BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032139
(146 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49637|R27A3_ARATH 60S ribosomal protein L27a-3 OS=Arabidopsis thaliana GN=RPL27AC
PE=2 SV=2
Length = 146
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 132/146 (90%), Positives = 142/146 (97%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPG+FGKVGMRY
Sbjct: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPV 120
FHKLRNKF CPIVN+DKLWS+VP+DVKAK++KDNVP+IDVTQ G+FKVLGKG LPEN+P
Sbjct: 61 FHKLRNKFFCPIVNLDKLWSLVPEDVKAKSTKDNVPLIDVTQHGFFKVLGKGHLPENKPF 120
Query: 121 VVKAKLVSKTAEKKIKEAGGAVVLTA 146
VVKAKL+SKTAEKKIKEAGGAVVLTA
Sbjct: 121 VVKAKLISKTAEKKIKEAGGAVVLTA 146
>sp|Q9LR33|R27A2_ARATH 60S ribosomal protein L27a-2 OS=Arabidopsis thaliana GN=RPL27AB
PE=2 SV=1
Length = 146
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 130/146 (89%), Positives = 139/146 (95%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
M T KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPG+FGKVGMRY
Sbjct: 1 MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPV 120
FHKLRNKF CPIVN+DKLWS+VP+DVKAK+SKDNVP+IDVTQ G+FKVLGKG LPEN+P
Sbjct: 61 FHKLRNKFFCPIVNLDKLWSLVPEDVKAKSSKDNVPLIDVTQHGFFKVLGKGHLPENKPF 120
Query: 121 VVKAKLVSKTAEKKIKEAGGAVVLTA 146
VVKAKL+SKTAEKKIKEAGGAVVLTA
Sbjct: 121 VVKAKLISKTAEKKIKEAGGAVVLTA 146
>sp|P48160|RL27A_DICDI 60S ribosomal protein L27a OS=Dictyostelium discoideum GN=rpl27a
PE=3 SV=1
Length = 148
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 93/149 (62%), Positives = 119/149 (79%), Gaps = 4/149 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
M TRF K+RK RG V AG+GR+GKHRKHPGGRGNAGG+ HHRI FDKYHPG+FGK+GMR+
Sbjct: 1 MPTRFSKHRKSRGDVCAGYGRVGKHRKHPGGRGNAGGLTHHRINFDKYHPGYFGKLGMRH 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPEN 117
FH LRN++HCP V+++K+W++VP+ V+ + N P++DVTQ G+FKVLG G+LP
Sbjct: 61 FHLLRNQYHCPTVSLEKIWTLVPESVRKSLAAKNDGTAPVVDVTQKGFFKVLGHGILP-T 119
Query: 118 QPVVVKAKLVSKTAEKKIKEAGGAVVLTA 146
QP++VKA+ SK AEKKIK GGA +L A
Sbjct: 120 QPIIVKARYFSKVAEKKIKAVGGACILVA 148
>sp|Q56K03|RL27A_BOVIN 60S ribosomal protein L27a OS=Bos taurus GN=RPL27A PE=2 SV=3
Length = 148
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/149 (65%), Positives = 117/149 (78%), Gaps = 4/149 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
M +R +K RK RGHVS GHGRIGKHRKHPGGRGNAGGMHHHRI FDKYHPG+FGKVGMR+
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRH 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNV---PMIDVTQFGYFKVLGKGVLPEN 117
+H RN+ CP VN+DKLW++V + + A+K+ P+IDV + GY+KVLGKG LP+
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK- 119
Query: 118 QPVVVKAKLVSKTAEKKIKEAGGAVVLTA 146
QPV+VKAK S+ AE+KIK GGA VL A
Sbjct: 120 QPVIVKAKFFSRRAEEKIKGVGGACVLVA 148
>sp|P14115|RL27A_MOUSE 60S ribosomal protein L27a OS=Mus musculus GN=Rpl27a PE=2 SV=5
Length = 148
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/149 (65%), Positives = 117/149 (78%), Gaps = 4/149 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
M +R +K RK RGHVS GHGRIGKHRKHPGGRGNAGGMHHHRI FDKYHPG+FGKVGMR+
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRH 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNV---PMIDVTQFGYFKVLGKGVLPEN 117
+H RN+ CP VN+DKLW++V + + A+K+ P+IDV + GY+KVLGKG LP+
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGVAPIIDVVRSGYYKVLGKGKLPK- 119
Query: 118 QPVVVKAKLVSKTAEKKIKEAGGAVVLTA 146
QPV+VKAK S+ AE+KIK GGA VL A
Sbjct: 120 QPVIVKAKFFSRRAEEKIKGVGGACVLVA 148
>sp|P18445|RL27A_RAT 60S ribosomal protein L27a OS=Rattus norvegicus GN=Rpl27a PE=1 SV=3
Length = 148
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/149 (65%), Positives = 117/149 (78%), Gaps = 4/149 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
M +R +K RK RGHVS GHGRIGKHRKHPGGRGNAGGMHHHRI FDKYHPG+FGKVGMR+
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRH 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPEN 117
+H RN+ CP VN+DKLW++V + + A+K+ P+IDV + GY+KVLGKG LP+
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKNGVAPIIDVVRSGYYKVLGKGKLPK- 119
Query: 118 QPVVVKAKLVSKTAEKKIKEAGGAVVLTA 146
QPV+VKAK S+ AE+KIK GGA VL A
Sbjct: 120 QPVIVKAKFFSRRAEEKIKGVGGACVLVA 148
>sp|Q4R723|RL27A_MACFA 60S ribosomal protein L27a OS=Macaca fascicularis GN=RPL27A PE=2
SV=1
Length = 148
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 96/149 (64%), Positives = 117/149 (78%), Gaps = 4/149 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
