Consensus 81 yeF~lefdIP~tYP~tpPeI~fP 103 (147)
..+.|.|..|.+||.+||.|.+-
T Consensus 55 ~~~~L~v~~p~~YP~~~P~i~l~ 77 (128)
T 2ebm_A 55 VQTTLKFTYSEKYPDEAPLYEIF 77 (128)
T ss_dssp CBEEEEEECCSSTTTSCCEEEEE
T ss_pred eeEEEEEEeCCCCCCCCceEEEE
Confidence 37899999999999999999873
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=93.45 E-value=0.054 Score=38.83 Aligned_cols=25 Identities=36% Similarity=0.672 Sum_probs=21.8
Q ss_pred ceeEEEEEecCCCCCCCCCeeecCC
Q 032122 80 KYEFDLQFDIPVTYPATAPELELPQ 104 (147)
Q Consensus 80 ~yeF~lefdIP~tYP~tpPeI~fPe 104 (147)
...+.|.|..|.+||.+||.|.+-.
T Consensus 61 ~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 61 ESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp CCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred ceEEEEEEECCCCCCCCCCeEEEec
Confidence 3488999999999999999998843
No 59
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.19 E-value=0.052 Score=38.57 Aligned_cols=23 Identities=30% Similarity=0.785 Sum_probs=20.6
Q ss_pred eeEEEEEecCCCCCCCCCeeecC
Q 032122 81 YEFDLQFDIPVTYPATAPELELP 103 (147)
Q Consensus 81 yeF~lefdIP~tYP~tpPeI~fP 103 (147)
..+.|.|..|.+||.+||.|.+-
T Consensus 56 ~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 56 IPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp CEEEEEEEECSSTTSSCCCCCCC
T ss_pred eEEEEEEECCCCCCCCCCeEEEE
Confidence 37999999999999999999765
No 60
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=93.09 E-value=0.061 Score=37.99 Aligned_cols=24 Identities=25% Similarity=0.674 Sum_probs=21.1
Q ss_pred eeEEEEEecCCCCCCCCCeeecCC
Q 032122 81 YEFDLQFDIPVTYPATAPELELPQ 104 (147)
Q Consensus 81 yeF~lefdIP~tYP~tpPeI~fPe 104 (147)
-.+.|.|..|.+||.++|.|.+-.
T Consensus 59 ~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 59 VCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CEEEEEEEECSSTTSSCCEEEEEE
T ss_pred eeEEEEEEcCCCCCCCCCCeEEEc
Confidence 478999999999999999998743
No 61
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=93.01 E-value=0.056 Score=39.74 Aligned_cols=24 Identities=33% Similarity=0.621 Sum_probs=21.0
Q ss_pred eeEEEEEecCCCCCCCCCeeecCC
Q 032122 81 YEFDLQFDIPVTYPATAPELELPQ 104 (147)
Q Consensus 81 yeF~lefdIP~tYP~tpPeI~fPe 104 (147)
-.+.|.|.+|.+||.+||.|.+-.
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~ 96 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRS 96 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEEC
T ss_pred ceEEEEEECCCCCCCCCCeEEEEc
Confidence 368999999999999999998754
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.47 E-value=0.12 Score=38.49 Aligned_cols=22 Identities=36% Similarity=0.483 Sum_probs=20.1
Q ss_pred eEEEEEecCCCCCCCCCeeecC
Q 032122 82 EFDLQFDIPVTYPATAPELELP 103 (147)
Q Consensus 82 eF~lefdIP~tYP~tpPeI~fP 103 (147)
.+.|+|..|.+||.+||.|.+-
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~ 97 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGR 97 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEE
T ss_pred eEEEEEEcCCCCCCCCCcEEEE
Confidence 7899999999999999999764
No 63
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=74.68 E-value=3 Score=33.10 Aligned_cols=45 Identities=18% Similarity=0.270 Sum_probs=28.7
Q ss_pred CceEEeeCCCCCCeeeeeeeeeecccceeEEEEEecCCCCCCCCCeee
Q 032122 54 DWFRISAANPEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELE 101 (147)
Q Consensus 54 dwf~Lep~n~dgTrW~gkcw~~~~~~~yeF~lefdIP~tYP~tpPeI~ 101 (147)
.|=+|..++++.+.=+=++ .+-.+=+..|++.+|..||..||.+.
