Citrus Sinensis ID: 032146

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140------
Protein Sequence
MSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccEEcEEEEEcccHHHHHHHHHHccccEEccEEcccccccEEEEEEcccEEEEEEEccccccccccccccccccEEEEEEccHHHHHHHHHHcccEEEEccccccEEEEEcccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccEEEcccccccccccccccEEEEEEEEEccHHHHHHHHHHHHccEEEHccHHHcccccHccccccccEEEEEcccccccccccccHccccccEEEEEccHHHHHHHHHHcccEEEEEccccEEEEEcccccccEEEEEEcc
Coil and Loop (DISEMBL)
msveggilkkepirdsdkidygvVSVHHVGILCENLERSLEFYQNILGLeinearphdklpyrgaWLWVGAEMIhlmelpnpdplsgrpehggrdrhtciaIRDVSKLKMILDKAGisytlsksgrpaiftrdpdanaleftqvdg
Flexible Loop (DISEMBL)
msveggilkkepirdsdkiDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIsytlsksgrpaiftrdpdanaleftqvdg
Low Complexity Region (SEG)
MSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Disordered region (IsUnstruct)
****************DKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL*****************HTCIAIRDVSKLKMILDKAGISYTLS************************
Disordered Region (DISOPRED)
************************SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD*
Disordered Region (DISEMBL)
MSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS********DRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Disordered Region (DISPRO)
*****GILKK**IRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	146	2.2.26 [Sep-21-2011]
P45871	128	Uncharacterized protein Y	yes	no	0.787	0.898	0.305	3e-07
Q96PE7	176	Methylmalonyl-CoA epimera	yes	no	0.705	0.585	0.304	3e-05
Q9D1I5	178	Methylmalonyl-CoA epimera	yes	no	0.760	0.623	0.256	0.0003

>sp|P45871|YWKD_BACSU Uncharacterized protein YwkD OS=Bacillus subtilis (strain 168) GN=ywkD PE=4 SV=1

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 6/121 (4%)

Query: 25  SVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 83
           S+HH+ I+C + E+S  FY + LG + I E    ++  Y+      G+ +I L   P+P 
Sbjct: 5   SIHHIAIICSDYEKSKAFYVHKLGFQVIQETYREERGSYKLDLSLNGSYVIELFSFPDPP 64

Query: 84  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY----TLSKSGRPAIFTRDPDANAL 139
               RPE  G  RH    +  + K    L + GI      T   +G+   F  DPD   L
Sbjct: 65  ERQTRPEAAGL-RHLAFTVGSLDKAVQELHEKGIETEPIRTDPLTGKRFTFFFDPDQLPL 123

Query: 140 E 140
           E
Sbjct: 124 E 124

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|Q96PE7|MCEE_HUMAN Methylmalonyl-CoA epimerase, mitochondrial OS=Homo sapiens GN=MCEE PE=1 SV=1

 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 22/125 (17%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHL----MELPN 81
           ++HV I   +LE++  FY+NILG +++EA P   LP  G    V    ++L    MEL +
Sbjct: 48  LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHG----VSVVFVNLGNTKMELLH 100

Query: 82  P----DPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIF 130
           P     P++G  +    G   H CI + +++   M L K  I        +   G+P IF
Sbjct: 101 PLGRDSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIF 160

Query: 131 TRDPD 135
               D
Sbjct: 161 LHPKD 165

Homo sapiens (taxid: 9606)

EC: 5

EC: .

EC: 1

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|Q9D1I5|MCEE_MOUSE Methylmalonyl-CoA epimerase, mitochondrial OS=Mus musculus GN=Mcee PE=2 SV=1

 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 14/125 (11%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRG---AWLWVGAEMIHLME-LPN 81
           ++HV +   +LE++  FY+++LG +++E  P   LP  G    ++ +G   + L+  L +
Sbjct: 50  LNHVAVAVPDLEKASSFYRDVLGAQVSEVVP---LPEHGVSVVFVNLGNTKMELLHPLGS 106

Query: 82  PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIFTRDP 134
             P++G  +    G   H CI + ++S   M L K  I        +   G+P IF    
Sbjct: 107 DSPITGFLQKNKAGGMHHVCIEVDNISAAVMDLKKKKIRSLSDEAKIGAHGKPVIFLHPK 166

Query: 135 DANAL 139
           D   +
Sbjct: 167 DCGGV 171

Mus musculus (taxid: 10090)

EC: 5

EC: .

EC: 1

EC: .

EC: 9

EC: 9

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
388493084	200	unknown [Lotus japonicus]	0.993	0.725	0.841	3e-68
359807103	206	uncharacterized protein LOC100805881 [Gl	0.993	0.703	0.827	9e-68
15242020	197	Lactoylglutathione lyase / glyoxalase I	0.883	0.654	0.906	3e-66
297796591	196	lactoylglutathione lyase family protein	0.952	0.709	0.863	3e-66
356547897	209	PREDICTED: uncharacterized protein LOC10	0.986	0.688	0.820	1e-65
449489903	206	PREDICTED: uncharacterized LOC101203815	0.938	0.665	0.875	1e-65
449452528	175	PREDICTED: uncharacterized protein LOC10	0.938	0.782	0.875	1e-65
226495911	193	glyoxalase/bleomycin resistance protein/	0.883	0.668	0.899	2e-65
297738629	199	unnamed protein product [Vitis vinifera]	1.0	0.733	0.801	3e-65
225444850	205	PREDICTED: uncharacterized protein ywkD-	1.0	0.712	0.801	3e-65

>gi|388493084|gb|AFK34608.1| unknown [Lotus japonicus]

 Score =  262 bits (670), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 122/145 (84%), Positives = 135/145 (93%)

Query: 1   MSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL 60
           ++VEG +L KE    ++  DYGVVS+HHVGILCENLER L+FYQN+LGLEINEARPHDKL
Sbjct: 55  VAVEGDVLDKESEPINEGSDYGVVSIHHVGILCENLERPLDFYQNVLGLEINEARPHDKL 114

Query: 61  PYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT 120
           PYRGAWLWVG+EMIHLMELPNPDPL+GRP+HGGRDRHTCIAIRDVSKLK ILDKAGISYT
Sbjct: 115 PYRGAWLWVGSEMIHLMELPNPDPLTGRPQHGGRDRHTCIAIRDVSKLKAILDKAGISYT 174

Query: 121 LSKSGRPAIFTRDPDANALEFTQVD 145
           LS+SGRPAIFTRDPDANALEFTQ+D
Sbjct: 175 LSRSGRPAIFTRDPDANALEFTQID 199

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807103|ref|NP_001241602.1| uncharacterized protein LOC100805881 [Glycine max] gi|255638057|gb|ACU19343.1| unknown [Glycine max]

 Score =  261 bits (666), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 120/145 (82%), Positives = 133/145 (91%)

Query: 2   SVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP 61
           +VEG +L+KE +  +++ DYGVV +HHVGILCENLERSLEFYQN+LGL+INEARPHDKLP
Sbjct: 62  AVEGDVLEKESVSINEESDYGVVCMHHVGILCENLERSLEFYQNVLGLKINEARPHDKLP 121

Query: 62  YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL 121
           YRGAWLWVG+EMIHLMELPNPDPL+GR +HGGRDRHTCIAIRDVSKLK I DKAGI YTL
Sbjct: 122 YRGAWLWVGSEMIHLMELPNPDPLTGRAQHGGRDRHTCIAIRDVSKLKAIFDKAGIPYTL 181

Query: 122 SKSGRPAIFTRDPDANALEFTQVDG 146
           S SGRPAIF RDPDANALEFTQVDG
Sbjct: 182 SHSGRPAIFARDPDANALEFTQVDG 206

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242020|ref|NP_200514.1| Lactoylglutathione lyase / glyoxalase I family protein [Arabidopsis thaliana] gi|8777444|dbj|BAA97034.1| unnamed protein product [Arabidopsis thaliana] gi|21594695|gb|AAM66034.1| unknown [Arabidopsis thaliana] gi|88193792|gb|ABD42985.1| At5g57040 [Arabidopsis thaliana] gi|110742698|dbj|BAE99260.1| hypothetical protein [Arabidopsis thaliana] gi|332009455|gb|AED96838.1| Lactoylglutathione lyase / glyoxalase I family protein [Arabidopsis thaliana]

 Score =  256 bits (653), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 117/129 (90%), Positives = 124/129 (96%)

Query: 16  SDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIH 75
           ++K DYGVV VHHVG+LCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG+EMIH
Sbjct: 69  NNKTDYGVVGVHHVGLLCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIH 128

Query: 76  LMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPD 135
           LMELPNPDPL+GRPEHGGRDRH CIAIRDVS LK ILDKAGI+YT+SKSGRPAIFTRDPD
Sbjct: 129 LMELPNPDPLTGRPEHGGRDRHACIAIRDVSNLKEILDKAGIAYTMSKSGRPAIFTRDPD 188

Query: 136 ANALEFTQV 144
           ANALEFTQV
Sbjct: 189 ANALEFTQV 197

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796591|ref|XP_002866180.1| lactoylglutathione lyase family protein [Arabidopsis lyrata subsp. lyrata] gi|297312015|gb|EFH42439.1| lactoylglutathione lyase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  255 bits (652), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 120/139 (86%), Positives = 128/139 (92%)

Query: 6   GILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA 65
           GI   E  + ++K DYGVV VHHVG+LCENLERSLEFYQNILGLEINEARPHDKLPYRGA
Sbjct: 58  GISVVEEKQLNNKTDYGVVGVHHVGLLCENLERSLEFYQNILGLEINEARPHDKLPYRGA 117

Query: 66  WLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSG 125
           WLWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRDVS LK ILDKAGI+YT+SKSG
Sbjct: 118 WLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVSNLKEILDKAGIAYTMSKSG 177

Query: 126 RPAIFTRDPDANALEFTQV 144
           RPAIFTRDPDANALEFTQV
Sbjct: 178 RPAIFTRDPDANALEFTQV 196

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547897|ref|XP_003542341.1| PREDICTED: uncharacterized protein LOC100788142 [Glycine max]

 Score =  254 bits (648), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 119/145 (82%), Positives = 134/145 (92%), Gaps = 1/145 (0%)

Query: 2   SVEGGIL-KKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL 60
           +VEG +L  +E I  +++ DYGVV +HHVGILCENLERSL+FYQN+LGL+INEARPH+KL
Sbjct: 64  AVEGDVLLDEESICVNEESDYGVVCMHHVGILCENLERSLDFYQNVLGLKINEARPHNKL 123

Query: 61  PYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT 120
           PYRGAWLWVG+EMIHLMELPNPDPL+GRP+HGGRDRHTCIAIRDVSKLK I DKAGI+YT
Sbjct: 124 PYRGAWLWVGSEMIHLMELPNPDPLTGRPQHGGRDRHTCIAIRDVSKLKAIFDKAGIAYT 183

Query: 121 LSKSGRPAIFTRDPDANALEFTQVD 145
           LS SGRPAIFTRDPDANALEFTQVD
Sbjct: 184 LSHSGRPAIFTRDPDANALEFTQVD 208

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449489903|ref|XP_004158454.1| PREDICTED: uncharacterized LOC101203815 [Cucumis sativus]

 Score =  254 bits (648), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 120/137 (87%), Positives = 125/137 (91%)

Query: 10  KEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV 69
           KEPI    + DYG V VHHVG+LCENLERSL FY NILGL+INEARPHDKLPYRGAWLWV
Sbjct: 70  KEPIEIDVENDYGAVGVHHVGVLCENLERSLHFYLNILGLQINEARPHDKLPYRGAWLWV 129

Query: 70  GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAI 129
           GAEMIHLMELPNPDPL+GRPEHGGRDRHTC+ IRDVSKLK ILDKAGI YTLSKSGRPAI
Sbjct: 130 GAEMIHLMELPNPDPLTGRPEHGGRDRHTCLGIRDVSKLKAILDKAGIPYTLSKSGRPAI 189

Query: 130 FTRDPDANALEFTQVDG 146
           FTRDPDANALEFTQVDG
Sbjct: 190 FTRDPDANALEFTQVDG 206

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452528|ref|XP_004144011.1| PREDICTED: uncharacterized protein LOC101203815 [Cucumis sativus]

 Score =  253 bits (647), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 120/137 (87%), Positives = 125/137 (91%)

Query: 10  KEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV 69
           KEPI    + DYG V VHHVG+LCENLERSL FY NILGL+INEARPHDKLPYRGAWLWV
Sbjct: 39  KEPIEIDVENDYGAVGVHHVGVLCENLERSLHFYLNILGLQINEARPHDKLPYRGAWLWV 98

Query: 70  GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAI 129
           GAEMIHLMELPNPDPL+GRPEHGGRDRHTC+ IRDVSKLK ILDKAGI YTLSKSGRPAI
Sbjct: 99  GAEMIHLMELPNPDPLTGRPEHGGRDRHTCLGIRDVSKLKAILDKAGIPYTLSKSGRPAI 158

Query: 130 FTRDPDANALEFTQVDG 146
           FTRDPDANALEFTQVDG
Sbjct: 159 FTRDPDANALEFTQVDG 175

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226495911|ref|NP_001147026.1| glyoxalase/bleomycin resistance protein/dioxygenase [Zea mays] gi|195606588|gb|ACG25124.1| glyoxalase/bleomycin resistance protein/dioxygenase [Zea mays]

 Score =  253 bits (645), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 116/129 (89%), Positives = 123/129 (95%)

Query: 16  SDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIH 75
           ++K DYGVV VHHVG+LCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG+EMIH
Sbjct: 65  NNKTDYGVVGVHHVGLLCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIH 124

Query: 76  LMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPD 135
           LMELPNPDPL+GRPEHGGRDRH CIAIRDVS LK ILDKAGI+YT+SKSGRPAIFTRDPD
Sbjct: 125 LMELPNPDPLTGRPEHGGRDRHACIAIRDVSVLKEILDKAGIAYTMSKSGRPAIFTRDPD 184

Query: 136 ANALEFTQV 144
            NALEFTQV
Sbjct: 185 TNALEFTQV 193

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738629|emb|CBI27874.3| unnamed protein product [Vitis vinifera]

 Score =  252 bits (644), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 117/146 (80%), Positives = 128/146 (87%)

Query: 1   MSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL 60
           MSVEG ++ KE I    K D G+VS+HHVGILCENLERS +FY N+LG  +NEARP+DKL
Sbjct: 54  MSVEGDVMVKEAISTDQKNDIGIVSLHHVGILCENLERSFDFYHNLLGFPVNEARPNDKL 113

Query: 61  PYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT 120
           PYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRDVSKLK ILD+AGI YT
Sbjct: 114 PYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVSKLKEILDEAGIPYT 173

Query: 121 LSKSGRPAIFTRDPDANALEFTQVDG 146
           LSKSGRPAIFTRDPDANALEF QVD 
Sbjct: 174 LSKSGRPAIFTRDPDANALEFVQVDA 199

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444850|ref|XP_002281014.1| PREDICTED: uncharacterized protein ywkD-like [Vitis vinifera]

 Score =  252 bits (644), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 117/146 (80%), Positives = 128/146 (87%)

Query: 1   MSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL 60
           MSVEG ++ KE I    K D G+VS+HHVGILCENLERS +FY N+LG  +NEARP+DKL
Sbjct: 60  MSVEGDVMVKEAISTDQKNDIGIVSLHHVGILCENLERSFDFYHNLLGFPVNEARPNDKL 119

Query: 61  PYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT 120
           PYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRDVSKLK ILD+AGI YT
Sbjct: 120 PYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVSKLKEILDEAGIPYT 179

Query: 121 LSKSGRPAIFTRDPDANALEFTQVDG 146
           LSKSGRPAIFTRDPDANALEF QVD 
Sbjct: 180 LSKSGRPAIFTRDPDANALEFVQVDA 205

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
TAIR|locus:2164600	197	AT5G57040 "AT5G57040" [Arabido	0.965	0.715	0.833	2.6e-63
TAIR|locus:2016254	167	GLYI7 "AT1G80160" [Arabidopsis	0.828	0.724	0.304	1.9e-12
TAIR|locus:2037728	174	GLYI4 "AT1G15380" [Arabidopsis	0.828	0.695	0.304	1e-11
TIGR_CMR|BA_0607	128	BA_0607 "glyoxylase family pro	0.801	0.914	0.344	1.3e-11
TAIR|locus:2057522	184	GLYI8 "AT2G28420" [Arabidopsis	0.794	0.630	0.296	7.6e-09
UNIPROTKB|Q9KL58	127	VC_A0890 "Glyoxylase I family	0.787	0.905	0.296	1.1e-07
TIGR_CMR|VC_A0890	127	VC_A0890 "glyoxylase I family	0.787	0.905	0.296	1.1e-07
UNIPROTKB|E2REA1	189	MCEE "Uncharacterized protein"	0.753	0.582	0.285	2.3e-07
TIGR_CMR|CPS_2825	128	CPS_2825 "glyoxylase family pr	0.801	0.914	0.284	3.8e-07
UNIPROTKB|Q96PE7	176	MCEE "Methylmalonyl-CoA epimer	0.753	0.625	0.293	6.1e-07

TAIR|locus:2164600 AT5G57040 "AT5G57040" [Arabidopsis thaliana (taxid:3702)]

 Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
 Identities = 120/144 (83%), Positives = 134/144 (93%)

Query:     2 SVEG-GILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL 60
             S+EG  +++++ +  ++K DYGVV VHHVG+LCENLERSLEFYQNILGLEINEARPHDKL
Sbjct:    56 SIEGISVVQEKEL--NNKTDYGVVGVHHVGLLCENLERSLEFYQNILGLEINEARPHDKL 113

Query:    61 PYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT 120
             PYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRDVS LK ILDKAGI+YT
Sbjct:   114 PYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVSNLKEILDKAGIAYT 173

Query:   121 LSKSGRPAIFTRDPDANALEFTQV 144
             +SKSGRPAIFTRDPDANALEFTQV
Sbjct:   174 MSKSGRPAIFTRDPDANALEFTQV 197

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2016254 GLYI7 "AT1G80160" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 39/128 (30%), Positives = 64/128 (50%)

Query:    23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
             + S++H+ +LC ++E S+ FYQN+LG  +   RP D   + GAWL+     IHL++ P P
Sbjct:    11 IKSLNHISLLCRSVEESISFYQNVLGF-LPIRRP-DSFDFDGAWLFGHGIGIHLLQSPEP 68

Query:    83 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT---LSKSGRPA--IFTRDPDAN 137
             + L  + E   +D H       +  ++  L +  I Y    + + G     +F  DPDA 
Sbjct:    69 EKLLKKTEINPKDNHISFQCESMEAVEKKLKEMEIEYVRAVVEEGGIQVDQLFFHDPDAF 128

Query:   138 ALEFTQVD 145
              +E    D
Sbjct:   129 MIEICNCD 136

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009414 "response to water deprivation" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2037728 GLYI4 "AT1G15380" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 39/128 (30%), Positives = 63/128 (49%)

Query:    23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
             + S++HV +LC +++ S+ FYQ +LG  I   RP + L + GAWL+     IHL+  P P
Sbjct:    11 LTSLNHVSVLCRSVDESMNFYQKVLGF-IPIRRP-ESLNFEGAWLFGHGIGIHLLCAPEP 68

Query:    83 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT--LSKSGR---PAIFTRDPDAN 137
             + L  +     +D H       +  ++  L++ GI Y   L + G      +F  DPD  
Sbjct:    69 EKLPKKTAINPKDNHISFQCESMGVVEKKLEEMGIDYVRALVEEGGIQVDQLFFHDPDGF 128

Query:   138 ALEFTQVD 145
              +E    D
Sbjct:   129 MIEICNCD 136

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TIGR_CMR|BA_0607 BA_0607 "glyoxylase family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 43/125 (34%), Positives = 61/125 (48%)

Query:    26 VHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAE-MIHLMELPNPD 83
             VHHV I+C N E S +FY  ILG + INE    ++  Y+   L VG E  I L   PNP 
Sbjct:     6 VHHVAIICSNYEVSKDFYTRILGFKAINEVYRKERDSYK-LDLCVGKEYQIELFSFPNPP 64

Query:    84 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANAL 139
                  PE  G  RH   A+ ++ +    L + G+     +    +G+  +F +DPD   L
Sbjct:    65 KRPSFPEAAGL-RHLAFAVTNIEEAVQDLSQCGVETEAIRIDEITGKKFVFFQDPDGLPL 123

Query:   140 EFTQV 144
             E  +V
Sbjct:   124 ELYEV 128

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

TAIR|locus:2057522 GLYI8 "AT2G28420" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 37/125 (29%), Positives = 61/125 (48%)

Query:    23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
             +++++HV  LC+++++SLEFY  +LG  +   RP     + GAWL+     IHL++  + 
Sbjct:    18 LMALNHVSRLCKDVKKSLEFYTKVLGF-VEIERPAS-FDFDGAWLFNYGVGIHLVQAKDQ 75

Query:    83 DPLSGRPEH-GGRDRHTCIAIRDVSKLKMILDKAGISY---TLSKSGRPAI---FTRDPD 135
             D L    +H    D H      D+  L+  L +  + Y   T+      AI   F  DPD
Sbjct:    76 DKLPSDTDHLDPMDNHISFQCEDMEALEKRLKEVKVKYIKRTVGDEKDAAIDQLFFNDPD 135

Query:   136 ANALE 140
                +E
Sbjct:   136 GFMVE 140

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009845 "seed germination" evidence=RCA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

UNIPROTKB|Q9KL58 VC_A0890 "Glyoxylase I family protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 37/125 (29%), Positives = 52/125 (41%)

Query:    26 VHHVGILCENLERSLEFYQNILGLEI---NEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
             +HH  I+C +  RS  FY  ILGL +   N     D   Y+          I L   P  
Sbjct:     5 IHHAAIICSDYPRSKAFYTEILGLRVLAENYRAARDS--YKLDLALPDGSQIELFSFPKA 62

Query:    83 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANA 138
                   PE  G  RH    + DV+++K  L++ G+S    +    +G+   F  DPD   
Sbjct:    63 PERPSFPEAQGL-RHLAFVVDDVAEIKAQLEQQGVSVEPIRIDEYTGKAYTFFADPDGLP 121

Query:   139 LEFTQ 143
             LE  Q
Sbjct:   122 LELYQ 126

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|VC_A0890 VC_A0890 "glyoxylase I family protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 37/125 (29%), Positives = 52/125 (41%)

Query:    26 VHHVGILCENLERSLEFYQNILGLEI---NEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
             +HH  I+C +  RS  FY  ILGL +   N     D   Y+          I L   P  
Sbjct:     5 IHHAAIICSDYPRSKAFYTEILGLRVLAENYRAARDS--YKLDLALPDGSQIELFSFPKA 62

Query:    83 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANA 138
                   PE  G  RH    + DV+++K  L++ G+S    +    +G+   F  DPD   
Sbjct:    63 PERPSFPEAQGL-RHLAFVVDDVAEIKAQLEQQGVSVEPIRIDEYTGKAYTFFADPDGLP 121

Query:   139 LEFTQ 143
             LE  Q
Sbjct:   122 LELYQ 126

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E2REA1 MCEE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 36/126 (28%), Positives = 62/126 (49%)

Query:    26 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA---WLWVGAEMIHLME-LPN 81
             ++H+ +   +LE++  FY+NILG +I+E  P   LP  G    ++ +G   + L+  L N
Sbjct:    61 LNHIAVAVPDLEKAKAFYKNILGAQISEVVP---LPEHGVSVVFVNLGNTKMELLHPLGN 117

Query:    82 PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS------GRPAIFTRD 133
               P++G  +    G   H CI + D++   M L +  I  +LS+       G+P IF   
Sbjct:   118 DSPIAGFLQKNKAGGMHHICIEVDDINAAVMDLKEKNIR-SLSEETKIGAHGKPVIFLHP 176

Query:   134 PDANAL 139
              D   +
Sbjct:   177 KDCGGI 182

GO:0046491 "L-methylmalonyl-CoA metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0004493 "methylmalonyl-CoA epimerase activity" evidence=IEA

TIGR_CMR|CPS_2825 CPS_2825 "glyoxylase family protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 35/123 (28%), Positives = 53/123 (43%)

Query:    26 VHHVGILCENLERSLEFYQNILGLEI-NEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 84
             +HHV I+C + E+S +FY  ILG +I  E    D+  ++          I L   P+   
Sbjct:     5 IHHVAIICSDYEKSKDFYTRILGFKIIAENYRADRDSFKLDLALADGTQIELFSFPDAPK 64

Query:    85 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGI---SYTLSK-SGRPAIFTRDPDANALE 140
                 PE  G  RH    + +V  +   L   G+   S  + + +G+   F  DPD   LE
Sbjct:    65 RPSFPEAQGL-RHLAFNVENVEAVSQYLTNLGVDVESIRVDEYTGKQFTFFSDPDGLPLE 123

Query:   141 FTQ 143
               Q
Sbjct:   124 LYQ 126

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

UNIPROTKB|Q96PE7 MCEE "Methylmalonyl-CoA epimerase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 37/126 (29%), Positives = 62/126 (49%)

Query:    26 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA---WLWVGAEMIHLME-LPN 81
             ++HV I   +LE++  FY+NILG +++EA P   LP  G    ++ +G   + L+  L  
Sbjct:    48 LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHGVSVVFVNLGNTKMELLHPLGR 104

Query:    82 PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS------GRPAIFTRD 133
               P++G  +    G   H CI + +++   M L K  I  +LS+       G+P IF   
Sbjct:   105 DSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIR-SLSEEVKIGAHGKPVIFLHP 163

Query:   134 PDANAL 139
              D   +
Sbjct:   164 KDCGGV 169

GO:0046491 "L-methylmalonyl-CoA metabolic process" evidence=IDA

GO:0004493 "methylmalonyl-CoA epimerase activity" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0006635 "fatty acid beta-oxidation" evidence=TAS

GO:0019626 "short-chain fatty acid catabolic process" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.13.11.39	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT5G57040	lactoylglutathione lyase family protein / glyoxalase I family protein; lactoylglutathione lyase family protein / glyoxalase I family protein; FUNCTIONS IN- catalytic activity; INVOLVED IN- metabolic process; LOCATED IN- chloroplast; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro-IPR004360); BEST Arabidopsis thaliana protein match is- lactoylglutathione lyase family protein / glyoxalase I family protein (TAIR-AT1G80160.1); Has 744 Blast hits to 744 proteins in 277 species- A [...] (197 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT2G45870	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (410 aa)							•		0.883
	AT1G65230	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (286 aa)				•			•		0.832
	AT2G12280	ligase, putative; ligase, putative; FUNCTIONS IN- formate-tetrahydrofolate ligase activity, lig [...] (90 aa)							•		0.825
	AT2G12200	ligase, putative; ligase, putative; FUNCTIONS IN- formate-tetrahydrofolate ligase activity, lig [...] (63 aa)							•		0.825
	AT2G42750	DNAJ heat shock N-terminal domain-containing protein; DNAJ heat shock N-terminal domain-contain [...] (344 aa)				•			•		0.785
	AT5G03880	electron carrier; electron carrier; FUNCTIONS IN- electron carrier activity; INVOLVED IN- cell [...] (339 aa)				•					0.698
	AT5G37360	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (309 aa)				•					0.690
	MSRB1	MSRB1 (methionine sulfoxide reductase B 1); peptide-methionine-(S)-S-oxide reductase; methionin [...] (202 aa)				•					0.681
	AT1G52870	peroxisomal membrane protein-related; peroxisomal membrane protein-related; FUNCTIONS IN- molec [...] (366 aa)				•					0.677
	AT5G57345	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (188 aa)				•					0.667

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	146
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	2e-34
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	2e-12
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	1e-11
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	2e-11
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	3e-11
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	2e-10
PRK11478	129	PRK11478, PRK11478, putative lyase; Provisional	4e-08
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	9e-08
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	1e-07
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	4e-06
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	1e-05
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	2e-05
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	3e-05
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	6e-04
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	0.002
cd08357	125	cd08357, Glo_EDI_BRP_like_18, This conserved domai	0.003
cd07244	121	cd07244, FosA, FosA, a Fosfomycin resistance prote	0.004
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	0.004

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score =  115 bits (291), Expect = 2e-34
 Identities = 44/120 (36%), Positives = 59/120 (49%), Gaps = 10/120 (8%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDP 84
           + HV +   +LE S  FY ++LGLE     P     + GAWL+ G    +HL+E   PD 
Sbjct: 1   LDHVALRVPDLEASRAFYTDVLGLEEGPRPPF---LFPGAWLYAGDGPQLHLIEEDPPDA 57

Query: 85  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEF 141
           L   PE  GRD H    + D+   +  L  AG+ YT S     G   +F RDPD N +E 
Sbjct: 58  L---PEGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 59.7 bits (145), Expect = 2e-12
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 5/120 (4%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 85
           + HV +   +LE+SL+FY ++LG ++ E     + P R A+   G  ++ L+    P P 
Sbjct: 2   IDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGGRVLELLLNETPPPA 61

Query: 86  SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEF 141
           +              ++ DV      L  AG+           G    + RDPD N +E 
Sbjct: 62  AAGFGGHHI-AFIAFSVDDVDAAYDRLKAAGVEIVREPGRHGWGGRYSYFRDPDGNLIEL 120

Length = 120

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 57.4 bits (139), Expect = 1e-11
 Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 12/118 (10%)

Query: 28  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 87
           HVG+   +LE ++ FY+++LG E+      D      A+L +G   + L E   P     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEV---LERDGGGAEFAFLRLGGTRLELFEGDEP----- 52

Query: 88  RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 141
            P  GG   H    + DV      L  AG+         P      + RDPD N +E 
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGGRVAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 57.3 bits (139), Expect = 2e-11
 Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 14/128 (10%)

Query: 25  SVHHVGILCENLERSLEFYQNILGLEI-NEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 83
            +HHV I+C +  RS EFY  +LGL +  E    ++  Y+      G   I L   PNP 
Sbjct: 3   GIHHVAIICSDYARSKEFYVEVLGLTLIRETYRPERKSYKLDLALNGEYQIELFSFPNPP 62

Query: 84  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS--------YTLSKSGRPAIFTRDPD 135
           P    PE  G  RH   A+ D+      L   G+         +T    G+   F  DPD
Sbjct: 63  PRPSYPEACGL-RHLAFAVEDIEAAVAELKAHGVEVEPIRVDEFT----GKRFTFFYDPD 117

Query: 136 ANALEFTQ 143
              LE  +
Sbjct: 118 GLPLELYE 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 56.5 bits (137), Expect = 3e-11
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 13/116 (11%)

Query: 34  ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGR-PEH 91
           ++LE +  FY+++LGLE        K   R A+ WVG   M+ L +        G  P H
Sbjct: 9   DDLEAAEAFYEDVLGLE-----LMLKEDRRLAFFWVGGRGMLLLFDPGATSTPGGEIPPH 63

Query: 92  GGRDR-HTCIAIR--DVSKLKMILDKAGI---SYTLSKSGRPAIFTRDPDANALEF 141
           GG    H   AI   ++++ +  L+  G+   S      G  +++ RDPD N LE 
Sbjct: 64  GGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLEL 119

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 55.2 bits (132), Expect = 2e-10
 Identities = 31/136 (22%), Positives = 48/136 (35%), Gaps = 18/136 (13%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL------ 79
           +HHV +   +LE S++FY ++LGL + +   ++     G  L          EL      
Sbjct: 3   IHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGF 62

Query: 80  -------PNPDPLSGRPEHGGRDRHTCIAIRD---VSKLKMILDKAGISYTLSKSGRPA- 128
                     D   G P       H    + D          LD  G+   L + GR   
Sbjct: 63  EGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGV 122

Query: 129 -IFTRDPDANALEFTQ 143
            ++ RDPD   +E   
Sbjct: 123 HVYFRDPDGILIELAT 138

Length = 138

>gnl|CDD|183156 PRK11478, PRK11478, putative lyase; Provisional

 Score = 48.7 bits (116), Expect = 4e-08
 Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 6/127 (4%)

Query: 22  GVVSVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMELP 80
           G+  VHH+ I+  +   S  FY +ILG    +E     +  ++G     G  +I L   P
Sbjct: 3   GLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFP 62

Query: 81  NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDA 136
            P     RPE  G  RH   ++ D+      L+   +     +    + +   F  DPD 
Sbjct: 63  FPPERPSRPEACGL-RHLAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDG 121

Query: 137 NALEFTQ 143
             LE  +
Sbjct: 122 LPLELYE 128

Length = 129

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 47.0 bits (112), Expect = 9e-08
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 11/115 (9%)

Query: 31  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 90
           +   +LE +  FY+ +LG E+ E    +   +R   +      I L+ LP PD       
Sbjct: 1   LPVSDLEAARAFYEELLGFEVEE-EDGEYAEFRLGLVLALGGFIELIGLPEPDA------ 53

Query: 91  HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 141
            GG   H    + D+  L   L  AG +        P      + RDPD N +E 
Sbjct: 54  PGGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPWGGREFYVRDPDGNLIEL 108

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 12/127 (9%)

Query: 26  VHHVGILCENLERSLEFYQNILGLE-----INEARPHDKLPYRGAWLWVGAEMIHLMELP 80
           +HHV ++  + + +++FY ++LGL      +N+  P     + G  L     ++   E P
Sbjct: 2   LHHVTLVTRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWP 61

Query: 81  NPDPLSGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYT--LSKSGRPAIFTRDPD 135
           +  P  GR   G    H   ++   + L   +  L  AG+  +  + + G  +++  DPD
Sbjct: 62  DAGP-KGRRGPGQI-HHIAFSVPSEASLEAWRERLRAAGVPVSGVVDRFGERSLYFEDPD 119

Query: 136 ANALEFT 142
              LE T
Sbjct: 120 GIRLELT 126

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 15/128 (11%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
           +  + HV +   ++E +L+FY  +LG+E+               L  G++ I+L  +   
Sbjct: 1   IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEVGRKA----LRFGSQKINLHPVGGE 56

Query: 83  -DPLSGRPEHGGRDRHTCIAI-RDVSKLKMILDKAGISYTLSKSGR-------PAIFTRD 133
            +P +G P  G      C+     + +L   L+  G+        R        +++ RD
Sbjct: 57  FEPAAGSPGPGS--DDLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRD 114

Query: 134 PDANALEF 141
           PD N +E 
Sbjct: 115 PDGNLIEL 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 10/115 (8%)

Query: 28  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIH-LMELP-NPDPL 85
           H  +  ++LE+SL+FY ++LG+++   +   +  +   +L    E    ++EL  N    
Sbjct: 3   HTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG-- 60

Query: 86  SGRPEHGGRD-RHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAIFTRDPD 135
           +  P   G    H   A+ DV      L++ G+  T           A F +DPD
Sbjct: 61  TEEPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMKGIA-FIKDPD 114

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 1/107 (0%)

Query: 27  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 86
           HH+GI+  +L+ +  F+ ++LGL        +      A+  +G      +EL  P    
Sbjct: 1   HHIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLGDGPAVEVELIQPLDGE 60

Query: 87  GRPE-HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTR 132
              +  G    H    + D+      L+  G+          A   R
Sbjct: 61  SFLDKGGPGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRR 107

Length = 110

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 40.8 bits (96), Expect = 3e-05
 Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 2/94 (2%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-P 84
           + HVGI   +LE + +FY+++LG +++E     +   +  ++ +G   + L+E    D P
Sbjct: 2   IDHVGIAVPDLEEAAKFYEDVLGAQVSEIEELPEQGVKVVFIALGNTKVELLEPLGEDSP 61

Query: 85  LSGRPE-HGGRDRHTCIAIRDVSKLKMILDKAGI 117
           ++   E +GG   H  I + D+      L + G+
Sbjct: 62  IAKFLEKNGGGIHHIAIEVDDIEAALETLKEKGV 95

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 34/121 (28%), Positives = 47/121 (38%), Gaps = 28/121 (23%)

Query: 35  NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG-- 92
           +LERSL FYQ++LGLE+ E           A L  G     L+ L   DP +     G  
Sbjct: 12  DLERSLAFYQDVLGLEVLERTDS------TAVLGTG-GKRPLLVL-EEDPDAPPAPPGTT 63

Query: 93  GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----------AIFTRDPDANALEF 141
           G   H  I +   + L   L        L + G P           A++  DP+ N +E 
Sbjct: 64  GLY-HFAILLPSRADLARAL------RRLIELGIPLEGASDHLVSEALYLSDPEGNGIEI 116

Query: 142 T 142
            
Sbjct: 117 Y 117

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 36.0 bits (84), Expect = 0.002
 Identities = 10/25 (40%), Positives = 19/25 (76%)

Query: 26 VHHVGILCENLERSLEFYQNILGLE 50
          + H+GI   +LE +L+FY+++LG+ 
Sbjct: 1  IDHIGIAVPDLEAALKFYRDVLGVG 25

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|176705 cd08357, Glo_EDI_BRP_like_18, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 34.9 bits (81), Expect = 0.003
 Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 31/134 (23%)

Query: 27  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-----GAEMI-HLMELP 80
            H+ I   +LE +  FY ++LG    E R  +         WV     G +++ HL   P
Sbjct: 1   FHLAIPVRDLEAARAFYGDVLGC--KEGRSSET--------WVDFDFFGHQLVAHLS--P 48

Query: 81  NPDPLSGRPEHGGRD---RHTCIAIR--DVSKLKMILDKAGISYTLSKS----GRP---- 127
           N +  +      G      H  + +   +   L   L+ AG+ + +       G+P    
Sbjct: 49  NFNADASDNAVDGHPVPVPHFGLILSEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQE 108

Query: 128 AIFTRDPDANALEF 141
             F +DP  NALEF
Sbjct: 109 TFFLKDPSGNALEF 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176668 cd07244, FosA, FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

 Score = 34.7 bits (80), Expect = 0.004
 Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 16/119 (13%)

Query: 25  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 84
            ++H+ +   +LERS+ FY ++LG      + H +   +GA+L  G   + L    N  P
Sbjct: 1   GINHITLAVSDLERSVAFYVDLLGF-----KLHVRWD-KGAYLEAGDLWLCLSVDANVGP 54

