BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032137
MANAIALLSCNTVVLAAQQRPQRRAKKLKKPNTKQNNKNSTSTSSSVGFGIEKMEPLWRC
VQGCGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPERPY
FCRVEPAVFLSLYGINKKKFNKEACK

High Scoring Gene Products

Symbol, full name Information P value
AT5G02710 protein from Arabidopsis thaliana 6.3e-37
PFL_5154
Uncharacterized protein
protein from Pseudomonas protegens Pf-5 2.1e-06
CPS_2552
Putative uncharacterized protein
protein from Colwellia psychrerythraea 34H 0.00013
CPS_2552
conserved hypothetical protein
protein from Colwellia psychrerythraea 34H 0.00013
CJE0604
Putative uncharacterized protein
protein from Campylobacter jejuni RM1221 0.00014
CJE_0604
conserved hypothetical protein
protein from Campylobacter jejuni RM1221 0.00014
PFL_6040
Uncharacterized protein
protein from Pseudomonas protegens Pf-5 0.00027
PSPTO_1114
Uncharacterized protein
protein from Pseudomonas syringae pv. tomato str. DC3000 0.00057

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032137
        (146 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2151321 - symbol:AT5G02710 "AT5G02710" species...   397  6.3e-37   1
UNIPROTKB|Q4K6A0 - symbol:PFL_5154 "Uncharacterized prote...   109  2.1e-06   1
UNIPROTKB|Q481K2 - symbol:CPS_2552 "Putative uncharacteri...    92  0.00013   1
TIGR_CMR|CPS_2552 - symbol:CPS_2552 "conserved hypothetic...    92  0.00013   1
UNIPROTKB|Q5HVR5 - symbol:CJE0604 "Putative uncharacteriz...    77  0.00014   2
TIGR_CMR|CJE_0604 - symbol:CJE_0604 "conserved hypothetic...    77  0.00014   2
UNIPROTKB|Q4K3T5 - symbol:PFL_6040 "Uncharacterized prote...    89  0.00027   1
UNIPROTKB|Q888B6 - symbol:PSPTO_1114 "Uncharacterized pro...    86  0.00057   1


>TAIR|locus:2151321 [details] [associations]
            symbol:AT5G02710 "AT5G02710" species:3702 "Arabidopsis
            thaliana" [GO:0010027 "thylakoid membrane organization"
            evidence=RCA] [GO:0016556 "mRNA modification" evidence=RCA]
            EMBL:CP002688 EMBL:AL162973 KO:K06940 InterPro:IPR005358
            Pfam:PF03692 UniGene:At.33376 EMBL:AY054553 EMBL:BT006564
            EMBL:AK220584 IPI:IPI00529618 PIR:T48292 RefSeq:NP_195891.1
            STRING:Q9LZ14 PRIDE:Q9LZ14 EnsemblPlants:AT5G02710.1 GeneID:831827
            KEGG:ath:AT5G02710 TAIR:At5g02710 HOGENOM:HOG000232855
            InParanoid:Q9LZ14 OMA:CGACCRL PhylomeDB:Q9LZ14
            ProtClustDB:CLSN2687355 Genevestigator:Q9LZ14 Uniprot:Q9LZ14
        Length = 176

 Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
 Identities = 70/98 (71%), Positives = 81/98 (82%)

Query:    48 GF-GIEKMEPLWRCVQGCGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINYE 106
             GF G    E  W+CV+GCGACCK+ K   FATP+EIFD+P DVELYRS+IG DGWC+NY+
Sbjct:    46 GFSGGTTKELTWKCVEGCGACCKIAKDFSFATPDEIFDNPDDVELYRSMIGDDGWCLNYD 105

Query:   107 KSTRKCSIYPERPYFCRVEPAVFLSLYGINKKKFNKEA 144
             K+TRKCSIY +RPYFCRVEP VF SLYGI +KKFNKEA
Sbjct:   106 KATRKCSIYADRPYFCRVEPEVFKSLYGIEEKKFNKEA 143


>UNIPROTKB|Q4K6A0 [details] [associations]
            symbol:PFL_5154 "Uncharacterized protein" species:220664
            "Pseudomonas protegens Pf-5" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] EMBL:CP000076
            GenomeReviews:CP000076_GR InterPro:IPR005358 Pfam:PF03692
            eggNOG:NOG41930 HOGENOM:HOG000271270 OMA:NCQACCC RefSeq:YP_262233.1
            STRING:Q4K6A0 DNASU:3479558 GeneID:3479558 KEGG:pfl:PFL_5154
            PATRIC:19879771 ProtClustDB:CLSK2309521
            BioCyc:PFLU220664:GIX8-5195-MONOMER Uniprot:Q4K6A0
        Length = 102

 Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 26/72 (36%), Positives = 33/72 (45%)

Query:    55 EPLWRCVQGCGACCKLDKG--PDFATPEEIFD-DPSDVELYRSLIGPDGWCINYEKSTRK 111
             EP   C      CC+L+     D   PE   D D    E+ R L   DGWC   ++ + +
Sbjct:    12 EPAVSCSTCAACCCQLEVMLITDTGVPERFIDTDDWGGEVMRRL--DDGWCAALDRDSMR 69

Query:   112 CSIYPERPYFCR 123
             CSIY  RP  CR
Sbjct:    70 CSIYELRPLICR 81


>UNIPROTKB|Q481K2 [details] [associations]
            symbol:CPS_2552 "Putative uncharacterized protein"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP000083 GenomeReviews:CP000083_GR InterPro:IPR005358
            Pfam:PF03692 RefSeq:YP_269267.1 STRING:Q481K2 DNASU:3521349
            GeneID:3521349 KEGG:cps:CPS_2552 PATRIC:21468165 eggNOG:NOG41930
            HOGENOM:HOG000271270 OMA:NCQACCC ProtClustDB:CLSK2309612
            BioCyc:CPSY167879:GI48-2615-MONOMER Uniprot:Q481K2
        Length = 96

 Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 23/66 (34%), Positives = 31/66 (46%)

Query:    62 QGCGACCKLDKG--PDFATPEE-IFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPER 118
             Q C  CC L+     D   P+  ++ D    E    L   DGWC   ++ T  CSIY  R
Sbjct:    19 QAC--CCSLEVMLLTDTGVPDRHVYVDEYGKETM--LRFDDGWCSALDRDTLMCSIYENR 74

Query:   119 PYFCRV 124
             P+ CR+
Sbjct:    75 PWVCRI 80


>TIGR_CMR|CPS_2552 [details] [associations]
            symbol:CPS_2552 "conserved hypothetical protein"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP000083 GenomeReviews:CP000083_GR InterPro:IPR005358
            Pfam:PF03692 RefSeq:YP_269267.1 STRING:Q481K2 DNASU:3521349
            GeneID:3521349 KEGG:cps:CPS_2552 PATRIC:21468165 eggNOG:NOG41930
            HOGENOM:HOG000271270 OMA:NCQACCC ProtClustDB:CLSK2309612
            BioCyc:CPSY167879:GI48-2615-MONOMER Uniprot:Q481K2
        Length = 96

 Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 23/66 (34%), Positives = 31/66 (46%)

Query:    62 QGCGACCKLDKG--PDFATPEE-IFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIYPER 118
             Q C  CC L+     D   P+  ++ D    E    L   DGWC   ++ T  CSIY  R
Sbjct:    19 QAC--CCSLEVMLLTDTGVPDRHVYVDEYGKETM--LRFDDGWCSALDRDTLMCSIYENR 74

Query:   119 PYFCRV 124
             P+ CR+
Sbjct:    75 PWVCRI 80


>UNIPROTKB|Q5HVR5 [details] [associations]
            symbol:CJE0604 "Putative uncharacterized protein"
            species:195099 "Campylobacter jejuni RM1221" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG0727 KO:K06940
            InterPro:IPR005358 Pfam:PF03692 PIR:C81395 RefSeq:YP_178620.1
            STRING:Q5HVR5 GeneID:3232073 KEGG:cjr:CJE0604 PATRIC:20042922
            HOGENOM:HOG000222837 OMA:CCVGESG ProtClustDB:CLSK872317
            BioCyc:CJEJ195099:GJC0-619-MONOMER Uniprot:Q5HVR5
        Length = 124

 Score = 77 (32.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 18/46 (39%), Positives = 25/46 (54%)

Query:    99 DGW-CINYEKSTRKCSIYPERPYFCRVEPAVFLSLYGINKKKFNKE 143
             DG+ CI ++   R CSIY  RP  CR  P  F   +  ++K+  KE
Sbjct:    73 DGFACIFFDTQKRNCSIYDFRPKQCRTFP--FWEYFKTHQKELEKE 116

