BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032124
(147 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FNP8|RS193_ARATH 40S ribosomal protein S19-3 OS=Arabidopsis thaliana GN=RPS19C PE=2
SV=1
Length = 143
Score = 222 bits (565), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 103/120 (85%), Positives = 108/120 (90%)
Query: 1 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAAS 60
M T K VKDVSPHEFVKAYAAHLKRSGKIELP W DIVKTG LKELAPYDPDWYYIRAAS
Sbjct: 1 MATGKTVKDVSPHEFVKAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAAS 60
Query: 61 MARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
MARK+YLRGGLGVG+FRRIYGG KRNGSRPPHF KSSG VARHIL QLQ NI++LD+KG
Sbjct: 61 MARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKG 120
>sp|Q9SGA6|RS191_ARATH 40S ribosomal protein S19-1 OS=Arabidopsis thaliana GN=RPS19A PE=2
SV=1
Length = 143
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/120 (84%), Positives = 109/120 (90%)
Query: 1 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAAS 60
M T K VKDVSPH+FVKAYA+HLKRSGKIELPTW DIVKTG LKELAPYDPDWYYIRAAS
Sbjct: 1 MATGKTVKDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAAS 60
Query: 61 MARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
MARK+YLRGGLGVG+FRRIYGG KRNGSRPPHF KSSG +ARHIL QL+ NI+ELD+KG
Sbjct: 61 MARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKG 120
>sp|Q9LF30|RS192_ARATH 40S ribosomal protein S19-2 OS=Arabidopsis thaliana GN=RPS19B PE=2
SV=1
Length = 143
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 100/120 (83%), Positives = 108/120 (90%)
Query: 1 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAAS 60
M T K VKDVSPH+FVKAYA+HLKRSGKIELP W DIVKTG LKELAPYDPDWYYIRAAS
Sbjct: 1 MATGKTVKDVSPHDFVKAYASHLKRSGKIELPLWTDIVKTGRLKELAPYDPDWYYIRAAS 60
Query: 61 MARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
MARKIYLRGGLGVG+FRRIYGG KRNGSRPPHF KSSG +ARHIL QL+ +I+ELD+KG
Sbjct: 61 MARKIYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMSIVELDTKG 120
>sp|P40978|RS19_ORYSJ 40S ribosomal protein S19 OS=Oryza sativa subsp. japonica GN=RPS19A
PE=3 SV=1
Length = 146
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 89/131 (67%), Positives = 106/131 (80%)
Query: 3 TAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMA 62
TA+ VKDV+PHEFVKAY+AHLKRSGK+ELP W DIVKT KEL PYDPDWYY RAAS+A
Sbjct: 5 TARTVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIA 64
Query: 63 RKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGQS 122
RKIYLR G+GVG F++IYGG +RNGSRPPHF KSSG+++R+IL QLQ II++D KG
Sbjct: 65 RKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGR 124
Query: 123 LVLVERLHKLD 133
L+ + LD
Sbjct: 125 LITSQGRRDLD 135
>sp|Q94613|RS19_MYAAR 40S ribosomal protein S19 OS=Mya arenaria GN=RPS19 PE=2 SV=1
Length = 149
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 91/128 (71%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
+VKDVS HEF +A+AA LK+SGK+++P W D VKTG KEL+PY+PDWY+IRAAS+ R +
Sbjct: 4 SVKDVSSHEFTRAFAAFLKKSGKMKVPEWTDFVKTGMFKELSPYEPDWYFIRAASICRHL 63
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGQSLVL 125
Y+R G+GSF +IYGG +R G+ P HF K++GS++R +L L+ I+E D G +
Sbjct: 64 YIRSPAGIGSFEKIYGGRRRRGTAPSHFCKANGSISRRLLQSLEGLKIVEKDPNGGRRLT 123
Query: 126 VERLHKLD 133
+ LD
Sbjct: 124 SQGRRDLD 131
>sp|Q54X51|RS19_DICDI 40S ribosomal protein S19 OS=Dictyostelium discoideum GN=rps19 PE=3
SV=1
Length = 148
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 89/132 (67%), Gaps = 1/132 (0%)
Query: 3 TAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMA 62
TA +KDV P EF+ YA LK++G++++P WNDI KT T +EL P +PDW Y R A++A