Query: 85  LSGRPEHGGRDRHTCIAIR--DVSKLKMILDKAGI-SYTLSKSGRPAIFTRDPDANALE 140
                       H   ++   D + LK  L +AG+  +  + S   + +  DPD + LE
Sbjct: 55  AK-------DYTHYAFSVSEEDFASLKEKLRQAGVKEWKENTSEGDSFYFLDPDGHKLE 106

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 121

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 35.0 bits (81), Expect = 0.004
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 25 SVHHVGILCENLERSLEFYQNILGL 49
           +HHV +   +LERS  FY  +LGL
Sbjct: 1  GIHHVELTVRDLERSRAFYDWLLGL 25

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	146
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.91
PRK11478	129	putative lyase; Provisional	99.91
PLN02367	233	lactoylglutathione lyase	99.91
PLN03042	185	Lactoylglutathione lyase; Provisional	99.9
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.89
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.89
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.89
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.89
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.88
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.87
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.87
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.87
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.87
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.87
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.87
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.87
PRK10291	129	glyoxalase I; Provisional	99.86
PLN02300	286	lactoylglutathione lyase	99.86
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.86
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.86
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.86
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.85
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.85
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.85
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.85
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.85
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.85
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.85
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.84
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.84
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.84
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.84
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.84
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.83
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.83
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.83
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.83
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.83
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.83
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.83
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.83
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.83
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.83
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.83
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.83
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.83
PRK06724	128	hypothetical protein; Provisional	99.82
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.82
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.82
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.82
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.81
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.81
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.81
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.8
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.8
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.8
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.8
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.8
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.8
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.8
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.79
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.79
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.79
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.78
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.78
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.78
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.77
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.77
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.76
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.75
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.75
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.75
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.73
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.73
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.73
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.72
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.71
PLN02300	286	lactoylglutathione lyase	99.69
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.63
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.62
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.61
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.55
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.5
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.42
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.37
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.36
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.31
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.3
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	99.24
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.19
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.18
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.95
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.91
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.88
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.83
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.82
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.73
PRK10148	147	hypothetical protein; Provisional	98.73
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.69
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.36
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	97.77
PF15067	236	FAM124: FAM124 family	97.76
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	97.71
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	97.4
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	96.93
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	96.01
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	94.94
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	94.82
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	94.81
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	94.21
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	94.02
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	94.02
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	94.02
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	93.81
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	93.66
PLN02367	233	lactoylglutathione lyase	93.64
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	93.18
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	93.18
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	93.0
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	92.93
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	92.45
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	92.44
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	92.37
PRK11478	129	putative lyase; Provisional	92.06
PF06185	185	YecM: YecM protein; InterPro: IPR010393 This famil	91.81
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	91.57
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	91.52
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	91.36
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	91.34
PLN03042	185	Lactoylglutathione lyase; Provisional	91.28
PRK10291	129	glyoxalase I; Provisional	91.01
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	90.32
COG3865	151	Uncharacterized protein conserved in bacteria [Fun	90.14
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	90.1
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	89.64
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	89.57
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	88.47
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	88.09
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	87.99
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	87.59
cd07268	149	Glo_EDI_BRP_like_4 This conserved domain belongs t	87.5
PRK11700	187	hypothetical protein; Provisional	87.03
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	86.35
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	86.3
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	85.99
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	85.82
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	85.41
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	84.56
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	84.34
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	82.12
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	81.99
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	81.07

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.91  E-value=7.6e-23  Score=132.35  Aligned_cols=121  Identities=21%  Similarity=0.343  Sum_probs=90.6

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCC-----------CCceEEEEEe--CCeEEEEEeeCCCCCCCC--
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----------LPYRGAWLWV--GAEMIHLMELPNPDPLSG--   87 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~-----------~~~~~~~~~~--~~~~~~l~~~~~~~~~~~--   87 (146)
                      +.+++||+|.|+|++++++||++ |||++..+.....           .....+++..  ++..++|+....+.....  
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~~~~   79 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIADHR   79 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcCcCC
Confidence            46899999999999999999998 9999876543211           1123344443  456888887654432211  


Q ss_pred             -CCCCCCCccEEEEEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEee
Q 032146           88 -RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        88 -~~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                       ....+.+..|+||.|+|+++++++|+++|+++..++    .+.+.+|++||||+.|||+|.
T Consensus        80 ~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          80 PAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeEEEEEECCCCCEEEeeec
Confidence             123345678999999999999999999999987543    467889999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PRK11478 putative lyase; Provisional

Probab=99.91  E-value=1.7e-22  Score=128.53  Aligned_cols=123  Identities=23%  Similarity=0.351  Sum_probs=88.2

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeCCCCCCCCCCCCCCCccEEE
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTC   99 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~   99 (146)
                      +.+.+++||+|.|+|++++++||+++||+++...............+.. ++..++++..+........ ....+..|++
T Consensus         2 ~~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~-~~~~g~~hi~   80 (129)
T PRK11478          2 LGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFPFPPERPSR-PEACGLRHLA   80 (129)
T ss_pred             CCcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCCCcEEEEEEecCCCCCCCC-CCCCceeEEE
Confidence            4578899999999999999999999999998643221111101112323 4457777765433221111 1234568999


Q ss_pred             EEeCCHHHHHHHHHHCCCeEecc----CCCceEEEEECCCCCeEEEEee
Q 032146          100 IAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       100 ~~v~d~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      |.|+|+++++++|+++|+++...    ..+.+.+|++|||||.|||+|.
T Consensus        81 f~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~~  129 (129)
T PRK11478         81 FSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYEQ  129 (129)
T ss_pred             EEeCCHHHHHHHHHHcCCeeeccccCCCCCCEEEEEECCCCCEEEEEeC
Confidence            99999999999999999997643    2467889999999999999873

>PLN02367 lactoylglutathione lyase

Probab=99.91  E-value=1.6e-22  Score=138.79  Aligned_cols=121  Identities=16%  Similarity=0.207  Sum_probs=94.2

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeC-------------------CeEEEEEeeCCCCC-
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-------------------AEMIHLMELPNPDP-   84 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~l~~~~~~~~-   84 (146)
                      .+.|++|+|+|++++++||+++||+++..+...+...+..+|+..+                   +..++|......+. 
T Consensus        75 ~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~~  154 (233)
T PLN02367         75 IMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTESD  154 (233)
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCcc
Confidence            4899999999999999999999999998877766666677777431                   34788877555432 


Q ss_pred             -CCCCCC----CCCCccEEEEEeCCHHHHHHHHHHCCCeEeccCC---CceEEEEECCCCCeEEEEeec
Q 032146           85 -LSGRPE----HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        85 -~~~~~~----~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~---g~~~~~~~DpdG~~ie~~~~~  145 (146)
                       ......    ...|..|+||.|+|+++++++|+++|+++...+.   ..+.+|++|||||+|||+|.+
T Consensus       155 ~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~~riaFIkDPDGn~IEL~e~~  223 (233)
T PLN02367        155 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDLK  223 (233)
T ss_pred             ccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCceEEEEEECCCCCEEEEEecc
Confidence             111111    1246899999999999999999999999875442   246789999999999999975

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.90  E-value=7.1e-22  Score=132.65  Aligned_cols=122  Identities=17%  Similarity=0.226  Sum_probs=91.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-------------------CCeEEEEEeeCCCCC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-------------------GAEMIHLMELPNPDP   84 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~l~~~~~~~~   84 (146)
                      -++.|++|+|.|++++++||+++|||++..+...+...+..+++..                   ++..++|+.......
T Consensus        26 ~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~~  105 (185)
T PLN03042         26 YIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTES  105 (185)
T ss_pred             cEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCcc
Confidence            3699999999999999999999999999887654444445555532                   235888887544322


Q ss_pred             CC-----C-CCCCCCCccEEEEEeCCHHHHHHHHHHCCCeEeccCC---CceEEEEECCCCCeEEEEeec
Q 032146           85 LS-----G-RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        85 ~~-----~-~~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~---g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      .+     . ......+..|++|.|+|+++++++|+++|+.+...+.   +.+.+|++|||||+|||++..
T Consensus       106 ~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~~~~~fi~DPdG~~IEl~e~~  175 (185)
T PLN03042        106 DPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLK  175 (185)
T ss_pred             cccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCceeEEEEECCCCCEEEEEECC
Confidence            10     0 0111246799999999999999999999999875431   346678899999999999875

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.89  E-value=1.1e-21  Score=123.72  Aligned_cols=119  Identities=27%  Similarity=0.436  Sum_probs=86.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEe
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  102 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v  102 (146)
                      .+++||+|.|.|++++++||+++||++................+.. ++..++++...........+ ...+..|++|.|
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~-~~~g~~h~~~~v   80 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSFPNPPERPSYP-EACGLRHLAFSV   80 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEcCCCCCCCCCC-cCCCceEEEEEe
Confidence            5799999999999999999999999998764332221111122333 45677777654432211112 234568999999


Q ss_pred             CCHHHHHHHHHHCCCeEecc----CCCceEEEEECCCCCeEEEEe
Q 032146          103 RDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       103 ~d~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DpdG~~ie~~~  143 (146)
                      +|+++++++|+++|+++...    ..+.+.+|++||+||+|||+|
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          81 EDIEAAVKHLKAKGVEVEPIRVDEFTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             CCHHHHHHHHHHcCCccccccccCCCceEEEEEECCCCCEEEecC
Confidence            99999999999999998643    245678999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.89  E-value=5.5e-22  Score=127.70  Aligned_cols=119  Identities=13%  Similarity=0.058  Sum_probs=88.7

Q ss_pred             eeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCC--CCCCCCCccEEEEEeC
Q 032146           26 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAIR  103 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~hl~~~v~  103 (146)
                      ++|+.|.|+|++++++||+++|||++..+....  ....+++..++..+.+...........  ....+.+..|++|.|+
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia~~V~   78 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLRQGDINFVLNSPLNSFAPVADFLEKHGDGVCDVAFRVD   78 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEEcCCEEEEEecCCCCCCchHHHHHhcCCceEEEEEEeC
Confidence            589999999999999999999999988754422  123344555666777665333221110  1123456789999999


Q ss_pred             CHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeecC
Q 032146          104 DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVDG  146 (146)
Q Consensus       104 d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~~  146 (146)
                      |+++.+++|+++|+++..++    .+.+.++++||||++|||+|.++
T Consensus        79 Dvda~~~~l~~~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~~  125 (136)
T cd08342          79 DAAAAYERAVARGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRKG  125 (136)
T ss_pred             CHHHHHHHHHHcCCeEccCceecCCeEEEEEEeccCCcEEEEEecCC
Confidence            99999999999999986543    45688999999999999999753

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.89  E-value=1.6e-21  Score=129.03  Aligned_cols=122  Identities=22%  Similarity=0.263  Sum_probs=89.2

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeecccc----CC--------------CCCCceEEEEEeC-CeEEEEEeeCCCCC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEAR----PH--------------DKLPYRGAWLWVG-AEMIHLMELPNPDP   84 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~----~~--------------~~~~~~~~~~~~~-~~~~~l~~~~~~~~   84 (146)
                      .+++||+|.|+|++++++||+++|||++..+.    ..              ....+..+++..+ +..++|+.......
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~~~   82 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQEN   82 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCCCC
Confidence            57999999999999999999999999875321    10              0112345666654 45799998765433


Q ss_pred             CCCCC-CCCCCccEEEEEeCCHHHHHHHHHHCCCeEeccC-----C---CceEEEEECCCCCeEEEEeec
Q 032146           85 LSGRP-EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK-----S---GRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        85 ~~~~~-~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~-----~---g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      +...+ ..+.+..|+||.|+|+++++++|+++|+.+....     .   +.+.+|++|||||+|||++++
T Consensus        83 ~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  152 (162)
T TIGR03645        83 PEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHS  152 (162)
T ss_pred             CCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcC
Confidence            22221 2245679999999999999999999998753221     1   247899999999999999875

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.89  E-value=1.1e-21  Score=123.88  Aligned_cols=117  Identities=23%  Similarity=0.318  Sum_probs=84.7

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeC-CeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeC
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  103 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~  103 (146)
                      +++|+.|.|+|++++++||+++||+++.............+|+..+ +..++|+..+...... ......+..|+||.|+
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~g~~hi~f~v~   79 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTRPDIAPSP-NEGERTGWAHLAFSVG   79 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcCcccCCCc-ccCCCCceEEEEEECC
Confidence            4789999999999999999999999986543222223345666664 4578887644322111 1122245689999996


Q ss_pred             ---CHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEE
Q 032146          104 ---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFT  142 (146)
Q Consensus       104 ---d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~  142 (146)
                         ++++++++|+++|+++...+    .+.+.++++|||||.|||.
T Consensus        80 ~~~~v~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          80 SKEAVDELTERLRADGYLIIGEPRTTGDGYYESVILDPEGNRIEIT  125 (125)
T ss_pred             CHHHHHHHHHHHHHCCCEEEeCceecCCCeEEEEEECCCCCEEEeC
Confidence               58999999999999987533    3456688999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.88  E-value=3.1e-21  Score=124.61  Aligned_cols=113  Identities=23%  Similarity=0.361  Sum_probs=87.8

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEE
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  101 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~  101 (146)
                      ++.+++|+.|.|+|++++++||+++||+++..+..      ..+++..++..+.+...+...    ......+..|++|.
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~g~~l~l~~~~~~~----~~~~~~~~~hiaf~   70 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLNGLWIALNEEKDIP----RNEIHQSYTHIAFS   70 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecCCeEEEeeccCCCC----CccCCCCeeEEEEE
Confidence            46789999999999999999999999999876422      346677777777765432111    11123445799999


Q ss_pred             eC--CHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEee
Q 032146          102 IR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       102 v~--d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++  |+++++++|+++|+++...+    .+++.+|++|||||+|||.+.
T Consensus        71 v~~~dv~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~  119 (139)
T PRK04101         71 IEEEDFDHWYQRLKENDVNILPGRERDERDKKSIYFTDPDGHKFEFHTG  119 (139)
T ss_pred             ecHHHHHHHHHHHHHCCceEcCCccccCCCceEEEEECCCCCEEEEEeC
Confidence            98  99999999999999985432    467999999999999999864

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.87  E-value=6.2e-21  Score=122.06  Aligned_cols=115  Identities=17%  Similarity=0.276  Sum_probs=85.0

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCC-ceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      ++.+++|++|.|+|++++++||+++||++...+....... ....++..++..+++......        ...+..|++|
T Consensus         1 mi~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~--------~~~~~~Hiaf   72 (131)
T cd08364           1 MIEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIGGLWIAIMEGDSL--------QERTYNHIAF   72 (131)
T ss_pred             CcccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcCCeEEEEecCCCC--------CCCCceEEEE
Confidence            3678999999999999999999999999876543321111 112334456667777532211        1124689999


Q ss_pred             EeC--CHHHHHHHHHHCCCeEeccC---C-CceEEEEECCCCCeEEEEee
Q 032146          101 AIR--DVSKLKMILDKAGISYTLSK---S-GRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       101 ~v~--d~~~~~~~l~~~G~~~~~~~---~-g~~~~~~~DpdG~~ie~~~~  144 (146)
                      .|+  ++++++++|+++|+++..+.   . .++.+|++|||||.|||.+.
T Consensus        73 ~v~~~~ld~~~~~l~~~gv~~~~~~~~~~~~g~~~yf~DPdG~~iEl~~~  122 (131)
T cd08364          73 KISDSDVDEYTERIKALGVEMKPPRPRVQGEGRSIYFYDFDNHLFELHTG  122 (131)
T ss_pred             EcCHHHHHHHHHHHHHCCCEEecCCccccCCceEEEEECCCCCEEEEecC
Confidence            998  79999999999999986542   2 46899999999999999864

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.87  E-value=7.5e-21  Score=119.50  Aligned_cols=114  Identities=21%  Similarity=0.315  Sum_probs=84.7

Q ss_pred             eeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC----eEEEEEeeCCCCCCCCCCCCCCCccEEEEE
Q 032146           26 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIA  101 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~  101 (146)
                      |.|++|.|+|++++++||+++||+++.............+++..++    ..+++........   ....+.+..|++|.
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~i~~~   77 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEE---PYDNGNGFGHLAFA   77 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCC---CcCCCCCeEEEEEE
Confidence            5799999999999999999999999876543332233446666543    4566554332211   11222356899999


Q ss_pred             eCCHHHHHHHHHHCCCeEeccC---CCceEEEEECCCCCeEEEE
Q 032146          102 IRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFT  142 (146)
Q Consensus       102 v~d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DpdG~~ie~~  142 (146)
                      ++|+++++++++++|+.+...+   .+.+.+|++|||||+|||+
T Consensus        78 v~did~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          78 VDDVYAACERLEEMGVEVTKPPGDGGMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             eCCHHHHHHHHHHCCCEEeeCCccCCCceEEEEECCCCCEEEeC
Confidence            9999999999999999987654   3567889999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.87  E-value=7.5e-21  Score=124.30  Aligned_cols=122  Identities=23%  Similarity=0.310  Sum_probs=85.7

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe----EEEEEeeCCCCCCCCCCCCCCCc
Q 032146           20 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRD   95 (146)
Q Consensus        20 ~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~   95 (146)
                      .....+++|+.|.|+|++++++||+++|||++..+..........+++..++.    .+++.....  ..  ....+.+.
T Consensus        12 ~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~--~~~~~~g~   87 (150)
T TIGR00068        12 KTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWG--TE--KYDLGNGF   87 (150)
T ss_pred             ccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCC--CC--cccCCCce
Confidence            34567899999999999999999999999998765433222223344544321    233222111  11  11223456


Q ss_pred             cEEEEEeCCHHHHHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEeec
Q 032146           96 RHTCIAIRDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        96 ~hl~~~v~d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      .|++|.|+|+++++++|.++|+++...+     .+.+.+|++|||||+|||++..
T Consensus        88 ~hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  142 (150)
T TIGR00068        88 GHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRK  142 (150)
T ss_pred             eEEEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECC
Confidence            8999999999999999999999876433     2346789999999999999865

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.87  E-value=3.4e-21  Score=122.17  Aligned_cols=119  Identities=20%  Similarity=0.400  Sum_probs=87.3

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCC--CCCCCCCccEEEEEe
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAI  102 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~hl~~~v  102 (146)
                      +++|+.|.|+|++++++||+++||++..............+++..++..++|...........  ......+..|+||.|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i~~~v   80 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEPLGEDSPIAKFLEKNGGGIHHIAIEV   80 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCEEEEEEecCCCCChHHHHHhcCCCceEEEEEEc
Confidence            478999999999999999999999998764332233345667777778888876432221110  011234567999999


Q ss_pred             CCHHHHHHHHHHCCCeEecc-C----CCceEEEE--ECCCCCeEEEEe
Q 032146          103 RDVSKLKMILDKAGISYTLS-K----SGRPAIFT--RDPDANALEFTQ  143 (146)
Q Consensus       103 ~d~~~~~~~l~~~G~~~~~~-~----~g~~~~~~--~DpdG~~ie~~~  143 (146)
                      +|+++++++|.++|+++..+ +    .|.+.+|+  +||||++||++|
T Consensus        81 ~di~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        81 DDIEAALETLKEKGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence            99999999999999998643 2    23455666  699999999976

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.87  E-value=6.7e-21  Score=117.87  Aligned_cols=110  Identities=40%  Similarity=0.745  Sum_probs=86.0

Q ss_pred             eeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe-EEEEEeeCCCCCCCCCCCCCCCccEEEEEeCC
Q 032146           26 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  104 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d  104 (146)
                      |+|++|.|+|++++++||+++||+++..+....   ...+|+..++. .+++...+.....   +..+.+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~i~l~~~~~~~~~---~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL---FPGAWLYAGDGPQLHLIEEDPPDAL---PEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC---CCceEEEeCCCcEEEEEecCCCccc---cCCCcccceEEEEeCC
Confidence            589999999999999999999999987643322   13466777655 7777766554321   2233456899999999


Q ss_pred             HHHHHHHHHHCCCeEeccC---CCceEEEEECCCCCeEEE
Q 032146          105 VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEF  141 (146)
Q Consensus       105 ~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DpdG~~ie~  141 (146)
                      +++++++++++|+.+...+   .+.+.+++.||+||+|||
T Consensus        75 ~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHHcCCCcccccCCCCCccEEEEECCCCCEEeC
Confidence            9999999999999986643   467889999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.87  E-value=1.4e-20  Score=123.95  Aligned_cols=113  Identities=17%  Similarity=0.235  Sum_probs=84.7

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeC---CeEEEEEeeCCCCCCCCCCCCCCCccEEEEE
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  101 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~  101 (146)
                      +++||+|.|+|++++++||+++|||++..+..     ....+...+   +..++++.......   ......+..|++|.
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~-----~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~l~Hiaf~   72 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG-----DRVRLEEGGGGPGAVVDVLEEPDQPR---GRPGAGTVHHVAFR   72 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC-----CEEEEEecCCCCCCEEEEEeCCCCCC---CcccCCceEEEEEE
Confidence            58999999999999999999999999876543     123334433   56777777432111   11122456899999


Q ss_pred             eCC---HHHHHHHHHHCCCeEeccC--CCceEEEEECCCCCeEEEEeec
Q 032146          102 IRD---VSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       102 v~d---~~~~~~~l~~~G~~~~~~~--~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |+|   +++++++|+++|+.+....  .+.+++|++|||||.|||++..
T Consensus        73 v~d~~dvd~~~~~L~~~Gv~~~~~~~~~~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          73 VPDDEELEAWKERLEALGLPVSGIVDRFYFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CCCHHHHHHHHHHHHHCCCCcccccccccEEEEEEECCCCcEEEEEECC
Confidence            997   9999999999999864432  3457899999999999999865

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.87  E-value=2.7e-20  Score=117.27  Aligned_cols=117  Identities=21%  Similarity=0.373  Sum_probs=87.6

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEe
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  102 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v  102 (146)
                      +.+++|+.|.|+|++++++||+++||++.....+..    ...++..++..+++........+ .......+..|++|.+
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~hi~~~~   75 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV----GRKALRFGSQKINLHPVGGEFEP-AAGSPGPGSDDLCLIT   75 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC----CceEEEeCCEEEEEecCCCccCc-CccCCCCCCceEEEEe
Confidence            467999999999999999999999999988754321    23456666677777664432211 1112334568999999


Q ss_pred             CC-HHHHHHHHHHCCCeEeccC-------CCceEEEEECCCCCeEEEEee
Q 032146          103 RD-VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       103 ~d-~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++ +++++++|.++|+++...+       .+++.+|+.|||||+||+.++
T Consensus        76 ~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  125 (125)
T cd07253          76 EPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSNY  125 (125)
T ss_pred             cccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeeeC
Confidence            84 9999999999999876432       235789999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK10291 glyoxalase I; Provisional

Probab=99.86  E-value=9.1e-21  Score=120.86  Aligned_cols=112  Identities=21%  Similarity=0.347  Sum_probs=80.5

Q ss_pred             EEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC----eEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCCH
Q 032146           30 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  105 (146)
Q Consensus        30 ~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d~  105 (146)
                      +|.|+|++++++||+++|||++..+...+...+..+++..++    ..+++......    .....+.+..|+||.|+|+
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~g~~~~hlaf~V~d~   76 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV----DKYELGTAYGHIALSVDNA   76 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCC----CCCcCCCCeeEEEEEeCCH
Confidence            478999999999999999999877655444445566665543    13444321111    1112334678999999999


Q ss_pred             HHHHHHHHHCCCeEeccC----CC-ceEEEEECCCCCeEEEEeec
Q 032146          106 SKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       106 ~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DpdG~~ie~~~~~  145 (146)
                      ++++++|+++|+.+...+    .+ .+.+|+.|||||+|||++..
T Consensus        77 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~  121 (129)
T PRK10291         77 AEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  121 (129)
T ss_pred             HHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEcc
Confidence            999999999999876432    23 35678999999999999854

>PLN02300 lactoylglutathione lyase

Probab=99.86  E-value=1.6e-20  Score=134.64  Aligned_cols=123  Identities=24%  Similarity=0.314  Sum_probs=90.2

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe----EEEEEeeCCCCCCCCCCCCCCC
Q 032146           19 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGR   94 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~   94 (146)
                      +.+.+.++.|++|.|+|++++++||+++|||++..+...+......+|+..++.    .+++.....  .  .....+.+
T Consensus        18 ~~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~--~--~~~~~~~g   93 (286)
T PLN02300         18 PKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYG--V--DKYDIGTG   93 (286)
T ss_pred             CccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCC--C--CccccCCC
Confidence            446789999999999999999999999999998765433333334566655421    344432211  1  11123356


Q ss_pred             ccEEEEEeCCHHHHHHHHHHCCCeEeccC----C-CceEEEEECCCCCeEEEEeec
Q 032146           95 DRHTCIAIRDVSKLKMILDKAGISYTLSK----S-GRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        95 ~~hl~~~v~d~~~~~~~l~~~G~~~~~~~----~-g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      ..|++|.|+|+++++++|+++|+++...+    . +.+.+|++|||||+|||+++.
T Consensus        94 ~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  149 (286)
T PLN02300         94 FGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRG  149 (286)
T ss_pred             ccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCC
Confidence            78999999999999999999999886543    2 346789999999999999875

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.86  E-value=1.7e-20  Score=121.74  Aligned_cols=114  Identities=17%  Similarity=0.253  Sum_probs=80.3

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCC-ceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEE
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC   99 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~   99 (146)
                      +.+.+|+|++|.|+|++++++||+++|||++..+...+... ...+|+..+.. .+.+....      .+  ..+..|+|
T Consensus         2 ~~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~-~h~~~~~~------~~--~~~~~Hia   72 (143)
T cd07243           2 IGAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK-PHDIAFVG------GP--DGKLHHFS   72 (143)
T ss_pred             CCCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC-cceEEEec------CC--CCCceEEE
Confidence            34678999999999999999999999999976543221111 12455554332 22222111      01  14568999


Q ss_pred             EEeCCHHH---HHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEe
Q 032146          100 IAIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       100 ~~v~d~~~---~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~  143 (146)
                      |.|+|+++   +.++|+++|+++...+     .+.+.+|++|||||+||+++
T Consensus        73 f~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~  124 (143)
T cd07243          73 FFLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFA  124 (143)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEec
Confidence            99998887   5689999999986432     23578999999999999975

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.86  E-value=1.5e-20  Score=120.28  Aligned_cols=110  Identities=23%  Similarity=0.399  Sum_probs=85.0

Q ss_pred             eeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeC--
Q 032146           26 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--  103 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~--  103 (146)
                      |+||.|.|+|++++++||+++||+++....+      ..+++..++.++.+...+...    .....++..|++|.++  
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~----~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE------KTAYFTIGGTWLALNEEPDIP----RNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC------ccceEeeCceEEEEEccCCCC----cCCcCccceEEEEEecHH
Confidence            5899999999999999999999999876432      234566777777775543211    1111245689999998  


Q ss_pred             CHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeec
Q 032146          104 DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       104 d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |+++++++|++.|+.+..++    .+++.+|+.|||||+|||.+..
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRDVRDRKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCccccCcceEEEEECCCCCEEEEecCc
Confidence            59999999999999975432    3678999999999999998764

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.86  E-value=4.4e-20  Score=122.62  Aligned_cols=118  Identities=22%  Similarity=0.358  Sum_probs=83.1

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      |.+.+|+|++|.|+|++++++||+++|||++..............|+..++....+........      ..++..|+||
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~------~~~~~~hiaf   75 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKVHDVAYTRDPAG------ARGRLHHLAY   75 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCceeEEEecCCCC------CCCCceEEEE
Confidence            5688999999999999999999999999998754332222223466666443222222211110      1134689999


Q ss_pred             EeCC---HHHHHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEee
Q 032146          101 AIRD---VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       101 ~v~d---~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      .|+|   +++++++|+++|+++...+     ...+.+|++|||||+|||.+.
T Consensus        76 ~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          76 ALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            9985   5578899999999975332     123468999999999999886

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.85  E-value=2.3e-19  Score=113.19  Aligned_cols=116  Identities=16%  Similarity=0.186  Sum_probs=84.1

Q ss_pred             EEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCCHHHH
Q 032146           29 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  108 (146)
Q Consensus        29 v~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d~~~~  108 (146)
                      ..|.|+|++++++||+++||+++....+........+.+..++..+.+.................+..|++|.|+|++++
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~d~~   82 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGDGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDDVDAH   82 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECCEEEEEecCCCcccccccccCCCceEEEEEEECCHHHH
Confidence            46889999999999999999999875432222223445666776666655443221110112223457999999999999


Q ss_pred             HHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEee
Q 032146          109 KMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       109 ~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +++|+++|+++..++    .|.+.++++|||||+|+|.++
T Consensus        83 ~~~l~~~G~~v~~~~~~~~~g~~~~~~~DPdG~~~~l~~~  122 (122)
T cd08355          83 YERARAAGAEILREPTDTPYGSREFTARDPEGNLWTFGTY  122 (122)
T ss_pred             HHHHHHCCCEEeeCccccCCCcEEEEEECCCCCEEEEecC
Confidence            999999999987543    467889999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.85  E-value=1.6e-19  Score=114.48  Aligned_cols=109  Identities=18%  Similarity=0.280  Sum_probs=81.7

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      .++.+|.|+.|.|+|++++++||+++|||++..+..      ..+|+..++....+......          .+..|++|
T Consensus         2 ~~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~i~l~~~~----------~~~~~iaf   65 (124)
T cd08361           2 IELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA------KATYFRSDARDHTLVYIEGD----------PAEQASGF   65 (124)
T ss_pred             ceEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC------CeEEEEcCCccEEEEEEeCC----------CceEEEEE
Confidence            467899999999999999999999999999876432      24667665332222221111          12478999


Q ss_pred             EeCC---HHHHHHHHHHCCCeEeccC-------CCceEEEEECCCCCeEEEEeec
Q 032146          101 AIRD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       101 ~v~d---~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      +|++   +++++++|+++|+++...+       .+.+.+|+.|||||.||++..+
T Consensus        66 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          66 ELRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             EECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            9985   9999999999999986532       2356789999999999998765

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.85  E-value=2.2e-19  Score=113.52  Aligned_cols=113  Identities=28%  Similarity=0.369  Sum_probs=84.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC--eEEEEEeeCCCCCCCCCCCCCCCccEEEEE
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIA  101 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~  101 (146)
                      ++|+|+.|.|+|++++++||+++|||++....+      ..+++..++  ..+.+...+...   .......+..|++|.
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~~~~~l~l~~~~~~~---~~~~~~~~~~hi~f~   71 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGGKRPLLVLEEDPDAP---PAPPGATGLYHFAIL   71 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCCCeEEEEEEeCCCCC---cccCCCCcEEEEEEE
Confidence            368999999999999999999999999987632      246666655  355555443321   112223456899999


Q ss_pred             eC---CHHHHHHHHHHCCCeEeccC--CCceEEEEECCCCCeEEEEeec
Q 032146          102 IR---DVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       102 v~---d~~~~~~~l~~~G~~~~~~~--~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |+   ++++++++|+++|+.+..+.  ...+.+|+.|||||+|||.+.-
T Consensus        72 v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~~  120 (125)
T cd07255          72 LPSRADLAAALRRLIELGIPLVGASDHLVSEALYLSDPEGNGIEIYADR  120 (125)
T ss_pred             CCCHHHHHHHHHHHHHcCCceeccccccceeEEEEECCCCCEEEEEEec
Confidence            97   58999999999999876433  2347899999999999998754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.85  E-value=1.2e-19  Score=114.73  Aligned_cols=106  Identities=21%  Similarity=0.318  Sum_probs=80.2

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEe
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  102 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v  102 (146)
                      .+++|+.|.|+|++++++||+++||++......      ..+++.. ++..+.+..... .         .+..|++|.+
T Consensus         3 ~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~l~~~~~~~-~---------~~~~h~a~~v   66 (123)
T cd08351           3 VTLNHTIVPARDREASAEFYAEILGLPWAKPFG------PFAVVKLDNGVSLDFAQPDG-E---------IPPQHYAFLV   66 (123)
T ss_pred             ceEeEEEEEcCCHHHHHHHHHHhcCCEeeeccC------CEEEEEcCCCcEEEEecCCC-C---------CCcceEEEEe
Confidence            578999999999999999999999999876321      1233333 334555443211 1         2248999998


Q ss_pred             C--CHHHHHHHHHHCCCeEecc-----------CCCceEEEEECCCCCeEEEEeec
Q 032146          103 R--DVSKLKMILDKAGISYTLS-----------KSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       103 ~--d~~~~~~~l~~~G~~~~~~-----------~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      +  |+++++++|+++|+++...           ..+.+.+|++|||||.|||++.|
T Consensus        67 ~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  122 (123)
T cd08351          67 SEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITRP  122 (123)
T ss_pred             CHHHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEecc
Confidence            7  6999999999999997432           24679999999999999999875

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.85  E-value=9.8e-20  Score=114.62  Aligned_cols=113  Identities=14%  Similarity=0.131  Sum_probs=76.2

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCC
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  104 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d  104 (146)
                      ++.++.|.|+|++++++||+++||+++....+      ....+. ++..+.+...............+.+..|++|.|+|
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~v~d   74 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG------ENVTFE-GGFALQEGYSWLEGISKADIIEKSNNFELYFEEED   74 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeeccC------ceEEEe-ccceeccchhhhccCCcccccccCCceEEEEEehh
Confidence            57899999999999999999999999865332      111121 22222221110000000111122334799999999


Q ss_pred             HHHHHHHHHHCCC-eEecc----CCCceEEEEECCCCCeEEEEee
Q 032146          105 VSKLKMILDKAGI-SYTLS----KSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       105 ~~~~~~~l~~~G~-~~~~~----~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +++++++|+++|. ++..+    ++|.+.++++|||||+|||.+.
T Consensus        75 vd~~~~~l~~~g~~~~~~~~~~~~~g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          75 FDAFLDKLKRYDNIEYVHPIKEHPWGQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             hHHHHHHHHhcCCcEEecCcccCCCccEEEEEECCCCCEEEEecc
Confidence            9999999999985 56433    2567899999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.85  E-value=1.3e-19  Score=113.02  Aligned_cols=106  Identities=15%  Similarity=0.181  Sum_probs=79.6

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEe
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  102 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v  102 (146)
                      +.+++|+.|.|+|++++++||++ |||+...+..      ..+|+..++....++......        ..+..|++|.|
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~af~v   65 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD------DELYYRGYGTDPFVYVARKGE--------KARFVGAAFEA   65 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC------CeEEEecCCCccEEEEcccCC--------cCcccEEEEEE
Confidence            46899999999999999999999 9999866432      245666543322232221111        13468999999


Q ss_pred             CCHHHHHHHHHHCCCeEecc---CCCceEEEEECCCCCeEEEEe
Q 032146          103 RDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       103 ~d~~~~~~~l~~~G~~~~~~---~~g~~~~~~~DpdG~~ie~~~  143 (146)
                      +|.+++.+.+++.|+.....   +.+.+.+++.|||||.||++.
T Consensus        66 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~  109 (113)
T cd07267          66 ASRADLEKAAALPGASVIDDLEAPGGGKRVTLTDPDGFPVELVY  109 (113)
T ss_pred             CCHHHHHHHHHcCCCeeecCCCCCCCceEEEEECCCCCEEEEEe
Confidence            99999999999999987543   346789999999999999975

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.85  E-value=1.6e-19  Score=112.67  Aligned_cols=113  Identities=21%  Similarity=0.303  Sum_probs=81.1

Q ss_pred             eEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeC---CeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCC
Q 032146           28 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  104 (146)
Q Consensus        28 hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d  104 (146)
                      ||+|.|.|++++++||.++|||++..+..... ....+.+...   +..+++........  ..+...++..|++|.|+|
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~v~d   77 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGSPETSLVLAPPANPAA--MSGLQPGGTPGLVLATDD   77 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCCCeeEEEEeCCCCccc--cccccCCCceEEEEEehH
Confidence            79999999999999999999999987654211 2222323322   23444443332211  112233556899999999


Q ss_pred             HHHHHHHHHHCCCeEeccC---CCceEEEEECCCCCeEEEEe
Q 032146          105 VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       105 ~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DpdG~~ie~~~  143 (146)
                      +++++++|+++|+.+..++   .+++.++++||+||+|||+|
T Consensus        78 i~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          78 IDATYEELKARGVEFSEEPREMPYGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHHhCCCEEeeccccCCCceEEEEECCCCCEEEEeC
Confidence            9999999999999987544   35689999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.84  E-value=2.2e-19  Score=114.04  Aligned_cols=114  Identities=25%  Similarity=0.346  Sum_probs=86.1

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhc---CCeeccccCCCCCCceEEEEEe-CCeEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           25 SVHHVGILCENLERSLEFYQNIL---GLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~l---g~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      +|+||.|.|+|++++++||+++|   ||++......     ...|... ++..+.++........ .......+..|++|
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~-----~~~~~~~~~~~~i~l~~~~~~~~~-~~~~~~~g~~hia~   74 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED-----GRSWRAGDGGTYLVLQQADGESAG-RHDRRNPGLHHLAF   74 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc-----CceEEecCCceEEEEEecccCCCc-ccccCCcCeeEEEE
Confidence            57999999999999999999999   9998775421     1244443 6678888765544321 11123345689999


Q ss_pred             EeC---CHHHHHHHHHHCCCeEeccC-------CCceEEEEECCCCCeEEEEee
Q 032146          101 AIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       101 ~v~---d~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      .|+   |+++++++|+++|+.+...+       .+.+.+|++|||||+|||+.+
T Consensus        75 ~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          75 RAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             EcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            997   58999999999999986532       256889999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.84  E-value=2.4e-19  Score=111.68  Aligned_cols=109  Identities=17%  Similarity=0.191  Sum_probs=81.9

Q ss_pred             eeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC-eEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCC
Q 032146           26 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  104 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d  104 (146)
                      +.|++|.|+|++++++||+++||+++..... ..  ...+++..++ ..+.++......      .......|++|.++|
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~f~v~d   71 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GG--GDYAVFSTGGGAVGGLMKAPEPA------AGSPPGWLVYFAVDD   71 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CC--CceEEEEeCCccEEEEecCCCCC------CCCCCeEEEEEEeCC
Confidence            4799999999999999999999999876543 11  1334555554 344555443322      112335799999999