M +R +K RK RGHVS GHGRIGKHRKHPGGRGNAGG+HHHRI FDKYHPG+FGKVGMR+
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMRH 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNV---PMIDVTQFGYFKVLGKGVLPEN 117
+H RN+ CP VN+DKLW++V + + A+K+ P+IDV + GY+KVLGKG LP+
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK- 119
Query: 118 QPVVVKAKLVSKTAEKKIKEAGGAVVLTA 146
QPV+VKAK S+ AE+KIK GGA VL A
Sbjct: 120 QPVIVKAKFFSRRAEEKIKGVGGACVLVA 148
>sp|O01358|RL27A_OSCBR 60S ribosomal protein L27a OS=Oscheius brevesophaga GN=rpl-27a PE=3
SV=1
Length = 145
Score = 195 bits (496), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 94/146 (64%), Positives = 112/146 (76%), Gaps = 1/146 (0%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
M +K RK RGHVS GHGRIGKHRKHPGGRGNAGG HHHRI DKYHPG+FGKVGMR
Sbjct: 1 MAHSLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINRDKYHPGYFGKVGMRV 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPV 120
FH +N +CP VN+D+LW++VP++ K K S + P+ID + GYFKVLGKG+LP+ QP+
Sbjct: 61 FHLNKNHHYCPTVNVDRLWALVPEEQKTKVSAEKAPVIDCVKAGYFKVLGKGLLPK-QPL 119
Query: 121 VVKAKLVSKTAEKKIKEAGGAVVLTA 146
+VKAK S AE KIK AGGA +L A
Sbjct: 120 IVKAKFFSHEAENKIKAAGGACILVA 145
>sp|Q5REY2|RL27A_PONAB 60S ribosomal protein L27a OS=Pongo abelii GN=RPL27A PE=2 SV=3
Length = 148
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 95/149 (63%), Positives = 117/149 (78%), Gaps = 4/149 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
M +R +K RK RGHVS GHGRIGKHRKHPGGRGNAGG+HHHRI FDKYHPG+FGKVGM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNV---PMIDVTQFGYFKVLGKGVLPEN 117
+H RN+ CP VN+DKLW++V + + A+K+ P+IDV + GY+KVLGKG LP+
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK- 119
Query: 118 QPVVVKAKLVSKTAEKKIKEAGGAVVLTA 146
QPV+VKAK S+ AE+KIK GGA VL A
Sbjct: 120 QPVIVKAKFFSRRAEEKIKSVGGACVLVA 148
>sp|P46776|RL27A_HUMAN 60S ribosomal protein L27a OS=Homo sapiens GN=RPL27A PE=1 SV=2
Length = 148
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 95/149 (63%), Positives = 117/149 (78%), Gaps = 4/149 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
M +R +K RK RGHVS GHGRIGKHRKHPGGRGNAGG+HHHRI FDKYHPG+FGKVGM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNV---PMIDVTQFGYFKVLGKGVLPEN 117
+H RN+ CP VN+DKLW++V + + A+K+ P+IDV + GY+KVLGKG LP+
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK- 119
Query: 118 QPVVVKAKLVSKTAEKKIKEAGGAVVLTA 146
QPV+VKAK S+ AE+KIK GGA VL A
Sbjct: 120 QPVIVKAKFFSRRAEEKIKSVGGACVLVA 148
>sp|Q5R1X0|RL27A_PANTR 60S ribosomal protein L27a OS=Pan troglodytes GN=RPL27A PE=2 SV=3
Length = 148
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/149 (63%), Positives = 116/149 (77%), Gaps = 4/149 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
M +R +K RK RGHVS GHGRIGKHRKHPGGRGNAGG+HHHRI FDKYHPG+FGKVGM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNV---PMIDVTQFGYFKVLGKGVLPEN 117
+H RN+ CP VN+DKLW++V + + A+K+ P+IDV + GY+KVLGKG LP+
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK- 119
Query: 118 QPVVVKAKLVSKTAEKKIKEAGGAVVLTA 146
QPV+VKAK S+ AE+KIK GGA VL
Sbjct: 120 QPVIVKAKFFSRRAEEKIKSVGGACVLVG 148
>sp|P47830|RL27A_XENLA 60S ribosomal protein L27a OS=Xenopus laevis GN=rpl27a PE=2 SV=2
Length = 148
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 93/149 (62%), Positives = 114/149 (76%), Gaps = 4/149 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
M ++ +K RK RGHVS GHGRIGKHRKHPGGRGNAGGMHHHRI FDKYHPG+FGKVGMR+
Sbjct: 1 MPSKLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRH 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVK---AKASKDNVPMIDVTQFGYFKVLGKGVLPEN 117
+H +N+ CP +N+DKLW++V + + AK + P+ID GY+KVLGKG LP+
Sbjct: 61 YHLKKNQSFCPTINLDKLWTLVSEQTRLNHAKNLEGPAPIIDAVHAGYYKVLGKGKLPK- 119
Query: 118 QPVVVKAKLVSKTAEKKIKEAGGAVVLTA 146
QPV+VKAK S+ AE+KIK GGA VL A
Sbjct: 120 QPVIVKAKFFSRKAEEKIKSVGGACVLGA 148
>sp|P02406|RL28_YEAST 60S ribosomal protein L28 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL28 PE=1 SV=3
Length = 149
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/150 (62%), Positives = 114/150 (76%), Gaps = 5/150 (3%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
M +RF K RK RGHVSAG GRIGKHRKHPGGRG AGG HHHRI DKYHPG+FGKVGMRY
Sbjct: 1 MPSRFTKTRKHRGHVSAGKGRIGKHRKHPGGRGMAGGQHHHRINMDKYHPGYFGKVGMRY 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKAK----ASKDNVPMIDVTQFGYFKVLGKGVLPE 116
FHK + F P++N+DKLW+++P+D + + ASK+ P+ID GY K+LGKG +P