Sbjct: 4 TAVTLKDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLA 63
Query: 63 RKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDS-KGQ 121
RK+Y+RGG GV ++RR++GG +RNG RP HF+ +G R+ L QLQ+ +IE D+ KG
Sbjct: 64 RKVYIRGGDGVATYRRVFGGNRRNGVRPNHFADVNGGNIRYCLKQLQNLKVIETDAVKGG 123
Query: 122 SLVLVERLHKLD 133
+ LD
Sbjct: 124 RTITATGRRDLD 135
>sp|Q8T5Z4|RS19_BRABE 40S ribosomal protein S19 OS=Branchiostoma belcheri GN=RPS19 PE=2
SV=1
Length = 147
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 86/120 (71%)
Query: 1 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAAS 60
M VKDV+ EFVKA+AA LK+SGK++LP W D+VKT KELAPYDPDW+Y+RAAS
Sbjct: 1 MPGGVTVKDVNQQEFVKAFAAFLKKSGKLKLPEWVDLVKTAPHKELAPYDPDWFYLRAAS 60
Query: 61 MARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
AR +Y+RGG+GVG+ +IYGG KR G++P F S V+R +L L+ ++E D+ G
Sbjct: 61 TARHLYMRGGVGVGAMCKIYGGRKRRGTKPAKFRVCSRGVSRTVLQSLEGIKMVEKDAAG 120
>sp|P17074|RS19_RAT 40S ribosomal protein S19 OS=Rattus norvegicus GN=Rps19 PE=2 SV=3
Length = 145
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 82/115 (71%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFV+A AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +
Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
YLRGG GVGS +IYGG +RNG RP HFS+ S SVAR +L L+ ++E D G
Sbjct: 65 YLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDG 119
>sp|Q9CZX8|RS19_MOUSE 40S ribosomal protein S19 OS=Mus musculus GN=Rps19 PE=1 SV=3
Length = 145
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 82/115 (71%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFV+A AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +
Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
YLRGG GVGS +IYGG +RNG RP HFS+ S SVAR +L L+ ++E D G
Sbjct: 65 YLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDG 119
>sp|Q9Y0H3|RS19_MYXGL 40S ribosomal protein S19 OS=Myxine glutinosa GN=rps19 PE=2 SV=1
Length = 145
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 84/115 (73%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFVKA AA K+SGK++ P W D VK G KELAP+D DWYYIR AS+AR +
Sbjct: 5 TVKDVNQQEFVKALAAFFKKSGKLKKPDWVDTVKLGKHKELAPFDIDWYYIRTASVARHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
Y+RGG+GVG+ +IYGG +RNG+RP H+S+ S +VAR +L L+ ++E D G
Sbjct: 65 YMRGGVGVGAMTKIYGGRQRNGTRPSHYSRGSRNVARKVLQSLEMLKMVEKDPNG 119
>sp|Q5R8M9|RS19_PONAB 40S ribosomal protein S19 OS=Pongo abelii GN=RPS19 PE=2 SV=3
Length = 145
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 81/115 (70%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFV+A AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +
Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
YLRGG GVGS +IYGG +RNG P HFS+ S SVAR +L L+ ++E D G
Sbjct: 65 YLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDG 119
>sp|P39019|RS19_HUMAN 40S ribosomal protein S19 OS=Homo sapiens GN=RPS19 PE=1 SV=2
Length = 145
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 81/115 (70%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFV+A AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +
Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
YLRGG GVGS +IYGG +RNG P HFS+ S SVAR +L L+ ++E D G
Sbjct: 65 YLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDG 119
>sp|Q32PD5|RS19_BOVIN 40S ribosomal protein S19 OS=Bos taurus GN=RPS19 PE=2 SV=3
Length = 145
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 81/115 (70%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFV+A AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +
Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
YLRGG GVGS +IYGG +RNG P HFS+ S SVAR +L L+ ++E D G
Sbjct: 65 YLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDG 119