Q ss_pred             HHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEe
Q 032146          105 VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       105 ~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~  143 (146)
                      +++++++|+++|+++..++    .+++.++++|||||.|+|+|
T Consensus        72 i~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          72 VDAAAARVEAAGGKVLVPPTDIPGVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHHCCCEEEeCCcccCCcEEEEEEECCCCCEEEeEC
Confidence            9999999999999986543    36788999999999999986

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.84  E-value=2e-19  Score=113.34  Aligned_cols=108  Identities=18%  Similarity=0.211  Sum_probs=80.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  103 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~  103 (146)
                      +++.||.|.|+|++++++||+++|||++..+...     ..+|+..++..+.+...+...         .+..|++|.++
T Consensus         1 ~~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~---------~~~~~~~f~v~   66 (120)
T cd07252           1 KSLGYLGVESSDLDAWRRFATDVLGLQVGDRPED-----GALYLRMDDRAWRIAVHPGEA---------DDLAYAGWEVA   66 (120)
T ss_pred             CcccEEEEEeCCHHHHHHHHHhccCceeccCCCC-----CeEEEEccCCceEEEEEeCCC---------CceeEEEEEEC
Confidence            3689999999999999999999999998654221     246666654433333322111         23579999997


Q ss_pred             ---CHHHHHHHHHHCCCeEeccC-------CCceEEEEECCCCCeEEEEeec
Q 032146          104 ---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       104 ---d~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                         |+++++++|+++|+++...+       .+.+.+|++|||||.|||+..+
T Consensus        67 ~~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          67 DEAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             CHHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence               58999999999999987532       2347899999999999998643

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.84  E-value=9.9e-20  Score=114.76  Aligned_cols=108  Identities=21%  Similarity=0.315  Sum_probs=81.8

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC----eEEEEEeeCCCCCCCCCCCCCCCcc
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDR   96 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~   96 (146)
                      |.+.+++|+.|.|+|++++++||+++||+++..+.+      ..+|+...+    ..+.+..  ..         ..+..
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~--~~---------~~~~~   64 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTE--SP---------EAGLG   64 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEee--CC---------CCceE
Confidence            567899999999999999999999999999887533      235565432    1222221  11         13468


Q ss_pred             EEEEEeC---CHHHHHHHHHHCCCeEecc---CCCceEEEEECCCCCeEEEEeec
Q 032146           97 HTCIAIR---DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        97 hl~~~v~---d~~~~~~~l~~~G~~~~~~---~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |++|.++   ++++++++++++|+++...   +..+..+|++|||||.||+....
T Consensus        65 h~af~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          65 HIAWRASSPEALERRVAALEASGLGIGWIEGDPGHGKAYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             EEEEEcCCHHHHHHHHHHHHHcCCccccccCCCCCcceEEEECCCCCEEEEEEec
Confidence            9999997   6889999999999987432   24567899999999999998753

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.84  E-value=1.3e-19  Score=114.78  Aligned_cols=118  Identities=22%  Similarity=0.354  Sum_probs=88.3

Q ss_pred             eeeEEEEeCCHHHHHHHHhhhcCCeeccccCCC-CCCceEEEEEeCCeEEEEEeeCCCCCCCC--CCCCCCCccEEEEEe
Q 032146           26 VHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAI  102 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~hl~~~v  102 (146)
                      ++||.|.|+|++++++||+++||++........ ......+++..++..++++..........  ....+.+..|++|.|
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~~f~v   80 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLGNVQIELIEPLDDDSPIAKFLEKRGEGLHHIAFEV   80 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcCCEEEEEEEECCCCCcHHHHHhcCCCceEEEEEEe
Confidence            579999999999999999999999998755432 22334677777888888887554322211  112345678999999


Q ss_pred             CCHHHHHHHHHHCCCeEeccC----CCceEEEEECCC---CCeEEEEe
Q 032146          103 RDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPD---ANALEFTQ  143 (146)
Q Consensus       103 ~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~Dpd---G~~ie~~~  143 (146)
                      +|+++++++++++|+++..++    .+++.+++.||+   ||+|||+|
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          81 DDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            999999999999999986543    345555555555   99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.83  E-value=1.5e-19  Score=114.11  Aligned_cols=116  Identities=21%  Similarity=0.400  Sum_probs=83.9

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCC-CceEEEEEe----CCeEEEEEeeCCCCCCCCCCCCCCCccEEE
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKL-PYRGAWLWV----GAEMIHLMELPNPDPLSGRPEHGGRDRHTC   99 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~-~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~   99 (146)
                      +++||+|.|.|++++++||+++||++...+...... .....++..    ++..++|+..+.....  ......+..|++
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~--~~~~~~~~~hi~   78 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPK--GRRGPGQIHHIA   78 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCC--CCCCCCcEEEEE
Confidence            478999999999999999999999998876542221 112233332    3457777765443221  112224468999


Q ss_pred             EEeC---CHHHHHHHHHHCCCeEeccC--CCceEEEEECCCCCeEEEE
Q 032146          100 IAIR---DVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFT  142 (146)
Q Consensus       100 ~~v~---d~~~~~~~l~~~G~~~~~~~--~g~~~~~~~DpdG~~ie~~  142 (146)
                      |.++   ++++++++++++|+++..+.  .+++.+|++||+||+||++
T Consensus        79 f~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          79 FSVPSEASLDAWRERLRAAGVPVSGVVDHFGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCcccceEeecceEEEEEECCCCCEEEeC
Confidence            9998   57999999999999876432  4678999999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.83  E-value=1.8e-19  Score=113.65  Aligned_cols=107  Identities=26%  Similarity=0.413  Sum_probs=81.9

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeC-
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  103 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~-  103 (146)
                      +++|+.|.|+|++++++||+++||++.....+      ..+++..++..+.+.......       ...+..|++|.++ 
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~-------~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD------KGAYLEAGDLWLCLSVDANVG-------PAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC------CceEEecCCEEEEEecCCCCC-------CCCCeeeEEEEeCH
Confidence            57899999999999999999999999876543      235566666665554322211       1134589999984 


Q ss_pred             -CHHHHHHHHHHCCCeEeccC-CCceEEEEECCCCCeEEEEee
Q 032146          104 -DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       104 -d~~~~~~~l~~~G~~~~~~~-~g~~~~~~~DpdG~~ie~~~~  144 (146)
                       |+++++++|+++|+++...+ ...+.+|+.|||||+|||+..
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~~~~~~~f~DPdG~~ie~~~~  110 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTSEGDSFYFLDPDGHKLELHVG  110 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCCCccEEEEECCCCCEEEEEeC
Confidence             89999999999999876543 346799999999999999864

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.83  E-value=2.4e-19  Score=112.63  Aligned_cols=108  Identities=21%  Similarity=0.312  Sum_probs=80.8

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEe
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  102 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v  102 (146)
                      +.+|+|+.|.|+|++++++||+++||++......      ..+++..++...+++.......        .+..|++|.+
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~v   66 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD------GIVYLRATGSEHHILRLRRSDR--------NRLDVVSFSV   66 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC------CEEEEECCCCccEEEEeccCCC--------CCCceEEEEe
Confidence            4689999999999999999999999999875432      2456654443333333221111        2357999999


Q ss_pred             C---CHHHHHHHHHHCCCeEeccC------CCceEEEEECCCCCeEEEEee
Q 032146          103 R---DVSKLKMILDKAGISYTLSK------SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       103 ~---d~~~~~~~l~~~G~~~~~~~------~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +   ++++++++|+++|+++..++      ++.+.+++.||+||.|||+..
T Consensus        67 ~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  117 (120)
T cd08362          67 ASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSAD  117 (120)
T ss_pred             CCHHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEec
Confidence            4   78999999999999986532      357889999999999999874

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.83  E-value=1.9e-19  Score=111.96  Aligned_cols=105  Identities=23%  Similarity=0.397  Sum_probs=80.7

Q ss_pred             eEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeC--CH
Q 032146           28 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--DV  105 (146)
Q Consensus        28 hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~--d~  105 (146)
                      |+.|.|+|++++++||+++||++.....+      ..+++..++..+.+...+....      ...+..|++|.|+  |+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~------~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS------KEAYFELAGLWICLMEEDSLQG------PERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC------ceeEEEecCeEEEeccCCCcCC------CCCCccEEEEEcCHHHH
Confidence            78999999999999999999999876542      2456666766666554332111      1234589999995  79


Q ss_pred             HHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEee
Q 032146          106 SKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       106 ~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++++++++++|+++....    .+++.+|++|||||+||+..-
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRVQGEGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHHHHcCCccCCCccccCCCceEEEEECCCCCEEEEEeC
Confidence            999999999999986431    357899999999999999864

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.83  E-value=8.2e-19  Score=110.26  Aligned_cols=113  Identities=19%  Similarity=0.175  Sum_probs=84.1

Q ss_pred             EEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCCHHHH
Q 032146           29 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  108 (146)
Q Consensus        29 v~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d~~~~  108 (146)
                      +.|.|+|++++++||+++||++..............+.+..++..+.+........  .......+..|++|.|+|++++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~v~d~~~~   82 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGDSVLMLADEFPEHG--SPASWGGTPVSLHLYVEDVDAT   82 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECCEEEEEecCCcccC--CCCCCCCceEEEEEEeCCHHHH
Confidence            56889999999999999999998875543333334455667777777764332211  1112234457999999999999


Q ss_pred             HHHHHHCCCeEecc----CCCceEEEEECCCCCeEEEEe
Q 032146          109 KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       109 ~~~l~~~G~~~~~~----~~g~~~~~~~DpdG~~ie~~~  143 (146)
                      ++++.+.|+++..+    ..+.+.++++|||||+|+|.+
T Consensus        83 ~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          83 FARAVAAGATSVMPPADQFWGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHHCCCeEecCcccccccceEEEEECCCCCEEEEec
Confidence            99999999987643    356789999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.83  E-value=7.5e-19  Score=112.49  Aligned_cols=113  Identities=25%  Similarity=0.363  Sum_probs=83.1

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeC---CeEEEEEeeCCCCCCCCCCCCCCCccEEEEE
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  101 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~  101 (146)
                      +|+|++|.|+|++++++||+++||+++....+.    ...+++..+   +..+.++.......    +....+..|++|.
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~h~~f~   72 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL----GGLVFLSRDPDEHHQIALITGRPAAP----PPGPAGLNHIAFE   72 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC----CcEEEEEecCCCceEEEEEecCCCCC----CCCCCCceEEEEE
Confidence            479999999999999999999999998765432    134556554   23566654433211    1223456899999


Q ss_pred             eCCHH---HHHHHHHHCCCeEeccC--CCceEEEEECCCCCeEEEEeec
Q 032146          102 IRDVS---KLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       102 v~d~~---~~~~~l~~~G~~~~~~~--~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |+|++   +++++|.+.|+++....  .+.+.++++||+||+|||++..
T Consensus        73 v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  121 (134)
T cd08348          73 VDSLDDLRDLYERLRAAGITPVWPVDHGNAWSIYFRDPDGNRLELFVDT  121 (134)
T ss_pred             eCCHHHHHHHHHHHHHCCCCccccCCCCceeEEEEECCCCCEEEEEEcC
Confidence            98655   57899999999876532  3468899999999999999754

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.83  E-value=3.5e-19  Score=112.38  Aligned_cols=108  Identities=16%  Similarity=0.185  Sum_probs=78.8

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeC-C-eEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-A-EMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~-~-~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      +.+++|+.|.|+|++++++||+++|||++....+.     ..+++... + ....+......         ..+..|++|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~---------~~~~~hiaf   67 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDDQ-----GRVYLKAWDEFDHHSIVLREAD---------TAGLDFMGF   67 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecCC-----ceEEEEccCCCcccEEEeccCC---------CCCeeEEEE
Confidence            57899999999999999999999999998765321     12445432 1 11112111111         123689999


Q ss_pred             EeC---CHHHHHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEee
Q 032146          101 AIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       101 ~v~---d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      .++   |+++++++|+++|+++...+     ..++.+|++|||||+||+.+.
T Consensus        68 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  119 (122)
T cd07265          68 KVLDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYAD  119 (122)
T ss_pred             EeCCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEe
Confidence            997   89999999999999986432     235789999999999999875

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.83  E-value=6e-19  Score=111.80  Aligned_cols=110  Identities=14%  Similarity=0.160  Sum_probs=77.4

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCC-----------CCceEEEEEe----CCeEEEEEeeCCCCCCCCCC
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----------LPYRGAWLWV----GAEMIHLMELPNPDPLSGRP   89 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~-----------~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~   89 (146)
                      ++.|++|.|+|+++|++||+++|||++..+...+.           .....+++..    .+..++|........    .
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~----~   77 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGD----Y   77 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCC----C
Confidence            57899999999999999999999999876553332           1112233433    234666765333221    1


Q ss_pred             CCCCCccEEEEEeCCHHHHHHHHHHCCCeEeccCCCceEEEEECCCCCeEEEEe
Q 032146           90 EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus        90 ~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DpdG~~ie~~~  143 (146)
                      ..+.  .|++|.|++. ++.++|+++|+++...+.+  .++++||||++|||+-
T Consensus        78 ~~g~--~~~hlav~~~-d~~~~l~~~Gv~~~~~~~~--~~fi~DPDG~~ie~~~  126 (127)
T cd08358          78 ELGN--DFLGITIHSK-QAVSNAKKHNWPVTEVEDG--VYEVKAPGGYKFYLID  126 (127)
T ss_pred             CCCC--CEEEEEEECH-HHHHHHHHCCCceecCCCC--EEEEECCCCCEEEEec
Confidence            2222  3788888777 5559999999998876543  8999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.83  E-value=1.1e-19  Score=119.27  Aligned_cols=114  Identities=14%  Similarity=0.124  Sum_probs=79.1

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCC-CCCceEEEEEeCCe--EEEEEeeCCCCCCCCCCCCCCCccEEEEE
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA  101 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hl~~~  101 (146)
                      +|+||+|.|+|++++++||+++||+++......+ ......+|+..++.  .+......   .   ......+..|+||.
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---l---~~~~~~g~~Hiaf~   74 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLA---L---AQGPESGVHHAAFE   74 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHH---H---hcCCCCceeEEEEE
Confidence            4789999999999999999999999987543222 12234566665432  11100000   0   00113567999999


Q ss_pred             eCCHHHHH---HHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEee
Q 032146          102 IRDVSKLK---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       102 v~d~~~~~---~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      |+|++++.   ++|+++|+++...+     .....+|+.|||||+||+...
T Consensus        75 v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~  125 (153)
T cd07257          75 VHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTD  125 (153)
T ss_pred             cCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcC
Confidence            99999986   99999999987543     123467999999999999853

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.83  E-value=5.6e-19  Score=113.34  Aligned_cols=107  Identities=20%  Similarity=0.338  Sum_probs=79.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC----eEEEEEeeCCCCCCCCCCCCCCCccEEE
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTC   99 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hl~   99 (146)
                      .+++|++|.|+|++++++||+++||+++.....  .   ..+|+..++    ..+.+...+.         ...+..|++
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~~~~~i~l~~~~~---------~~~g~~hia   67 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGGDHHNLFLIKTPA---------PMAGFHHAA   67 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCCCCcEEEEecCCC---------CCCcceEEE
Confidence            478999999999999999999999999876532  1   346666542    2444433221         124579999


Q ss_pred             EEeCCHHHHH---HHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEee
Q 032146          100 IAIRDVSKLK---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       100 ~~v~d~~~~~---~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      |.|+|++++.   ++|+++|+++...+     .+.+.+|++||+||+|||...
T Consensus        68 f~v~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~  120 (134)
T cd08360          68 FEVGDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGAD  120 (134)
T ss_pred             EEeCCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcc
Confidence            9999887775   59999999976432     234668999999999999853

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.83  E-value=5.7e-19  Score=110.27  Aligned_cols=107  Identities=21%  Similarity=0.302  Sum_probs=82.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeC-CeEEEEEeeCCCCCCCCCCCCCCCccEEEEEe
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  102 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v  102 (146)
                      .+++|+.|.|+|++++++||+++||+++.....      ..+|+..+ +..+.+.......         .+..|++|.|
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~~h~~~~v   65 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSEDDHHSLVLTEGDE---------PGVDALGFEV   65 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCCCCcEEEEEEeCCC---------CCceeEEEEc
Confidence            368999999999999999999999999987542      34677765 3433333222111         2358999999


Q ss_pred             C---CHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeec
Q 032146          103 R---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       103 ~---d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      +   ++++++++|+++|+++...+    .+.+.+++.||+||++|+....
T Consensus        66 ~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  115 (117)
T cd07240          66 ASEEDLEALAAHLEAAGVAPEEASDPEPGVGRGLRFQDPDGHLLELFVEA  115 (117)
T ss_pred             CCHHHHHHHHHHHHHcCCceEEcCccCCCCceEEEEECCCCCEEEEEEcc
Confidence            8   68999999999999986543    4568999999999999998653

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.83  E-value=3.9e-19  Score=116.73  Aligned_cols=111  Identities=17%  Similarity=0.288  Sum_probs=80.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCC---CCCceEEEEEeCCe--EEEEEeeCCCCCCCCCCCCCCCccEE
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHD---KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHT   98 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~---~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hl   98 (146)
                      .+|+||+|.|+|++++++||+++||+++.......   ......+|+..++.  .+.+....          ...+..|+
T Consensus         8 ~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~----------~~~g~~Hi   77 (154)
T cd07237           8 QGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEGP----------GPKRIHHL   77 (154)
T ss_pred             CccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcCC----------CCceeEEE
Confidence            57999999999999999999999999986542211   11224556655432  23332211          12447899


Q ss_pred             EEEeCCHH---HHHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEee
Q 032146           99 CIAIRDVS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        99 ~~~v~d~~---~~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +|.|+|++   +++++|+++|+++...+     .+.+.+|++||+||.|||...
T Consensus        78 af~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~  131 (154)
T cd07237          78 MLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWG  131 (154)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccC
Confidence            99998654   68999999999986543     356889999999999999764

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.83  E-value=7.6e-19  Score=110.21  Aligned_cols=109  Identities=17%  Similarity=0.168  Sum_probs=78.4

Q ss_pred             eEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC--eEEEEEeeCCCCCC-CCCCCCCCCccEEEEEeCC
Q 032146           28 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPL-SGRPEHGGRDRHTCIAIRD  104 (146)
Q Consensus        28 hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~-~~~~~~~~~~~hl~~~v~d  104 (146)
                      +++|.|+|++++++||+++|||+.....+      ..+.+..++  ..+.+........+ ...+..+.+ .|++|.|+|
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~-~~~~~~v~d   76 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD------WYVSLRSPDGGVELAFMLPGHETVPAAQYQFQGQG-LILNFEVDD   76 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC------cEEEEecCCCceEEEEccCCCCCCcchhcccCCce-EEEEEEECC
Confidence            47899999999999999999999886522      123344443  35555443322211 011222333 599999999


Q ss_pred             HHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEe
Q 032146          105 VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       105 ~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~  143 (146)
                      ++++++++.++|+++..++    .|.+.++++|||||+|||+|
T Consensus        77 id~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          77 VDAEYERLKAEGLPIVLPLRDEPWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             HHHHHHHHHhcCCCeeeccccCCCcceEEEEECCCCCEEEEEC
Confidence            9999999999999875432    46689999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PRK06724 hypothetical protein; Provisional

Probab=99.82  E-value=5.2e-19  Score=112.69  Aligned_cols=108  Identities=21%  Similarity=0.267  Sum_probs=75.2

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhc---CCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEE
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNIL---GLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   98 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~l---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl   98 (146)
                      +..+++||.|.|+|++++++||+++|   |++....          +.+..+...+.|.......     + ...+..|+
T Consensus         4 ~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~----------~~~~~g~~~l~l~~~~~~~-----~-~~~g~~h~   67 (128)
T PRK06724          4 LRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNE----------VAYSTGESEIYFKEVDEEI-----V-RTLGPRHI   67 (128)
T ss_pred             cCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeee----------EeeeCCCeeEEEecCCccc-----c-CCCCceeE
Confidence            35679999999999999999999977   5553311          0111233344443322110     1 12346899


Q ss_pred             EEEe---CCHHHHHHHHHHCCCeEeccC-------CCceEEEEECCCCCeEEEEeec
Q 032146           99 CIAI---RDVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        99 ~~~v---~d~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      ||.|   +++|+++++|+++|+++...+       +|.+.++++|||||.||+...+
T Consensus        68 af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         68 CYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             EEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            9998   589999999999999985432       2347889999999999998654

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=1.2e-18  Score=110.12  Aligned_cols=115  Identities=17%  Similarity=0.183  Sum_probs=79.5

Q ss_pred             eeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCC--CC----CCCCCCCCCccEEE
Q 032146           26 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD--PL----SGRPEHGGRDRHTC   99 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~----~~~~~~~~~~~hl~   99 (146)
                      +.|+.|.|+|++++++||+++||++........    ....+..++..+.+.......  ..    ...+....+..|++
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHESG----DYGELETGETTLAFASHDLAESNLKGGFVKADPAQPPAGFEIA   76 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecCCC----cEEEecCCcEEEEEEcccccccccccCccCCccccCCCcEEEE
Confidence            468999999999999999999999986532211    112233345555444332110  00    01111222336899


Q ss_pred             EEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEee
Q 032146          100 IAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       100 ~~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      |.|+|+++++++++++|+.+..++    .|.+.++++|||||.||+.++
T Consensus        77 ~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          77 FVTDDVAAAFARAVEAGAVLVSEPKEKPWGQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEcCCHHHHHHHHHHcCCEeccCCccCCCCcEEEEEECCCCCEEEEecC
Confidence            999999999999999999885432    466889999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.82  E-value=2.4e-20  Score=117.77  Aligned_cols=117  Identities=25%  Similarity=0.441  Sum_probs=84.7

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccC--CCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCC-CCCccEEEEE
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARP--HDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEH-GGRDRHTCIA  101 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~hl~~~  101 (146)
                      +|+||+|.|+|++++++||+++||+++.....  .........++..+...+.+............... .....|+++.
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~   80 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEGHIELFLNPSPPPRASGHSFPEHGGHHIAFL   80 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSSCEEEEEEESSSSSSEEEHHHSHTSEEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccccceeeeeeccccccccccccccccceeEEEE
Confidence            68999999999999999999999999987655  12223345666667777777776655443211100 0134677777


Q ss_pred             eC---CHHHHHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEE
Q 032146          102 IR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEF  141 (146)
Q Consensus       102 v~---d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~  141 (146)
                      +.   |+++++++|++.|+++...+     .....+|++||+||.|||
T Consensus        81 ~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   81 AFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             ESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             eccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            76   77888999999999987653     234556899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.82  E-value=1.2e-18  Score=115.17  Aligned_cols=112  Identities=21%  Similarity=0.324  Sum_probs=75.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  103 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~  103 (146)
                      .+|+||+|.|+|++++++||+++|||++..............|+..++....+.....         .+.+..|++|.|+
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~~~~i~l~~~---------~~~~~~Hiaf~v~   72 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGGVHDTALTGG---------NGPRLHHVAFWVP   72 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCCcceEEEecC---------CCCceeEEEEEcC
Confidence            4689999999999999999999999998653322222222344544322111111111         1134689999998


Q ss_pred             C---HHHHHHHHHHCCCeE--eccC-----CCceEEEEECCCCCeEEEEee
Q 032146          104 D---VSKLKMILDKAGISY--TLSK-----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       104 d---~~~~~~~l~~~G~~~--~~~~-----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      |   +++++++|+++|+..  ...+     .+.+.+|++|||||+||+++.
T Consensus        73 ~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~  123 (161)
T cd07256          73 EPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTG  123 (161)
T ss_pred             CHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeec
Confidence            5   778889999999863  2221     234679999999999999864

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.81  E-value=1.5e-18  Score=109.27  Aligned_cols=103  Identities=25%  Similarity=0.383  Sum_probs=78.8

Q ss_pred             EEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCCHHHH
Q 032146           29 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  108 (146)
Q Consensus        29 v~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d~~~~  108 (146)
                      ..|.|+|++++++||++ |||+...+.+.     ..+++..++..++|.......+     .  ....|++|.|+|++++
T Consensus         6 ~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~-----~~~~~~~~~~~l~l~~~~~~~~-----~--~~~~~~~~~v~dvd~~   72 (120)
T cd08350           6 PNLPSRDLDATEAFYAR-LGFSVGYRQAA-----GYMILRRGDLELHFFAHPDLDP-----A--TSPFGCCLRLPDVAAL   72 (120)
T ss_pred             ceeEcCCHHHHHHHHHH-cCCEEEecCCC-----CEEEEEcCCEEEEEEecCcCCC-----C--CCcceEEEEeCCHHHH
Confidence            67999999999999999 99998765432     2345666777888876432111     1  1236799999999999


Q ss_pred             HHHHHHCCCeEe-------cc----CCCceEEEEECCCCCeEEEEee
Q 032146          109 KMILDKAGISYT-------LS----KSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       109 ~~~l~~~G~~~~-------~~----~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +++|+++|+.+.       ..    ++|.+.++++|||||+|||.|.
T Consensus        73 ~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          73 HAEFRAAGLPETGSGIPRITPPEDQPWGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHhCccccccCCCcccCCcCCCCceeEEEEECCCCCEEEeecC
Confidence            999999999742       11    2578899999999999999884

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=1.3e-18  Score=110.11  Aligned_cols=113  Identities=18%  Similarity=0.141  Sum_probs=78.4

Q ss_pred             eeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeC-CeEEEEEeeCCCC---CCCCCCCCCCCccEEEEE
Q 032146           26 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPD---PLSGRPEHGGRDRHTCIA  101 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~---~~~~~~~~~~~~~hl~~~  101 (146)
                      +.+++|.|+|++++++||++ |||+.........    .+++..+ +..+.|.......   ..........+..|++|.
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~----~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~f~   75 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK----AACMVISDNIFVMLLTEDFFQTFTPKPIADTKKSTEVLISLS   75 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCCC----eEEEEECCceEEEEEcHHHHhhccCCCcccCCCCCeEEEEEe
Confidence            35799999999999999976 8999875333221    2344444 4567666543211   000000122334799999


Q ss_pred             eC---CHHHHHHHHHHCCCeEeccC---CCceEEEEECCCCCeEEEEe
Q 032146          102 IR---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       102 v~---d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DpdG~~ie~~~  143 (146)
                      |+   ++++++++++++|+++..++   ++.+.+|++|||||+||++.
T Consensus        76 v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          76 ADSREEVDELVEKALAAGGKEFREPQDHGFMYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             CCCHHHHHHHHHHHHHCCCcccCCcccCCceEEEEEECCCCCEEEEEE
Confidence            98   58899999999999987543   34568899999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.81  E-value=3.3e-18  Score=109.30  Aligned_cols=108  Identities=19%  Similarity=0.324  Sum_probs=79.6

Q ss_pred             eeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe--EEEEEeeCCCCCCCCCCCCCCCccEEEEEeCC
Q 032146           27 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  104 (146)
Q Consensus        27 ~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d  104 (146)
                      +||+|.|+|++++++||+++||+++......+ .....+|+..++.  .+.+....  .        ..+..|++|.|+|
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~--~--------~~~~~hl~~~v~d   69 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDEDHHDLALFPGP--E--------RPGLHHVAFEVES   69 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCCcceEEEEcCC--C--------CCCeeEEEEEcCC
Confidence            58999999999999999999999987654322 2234566666543  33333311  1        2346899999997


Q ss_pred             HH---HHHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEeec
Q 032146          105 VS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       105 ~~---~~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      ++   +++++|+++|+++...+     .+.+.++++|||||+|||.+..
T Consensus        70 ~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~  118 (131)
T cd08343          70 LDDILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEM  118 (131)
T ss_pred             HHHHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCC
Confidence            64   78899999999986532     2357889999999999998753

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=3e-18  Score=108.19  Aligned_cols=111  Identities=22%  Similarity=0.297  Sum_probs=74.5

Q ss_pred             eEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCC--CCC-CCCCCCccEEEE--Ee
Q 032146           28 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL--SGR-PEHGGRDRHTCI--AI  102 (146)
Q Consensus        28 hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~-~~~~~~~~hl~~--~v  102 (146)
                      ||+|.|+|++++++||+++||+++.....      ..+.+..++..+.+.........  ... .....+..|+++  .+
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~   75 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE------TWVDFDFFGHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLILSE   75 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC------CcccccccCcEEEEEeccCCCcccccCCCCCCccCCceEEEEEeH
Confidence            89999999999999999999999865422      11223334444444332221110  001 111223467765  45


Q ss_pred             CCHHHHHHHHHHCCCeEeccC--------CCceEEEEECCCCCeEEEEee
Q 032146          103 RDVSKLKMILDKAGISYTLSK--------SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       103 ~d~~~~~~~l~~~G~~~~~~~--------~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +|+++++++|+++|+++..++        .+.+.+|++|||||+|||..+
T Consensus        76 ~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  125 (125)
T cd08357          76 EEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKAF  125 (125)
T ss_pred             HHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEeeC
Confidence            699999999999999987432        235889999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=5.3e-18  Score=106.60  Aligned_cols=114  Identities=26%  Similarity=0.497  Sum_probs=82.7

Q ss_pred             eeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC-eEEEEEeeCCCCCC-C-CCCCCCCCccEEEEEe
Q 032146           26 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPL-S-GRPEHGGRDRHTCIAI  102 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~-~-~~~~~~~~~~hl~~~v  102 (146)
                      +.++.|.|.|++++++||+++|||++..... .    ..+++..++ ..+.++........ . ..+....+..|++|.+
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~~-~----~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v   75 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKED-R----RLAFFWVGGRGMLLLFDPGATSTPGGEIPPHGGSGPGHFAFAI   75 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecCC-C----ceEEEEcCCCcEEEEEecCCcccccCCCCCCCCCCccEEEEEc
Confidence            3579999999999999999999999886411 1    235666665 45555554322110 0 0111234568999999


Q ss_pred             C--CHHHHHHHHHHCCCeEeccC---CCceEEEEECCCCCeEEEEee
Q 032146          103 R--DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       103 ~--d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +  |++++++++.++|+.+....   .+++.++++|||||+||+++.
T Consensus        76 ~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          76 PAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             CHHHHHHHHHHHHhcCCceeccccCCCCeeEEEEECCCCCEEEEecC
Confidence            5  89999999999999876543   467899999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.80  E-value=4.4e-18  Score=110.52  Aligned_cols=106  Identities=17%  Similarity=0.316  Sum_probs=78.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe--EEEEEeeCCCCCCCCCCCCCCCccEEEEE
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA  101 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hl~~~  101 (146)
                      .+++|+.|.|+|++++++||+++|||++.....     ...+|+..++.  .+.+...  .         ..+..|++|.
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~-----~~~~~l~~~~~~~~~~l~~~--~---------~~~~~hiaf~   66 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG-----DQMAFLRCNSDHHSIAIARG--P---------HPSLNHVAFE   66 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC-----CeEEEEECCCCcceEEEccC--C---------CCceEEEEEE
Confidence            378999999999999999999999999865322     12356665543  3333211  0         1346899999


Q ss_pred             eCCHHHHH---HHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEeec
Q 032146          102 IRDVSKLK---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       102 v~d~~~~~---~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |+|++++.   ++|+++|+++...+     .+.+.+|++||+||.|||++..
T Consensus        67 v~d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~  118 (144)
T cd07239          67 MPSIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSEL  118 (144)
T ss_pred             CCCHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCc
Confidence            99877774   89999999986432     2346689999999999998753

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.80  E-value=5.1e-18  Score=106.93  Aligned_cols=113  Identities=20%  Similarity=0.306  Sum_probs=77.4

Q ss_pred             eeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeC-CeEEEEEeeCCCCC-CCCCCCCCCCccEEEEEeC
Q 032146           26 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDP-LSGRPEHGGRDRHTCIAIR  103 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~-~~~~~~~~~~~~hl~~~v~  103 (146)
                      |+||+|.|+|++++++||++ |||++.......    ..+.+..+ +..+.+........ ....+....+..|++|.++
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~~----~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~   75 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADDE----PHVEAVLPGGVRLAWDTVESIRSFTPGWTPTGGHRIALAFLCE   75 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCCC----CcEEEEeCCCEEEEEEcccceeeecCCCCCCCCCcEEEEEEcC
Confidence            57999999999999999975 999986543211    22445554 45555543321110 0011112233478999875


Q ss_pred             ---CHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEe
Q 032146          104 ---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       104 ---d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~  143 (146)
                         |+++++++|+++|+++..++    .|.+.++++|||||+|||+.
T Consensus        76 ~~~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~  122 (122)
T cd07235          76 TPAEVDALYAELVGAGYPGHKEPWDAPWGQRYAIVKDPDGNLVDLFA  122 (122)
T ss_pred             CHHHHHHHHHHHHHCCCCcCCCCccCCCCCEEEEEECCCCCEEEEeC
Confidence               89999999999999876433    46688999999999999973

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.80  E-value=6.9e-18  Score=104.49  Aligned_cols=106  Identities=30%  Similarity=0.459  Sum_probs=80.0

Q ss_pred             EEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCCHHHH
Q 032146           29 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  108 (146)
Q Consensus        29 v~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d~~~~  108 (146)
                      ..|.|+|++++++||+++||+++......    ...+++..++..++|.........     ...+..|++|.++|++++
T Consensus         2 ~~i~v~d~~~s~~FY~~~lg~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~   72 (112)
T cd08349           2 PVLPVSDIERSLAFYRDVLGFEVDWEHPE----PGYAFLSRGGAQLMLSEHDGDEPV-----PLGRGGSVYIEVEDVDAL   72 (112)
T ss_pred             CEEEECCHHHHHHHHHhccCeEEEEEcCC----CcEEEEEeCCEEEEEeccCCCCCC-----CCCCcEEEEEEeCCHHHH
Confidence            36899999999999999999998775431    133556667777777654432211     223346899999999999


Q ss_pred             HHHHHHCCCe-Eecc----CCCceEEEEECCCCCeEEEEe
Q 032146          109 KMILDKAGIS-YTLS----KSGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       109 ~~~l~~~G~~-~~~~----~~g~~~~~~~DpdG~~ie~~~  143 (146)
                      ++++.++|+. +..+    ..+.+.++++||+||.|||+|
T Consensus        73 ~~~l~~~G~~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          73 YAELKAKGADLIVYPPEDQPWGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHHcCCcceecCccCCCcccEEEEEECCCCCEEEecC
Confidence            9999999998 4332    245688999999999999986

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=1.1e-17  Score=105.11  Aligned_cols=107  Identities=22%  Similarity=0.388  Sum_probs=76.4

Q ss_pred             eeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCC--
Q 032146           27 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD--  104 (146)
Q Consensus        27 ~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d--  104 (146)
                      .|+.|.|+|++++++||+++||++...+.+  .   ... +..++..+.+........    +.  .+..|++|.+++  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~--~---~~~-~~~~~~~~~~~~~~~~~~----~~--~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD--D---YAK-FLLEDPRLNFVLNERPGA----PG--GGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC--C---eeE-EEecCCceEEEEecCCCC----CC--CCeeEEEEEeCCHH
Confidence            489999999999999999999998866432  1   122 233333333333222111    01  346899999986  


Q ss_pred             -HHHHHHHHHHCCCeEeccCC------CceEEEEECCCCCeEEEEeec
Q 032146          105 -VSKLKMILDKAGISYTLSKS------GRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       105 -~~~~~~~l~~~G~~~~~~~~------g~~~~~~~DpdG~~ie~~~~~  145 (146)
                       +++++++|.++|+++...+.      +.+.+|++||+||+|||+.+.
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             88899999999999865431      246799999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.80  E-value=4.3e-18  Score=107.12  Aligned_cols=107  Identities=23%  Similarity=0.311  Sum_probs=78.3

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeC--CeEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      +.++.|+.|.|+|++++++||+++||+++....+      ..+|+...  .....+......         ..+..|++|
T Consensus         2 ~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~~~hi~~   66 (121)
T cd07266           2 ILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD------DRIYLRGLEEFIHHSLVLTKAP---------VAGLGHIAF   66 (121)
T ss_pred             cceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC------CeEEEEecCCCceEEEEEeeCC---------CCceeEEEE
Confidence            5789999999999999999999999999876432      23455431  122222221111         123689999


Q ss_pred             EeC---CHHHHHHHHHHCCCeEecc----C-CCceEEEEECCCCCeEEEEee
Q 032146          101 AIR---DVSKLKMILDKAGISYTLS----K-SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       101 ~v~---d~~~~~~~l~~~G~~~~~~----~-~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      .++   |+++++++++++|+++...    . ...+.+|+.|||||+||++..
T Consensus        67 ~v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          67 RVRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             ECCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence            994   8999999999999998543    1 235789999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.79  E-value=5.9e-18  Score=104.31  Aligned_cols=100  Identities=27%  Similarity=0.509  Sum_probs=72.3

Q ss_pred             EEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe----EEEEEeeCCCCCCCCCCCCCCCccEEEEEeCCHH
Q 032146           31 ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS  106 (146)
Q Consensus        31 l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d~~  106 (146)
                      |.|+|++++++||+++|||++....+      ..+.+..+..    ...+...+...      ....+..|++|.|+|++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~v~dv~   68 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP------DYVDFSLGFRFHDGVIEFLQFPDPP------GPPGGGFHLCFEVEDVD   68 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET------SEEEEEETEEEEEEEEEEEEEESSS------SSSSSEEEEEEEESHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC------CeEEEEeccchhhhhHHHccCCccc------cCCCceeEEEEEEcCHH
Confidence            68999999999999999999998433      2233444321    23333332211      11244689999999999


Q ss_pred             HHHHHHHHCCCeEecc----CCCceEEEEECCCCCeEEEE
Q 032146          107 KLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  142 (146)
Q Consensus       107 ~~~~~l~~~G~~~~~~----~~g~~~~~~~DpdG~~ie~~  142 (146)
                      +++++++++|+++..+    +.|.+.+++.|||||+|||+
T Consensus        69 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   69 ALYERLKELGAEIVTEPRDDPWGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHHHHHTTSEEEEEEEEETTSEEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHCCCeEeeCCEEcCCCeEEEEEECCCCCEEEeC
Confidence            9999999999997543    35679999999999999986

...