Sbjct: 61 FHKQQAHFWKPVLNLDKLWTLIPEDKRDQYLKSASKETAPVIDTLAAGYGKILGKGRIP- 119
Query: 117 NQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 146
N PV+VKA+ VSK AE+KI+ AGG V L A
Sbjct: 120 NVPVIVKARFVSKLAEEKIRAAGGVVELIA 149
>sp|P08978|RL28_NEUCR 60S ribosomal protein L28 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rpl-28
PE=2 SV=1
Length = 149
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/150 (61%), Positives = 112/150 (74%), Gaps = 5/150 (3%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
M TRF K RK RGHVSAG GR+GKHRKHPGGRG AGG HHHR DKYHPG+FGKVGMR+
Sbjct: 1 MPTRFSKTRKHRGHVSAGKGRVGKHRKHPGGRGMAGGQHHHRTNLDKYHPGYFGKVGMRH 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKAK----ASKDNVPMIDVTQFGYFKVLGKGVLPE 116
FH LRN PI+NI+KLW++VP + + K A+ + P+ID+ GY K+LGKG LP+
Sbjct: 61 FHLLRNHQWAPILNIEKLWTLVPAEAREKYVSGAATETAPVIDLLSHGYAKLLGKGRLPQ 120
Query: 117 NQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 146
P+VV+A+ VS AE+KIKEAGG + L A
Sbjct: 121 -VPIVVRARYVSAEAERKIKEAGGVIELVA 149
>sp|P78987|RL27A_ERYGR 60S ribosomal protein L27a OS=Erysiphe graminis subsp. hordei PE=2
SV=1
Length = 149
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 89/150 (59%), Positives = 110/150 (73%), Gaps = 5/150 (3%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
M T K RK RGHVSAGHGR+GKHRKHPGGRG AGG HHHR DKYHPG+FGKVGMRY
Sbjct: 1 MPTHLSKTRKHRGHVSAGHGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHPGYFGKVGMRY 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVK----AKASKDNVPMIDVTQFGYFKVLGKGVLPE 116
FHK N F P++N++KLWS++P + + + + D +P+ID+ GY KVLGKG +P+
Sbjct: 61 FHKQGNHFWKPVLNLEKLWSLIPAEKREAYLSSTNPDVIPVIDLLPLGYSKVLGKGRIPK 120
Query: 117 NQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 146
P+VV+A+ SK AE+KI EAGG V L A
Sbjct: 121 -VPLVVRARWFSKEAERKITEAGGVVELVA 149
>sp|P41092|RL27A_DROME 60S ribosomal protein L27a OS=Drosophila melanogaster GN=RpL27A
PE=2 SV=2
Length = 149
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/144 (63%), Positives = 110/144 (76%), Gaps = 4/144 (2%)
Query: 6 KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRYFHKLR 65
KK RK RGHVS GHGRIGKHRKHPGGRGNAGGMHHHRI FDKYHPG+FGKVGMR FH R
Sbjct: 7 KKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLRR 66
Query: 66 NKFHCPIVNIDKLWSMVPQDVKAKASKD---NVPMIDVTQFGYFKVLGKGVLPENQPVVV 122
P +N+DKLWS+V + A+ K+ P+ID+ +FGY+K+LG+G LP +PV+V
Sbjct: 67 QHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPA-RPVIV 125
Query: 123 KAKLVSKTAEKKIKEAGGAVVLTA 146
KAK SK AE KIK+AGG +L+A
Sbjct: 126 KAKYFSKKAEDKIKKAGGVCLLSA 149
>sp|P48161|RL27A_EUPCR 60S ribosomal protein L27a OS=Euplotes crassus GN=RPL27A PE=3 SV=1
Length = 148
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/148 (60%), Positives = 111/148 (75%), Gaps = 3/148 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
MT + RK RGHVS GHGR+GKHRKHPGGRG AG HHHRI KYHPG GK GMR+
Sbjct: 1 MTHSKRNTRKLRGHVSHGHGRVGKHRKHPGGRGMAGPEHHHRINVFKYHPGHIGKHGMRH 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKD--NVPMIDVTQFGYFKVLGKGVLPENQ 118
FH +RN+++CP +N+ KLWS+V ++ + KA D V +IDV + GY+KVLGKG+LPE
Sbjct: 61 FHLMRNQYYCPSINLSKLWSLVTEEERQKAQTDKSKVILIDVVKHGYYKVLGKGLLPE-V 119
Query: 119 PVVVKAKLVSKTAEKKIKEAGGAVVLTA 146
P+VVKAKL + TAEK+IK+ GGA VL A
Sbjct: 120 PLVVKAKLFTPTAEKRIKQVGGACVLRA 147
>sp|P36585|RL28A_SCHPO 60S ribosomal protein L28-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl28a PE=3 SV=3
Length = 148
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/149 (59%), Positives = 108/149 (72%), Gaps = 4/149 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
M T K RK RGHVSAGHGRIGKHRKHPGGRG AGG+ H R FDKYHPG+FGKVGMR
Sbjct: 1 MPTHVSKTRKLRGHVSAGHGRIGKHRKHPGGRGKAGGLQHLRSHFDKYHPGYFGKVGMRR 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNV---PMIDVTQFGYFKVLGKGVLPEN 117
FH ++N P VN+D+LW+++P + + K N P+I+V Q GY KVLGKG LPE
Sbjct: 61 FHLMKNPLWRPTVNLDRLWTLLPNEARDKYLGKNTEVAPVINVLQSGYGKVLGKGRLPET 120
Query: 118 QPVVVKAKLVSKTAEKKIKEAGGAVVLTA 146
PV+V+ + VS+ AE+KIK+AGG V L A
Sbjct: 121 -PVIVQTRYVSRRAEEKIKQAGGVVELIA 148
>sp|P57728|RL28B_SCHPO 60S ribosomal protein L28-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl28b PE=1 SV=1
Length = 148
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/149 (59%), Positives = 108/149 (72%), Gaps = 4/149 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
M T K RK RGHVSAGHGRIGKHRKHPGGRG AGG+ H R FDKYHPG+FGKVGMR