>sp|Q29308|RS19_PIG 40S ribosomal protein S19 (Fragment) OS=Sus scrofa GN=RPS19 PE=2
SV=3
Length = 136
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 81/115 (70%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFV+A AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +
Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAXHKELAPYDENWFYTRAASTARHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
YLRGG GVGS +IYGG +RNG P HFS+ S SVAR +L L+ ++E D G
Sbjct: 65 YLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDG 119
>sp|P79016|RS19B_SCHPO 40S ribosomal protein S19-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps19b PE=3 SV=2
Length = 143
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 78/115 (67%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
+VKDV +F+ AYAA LKRSGK+ P W DIVKTGT KELAPYDPDWYY+RAA++AR I
Sbjct: 5 SVKDVDAQQFINAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHI 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
YLR +GVG ++YGG G RP H SGSV R ++ L+ ++E G
Sbjct: 65 YLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNG 119
>sp|P58234|RS19A_SCHPO 40S ribosomal protein S19-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps19a PE=2 SV=1
Length = 144
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 78/115 (67%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
+VKDV +F+ AYAA LKRSGK+ P W DIVKTGT KELAPYDPDWYY+RAA++AR I
Sbjct: 5 SVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHI 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
YLR +GVG ++YGG G RP H SGSV R ++ L+ ++E G
Sbjct: 65 YLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNG 119
>sp|Q9DFR5|RS19_GILMI 40S ribosomal protein S19 OS=Gillichthys mirabilis GN=rps19 PE=2
SV=1
Length = 147
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 86/128 (67%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFV+A AA LK+SGK+++P W D+VK G KELAP D +W+YIRAAS R +
Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGRHKELAPSDENWFYIRAASTVRHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGQSLVL 125
YLRGG GVGS +IYGG +RNG P H+S+ S +VAR +L L+ +IE D G +
Sbjct: 65 YLRGGAGVGSMTKIYGGRQRNGVCPAHYSEGSKNVARKVLQALELLKMIEKDPNGGRRLT 124
Query: 126 VERLHKLD 133
+ LD
Sbjct: 125 AQGTRDLD 132
>sp|Q90YQ4|RS19_ICTPU 40S ribosomal protein S19 OS=Ictalurus punctatus GN=rps19 PE=2 SV=1
Length = 147
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 81/115 (70%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFV+A AA LK+SGK+++P W DIVK KELAP D +W+YIRAAS R +
Sbjct: 7 TVKDVNQQEFVRALAAFLKKSGKLKVPDWVDIVKLAKHKELAPCDDNWFYIRAASTVRHL 66
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
YLRGG+GVGS +IYGG KRNG P HFS S +VAR +L L+ ++E D G
Sbjct: 67 YLRGGVGVGSMIKIYGGRKRNGVCPSHFSVGSKNVARKVLQALEALKMVEKDPNG 121
>sp|P39698|RS19S_ASCSU 40S ribosomal protein S19S OS=Ascaris suum GN=RPS19S PE=2 SV=1
Length = 150
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 85/131 (64%)
Query: 1 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAAS 60
M +VKDV HE V+ A LK+SGK+++P W+D+VK G KELAP D DWYY+R AS
Sbjct: 1 MVKQPSVKDVDQHEIVRYIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTAS 60
Query: 61 MARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
+AR++Y+R GVG+ RR+YGG KR G P HF+++SGSV R L L+ +E G
Sbjct: 61 VARRLYIRSPTGVGALRRVYGGNKRRGVTPNHFARASGSVIRKALQTLEAIKWVEKHPDG 120
Query: 121 QSLVLVERLHK 131
+L ++ K
Sbjct: 121 NGRILTKQGRK 131
>sp|Q8ITC3|RS19_ARGIR 40S ribosomal protein S19 OS=Argopecten irradians GN=RPS19 PE=2
SV=1
Length = 144
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 79/115 (68%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