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=5.1e-18  Score=105.90  Aligned_cols=100  Identities=18%  Similarity=0.213  Sum_probs=76.0

Q ss_pred             EEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCCHHHH
Q 032146           29 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  108 (146)
Q Consensus        29 v~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d~~~~  108 (146)
                      ..|.|+|++++++||++ |||++....+      ..+++..++..+.|........        ....+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~--------~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND------NLAYFRLGNCAFYLQDYYVKDW--------AENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC------CEEEEEcCCEEEEeecCCCccc--------ccCCEEEEEECCHHHH
Confidence            46889999999999988 9999987532      3466777777766644221111        1136799999999999


Q ss_pred             HHHHHHCCCeEe---------ccCCCceEEEEECCCCCeEEEEe
Q 032146          109 KMILDKAGISYT---------LSKSGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       109 ~~~l~~~G~~~~---------~~~~g~~~~~~~DpdG~~ie~~~  143 (146)
                      +++|+++|+++.         ..++|.+.++++|||||+|+|.|
T Consensus        70 ~~~l~~~G~~~~~~~~~~~~~~~~~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHIKALGLPKKFPGVKLPPITQPWWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHHcCCcccccceecCccccCCCcEEEEEECCCccEEEeeC
Confidence            999999998642         12357899999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=1.6e-17  Score=103.49  Aligned_cols=106  Identities=22%  Similarity=0.264  Sum_probs=77.8

Q ss_pred             EEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCC---
Q 032146           29 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---  104 (146)
Q Consensus        29 v~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d---  104 (146)
                      +.|.|+|++++++||+++||+++....+      ..+.+.. ++..+.++.......   .+....+..|++|.+++   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSP------TFALFVLGSGVKLGLWSRHTVEP---ASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCC------ceEEEEeCCCcEEEEeeccccCC---CCCCCCCceEEEEEcCCHHH
Confidence            5789999999999999999999876432      1233444 456777766443221   11122345899999985   


Q ss_pred             HHHHHHHHHHCCCeEeccC---CCceEEEEECCCCCeEEEEe
Q 032146          105 VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       105 ~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DpdG~~ie~~~  143 (146)
                      ++++++++.++|+++..++   +.++.++++|||||+|||+.
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~g~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDFGYTFVALDPDGHRLRVFA  114 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCCccEEEEECCCCCEEEeeC
Confidence            8889999999999987643   33478999999999999963

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=1.7e-17  Score=103.05  Aligned_cols=101  Identities=18%  Similarity=0.175  Sum_probs=74.4

Q ss_pred             EEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeC---CeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCCH
Q 032146           29 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  105 (146)
Q Consensus        29 v~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d~  105 (146)
                      ..|.|+|++++++||+++|||+......      ..+++..+   +..+.+.......         ....|++|.|+|+
T Consensus         4 ~~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~i~~~v~d~   68 (112)
T cd07238           4 PNLPVADPEAAAAFYADVLGLDVVMDHG------WIATFASPQNMTVQVSLATEGGTA---------TVVPDLSIEVDDV   68 (112)
T ss_pred             ceEecCCHHHHHHHHHHhcCceEEEcCC------ceEEEeecCCCCcEEEEecCCCCC---------CCCCEEEEEeCCH
Confidence            5689999999999999999999864311      22333332   2344444322111         1246999999999


Q ss_pred             HHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEee
Q 032146          106 SKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       106 ~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++++++|+++|+.+..++    +|.+.+++.||+||+|+|.++
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          69 DAALARAVAAGFAIVYGPTDEPWGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHHHHhcCCeEecCCccCCCceEEEEEECCCCCEEEEEEc
Confidence            999999999999986543    456889999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.78  E-value=1.2e-17  Score=120.65  Aligned_cols=114  Identities=21%  Similarity=0.342  Sum_probs=79.4

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCc-eEEEEEeCCeE--EEEEeeCCCCCCCCCCCCCCCc
Q 032146           19 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-RGAWLWVGAEM--IHLMELPNPDPLSGRPEHGGRD   95 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~-~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~   95 (146)
                      ..+.+.+|+||+|.|+|++++++||+++|||+............ ...|+..++..  +.+..         .+ ..+..
T Consensus       139 ~~~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-~~g~~  208 (303)
T TIGR03211       139 RGVGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNKAHDIAFVG---------DP-EPGKL  208 (303)
T ss_pred             CCcCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCCCcccceec---------CC-CCCce
Confidence            34567899999999999999999999999999865432222111 23444443221  11111         01 11336


Q ss_pred             cEEEEEeCC---HHHHHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEE
Q 032146           96 RHTCIAIRD---VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFT  142 (146)
Q Consensus        96 ~hl~~~v~d---~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~  142 (146)
                      +|+||.|+|   +++++++|+++|+++...+     ...+.+|++|||||+||+.
T Consensus       209 ~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~  263 (303)
T TIGR03211       209 HHVSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETF  263 (303)
T ss_pred             EEEEEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEe
Confidence            899999996   5557889999999986543     1357899999999999997

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.78  E-value=1.1e-17  Score=108.30  Aligned_cols=104  Identities=18%  Similarity=0.268  Sum_probs=76.2

Q ss_pred             eeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC-eEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCC-
Q 032146           27 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD-  104 (146)
Q Consensus        27 ~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d-  104 (146)
                      .||.|.|+|++++++||+++|||++..+...     ..+|+...+ ...+.+...        +....+++|++|.|+| 
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~--------~~~~~gl~Hiaf~v~~~   67 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVG--------PASSSHFHHVNFMVTDI   67 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeec--------cCCCCceEEEEEECCCH
Confidence            4899999999999999999999998765321     346665432 222222211        1123568999999985 


Q ss_pred             --HHHHHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEe
Q 032146          105 --VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       105 --~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~  143 (146)
                        +++++++|+++|+++...+     .+.+.+|++||+|+.||+..
T Consensus        68 ~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~  113 (141)
T cd07258          68 DDIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSF  113 (141)
T ss_pred             HHHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEe
Confidence              4677999999999986432     35688999999999999975

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.77  E-value=1.7e-17  Score=101.68  Aligned_cols=108  Identities=30%  Similarity=0.442  Sum_probs=86.0

Q ss_pred             eEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCCHHH
Q 032146           28 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  107 (146)
Q Consensus        28 hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d~~~  107 (146)
                      |+.+.|+|++++++||+++||++.......  .....+++..++..+++.........    ....+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~~~~i~l~~~~~~~~~----~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLGGTRLELFEGDEPAPA----PSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecCCceEEEecCCCCCCc----ccCCCeeEEEEECCCHHH
Confidence            789999999999999999999998876542  12245666667778888887654321    223446899999999999


Q ss_pred             HHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEE
Q 032146          108 LKMILDKAGISYTLSK----SGRPAIFTRDPDANALEF  141 (146)
Q Consensus       108 ~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~  141 (146)
                      ++++|.++|+.+..+.    .+.+.+++.||+||.|||
T Consensus        75 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPREEPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCcCCCCCcEEEEEECCCCcEEeC
Confidence            9999999999886543    467999999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=2.6e-17  Score=103.84  Aligned_cols=107  Identities=23%  Similarity=0.319  Sum_probs=75.5

Q ss_pred             eeeEEEEeCCHHHHHHHHhhh---cCCeeccccCCCCCCceEEEEEeC--CeEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           26 VHHVGILCENLERSLEFYQNI---LGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~---lg~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      ++|++|.|+|++++++||+++   ||++...+..  .   ..+++..+  +..+.+.......     +....+..|++|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~--~---~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~hi~f   70 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDG--P---GAVGYGKGGGGPDFWVTKPFDGE-----PATAGNGTHVAF   70 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecC--C---ceeEeccCCCCceEEEeccccCC-----CCCCCCceEEEE
Confidence            579999999999999999999   6898765431  1   12333333  4466665432211     111123479999


Q ss_pred             EeCC---HHHHHHHHHHCCCeEeccC-------CCceEEEEECCCCCeEEEE
Q 032146          101 AIRD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFT  142 (146)
Q Consensus       101 ~v~d---~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DpdG~~ie~~  142 (146)
                      .|++   +++++++++++|+.+...+       .+.+.+|+.|||||+|||+
T Consensus        71 ~v~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          71 AAPSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            9986   7889999999999876432       1335789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.76  E-value=3.4e-17  Score=101.88  Aligned_cols=101  Identities=26%  Similarity=0.401  Sum_probs=71.3

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCe--EEEEEeeCCCCCCCCCCCCCCCccEE--E
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAE--MIHLMELPNPDPLSGRPEHGGRDRHT--C   99 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~--~~~l~~~~~~~~~~~~~~~~~~~~hl--~   99 (146)
                      +|+||.|.|+|++++++||+ .|||++..+.+       ..++.. ++.  ++.+....  .         ....|+  +
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~~   62 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEGD-------GLELRTAGNDHRWARLLEGA--R---------KRLAYLSFG   62 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeecC-------ceEEEecCCCceEEEeecCC--C---------CceeeEEEE
Confidence            68999999999999999997 69999865421       122322 222  33332211  0         123444  4


Q ss_pred             EEeCCHHHHHHHHHHCCCeEeccC--CCceEEEEECCCCCeEEEEee
Q 032146          100 IAIRDVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       100 ~~v~d~~~~~~~l~~~G~~~~~~~--~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +.++|+++++++|+++|+++...+  .+.+.+|+.|||||+|||...
T Consensus        63 ~~~~d~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          63 IFEDDFAAFARHLEAAGVALAAAPPGADPDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             eEhhhHHHHHHHHHHcCCceecCCCcCCCCEEEEECCCCCEEEEecC
Confidence            445799999999999999986543  345679999999999999854

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=6.6e-17  Score=101.38  Aligned_cols=110  Identities=20%  Similarity=0.269  Sum_probs=78.8

Q ss_pred             EEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCC--CCCCCccEEEEEe---C
Q 032146           29 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP--EHGGRDRHTCIAI---R  103 (146)
Q Consensus        29 v~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~hl~~~v---~  103 (146)
                      |.|.|+|++++.+||+++||+++..+.. .    ...++..++..++++..+........+  ..+.+..|++|.+   +
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~~-~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADSN-D----GVAFFQLGGLVLALFPREELAKDAGVPVPPPGFSGITLAHNVRSEE   76 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccCC-C----ceEEEEcCCeEEEEecchhhhhhcCCCCCCCCccceEEEEEcCCHH
Confidence            6899999999999999999999876511 1    235566677777777644221111111  1222335677766   4


Q ss_pred             CHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEe
Q 032146          104 DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       104 d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~  143 (146)
                      |++++++++++.|+++..++    .+++.++++||+||+|||..
T Consensus        77 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          77 EVDAVLARAAAAGATIVKPPQDVFWGGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             HHHHHHHHHHhCCCEEecCCccCCCCceEEEEECCCCCEEEEee
Confidence            89999999999999986543    35789999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.75  E-value=5.5e-17  Score=116.30  Aligned_cols=108  Identities=20%  Similarity=0.269  Sum_probs=79.7

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEe
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  102 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v  102 (146)
                      |.+++|+.|.|+|++++++||+++|||+...+...     ...|+..++....+.......         .+..|++|.|
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~---------~~~~~~~f~V   66 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGEN-----DALYLRLDSRAHRIAVHPGES---------DDLAYAGWEV   66 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCCC-----ceEEEEcCCCceEEEEEECCc---------CCeeeEeeee
Confidence            46899999999999999999999999997654221     124556653322222222111         2357899999


Q ss_pred             CC---HHHHHHHHHHCCCeEeccC-------CCceEEEEECCCCCeEEEEee
Q 032146          103 RD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       103 ~d---~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++   ++++.++|+++|+++...+       .+.+.++++|||||.+|++..
T Consensus        67 ~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~  118 (286)
T TIGR03213        67 ADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYG  118 (286)
T ss_pred             CCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEc
Confidence            97   8899999999999986532       346789999999999999863

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.75  E-value=8.2e-17  Score=115.71  Aligned_cols=114  Identities=27%  Similarity=0.420  Sum_probs=78.8

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe--EEEEEeeCCCCCCCCCCCCCCCccE
Q 032146           20 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH   97 (146)
Q Consensus        20 ~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~h   97 (146)
                      .+.+.+++||+|.|+|++++++||+++||+++..............|+..++.  .+.+.           +..+.+.+|
T Consensus       131 ~~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~H  199 (294)
T TIGR02295       131 GVSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGGVHDIALT-----------NGNGPRLHH  199 (294)
T ss_pred             CccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCCcCceEee-----------cCCCCceee
Confidence            35678999999999999999999999999998754332222222344433221  11111           011245799


Q ss_pred             EEEEeCC---HHHHHHHHHHCCCe--EeccC-----CCceEEEEECCCCCeEEEEee
Q 032146           98 TCIAIRD---VSKLKMILDKAGIS--YTLSK-----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        98 l~~~v~d---~~~~~~~l~~~G~~--~~~~~-----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +||.|+|   +++++++|+++|++  +...+     .+.+.+|++||+||+||+++.
T Consensus       200 iaf~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~  256 (294)
T TIGR02295       200 IAYWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTG  256 (294)
T ss_pred             EEEEcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEec
Confidence            9999997   55668999999987  43322     134679999999999999864

The enzyme from Bacillus brevis contains manganese.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.73  E-value=1.5e-16  Score=101.41  Aligned_cols=120  Identities=18%  Similarity=0.265  Sum_probs=76.2

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCC----CCCCC-CCCccEEE
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS----GRPEH-GGRDRHTC   99 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~-~~~~~hl~   99 (146)
                      +..+..|.+++..+...||..+||++.....+.+... ..+|+......++|...-.....+    ..++. +.+.+|||
T Consensus        42 r~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~-~~v~~~~~~~~~ELthn~Gtes~~~~~~~ngN~~prGfgHIc  120 (170)
T KOG2944|consen   42 RVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHG-VSVFVFSRNAKLELTHNWGTESPPDQAYLNGNKEPRGFGHIC  120 (170)
T ss_pred             hhccceeechhhhhHhhhHHHhhcccccccCccCCCC-CceEEecccCceeeecCCCCCCCcchhhcCCCCCCCccceEE
Confidence            3334444444444444444444444433333322222 237777777777877655443332    12222 23679999


Q ss_pred             EEeCCHHHHHHHHHHCCCeEeccCCCc---eEEEEECCCCCeEEEEeec
Q 032146          100 IAIRDVSKLKMILDKAGISYTLSKSGR---PAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       100 ~~v~d~~~~~~~l~~~G~~~~~~~~g~---~~~~~~DpdG~~ie~~~~~  145 (146)
                      |.|+|+++++++|+++|+++......+   ..+|+.||||++||+....
T Consensus       121 i~V~di~sac~~lkekGV~f~Kk~~dGk~K~iaF~~dpDgywiei~~~s  169 (170)
T KOG2944|consen  121 IEVDDINSACERLKEKGVRFKKKLKDGKMKPIAFLHDPDGYWIEIELES  169 (170)
T ss_pred             EEeCCHHHHHHHHHHhCceeeecCCCccccceeEEECCCCCeEEEeecC
Confidence            999999999999999999987765443   5689999999999998653

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.73  E-value=2e-16  Score=113.46  Aligned_cols=113  Identities=15%  Similarity=0.251  Sum_probs=78.3

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCC--C-CCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEE
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPH--D-KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC   99 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~--~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~   99 (146)
                      ..+|+||+|.|+|++++++||+++|||++......  + ......+|+..++....+......        ...+.+|++
T Consensus       140 ~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~l~~~~--------~~~~~~Hia  211 (286)
T TIGR03213       140 DQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNERHHSLAFAAGP--------SEKRLNHLM  211 (286)
T ss_pred             CccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCCcceEEEecCC--------CCCceEEEE
Confidence            46899999999999999999999999998654221  1 111235666654332222111111        124578999


Q ss_pred             EEeCCHHH---HHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEe
Q 032146          100 IAIRDVSK---LKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       100 ~~v~d~~~---~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~  143 (146)
                      |.|+|.++   ++++|+++|+....+.    .+.+.+|++||+||+||+..
T Consensus       212 f~v~d~~~v~~~~~~l~~~G~~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~  262 (286)
T TIGR03213       212 LEVDTLDDVGLALDRVDADGIVASTLGRHTNDHMVSFYVATPSGWLVEYGW  262 (286)
T ss_pred             EEcCCHHHHHHHHHHHHHCCCEEecCCcCCCCCeEEEEEECCCCcEEEeec
Confidence            99997766   7999999999332221    34678999999999999975

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.73  E-value=2e-16  Score=113.72  Aligned_cols=107  Identities=21%  Similarity=0.285  Sum_probs=79.5

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeC-C-eEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-A-EMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~-~-~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      +.+++|+.|.|+|++++++||+++|||++.....      ..+++... . ....+......         ..+..|++|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~------~~~~~~~~~~~~~~~l~l~~~~---------~~~~~hiaf   66 (294)
T TIGR02295         2 ILRTGHVELRVTDLDKSREFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLTKAP---------SAALSYIGF   66 (294)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC------CeEEEeccCcCCceEEEeeeCC---------CcCccEEEE
Confidence            6789999999999999999999999999876532      23445432 1 11122211111         123689999


Q ss_pred             EeC---CHHHHHHHHHHCCCeEeccC--CCceEEEEECCCCCeEEEEee
Q 032146          101 AIR---DVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       101 ~v~---d~~~~~~~l~~~G~~~~~~~--~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      .|+   |+++++++|+++|+.+...+  .+.+.+|++|||||.|||++.
T Consensus        67 ~v~~~~dl~~~~~~l~~~Gv~v~~~~~~~~~~~~~~~DPdG~~iEl~~~  115 (294)
T TIGR02295        67 RVSKEEDLDKAADFFQKLGHPVRLVRDGGQPEALRVEDPFGYPIEFYFE  115 (294)
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEeecCCCCceEEEEECCCCCEEEEEEc
Confidence            997   78999999999999986533  346899999999999999873

The enzyme from Bacillus brevis contains manganese.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.72  E-value=2.9e-16  Score=113.37  Aligned_cols=106  Identities=21%  Similarity=0.274  Sum_probs=79.1

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-C---CeEEEEEeeCCCCCCCCCCCCCCCccEE
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-G---AEMIHLMELPNPDPLSGRPEHGGRDRHT   98 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~---~~~~~l~~~~~~~~~~~~~~~~~~~~hl   98 (146)
                      +.+++|+.|.|+|++++++||+++||+++..+...      .+++.. +   ...+.+..  .         ...+..|+
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~~------~~~~~~~~~~~~~~~~l~~--~---------~~~g~~hi   64 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDGQ------RVYLKAWDEWDHYSVILTE--A---------DTAGLDHM   64 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecCc------eEEEEeccccccceEeecc--C---------CCCceeEE
Confidence            56899999999999999999999999998765331      244443 1   11222211  1         11346899


Q ss_pred             EEEeC---CHHHHHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEeec
Q 032146           99 CIAIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        99 ~~~v~---d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      +|.|+   |+++++++|+++|+++...+     ..++.+|+.|||||.|||.+..
T Consensus        65 af~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~  119 (303)
T TIGR03211        65 AFKVESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEK  119 (303)
T ss_pred             EEEeCCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEcc
Confidence            99998   78999999999999986432     2457899999999999999743

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.71  E-value=5.5e-17  Score=100.63  Aligned_cols=93  Identities=26%  Similarity=0.397  Sum_probs=76.7

Q ss_pred             eeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC--eEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCC
Q 032146           27 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  104 (146)
Q Consensus        27 ~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d  104 (146)
                      +||++.|+|++++++||+++||++............+.+++..++  ..++|+.+.......  ...+.+++||||.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~~~~--~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDGDSPL--DRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESSTTCHH--HHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCCCccc--ccCCCCEEEEEEEeCC
Confidence            699999999999999999999998876665556667788888877  599999977754211  1266778999999999


Q ss_pred             HHHHHHHHHHCCCeEec
Q 032146          105 VSKLKMILDKAGISYTL  121 (146)
Q Consensus       105 ~~~~~~~l~~~G~~~~~  121 (146)
                      +++..++|+++|+++..
T Consensus        79 ~d~~~~~l~~~G~~~~~   95 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLD   95 (109)
T ss_dssp             HHHHHHHHHHTTECEEE
T ss_pred             HHHHHHHHHHCCCEEcc
Confidence            99999999999999764

>PLN02300 lactoylglutathione lyase

Probab=99.69  E-value=9.9e-16  Score=109.88  Aligned_cols=118  Identities=20%  Similarity=0.241  Sum_probs=85.1

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC----eEEEEEeeCCCCCCCCCCCCCCCccEEE
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTC   99 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hl~   99 (146)
                      ..+.|+.|.|+|++++.+||+++||+++......+...+..+++..++    ..+++......    ..+..+.+..|++
T Consensus       153 ~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~----~~~~~g~~~~~i~  228 (286)
T PLN02300        153 EPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGV----TEYTKGNAYAQIA  228 (286)
T ss_pred             CcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCC----CccccCCceeEEE
Confidence            468899999999999999999999999975433333334445554322    23444321111    1123345568999


Q ss_pred             EEeCCHHHHHHHHHHCCCeEeccC---CC--ceEEEEECCCCCeEEEEeec
Q 032146          100 IAIRDVSKLKMILDKAGISYTLSK---SG--RPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       100 ~~v~d~~~~~~~l~~~G~~~~~~~---~g--~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |.|+|+++.+++++++|+++..++   ++  .+.+++.|||||.++|++..
T Consensus       229 ~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~  279 (286)
T PLN02300        229 IGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNI  279 (286)
T ss_pred             EecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccc
Confidence            999999999999999999987643   22  47889999999999999864

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.63  E-value=2.7e-14  Score=89.51  Aligned_cols=115  Identities=17%  Similarity=0.147  Sum_probs=81.7

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC-eEEEEEeeCCCCCCCCCCCCCCCccEEEEE
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIA  101 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~  101 (146)
                      ...+.|..|.|.|++++++||+++||++..+......  ...+.+..++ .....+.....     .++. .....+.|.
T Consensus         7 ~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~--~~y~~f~~~~~~~gG~l~~~~~-----~~p~-~~~~~iy~~   78 (127)
T COG3324           7 KGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGE--MRYAVFPADGAGAGGGLMARPG-----SPPG-GGGWVIYFA   78 (127)
T ss_pred             CCccEEEeeecCCHHHHHHHHHHhhCceecccccCCC--ceEEEEECCCccccceeccCCc-----CCCC-CCCEEEEEe
Confidence            3568899999999999999999999999887644211  2223333332 11111111111     1111 234678999


Q ss_pred             eCCHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeec
Q 032146          102 IRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       102 v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |+|+++..+|..+.|..+..++    .+++.+.+.||+||+|-|+++.
T Consensus        79 v~did~~l~rv~~~GG~V~~p~~~~p~~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          79 VDDIDATLERVVAAGGKVLRPKTEFPGGGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             cCChHHHHHHHHhcCCeEEecccccCCceEEEEEECCCCCEEEEeecC
Confidence            9999999999999999987654    3789999999999999999875

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.62  E-value=2.4e-14  Score=99.12  Aligned_cols=114  Identities=25%  Similarity=0.377  Sum_probs=88.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe-EEEEEeeCCCCCCCCCCCCCCCccEEEEEe
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAI  102 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v  102 (146)
                      ..+..+.|.|+|++++..||++++|+++..+..      ..+-+..++. .+.|.+.++...   .+....|+.|+||.+
T Consensus         9 ~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vgg~~LL~L~q~~~a~~---~~~~~aGLyH~AfLl   79 (265)
T COG2514           9 TFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVGGTPLLTLEQFPDARR---PPPRAAGLYHTAFLL   79 (265)
T ss_pred             cEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeCCEEEEEEEeCCCCCC---CCccccceeeeeeec
Confidence            457789999999999999999999999998765      3355666766 666666554432   224456689999999


Q ss_pred             C---CHHHHHHHHHHCCCeEec--cCCCceEEEEECCCCCeEEEEeecC
Q 032146          103 R---DVSKLKMILDKAGISYTL--SKSGRPAIFTRDPDANALEFTQVDG  146 (146)
Q Consensus       103 ~---d~~~~~~~l~~~G~~~~~--~~~g~~~~~~~DpdG~~ie~~~~~~  146 (146)
                      +   |+..++.++.+.|+.+..  +..-...+|+.||+||-||++...|
T Consensus        80 P~r~~L~~~l~hl~~~~~~l~Ga~DH~vSEAlYl~DPEGNGIEiYaDrp  128 (265)
T COG2514          80 PTREDLARVLNHLAEEGIPLVGASDHLVSEALYLEDPEGNGIEIYADRP  128 (265)
T ss_pred             CCHHHHHHHHHHHHhcCCcccccCcchhheeeeecCCCCCeEEEEecCC
Confidence            9   677778888999999863  3345788999999999999987643

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.61  E-value=2e-14  Score=88.34  Aligned_cols=118  Identities=19%  Similarity=0.205  Sum_probs=85.9

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCC---CCCCCCCccEEEEE
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG---RPEHGGRDRHTCIA  101 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~hl~~~  101 (146)
                      ....|+|.|+|++++++||+. |||+.......+.   ..+.+..++..+.|........-..   .........-+||.
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~---a~~mi~~~ni~vMLL~~~~fq~F~~~~i~dt~~s~evli~ls   78 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDED---AACMIISDNIFVMLLEEARFQTFTKRQIADTTKSREVLISLS   78 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCccccc---ceeEEEeccEEEEEeccHHhhhhcccccccccCCceEEEEec
Confidence            456799999999999999977 9999887554333   3455555677777776554322111   11222334678888


Q ss_pred             eC---CHHHHHHHHHHCCCeEeccC---CCceEEEEECCCCCeEEEEeecC
Q 032146          102 IR---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVDG  146 (146)
Q Consensus       102 v~---d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DpdG~~ie~~~~~~  146 (146)
                      +.   ++|+++++.++.|.++..++   ...+...+.|||||.||+..++|
T Consensus        79 ~~s~eevd~~v~ka~eaGGk~~~~~~d~gfMYg~~fqDpDGh~wE~l~m~~  129 (133)
T COG3607          79 AGSREEVDELVDKALEAGGKPANEPQDEGFMYGRSFQDPDGHVWEFLWMDP  129 (133)
T ss_pred             cCcHHHHHHHHHHHHHcCCCCCCCccccccccceeeeCCCCCeEEEEEeCH
Confidence            87   78999999999999986554   34677889999999999998875

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.55  E-value=2.3e-13  Score=82.45  Aligned_cols=111  Identities=25%  Similarity=0.446  Sum_probs=75.1

Q ss_pred             eeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeC--CeEEEEEeeCCCCCCCCCC--CCCCCccEEEE-
Q 032146           26 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRP--EHGGRDRHTCI-  100 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~--~~~~~~~hl~~-  100 (146)
                      +-|+++.|+|+++++.||.++||++.....+        .|+.++  +.++.....+..+.....+  .++.-..|++. 
T Consensus         5 ~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd--------~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGvV   76 (138)
T COG3565           5 PFHLAIPVNDLDETRRFYGEVLGCKEGRSTD--------TWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGVV   76 (138)
T ss_pred             ceEEeeeccccHHHHhhhhhhcccccccccc--------eEEEeeecccEEEEEecCCcccccCcccCCCCCCCccceEE
Confidence            5689999999999999999999999877543        344332  3333333323222111111  12222245554 


Q ss_pred             -EeCCHHHHHHHHHHCCCeEeccC--------CCceEEEEECCCCCeEEEEee
Q 032146          101 -AIRDVSKLKMILDKAGISYTLSK--------SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       101 -~v~d~~~~~~~l~~~G~~~~~~~--------~g~~~~~~~DpdG~~ie~~~~  144 (146)
                       .++|+-++.++|.+.|+....++        ..++.+++.||.||.+|+...
T Consensus        77 l~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~f  129 (138)
T COG3565          77 LPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGF  129 (138)
T ss_pred             EEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecc
Confidence             45699999999999999875443        347889999999999999654

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.50  E-value=1.5e-13  Score=93.19  Aligned_cols=100  Identities=18%  Similarity=0.175  Sum_probs=72.0

Q ss_pred             eeeeeeEEEEeC--CHHHHHHHHhhhcCCeeccccCCCC--CCceEEEEEe--CCeEEEEEeeCCC-CCC-CC---CCCC
Q 032146           23 VVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWV--GAEMIHLMELPNP-DPL-SG---RPEH   91 (146)
Q Consensus        23 ~~~l~hv~l~v~--d~~~~~~FY~~~lg~~~~~~~~~~~--~~~~~~~~~~--~~~~~~l~~~~~~-~~~-~~---~~~~   91 (146)
                      +.+++||++.|+  |++++++||+++|||+.........  .......+..  ++..+.|...... ... ..   ....
T Consensus         1 ~~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~~~~~s~~~~fl~~~~   80 (191)
T cd07250           1 LTRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPASGKRKSQIQEFLEYYG   80 (191)
T ss_pred             CceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCCCCCccHHHHHHHHhC
Confidence            357999999999  9999999999999999876554322  2334445554  3457777765442 111 00   1123


Q ss_pred             CCCccEEEEEeCCHHHHHHHHHHCCCeEecc
Q 032146           92 GGRDRHTCIAIRDVSKLKMILDKAGISYTLS  122 (146)
Q Consensus        92 ~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~  122 (146)
                      +.|..|+||.|+|+++.+++|+++|+++...
T Consensus        81 G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~  111 (191)
T cd07250          81 GAGVQHIALATDDIFATVAALRARGVEFLPI  111 (191)
T ss_pred             CCceeEEEEECCCHHHHHHHHHHcCCeeccC
Confidence            5678999999999999999999999998543

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.42  E-value=2.1e-11  Score=77.56  Aligned_cols=106  Identities=18%  Similarity=0.139  Sum_probs=75.5

Q ss_pred             EEEe-CCHHHHHHHHhhhcCCeeccccCC----------CCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEE
Q 032146           30 GILC-ENLERSLEFYQNILGLEINEARPH----------DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   98 (146)
Q Consensus        30 ~l~v-~d~~~~~~FY~~~lg~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl   98 (146)
                      -|.+ .|.+++++||+++||+++......          ....+..+.+..++..+.+.........     ..+...++
T Consensus         4 ~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~l~~~d~~~~~~~-----~~~~~~~l   78 (128)
T cd06588           4 YLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQRLMASDGGPGFPF-----TFGNGISL   78 (128)
T ss_pred             EEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCEEEEEEcCCCCCCC-----CCCCCEEE
Confidence            4666 899999999999999999865431          1122345667788887777664433211     11223679


Q ss_pred             EEEeCC---HHHHHHHHHHCCCeEecc----CCCceEEEEECCCCCeEEE
Q 032146           99 CIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEF  141 (146)
Q Consensus        99 ~~~v~d---~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DpdG~~ie~  141 (146)
                      ++.++|   +++++++|.+.| .+..+    ++|.+.++++||+|+.|+|
T Consensus        79 ~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~~~~v~Dp~G~~W~i  127 (128)
T cd06588          79 SVECDSEEEADRLFEALSEGG-TVLMPLQKTFWSPLFGWVTDRFGVSWQI  127 (128)
T ss_pred             EEECCCHHHHHHHHHHHhcCC-eEeccchhcCcccccEEEECCCCCEEEe
Confidence            999985   777889987777 55433    3677899999999999987

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.37  E-value=8e-12  Score=92.17  Aligned_cols=104  Identities=16%  Similarity=0.186  Sum_probs=73.4

Q ss_pred             CCceeeeeeeEEEEeC--CHHHHHHHHhhhcCCeeccccCCC--CCCceEEEEEe--CCeEEEEEeeCCCC-CCC-C---
Q 032146           19 IDYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHD--KLPYRGAWLWV--GAEMIHLMELPNPD-PLS-G---   87 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~--d~~~~~~FY~~~lg~~~~~~~~~~--~~~~~~~~~~~--~~~~~~l~~~~~~~-~~~-~---   87 (146)
                      ..+.+.+++||++.|.  |++++++||+++|||+........  ........+..  ++..++|..+.... ... .   
T Consensus       152 ~~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~g~~~i~L~ep~~~~~~s~i~~fl  231 (353)
T TIGR01263       152 PGVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFL  231 (353)
T ss_pred             CCCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCCCcEEEEEeccCCCCCCCHHHHHH
Confidence            4567899999999999  999999999999999987644321  11222222332  44678887643221 111 0   


Q ss_pred             CCCCCCCccEEEEEeCCHHHHHHHHHHCCCeEecc
Q 032146           88 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS  122 (146)
Q Consensus        88 ~~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~  122 (146)
                      ....+.|+.|+||.|+|+++.+++|+++|+++...
T Consensus       232 ~~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~  266 (353)
T TIGR01263       232 EFYNGAGVQHIALNTDDIVRTVRALRARGVEFLDT  266 (353)
T ss_pred             HHcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcC
Confidence            11236778999999999999999999999987644

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.36  E-value=3.4e-11  Score=88.87  Aligned_cols=97  Identities=12%  Similarity=0.130  Sum_probs=72.8

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCC--CCCCCCCccEEEEEe
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAI  102 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~hl~~~v  102 (146)
                      +++||.+.|+|++++++||.+.|||+......... ....+.+..++..++|........+..  ...++.+..|+||.|
T Consensus         2 ~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~-~~~~~~~~~G~~~l~L~~~~~~~s~~~~~~~~hg~gv~~iaf~V   80 (353)
T TIGR01263         2 GFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHR-EKASHVLRQGQINFVLTAPYSSDSPAADFAAKHGDGVKDVAFRV   80 (353)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCC-ceeEEEEEeCCEEEEEecCCCCCchHHHHHHhCCCceEEEEEEE
Confidence            68999999999999999999999999887521111 113344566888888887654432111  123567789999999


Q ss_pred             CCHHHHHHHHHHCCCeEecc
Q 032146          103 RDVSKLKMILDKAGISYTLS  122 (146)
Q Consensus       103 ~d~~~~~~~l~~~G~~~~~~  122 (146)
                      +|+++++++++++|+.+..+
T Consensus        81 ~Dv~~a~~~l~~~Ga~~v~~  100 (353)
T TIGR01263        81 DDAAAAFEAAVERGAEPVQA  100 (353)
T ss_pred             CCHHHHHHHHHHCCCEeccC
Confidence            99999999999999998654

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.31  E-value=3.2e-10  Score=72.26  Aligned_cols=113  Identities=19%  Similarity=0.167  Sum_probs=83.5

Q ss_pred             EEEeC-CHHHHHHHHhhhcCCeeccccCCCC----------CCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEE
Q 032146           30 GILCE-NLERSLEFYQNILGLEINEARPHDK----------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   98 (146)
Q Consensus        30 ~l~v~-d~~~~~~FY~~~lg~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl   98 (146)
                      -|..+ |-+++++||+++||.+...+.....          ..+-.+-+..++..+.+........   ....++.-.-|
T Consensus         5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~~im~sd~~~~~~---~~~~~~~s~~l   81 (136)
T COG2764           5 YLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGSTIMLSDAFPDMG---ATEGGGTSLSL   81 (136)
T ss_pred             EEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCEEEEEecCCCccC---cccCCCeeEEE
Confidence            35677 9999999999999999987665444          3455677888888776655443322   11111222457


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeec
Q 032146           99 CIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        99 ~~~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      .+.++|++++++++.+.|+++..+.    +|.+...++||.|+.|.|....
T Consensus        82 ~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~r~G~v~D~fGv~W~l~~~~  132 (136)
T COG2764          82 DLYVEDVDAVFERAAAAGATVVMPLEDTFWGDRYGQVTDPFGVVWMLNTPV  132 (136)
T ss_pred             EEEehHHHHHHHHHHhcCCeEEecchhcCcccceEEEECCCCCEEEEecCc
Confidence            7777799999999999998876553    7889999999999999987654

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.30  E-value=1.1e-11  Score=77.83  Aligned_cols=119  Identities=23%  Similarity=0.325  Sum_probs=71.9

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCce-EEEEEe-CC-eEEEEEeeC-------CCC-CCCCCCCCC-
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYR-GAWLWV-GA-EMIHLMELP-------NPD-PLSGRPEHG-   92 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~-~~~~~~-~~-~~~~l~~~~-------~~~-~~~~~~~~~-   92 (146)
                      +++|++|.|+|++++++||+++||++............. ...+.. .. .........       ... ......... 
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPGG   81 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecCc
Confidence            689999999999999999999999999886553322110 111111 11 000110100       000 000000111 


Q ss_pred             -CCccEEEEEeCC---HHHHHHHHHHCCCeEeccC--CCceEEEEECCCCCeEEEEe
Q 032146           93 -GRDRHTCIAIRD---VSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus        93 -~~~~hl~~~v~d---~~~~~~~l~~~G~~~~~~~--~g~~~~~~~DpdG~~ie~~~  143 (146)
                       .+..|+++.+++   ..+....+...|..+....  .....+|+.||||++||+.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          82 DLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGVHVYFRDPDGILIELAT  138 (138)
T ss_pred             hhccCceeEecccccccceEEEeeCCCCCEEEeecCCCcceEEEEECCCCcEEEeeC
Confidence             235799999997   6666777777788865432  12238999999999999974

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=99.24  E-value=1.4e-10  Score=83.73  Aligned_cols=104  Identities=18%  Similarity=0.209  Sum_probs=71.4

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeC-
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  103 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~-  103 (146)
                      +..||+|.|+|++++++||+++|++.. ...+  ..   .+ +  ++..+.+..... +.      ......-+||.++ 
T Consensus       247 ~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fsde--~a---~c-m--~dtI~vMllt~~-D~------~~~~evLl~Ls~~S  310 (357)
T PRK01037        247 KTFSVVLEVQDLRRAKKFYSKMFGLEC-WDGD--KL---FL-L--GKTSLYLQQTKA-EK------KNRGTTTLSLELEC  310 (357)
T ss_pred             ceEEEEeeeCCHHHHHHHHHHHhCCCC-CCCC--cc---cc-c--cCcEEEEEecCC-CC------CCcceEEEEeccCC
Confidence            466899999999999999999988874 3222  11   11 1  444444443333 11      1123466999998 