Sbjct: 1 MPTHTSKTRKLRGHVSAGHGRIGKHRKHPGGRGKAGGLQHLRSHFDKYHPGYFGKVGMRR 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNV---PMIDVTQFGYFKVLGKGVLPEN 117
FH ++N P VN+D+LW++VP + + K N P+I+V Q GY KVLGKG LP+
Sbjct: 61 FHLMKNPLWRPTVNLDRLWTLVPNETREKYLGKNTEVAPVINVLQSGYGKVLGKGRLPDT 120
Query: 118 QPVVVKAKLVSKTAEKKIKEAGGAVVLTA 146
PV+++ + VS+ AE+KIK+AGG V L A
Sbjct: 121 -PVIIQTRYVSRRAEEKIKQAGGVVELIA 148
>sp|Q00454|RL27A_TETTH 60S ribosomal protein L27a OS=Tetrahymena thermophila GN=RPL27A
PE=1 SV=1
Length = 149
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/150 (60%), Positives = 109/150 (72%), Gaps = 5/150 (3%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGG--MHHHRILFDKYHPGFFGKVGM 58
M + KK RK RGHVS GHGR+GKHRK G MHHHRIL +K+HPG++GK+GM
Sbjct: 1 MVSHLKKTRKLRGHVSHGHGRVGKHRKGGCRGGRGKAGGMHHHRILMEKWHPGYYGKLGM 60
Query: 59 RYFHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKD--NVPMIDVTQFGYFKVLGKGVLPE 116
R FH +N HCP+VNIDKLWS+V + K ++D VP+IDVT+ G+FKVLGKG LP
Sbjct: 61 RTFHLKKNPLHCPVVNIDKLWSLVSDATRQKYAEDKKKVPVIDVTKAGFFKVLGKGRLP- 119
Query: 117 NQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 146
NQPVVVKAK SKTAE++I GGA VLTA
Sbjct: 120 NQPVVVKAKYFSKTAERRIVAVGGACVLTA 149
>sp|Q27021|RL27A_TENMO 60S ribosomal protein L27a OS=Tenebrio molitor GN=RpL27A PE=2 SV=1
Length = 148
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/149 (55%), Positives = 103/149 (69%), Gaps = 4/149 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
M+T KK RK RGHVS GHGRIGKHRKHPGGRGNAGGMHHHRI FDKYHPG+FGK+GMR
Sbjct: 1 MSTHKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKLGMRN 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKAKAS---KDNVPMIDVTQFGYFKVLGKGVLPEN 117
+H RN P +N+DKLW++V + ++K + P+ID+ + GY+K+LGKG N
Sbjct: 61 YHLRRNSKWAPAINLDKLWTLVSEQTRSKYQNHPEGKAPVIDIVKAGYYKLLGKGACLTN 120
Query: 118 QPVVVKAKLVSKTAEKKIKEAGGAVVLTA 146
++K E KIK GGA VL+A
Sbjct: 121 LS-LLKPSFSLNRLEDKIKAVGGACVLSA 148
>sp|Q9BH80|R27A2_ENTHI 60S ribosomal protein L27a-2/4 OS=Entamoeba histolytica GN=rpl27a-2
PE=3 SV=1
Length = 149
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 78/138 (56%), Positives = 100/138 (72%), Gaps = 5/138 (3%)
Query: 13 GHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRYFHKLRNKFHCPI 72
GHVS G+GRIGKHRK GGRGNAGG HH + F +HP +FGK GMR FH NK++CP
Sbjct: 13 GHVSMGYGRIGKHRKQRGGRGNAGGQHHRKTWFTTFHPDYFGKHGMRVFHLKANKYYCPS 72
Query: 73 VNIDKLWSMVPQDVKAKASK----DNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVS 128
+N+D LWS+V +DV+A+ + VP+ID + GYFKVLGKG LP+ QPV+V+A+ S
Sbjct: 73 INVDSLWSLVGKDVQAQYKNAKVGEEVPVIDCVKHGYFKVLGKGFLPK-QPVIVRARYFS 131
Query: 129 KTAEKKIKEAGGAVVLTA 146
+ A++KIK GGA LTA
Sbjct: 132 EKAQQKIKAVGGACELTA 149
>sp|O15883|RL27A_TRYBB 60S ribosomal protein L27a OS=Trypanosoma brucei brucei GN=RPL27A
PE=2 SV=1
Length = 145
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/147 (56%), Positives = 103/147 (70%), Gaps = 3/147 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
M TRFKK R +RG G+GR+GKHRKHP GRGNAGG HHHRI F KYHPG+FGK GM +
Sbjct: 1 MPTRFKKTRHQRGSTFCGYGRVGKHRKHPSGRGNAGGEHHHRINFRKYHPGYFGKCGMNH 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNV-PMIDVTQFGYFKVLGKGVLPENQP 119
+HK +N P +N+D L ++ +D KA K V P+ID+ GY K+LG G L P
Sbjct: 61 YHKKKNTTWKPTINLDNLTKLMAKDEAMKAKKGEVLPVIDLLANGYSKLLGNGHL--QAP 118
Query: 120 VVVKAKLVSKTAEKKIKEAGGAVVLTA 146
+VKA+ VSK A+KKI++AGGAVVL A
Sbjct: 119 CIVKARWVSKLADKKIRKAGGAVVLQA 145
>sp|Q9BI06|R27A1_ENTHI 60S ribosomal protein L27a-1 OS=Entamoeba histolytica GN=rpl27a-1
PE=3 SV=1
Length = 149
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/138 (55%), Positives = 100/138 (72%), Gaps = 5/138 (3%)
Query: 13 GHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRYFHKLRNKFHCPI 72
GHVS G+GRIGKHRK GGRGNAGG HH + F +HP +FGK GMR FH NK++CP
Sbjct: 13 GHVSMGYGRIGKHRKQRGGRGNAGGQHHRKTWFTTFHPDYFGKHGMRVFHLKANKYYCPS 72
Query: 73 VNIDKLWSMVPQDVKAKASK----DNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVS 128
+N+D LWS+V +D++A+ + VP+ID + GYFKVLGKG LP+ QPV+V+A+ S
Sbjct: 73 INVDSLWSLVGKDIQAQYKNAKVGEEVPVIDCVKHGYFKVLGKGFLPK-QPVIVRARYFS 131
Query: 129 KTAEKKIKEAGGAVVLTA 146
+ A++KIK GGA LTA
Sbjct: 132 EKAQQKIKAVGGACELTA 149
>sp|Q9BI14|R27A3_ENTHI 60S ribosomal protein L27a-3 OS=Entamoeba histolytica GN=rpl27a-3
PE=3 SV=1
Length = 149
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/138 (55%), Positives = 100/138 (72%), Gaps = 5/138 (3%)
Query: 13 GHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRYFHKLRNKFHCPI 72
GHVS G+GRIGKHRK GGRGNAGG HH + F +HP +FGK GMR FH NK++CP
Sbjct: 13 GHVSMGYGRIGKHRKQRGGRGNAGGQHHRKTWFTTFHPDYFGKHGMRVFHLKANKYYCPS 72
Query: 73 VNIDKLWSMVPQDVKAK----ASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVS 128
+N+D LWS+V +DV+ + + + VP+ID + GYFKVLGKG LP+ QPV+V+A+ S
Sbjct: 73 INVDSLWSLVGKDVQEQYKNAKTGEEVPVIDCVKHGYFKVLGKGFLPK-QPVIVRARYFS 131
Query: 129 KTAEKKIKEAGGAVVLTA 146
+ A++KIK GGA LTA
Sbjct: 132 EKAQQKIKAVGGACELTA 149
>sp|Q9LPV3|R27A1_ARATH Putative 60S ribosomal protein L27a-1 OS=Arabidopsis thaliana
GN=RPL27AA PE=5 SV=1
Length = 104
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/145 (56%), Positives = 85/145 (58%), Gaps = 45/145 (31%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
MTT KK R R HVS GHGR GKHRK PG RGNAG VGMRY
Sbjct: 1 MTTSRKKTRNLREHVSVGHGRFGKHRKLPGSRGNAG-------------------VGMRY 41
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPV 120
FHKLRNKF+C IVN+DKLWSMV LGKG LPEN+PV
Sbjct: 42 FHKLRNKFYCQIVNLDKLWSMV--------------------------LGKGFLPENKPV 75
Query: 121 VVKAKLVSKTAEKKIKEAGGAVVLT 145
VVKAKLVS T EKKIKEAG AVVLT
Sbjct: 76 VVKAKLVSNTDEKKIKEAGSAVVLT 100
>sp|O62581|RL27A_ENCCU 60S ribosomal protein L27a OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL27A PE=3 SV=1
Length = 147
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 97/147 (65%), Gaps = 3/147 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRY 60
MT R KK RK RGHVS G+GR+GKHRKH GGRG AGG H + F ++HP + GK GMR
Sbjct: 1 MTDRVKKTRKLRGHVSHGYGRVGKHRKHSGGRGLAGGFSHMKTFFTRFHPDYHGKRGMRV 60
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKAK--ASKDNVPMIDVTQFGYFKVLGKGVLPENQ 118
+H+ N + ++ +LW M+P++ + + + VP+IDV +FGY V+G G L +
Sbjct: 61 YHRKENSDYARPISSARLWGMIPKEQRYDFLDNPEKVPVIDVREFGYHVVVG-GKLSLER 119
Query: 119 PVVVKAKLVSKTAEKKIKEAGGAVVLT 145
P+VVKA+ + +A+++I + GG ++T
Sbjct: 120 PIVVKARYFTPSAKEEITKVGGKWIIT 146
>sp|Q29333|RL27A_PIG 60S ribosomal protein L27a (Fragment) OS=Sus scrofa GN=RPL27A
PE=3 SV=3
Length = 54
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 46/54 (85%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGFFG 54
M +R + RK RGHVS GHGRIGKHRKHPGGRGNAGGMHHHRI FDKYH G+FG
Sbjct: 1 MPSRLRXTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHXGYFG 54
>sp|A6UWW0|RL15_META3 50S ribosomal protein L15P OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rpl15p PE=3 SV=1
Length = 143
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRK--HPGGRGNAGGMHHHRILFDKYHPGFFGKVGM 58
M + KK K RG + G+G KHR H GG+G AG H I KY P GK G
Sbjct: 1 MIRKSKKITKLRGSRTCGYGAAKKHRGAGHKGGKGLAGVTKHRWIHTVKYMPDHIGKYGF 60
Query: 59 RYFHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQ 118
+ L + ++N+ +L +V ++ ++ D +ID+T Y KVLGKG +
Sbjct: 61 KRHSSLIKEL--KVINLGQLDEIVSKNKESFEIVDGKIVIDITTLDYEKVLGKGKI--TC 116
Query: 119 PVVVKAKLVSKTAEKKIKEAGGAVV 143
P+++KA S++A++KI+ AGG V
Sbjct: 117 PMIIKAVEFSESAKEKIESAGGEFV 141
>sp|P54047|RL15_METJA 50S ribosomal protein L15P OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rpl15p PE=3 SV=1
Length = 143
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 71/134 (52%), Gaps = 6/134 (4%)
Query: 12 RGHVSAGHGRIGKHRK--HPGGRGNAGGMHHHRILFDKYHPGFFGKVGMRYFHKLRNKFH 69
RG + G G K R + GGRG AGG H KY P +FGK G + L +
Sbjct: 12 RGSRTCGGGSHKKRRGAGNKGGRGMAGGHKHKWTWIIKYCPDYFGKYGFKRHPSLVKRLE 71
Query: 70 CPIVNIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSK 129
+N+ +L +V ++ +D+ ++DV + GY KVLGKG + P++VKA VS+
Sbjct: 72 T--INVGELEEIVLKNPDKFEKEDDKFVVDVIELGYEKVLGKGKV--TIPMIVKAVEVSE 127
Query: 130 TAEKKIKEAGGAVV 143
A +KI+ GG VV
Sbjct: 128 KAREKIEAVGGEVV 141
>sp|B8D5U8|RL15_DESK1 50S ribosomal protein L15P OS=Desulfurococcus kamchatkensis (strain
1221n / DSM 18924) GN=rpl15p PE=3 SV=1
Length = 155
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 8/143 (5%)
Query: 6 KKNRKKRGHV-SAGHGRIGKHRKHPGGRGNAG--GMHHHR-ILFDKYHPGFFGKVGMRYF 61
KK+RK +G + G GR+G+HRK G RG G G H H+ I K+ P ++GK G R
Sbjct: 7 KKSRKLQGRTRTMGWGRVGQHRK-SGSRGGFGAVGFHKHKYIWIIKHAPNWYGKHGFRPR 65
Query: 62 HKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVV 121
++ + +D+L + + KA +D + +++ + G+ KVLG G + V+
Sbjct: 66 SRIHENVTINVGELDELAWRLASNGKA-IIEDGLIVLNTVEMGFDKVLGSGKVTRGLKVI 124
Query: 122 VKAKLVSKTAEKKIKEAGGAVVL 144
A+ +++ A++KI+EAGG V+L
Sbjct: 125 --AREITEEAKRKIEEAGGKVIL 145
>sp|O05643|RL15_SULAC 50S ribosomal protein L15P OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=rpl15p PE=3 SV=1
Length = 144