+VKDV H F KA AA LK+SGK+++P W I+K EL+PYD DW+Y RAAS+ R +
Sbjct: 4 SVKDVDSHTFTKALAAFLKKSGKMKIPEWATIIKLSKFNELSPYDEDWFYTRAASICRHL 63
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
Y+R GVG+ +IYG KRNG+ P H+ +SSGSVAR +L L+ ++E D+ G
Sbjct: 64 YIRSPAGVGALTKIYGDRKRNGTVPSHYCRSSGSVARRVLQALETQKLVEKDANG 118
>sp|P61155|RS19_PAGMA 40S ribosomal protein S19 OS=Pagrus major GN=rps19 PE=2 SV=1
Length = 146
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 84/128 (65%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKDV+ EFV+A AA LK+SGK+++P W D+VK G KELAP D +W+YIR+AS R +
Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGKHKELAPSDENWFYIRSASTVRHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGQSLVL 125
YLRGG GVGS +IYG +RNG P H+S S +VAR +L L+ +IE D G +
Sbjct: 65 YLRGGAGVGSMTKIYGSRQRNGVCPAHYSVGSKNVARKVLQALELLKMIEKDPNGGRRLT 124
Query: 126 VERLHKLD 133
+ LD
Sbjct: 125 AQGTRDLD 132
>sp|O15631|RS19_ENTHI 40S ribosomal protein S19 OS=Entamoeba histolytica GN=RPS19 PE=2
SV=1
Length = 148
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 80/123 (65%)
Query: 1 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAAS 60
M N+KDV +F+KAYA HLK+SGK+E+P W D VKTG KELAP +PDW YIRAA+
Sbjct: 1 MHHFSNIKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAA 60
Query: 61 MARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
+ARK+YL G+GV + RR YG P H + SG V R+IL QL+ I+ G
Sbjct: 61 IARKVYLNNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMGIVGKIQSG 120
Query: 121 QSL 123
+SL
Sbjct: 121 RSL 123
>sp|O18650|RS19_CAEEL 40S ribosomal protein S19 OS=Caenorhabditis elegans GN=rps-19 PE=2
SV=1
Length = 146
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 82/125 (65%), Gaps = 1/125 (0%)
Query: 1 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAAS 60
M A ++KDV HE K+ A LK+SGK+++P W+D+VK G KELAP DPDW+Y RAAS
Sbjct: 1 MTRATSIKDVDQHEATKSIAHFLKKSGKVKVPEWSDLVKLGVNKELAPVDPDWFYTRAAS 60
Query: 61 MARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
+AR +Y R G+G+F+++YGG KR G P HF S+G+ R + QL+ +E G
Sbjct: 61 LARHLYFRPA-GIGAFKKVYGGNKRRGVAPNHFQTSAGNCLRKAVQQLEKIKWVEKHPDG 119
Query: 121 QSLVL 125
+ +L
Sbjct: 120 KGRIL 124
>sp|P24494|RS19G_ASCSU 40S ribosomal protein S19G OS=Ascaris suum GN=RPS19G PE=2 SV=1
Length = 148
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 82/128 (64%)
Query: 1 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAAS 60
M A +VKDV HE V+ A LK+SGK+++P W+D+ K G KELAP + DWYY+R AS
Sbjct: 1 MVKATSVKDVDQHEIVQHIAKFLKKSGKVKVPEWSDVTKMGISKELAPLNSDWYYVRTAS 60
Query: 61 MARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
+AR++Y+R GV + R +YGG KR G P HF+K+SGSV R L L+ ++ G
Sbjct: 61 IARRLYVRSPTGVDALRLVYGGSKRRGVVPNHFAKASGSVIRKALQTLEAIKWVQKHPDG 120
Query: 121 QSLVLVER 128
VL ++
Sbjct: 121 NGRVLTKQ 128
>sp|P27073|RS19_EMENI 40S ribosomal protein S19 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rps19 PE=3
SV=1
Length = 148
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 74/114 (64%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
V+DV +F+ AYAA LKR GK+ +P W D VKT EL P D DWYY+RAA++AR I
Sbjct: 5 TVRDVDAQKFIVAYAAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWYYVRAAAVARHI 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSK 119
YLR +GVG R+++G K GSRP H +SG+V R +L L+ ++E D +
Sbjct: 65 YLRKTVGVGRLRKVHGSTKNRGSRPAHHVDASGAVDRKVLQSLEKIGVLEQDEE 118
>sp|P39018|RS19A_DROME 40S ribosomal protein S19a OS=Drosophila melanogaster GN=RpS19a
PE=2 SV=3
Length = 156
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 71/110 (64%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VKD+ H KA A LK++GK+++P DIVKT KELAPYDPDW+Y+R AS+ R +