Q ss_pred             --CHHHHHHHHHHCCCeEeccC-CCceEEEEECCCCCeEEEEee
Q 032146          104 --DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       104 --d~~~~~~~l~~~G~~~~~~~-~g~~~~~~~DpdG~~ie~~~~  144 (146)
                        ++|++++++.+.|.....++ +.+..-.|.|||||.||+++.
T Consensus       311 re~VD~lv~~A~aaGG~~~~~~~D~Gf~rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        311 EHDFVRFLRRWEMLGGELGEQADGHFPLRLVFDLDGHIWVVSCV  354 (357)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCcccccCcceeECCCCCEEEEEEE
Confidence              68899999999998664443 222267789999999999875

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.19  E-value=2e-10  Score=78.38  Aligned_cols=118  Identities=18%  Similarity=0.201  Sum_probs=84.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCC-----------CCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG   92 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   92 (146)
                      .++-|+.+.|.|..+++.||+++||+++.+.++.+.           .....+++..|...-++..-...+-.......+
T Consensus        16 ~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~YelG   95 (299)
T KOG2943|consen   16 RRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYELG   95 (299)
T ss_pred             hheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCccceecc
Confidence            467789999999999999999999999987655433           233345666664433333323333333455666


Q ss_pred             CCccEEEEEeCCHHHHHHHHHHCCCeEeccCCCceEEEEECCCCCeEEEEeec
Q 032146           93 GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        93 ~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      ....|+.+.++|+-..++.+...|.    ...+...++++||||+.+++.+..
T Consensus        96 ndfg~i~I~s~dv~~~ve~v~~p~~----~~~g~~~~~v~dPdGykF~l~~~~  144 (299)
T KOG2943|consen   96 NDFGGITIASDDVFSKVEKVNAPGG----KGSGCGIAFVKDPDGYKFYLIDRG  144 (299)
T ss_pred             CCcccEEEeHHHHHHHHHHhcCcCC----cccceEEEEEECCCCcEEEEeccC
Confidence            6778999999999888888877654    223566789999999999998643

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.18  E-value=1.9e-10  Score=85.30  Aligned_cols=101  Identities=13%  Similarity=0.107  Sum_probs=75.2

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCC-----CCceEEEEEeCC--eEEEEEeeCCC---CCCCC---
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWVGA--EMIHLMELPNP---DPLSG---   87 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~l~~~~~~---~~~~~---   87 (146)
                      ..+..|+||++.|.+++.++.||+++|||+.........     ..++...+..++  ..+.|..+...   ..+..   
T Consensus       176 ~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g~v~ipLnEP~~~~~~~SqI~eFL  255 (398)
T PLN02875        176 YGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNEMVLLPLNEPTFGTKRKSQIQTYL  255 (398)
T ss_pred             CCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCCcEEEEeccCCCCCCCcChHHHHH
Confidence            457899999999999999999999999998875443221     224555565543  57888886532   11111   


Q ss_pred             CCCCCCCccEEEEEeCCHHHHHHHHHHC----CCeEec
Q 032146           88 RPEHGGRDRHTCIAIRDVSKLKMILDKA----GISYTL  121 (146)
Q Consensus        88 ~~~~~~~~~hl~~~v~d~~~~~~~l~~~----G~~~~~  121 (146)
                      ....|.|++||||.++|+.+.+++|+++    |+++..
T Consensus       256 ~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~  293 (398)
T PLN02875        256 EHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMP  293 (398)
T ss_pred             HhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCC
Confidence            1234678999999999999999999999    999765

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.95  E-value=5.5e-09  Score=74.14  Aligned_cols=106  Identities=15%  Similarity=0.137  Sum_probs=76.0

Q ss_pred             CCCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCc--eEEEEEeCCeEEEEEeeCCCCCCC---CCCCCC
Q 032146           18 KIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY--RGAWLWVGAEMIHLMELPNPDPLS---GRPEHG   92 (146)
Q Consensus        18 ~~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~   92 (146)
                      +...++..++||.+.|.|...+..||+..|||+............  ....++.|...+.+...-.+..+.   ..+.++
T Consensus        10 ~~~g~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~Hg   89 (381)
T KOG0638|consen   10 PEAGKFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVKHG   89 (381)
T ss_pred             ccccceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhhcc
Confidence            344568899999999999999999999999999876443222211  122233454554444443333221   234677


Q ss_pred             CCccEEEEEeCCHHHHHHHHHHCCCeEeccC
Q 032146           93 GRDRHTCIAIRDVSKLKMILDKAGISYTLSK  123 (146)
Q Consensus        93 ~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~  123 (146)
                      .+..-+||+|+|.+++.+.+.++|+.+..++
T Consensus        90 dgvkdvafeVeD~da~~~~~va~Ga~v~~~p  120 (381)
T KOG0638|consen   90 DGVKDVAFEVEDADAIFQEAVANGAKVVRPP  120 (381)
T ss_pred             cchhceEEEecchHHHHHHHHHcCCcccCCc
Confidence            8888999999999999999999999987765

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.91  E-value=3.2e-09  Score=71.03  Aligned_cols=93  Identities=19%  Similarity=0.307  Sum_probs=57.9

Q ss_pred             eeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCC--CCC------CCCCCccE
Q 032146           26 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS--GRP------EHGGRDRH   97 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~------~~~~~~~h   97 (146)
                      |+|+.+.|+|++++.++|++.|||.+.........+.....+.+++..+||+...+.....  ...      ..+.+...
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~YlEli~i~~~~~~~~~~~~~~~~~~~~~~g~~~   80 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDGYLELIAIDPEAPAPDRGRWFGLDRLAGGEGLYG   80 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSSEEEEEEES-HHHSTGGGT-TTTHHHHT--EEEE
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCceEEEEEeCCcccccccccceechhhcCCCCeEE
Confidence            6899999999999999998899999987655555455566667777799999965443221  111      13567789


Q ss_pred             EEEEeCCHHHHHHHHHHCCCe
Q 032146           98 TCIAIRDVSKLKMILDKAGIS  118 (146)
Q Consensus        98 l~~~v~d~~~~~~~l~~~G~~  118 (146)
                      +|+.++|+++..++|.+.|+.
T Consensus        81 ~~l~t~d~~~~~~~l~~~G~~  101 (175)
T PF13468_consen   81 WALRTDDIEAVAARLRAAGLD  101 (175)
T ss_dssp             EEEE-S-HHHHHHHHHTTT-E
T ss_pred             EEEecCCHHHHHHHHHhcCCC
Confidence            999999999999999999986

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.88  E-value=2.7e-08  Score=69.41  Aligned_cols=97  Identities=22%  Similarity=0.255  Sum_probs=67.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCC-CCCCCccEEEEEe
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP-EHGGRDRHTCIAI  102 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~hl~~~v  102 (146)
                      ..|.||.|.|.|++++.+||+++|||++..+.+      ...|+..|+...++....-........ ....+...+.+.+
T Consensus       167 t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~------~A~F~a~G~YHHHia~N~W~s~~~~~~~~~~~GLa~~~i~~  240 (265)
T COG2514         167 TIIGHVHLKVADLEEAEQFYEDVLGLEVTARGP------SALFLASGDYHHHLAANTWNSRGARPRNANASGLAWLEIHT  240 (265)
T ss_pred             cEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCC------cceEEecCCcceeEEEeccccCCCCCCCCCCCCcceEEEEc
Confidence            569999999999999999999999999998733      347788888877776655443222222 2345667888888


Q ss_pred             CCHHHHHHHHHHCCCeEeccCCCceEEEEECCCCCeEEEE
Q 032146          103 RDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  142 (146)
Q Consensus       103 ~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DpdG~~ie~~  142 (146)
                      ++-..+.......                +||.|+.|.+.
T Consensus       241 ~~~~~l~~~~~~~----------------~Dp~G~~i~~~  264 (265)
T COG2514         241 PDPEKLDATGTRL----------------TDPWGIVIRVV  264 (265)
T ss_pred             CCcccccccccce----------------ecCCCceEEEe
Confidence            7643332111111                89999999875

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.83  E-value=2.6e-08  Score=63.83  Aligned_cols=121  Identities=11%  Similarity=0.028  Sum_probs=79.6

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEE
Q 032146           19 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   98 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl   98 (146)
                      +|+.+.++.+|.+.++|.+++..|++ .|||+...+-...    ....++.|+..+.|-..++.........++.+..-+
T Consensus         3 nP~g~~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrsk----~v~l~rQG~I~~vln~ep~s~a~~~~~~HG~sv~ai   77 (139)
T PF14696_consen    3 NPLGLDGFDFVEFAVPDAQALAQLFT-ALGFQPVARHRSK----DVTLYRQGDINFVLNSEPDSFAAEFAAQHGPSVCAI   77 (139)
T ss_dssp             -TT-EEEEEEEEEE-SSTTSCHHHHC-CCCEEEECCECCC----SEEEEEETTEEEEEEEESTSCHHHHHHHHSSEEEEE
T ss_pred             CCCCCCCeEEEEEecCCHHHHHHHHH-HhCcceEEecCCc----ceEEEEeCCEEEEEeCCCcchHHHHHHhcCCEEEEE
Confidence            57889999999999999888888885 6999998754321    345567798888887744321111112456777899


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEeccC---CCceEEEEECCCCCeEEEEee
Q 032146           99 CIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        99 ~~~v~d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +|+|+|..++++++.++|.+....+   .....--++-+.|.++-|++.
T Consensus        78 afrV~Da~~A~~rA~~~GA~~~~~~~~~~e~~~paI~g~G~sl~yfVdr  126 (139)
T PF14696_consen   78 AFRVDDAAAAYERAVALGAEPVQEPTGPGELNIPAIRGIGGSLHYFVDR  126 (139)
T ss_dssp             EEEES-HHHHHHHHHHTT--EEEEEEETT-BEEEEEE-CCC-EEEEEE-
T ss_pred             EEEeCCHHHHHHHHHHcCCcCcccCCCCCcEeeeeEEccCCCEEEEEec
Confidence            9999999999999999999876543   223444566677777766654

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.82  E-value=3.6e-08  Score=67.59  Aligned_cols=111  Identities=23%  Similarity=0.318  Sum_probs=71.8

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeC-
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  103 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~-  103 (146)
                      .+..|.|.|.|++++++||+++||+++.+....    ...+.+..++.+..|.-....+.    -....+...++|.++ 
T Consensus       149 pv~~V~l~VgdL~ks~kyw~~~lgM~ilekeek----~t~~~mgYgd~q~~LElt~~~~~----id~~kg~griafaip~  220 (299)
T KOG2943|consen  149 PVLQVMLNVGDLQKSIKYWEKLLGMKILEKEEK----YTRARMGYGDEQCVLELTYNYDV----IDRAKGFGRIAFAIPT  220 (299)
T ss_pred             CeEEEEEEehhHHHHHHHHHHHhCcchhhhhhh----hhhhhhccCCcceEEEEEeccCc----ccccccceeEEEeccc
Confidence            467899999999999999999999999884321    12344555555444433222221    111123345666665 


Q ss_pred             -CHHHHHHHHHHCCCeE----ec-cCC---CceEEEEECCCCCeEEEEe
Q 032146          104 -DVSKLKMILDKAGISY----TL-SKS---GRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       104 -d~~~~~~~l~~~G~~~----~~-~~~---g~~~~~~~DpdG~~ie~~~  143 (146)
                       ++..+-+.++..+-++    .. +.+   ....+.+.||||+.|-|+-
T Consensus       221 d~~~~l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVd  269 (299)
T KOG2943|consen  221 DDLPKLQEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVD  269 (299)
T ss_pred             cccccHHHHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEec
Confidence             7877877787765443    22 112   3577889999999998864

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.73  E-value=1.9e-06  Score=53.20  Aligned_cols=109  Identities=17%  Similarity=0.174  Sum_probs=65.6

Q ss_pred             eeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe--CCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCC
Q 032146           27 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV--GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  104 (146)
Q Consensus        27 ~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d  104 (146)
                      .+-.|+|+|-+.-++||.+.|||++..+..      ..+++..  +...+.|-..|....+.  -.....+.++.+.|++
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~~erlvlEESP~~rtr~--V~G~KKl~~ivIkv~~   73 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQKEERLVLEESPSMRTRA--VEGPKKLNRIVIKVPN   73 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT--EEEEEEE--TTT-B----SSS-SEEEEEEEESS
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCCceEEEEecCCcccccc--ccCcceeeEEEEEcCC
Confidence            457899999999999999999999998654      3354544  23467777666554211  1112345789999988


Q ss_pred             HHHHHHHHHHCCCeEe--ccCCCceEEEEECCCCCeEEEEee
Q 032146          105 VSKLKMILDKAGISYT--LSKSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       105 ~~~~~~~l~~~G~~~~--~~~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ..++ +.|..+|..+.  .....++.|-..+|+|+.+.++.-
T Consensus        74 ~~EI-e~LLar~~~~~~l~kg~~gyAfe~vSPEgd~~llhaE  114 (125)
T PF14506_consen   74 PKEI-EALLARGAQYDRLYKGKNGYAFEAVSPEGDRFLLHAE  114 (125)
T ss_dssp             HHHH-HHHHHC-S--SEEEE-SSSEEEEEE-TT--EEEEE--
T ss_pred             HHHH-HHHHhcccccceeEEcCCceEEEEECCCCCEEEEEEc
Confidence            7776 55666665543  234568999999999999998754

>PRK10148 hypothetical protein; Provisional

Probab=98.73  E-value=2.5e-06  Score=55.53  Aligned_cols=108  Identities=14%  Similarity=0.036  Sum_probs=71.0

Q ss_pred             EEEeC-CHHHHHHHHhhhcCCeeccccC-----C---------------CCCCceEEEEEeCCeEEEEEeeCCCCCCCCC
Q 032146           30 GILCE-NLERSLEFYQNILGLEINEARP-----H---------------DKLPYRGAWLWVGAEMIHLMELPNPDPLSGR   88 (146)
Q Consensus        30 ~l~v~-d~~~~~~FY~~~lg~~~~~~~~-----~---------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~   88 (146)
                      -|..+ |-+++++||+++||.++.....     .               ....+-.+.+.+++..+.+.......     
T Consensus         6 yL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~~lm~sD~~~~~-----   80 (147)
T PRK10148          6 YLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSG-----   80 (147)
T ss_pred             EEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCEEEEEECCCCCc-----
Confidence            34554 8999999999999988764321     0               11234467778888766554321111     


Q ss_pred             CCCCCCccEEEEEeCCHHH---HHHHHHHCCCeEecc----CCCceEEEEECCCCCeEEEEee
Q 032146           89 PEHGGRDRHTCIAIRDVSK---LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        89 ~~~~~~~~hl~~~v~d~~~---~~~~l~~~G~~~~~~----~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +.. ....+|++.++|.++   ++++| +.|.++..+    .++.+...++||.|+.|.|...
T Consensus        81 ~~~-~~~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~~~g~v~D~fGi~W~l~~~  141 (147)
T PRK10148         81 KAH-YSGFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVV  141 (147)
T ss_pred             CCC-CCeEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhhccEEEECCCCCEEEEEec
Confidence            111 123678888888877   44555 577777544    3677889999999999998754

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.69  E-value=7.4e-07  Score=66.51  Aligned_cols=119  Identities=14%  Similarity=0.136  Sum_probs=81.3

Q ss_pred             eeeEEEEeCCHHHHHHHHhhhcCCeeccccCC--CCCCceEEEEEeCCeEEEEEeeCCCC--C----C------C---C-
Q 032146           26 VHHVGILCENLERSLEFYQNILGLEINEARPH--DKLPYRGAWLWVGAEMIHLMELPNPD--P----L------S---G-   87 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~--~----~------~---~-   87 (146)
                      ++||.+.|.|..++..||+..|||+.......  .........++.|+..+.+.......  .    +      +   . 
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSGDLVFLFTAPYSPKIGAGDDDPASTAPHPSFSSD   80 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeCCEEEEEeCCCCCccccccccccccccccccCcH
Confidence            58999999999999999999999998764432  11122334456677777666653221  0    0      0   0 


Q ss_pred             -----CCCCCCCccEEEEEeCCHHHHHHHHHHCCCeEeccCCC---------ceEEEEECCCCCeEEEEee
Q 032146           88 -----RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSG---------RPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        88 -----~~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~g---------~~~~~~~DpdG~~ie~~~~  144 (146)
                           ...++.+..-++|+|+|++++++++.++|+.+..++.+         ....-+.-+.|..+-|++.
T Consensus        81 ~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr  151 (398)
T PLN02875         81 AARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSY  151 (398)
T ss_pred             HHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEcc
Confidence                 11456777899999999999999999999987654311         2334466677777777664

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.36  E-value=6.8e-07  Score=64.63  Aligned_cols=103  Identities=16%  Similarity=0.214  Sum_probs=71.1

Q ss_pred             CCceeeeeeeEEEEe--CCHHHHHHHHhhhcCCeeccccCCCC--CCceEEEEEe--CCeEEEEEeeCCCCCCCC---CC
Q 032146           19 IDYGVVSVHHVGILC--ENLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWV--GAEMIHLMELPNPDPLSG---RP   89 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v--~d~~~~~~FY~~~lg~~~~~~~~~~~--~~~~~~~~~~--~~~~~~l~~~~~~~~~~~---~~   89 (146)
                      ....+..|+|++..|  .+++....||+++|+|+.....+...  ..++.-.+..  |..++-|-...+......   ..
T Consensus       161 ~~~g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~  240 (363)
T COG3185         161 GGVGLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLRE  240 (363)
T ss_pred             cccCceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCCcEEeecccCCCchhHHHHHHHH
Confidence            344567899998877  59999999999999999886544222  2223222222  333555555444332111   12


Q ss_pred             CCCCCccEEEEEeCCHHHHHHHHHHCCCeEec
Q 032146           90 EHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  121 (146)
Q Consensus        90 ~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~  121 (146)
                      ..|.|+.||+|.++|+-+.+++|++.|+++..
T Consensus       241 y~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~  272 (363)
T COG3185         241 YRGEGIQHIAFGTDDIYATVAALRERGVKFLP  272 (363)
T ss_pred             hCCCcceEEEecccHHHHHHHHHHHcCCccCC
Confidence            46788999999999999999999999999754

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=97.77  E-value=0.00071  Score=49.40  Aligned_cols=114  Identities=11%  Similarity=0.018  Sum_probs=77.5

Q ss_pred             CCCCceeeeeeeEEEEeCCH-HHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCc
Q 032146           17 DKIDYGVVSVHHVGILCENL-ERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRD   95 (146)
Q Consensus        17 ~~~~~~~~~l~hv~l~v~d~-~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   95 (146)
                      ...|+...++.+|.+.|.|. ++..+++ ..|||.....-...    ...-++.|+..+.+-..+..........++.+.
T Consensus        14 ~~~P~~~~GfeFvEf~~~d~~~~l~~l~-~~lGF~~~~~Hrsk----~v~l~rQGdinlvvn~~~~s~a~~f~~~Hgps~   88 (363)
T COG3185          14 LANPEGTDGFEFVEFAVPDPQEALGALL-GQLGFTAVAKHRSK----AVTLYRQGDINLVVNAEPDSFAAEFLDKHGPSA   88 (363)
T ss_pred             ccCCCCCCceeEEEEecCCHHHHHHHHH-HHhCcccccccccc----ceeEEEeCCEEEEEcCCCcchhhHHHHhcCCch
Confidence            34566788999999999999 5555555 55999877533211    223345677777666554431111122455566


Q ss_pred             cEEEEEeCCHHHHHHHHHHCCCeEeccC-------------CCceEEEEECCC
Q 032146           96 RHTCIAIRDVSKLKMILDKAGISYTLSK-------------SGRPAIFTRDPD  135 (146)
Q Consensus        96 ~hl~~~v~d~~~~~~~l~~~G~~~~~~~-------------~g~~~~~~~Dpd  135 (146)
                      .-++|.|+|...++++..+.|.+....+             .|+...|+.|.+
T Consensus        89 ~a~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~  141 (363)
T COG3185          89 CAMAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRY  141 (363)
T ss_pred             heeEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccC
Confidence            7899999999999999999998542211             367888998888

>PF15067 FAM124: FAM124 family

Probab=97.76  E-value=0.0005  Score=47.43  Aligned_cols=102  Identities=20%  Similarity=0.262  Sum_probs=61.9

Q ss_pred             eeeEEEEeC--CHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe---CCeEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           26 VHHVGILCE--NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV---GAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        26 l~hv~l~v~--d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      +--++|.|+  |.+.+++||+-+|+-+......      .-+++.+   .+..+.|-...-+......|..   ..-+.|
T Consensus       129 ilRftly~~~~N~~d~vr~Yelil~~~~~~~k~------~FC~F~lys~~~~~iQlsLK~lp~~~~p~p~e---savLqF  199 (236)
T PF15067_consen  129 ILRFTLYCSFDNYEDMVRFYELILQREPTQQKE------DFCFFTLYSQPGLDIQLSLKQLPPGMSPEPTE---SAVLQF  199 (236)
T ss_pred             EEEEEEEecCCCHHHHHHHHHHHhccCcceeeC------CcEEEEEecCCCeEEEEEeccCCCCCCccccc---ceEEEE
Confidence            345888998  9999999999999998866433      1233333   3334444332221111112222   256999


Q ss_pred             EeCCHHHHHHHHHHCCCeEeccCCCceEEEEECCCCCeEEE
Q 032146          101 AIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF  141 (146)
Q Consensus       101 ~v~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DpdG~~ie~  141 (146)
                      .|.|+.+++.-|-.--.+++..+     --..|||||.|=+
T Consensus       200 ~V~~igqLvpLLPnpc~PIS~~r-----WqT~D~DGNkILL  235 (236)
T PF15067_consen  200 RVEDIGQLVPLLPNPCSPISETR-----WQTEDYDGNKILL  235 (236)
T ss_pred             EecchhhhcccCCCCcccccCCc-----ceeeCCCCCEecc
Confidence            99999998655543333333332     3468999999843

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=97.71  E-value=0.0031  Score=39.37  Aligned_cols=96  Identities=22%  Similarity=0.197  Sum_probs=59.9

Q ss_pred             CCHHHHHHHHhhhcCC-eecc--ccCC----CCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCCH-
Q 032146           34 ENLERSLEFYQNILGL-EINE--ARPH----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV-  105 (146)
Q Consensus        34 ~d~~~~~~FY~~~lg~-~~~~--~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d~-  105 (146)
                      .|.++|.+||.++||- ++..  ..+.    ....+-.+.+.+++..+.........      ..+. ...|++.++|. 
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g~~lm~~D~~~~~------~~~~-~~sl~i~~~~~e   83 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGGQKLMASDGGPDF------PFGN-NISLCIECDDEE   83 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETTEEEEEEEESTS----------T-TEEEEEEESSHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECCeEEEEECCCCCC------CCCC-cEEEEEEcCCHH
Confidence            7999999999999984 2222  1111    11233456788888887766654211      1112 36788888865 


Q ss_pred             --HHHHHHHHHCCCeEeccCCCceEEEEECCCCCeEEEE
Q 032146          106 --SKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  142 (146)
Q Consensus       106 --~~~~~~l~~~G~~~~~~~~g~~~~~~~DpdG~~ie~~  142 (146)
                        ++++++|.+-|-      +......++|-.|..|.|+
T Consensus        84 e~~~~f~~Ls~gG~------~~~~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   84 EIDRIFDKLSEGGQ------WFSRYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHTTTE------TCCEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHcCCC------ccceeEEEEeCCCCEEEeC
Confidence              455777877775      3347889999999999875

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=97.40  E-value=0.00015  Score=52.11  Aligned_cols=102  Identities=19%  Similarity=0.196  Sum_probs=66.9

Q ss_pred             ceeeeeeeEEEEeC--CHHHHHHHHhhhcCCeeccccCCCCCC-----ceEEEEEeCCeEEEEEeeCCC--CCCC-C---
Q 032146           21 YGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKLP-----YRGAWLWVGAEMIHLMELPNP--DPLS-G---   87 (146)
Q Consensus        21 ~~~~~l~hv~l~v~--d~~~~~~FY~~~lg~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~--~~~~-~---   87 (146)
                      +.+..++|+...++  .++.+.+||.+.|||......++....     ++.+.+...+..+. +....+  +... .   
T Consensus       174 ~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vlan~~esi~-mpinEp~~G~k~ksQIq  252 (381)
T KOG0638|consen  174 GGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLANYEESIK-MPINEPAPGKKKKSQIQ  252 (381)
T ss_pred             cceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHhcCCccEE-EeccCCCCCCccHHHHH
Confidence            66888999999999  788999999999999887755533211     11111111111111 221111  1110 0   


Q ss_pred             ---CCCCCCCccEEEEEeCCHHHHHHHHHHCCCeEeccC
Q 032146           88 ---RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK  123 (146)
Q Consensus        88 ---~~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~  123 (146)
                         ....|.|..|+++.++|+-++.+.++++|+++..+|
T Consensus       253 eyv~y~gG~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~P  291 (381)
T KOG0638|consen  253 EYVEYHGGAGVQHIALNTEDIIEAIRGLRARGGEFLSPP  291 (381)
T ss_pred             HHHHhcCCCceeeeeecchHHHHHHHHHHhcCCccccCC
Confidence               124567889999999999999999999999987554

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=96.93  E-value=0.005  Score=37.68  Aligned_cols=50  Identities=18%  Similarity=0.125  Sum_probs=39.4

Q ss_pred             cEEEEEeCCHHHHHHHHHH-CCCeEec----cCCCceEEEEECCCC-CeEEEEeec
Q 032146           96 RHTCIAIRDVSKLKMILDK-AGISYTL----SKSGRPAIFTRDPDA-NALEFTQVD  145 (146)
Q Consensus        96 ~hl~~~v~d~~~~~~~l~~-~G~~~~~----~~~g~~~~~~~DpdG-~~ie~~~~~  145 (146)
                      +|++|.|+|+++..+.+.+ .|+....    +..+.+..++..++| ..|||+++.
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~   56 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPL   56 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEES
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeC
Confidence            5999999999999999998 8987543    234567778888888 689999875

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=96.01  E-value=0.03  Score=33.89  Aligned_cols=90  Identities=19%  Similarity=0.249  Sum_probs=41.0

Q ss_pred             eeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeC--
Q 032146           26 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--  103 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~--  103 (146)
                      +..+.|.|+| +++++||.++|+-+..                   ..+.+....+++-... +...=.+-.+-|.|+  
T Consensus         6 ~e~i~LNV~d-~~~~~fy~~~f~~~~~-------------------~~l~f~ea~G~DL~~~-~~~twDLe~Lkf~V~~~   64 (101)
T PF14507_consen    6 FESIELNVPD-AKSQSFYQSIFGGQLP-------------------FFLTFQEAQGPDLTIE-NNETWDLEMLKFQVPKD   64 (101)
T ss_dssp             E-EEEEEE-T--T---S--H---HHHT-------------------TTEEEEE---CCGSS--TTSBSSEEEEEEEES-S
T ss_pred             EEEEEEeCCC-hhHHHHHHhccccCCC-------------------ceEEEeeccCCccccC-CCcEEeeEEEEEEecCc
Confidence            4568899999 8899999999862221                   2333444433332211 111122356888888  


Q ss_pred             -CHHHHHHHHHHCCCeEeccCCCceEEEEECCCCCeE
Q 032146          104 -DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL  139 (146)
Q Consensus       104 -d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DpdG~~i  139 (146)
                       |+.++.+++.+.+.-   -+...+.+.+.||.|..+
T Consensus        65 ~Dl~~L~~~le~~~~f---idKk~k~l~~~Dps~IEl   98 (101)
T PF14507_consen   65 FDLAALKSHLEEQEFF---IDKKEKFLVTSDPSQIEL   98 (101)
T ss_dssp             --HHHHHHHTTTS-EE-----TT-SEEEEE-TTS-EE
T ss_pred             ccHHHHHHHhcccceE---ecCCceEEEEECCcceEE
Confidence             777888888773332   223478888999998654

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.94  E-value=0.16  Score=32.15  Aligned_cols=54  Identities=15%  Similarity=0.231  Sum_probs=36.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEe
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   78 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~   78 (146)
                      .++.|+++.|.|++++.+-..+ .|.+............+.+++.- ++..++|++
T Consensus        86 ~g~~hia~~v~d~d~~~~~l~~-~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e  140 (142)
T cd08353          86 LGLRRVMFAVDDIDARVARLRK-HGAELVGEVVQYENSYRLCYIRGPEGILIELAE  140 (142)
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCceeCCceecCCCeEEEEEECCCCCEEEeee
Confidence            4688999999999999999977 68887653222222334455554 344666665

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=94.82  E-value=0.23  Score=32.54  Aligned_cols=51  Identities=10%  Similarity=0.087  Sum_probs=35.6

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEEC-CCCCeEEEEee
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRD-PDANALEFTQV  144 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~D-pdG~~ie~~~~  144 (146)
                      |+.|+++.|.|+++..+.+.+ .|.++.....+...++..+ ..+..+++.+.
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   53 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEGDRVRLEEGGGGPGAVVDVLEE   53 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeCCEEEEEecCCCCCCEEEEEeC
Confidence            368999999999999999976 5988765443332222222 35788888764

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.81  E-value=0.35  Score=29.45  Aligned_cols=51  Identities=18%  Similarity=0.070  Sum_probs=36.1

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEeccC---C-CceEEEEECCCCCeEEEEee
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK---S-GRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~---~-g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++.|+++.|+|+++..+.+.+ .|..+....   . ..+.+.+..+++..+++...
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~   58 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSF   58 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEc
Confidence            468999999999999999975 799876432   1 22334455566777777643

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=94.21  E-value=0.39  Score=31.56  Aligned_cols=52  Identities=13%  Similarity=0.139  Sum_probs=37.6

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEecc-----C----C--------C-----ceEEEEECCCCCeEEEEeec
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLS-----K----S--------G-----RPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~-----~----~--------g-----~~~~~~~DpdG~~ie~~~~~  145 (146)
                      ++.|+++.|.|+++..+...+ .|.++...     .    .        +     ...+++..++|..||+++.+
T Consensus         4 ~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~   78 (162)
T TIGR03645         4 TFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFK   78 (162)
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEecc
Confidence            468999999999999999976 69876311     0    0        1     23456666778889999864

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=94.02  E-value=0.64  Score=29.36  Aligned_cols=59  Identities=12%  Similarity=0.017  Sum_probs=43.1

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeCCCC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPD   83 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~   83 (146)
                      .++.|+.+.|.|++++.+-.++ .|.++...-.......+.+++.- ++..++|++...+.
T Consensus        68 ~g~~hia~~V~Dvda~~~~l~~-~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~~~~  127 (136)
T cd08342          68 DGVCDVAFRVDDAAAAYERAVA-RGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRKGYK  127 (136)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-cCCeEccCceecCCeEEEEEEeccCCcEEEEEecCCCC
Confidence            4688999999999999998876 78888763333234455666665 46689998876653

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=94.02  E-value=0.3  Score=28.38  Aligned_cols=41  Identities=17%  Similarity=0.196  Sum_probs=34.1

Q ss_pred             CHHHHHHHHHHCCCeEec---cCCCceEEEEECCCCCeEEEEee
Q 032146          104 DVSKLKMILDKAGISYTL---SKSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       104 d~~~~~~~l~~~G~~~~~---~~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ..+++.+.+.++|+.+..   ...+.+.+...|.||+.+|+.=.
T Consensus        30 ~~~~~~~~l~~~G~~v~~ve~~~~g~yev~~~~~dG~~~ev~vD   73 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQVREVEFDDDGCYEVEARDKDGKKVEVYVD   73 (83)
T ss_pred             CHHHHHHHHHhcCCceEEEEEcCCCEEEEEEEECCCCEEEEEEc
Confidence            789999999999997643   34568999999999999998643

This is family M4 in the peptidase classification.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=94.02  E-value=0.37  Score=31.64  Aligned_cols=53  Identities=15%  Similarity=0.141  Sum_probs=37.2

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEe
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   78 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~   78 (146)
                      .+++||.+.|+|+..+..-+++ .|.+....-.... .-..+|+.- ++.++++..
T Consensus       114 rGfgHIci~V~di~sac~~lke-kGV~f~Kk~~dGk-~K~iaF~~dpDgywiei~~  167 (170)
T KOG2944|consen  114 RGFGHICIEVDDINSACERLKE-KGVRFKKKLKDGK-MKPIAFLHDPDGYWIEIEL  167 (170)
T ss_pred             CccceEEEEeCCHHHHHHHHHH-hCceeeecCCCcc-ccceeEEECCCCCeEEEee
Confidence            5899999999999999999987 8999655433222 224455544 344666654

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=93.81  E-value=0.46  Score=29.34  Aligned_cols=50  Identities=16%  Similarity=0.202  Sum_probs=33.7

Q ss_pred             ccEEEEEeCCHHHHHHHHHHC----CCeEeccCCCceEEEEECCCCCeEEEEeec
Q 032146           95 DRHTCIAIRDVSKLKMILDKA----GISYTLSKSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        95 ~~hl~~~v~d~~~~~~~l~~~----G~~~~~~~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      +.|+.+.|+|+++..+.+.+.    |.+......+ ...|+...++..+++.+.+
T Consensus         2 i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~-~~~~~~~~~~~~i~l~~~~   55 (128)
T cd07242           2 IHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED-GRSWRAGDGGTYLVLQQAD   55 (128)
T ss_pred             CceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc-CceEEecCCceEEEEEecc
Confidence            589999999999999888775    9887654322 2233332455667776543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=93.66  E-value=0.7  Score=28.15  Aligned_cols=50  Identities=18%  Similarity=0.239  Sum_probs=35.8

Q ss_pred             ccEEEEEeCCHHHHHHHHHH-CCCeEeccC---C--CceEEEEECC---CCCeEEEEee
Q 032146           95 DRHTCIAIRDVSKLKMILDK-AGISYTLSK---S--GRPAIFTRDP---DANALEFTQV  144 (146)
Q Consensus        95 ~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~---~--g~~~~~~~Dp---dG~~ie~~~~  144 (146)
                      +.|+++.|+|+++..+.+.+ .|++.....   .  +....++.+.   .|..+++++.
T Consensus         2 i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   60 (126)
T cd08346           2 LHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEW   60 (126)
T ss_pred             cccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEec
Confidence            57999999999999999986 698875432   1  1334555554   5677888764

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PLN02367 lactoylglutathione lyase

Probab=93.64  E-value=0.56  Score=32.99  Aligned_cols=56  Identities=21%  Similarity=0.361  Sum_probs=39.7

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeCC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN   81 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~   81 (146)
                      .+++|+++.|.|++++.+-.++ .|.++... +........+|+.- +|..++|++...
T Consensus       168 ~G~~HIaf~VdDVdaa~erL~a-~Gv~~v~~-P~~g~~~riaFIkDPDGn~IEL~e~~~  224 (233)
T PLN02367        168 RGFGHIGITVDDVYKACERFEE-LGVEFVKK-PNDGKMKGIAFIKDPDGYWIEIFDLKT  224 (233)
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-CCCEEEeC-CccCCceEEEEEECCCCCEEEEEeccc
Confidence            4799999999999999999966 99988752 22222223455644 466888887543

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=93.18  E-value=0.59  Score=28.62  Aligned_cols=46  Identities=15%  Similarity=0.248  Sum_probs=30.1

Q ss_pred             cEEEEEeCCHHHHHHHHHHCCCeEeccCCCceEEEEECCCCCeEEE
Q 032146           96 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF  141 (146)
Q Consensus        96 ~hl~~~v~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DpdG~~ie~  141 (146)
                      .|+++.|+|+++..+.....|.++.....+...+.+..++|..+.+
T Consensus         2 ~~i~l~V~D~~~a~~FY~~LGf~~~~~~~~~~~~~~~~~~~~~l~l   47 (122)
T cd07235           2 DAVGIVVADMAKSLDFYRRLGFDFPEEADDEPHVEAVLPGGVRLAW   47 (122)
T ss_pred             ceEEEEeccHHHHHHHHHHhCceecCCcCCCCcEEEEeCCCEEEEE
Confidence            6899999999999999988898765432222233344444444433

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=93.18  E-value=0.55  Score=27.46  Aligned_cols=48  Identities=15%  Similarity=0.214  Sum_probs=36.0

Q ss_pred             EEEEEeCCHHHHHHHHHH-CCCeEeccCC--CceEEEEECCCCCeEEEEeec
Q 032146           97 HTCIAIRDVSKLKMILDK-AGISYTLSKS--GRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        97 hl~~~v~d~~~~~~~l~~-~G~~~~~~~~--g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |+.+.+.|+++..+.+.+ .|.+......  .....++.++ +..+++.+.+
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~   51 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGGAEFAVLGLG-GTRLELFEGD   51 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCCEEEEEEecC-CceEEEecCC
Confidence            789999999999999997 8998766543  2455555554 7788887654

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=93.00  E-value=1  Score=28.06  Aligned_cols=50  Identities=12%  Similarity=0.167  Sum_probs=34.9

Q ss_pred             ccEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEECC--CCCeEEEEee
Q 032146           95 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDP--DANALEFTQV  144 (146)
Q Consensus        95 ~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~Dp--dG~~ie~~~~  144 (146)
                      +.|+.+.|.|+++..+.+.+ .|.++.....+....++..+  .+..+.+.+.
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   54 (134)
T cd08348           2 LSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPLGGLVFLSRDPDEHHQIALITG   54 (134)
T ss_pred             eeEEEEEecCHHHHHHHHHHhcCCEEEeeccCCcEEEEEecCCCceEEEEEec
Confidence            57999999999999999987 79987654432244454433  3456776654

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=92.93  E-value=0.82  Score=27.97  Aligned_cols=30  Identities=13%  Similarity=0.398  Sum_probs=25.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccc
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEA   54 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~   54 (146)
                      .++.|+.+.|.|++++.+...+ .|.++...
T Consensus        71 ~g~~h~~f~v~d~~~~~~~l~~-~G~~~~~~  100 (128)
T cd07249          71 EGLHHIAFEVDDIDAALARLKA-QGVRLLQE  100 (128)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCeeecc
Confidence            5688999999999999998877 68887664

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.45  E-value=0.81  Score=27.07  Aligned_cols=50  Identities=12%  Similarity=0.149  Sum_probs=33.6