 Score = 45 (20.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query:    60 CVQGCGACCKLDKGPDFATPEEI 82
             C +  G CC  + G  FA+ EE+
Sbjct:    16 CEKCGGKCCTGESGNIFASKEEL 38


>TIGR_CMR|CJE_0604 [details] [associations]
            symbol:CJE_0604 "conserved hypothetical protein"
            species:195099 "Campylobacter jejuni RM1221" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG0727 KO:K06940
            InterPro:IPR005358 Pfam:PF03692 PIR:C81395 RefSeq:YP_178620.1
            STRING:Q5HVR5 GeneID:3232073 KEGG:cjr:CJE0604 PATRIC:20042922
            HOGENOM:HOG000222837 OMA:CCVGESG ProtClustDB:CLSK872317
            BioCyc:CJEJ195099:GJC0-619-MONOMER Uniprot:Q5HVR5
        Length = 124

 Score = 77 (32.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 18/46 (39%), Positives = 25/46 (54%)

Query:    99 DGW-CINYEKSTRKCSIYPERPYFCRVEPAVFLSLYGINKKKFNKE 143
             DG+ CI ++   R CSIY  RP  CR  P  F   +  ++K+  KE
Sbjct:    73 DGFACIFFDTQKRNCSIYDFRPKQCRTFP--FWEYFKTHQKELEKE 116

 Score = 45 (20.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query:    60 CVQGCGACCKLDKGPDFATPEEI 82
             C +  G CC  + G  FA+ EE+
Sbjct:    16 CEKCGGKCCTGESGNIFASKEEL 38


>UNIPROTKB|Q4K3T5 [details] [associations]
            symbol:PFL_6040 "Uncharacterized protein" species:220664
            "Pseudomonas protegens Pf-5" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP000076 eggNOG:COG0727 KO:K06940 InterPro:IPR005358
            Pfam:PF03692 HOGENOM:HOG000247399 ProtClustDB:CLSK868136
            InterPro:IPR016928 PIRSF:PIRSF029611 RefSeq:YP_263098.2
            GeneID:3480411 KEGG:pfl:PFL_6040 PATRIC:19881611
            BioCyc:PFLU220664:GIX8-6084-MONOMER Uniprot:Q4K3T5
        Length = 117

 Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
 Identities = 21/69 (30%), Positives = 31/69 (44%)

Query:    56 PLWRCVQGCGACCKLDKGPDFATPEEIFDDPSDVELYRSLIGPDGWCINYEKSTRKCSIY 115
             P + CV GC  CC    GP   +PEE+   P      +     +  C++       C++Y
Sbjct:    16 PSFECVPGCHDCC----GPVTTSPEEMSRLPRKTAAEQEAAMDELNCVHL--GPNGCTVY 69

Query:   116 PERPYFCRV 124
              ERP  CR+
Sbjct:    70 DERPLICRL 78


>UNIPROTKB|Q888B6 [details] [associations]
            symbol:PSPTO_1114 "Uncharacterized protein" species:223283
            "Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:AE016853 GenomeReviews:AE016853_GR InterPro:IPR005358
            Pfam:PF03692 eggNOG:NOG41930 HOGENOM:HOG000271270
            RefSeq:NP_790948.1 GeneID:1182750 KEGG:pst:PSPTO_1114
            PATRIC:19993445 OMA:EAGAEDC ProtClustDB:CLSK912655
            BioCyc:PSYR223283:GJIX-1137-MONOMER Uniprot:Q888B6
        Length = 74

 Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
 Identities = 19/50 (38%), Positives = 25/50 (50%)

Query:    75 DFATPEEIFD-DPSDVELYRSLIGPDGWCINYEKSTRKCSIYPERPYFCR 123
             D   PE   D D    E+   L   DGWC   +++T  C+IY +RP  CR
Sbjct:     6 DTGVPERYIDTDEWGGEVMLRL--DDGWCAALDRNTMMCTIYEKRPLICR 53


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.140   0.460    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      146       125   0.00091  102 3  11 22  0.50    30
                                                     29  0.39    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  580 (62 KB)
  Total size of DFA:  144 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.66u 0.11s 12.77t   Elapsed:  00:00:00
  Total cpu time:  12.66u 0.11s 12.77t   Elapsed:  00:00:00
  Start:  Fri May 10 17:15:42 2013   End:  Fri May 10 17:15:42 2013

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