Sbjct: 5 TVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIE 115
Y R GVGS +IYGG KRNG P HF +++ AR L L+ ++E
Sbjct: 65 YHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVE 114
>sp|P07281|RS19B_YEAST 40S ribosomal protein S19-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS19B PE=1 SV=2
Length = 144
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPD-WYYIRAASMARK 64
+V+DV+ +F+ AYA+ L+R GK+E+P + DIVKT + E+ P D + W+Y RAAS+AR
Sbjct: 5 SVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARH 64
Query: 65 IYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
IY+R +GVG ++YGG K G RP +SGS+ R +L L+ I+E+ KG
Sbjct: 65 IYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKG 120
>sp|P07280|RS19A_YEAST 40S ribosomal protein S19-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS19A PE=1 SV=2
Length = 144
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPD-WYYIRAASMARK 64
+V+DV+ +F+ AYA+ L+R GK+E+P + DIVKT + E+ P D + W+Y RAAS+AR
Sbjct: 5 SVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARH 64
Query: 65 IYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG 120
IY+R +GVG ++YGG K G RP +SGS+ R +L L+ I+E+ KG
Sbjct: 65 IYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKG 120
>sp|Q7KS38|RS19B_DROME 40S ribosomal protein S19b OS=Drosophila melanogaster GN=RpS19b
PE=1 SV=3
Length = 155
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 65/110 (59%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
VK++ H K AA LK+SGKI +P +KTG KE AP D DW+Y R AS+ R +
Sbjct: 5 TVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHL 64
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIE 115
YLR GVG+F ++Y G KRNG RP +SS R L L+ N++E
Sbjct: 65 YLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVE 114
>sp|O27653|RS19E_METTH 30S ribosomal protein S19e OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rps19e PE=3 SV=1
Length = 145
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 71/119 (59%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
V DV + A LK K++ P W + VKTG KE P +PDW+Y+RAA++ R++
Sbjct: 3 TVYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRV 62
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGQSLV 124
Y+ G +GV S R YGG K GSRP F + SG++ R L QL+++ +I+ + G+ +
Sbjct: 63 YIDGPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLEESGLIKREENGRVIT 121
>sp|O28210|RS19E_ARCFU 30S ribosomal protein S19e OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rps19e PE=3 SV=1
Length = 147
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 4/132 (3%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
V DV +K A LK + P W VKTG KE +P DW+Y+R AS+ R++
Sbjct: 3 TVYDVPADLLIKRVAERLK--DMVAPPEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRV 60
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGQSLVL 125
Y+ G +G+ R YGG KR GS+PP F K SG++ R+ LHQL+ ++ +G+ +
Sbjct: 61 YIDGPVGIERLRTFYGGRKRRGSKPPKFRKGSGAIVRNALHQLEQLGFVKKTREGRVVTP 120
Query: 126 VER--LHKLDCE 135
+ R L K+ E
Sbjct: 121 MGRSFLDKVATE 132
>sp|P54057|RS19E_METJA 30S ribosomal protein S19e OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rps19e PE=3 SV=1
Length = 148
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
V DV + ++ A LK I +P W D VKTG +E P DW+YIR AS+ RKI
Sbjct: 3 TVYDVPADKLIQKTAEKLKEMN-IGVPEWVDFVKTGVSRERRPDQDDWWYIRCASILRKI 61
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGQSL 123
Y+ G +GV R YGG K G P HF K SG++ R L +L+ ++E +G+ +
Sbjct: 62 YIYGPVGVSRLRTAYGGRKNRGHEPEHFYKGSGNIIRKALQELEKLGLVEKTPEGRVV 119
>sp|Q9YD22|RS19E_AERPE 30S ribosomal protein S19e OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rps19e
PE=3 SV=1