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 76/143 (53%), Gaps = 9/143 (6%)
Query: 6 KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFD-KYHPGFFGKVGMRY-FHK 63
KK+RK RG+ + G G G+HR G GMH + + K+ G++GK G R K
Sbjct: 7 KKSRKYRGYRTHGWGTKGQHRDRGAQGGRQIGMHKEKWSWTVKFGEGWYGKHGFRNPTSK 66
Query: 64 LRNKFHCPIVNIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVK 123
L N + + KL + D ++ ++D+ ++GY K+LG G L P+V+K
Sbjct: 67 LVN-----AIGLRKLQEYIDNDKIKIEEENGKKVVDLAKYGYDKLLGGGNL--RLPLVIK 119
Query: 124 AKLVSKTAEKKIKEAGGAVVLTA 146
++ A++++KE GG ++LT+
Sbjct: 120 VAKATEKAKERVKEIGGEIILTS 142
>sp|O26133|RL15_METTH 50S ribosomal protein L15P OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl15p PE=3 SV=1
Length = 146
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 34 NAGGMHHHRILFDKYHPGFFGKVGMRYFHKLRNKFHCPIVNIDKLWSMVPQDVK--AKAS 91
AGG HH KY P FGK G + KL + VN+ L M+P+ ++ +
Sbjct: 36 QAGGHKHHWTWIVKYDPKHFGKYGFKRPQKLIKRLET--VNLAYLDEMIPELLERGVASE 93
Query: 92 KDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGG 140
+D + ++DV G+ KVLG G + +PV +KA S++A +KI+EAGG
Sbjct: 94 EDGMVVLDVRDLGFEKVLGSGRI--TRPVHLKAYEFSRSATEKIEEAGG 140
>sp|A5UL66|RL15_METS3 50S ribosomal protein L15P OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rpl15p PE=3 SV=1
Length = 145
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 74/147 (50%), Gaps = 8/147 (5%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRK--HPGGRGNAGGMHHHRILFDKYHPGFFGKVGM 58
M +K K RG S G G K R + GGRGNAG H K+ P +GK G
Sbjct: 1 MIRSKRKINKLRGSRSNGGGCTKKRRGAGNKGGRGNAGASKQHWTWTAKFDPDHYGKHGF 60
Query: 59 RYFHKLRNKFHCPIVNIDKLWSMVPQDVKA-KASKD-NVPMIDVTQFGYFKVLGKGVLPE 116
+ K+ K + VN+ L +++ KASKD + +IDVT+ GY KVL KG +
Sbjct: 61 KRPQKMIKKVNP--VNLSYLEEQADNLIESGKASKDGDSIVIDVTELGYDKVLAKGKI-- 116
Query: 117 NQPVVVKAKLVSKTAEKKIKEAGGAVV 143
+ ++ A S +A +KI+E GG +
Sbjct: 117 TKSFIISAPQFSASAIEKIEEMGGEAI 143
>sp|Q9YF98|RL15_AERPE 50S ribosomal protein L15P OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl15p
PE=3 SV=1
Length = 158
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 20 GRIGKHRKH--PGGRGNAGGMHHHRILFDKYHPGFFGKVGMRYFHKLRNKFHCPIVNIDK 77
GRIG+HRK GG G AG H KY P ++GK G ++R +N+ +
Sbjct: 22 GRIGQHRKSGSKGGYGAAGLGKHEWTWTIKYAPTWYGKKGFNP-PRIRAGLEVTTINVGQ 80
Query: 78 LWSMVPQ-DVKAKASK-DNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKI 135
L + + + KA K D ++++ + G K+LG+G + +P+ V L S+ A KKI
Sbjct: 81 LDEIAALLEAQGKAEKEDGKIVVNLEKLGIHKLLGEGRVA--RPLKVITPLASELAIKKI 138
Query: 136 KEAGGAVVLT 145
+EAGG V++T
Sbjct: 139 EEAGGEVIVT 148
>sp|A1RWR4|RL15_THEPD 50S ribosomal protein L15P OS=Thermofilum pendens (strain Hrk 5)
GN=rpl15p PE=3 SV=1
Length = 151
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 78/144 (54%), Gaps = 10/144 (6%)
Query: 4 RFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAG--GMHHHRILFD-KYHPGFFGKVGMRY 60
R KK+R RG + G GR+G+HRK G RG G G H H+ + KY P ++GK G
Sbjct: 3 REKKSRAYRGSRTHGWGRVGQHRK-SGSRGGRGLVGYHKHKWSWTVKYAPDWYGKHGFTR 61
Query: 61 FHKLRNKFHCPIVNIDKLWSMVPQDV-KAKASKD-NVPMIDVTQFGYFKVLGKGVLPENQ 118
L ++ +N+ +L + V + K AS++ + ++D+TQ G+ K+ G G +
Sbjct: 62 HPSLVVEYRT--INVGQLDAEVEEFFRKGLASREGDAYVVDLTQLGFNKLTGSGQV--RN 117
Query: 119 PVVVKAKLVSKTAEKKIKEAGGAV 142
++VK + +K A KI+ GG V
Sbjct: 118 KIIVKVPVATKRAISKIEAQGGRV 141
>sp|Q9UX85|RL15_SULSO 50S ribosomal protein L15P OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rpl15p PE=3 SV=1
Length = 144
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 4 RFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRI-LFDKYHPGFFGKVGMRYFH 62
R KK+RK RG + G G G+HR G GMH + KY G++GK G F
Sbjct: 5 REKKSRKMRGSRTMGWGIRGQHRDRGSQGGRQIGMHKEKWSWLVKYGKGWYGKHG---FR 61
Query: 63 KLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVV 122
K I ++ KL ++ D ++D+ + GY K+LG G + + PV +
Sbjct: 62 NPTTKLTSAI-SLRKLNELLESGYIKIKEMDGKKIVDLNELGYNKLLGGGSI--SIPVTI 118
Query: 123 KAKLVSKTAEKKIKEAGGAVVLT 145
K + A +K+KE GG V+L+
Sbjct: 119 KVGKATNKAIQKVKEMGGEVILS 141
>sp|A3DNC9|RL15_STAMF 50S ribosomal protein L15P OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rpl15p PE=3 SV=1
Length = 152
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 10/134 (7%)
Query: 16 SAGHGRIGKHRKHPGGRGNAG--GMHHHR-ILFDKYHPGFFGKVGM-RYFHKLRNKFHCP 71
S G GRIG+HRK G RG G G H H+ I KY P ++GK G R + +
Sbjct: 18 SMGWGRIGQHRK-SGARGGFGAVGFHKHKWIWVLKYAPNWYGKHGFTRPPETIYGVYSIN 76
Query: 72 IVNIDKLWS-MVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKT 130