T Consensus 14 GW~~l~~id~~~~~i~l~~---~D~~gR~H~l~v~l~~~yp~~~P~~~ 58 (186)
T 3zqs_A 14 GWDKLVYADTCFSTIKLKA---EDASGREHLITLKLKAKYPAESPDYF 58 (186)
T ss_dssp CGGGEEEECTTSSEEEEEE---ECTTSCEEEEEEECCTTTTTSCCEEE
T ss_pred CCceeeeecCCccEEEEEE---EeCCCCeEEEEEEECCCCCCCCCeeE
Confidence 3444444444544433332 22233489999999999999999885
No 64
>3tgv_A Heme-binding protein HUTZ; 2.00A {Vibrio cholerae}
Probab=41.78 E-value=32 Score=24.54 Aligned_cols=64 Identities=13% Similarity=0.207 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeeeeecccceeEEEEEecCCCCCCCCCeeecCCCCCccccc
Q 032122 33 RLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTQKM 112 (147)
Q Consensus 33 RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~~~~~~~yeF~lefdIP~tYP~tpPeI~fPeldgkt~km 112 (147)
||.+|.+++++ +. ....|..+++||..+-+-.|+...-.+.-|-+ -++..|+.-+
T Consensus 2 ~L~~ei~~fl~---~~-----~~~~LaT~~~~G~P~~s~v~~~~~~~~~~~~~-----------------s~~~~~~~nl 56 (148)
T 3tgv_A 2 RLEPEIKEFRQ---ER-----KTLQLATVDAQGRPNVSYAPFVQNQEGYFVLI-----------------SHIARHARNL 56 (148)
T ss_dssp CHHHHHHHHHH---HC-----CEEEEEEECTTCCEEEEEEEEEEETTEEEEEE-----------------ETTSHHHHHH
T ss_pred CchHHHHHHHh---hC-----CEEEEEEECCCCCEEEEEEEEEEECCEEEEEE-----------------CCccHHHHHH
Confidence 68888777665 22 45578777889999999999865433222211 1344477777
Q ss_pred ccCceeeec
Q 032122 113 YRGGKICLT 121 (147)
Q Consensus 113 YrgGkICL~ 121 (147)
-+..++||.
T Consensus 57 ~~~prvsl~ 65 (148)
T 3tgv_A 57 EVNPQVSIM 65 (148)
T ss_dssp HHSCEEEEE
T ss_pred HhCCCeEEE
Confidence 777777664
No 65
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=36.72 E-value=22 Score=25.13 Aligned_cols=16 Identities=25% Similarity=0.210 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHH
Q 032122 30 WTQRLKEEYKALIAYT 45 (147)
Q Consensus 30 w~~RLkeEY~aLikyv 45 (147)
=++++||+|..+++|+
T Consensus 73 ~V~~~Ke~Yl~~rr~~ 88 (93)
T 3t98_B 73 NVKVLKEQYLSYRKMF 88 (93)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4789999999999998
No 66
>2blf_B SORB, sulfite\:cytochrome C oxidoreductase subunit B; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_B* 2c9x_B* 2ca3_B* 2ca4_B*
Probab=24.95 E-value=93 Score=20.09 Aligned_cols=26 Identities=19% Similarity=0.377 Sum_probs=19.7
Q ss_pred CCCChhHHHH---HHH---------HHHHHHHHHHHhc
Q 032122 23 GPRDGAAWTQ---RLK---------EEYKALIAYTQMN 48 (147)
Q Consensus 23 gprd~~~w~~---RLk---------eEY~aLikyv~~n 48 (147)
+.++.+.|.. |+. +|.+.|+.||..|
T Consensus 43 ~~~~~~~W~~~v~~M~~~~g~~ls~~e~~~I~~YL~~~ 80 (81)
T 2blf_B 43 PGKGQAFWDAEVQKMIKVYHAPVDEADAKAIADYLAKT 80 (81)
T ss_dssp TTCCHHHHHHHHHHHHHTSCCCCCHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHh
Confidence 3467788985 665 5888999999765
No 67
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=20.91 E-value=54 Score=23.23 Aligned_cols=39 Identities=15% Similarity=0.050 Sum_probs=24.7
Q ss_pred CCCCCCeeecCCCCCc--ccccccCceeeecCCcccccccCCceeE
Q 032122 93 YPATAPELELPQLDGK--TQKMYRGGKICLTVHFKPLWAKNWYFCF 136 (147)