Q ss_pred             ccEEEEEeCCHHHHHHHHH-HCCCeEeccCC-CceEEEEECCCCCeEEEEee
Q 032146           95 DRHTCIAIRDVSKLKMILD-KAGISYTLSKS-GRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        95 ~~hl~~~v~d~~~~~~~l~-~~G~~~~~~~~-g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +.|+++.|+|+++..+.+. ..|........ .....++..+++..+++...
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~i~l~~~   52 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLFPGAWLYAGDGPQLHLIEE   52 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCCCceEEEeCCCcEEEEEec
Confidence            3699999999999999886 56887654322 12334555455556777654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.44  E-value=1.4  Score=26.83  Aligned_cols=50  Identities=20%  Similarity=0.249  Sum_probs=34.0

Q ss_pred             ccEEEEEeCCHHHHHHHHHH-CCCeEecc----CCCceEEEEECCCCCeEEEEee
Q 032146           95 DRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        95 ~~hl~~~v~d~~~~~~~l~~-~G~~~~~~----~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +.|+++.|+|+++..+.+.+ .|.+....    ..+....++.-.+|..+++++.
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   56 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTR   56 (125)
T ss_pred             ceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcC
Confidence            47999999999999998877 58876421    1232333444346777888753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=92.37  E-value=0.23  Score=33.06  Aligned_cols=50  Identities=24%  Similarity=0.298  Sum_probs=27.2

Q ss_pred             cEEEEEeCCHHHHHHHH-HHCCCeEeccC----CCceEEEEECCCCCeEEEEeecC
Q 032146           96 RHTCIAIRDVSKLKMIL-DKAGISYTLSK----SGRPAIFTRDPDANALEFTQVDG  146 (146)
Q Consensus        96 ~hl~~~v~d~~~~~~~l-~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~~  146 (146)
                      .|+.+.|+|+++..+++ .+.|..+....    .|.....+.=++| .||++..++
T Consensus         2 DH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~-YlEli~i~~   56 (175)
T PF13468_consen    2 DHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDG-YLELIAIDP   56 (175)
T ss_dssp             EEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSS-EEEEEEES-
T ss_pred             CEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCc-eEEEEEeCC
Confidence            69999999999999999 88899986432    2333333333667 999998653

>PRK11478 putative lyase; Provisional

Probab=92.06  E-value=1.8  Score=26.63  Aligned_cols=54  Identities=9%  Similarity=0.174  Sum_probs=33.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEe
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   78 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~   78 (146)
                      .++.|+.+.|.|++++.+-..+ .|.++.........+...+|+.- .+..+++++
T Consensus        74 ~g~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         74 CGLRHLAFSVDDIDAAVAHLES-HNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             CceeEEEEEeCCHHHHHHHHHH-cCCeeeccccCCCCCCEEEEEECCCCCEEEEEe
Confidence            4688999999999999998866 79887542211212223444433 344555543

>PF06185 YecM: YecM protein; InterPro: IPR010393 This family consists of several bacterial YecM proteins of unknown function

Probab=91.81  E-value=2.2  Score=28.89  Aligned_cols=77  Identities=19%  Similarity=0.151  Sum_probs=41.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeecccc-CCCCCCceEE----EEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEE
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEAR-PHDKLPYRGA----WLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   98 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~-~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl   98 (146)
                      -.++||+++|++.+.+.+|-...+..-..-.. --.+..+...    -+..++-.+.++..+-+... ..|.  .|+-|+
T Consensus        33 ~~~DHialRvn~~~~A~~~~~~l~~~G~llSen~INGRPI~l~~L~qPL~~~~~~I~~vELP~P~~K-~Yp~--eGWEHI  109 (185)
T PF06185_consen   33 YEIDHIALRVNSNETAERWKQALLQCGELLSENMINGRPICLFKLNQPLQFGGWSIDCVELPYPKDK-RYPQ--EGWEHI  109 (185)
T ss_dssp             -EEEEEEEE-S-HHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEE---SS---SS---EEEEE
T ss_pred             cCCcEEEEecCCHHHHHHHHHHHHHhChhhhhceeCCeeEEEEEcCCchhcCCeeEEEEEeCCCCCC-CCCC--CCceEE
Confidence            35899999999999999999998866433221 1111111111    12336667777776655431 1222  457899


Q ss_pred             EEEeC
Q 032146           99 CIAIR  103 (146)
Q Consensus        99 ~~~v~  103 (146)
                      -|.++
T Consensus       110 E~Vip  114 (185)
T PF06185_consen  110 EFVIP  114 (185)
T ss_dssp             EEE--
T ss_pred             EEEec
Confidence            99998

; PDB: 1K4N_A.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=91.57  E-value=1.8  Score=26.49  Aligned_cols=47  Identities=11%  Similarity=0.062  Sum_probs=31.4

Q ss_pred             ccEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEECC-CCCeEEEE
Q 032146           95 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDP-DANALEFT  142 (146)
Q Consensus        95 ~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~Dp-dG~~ie~~  142 (146)
                      +.|+++.|.|+++..+.+.+ .|.+......+ ..+++..+ .+..+.+.
T Consensus         3 l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~~l~   51 (120)
T cd07252           3 LGYLGVESSDLDAWRRFATDVLGLQVGDRPED-GALYLRMDDRAWRIAVH   51 (120)
T ss_pred             ccEEEEEeCCHHHHHHHHHhccCceeccCCCC-CeEEEEccCCceEEEEE
Confidence            57999999999999999976 69987654222 23344433 34445443

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=91.52  E-value=1.3  Score=26.85  Aligned_cols=49  Identities=24%  Similarity=0.324  Sum_probs=34.2

Q ss_pred             cEEEEEeCCHHHHHHHHHHC-CCeEeccC--C--CceEEEEECCC---CCeEEEEee
Q 032146           96 RHTCIAIRDVSKLKMILDKA-GISYTLSK--S--GRPAIFTRDPD---ANALEFTQV  144 (146)
Q Consensus        96 ~hl~~~v~d~~~~~~~l~~~-G~~~~~~~--~--g~~~~~~~Dpd---G~~ie~~~~  144 (146)
                      .|+++.|.|+++..+.+.+. |.+.....  .  +...+++..++   +..+++.+.
T Consensus         2 ~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~   58 (121)
T cd07233           2 LHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYN   58 (121)
T ss_pred             eeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEec
Confidence            69999999999999999874 99875432  2  22334555444   567887653

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=91.36  E-value=1.4  Score=26.41  Aligned_cols=46  Identities=13%  Similarity=0.161  Sum_probs=32.9

Q ss_pred             EEEEEeCCHHHHHHHHHH-CCCeEeccC---CCceEEEEECCCC--CeEEEE
Q 032146           97 HTCIAIRDVSKLKMILDK-AGISYTLSK---SGRPAIFTRDPDA--NALEFT  142 (146)
Q Consensus        97 hl~~~v~d~~~~~~~l~~-~G~~~~~~~---~g~~~~~~~DpdG--~~ie~~  142 (146)
                      |+++.|.|+++..+.+.+ .|+++....   .+...+.+.++++  ..+.+.
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   52 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGGFRWVTVAPPGSPETSLVLA   52 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCCCcEEEEEeCCCCCeeEEEEe
Confidence            789999999999999987 799986532   2344555666654  345554

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=91.34  E-value=1.8  Score=26.43  Aligned_cols=47  Identities=6%  Similarity=0.063  Sum_probs=32.9

Q ss_pred             ccEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEECCC-CCeEEEEe
Q 032146           95 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPD-ANALEFTQ  143 (146)
Q Consensus        95 ~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~Dpd-G~~ie~~~  143 (146)
                      +.|+.+.|+|+++..+.+.+ .|..+.....  ..+++...+ +..+.+.+
T Consensus         3 i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~--~~~~l~~~~~~~~l~l~~   51 (125)
T cd07255           3 IGAVTLRVADLERSLAFYQDVLGLEVLERTD--STAVLGTGGKRPLLVLEE   51 (125)
T ss_pred             EEEEEEEECCHHHHHHHHHhccCcEEEEcCC--CEEEEecCCCeEEEEEEe
Confidence            57999999999999999986 6998876532  234444433 45555544

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=91.28  E-value=1.7  Score=29.43  Aligned_cols=56  Identities=21%  Similarity=0.356  Sum_probs=38.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeCC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN   81 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~   81 (146)
                      .+++|+++.|.|++++.+.+.+ .|+++... +......+.+|+.- .+..++|+....
T Consensus       120 ~G~~Hlaf~V~Dvd~~~~~L~~-~Gv~v~~~-p~~~~~~~~~fi~DPdG~~IEl~e~~~  176 (185)
T PLN03042        120 RGFGHIGITVDDVYKACERFEK-LGVEFVKK-PDDGKMKGLAFIKDPDGYWIEIFDLKR  176 (185)
T ss_pred             CCccEEEEEcCCHHHHHHHHHH-CCCeEEeC-CccCCceeEEEEECCCCCEEEEEECCC
Confidence            3799999999999999999877 89887642 22111223344433 456888877544

>PRK10291 glyoxalase I; Provisional

Probab=91.01  E-value=2.5  Score=26.20  Aligned_cols=57  Identities=16%  Similarity=0.132  Sum_probs=37.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeecccc-CCCCCCceEEEEEe-CCeEEEEEeeCC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEAR-PHDKLPYRGAWLWV-GAEMIHLMELPN   81 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~-~~~~~~~~~~~~~~-~~~~~~l~~~~~   81 (146)
                      .+++|+.+.|.|++++.+-.++ .|.++.... +........+|+.- ++..++|+....
T Consensus        64 ~~~~hlaf~V~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         64 TAYGHIALSVDNAAEACEKIRQ-NGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             CCeeEEEEEeCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCCCCEEEEEEccc
Confidence            3688999999999999888866 888776421 21111122344443 466888888653

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=90.32  E-value=2.2  Score=25.99  Aligned_cols=48  Identities=13%  Similarity=0.210  Sum_probs=31.6

Q ss_pred             cEEEEEeCCHHHHHHHHHH----CCCeEeccCCCceEEEEECC-CCCeEEEEee
Q 032146           96 RHTCIAIRDVSKLKMILDK----AGISYTLSKSGRPAIFTRDP-DANALEFTQV  144 (146)
Q Consensus        96 ~hl~~~v~d~~~~~~~l~~----~G~~~~~~~~g~~~~~~~Dp-dG~~ie~~~~  144 (146)
                      .|+.+.|.|+++..+...+    .|.+......+.+ +.+..+ .+..+.+...
T Consensus         2 ~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~~~~-~~~~~~~~~~~~~l~~~   54 (123)
T cd07262           2 DHVTLGVNDLERARAFYDAVLAPLGIKRVMEDGPGA-VGYGKGGGGPDFWVTKP   54 (123)
T ss_pred             cEEEEecCcHHHHHHHHHHHHhhcCceEEeecCCce-eEeccCCCCceEEEecc
Confidence            6999999999999888877    5888764432233 333443 3455666543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>COG3865 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=90.14  E-value=3.6  Score=26.67  Aligned_cols=99  Identities=12%  Similarity=0.068  Sum_probs=57.0

Q ss_pred             eCCHHHHHHHHhhhcCC-eec--cccCCC-----CCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeC-
Q 032146           33 CENLERSLEFYQNILGL-EIN--EARPHD-----KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  103 (146)
Q Consensus        33 v~d~~~~~~FY~~~lg~-~~~--~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~-  103 (146)
                      -.+.+++.+||.++|.= ++.  .+.+.+     ...+-.+.+++++..+..+......    ....... ..+-+.++ 
T Consensus        13 ~~~AeeA~~fY~s~FpdS~i~~i~r~p~~~~~g~~G~Vl~a~F~l~g~~f~~ld~g~~~----~f~fneA-~S~~v~~~~   87 (151)
T COG3865          13 DGNAEEAMNFYLSTFPDSKIIGITRYPEGEPGGKEGKVLVAEFTLNGQSFMALDGGPNT----SFKFNEA-FSFQVACDD   87 (151)
T ss_pred             CCcHHHHHHHHHHhCCcceeeeeeecCCCCCCCCCccEEEEEEEECCeEEEEEcCCCCc----CCCcCcc-EEEEEEcCC
Confidence            38999999999999843 222  222211     2233456677777654433322211    1112222 33445555 


Q ss_pred             --CHHHHHHHHHHCCCeEeccCCCceEEEEECCCCCeEEEE
Q 032146          104 --DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  142 (146)
Q Consensus       104 --d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DpdG~~ie~~  142 (146)
                        .+|.+...|.+.|.      .-....+++|-.|..|.+.
T Consensus        88 q~E~Drlwnal~~~g~------e~~~cgW~kDKfGVSWQi~  122 (151)
T COG3865          88 QEEIDRLWNALSDNGG------EAEACGWLKDKFGVSWQIV  122 (151)
T ss_pred             HHHHHHHHHHHhccCc------chhcceeEecccCcEEEEc
Confidence              46667788888875      2345578889888888775

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=90.10  E-value=1.9  Score=26.04  Aligned_cols=29  Identities=10%  Similarity=0.195  Sum_probs=24.7

Q ss_pred             CccEEEEEeCCHHHHHHHHHHCCCeEecc
Q 032146           94 RDRHTCIAIRDVSKLKMILDKAGISYTLS  122 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~~G~~~~~~  122 (146)
                      ++.|++|.|+|+++..+.+...|..+...
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~~lG~~~~~~   30 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYEAFGLDVREE   30 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHHHhCCcEEee
Confidence            36899999999999999998889887543

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=89.64  E-value=2.4  Score=25.57  Aligned_cols=30  Identities=13%  Similarity=0.205  Sum_probs=25.3

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEeccC
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK  123 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~  123 (146)
                      ++.|+.+.|+|+++..+.+.+ .|.......
T Consensus         3 ~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~   33 (125)
T cd07253           3 RIDHVVLTVADIEATLDFYTRVLGMEVVRFG   33 (125)
T ss_pred             ccceEEEEecCHHHHHHHHHHHhCceeeccc
Confidence            468999999999999999987 798876543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=89.57  E-value=1.8  Score=29.35  Aligned_cols=52  Identities=17%  Similarity=0.160  Sum_probs=37.8

Q ss_pred             CccEEEEEeC--CHHHHHHHHHH-CCCeEeccC------CCceEEEEECCCC-CeEEEEeec
Q 032146           94 RDRHTCIAIR--DVSKLKMILDK-AGISYTLSK------SGRPAIFTRDPDA-NALEFTQVD  145 (146)
Q Consensus        94 ~~~hl~~~v~--d~~~~~~~l~~-~G~~~~~~~------~g~~~~~~~DpdG-~~ie~~~~~  145 (146)
                      .+.|+++.|+  |++++.++..+ .|.+.....      .+.++..+..|+| ..+++.++.
T Consensus         3 ~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~   64 (191)
T cd07250           3 RIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPA   64 (191)
T ss_pred             eeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCC
Confidence            3689999999  99999999865 798764321      2455677788765 457777643

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=88.47  E-value=3.4  Score=24.76  Aligned_cols=38  Identities=8%  Similarity=0.130  Sum_probs=28.9

Q ss_pred             ccEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEECC
Q 032146           95 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDP  134 (146)
Q Consensus        95 ~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~Dp  134 (146)
                      +.|+.|.|.|+++..+.+.+ .|.++.....  ..+++..+
T Consensus         3 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~--~~~~~~~~   41 (117)
T cd07240           3 IAYAELEVPDLERALEFYTDVLGLTVLDRDA--GSVYLRCS   41 (117)
T ss_pred             eeEEEEecCCHHHHHHHHHhccCcEEEeecC--CeEEEecC
Confidence            57999999999999999988 7998876542  23444444

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=88.09  E-value=2.4  Score=25.62  Aligned_cols=27  Identities=19%  Similarity=0.240  Sum_probs=23.8

Q ss_pred             ccEEEEEeCCHHHHHHHHHH-CCCeEec
Q 032146           95 DRHTCIAIRDVSKLKMILDK-AGISYTL  121 (146)
Q Consensus        95 ~~hl~~~v~d~~~~~~~l~~-~G~~~~~  121 (146)
                      +.|+++.|.|+++..+.+.+ .|.++..
T Consensus         2 l~Hi~i~v~d~~~~~~FY~~~lG~~~~~   29 (128)
T PF00903_consen    2 LDHIAIRVKDLEKAIDFYTDVLGFRLVE   29 (128)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTTSEEEE
T ss_pred             eEEEEEEcCCHHHHHHHHHHHhCCcEEe
Confidence            58999999999999999987 6998754

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=87.99  E-value=3.8  Score=24.99  Aligned_cols=50  Identities=12%  Similarity=0.133  Sum_probs=33.2

Q ss_pred             ccEEEEEeCCHHHHHHHHHH-CCCeEeccC---CCceEEEEECCCCCeEEEEee
Q 032146           95 DRHTCIAIRDVSKLKMILDK-AGISYTLSK---SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        95 ~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~---~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +.|+++.|+|+++..+.+.+ .|.++....   ......++..+.+..+++.+.
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~   55 (128)
T TIGR03081         2 IDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEP   55 (128)
T ss_pred             CCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCEEEEEEec
Confidence            57999999999999999974 698875321   112233333344567777653

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=87.59  E-value=5.1  Score=25.06  Aligned_cols=49  Identities=20%  Similarity=0.271  Sum_probs=32.4

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEECC---CCCeEEEEe
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDP---DANALEFTQ  143 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~Dp---dG~~ie~~~  143 (146)
                      .+.|++|.|+|+++..+.+.+ .|.++...... ...++...   ..+.+.+..
T Consensus         3 ~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~~-~~~~~~~~~~~~~~~i~l~~   55 (134)
T cd08360           3 RLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFKG-RGAFLRAAGGGDHHNLFLIK   55 (134)
T ss_pred             eeeEEEEEcCCHHHHHHHHHHhcCCEEEEEecC-cEEEEECCCCCCCcEEEEec
Confidence            368999999999999999976 69987643222 23344433   234666543

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07268 Glo_EDI_BRP_like_4 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=87.50  E-value=6  Score=25.80  Aligned_cols=73  Identities=16%  Similarity=0.171  Sum_probs=45.4

Q ss_pred             eeeEEEEeCCHHHHHHHHhhhcCCeeccc-cCCCCCCceEEEEEe------CCeEEEEEeeCCCCCCCCCCCCCCCccEE
Q 032146           26 VHHVGILCENLERSLEFYQNILGLEINEA-RPHDKLPYRGAWLWV------GAEMIHLMELPNPDPLSGRPEHGGRDRHT   98 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~-~~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~~~~~~~~~hl   98 (146)
                      ++||.++|.+.+.+.+|-...+-+--.-. ..-.+  ...+-+.+      ++-.+..+..+-+... ..|.  .|+-|+
T Consensus         2 ~DHialR~n~~~~A~~w~~~l~~~G~llSen~ING--RPI~l~~L~qPl~~~~~~I~cvELP~P~~k-~Yp~--eGWEHI   76 (149)
T cd07268           2 IDHIALRVNENQTAERWKEGLLQCGELLSENEING--RPIALIKLEKPLQFAGWSISIVELPFPKDK-KYPQ--EGWEHI   76 (149)
T ss_pred             CceEEEeeCCHHHHHHHHHHHHHhchhhhccccCC--eeEEEEEcCCCceeCCcEEEEEEeCCCCCC-CCCC--CCceEE
Confidence            68999999999999999988775533321 11111  12222332      5557777776655331 1222  457899


Q ss_pred             EEEeC
Q 032146           99 CIAIR  103 (146)
Q Consensus        99 ~~~v~  103 (146)
                      -+.++
T Consensus        77 E~Vlp   81 (149)
T cd07268          77 EIVIP   81 (149)
T ss_pred             EEEec
Confidence            99998

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK11700 hypothetical protein; Provisional

Probab=87.03  E-value=7.5  Score=26.40  Aligned_cols=75  Identities=17%  Similarity=0.189  Sum_probs=46.7

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccc-cCCCCCCceEEEEEe------CCeEEEEEeeCCCCCCCCCCCCCCCcc
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEA-RPHDKLPYRGAWLWV------GAEMIHLMELPNPDPLSGRPEHGGRDR   96 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~-~~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~~~~~~~~~   96 (146)
                      -.++||.++|++.+.+.+|-...+-+--.-. ..-++  ...+-+.+      ++-.+..+..+-+... ..|.  .|+-
T Consensus        38 ~~~DHialR~n~~~tAe~w~~~l~~~G~llSen~ING--RPI~l~~L~qPl~~~~w~I~cvELP~P~~k-~Yp~--eGWE  112 (187)
T PRK11700         38 LEADHIALRCNQNETAERWRQGFLQCGELLSENIING--RPICLFELDQPLQVGHWSIDCVELPYPGEK-RYPH--EGWE  112 (187)
T ss_pred             ccCcEEEEeeCCHHHHHHHHHHHHHhchhhhccccCC--eeEEEEEcCCCceeCCcEEEEEEeCCCCCC-CCCC--CCce
Confidence            4589999999999999999988775533321 11111  12222333      4557777776655431 1222  4578


Q ss_pred             EEEEEeC
Q 032146           97 HTCIAIR  103 (146)
Q Consensus        97 hl~~~v~  103 (146)
                      |+-+.++
T Consensus       113 HIElVlp  119 (187)
T PRK11700        113 HIELVLP  119 (187)
T ss_pred             EEEEEec
Confidence            9999998

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=86.35  E-value=5.5  Score=24.23  Aligned_cols=30  Identities=13%  Similarity=0.152  Sum_probs=25.2

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEeccC
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK  123 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~  123 (146)
                      ++.|++|.|+|+++..+.+.+ .|.++....
T Consensus         4 ~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~   34 (122)
T cd07265           4 RPGHVQLRVLDLEEAIKHYREVLGLDEVGRD   34 (122)
T ss_pred             eEeEEEEEeCCHHHHHHHHHhccCCEeeeec
Confidence            368999999999999999976 799876543

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=86.30  E-value=4.8  Score=24.63  Aligned_cols=26  Identities=12%  Similarity=0.280  Sum_probs=22.2

Q ss_pred             cEEEEEeCCHHHHHHHHHHCCCeEec
Q 032146           96 RHTCIAIRDVSKLKMILDKAGISYTL  121 (146)
Q Consensus        96 ~hl~~~v~d~~~~~~~l~~~G~~~~~  121 (146)
                      .++.|.|+|+++..+.....|.+...
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~lGf~~~~   27 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTALGFEFNP   27 (124)
T ss_pred             EEEEeecCCHHHHHHHHHHCCCEEcc
Confidence            46889999999999999888988653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=85.99  E-value=7.2  Score=25.20  Aligned_cols=51  Identities=12%  Similarity=0.150  Sum_probs=34.0

Q ss_pred             CCccEEEEEeCCHHHHHHHHHH-CCCeEeccC-------CCceEEEEE-CCCCCeEEEEe
Q 032146           93 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK-------SGRPAIFTR-DPDANALEFTQ  143 (146)
Q Consensus        93 ~~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~-------~g~~~~~~~-DpdG~~ie~~~  143 (146)
                      .++.|++|.|+|+++..+.+.+ .|.++....       .+....++. ++.++.+.+.+
T Consensus         8 ~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~   67 (154)
T cd07237           8 QGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAE   67 (154)
T ss_pred             CccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEc
Confidence            4579999999999999999976 798864321       122344433 44556666644

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=85.82  E-value=5.9  Score=24.75  Aligned_cols=28  Identities=7%  Similarity=0.010  Sum_probs=23.4

Q ss_pred             ccEEEEEeCCHHHHHHHHHH-CCCeEecc
Q 032146           95 DRHTCIAIRDVSKLKMILDK-AGISYTLS  122 (146)
Q Consensus        95 ~~hl~~~v~d~~~~~~~l~~-~G~~~~~~  122 (146)
                      +.|+++.|+|+++..+.+.+ .|.++...
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~   29 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVL   29 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEecc
Confidence            37999999999999999986 59887543

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=85.41  E-value=5.5  Score=25.49  Aligned_cols=57  Identities=14%  Similarity=0.068  Sum_probs=37.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccC-CCCCCceEEEEEe-CCeEEEEEeeCC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARP-HDKLPYRGAWLWV-GAEMIHLMELPN   81 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~-~~~~~~~~~~~~~-~~~~~~l~~~~~   81 (146)
                      .++.|+.+.|.|++++.+...+ .|.++..... ........+|+.- .+..++|+....
T Consensus        85 ~g~~hi~f~v~dld~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  143 (150)
T TIGR00068        85 NGFGHIAIGVDDVYKACERVRA-LGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKS  143 (150)
T ss_pred             CceeEEEEecCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCCCCEEEEEECCc
Confidence            3688999999999999999977 8887654221 1222223344443 566888877553

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=84.56  E-value=7.2  Score=24.95  Aligned_cols=27  Identities=19%  Similarity=0.290  Sum_probs=23.1

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEe
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYT  120 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~  120 (146)
                      .+.|+.+.|+|+++..+.+.+ .|.++.
T Consensus         4 ~l~Hv~i~V~Dle~s~~FY~~~LG~~~~   31 (144)
T cd07239           4 KISHVVLNSPDVDKTVAFYEDVLGFRVS   31 (144)
T ss_pred             eeeEEEEECCCHHHHHHHHHhcCCCEEE
Confidence            468999999999999999965 698865

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=84.34  E-value=6.7  Score=23.41  Aligned_cols=28  Identities=11%  Similarity=0.057  Sum_probs=23.5

Q ss_pred             cEEEEEeCCHHHHHHHHHH-CCCeEeccC
Q 032146           96 RHTCIAIRDVSKLKMILDK-AGISYTLSK  123 (146)
Q Consensus        96 ~hl~~~v~d~~~~~~~l~~-~G~~~~~~~  123 (146)
                      .|++|.|.|+++..+...+ .|.++....
T Consensus         2 ~hi~l~v~d~~~s~~FY~~~lG~~~~~~~   30 (114)
T cd07247           2 VWFELPTTDPERAKAFYGAVFGWTFEDMG   30 (114)
T ss_pred             EEEEeeCCCHHHHHHHHHhccCceeeecc
Confidence            6999999999999999986 498876543

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=82.12  E-value=5.8  Score=23.34  Aligned_cols=30  Identities=23%  Similarity=0.235  Sum_probs=25.0

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeecc
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINE   53 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~   53 (146)
                      -.+..|+.+.|.|++++.+...+ +|.++..
T Consensus        54 ~~~~~~~~~~v~dv~~~~~~l~~-~G~~~~~   83 (108)
T PF12681_consen   54 PGGGFHLCFEVEDVDALYERLKE-LGAEIVT   83 (108)
T ss_dssp             SSSEEEEEEEESHHHHHHHHHHH-TTSEEEE
T ss_pred             CCceeEEEEEEcCHHHHHHHHHH-CCCeEee
Confidence            34677899999999999999977 7988754

...

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=81.99  E-value=8.9  Score=23.15  Aligned_cols=30  Identities=20%  Similarity=0.222  Sum_probs=25.2

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEeccC
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK  123 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~  123 (146)
                      .+.|+.+.|+|+++..+.+.+ .|.++....
T Consensus         4 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~   34 (121)
T cd07266           4 RLGHVELRVTDLEKSREFYVDVLGLVETEED   34 (121)
T ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEeccC
Confidence            368999999999999999987 799876543

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=81.07  E-value=10  Score=23.29  Aligned_cols=46  Identities=15%  Similarity=0.218  Sum_probs=30.9

Q ss_pred             ccEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEE-CCCCCeEEEE
Q 032146           95 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTR-DPDANALEFT  142 (146)
Q Consensus        95 ~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~-DpdG~~ie~~  142 (146)
                      +.|+++.|.|+++..+.+.+ .|.+......+  ..++. +.+++.+.+.
T Consensus         7 l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~~--~~~l~~~~~~~~i~l~   54 (124)
T cd08361           7 IAYVRLGTRDLAGATRFATDILGLQVAERTAK--ATYFRSDARDHTLVYI   54 (124)
T ss_pred             eeEEEEeeCCHHHHHHHHHhccCceeccCCCC--eEEEEcCCccEEEEEE
Confidence            57999999999999999977 59887544322  33333 3344555443

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	146
3rmu_A	134	Crystal Structure Of Human Methylmalonyl-Coa Epimer		2e-06

>pdb|3RMU|A Chain A, Crystal Structure Of Human Methylmalonyl-Coa Epimerase, Mcee Length = 134

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 14/125 (11%)
Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRG---AWLWVG---AEMIHLMEL 79
           ++HV I   +LE++  FY+NILG +++EA P   LP  G    ++ +G    E++H + L
Sbjct: 6   LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHGVSVVFVNLGNTKMELLHPLGL 62
Query: 80  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIFTRDP 134
            +P     +    G   H CI + +++   M L K  I        +   G+P IF    
Sbjct: 63  DSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPK 122
Query: 135 DANAL 139
           D   +
Sbjct: 123 DCGGV 127

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	146
2p25_A	126	Glyoxalase family protein; structural genomics, MC	1e-30
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	6e-27
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	7e-27
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	8e-24
1nki_A	135	Probable fosfomycin resistance protein; potassium	4e-22
3ghj_A	141	Putative integron gene cassette protein; integron	1e-21
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	5e-21
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	2e-19
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-18
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	8e-18
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	5e-17
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	5e-17
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	2e-16
3huh_A	152	Virulence protein STM3117; structural genomics, ny	3e-16
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	7e-16
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	2e-15
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	3e-15
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	1e-13
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	3e-13
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	5e-13
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	7e-13
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	2e-11
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	4e-05
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-11
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	4e-11
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	6e-05
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	1e-10
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-10
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	3e-10
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-10
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	7e-10
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-09
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	3e-09
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	2e-08
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	6e-08
2i7r_A	118	Conserved domain protein; structural genomics cons	7e-08
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	1e-07
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	1e-07
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	1e-07
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	2e-07
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	2e-07
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	2e-05
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	3e-07
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	3e-07
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	8e-07
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	9e-07
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	9e-07
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	2e-06
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	8e-05
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	6e-06
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	8e-06
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	8e-06
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	1e-05
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	2e-05
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	2e-05
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	3e-05
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-04
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	2e-04
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	2e-04
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	3e-04
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	4e-04
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	4e-04
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	4e-04
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	6e-04
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	8e-04

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  106 bits (266), Expect = 1e-30
 Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 5/123 (4%)

Query: 25  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 84
            +HHV I   N + +  FY   LG E+       +       L +G++ + +        
Sbjct: 5   EIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPA 64

Query: 85  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALE 140
               PE  G  RH    +  + ++   L++ GI     +    +G+   F  DPD   LE
Sbjct: 65  RPSYPEALGL-RHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLE 123

Query: 141 FTQ 143
             +
Sbjct: 124 LHE 126

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 96.7 bits (241), Expect = 6e-27
 Identities = 31/129 (24%), Positives = 44/129 (34%), Gaps = 11/129 (8%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLM-------E 78
           VHHV ++  + ++S EFY N LG E+       K       L  G   + +         
Sbjct: 6   VHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSN 65

Query: 79  LPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAIFTRDP 134
              P      P      RH    + DV   +  L   GI          +G+   F  DP
Sbjct: 66  YCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDP 125

Query: 135 DANALEFTQ 143
           D   LE  +
Sbjct: 126 DGLPLELHE 134

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 96.4 bits (240), Expect = 7e-27
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 13/125 (10%)

Query: 23  VVSVHHVGILC--ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 80
           +  + HV +       E +  FY   +G+E    +P +     G W   G + IH+    
Sbjct: 8   IQGIDHVQVAAPVGCEEEARAFYGETIGMEEIP-KPEELKKRGGCWFKCGNQEIHIGVEQ 66

Query: 81  NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANA 138
           N +P         +  H    +  + + K  L K GI      +       +  DP  N 
Sbjct: 67  NFNP--------AKRAHPAFYVLKIDEFKQELIKQGIEVIDDHARPDVIRFYVSDPFGNR 118

Query: 139 LEFTQ 143
           +EF +
Sbjct: 119 IEFME 123

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 89.1 bits (221), Expect = 8e-24
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 12/122 (9%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
           + S++H+ +   +L++S+ F+  +LGL ++           GA+L  G   + L      
Sbjct: 2   LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT------GAYLTCGDLWVCLSYDEAR 55

Query: 83  DPLSGRPEHGGRDRHTCIAIR--DVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANAL 139
                 P       H    +   D   L   L++AG++    +KS   + +  DPD + L
Sbjct: 56  QY---VPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKL 112

Query: 140 EF 141
           E 
Sbjct: 113 EL 114

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 84.5 bits (209), Expect = 4e-22
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 11/120 (9%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
           +  ++H+ +   +L  S+ FY+++LG  +      +    +GA+L +G+  + L   P  
Sbjct: 2   LTGLNHLTLAVADLPASIAFYRDLLGFRL------EARWDQGAYLELGSLWLCLSREPQY 55

Query: 83  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANALEF 141
               G P          IA  D ++    L   G+     ++S   + +  DPD + LE 
Sbjct: 56  ----GGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEA 111

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 83.5 bits (207), Expect = 1e-21
 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 18/124 (14%)

Query: 25  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 84
            +  V +  +NLE+S +FY  ILG E        +  +   W+   A M+ L E      
Sbjct: 28  GLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARR--WNFLWVSGRAGMVVLQE------ 79

Query: 85  LSGRPEHGGRDRHTCIAI--RDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANA 138
                +   + +H    +   ++  LK  L+  G+S     +       +++  DP+ +A
Sbjct: 80  ----EKENWQQQHFSFRVEKSEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHA 135

Query: 139 LEFT 142
           LEFT
Sbjct: 136 LEFT 139

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 82.2 bits (203), Expect = 5e-21
 Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 13/130 (10%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEI------NEARPHDKLPYRGAWLWVG-AEMIHLME 78
           VHH+ +  ++++ S  FY  ILGL                   + A        ++ L  
Sbjct: 20  VHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFG 79

Query: 79  LPNPDPLSGRPEH-GGRDRHTCIAIRDVSKLKMI--LDKAGISYTLSKSGRP---AIFTR 132
            P   P    PE    R  H    I      + +  + +  I+       RP    ++  
Sbjct: 80  EPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFY 139

Query: 133 DPDANALEFT 142
           DPD   +E  
Sbjct: 140 DPDGFMIEIR 149

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 74.4 bits (183), Expect = 3e-18
 Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 7/124 (5%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
           +  V HV +   +L+ S  +Y  IL  +       D   +       G   I L E    
Sbjct: 3   LSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGV-LPGGLSIVLREHDGG 61

Query: 83  DPLSGRPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYT--LSKSGRPAIFTRDPDAN 137
                     G D H   ++  ++ L ++   L KAG ++T          +  RD D  
Sbjct: 62  GTDLFDETRPGLD-HLSFSVESMTDLDVLEERLAKAGAAFTPTQELPFGWILAFRDADNI 120

Query: 138 ALEF 141
           ALE 
Sbjct: 121 ALEA 124

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 74.0 bits (182), Expect = 8e-18
 Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 15/131 (11%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN- 81
             ++    +  ++L+ +  FY+++ GLE        KLP +  +   G +M+ L +    
Sbjct: 6   PSAIMETALYADDLDAAEAFYRDVFGLE-----MVLKLPGQLVFFKCGRQMLLLFDPQES 60

Query: 82  --PDPLSGRPEHGGRDR-HTCIAIR---DVSKLKMILDKAGI---SYTLSKSGRPAIFTR 132
              D  +  P HG   + H C       +V + K   +   I    Y    +G  +++ R
Sbjct: 61  SRADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIR 120

Query: 133 DPDANALEFTQ 143
           DP  N++E  +
Sbjct: 121 DPAGNSVEVGE 131

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 71.3 bits (175), Expect = 5e-17
 Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 10/128 (7%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP- 84
           ++HV I   +LE++  FY+NILG +++EA P  +      ++ +G   + L+     D  
Sbjct: 6   LNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSP 65

Query: 85  --LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT-----LSKSGRPAIF--TRDPD 135
                +    G   H CI + +++   M L K  I        +   G+P IF   +D  
Sbjct: 66  IAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCG 125

Query: 136 ANALEFTQ 143
              +E  Q
Sbjct: 126 GVLVELEQ 133

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 71.5 bits (175), Expect = 5e-17
 Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 11/124 (8%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPN 81
           +  + H+  +  +LER     + +       A   ++    R  +  +G   + +M+   
Sbjct: 2   IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEK 61

Query: 82  PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDAN 137
                   E         I   D  +    + K G+     +        +I+  D D +
Sbjct: 62  L------AERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNH 115

Query: 138 ALEF 141
             E 
Sbjct: 116 MFEL 119

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 69.8 bits (171), Expect = 2e-16
 Identities = 22/125 (17%), Positives = 49/125 (39%), Gaps = 7/125 (5%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-P 84
           VHH+G   +N++ +L+ ++ +  +E +E    +       ++  G   + L+     D P
Sbjct: 8   VHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSP 67

Query: 85  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS------YTLSKSGRPAIFTRDPDANA 138
           ++   + G    H C  + D+ K    + + G +         +   R   F    D   
Sbjct: 68  INKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGL 127

Query: 139 LEFTQ 143
           +E  +
Sbjct: 128 IELLE 132

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 70.1 bits (171), Expect = 3e-16
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 13/128 (10%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
           +  + H+ +   ++  ++ FY+ +LG      + +         L  GA+ I+L +    
Sbjct: 21  IDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQNR------KALIFGAQKINLHQQEME 74

Query: 83  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 135
                     G      I    ++ +   + +AGIS       R        +I+ RDPD
Sbjct: 75  FEPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPD 134

Query: 136 ANALEFTQ 143
            N +E +Q
Sbjct: 135 GNLIEISQ 142

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 68.3 bits (167), Expect = 7e-16
 Identities = 18/124 (14%), Positives = 41/124 (33%), Gaps = 11/124 (8%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPN 81
           +  + H+ ++ ++L ++  F QNI   E   +         +  +  +    I +ME  +
Sbjct: 2   ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDS 61

Query: 82  PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDAN 137
                   E         I   +V +    +   G+     +        +I+  D D +
Sbjct: 62  L------QERTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNH 115

Query: 138 ALEF 141
             E 
Sbjct: 116 LFEL 119

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 66.9 bits (163), Expect = 2e-15
 Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 10/125 (8%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDP 84
           + HV +   NLE+  +FY    G   N+   +    +   +L       + +M   +   
Sbjct: 4   IEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTG 63