+ +D+L +V +++ + ++ +IDVT G+ KVLG+G + P+ + K +SK
Sbjct: 77 VGELDELAKHLVSKNLAYR--EEGKIVIDVTSMGFNKVLGRGKV--TLPLKIITKSISKR 132
Query: 131 AEKKIKEAGGAVVL 144
A +KI GG VV+
Sbjct: 133 AREKITAVGGEVVV 146
>sp|Q2NFX9|RL15_METST 50S ribosomal protein L15P OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rpl15p PE=3 SV=1
Length = 145
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 74/147 (50%), Gaps = 14/147 (9%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRG--NAGGMHHHRILFDKYHPGFFGKVGM 58
M + KK RK+RG S G G K R G AGG HH P FGK G
Sbjct: 1 MIRKTKKIRKQRGSRSVGGGCTKKRRGAGHRGGRGQAGGNKHHWTWMVINDPKHFGKYGF 60
Query: 59 RYFHKLRNKF---HCPIV--NIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGV 113
+ K +F + ++ NI+KL + ++ K +D ++DVTQ GY KVLGKG
Sbjct: 61 KRPQKTIQQFKPINLSVIDNNIEKL---LADEIAVK--EDGQIVLDVTQLGYNKVLGKGS 115
Query: 114 LPENQPVVVKAKLVSKTAEKKIKEAGG 140
L + + +KA S++A KI++AGG
Sbjct: 116 L--STAITIKAPKFSQSAISKIEDAGG 140
>sp|A6VH07|RL15_METM7 50S ribosomal protein L15P OS=Methanococcus maripaludis (strain C7
/ ATCC BAA-1331) GN=rpl15p PE=3 SV=1
Length = 143
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRG--NAGGMHHHRILFDKYHPGFFGKVGM 58
M + KK K RG + G+G KHR G NAG H + K++P +FGK G
Sbjct: 1 MIRKSKKITKMRGSRTCGYGEAKKHRGAGHRGGRGNAGHQKHKWLSVCKFNPDYFGKYGF 60
Query: 59 RYFHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQ 118
L + +NI +L + + A +D ++D T+ GY KVLGKG + +
Sbjct: 61 NRNPGLIKQLE--TINIGELEEYILKYKDAFQVEDGKVVVDATEIGYEKVLGKGRI--ST 116
Query: 119 PVVVKAKLVSKTAEKKIKEAGGAVV 143
+VVKA S+ A++KI+ AGG V
Sbjct: 117 AMVVKAVEFSEGAKEKIEAAGGEFV 141
>sp|A4FVT7|RL15_METM5 50S ribosomal protein L15P OS=Methanococcus maripaludis (strain C5
/ ATCC BAA-1333) GN=rpl15p PE=3 SV=1
Length = 143
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 74/150 (49%), Gaps = 16/150 (10%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRG--NAGGMHHHRILFDKYHPGFFGKVGM 58
M + KK K RG + G+G KHR G NAG H + K++P +FGK G
Sbjct: 1 MIRKSKKITKMRGSRTCGYGEAKKHRGAGHRGGRGNAGHQKHKWLSVCKFNPDYFGKYGF 60
Query: 59 RYFHKLRNKFHCPI-----VNIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGV 113
N+ C I +NI +L + + A +D ++D T GY KVLGKG
Sbjct: 61 -------NRNPCLIKQLETINIGELEEYILKYKDAFQVEDGKVVVDATTIGYEKVLGKGR 113
Query: 114 LPENQPVVVKAKLVSKTAEKKIKEAGGAVV 143
+ + +VVKA S+ A++KI+ AGG V
Sbjct: 114 I--STAMVVKAVEFSEGAKEKIEAAGGEFV 141
>sp|A6UQ66|RL15_METVS 50S ribosomal protein L15P OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rpl15p PE=3 SV=1
Length = 143
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRG--NAGGMHHHRILFDKYHPGFFGKVGM 58
M + KK K+RG + G+G KHR G NAG H + K++P +FGK G
Sbjct: 1 MIRKSKKITKQRGSRTCGYGEAKKHRGAGHRGGRGNAGHQKHKWLSVCKFNPEYFGKYGF 60
Query: 59 RYFHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQ 118
L K +N+ +L V + A KD +++ T+ G+ K+LGKG + +
Sbjct: 61 NRNPCLIKKLE--TINVGELEEYVLKYKDAFKLKDGKVVVNATEIGFEKILGKGRI--ST 116
Query: 119 PVVVKAKLVSKTAEKKIKEAGGAVV 143
+VVKA S+ A++KI+ AGG V
Sbjct: 117 AMVVKAVEFSEGAKEKIEAAGGEFV 141
>sp|P14032|RL15_METVA 50S ribosomal protein L15P OS=Methanococcus vannielii GN=rpl15p
PE=3 SV=1
Length = 143
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRG--NAGGMHHHRILFDKYHPGFFGKVGM 58
M + KK K+RG + G+G KHR G NAG H + K++P +FGK G
Sbjct: 1 MIRKSKKITKQRGSRTCGYGEAKKHRGAGHRGGRGNAGHQKHKWLSVCKFNPEYFGKYGF 60
Query: 59 RYFHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQ 118
L K +N+ +L V + A KD +++ T+ G+ K+LGKG + +
Sbjct: 61 NRNPCLIKKLE--TINVGELEEYVLKYKDAFKLKDGKVVVNATEIGFEKILGKGRI--ST 116
Query: 119 PVVVKAKLVSKTAEKKIKEAGGAVV 143
+VVKA S+ A++KI+ AGG V
Sbjct: 117 AMVVKAVEFSEGAKEKIEAAGGEFV 141
>sp|A9A9P2|RL15_METM6 50S ribosomal protein L15P OS=Methanococcus maripaludis (strain C6
/ ATCC BAA-1332) GN=rpl15p PE=3 SV=1
Length = 143
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRG--NAGGMHHHRILFDKYHPGFFGKVGM 58
M + KK K RG + G+G KHR G NAG H + K++P +FGK G
Sbjct: 1 MIRKSKKITKMRGSRTCGYGEAKKHRGAGHRGGRGNAGHQKHKWLSVCKFNPDYFGKYGF 60
Query: 59 RYFHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQ 118
L + +NI +L + + A +D ++D T+ G+ KVLGKG + +
Sbjct: 61 NRNPGLIKQLE--TINIGELEEYILKYKDAFQVEDGKVVVDATEIGFEKVLGKGRI--ST 116
Query: 119 PVVVKAKLVSKTAEKKIKEAGGAVV 143
+VVKA S+ A++KI+ AGG V
Sbjct: 117 AMVVKAVEFSEGAKEKIEAAGGEFV 141
>sp|Q6LXD1|RL15_METMP 50S ribosomal protein L15P OS=Methanococcus maripaludis (strain S2
/ LL) GN=rpl15p PE=3 SV=1
Length = 143
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 16/150 (10%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRG--NAGGMHHHRILFDKYHPGFFGKVGM 58