Q Consensus 93 YP~tpPeI~fPeldgk--t~kmYrgGkICL~dHf~PlW~~n~p~~~ 136 (147)
-+.++|++.++.++|+ +...|+| |+.|=. | |+-.||.|-
T Consensus 22 ~~~~~p~f~l~d~~G~~~~l~~~~G-k~vlv~-F---~atwC~~C~ 62 (187)
T 3dwv_A 22 AASSIFDFEVLDADHKPYNLVQHKG-SPLLIY-N---VASKCGYTK 62 (187)
T ss_dssp TCCSGGGSCCBBTTSCBCCGGGGTT-SCEEEE-E---ECCBCSCCT
T ss_pred CCCccCCeEEEcCCCCEeeHHHhCC-CEEEEE-E---ecCCCCCcH
Confidence 3577899999999994 4455665 554432 2 344466663
No 68
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=20.76 E-value=2.8e+02 Score=25.86 Aligned_cols=76 Identities=14% Similarity=0.166 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeeeeecccceeEEE-EEecCCCCCCCCCeeecCCCCCc
Q 032122 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWYVHNLLKYEFDL-QFDIPVTYPATAPELELPQLDGK 108 (147)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgTrW~gkcw~~~~~~~yeF~l-efdIP~tYP~tpPeI~fPeldgk 108 (147)
=+++.++.||.++..|+.. ++.||.+.......+ ..|....=.+=+.-+ -+.+-...=..++.++++-||
T Consensus 618 ~~~~~i~~YK~~R~~i~~G-----~~yrL~~p~~~~~~~--~a~~~vs~d~~~avv~~~~~~~~~~~~~~~~rl~GLd-- 688 (745)
T 3mi6_A 618 QVKKQVAFYKCYRQLFQFG-----KFYRIDSPFVEDGNV--TSWQVVSDDQKQAIAARYQLLNHPNAPYTRFYFKGLR-- 688 (745)
T ss_dssp HHHHHHHHHHHTHHHHHHS-----EEEECSCTTSTTCCE--EEEEEECTTSSEEEEEEEESSCCSSCCCEEECCCSCC--
T ss_pred HHHHHHHHHHHHhHHhccc-----cEEeeCCcccCCCCc--EEEEEEcCCCCEEEEEEEEecccCCCCccceECCCCC--
Confidence 5678889999999999887 888987622102233 344422223323323 344432221223568888775
Q ss_pred cccccc
Q 032122 109 TQKMYR 114 (147)
Q Consensus 109 t~kmYr 114 (147)
++++||
T Consensus 689 p~~~Y~ 694 (745)
T 3mi6_A 689 PNQRYQ 694 (745)
T ss_dssp TTCEEE
T ss_pred CCCeEE
Confidence 778886
No 69
>1bwd_A ADT, protein (inosamine-phosphate amidinotransferase); streptomycin; 3.10A {Streptomyces griseus} SCOP: d.126.1.2
Probab=20.53 E-value=59 Score=26.59 Aligned_cols=31 Identities=16% Similarity=0.026 Sum_probs=27.0
Q ss_pred eeeccCCCCChhHHHHHHHHHHHHHHHHHHhc
Q 032122 17 LLSTKAGPRDGAAWTQRLKEEYKALIAYTQMN 48 (147)
Q Consensus 17 l~~~~agprd~~~w~~RLkeEY~aLikyv~~n 48 (147)
|....+||.+ ..|.++..+|..++.+.|+.+
T Consensus 45 ~~~~~~g~~~-~~~~~~A~~e~~~~~~~Lr~~ 75 (348)
T 1bwd_A 45 QEQIPSGAYP-DRVLKETEEELHVLAAELTKL 75 (348)
T ss_dssp GGGSCCEECC-HHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhccCCCCC-hHHHHHHHHHHHHHHHHHHHC
Confidence 6667789877 679999999999999999876
No 70
>1rjt_A Small inducible cytokine B11; chemokine; NMR {Synthetic} SCOP: d.9.1.1
Probab=20.50 E-value=45 Score=21.79 Aligned_cols=23 Identities=13% Similarity=0.222 Sum_probs=13.7
Q ss_pred CCeeecCCCCCcccccccCceeeec
Q 032122 97 APELELPQLDGKTQKMYRGGKICLT 121 (147)
Q Consensus 97 pPeI~fPeldgkt~kmYrgGkICL~ 121 (147)
.+.+..+++..+|-. +|.+||||
T Consensus 33 ~~~C~~~~VIf~tk~--~g~~vC~d 55 (73)
T 1rjt_A 33 SNNCDKIEVIITLKE--NKGQRCLN 55 (73)
T ss_dssp TTTSSSCBCCBCCSS--SCCCCCCC
T ss_pred CCCCCCCEEEEEECc--CCCeEccC
Confidence 344545555544332 67889998
Done!