Query: 85  LSGRPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYT----LSKSGRPAIFTRDPDAN 137
            +     G    H  I+      +  +   L + G +      ++  G       DP+ N
Sbjct: 64  KTTGENLGW--AHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGN 121

Query: 138 ALEFT 142
            +E T
Sbjct: 122 RIEIT 126

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 66.9 bits (163), Expect = 3e-15
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 13/126 (10%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
           +  + H+ +   ++  +  FY+ +LG++                L  G + I+L +L N 
Sbjct: 8   ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAG------RIALEFGHQKINLHQLGNE 61

Query: 83  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR-------PAIFTRDPD 135
                +    G      I    +S     ++  G++       R        + + RDPD
Sbjct: 62  FEPKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPD 121

Query: 136 ANALEF 141
            N +E 
Sbjct: 122 GNLIEV 127

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 63.3 bits (154), Expect = 1e-13
 Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 9/127 (7%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-- 83
           + H+GI   +++  L FY   L L++           + A+L +G   I L+E  + +  
Sbjct: 9   LDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESP 68

Query: 84  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-----TLSKSGRPAIF--TRDPDA 136
                 + G    H  I ++ + +    + + G+            G    F   R    
Sbjct: 69  IAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARG 128

Query: 137 NALEFTQ 143
              EF +
Sbjct: 129 VLYEFCE 135

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 62.0 bits (150), Expect = 3e-13
 Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 13/124 (10%)

Query: 25  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 84
            + H+ +  ++++ +  FY  ILG+E+   +           L  G +  +L E+     
Sbjct: 27  RLDHIVMTVKSIKDTTMFYSKILGMEVMTFKEDR------KALCFGDQKFNLHEVGKEFE 80

Query: 85  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPDAN 137
                   G      I    + ++   L    +        R        +I+ RDPD N
Sbjct: 81  PKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRN 140

Query: 138 ALEF 141
            +E 
Sbjct: 141 LIEV 144

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 61.0 bits (148), Expect = 5e-13
 Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 13/126 (10%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 85
           +HHV I  ++LE S+ F+  +LG    E         RG     G   +  ++  +    
Sbjct: 21  LHHVEINVDHLEESIAFWDWLLGELGYE-DYQS--WSRGKSYKHGKTYLVFVQTEDRFQT 77

Query: 86  SGRPEHGGRDRHTCIAIRD---VSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 135
                      H          V +L   L + G                  A+F  DP+
Sbjct: 78  PTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPN 137

Query: 136 ANALEF 141
              +E 
Sbjct: 138 RIKVEI 143

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 61.0 bits (148), Expect = 7e-13
 Identities = 18/142 (12%), Positives = 47/142 (33%), Gaps = 23/142 (16%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEI-----NEARPHDKLP------YRGAWLWV-- 69
           ++ + +V I+ E+L+ ++ F++  +GL +      E     ++          A +    
Sbjct: 9   LLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD 67

Query: 70  GAEMIHLMELPNPDPLSGRPEHGGRD---RHTCIAIRDVSKLKMILDKAGISYTLSKSGR 126
           G   I L     P  ++                  + D+ ++   L K G    + +  +
Sbjct: 68  GHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAE-LVGEVVQ 126

Query: 127 P-----AIFTRDPDANALEFTQ 143
                   + R  +   +   +
Sbjct: 127 YENSYRLCYIRGVEGILIGLAE 148

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 59.3 bits (143), Expect = 2e-11
 Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 9/127 (7%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEI-----NEARPHDKLPYRGAWLWVGAEMIHLMELP 80
           +HH+  +  + + + +FY  +LGL +     N   P     Y G     G     +   P
Sbjct: 9   IHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGN--EGGKPGTIITFFP 66

Query: 81  NPDPLSGRPEHGGRDRHT-CIAIRDVSKLKMILDKAGISYTLSKS-GRPAIFTRDPDANA 138
                 G    G     +  +    ++  +  L+K  + YT  +  G   +   DP    
Sbjct: 67  WAGARQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYTKIERFGEQYVEFDDPHGLH 126

Query: 139 LEFTQVD 145
           LE  + +
Sbjct: 127 LEIVERE 133

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 41.2 bits (96), Expect = 4e-05
 Identities = 21/122 (17%), Positives = 31/122 (25%), Gaps = 14/122 (11%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 85
                +L E  +++ +  +NI+GLE                      +I L   P     
Sbjct: 154 FGGATLLSEQPDKTADLLENIMGLERVGKEGDFVRYRSAGD---IGNVIDLKLTPIGRGQ 210

Query: 86  SGRPEHGGRDRHTCIAIRDVSKLKMILDK---AGISYTLSKSGR---PAIFTRDPDANAL 139
            G     G   H      D              G   T     R    AI+ R+      
Sbjct: 211 MGA----GTVHHIAWRANDDEDQLDWQRYIASHGYGVT-PVRDRNYFNAIYFREHGEILF 265

Query: 140 EF 141
           E 
Sbjct: 266 EI 267

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 57.0 bits (137), Expect = 2e-11
 Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 21/129 (16%)

Query: 31  ILCENLERSLEFYQNILGLEINEARPHDKLPYR---GAWLWVGAEMIHLMELPNPDPLSG 87
           + C ++  S  F+ ++LG E+   RP ++  Y    G  +     M+  +   +   LSG
Sbjct: 11  LYCFDINVSQSFFVDVLGFEVKYERPDEEFVYLTLDGVDV-----MLEGIAGKSRKWLSG 65

Query: 88  RPEHG-GRDRHTCIAIRDVSKLKMILDKAGISYTL------------SKSGRPAIFTRDP 134
             E   G   +    + D+  L   ++++                  S + +     + P
Sbjct: 66  DLEFPLGSGVNFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTP 125

Query: 135 DANALEFTQ 143
           D     F Q
Sbjct: 126 DGYLFRFCQ 134

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 58.1 bits (140), Expect = 4e-11
 Identities = 21/129 (16%), Positives = 43/129 (33%), Gaps = 11/129 (8%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL----PN 81
            HH+ ++ +N   +  FY+N+LGL   +   +   P     L+ G +             
Sbjct: 31  HHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPS-MYHLFYGDKTGSPGTELSFFEI 89

Query: 82  PDPLSGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYT--LSKSGRPAIFTRDPDA 136
           P                 + +     L   K   +K  + ++   + + RPA+   D + 
Sbjct: 90  PLVGRTYRGTNA-ITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEG 148

Query: 137 NALEFTQVD 145
             L     +
Sbjct: 149 LRLVLLVSN 157

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 40.4 bits (94), Expect = 6e-05
 Identities = 15/123 (12%), Positives = 40/123 (32%), Gaps = 13/123 (10%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 85
           +  V +    L++       I G          +      +  +  E    + +   D  
Sbjct: 181 MGSVELTVRRLDKMASTLTEIFGY-----TEVSRNDQEAIFQSIKGEAFGEIVVKYLDGP 235

Query: 86  SGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYTLSKSGR---PAIFTRDPDANAL 139
           + +P  G    H  I +++ ++L   +  + + G   +     R    +++ R+ +    
Sbjct: 236 TEKPGRGS-IHHLAIRVKNDAELAYWEEQVKQRGFHSS-GIIDRFYFKSLYFRESNGILF 293

Query: 140 EFT 142
           E  
Sbjct: 294 EIA 296

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 54.9 bits (132), Expect = 1e-10
 Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 8/121 (6%)

Query: 27  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 86
            +      ++ RS  FY++ LGL+I E      L   G  +  G  +   +   + D   
Sbjct: 10  VNPIPFVRDINRSKSFYRDRLGLKILEDFGSFVLFETGFAIHEGRSLEETIWRTSSDA-- 67

Query: 87  GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY----TLSKSGRPAIFTRDPDANALEFT 142
            +  +G R+        DV      +    +           G+      DPD +A+E  
Sbjct: 68  -QEAYGRRNMLLYFEHADVDAAFQDI-APHVELIHPLERQAWGQRVFRFYDPDGHAIEVG 125

Query: 143 Q 143
           +
Sbjct: 126 E 126

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 54.2 bits (130), Expect = 3e-10
 Identities = 23/129 (17%), Positives = 36/129 (27%), Gaps = 11/129 (8%)

Query: 25  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVG---AEMIHLMELP 80
            + +V I   ++     FYQ + G +  E+               +G    E   LM+L 
Sbjct: 8   DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQLA 67

Query: 81  NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDA 136
                SG                 V KL  +   AG +   +              DP+ 
Sbjct: 68  QFSETSGIKFLLN---FDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPER 124

Query: 137 NALEFTQVD 145
           N      V 
Sbjct: 125 NVFRINNVL 133

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 53.2 bits (128), Expect = 3e-10
 Identities = 14/118 (11%), Positives = 33/118 (27%), Gaps = 16/118 (13%)

Query: 27  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 86
            H+ +   ++  + EF +   GL  +            A+  +      ++ L     + 
Sbjct: 5   KHLNLTVADVVAAREFLEKYFGLTCSGT-------RGNAFAVMRDNDGFILTL-----MK 52

Query: 87  GRPEHGGRDRHTCIAIRDVSKLKMILDK---AGISYTLSKSGRP-AIFTRDPDANALE 140
           G+     +  H         ++  I  +    G      K       +   P    +E
Sbjct: 53  GKEVQYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIE 110

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 53.2 bits (127), Expect = 5e-10
 Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 16/125 (12%)

Query: 25  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 84
            V H+ I   +L+ + +FY   LG ++    P           +    + HL +  + + 
Sbjct: 9   DVFHLAIPARDLDEAYDFYVTKLGCKLARRYPD----RITLDFFGDQLVCHLSDRWDREV 64

Query: 85  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR--------PAIFTRDPDA 136
                  G     T    +    L  +  + GI +    S R           F  DP  
Sbjct: 65  SMYPRHFG----ITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSN 120

Query: 137 NALEF 141
           N LEF
Sbjct: 121 NLLEF 125

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 54.7 bits (131), Expect = 7e-10
 Identities = 22/129 (17%), Positives = 39/129 (30%), Gaps = 25/129 (19%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
           + S+  + +    L+R L FY N+LG +    +           + +G   I        
Sbjct: 24  MTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQFRA---- 73

Query: 83  DPLSGRPEHGGRDRHTCIAI--RDVSKLKMILDKAGISYTLSKSGRP--------AIFTR 132
              +          H  I I      + K  L   G   T +   +         + +  
Sbjct: 74  ---AADGTKPF--YHIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVE 128

Query: 133 DPDANALEF 141
           DP  N +E 
Sbjct: 129 DPSGNIIEL 137

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 52.4 bits (125), Expect = 1e-09
 Identities = 18/126 (14%), Positives = 37/126 (29%), Gaps = 8/126 (6%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 85
           +H   +  ++  ++  FY   LG  +    P     +         +   L+  P+    
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAA 86

Query: 86  SG---RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANA 138
                             A+ D++     L   G+ +T           AI   D   N 
Sbjct: 87  VTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAIL-DDTCGNL 145

Query: 139 LEFTQV 144
           ++  Q+
Sbjct: 146 IQLMQI 151

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 50.7 bits (121), Expect = 3e-09
 Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 15/128 (11%)

Query: 24  VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 83
           + +  + I   +L+  L FY+ I+G +   A   DK                L  + NP 
Sbjct: 5   LLITSITINTSHLQGMLGFYR-IIGFQF-TASKVDKGSEVHR-AVHNGVEFSLYSIQNPQ 61

Query: 84  PLSGRPEHGGRDRHTCIAIRDVSK-LKMILDKAGISYTL----SKSGRPAIFTRDPDANA 138
                             I D+ K ++ ++   G    L       G+ AI   DPD ++
Sbjct: 62  R------SQIPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKKAIV-LDPDGHS 114

Query: 139 LEFTQVDG 146
           +E  +++G
Sbjct: 115 IELCELEG 122

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 49.1 bits (117), Expect = 2e-08
 Identities = 20/122 (16%), Positives = 41/122 (33%), Gaps = 19/122 (15%)

Query: 28  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 87
              +   +L  +LEFY+ +L   +  A   +          +   ++          ++G
Sbjct: 9   LSRLYVADLNPALEFYEELLETPV--AMRFEIPQTGVELAQISTILL----------IAG 56

Query: 88  RPEHGGRDRHTCIAIR--DVSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANALEF 141
             E     R+T        + K K  L++ G           +GR     R  D + +E+
Sbjct: 57  SEEALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMTV-RHSDGSVIEY 115

Query: 142 TQ 143
            +
Sbjct: 116 VE 117

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 47.9 bits (114), Expect = 6e-08
 Identities = 21/142 (14%), Positives = 46/142 (32%), Gaps = 20/142 (14%)

Query: 22  GVVSVHHVGILCENLERSLEFYQNILGLE-----INEARPHDKLPYRG---------AWL 67
            + +   +GI+  ++E SL+ Y    G+E       +        + G         A+ 
Sbjct: 16  DMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFF 75

Query: 68  WVGAEMIHLMELPNPD--PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS--YTLSK 123
            +G   + L+E             ++G    H    ++D+ +    L + G+        
Sbjct: 76  ELGPLQLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDF 135

Query: 124 SGRPAIF--TRDPDANALEFTQ 143
            G    +  T       +E  +
Sbjct: 136 EGGRYAYIDTLRALKVMIELLE 157

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 47.1 bits (112), Expect = 7e-08
 Identities = 18/121 (14%), Positives = 42/121 (34%), Gaps = 15/121 (12%)

Query: 28  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 87
            + I+  N+ +     ++IL  + + A          A   +G+  + L +         
Sbjct: 8   QLDIIVSNVPQVCADLEHILDKKADYANDG------FAQFTIGSHCLMLSQNH-----LV 56

Query: 88  RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEFTQ 143
             E+        I + DV +    L++ GI      +       ++  + P    L+F +
Sbjct: 57  PLENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYR 116

Query: 144 V 144
           +
Sbjct: 117 M 117

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 47.1 bits (112), Expect = 1e-07
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 18/121 (14%)

Query: 31  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 90
           +   +++ +L  + + LG E+     +       A+L +    + L+E P          
Sbjct: 13  LHIPDMQEALTLFCDTLGFELKYRHSNY------AYLELSGCGLRLLEEPARKI----IP 62

Query: 91  HGGRDRHTCIAIRDV----SKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEFT 142
            G      CI + D+    +KL   L+             P        R PD + L FT
Sbjct: 63  DGIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFT 122

Query: 143 Q 143
            
Sbjct: 123 A 123

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score = 47.0 bits (112), Expect = 1e-07
 Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 14/115 (12%)

Query: 28  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE------MIHLMELPN 81
           H  I   +L+RS++FY   LG++    R  D    +   +++G        ++ L     
Sbjct: 11  HTMIRVGDLDRSIKFYTERLGMK--VLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 68

Query: 82  PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL-SKSGRPAIFTRDPD 135
                   +H     H  I + DV +L   + K  +      +SG  A F  DPD
Sbjct: 69  VTS----YKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGFMA-FVVDPD 118

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 46.9 bits (111), Expect = 1e-07
 Identities = 21/125 (16%), Positives = 33/125 (26%), Gaps = 14/125 (11%)

Query: 25  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 84
            V  + +   +LE S  FY    G       P         +  +   ++    + N   
Sbjct: 5   QVAVITLGIGDLEASARFYGEGFGWAPVFRNPE------IIFYQMNGFVLATWLVQNLQE 58

Query: 85  LSGRPEHGGRDRHT----CIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDA 136
             G                 A  +V+ L   L  AG          P      +  DPD 
Sbjct: 59  DVGVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDG 118

Query: 137 NALEF 141
           +  E 
Sbjct: 119 HIWEI 123

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 46.6 bits (110), Expect = 2e-07
 Identities = 20/145 (13%), Positives = 48/145 (33%), Gaps = 11/145 (7%)

Query: 7   ILKKEPIRDSDKIDYGVVSVHHVGIL-CENLERSLEFYQNILGLEINEARPHDKLPYRGA 65
           +  +  I+ S   + G V   +  +   +++++++++++ ILG   +     D+      
Sbjct: 2   LENERLIKMSRFSERGYVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYG 61

Query: 66  WLWVGA---EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS 122
            ++       + HL          G P  G       + I  +  L   + + G      
Sbjct: 62  CVFDYPSEVAVAHLTPFRGFHLFKGEPIKGV---AGFMMIEGIDALHKYVKENGWDQISD 118

Query: 123 KSGRP----AIFTRDPDANALEFTQ 143
              +P           D   L F +
Sbjct: 119 IYTQPWGARECSITTTDGCILRFFE 143

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 47.9 bits (114), Expect = 2e-07
 Identities = 18/132 (13%), Positives = 40/132 (30%), Gaps = 24/132 (18%)

Query: 20  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 79
           + GV+   HV +   ++ ++LE Y  +LGL   +     ++  +                
Sbjct: 2   NKGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKA--------------W 47

Query: 80  PNPDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-----RPAI 129
              D  S             +  +      + +L+  L   G +     +G        +
Sbjct: 48  TEVDKFSLVLREADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRV 107

Query: 130 FTRDPDANALEF 141
             + P  +  E 
Sbjct: 108 RFQAPSGHHFEL 119

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 41.7 bits (98), Expect = 2e-05
 Identities = 18/132 (13%), Positives = 37/132 (28%), Gaps = 22/132 (16%)

Query: 22  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 81
             V   H  +  + L  + + +  +LG  + E    +       +L +  +   +  + +
Sbjct: 147 AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHH 206

Query: 82  PDPLSGRPEHGGRDRHTCIA---IRDVSKLKMILDKAG--ISYTLSKSGR----PAIFT- 131
           P+         GR  H         D+ +   ++      I        R          
Sbjct: 207 PEK--------GRLHHVSFHLETWEDLLRAADLISMTDTSIDIGP---TRHGLTHGKTIY 255

Query: 132 -RDPDANALEFT 142
             DP  N  E  
Sbjct: 256 FFDPSGNRNEVF 267

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 46.2 bits (109), Expect = 3e-07
 Identities = 17/126 (13%), Positives = 41/126 (32%), Gaps = 14/126 (11%)

Query: 27  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 86
               +  +N   S +FY+ +LG++  E+ P         ++      + L      +P  
Sbjct: 27  DFTILYVDNPPASTQFYKALLGVDPVESSPT-----FSLFVLANGMKLGLWSRHTVEP-- 79

Query: 87  GRPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYTLSKSGRP---AIFTRDPDANALE 140
            +    G        + + +++         +G++     +           DPD++ L 
Sbjct: 80  -KASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLR 138

Query: 141 FTQVDG 146
                G
Sbjct: 139 VYAFAG 144

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score = 46.6 bits (110), Expect = 3e-07
 Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 27/136 (19%)

Query: 27  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-------------------RGAWL 67
               +  ++ ++SL+FY  +LGL + +      + +                   + AW 
Sbjct: 33  QQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWT 92

Query: 68  WVGAEMIHLMELPNPDPLSGRPEHGGRD-----RHTCIAIRDVSKLKMILDKAGISYT-L 121
           +     + L      +    +  H G        H  IA+ DV       ++ G+ +   
Sbjct: 93  FSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKK 152

Query: 122 SKSGRPAI--FTRDPD 135
              G+     F +DPD
Sbjct: 153 PDDGKMKGLAFIQDPD 168

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 44.7 bits (105), Expect = 8e-07
 Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 8/118 (6%)

Query: 27  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 86
           + V    +N  +S EFY+N+L  +  E+ P         ++      + L      +P +
Sbjct: 8   NLVLFYVKNPAKSEEFYKNLLDTQPIESSPT-----FAMFVMKTGLRLGLWAQEEIEPKA 62

Query: 87  GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP---AIFTRDPDANALEF 141
            +   G        +   V ++        IS     +           DPD + L  
Sbjct: 63  HQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRI 120

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score = 44.3 bits (105), Expect = 9e-07
 Identities = 24/113 (21%), Positives = 49/113 (43%), Gaps = 5/113 (4%)

Query: 28  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 87
           H  +   +L+RS++FY  +LG+++     + +  Y  A++  G E    +     +    
Sbjct: 5   HTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVD 64

Query: 88  RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAI-FTRDPD 135
           + E G    H  +++ + ++    + + G + T      K G   I F  DPD
Sbjct: 65  KYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPD 117

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 18/129 (13%), Positives = 39/129 (30%), Gaps = 23/129 (17%)

Query: 21  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 80
           + +  +    +     + +L+F+   LG+ +   R    +  RG                
Sbjct: 7   FDIAHLARAELFSPKPQETLDFFTKFLGMYVTH-REGQSVYLRG--------------YE 51

Query: 81  NPDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKS---GRPAIFTR 132
           +P P S +            A+R      + +    L    +  T S+           +
Sbjct: 52  DPYPWSLKITEAPEAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQ 111

Query: 133 DPDANALEF 141
            PD + L+ 
Sbjct: 112 SPDGHNLQL 120

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 40.4 bits (94), Expect = 8e-05
 Identities = 18/128 (14%), Positives = 38/128 (29%), Gaps = 15/128 (11%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
           V  + H+ ++  ++    + ++  LG    E R  D     GAW+        +  + + 
Sbjct: 151 VKRIDHLNLMSSDVTAVKDSFERHLGFRTTE-RVVDGNVEIGAWMSSNLLGHEVACMRDM 209

Query: 83  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAG--ISYTLSKSGR----PAIFT--RDP 134
               G+  H      T    +       +       I        +     + F    +P
Sbjct: 210 TGGHGKLHHLAFFYGT---GQHNIDAVEMFRDYDIQIEAGP---DKHGITQSQFLYVFEP 263

Query: 135 DANALEFT 142
             N +E  
Sbjct: 264 GGNRIELF 271

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 42.3 bits (99), Expect = 6e-06
 Identities = 18/138 (13%), Positives = 40/138 (28%), Gaps = 17/138 (12%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV------GAEMIHL 76
            + + HV   C + + + ++YQ   G        + +       +            + +
Sbjct: 7   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 66

Query: 77  MELPNPD-PLSGRPEHGGRDR---HTCIAIRDVSKLKMILDKAGISY-----TLSKSGRP 127
           M   N +  ++             H    + D+  +   L + G+        L   G  
Sbjct: 67  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 126

Query: 128 AIF--TRDPDANALEFTQ 143
             F   +      +E TQ
Sbjct: 127 INFMHPKSGKGVLIELTQ 144

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 43.0 bits (101), Expect = 8e-06
 Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 25/129 (19%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
           +V   ++ I+  +L +S EFY ++LGL + E    + +  R               L   
Sbjct: 15  IVRCAYMEIVVTDLAKSREFYVDVLGLHVTE-EDENTIYLRS--------------LEEF 59

Query: 83  DPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYT-----LSKSGRPAIFTR 132
              +     G        A R     +V   +    + G          +K    ++   
Sbjct: 60  IHHNLVLRQGPIAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVE 119

Query: 133 DPDANALEF 141
           DP     EF
Sbjct: 120 DPLGFPYEF 128

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 41.7 bits (98), Expect = 8e-06
 Identities = 20/124 (16%), Positives = 33/124 (26%), Gaps = 16/124 (12%)

Query: 24  VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 83
           V      I      R+  FY +ILG+ +  A  H              E    +      
Sbjct: 6   VRRVVANIATPEPARAQAFYGDILGMPV--AMDHG----WIVTHASPLEAHAQVSFAREG 59

Query: 84  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANAL 139
                   G       I + +  ++   + KAG+               +F RDP    +
Sbjct: 60  G------SGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLI 113

Query: 140 EFTQ 143
               
Sbjct: 114 NILS 117

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 42.5 bits (100), Expect = 1e-05
 Identities = 21/130 (16%), Positives = 38/130 (29%), Gaps = 24/130 (18%)

Query: 22  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 81
           GV+   H  +   NLE  + FY+N+LGL         ++ ++                  
Sbjct: 5   GVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQGRVYFKC--------------WDE 50

Query: 82  PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSGRP-----AIFT 131
            D                   +      + KL   L   G++ T   +G        +  
Sbjct: 51  RDHSCYIIREADTAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRF 110

Query: 132 RDPDANALEF 141
             P  + +E 
Sbjct: 111 ELPSGHLIEL 120

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 42.4 bits (99), Expect = 2e-05
 Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 25/129 (19%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
           ++   +  ++  +L +S  FY ++LGL ++     +++  R                   
Sbjct: 15  ILRCAYAELVVTDLAKSRNFYVDVLGLHVSY-EDENQIYLRSFE--------------EF 59

Query: 83  DPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-----RPAIFTR 132
              +     G       +A R     DV K +    + G      K G       A+   
Sbjct: 60  IHHNLVLTKGPVAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVE 119

Query: 133 DPDANALEF 141
           DP     EF
Sbjct: 120 DPLGFPYEF 128

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 41.0 bits (96), Expect = 2e-05
 Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 9/122 (7%)

Query: 27  HHVGILCENLERSLEFYQNILGLEI---NEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 83
               ++ E++ +SLEFY+  LG+EI    ++ PH +    G    +  + +  +   +P+
Sbjct: 6   SLFAVVVEDMAKSLEFYRK-LGVEIPAEADSAPHTEAVLDGGIR-LAWDTVETVRSYDPE 63

Query: 84  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANAL 139
             +    H             V K    L  AG    L              +DPD N +
Sbjct: 64  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVV 123

Query: 140 EF 141
           + 
Sbjct: 124 DL 125

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A Length = 124

 Score = 40.3 bits (94), Expect = 3e-05
 Identities = 13/114 (11%), Positives = 28/114 (24%), Gaps = 9/114 (7%)

Query: 33  CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG 92
             ++  ++EF+ + LG         D      A +      + +  + +           
Sbjct: 13  ARDVAEAVEFWTDRLGFSR--VFVEDDF----AGVVRDDVTLFISAVQDQVVPDNTQAWV 66

Query: 93  GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP---AIFTRDPDANALEFTQ 143
                  +       +      A          +P       RDP  N + F  
Sbjct: 67  WVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA 120

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 39.9 bits (93), Expect = 1e-04
 Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 24/130 (18%)

Query: 22  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 81
            V  + +VG   ++ +    FY ++ GLE       +   ++                  
Sbjct: 5   RVTEIRYVGYGVKDFDAEKAFYADVWGLEPVG-EDANNAWFKAQG--------------A 49

Query: 82  PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDA 136
            +    +      +R   IA+      DV  L+  ++ AG          PA+       
Sbjct: 50  DEHHVVQLRRADENRIDVIALAADSRSDVDALRASVEAAGCKVA----SEPAVLATPGGG 105

Query: 137 NALEFTQVDG 146
               F   DG
Sbjct: 106 YGFRFFSPDG 115

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 38.4 bits (89), Expect = 2e-04
 Identities = 21/118 (17%), Positives = 33/118 (27%), Gaps = 9/118 (7%)

Query: 35  NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR 94
            L+  + FY+  L L+           Y G    +     HL E                
Sbjct: 21  QLDEIIRFYEEGLCLKR-IGEFSQHNGYDGVMFGLPHADYHL-EF-TQYEGGSTAPVPHP 77

Query: 95  DRHTCIAIRDVSKLKMI---LDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVDG 146
           D      + +  +L  I   L   G     S++       +   DPD   + F    G
Sbjct: 78  DSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKG 135

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 38.8 bits (90), Expect = 2e-04
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 28/132 (21%)

Query: 22  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 81
            V  + ++G+   NL+   ++   I+G+++ +    D++ Y                   
Sbjct: 3   KVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGEDDRI-YLRMD--------------- 46

Query: 82  PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-------RPAI 129
                      G D    I  R     ++ +L   L  AGI + ++             +
Sbjct: 47  RWHHRIVLHADGSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLV 106

Query: 130 FTRDPDANALEF 141
              DP  N  E 
Sbjct: 107 KLHDPGGNPTEI 118

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 37.7 bits (87), Expect = 3e-04
 Identities = 18/132 (13%), Positives = 39/132 (29%), Gaps = 19/132 (14%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
            ++ +   +   N+ERS +FY+ I   E     P      R        + +  +     
Sbjct: 11  TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSGDALFAIWSGGE 64

Query: 83  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDK------AGISYTLSKSGRP---AIFTRD 133
           +P++  P          I +     +  + ++        I                  D
Sbjct: 65  EPVAEIPRFS----EIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLISD 120

Query: 134 PDANALEFTQVD 145
           PD + +    +D
Sbjct: 121 PDGHIIRVCPLD 132

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 37.2 bits (86), Expect = 4e-04
 Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 29/126 (23%)

Query: 33  CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV--GAEMIHLMELPNPDPLSGRPE 90
             + + +  FY+  LG  I              W+ +  G  M+     P  DPL+    
Sbjct: 11  SRDFDSTAAFYER-LGFGIVFRDAG--------WMILQRGDLMLEFFAHPGLDPLASWFS 61

Query: 91  HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR----------PAIFT-RDPDANAL 139
                   C+ + D+++        GI  T S   R            +    DPD   L
Sbjct: 62  -------CCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLL 114

Query: 140 EFTQVD 145
              Q +
Sbjct: 115 RLIQNE 120

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 38.1 bits (88), Expect = 4e-04
 Identities = 22/132 (16%), Positives = 41/132 (31%), Gaps = 28/132 (21%)

Query: 22  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 81
            V+ + ++GI  ++ +    F  ++LGL++ +    D+   R                 +
Sbjct: 6   AVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGEKDRFYLRM----------------D 49

Query: 82  PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKS-------GRPAI 129
                    H G+D    +  R     +   L   L  AG    +              +
Sbjct: 50  YWHHRIVVHHNGQDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLM 109

Query: 130 FTRDPDANALEF 141
            T DP  N  E 
Sbjct: 110 KTEDPGGNPTEI 121

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A Length = 122

 Score = 37.1 bits (86), Expect = 4e-04
 Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 27/123 (21%)

Query: 33  CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG 92
             ++  ++ F+ + LG E  +    D   +  A +  G   +H+    +           
Sbjct: 13  AVDVPANVSFWVDTLGFEK-DFGDRD---F--AGVRRGDIRLHISRTEHQIVADN----- 61

Query: 93  GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAI-----------FT-RDPDANALE 140
                  I + D   L     +A  +   + +  PA+           F  RDP  N + 
Sbjct: 62  ---TSAWIEVTDPDALHEEWARAVSTD-YADTSGPAMTPVGESPAGREFAVRDPAGNCVH 117

Query: 141 FTQ 143
           FT 
Sbjct: 118 FTA 120

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 36.7 bits (85), Expect = 6e-04
 Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 9/120 (7%)

Query: 29  VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR 88
           V +   + +R++++   + G  +   +P        A L  G  ++ +     P  +S  
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIGTIRH-ADLDTGGGIVMVRRTGEPYTVS-- 62

Query: 89  PEHGGRDRHTCIAIRDVSKLKMILDKAG--ISYTLSKS---GRPAIFTRDPDANALEFTQ 143
              G   +   + + DV +  M    AG  I   L       R  +  RD + +  EFT+
Sbjct: 63  CAGGHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQYLV-RDLEGHLWEFTR 121

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 37.3 bits (86), Expect = 8e-04
 Identities = 17/131 (12%), Positives = 37/131 (28%), Gaps = 29/131 (22%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
           +  + ++G   +++     F    +GL        D   YR                 + 
Sbjct: 2   IERLGYLGFAVKDVPAWDHFLTKSVGLMAAG-SAGDAALYRA----------------DQ 44

Query: 83  DPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKS-------GRPAIF 130
                  + G  D      +       + ++   L +AG+++T               + 
Sbjct: 45  RAWRIAVQPGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLC 104

Query: 131 TRDPDANALEF 141
            +DP    LE 
Sbjct: 105 LQDPFGLPLEI 115

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	146
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.94
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.93
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.92
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.92
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.92
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.92
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.92
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.92
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.92
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.92
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.91
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.91
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.91
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.91
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.9
3ghj_A	141	Putative integron gene cassette protein; integron	99.9
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.9
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.9
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.9
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.9
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.9
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.9
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.89
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.89
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.89
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.89
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.89
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.89
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.88
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.88
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.88
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.88
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.88
2i7r_A	118	Conserved domain protein; structural genomics cons	99.87
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.87
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.87
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.87
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.87
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.87
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.87
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.87
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.86
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.86
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.86
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.86
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.85
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.85
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.85
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.84
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.83
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.82
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.81
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.81
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.81
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.79
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.79
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.79
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.78
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.78
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.78
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.77
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.77
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.77
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.77
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.76
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.76
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.76
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.76
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.75
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.75
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.75
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.75
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.74
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.74
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.74
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.74
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.73
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.73
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.72
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.71
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.71
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.69
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.69
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.69
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.69
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.67
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.67
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.66
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.63
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.61
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.61
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.6
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.59
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.55
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.52
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.52
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.51
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.51
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.5
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.41
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.38
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.38
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.37
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.34
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.7
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	98.41
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	98.3
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	97.33
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	97.19
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	95.7
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	95.49
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	95.3
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	95.08
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	95.04
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	94.99
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	94.91
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	94.61
3ghj_A	141	Putative integron gene cassette protein; integron	94.61
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	94.56
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	94.52
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	94.47
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	93.94
2p25_A	126	Glyoxalase family protein; structural genomics, MC	93.63
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	93.21
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	92.94
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	92.82
3huh_A	152	Virulence protein STM3117; structural genomics, ny	92.7
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	92.46
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	92.34
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	92.09
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	92.06
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	91.46
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	90.32
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	90.3
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	90.24
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	89.95
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	89.94
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	89.84
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	89.03
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	88.73
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	88.7
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	88.45
1k4n_A	192	Protein EC4020, protein YECM; structural genomics,	88.4
1nki_A	135	Probable fosfomycin resistance protein; potassium	87.72
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	87.32
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	87.01
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	86.71
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	86.05
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	85.18
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	84.21
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	84.13
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	83.82
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	83.59
3iuz_A	340	Putative glyoxalase superfamily protein; struct ge	83.07
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	82.06
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	80.53

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.94  E-value=6.4e-26  Score=143.25  Aligned_cols=123  Identities=25%  Similarity=0.329  Sum_probs=97.3

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEe-------eCCCCCCCCCCCCCC
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLME-------LPNPDPLSGRPEHGG   93 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~   93 (146)
                      |++.+++||.|.|+|++++++||+++||+++..+..........+++..++..++|+.       ..........+....
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWPREAC   80 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETTEEEEEEECCTTSTTCCCCCCCCCSSSCCS
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCCeEEEEEecccccccccCCccccCCCCCCC
Confidence            4678999999999999999999999999999876543344444677888999999988       333222222222455


Q ss_pred             CccEEEEEeCCHHHHHHHHHHCCCeEecc----CCCceEEEEECCCCCeEEEEe
Q 032146           94 RDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DpdG~~ie~~~  143 (146)
                      +..|++|.|+|+++++++|+++|+++...    ..+.+.+++.|||||.|||+|
T Consensus        81 g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           81 GLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEEEEEC
T ss_pred             CeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEEEEeC
Confidence            67899999999999999999999998643    346789999999999999986

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.93  E-value=2e-24  Score=139.92  Aligned_cols=134  Identities=18%  Similarity=0.210  Sum_probs=100.1

Q ss_pred             cccCCCCCCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCC------CCceEEEEEeCC-eEEEEEeeCCCCC
Q 032146           12 PIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK------LPYRGAWLWVGA-EMIHLMELPNPDP   84 (146)
Q Consensus        12 ~~~~~~~~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~------~~~~~~~~~~~~-~~~~l~~~~~~~~   84 (146)
                      .......+++++.+|+||.|.|+|++++++||+++|||++........      .....+++..++ ..++|+......+
T Consensus         6 ~~~~~~~~~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~   85 (156)
T 3kol_A            6 QSVNSVLAPGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPELSP   85 (156)
T ss_dssp             -CCCCCCCTTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTTCCC
T ss_pred             ceeccccCccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCCCCc
Confidence            334445566788999999999999999999999999999986322111      111347777755 7888888765432


Q ss_pred             CCCCC-CCCCCccEEEEEeC--CHHHHHHHHHHCCCeEeccC---CCceEEEEECCCCCeEEEEeec
Q 032146           85 LSGRP-EHGGRDRHTCIAIR--DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        85 ~~~~~-~~~~~~~hl~~~v~--d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      ....+ ....+..|++|.|+  |+++++++|+++|+++...+   ..++.+|++|||||.|||++.+
T Consensus        86 ~~~~~~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  152 (156)
T 3kol_A           86 PDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPDGFMIEIRCDP  152 (156)
T ss_dssp             SSSSTTCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CCEEEEEECTTSCEEEEEECC
T ss_pred             CCCCCCCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCccEEEEECCCCCEEEEEecC
Confidence            22112 23456799999999  99999999999999986432   3456999999999999999876

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.92  E-value=1.8e-24  Score=135.45  Aligned_cols=122  Identities=20%  Similarity=0.250  Sum_probs=92.6

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      |++.+++|+.|.|+|++++++||+++||+++.............+++..++..++|+.......... .....+..|++|
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~-~~~~~g~~~~~~   79 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPS-YPEALGLRHLAF   79 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTEEEEEEECTTCCCCCC-SSCCSSCCCEEE
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCeEEEEEeccCCCCCCC-CCCCccceEEEE
Confidence            4578899999999999999999999999998764321111223356777877888887544322211 122345689999


Q ss_pred             EeCCHHHHHHHHHHCCCeEecc----CCCceEEEEECCCCCeEEEEe
Q 032146          101 AIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       101 ~v~d~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DpdG~~ie~~~  143 (146)
                      .|+|+++++++|+++|+++...    ..|.+.+|++|||||.|||+|
T Consensus        80 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           80 KVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             ECSCHHHHHHHHHHTTCCCCCCEECTTTCCEEEEEECTTCCEEEEEC
T ss_pred             EeCCHHHHHHHHHHcCCccccccccCCCCcEEEEEECCCCCEEEeeC
Confidence            9999999999999999987543    246688999999999999986

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.92  E-value=8.7e-25  Score=138.56  Aligned_cols=122  Identities=17%  Similarity=0.263  Sum_probs=95.4