M + KK KKRG + G+G KHR G NAG H + K++P +FGK G
Sbjct: 1 MIRKSKKITKKRGSRTCGYGEAKKHRGAGHRGGRGNAGHQKHKWLSVCKFNPDYFGKYGF 60
Query: 59 RYFHKLRNKFHCPI-----VNIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGV 113
N+ C I +NI +L + + A ++ +++ T+ G+ KVLGKG
Sbjct: 61 -------NRNPCLIKQLETINIGELEEYILKYKDAFQVEEGKVVVNATEIGFEKVLGKGR 113
Query: 114 LPENQPVVVKAKLVSKTAEKKIKEAGGAVV 143
+ + +VVKA S+ A++KI+ AGG V
Sbjct: 114 I--STAMVVKAVEFSEGAKEKIEAAGGEFV 141
>sp|A2BME1|RL15_HYPBU 50S ribosomal protein L15P OS=Hyperthermus butylicus (strain DSM
5456 / JCM 9403) GN=rpl15p PE=3 SV=1
Length = 151
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 11/147 (7%)
Query: 4 RFKKNRKKRGHV-SAGHGRIGKHRKHPGGRGN-AGGMHHHRILFD-KYHPGFFGKVGMRY 60
R KK+R RG + G GRIG+HR G A GMH H + KY P +FGK G
Sbjct: 5 RRKKSRHLRGRTRTMGWGRIGQHRGSGSRGGFGAAGMHKHMWTWVVKYAPTWFGKHG--- 61
Query: 61 FHKLR-NKFHCPIVNIDKLWSMVPQDVKAKASK--DNVPMIDVTQFGYFKVLGKGVLPEN 117
F++ + + +N+ +L + ++ +K + ++++ + GY K+LG+G +
Sbjct: 62 FNRPQIYELKASEINVGELAEKLDAWLREGVAKQEEGKIVVNLAELGYAKLLGRGKI--T 119
Query: 118 QPVVVKAKLVSKTAEKKIKEAGGAVVL 144
+PV V ++ A KKI+EAGG VV+
Sbjct: 120 RPVKVIVPAATERAVKKIEEAGGEVVI 146
>sp|A1RT57|RL15_PYRIL 50S ribosomal protein L15P OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=rpl15p PE=3 SV=1
Length = 156
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 16/153 (10%)
Query: 1 MTTRFKKNRK-KRGHVSAGHGRIGKHRKH--PGGRGNAGGMHHHRILFDKYHPG-----F 52
M RFK K +RG + G GR+G+HRK GG+G G H L KY F
Sbjct: 1 MVRRFKPAVKYRRGSRTHGWGRVGQHRKSGSSGGKGMVGFHKHKWSLVMKYGESGTGWPF 60
Query: 53 FGKVGMRYFHKLRNKFHCPIVNIDKLWSMVPQDVKAK---ASKDNVPMIDVTQFGYFKVL 109
+GK G + + ++ +N+ L S + +++K + A + +I + + GY K+L
Sbjct: 61 YGKHGFKQPPTIAIEWRP--INVGSL-SDIIKELKKEGKIAEEGGKYVIRLLELGYNKLL 117
Query: 110 GKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAV 142
G G + + PV+V S+TA +KI++AGG V
Sbjct: 118 GGGHI--DVPVIVYTPAASRTAVEKIEKAGGEV 148
>sp|P47831|RL28_CANAX 60S ribosomal protein L28 (Fragment) OS=Candida albicans GN=RPL28
PE=3 SV=1
Length = 62
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 88 AKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKK 134
+K+S P+ID GY KVLGKG LPE PV+VKA+ VSK AE+K
Sbjct: 8 SKSSASAAPVIDTLAHGYGKVLGKGRLPE-VPVIVKARFVSKLAEEK 53
>sp|Q8ZT50|RL15_PYRAE 50S ribosomal protein L15P OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rpl15p PE=3 SV=1
Length = 156
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 16/153 (10%)
Query: 1 MTTRFKKNRK-KRGHVSAGHGRIGKHRKHPGGRGNAG-GMHHHRI-LFDKYHPG-----F 52
M RFK+ K +RG + G GR+G+HRK G G G H H+ L KY F
Sbjct: 1 MVRRFKRGTKYRRGSRTHGWGRVGQHRKSGGSGGKGMVGFHKHKWSLVMKYGESGTGWPF 60
Query: 53 FGKVGMRYFHKLRNKFHCPIVNIDKLWSMVPQDVKAKA---SKDNVPMIDVTQFGYFKVL 109
+GK G + + ++ +N+ L +V +++KA+ + +I++ + G+ K+L
Sbjct: 61 YGKHGFKQPPPISIEWRP--INVGTLAELV-KELKAEGKVREEGGKYVINLLELGFNKLL 117
Query: 110 GKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAV 142
G G + + PV+V + S+TA +KI++AGG V
Sbjct: 118 GGGTI--DLPVIVYTPIASRTAVEKIEKAGGEV 148
>sp|A4WM07|RL15_PYRAR 50S ribosomal protein L15P OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=rpl15p PE=3 SV=1
Length = 155
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 84/157 (53%), Gaps = 16/157 (10%)
Query: 1 MTTRFKKNRK-KRGHVSAGHGRIGKHRKHPGGRGNAG-GMHHHRI-LFDKYHPG-----F 52
M RFK+ K +RG + G GR+G+HRK G G G H H+ L KY F
Sbjct: 1 MVRRFKRAVKYRRGSRTHGWGRVGQHRKSGGSGGKGMVGFHKHKWSLVMKYGESGTGWPF 60
Query: 53 FGKVGMRYFHKLRNKFHCPIVNIDKLWSMVPQDVKAKA---SKDNVPMIDVTQFGYFKVL 109
+GK G + + ++ PI N+ L + V +++K++ + ++++ + GY K+L
Sbjct: 61 YGKHGFKQPPTITVEWR-PI-NVGTL-AEVVRELKSEGKIREEGGKYVVNLLELGYNKLL 117
Query: 110 GKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 146
G G + + PV+V + SKTA +KI+ AGG V + A
Sbjct: 118 GGGSI--DVPVIVYTPVASKTAVEKIQRAGGEVRVVA 152
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,671,984
Number of Sequences: 539616
Number of extensions: 2750790
Number of successful extensions: 6956
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 154
Number of HSP's that attempted gapping in prelim test: 6744
Number of HSP's gapped (non-prelim): 234
length of query: 146
length of database: 191,569,459
effective HSP length: 106
effective length of query: 40
effective length of database: 134,370,163
effective search space: 5374806520
effective search space used: 5374806520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)