Length = 153
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
Query: 6 NVKDVSPHEFVKAYAAHLK-RSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARK 64
N +V ++ A LK + +++ P W KTG KE P D DW+Y+RAAS+ RK
Sbjct: 3 NALEVPADLLIRRVARKLKEKYPQVKPPAWAYFAKTGPHKERPPTDRDWWYVRAASILRK 62
Query: 65 IYLRG-GLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTN-IIELDSKGQS 122
+Y +G+ +FR IYGG + GS P HF K+ GSV R IL QL++ ++++ +G++
Sbjct: 63 LYKSPEPIGIETFRTIYGGRQNRGSAPEHFRKAGGSVPRKILQQLEEAGLVVKVPGRGRT 122
Query: 123 L 123
+
Sbjct: 123 I 123
>sp|Q9HM21|RS19E_THEAC 30S ribosomal protein S19e OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=rps19e PE=3 SV=1
Length = 150
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 66/118 (55%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
+VK V + + LK KI P W+ VKTG +E +P + DW Y+RAA+M RK+
Sbjct: 3 SVKYVPSDLLINYVSEKLKSEKKIAEPDWSKYVKTGISREKSPVNRDWIYVRAAAMLRKL 62
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGQSL 123
Y+ G LG+ YGG GS+ H ++ S S+ R++ H+L+ ++ KG+SL
Sbjct: 63 YINGYLGISRMSSEYGGKVDRGSKRYHAAQGSRSIIRYLFHELEKAGYVQKTPKGRSL 120
>sp|Q9V0G8|RS19E_PYRAB 30S ribosomal protein S19e OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rps19e PE=1 SV=1
Length = 150
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 57/110 (51%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
V DV V+ A LK +I+ P W VKTG KE P DW+Y R AS+ R++
Sbjct: 3 TVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRV 62
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIE 115
YL G +G+ R YGG K G P F K+ GS+ R L QL+ +E
Sbjct: 63 YLDGPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAAGFVE 112
>sp|O59041|RS19E_PYRHO 30S ribosomal protein S19e OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rps19e PE=3 SV=1
Length = 150
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 57/110 (51%)
Query: 6 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKI 65
V DV V+ A LK +I+ P W VKTG KE P DW+Y R AS+ R++
Sbjct: 3 TVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRV 62
Query: 66 YLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIE 115
Y+ G +G+ R YGG K G P F K+ GS+ R L QL+ IE
Sbjct: 63 YIDGPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAAGFIE 112
>sp|Q97CU4|RS19E_THEVO 30S ribosomal protein S19e OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=rps19e PE=3 SV=1
Length = 150
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 52/92 (56%)
Query: 32 PTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPP 91
P W VKTG KE P DW Y+RAASM RK+Y+ G LG+ YGG GS+
Sbjct: 29 PNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRKLYINGYLGISRMSSEYGGKVDRGSKRY 88
Query: 92 HFSKSSGSVARHILHQLQDTNIIELDSKGQSL 123
H + S S+ R + H+L+ +++ KG+SL
Sbjct: 89 HAASGSRSITRFLFHELESAGLVQKTQKGRSL 120
>sp|P19952|RS19E_HALMA 30S ribosomal protein S19e OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rps19e PE=1
SV=3
Length = 153
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 9 DVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLR 68
DV P E ++A L IE P W + KTG +EL P D++ RAAS+ RK+ +
Sbjct: 6 DVPPEELIEALTETLADEDDIEAPDWAEFTKTGVDRELPPEQEDFWTRRAASLLRKVAVD 65
Query: 69 GGLGVGSFRRIYGGGKRNGS----RPPHFSKSSGSVARHILHQLQDTNIIE 115
G +GV + R YG K+ + RP +K SG++ R L QL+D +E
Sbjct: 66 GPVGVNALRSEYGTSKQGTTRYRVRPHQKTKGSGNIIRTALQQLEDAGYVE 116
>sp|Q8SQS8|RS19_ENCCU 40S ribosomal protein S19 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPS19 PE=1 SV=1
Length = 137
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 7 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIY 66
+ +V P +F +A ++LK + ++ +DI+KTG +E AP + DWY+ R AS+ R+I
Sbjct: 5 IYEVMPEKFNEALKSYLKSTNEVVPLQDHDIMKTGEGREQAPIEEDWYFTRMASIVRQIS 64
Query: 67 LRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIE------LDSKG 120
++G + + YG K G RP + + + +L L++ I L KG
Sbjct: 65 IKGAVTSEFLAKRYGSLKNRGCRPSKYVGAYPEIGESVLENLKNMGWINEHPKDMLTEKG 124
Query: 121 QSLV--LVERLHK 131
+++V ++E++ +
Sbjct: 125 KTIVREIIEKVRE 137
>sp|Q58495|TIAS_METJA tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=tiaS PE=3
SV=1
Length = 423
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 94 SKSSGSVARHILHQLQDTNIIELDSKGQSLVLVERLHKLDCENSN 138
++ +G VA HIL +L + E+ K ++ LVE+ +CEN+N
Sbjct: 53 TRGNGGVAIHILDELYSKDKEEI--KNITISLVEKYTDFECENTN 95
>sp|Q3AD50|HIS5_CARHZ Imidazole glycerol phosphate synthase subunit HisH
OS=Carboxydothermus hydrogenoformans (strain Z-2901 /
DSM 6008) GN=hisH PE=3 SV=1
Length = 199
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
Query: 9 DVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLR 68
D+ P E V+ +++ KI WN++V T EL PD+Y S + R
Sbjct: 99 DLIPGEVVR-----FQKAPKIPHMGWNNLVPVDTTHELFKNLPDYYVYFVHSYYAQTDSR 153
Query: 69 GGLGVGSFRRIYGGGKRNGSRP--PHFSKSSGSVARHILHQLQD 110
L + + R GS + SG V R IL L++
Sbjct: 154 YVLAYTEYGEKFPAAVRRGSIIGFQFHPEKSGPVGRQILKNLRE 197
>sp|P46894|AROC_PROMA Chorismate synthase OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=aroC PE=3 SV=2
Length = 362
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 18/75 (24%)
Query: 74 GSFRRIYG-----GGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGQSLVLVER 128
G++ YG GG R +R ++G++A+ +L ++Q+T I L V+R
Sbjct: 108 GTYHLKYGIQAPSGGGRASARETIGRVAAGAIAKQLLQKVQNTQI---------LAWVKR 158
Query: 129 LHKLDCENSNGMDIN 143
+H ++ E +DIN
Sbjct: 159 IHNIEAE----IDIN 169
>sp|Q09146|HBA1_SCHPO Brefeldin A resistance protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=hba1 PE=1 SV=1
Length = 399
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 75 SFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNII 114
+F G S P K SG + +HQL D+ II
Sbjct: 230 AFENQKGSAGETKSEPKEADKGSGDSTKSTMHQLSDSEII 269
>sp|C9S0R2|BGAL_GEOSY Beta-galactosidase BgaB OS=Geobacillus sp. (strain Y412MC61)
GN=bgaB PE=3 SV=1
Length = 672
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 27 GKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRG-GLGVGSF 76
G+ + TW DI++ + LA + DW Y ++ R Y +G G+ VG++
Sbjct: 528 GEYDCTTWADIIRLEGAEPLATFKGDW-YAGLPAVTRNCYGKGEGIYVGTY 577
>sp|P19668|BGAL_GEOKU Beta-galactosidase bgaB OS=Geobacillus kaustophilus GN=bgaB PE=1
SV=1
Length = 672
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 27 GKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRG-GLGVGSF 76
G+ + TW DI++ + LA + DW Y ++ R Y +G G+ VG++
Sbjct: 528 GEYDCTTWADIIRLEGAEPLATFKGDW-YAGLPAVTRNCYGKGEGIYVGTY 577
>sp|Q67JT4|RPOC_SYMTH DNA-directed RNA polymerase subunit beta' OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=rpoC PE=3 SV=1
Length = 1179
Score = 29.3 bits (64), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 12 PHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWY 54
PHE + AY ++G +EL W +I K+L PY +W+
Sbjct: 518 PHEALLAY-----QNGLVELHDWVEIRFPEPPKDLEPYSEEWW 555
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,639,201
Number of Sequences: 539616
Number of extensions: 2440505
Number of successful extensions: 7662
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 7613
Number of HSP's gapped (non-prelim): 51
length of query: 147
length of database: 191,569,459
effective HSP length: 106
effective length of query: 41
effective length of database: 134,370,163
effective search space: 5509176683
effective search space used: 5509176683
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)