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeecccc-CCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCC-CCCCCCccEEE
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEAR-PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR-PEHGGRDRHTC   99 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~hl~   99 (146)
                      ++.+++|++|.|+|++++++||+ +|||++..+. .........+++..++..++|+.......+... ...+.+.+|++
T Consensus         4 M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~g~~hia   82 (133)
T 3hdp_A            4 MSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPINKTIKKGSTPYHIC   82 (133)
T ss_dssp             CCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETTEEEEEEEESSTTCTHHHHTTTSCEEEEEE
T ss_pred             cceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCCEEEEEEecCCCCChHHHHHhcCCceEEEE
Confidence            45789999999999999999999 9999987642 222334567788888999999986554322100 01145678999


Q ss_pred             EEeCCHHHHHHHHHHCCCeEecc------CCCceEEEEECCCCCeEEEEee
Q 032146          100 IAIRDVSKLKMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       100 ~~v~d~~~~~~~l~~~G~~~~~~------~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      |.|+|+++++++|+++|+++...      .+|.+.+|++|||||+|||+|.
T Consensus        83 f~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           83 YEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            99999999999999999997542      2567889999999999999983

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.92  E-value=2.7e-24  Score=140.46  Aligned_cols=133  Identities=17%  Similarity=0.194  Sum_probs=102.7

Q ss_pred             ccCCCCCCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCC--------------CCCceEEEEEeCCeEEEEEe
Q 032146           13 IRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--------------KLPYRGAWLWVGAEMIHLME   78 (146)
Q Consensus        13 ~~~~~~~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~   78 (146)
                      ..++..++..+.+++||+|.|+|++++++||+++||+++..+....              ......+++..++..++|+.
T Consensus         7 ~~~~~~~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~leL~~   86 (159)
T 3gm5_A            7 HHSMSKNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIE   86 (159)
T ss_dssp             --CCCSSCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETTEEEEEEE
T ss_pred             cccccccccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCCEEEEEEE
Confidence            3445667788899999999999999999999999999977543221              13456688888999999998


Q ss_pred             eCCCCCCCCC--CCCCCCccEEEEEeCCHHHHHHHHHHCCCeEecc--CCCceEEEEECCC--CCeEEEEeec
Q 032146           79 LPNPDPLSGR--PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS--KSGRPAIFTRDPD--ANALEFTQVD  145 (146)
Q Consensus        79 ~~~~~~~~~~--~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~--~~g~~~~~~~Dpd--G~~ie~~~~~  145 (146)
                      ..........  ...+.+..|+||.|+|+++++++|+++|+++...  ..+.+.+|+.|||  |++|||+|.+
T Consensus        87 ~~~~~~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~~g~~~~~~~dpd~~G~~iEl~e~~  159 (159)
T 3gm5_A           87 PDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDFEGGRYAYIDTLRALKVMIELLENY  159 (159)
T ss_dssp             ECSSSCHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEETTEEEEEESCHHHHSSEEEEEEEC
T ss_pred             ECCCCChhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccccCCeeEEEEeccccCcEEEEEEecC
Confidence            7543211000  0124567899999999999999999999998643  2578999999999  9999999974

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.92  E-value=7.8e-24  Score=133.76  Aligned_cols=120  Identities=17%  Similarity=0.268  Sum_probs=95.5

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEE
Q 032146           20 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC   99 (146)
Q Consensus        20 ~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~   99 (146)
                      .|++.+++|+.|.|+|++++++||+++|||++.....      ..+++..++..+.|........+. ......+..|++
T Consensus         5 ~m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~   77 (133)
T 3ey7_A            5 LMKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA------GRIALEFGHQKINLHQLGNEFEPK-AQNVRVGSADLC   77 (133)
T ss_dssp             CCCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETTEEEEEEETTSCCSSC-CTTCCTTCCEEE
T ss_pred             EeEecccCEEEEEECCHHHHHHHHHHccCceEEEecC------CeEEEEcCCEEEEEEcCCCCcccc-CCCCCCCccEEE
Confidence            3678899999999999999999999999999987632      346788888888888765443221 222334568999


Q ss_pred             EEeCC-HHHHHHHHHHCCCeEeccC----C---CceEEEEECCCCCeEEEEeecC
Q 032146          100 IAIRD-VSKLKMILDKAGISYTLSK----S---GRPAIFTRDPDANALEFTQVDG  146 (146)
Q Consensus       100 ~~v~d-~~~~~~~l~~~G~~~~~~~----~---g~~~~~~~DpdG~~ie~~~~~~  146 (146)
                      |.|+| +++++++|+++|+++...+    .   +.+.++++|||||+|||++++.
T Consensus        78 ~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           78 FITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             EECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             EEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            99996 9999999999999975432    1   1388999999999999999763

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.92  E-value=1.3e-23  Score=132.10  Aligned_cols=118  Identities=20%  Similarity=0.291  Sum_probs=93.4

Q ss_pred             CceeeeeeeEEEEe--CCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccE
Q 032146           20 DYGVVSVHHVGILC--ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRH   97 (146)
Q Consensus        20 ~~~~~~l~hv~l~v--~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~h   97 (146)
                      .|++.+++|+.|.|  +|++++++||+++||+++..+.... .....+|+..++..++|.......        ..+..|
T Consensus         5 ~m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~l~l~~~~~~~--------~~~~~~   75 (126)
T 2qqz_A            5 RNYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEEL-KKRGGCWFKCGNQEIHIGVEQNFN--------PAKRAH   75 (126)
T ss_dssp             CCCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGG-GGGCCEEEEETTEEEEEEECTTCC--------CCSSSC
T ss_pred             hcccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccc-cCCCceEEEeCCEEEEEEecCCCC--------CCCceE
Confidence            36788999999999  8999999999999999987643210 011247788888888887642211        134689


Q ss_pred             EEEEeCCHHHHHHHHHHCCCeEeccC--CCceEEEEECCCCCeEEEEeecC
Q 032146           98 TCIAIRDVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVDG  146 (146)
Q Consensus        98 l~~~v~d~~~~~~~l~~~G~~~~~~~--~g~~~~~~~DpdG~~ie~~~~~~  146 (146)
                      ++|.|+|+++++++|+++|+++..++  ++.+.++++|||||.|||.++.+
T Consensus        76 ~~f~v~d~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  126 (126)
T 2qqz_A           76 PAFYVLKIDEFKQELIKQGIEVIDDHARPDVIRFYVSDPFGNRIEFMENKN  126 (126)
T ss_dssp             EEEEETTHHHHHHHHHHTTCCCEEECSSTTEEEEEEECTTSCEEEEEEECC
T ss_pred             EEEEcCCHHHHHHHHHHcCCCccCCCCCCCeeEEEEECCCCCEEEEEeCCC
Confidence            99999999999999999999976543  46789999999999999999763

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.92  E-value=3.1e-24  Score=135.48  Aligned_cols=123  Identities=26%  Similarity=0.414  Sum_probs=95.2

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCC---CCCCCCccEE
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR---PEHGGRDRHT   98 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~hl   98 (146)
                      ++.+++|++|.|+|++++++||+++||+++..+...+......+++..++..++|+.......+...   .....+..|+
T Consensus         2 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~hi   81 (134)
T 3rmu_A            2 MLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNKAGGMHHI   81 (134)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSSEEEEEEECSTTCTTHHHHHHCTTCEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCEEEEEEecCCCCchhhhhhhccCCCCceEE
Confidence            4789999999999999999999999999988654433334567888888889999876654322100   0233557999


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEeccC-----CCceEEEE--ECCCCCeEEEEee
Q 032146           99 CIAIRDVSKLKMILDKAGISYTLSK-----SGRPAIFT--RDPDANALEFTQV  144 (146)
Q Consensus        99 ~~~v~d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~--~DpdG~~ie~~~~  144 (146)
                      +|.|+|+++++++|+++|+++..++     .+.+.+++  +|||||.|||+|.
T Consensus        82 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           82 CIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            9999999999999999999975432     34556666  8999999999973

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.92  E-value=6.1e-24  Score=136.64  Aligned_cols=122  Identities=20%  Similarity=0.271  Sum_probs=92.6

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC----eEEEEEeeCCCCCCCCCCCCCCC
Q 032146           19 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGR   94 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~   94 (146)
                      +.|++.+++|+.|.|+|++++++||+++|||++......+......+++..++    ..++|+.......    ...+.+
T Consensus         2 ~~m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~----~~~~~~   77 (144)
T 2c21_A            2 SHMPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTS----YKHDEA   77 (144)
T ss_dssp             ----CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCC----CCCCSS
T ss_pred             CCCccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCC----CCCCCC
Confidence            45778999999999999999999999999999976543222233456777764    6788877654221    122345


Q ss_pred             ccEEEEEeCCHHHHHHHHHHCCCeEeccCCCceEE-EEECCCCCeEEEEeec
Q 032146           95 DRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAI-FTRDPDANALEFTQVD  145 (146)
Q Consensus        95 ~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~g~~~~-~~~DpdG~~ie~~~~~  145 (146)
                      ..|++|.|+|+++++++|+++|+++..+ .+.+.+ |+.|||||.|||++..
T Consensus        78 ~~h~~f~v~d~~~~~~~l~~~G~~~~~~-~g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           78 YGHIAIGVEDVKELVADMRKHDVPIDYE-DESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEE-CSSSSEEEEECTTSCEEEEEEHH
T ss_pred             ceEEEEEeCCHHHHHHHHHHCCCEEecc-CCcEEEEEEECCCCCEEEEEEcC
Confidence            6899999999999999999999998776 565555 9999999999999853

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.92  E-value=2e-23  Score=135.26  Aligned_cols=124  Identities=20%  Similarity=0.317  Sum_probs=93.0

Q ss_pred             CCCCCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCc
Q 032146           16 SDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRD   95 (146)
Q Consensus        16 ~~~~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   95 (146)
                      .+...|++.+++||.|.|+|++++++||+++|||++....+      ..+++..++..++|........+. ......+.
T Consensus        14 ~~~~~m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~~~-~~~~~~g~   86 (152)
T 3huh_A           14 HESIQMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGAQKINLHQQEMEFEPK-ASRPTPGS   86 (152)
T ss_dssp             ------CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT------TEEEEEETTEEEEEEETTBCCSSC-CSSCCTTC
T ss_pred             hhcCCcccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC------CeEEEEeCCeEEEEeccCCcCCCc-CcCCCCCc
Confidence            34556789999999999999999999999999999988632      357788888888888765432211 12223456


Q ss_pred             cEEEEEeC-CHHHHHHHHHHCCCeEeccC----C--C-ceEEEEECCCCCeEEEEeecC
Q 032146           96 RHTCIAIR-DVSKLKMILDKAGISYTLSK----S--G-RPAIFTRDPDANALEFTQVDG  146 (146)
Q Consensus        96 ~hl~~~v~-d~~~~~~~l~~~G~~~~~~~----~--g-~~~~~~~DpdG~~ie~~~~~~  146 (146)
                      .|++|.++ |+++++++|+++|+++...+    .  + .+.+|+.|||||+||+.+..+
T Consensus        87 ~hi~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  145 (152)
T 3huh_A           87 ADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVE  145 (152)
T ss_dssp             CEEEEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC--
T ss_pred             cEEEEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEeccc
Confidence            89999998 99999999999999875432    1  1 488999999999999998753

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.91  E-value=9.1e-24  Score=134.55  Aligned_cols=124  Identities=23%  Similarity=0.188  Sum_probs=93.0

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      |++.+++|+.|.|+|++++++||+++||+++..+..........+++. ++..++|........+. ......+..|++|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~-~~~~~~g~~h~~f   78 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-GGLSIVLREHDGGGTDL-FDETRPGLDHLSF   78 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-TSCEEEEEEETTCSSSC-CCTTSSEEEEEEE
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-CCCEEEEEeCCCCcccC-CCCCCCCcceEEE
Confidence            568899999999999999999999999999986544221122334455 77788888875442211 1123345689999


Q ss_pred             Ee---CCHHHHHHHHHHCCCeEeccC--CCceEEEEECCCCCeEEEEeecC
Q 032146          101 AI---RDVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVDG  146 (146)
Q Consensus       101 ~v---~d~~~~~~~l~~~G~~~~~~~--~g~~~~~~~DpdG~~ie~~~~~~  146 (146)
                      .|   +|+++++++|+++|+.+..+.  ..++.+|++|||||+|||.+..+
T Consensus        79 ~v~~~~d~~~~~~~l~~~G~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           79 SVESMTDLDVLEERLAKAGAAFTPTQELPFGWILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCBCCCEEETTEEEEEEECTTCCEEEEEEECT
T ss_pred             EeCCHHHHHHHHHHHHHCCCcccCccccCCceEEEEECCCCCEEEEEEcCC
Confidence            99   799999999999999876432  23488999999999999998764

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.91  E-value=2.4e-24  Score=141.16  Aligned_cols=126  Identities=18%  Similarity=0.281  Sum_probs=96.8

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCC--CCCCCCccEE
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR--PEHGGRDRHT   98 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~hl   98 (146)
                      +++.+++||+|.|+|++++++||+++||+++..+..........+++..++..++|+.......+...  ...+.+..|+
T Consensus         4 ~~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~Hi   83 (161)
T 3oa4_A            4 EKSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIAKFIQKRGEGIHHI   83 (161)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHCSEEEEE
T ss_pred             cccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCCeEEEEEeECCCCChHHHHhhcCCCCeEEE
Confidence            35689999999999999999999999999988754433344567888889999999987654321100  0123567899


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEecc-C----CCceEEEE--ECCCCCeEEEEeecC
Q 032146           99 CIAIRDVSKLKMILDKAGISYTLS-K----SGRPAIFT--RDPDANALEFTQVDG  146 (146)
Q Consensus        99 ~~~v~d~~~~~~~l~~~G~~~~~~-~----~g~~~~~~--~DpdG~~ie~~~~~~  146 (146)
                      +|.|+|+++++++|+++|+.+... +    .|.+.+|+  +|||||+|||++.++
T Consensus        84 af~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~  138 (161)
T 3oa4_A           84 AIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKE  138 (161)
T ss_dssp             EEECSCHHHHHHHHHHTTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCC
T ss_pred             EEEECCHHHHHHHHHHCCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCC
Confidence            999999999999999999998654 2    24556666  499999999999763

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.91  E-value=4.9e-23  Score=129.19  Aligned_cols=118  Identities=19%  Similarity=0.279  Sum_probs=91.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEe
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  102 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v  102 (146)
                      .+++|+.|.|+|++++++||+++||+++.............+++.. ++..++|+..+.....+  .....+..|++|.|
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~--~~~~~g~~hi~~~v   79 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKT--TGENLGWAHIAIST   79 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEETTCCCCC--CSSCSSCCCEEEEC
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecCCCCCCC--CcCCCceEEEEEEc
Confidence            3689999999999999999999999999875332223345567776 45688888876543321  12345569999999


Q ss_pred             CC---HHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEe
Q 032146          103 RD---VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       103 ~d---~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~  143 (146)
                      +|   +++++++|+++|+++...+    .+.+.++++|||||+|||+.
T Consensus        80 ~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~  127 (127)
T 3e5d_A           80 GTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEITW  127 (127)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEEC
T ss_pred             CCHHHHHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEEeC
Confidence            98   8899999999999986532    45688999999999999973

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.90  E-value=1.8e-24  Score=140.95  Aligned_cols=120  Identities=15%  Similarity=0.205  Sum_probs=81.7

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CC-eEEEEEeeCCCCCCCC---CCCCCCCccEE
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA-EMIHLMELPNPDPLSG---RPEHGGRDRHT   98 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~-~~~~l~~~~~~~~~~~---~~~~~~~~~hl   98 (146)
                      ++|+|+.|.|+|+++|++||+++|||++..+.+...  .+...+.. ++ ....+.......+...   ....+.+..|+
T Consensus        25 Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~l  102 (155)
T 4g6x_A           25 MRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGA--DRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIPAA  102 (155)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCCSE
T ss_pred             eEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCC--ceEEEEeccCCCcceEEEeccCCCccccccccccccCCceEE
Confidence            478999999999999999999999999876544222  12222222 11 1222222111111100   00112445799


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEeccC---CCceEEEEECCCCCeEEEEeec
Q 032146           99 CIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        99 ~~~v~d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      +|.|+|+++++++|+++|+++..++   ++++.++|+|||||+|||+|.+
T Consensus       103 ~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A          103 SFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEEECSSCEEEEEECSSSCEEEEEEC-
T ss_pred             EeeechhhhhhhHHhcCCcEEeeCCEEcCCeEEEEEECCCCCEEEEEEEC
Confidence            9999999999999999999986533   4568899999999999999974

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.90  E-value=9.6e-23  Score=130.85  Aligned_cols=117  Identities=27%  Similarity=0.443  Sum_probs=87.4

Q ss_pred             cCCCCCCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeC--CeEEEEEeeCCCCCCCCCCCC
Q 032146           14 RDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEH   91 (146)
Q Consensus        14 ~~~~~~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~   91 (146)
                      +..++.+|++.+++||.|.|+|++++++||+++|||++....+..    ..+++..+  +..++|+.....         
T Consensus        17 ~~~~~~~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~----~~~~~~~~~~~~~l~l~~~~~~---------   83 (141)
T 3ghj_A           17 LYFQGVPMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSAR----RWNFLWVSGRAGMVVLQEEKEN---------   83 (141)
T ss_dssp             ---------CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTT----TEEEEEETTTTEEEEEEECCSS---------
T ss_pred             hhhccCceeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCC----cEEEEEecCCCcEEEEeccCCC---------
Confidence            334557788999999999999999999999999999998764321    34666665  467777765221         


Q ss_pred             CCCccEEEEEeC--CHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEee
Q 032146           92 GGRDRHTCIAIR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        92 ~~~~~hl~~~v~--d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                       .+..|++|.|+  |+++++++|+++|+++..+.    .+.+.+|++|||||.|||++.
T Consensus        84 -~~~~h~~~~v~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  141 (141)
T 3ghj_A           84 -WQQQHFSFRVEKSEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALEFTAL  141 (141)
T ss_dssp             -CCCCEEEEEECGGGHHHHHHHHHHTTCCCEEEEEEGGGTEEEEEEECTTCCEEEEEEC
T ss_pred             -CCCceEEEEEeHHHHHHHHHHHHHCCCeEeCCcccCCCCceEEEEECCCCCEEEEEEC
Confidence             23589999998  99999999999999986332    356899999999999999863

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.90  E-value=2.8e-22  Score=126.93  Aligned_cols=117  Identities=21%  Similarity=0.344  Sum_probs=88.9

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC----eEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      +++|+.|.|+|++++++||+++||+++.............+++..++    ..++|........    ...+.+..|++|
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~~~~~   77 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK----YELGTAYGHIAL   77 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCC----CCCCSSEEEEEE
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCc----ccCCCCccEEEE
Confidence            68999999999999999999999999987543222333456677653    6788876433221    122345679999


Q ss_pred             EeCCHHHHHHHHHHCCCeEeccC----CCc-eEEEEECCCCCeEEEEeec
Q 032146          101 AIRDVSKLKMILDKAGISYTLSK----SGR-PAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       101 ~v~d~~~~~~~l~~~G~~~~~~~----~g~-~~~~~~DpdG~~ie~~~~~  145 (146)
                      .|+|+++++++|+++|+++..++    .|. +.++++|||||.|||++..
T Consensus        78 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  127 (135)
T 1f9z_A           78 SVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  127 (135)
T ss_dssp             ECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-
T ss_pred             EeCCHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecC
Confidence            99999999999999999986532    343 6789999999999999865

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.90  E-value=3.9e-22  Score=126.86  Aligned_cols=112  Identities=22%  Similarity=0.369  Sum_probs=91.3

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEE
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  101 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~  101 (146)
                      |+.+++|+.|.|+|++++++||+++||+++....+      ..+++..++..+.|......      +....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~------~~~~~~~~h~~~~   68 (135)
T 1nki_A            1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQY------GGPAADYTHYAFG   68 (135)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETTEEEEEEECTTC------CCCCSSSCEEEEE
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC------CceEEecCCEEEEEEeCCCC------CCCCCCcceEEEE
Confidence            36899999999999999999999999999987543      24677888888888765321      1222446899999


Q ss_pred             eC--CHHHHHHHHHHCCCeEeccC-CCceEEEEECCCCCeEEEEeec
Q 032146          102 IR--DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       102 v~--d~~~~~~~l~~~G~~~~~~~-~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |+  |+++++++|+++|+++..++ .+++.+++.|||||.|||.+..
T Consensus        69 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           69 IAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEESCC
T ss_pred             ccHHHHHHHHHHHHHCCCceecCCCCCeEEEEEECCCCCEEEEEECC
Confidence            98  99999999999999986543 4678999999999999999864

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.90  E-value=1.1e-22  Score=131.32  Aligned_cols=119  Identities=17%  Similarity=0.267  Sum_probs=91.0

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEE
Q 032146           19 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   98 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl   98 (146)
                      ++|++.+|+||.|.|+|++++++||+++|||++....+      ..+++..++..+.|........+... ....+..|+
T Consensus        21 ~~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~g~~~l~l~~~~~~~~~~~~-~~~~g~~~~   93 (147)
T 3zw5_A           21 QSMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFGDQKFNLHEVGKEFEPKAA-HPVPGSLDI   93 (147)
T ss_dssp             HHTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETTEEEEEEETTSCCSSCCS-SCCTTCCEE
T ss_pred             cceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC------CceEEEECCcEEEEEEcCCCcCcccC-CCCCCCceE
Confidence            45678999999999999999999999999999986432      23567778888888775443221111 122345789


Q ss_pred             EEEeC-CHHHHHHHHHHCCCeEeccC-----C--CceEEEEECCCCCeEEEEee
Q 032146           99 CIAIR-DVSKLKMILDKAGISYTLSK-----S--GRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        99 ~~~v~-d~~~~~~~l~~~G~~~~~~~-----~--g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +|.++ |+++++++|+++|+++...+     .  ..+.+|++|||||+|||.++
T Consensus        94 ~~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~y  147 (147)
T 3zw5_A           94 CLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSNY  147 (147)
T ss_dssp             EEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             EEEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEecC
Confidence            99886 99999999999999876322     1  13689999999999999875

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.90  E-value=3.2e-22  Score=128.15  Aligned_cols=115  Identities=23%  Similarity=0.366  Sum_probs=92.5

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEE
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  101 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~  101 (146)
                      |+.+++|+.|.|+|++++++||+++||+++....+      ..+++..++..+.|........   .+....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~~hi~~~   71 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQY---VPPQESDYTHYAFT   71 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETTEEEEEEECTTCCC---CCGGGSCSCEEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC------CcEEEEECCEEEEEEECCCCCC---CCCCCCCceEEEEE
Confidence            36789999999999999999999999999987543      2467888888888877543211   12223456899999


Q ss_pred             eC--CHHHHHHHHHHCCCeEeccC-CCceEEEEECCCCCeEEEEeec
Q 032146          102 IR--DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       102 v~--d~~~~~~~l~~~G~~~~~~~-~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |+  |+++++++|+++|+++..++ .+++.++++|||||.|||++.+
T Consensus        72 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           72 VAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEECC
T ss_pred             eCHHHHHHHHHHHHHCCCeEeccCCCceeEEEEECCCCCEEEEEECc
Confidence            97  99999999999999986543 4678999999999999999864

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.90  E-value=2.9e-22  Score=129.43  Aligned_cols=124  Identities=14%  Similarity=0.218  Sum_probs=92.9

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCC-----------CCCCceEEEEEeCC--eEEEEEeeCCCCCC-C
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH-----------DKLPYRGAWLWVGA--EMIHLMELPNPDPL-S   86 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~-----------~~~~~~~~~~~~~~--~~~~l~~~~~~~~~-~   86 (146)
                      +++.+++|+.|.|+|++++++||++ |||++......           .......+++..++  ..++|+........ .
T Consensus         7 ~~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~   85 (153)
T 1ss4_A            7 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIAD   85 (153)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCB
T ss_pred             ccccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCccc
Confidence            4678999999999999999999999 99998754321           11233456777643  68888775322211 0


Q ss_pred             --CCCCCCCCccEEEEEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeec
Q 032146           87 --GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        87 --~~~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                        ..+....+..|++|.|+|+++++++|+++|+++..++    ++.+.+|+.|||||.|||++..
T Consensus        86 ~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           86 HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEEC
T ss_pred             ccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceEEEEEECCCCCEEEEEecc
Confidence              1122334567999999999999999999999986543    4678899999999999999874

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.90  E-value=1.9e-22  Score=134.87  Aligned_cols=125  Identities=15%  Similarity=0.199  Sum_probs=93.8

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC-------------------eEEEEEeeCC
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-------------------EMIHLMELPN   81 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~l~~~~~   81 (146)
                      ....+++|++|.|+|++++++||+++|||++..+..........+++..++                   ..++|+....
T Consensus        30 ~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  109 (187)
T 3vw9_A           30 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG  109 (187)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETT
T ss_pred             cceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecC
Confidence            345689999999999999999999999999987655444445566666543                   5788865543


Q ss_pred             CCCCC-CC----CCCCCCccEEEEEeCCHHHHHHHHHHCCCeEeccC---CCceEEEEECCCCCeEEEEeec
Q 032146           82 PDPLS-GR----PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        82 ~~~~~-~~----~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      ..... ..    .....+..|++|.|+|+++++++|+++|+++...+   ...+.+|++|||||+|||+|+.
T Consensus       110 ~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          110 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             GGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECGG
T ss_pred             CCCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcceEEEEECCCCCEEEEEEcc
Confidence            22111 01    11224668999999999999999999999987654   2345689999999999999875

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.89  E-value=7e-22  Score=125.28  Aligned_cols=115  Identities=19%  Similarity=0.136  Sum_probs=88.6

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeCCCCCCCCCCCCCCCccEE
Q 032146           20 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHT   98 (146)
Q Consensus        20 ~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hl   98 (146)
                      +..+.+++|+.|.|+|++++++||+++|||++....+      ..+.+.. ++..+.|+.....     .+....+..|+
T Consensus         8 ~~~~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~l~l~~~~~~-----~~~~~~~~~~~   76 (132)
T 3sk2_A            8 AGPTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSGDALFAIWSGGEE-----PVAEIPRFSEI   76 (132)
T ss_dssp             CCCCCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS------SEEEEECSTTCEEEEESSSCC-----CCTTSCCCEEE
T ss_pred             CCCcceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC------CEEEEEcCCCcEEEEEeCCCC-----CcCCCCCcceE
Confidence            3446799999999999999999999999999877543      2344544 4578888775511     11222345899


Q ss_pred             EEEeCC---HHHHHHHHHH---CCCeEeccC---CCceEEEEECCCCCeEEEEeec
Q 032146           99 CIAIRD---VSKLKMILDK---AGISYTLSK---SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        99 ~~~v~d---~~~~~~~l~~---~G~~~~~~~---~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      +|.|+|   +++++++|++   +|+++..++   ..++.+++.|||||+|||.+++
T Consensus        77 ~~~v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g~~~~~~DPdGn~iel~~~d  132 (132)
T 3sk2_A           77 GIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLISDPDGHIIRVCPLD  132 (132)
T ss_dssp             EEEESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTEEEEEEECTTCCEEEEEECC
T ss_pred             EEEeCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCceEEEEEECCCCCEEEEEeCC
Confidence            999986   9999999999   999986432   2238999999999999999874

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.89  E-value=3.9e-22  Score=125.91  Aligned_cols=120  Identities=22%  Similarity=0.259  Sum_probs=89.2

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeC--CeEEEEEeeCCCCCCCCCCCCCCCcc
Q 032146           19 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDR   96 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~   96 (146)
                      ..+++.+++|+.|.|+|++++++||+++||+++........ ....+.+..+  +..+++........    +...++..
T Consensus         7 ~~~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~   81 (133)
T 4hc5_A            7 GSLMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDP-NMRFVTVVPPGAQTQVALGLPSWYED----GRKPGGYT   81 (133)
T ss_dssp             -CCSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEET-TEEEEEEECTTCSCEEEEECGGGCSS----CCCSCEEE
T ss_pred             ccccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCC-CceEEEEECCCCceEEEEecCccccc----ccCCCCeE
Confidence            44678899999999999999999999999999987543111 1122334433  34677766543211    11124568


Q ss_pred             EEEEEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEe
Q 032146           97 HTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus        97 hl~~~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~  143 (146)
                      |++|.|+|+++++++|+++|+++..++    .|.+.++++|||||.|||+|
T Consensus        82 ~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           82 GISLITRDIDEAYKTLTERGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCEESSSCEECTTSCEEEEEECTTCEEEEEEE
T ss_pred             EEEEEeCCHHHHHHHHHHCCCEeecCCCcCCCCCEEEEEECCCCCEEEEEe
Confidence            999999999999999999999986432    45699999999999999987

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.89  E-value=6.2e-22  Score=125.30  Aligned_cols=116  Identities=16%  Similarity=0.266  Sum_probs=88.0

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCc-eEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-RGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      |+.+++|+.|.|+|++++++||+++||+++....+...... ...++..++..+++...+..      +  ..+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~------~--~~~~~h~~~   72 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDSL------Q--ERTYNHIAF   72 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEECC-----CCCSSCEEEEEETTEEEEEEECSSC------C--CCCSCEEEE
T ss_pred             CCceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecCCcccccCCceEEEeCCEEEEEecCCCC------C--CCCeeEEEE
Confidence            36789999999999999999999999999876543211100 11267778888888764321      1  234689999


Q ss_pred             EeC--CHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeec
Q 032146          101 AIR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       101 ~v~--d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      .|+  |+++++++|+++|+++..++    ++.+.++++|||||.|||.+.+
T Consensus        73 ~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           73 QIQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSS
T ss_pred             EcCHHHHHHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCC
Confidence            995  99999999999999987653    3578999999999999999865

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.89  E-value=1e-22  Score=131.87  Aligned_cols=119  Identities=17%  Similarity=0.124  Sum_probs=90.6

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCC-CCCCCccEEE
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP-EHGGRDRHTC   99 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~hl~   99 (146)
                      |++.+++|+.|.|+|++++++||+++||+++....+      ..+++..++..+.|+...........+ ..+.+..|++
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~   74 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRNP------EIIFYQMNGFVLATWLVQNLQEDVGVAVTSRPGSMALA   74 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEECS------SEEEEECSSSEEEEEEHHHHHHHHSSCCCSSCCSCEEE
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCCC------CEEEEEcCCEEEEEEeccccccccCCCCCCCCCeEEEE
Confidence            456789999999999999999999999999877531      356777788888888754210000001 1124458999


Q ss_pred             EEe---CCHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeec
Q 032146          100 IAI---RDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       100 ~~v---~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |.|   +|+++++++|+++|+++..++    .|.+.++++|||||.|||.+.+
T Consensus        75 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  127 (150)
T 3bqx_A           75 HNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDGHIWEIAFNP  127 (150)
T ss_dssp             EECSSGGGHHHHHHHHHHTTCEEEEEEECCTTSSEEEEEECTTCCEEEEEECT
T ss_pred             EEeCCHHHHHHHHHHHHHCCCEEecCCcccCCCCEEEEEECCCCCEEEEEeCC
Confidence            999   799999999999999985432    3568999999999999999875

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.89  E-value=3.6e-22  Score=127.62  Aligned_cols=116  Identities=15%  Similarity=0.253  Sum_probs=88.9

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCC-ceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      |+.+++|+.|.|+|++++++||+++||+++....+..... ....++..++..++++..+..      +  ..+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~------~--~~~~~h~~~   72 (139)
T 1r9c_A            1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKL------A--ERSYNHIAF   72 (139)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCC------S--SCCSCEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceEEEEECCEEEEEEeCCCC------C--CCCeeEEEE
Confidence            3678999999999999999999999999987654321110 011267778888888764321      1  234689999


Q ss_pred             EeC--CHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeec
Q 032146          101 AIR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       101 ~v~--d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      .|+  |+++++++|+++|+++..++    ++.+.+|++|||||.|||.+.+
T Consensus        73 ~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           73 KIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             EcCHHHHHHHHHHHHHCCCcccCCcccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            999  99999999999999986543    3678999999999999999853

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.89  E-value=1e-22  Score=133.31  Aligned_cols=120  Identities=18%  Similarity=0.349  Sum_probs=93.4

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCC---CCC-CCCCCcc
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS---GRP-EHGGRDR   96 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~-~~~~~~~   96 (146)
                      +++.+++||.|.|+|++++++||+++||+++......     ..+++..++..+.++.......+.   ..+ ..+.+..
T Consensus         4 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~   78 (160)
T 3r4q_A            4 KPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCGRQMLLLFDPQESSRADANNPIPRHGAVGQG   78 (160)
T ss_dssp             CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEETTEEEEEECHHHHTCCCTTCCSCCCEEEEEC
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCCCEEEEEEecCCccCccccCCCCcCCCccee
Confidence            5678999999999999999999999999999876441     356777788877777644321100   111 2223458


Q ss_pred             EEEEEe---CCHHHHHHHHHHCCCeEecc---CCCceEEEEECCCCCeEEEEeec
Q 032146           97 HTCIAI---RDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        97 hl~~~v---~d~~~~~~~l~~~G~~~~~~---~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |++|.|   +|+++++++|+++|+++..+   +.+.+.++++|||||+|||++.+
T Consensus        79 hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           79 HFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             EEEEEESSHHHHHHHHHHHHTTTCCCCEEEECTTSCEEEEEECTTCCEEEEEEGG
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCEEeccccccCCcEEEEEECCCCCEEEEEeCC
Confidence            999999   79999999999999997533   24789999999999999999865

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.88  E-value=1.1e-21  Score=126.91  Aligned_cols=116  Identities=18%  Similarity=0.185  Sum_probs=86.2

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      ++.+++|+.|.|+|++++++||+++||+++....+      ..+++.. ++..+.|+........   +....+..|++|
T Consensus         3 m~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~~~~~~g~~l~l~~~~~~~~~---~~~~~~~~~l~f   73 (148)
T 3rhe_A            3 MLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP------TFAMFVMKTGLRLGLWAQEEIEPK---AHQTGGGMELSF   73 (148)
T ss_dssp             ----CEEEEEEESCHHHHHHHHHHHHTCCCSEECS------SEEEEECTTSCEEEEEEGGGCSSC---CC----CEEEEE
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC------CEEEEEcCCCcEEEEecCCcCCcc---ccCCCCeEEEEE
Confidence            45789999999999999999999999999887543      3466776 6778888765443221   122234589999


Q ss_pred             EeCC---HHHHHHHHHHCCCeEeccC---CCceEEEEECCCCCeEEEEeecC
Q 032146          101 AIRD---VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVDG  146 (146)
Q Consensus       101 ~v~d---~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DpdG~~ie~~~~~~  146 (146)
                      .|+|   +++++++|+++|+++..++   ..++.+++.|||||+|||++..+
T Consensus        74 ~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G~~~~~~DPdG~~iel~~~~~  125 (148)
T 3rhe_A           74 QVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRIFCLKR  125 (148)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCCEEEEEEEETTEEEEEEECTTCCEEEEEEEC-
T ss_pred             EcCCHHHHHHHHHHHHhCCCEEEeCCeecCCCcEEEEECCCCCEEEEEEcCh
Confidence            9987   9999999999999985432   22488999999999999998753

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.88  E-value=7.3e-23  Score=131.56  Aligned_cols=125  Identities=15%  Similarity=0.238  Sum_probs=93.0

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC------eEEEEEeeCCCCCCCC--CCCCC
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA------EMIHLMELPNPDPLSG--RPEHG   92 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~~~~~~~~~--~~~~~   92 (146)
                      .++.+++|+.|.|+|++++++||+++|||++.............+++..++      ..++|+.......+..  ....+
T Consensus         5 ~m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~   84 (148)
T 1jc4_A            5 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   84 (148)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCC
Confidence            357899999999999999999999999999876543222233567777776      7888888654321100  00122


Q ss_pred             --CCccEEEEEeCCHHHHHHHHHHCCCeEe-ccC----CCceEEEE--ECCCCCeEEEEeec
Q 032146           93 --GRDRHTCIAIRDVSKLKMILDKAGISYT-LSK----SGRPAIFT--RDPDANALEFTQVD  145 (146)
Q Consensus        93 --~~~~hl~~~v~d~~~~~~~l~~~G~~~~-~~~----~g~~~~~~--~DpdG~~ie~~~~~  145 (146)
                        .+..|++|.|+|+++++++|+++|+++. ..+    .|.+.+++  +|||||.|||++.+
T Consensus        85 ~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           85 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCceEEEEEeecCCCcEEEEEEecC
Confidence              4568999999999999999999999986 222    34455666  89999999999875

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.88  E-value=1.6e-21  Score=123.30  Aligned_cols=113  Identities=19%  Similarity=0.284  Sum_probs=81.7

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEE-eCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEE
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  101 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~  101 (146)
                      ...|+||.|.|+|++++++||++ |||++........   ..+++. .++..+.|.......      ....+..|++|.
T Consensus         4 ~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~~~---~~~~~~~~~~~~l~l~~~~~~~------~~~~~~~~l~f~   73 (128)
T 3g12_A            4 SLLITSITINTSHLQGMLGFYRI-IGFQFTASKVDKG---SEVHRAVHNGVEFSLYSIQNPQ------RSQIPSLQLGFQ   73 (128)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC--------CCEEEEEETTEEEEEEECCCCS------SCCCCSEEEEEE
T ss_pred             cceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCCCC---CEEEEEeCCCeEEEEEECCCCc------CCCCCceEEEEE
Confidence            35799999999999999999999 9999876522111   234555 577778775443211      112334789999


Q ss_pred             eCCHHHHHHHHHHCCCe-Eecc----CCCceEEEEECCCCCeEEEEeecC
Q 032146          102 IRDVSKLKMILDKAGIS-YTLS----KSGRPAIFTRDPDANALEFTQVDG  146 (146)
Q Consensus       102 v~d~~~~~~~l~~~G~~-~~~~----~~g~~~~~~~DpdG~~ie~~~~~~  146 (146)
                      |+|+++++++|+++|++ +..+    +.|.+ ++++|||||+|||.+.++
T Consensus        74 v~dvd~~~~~l~~~G~~~~~~~p~~~~~G~~-~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           74 ITDLEKTVQELVKIPGAMCILDPTDMPDGKK-AIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             ESCHHHHHHHHTTSTTCEEEEEEEECC-CEE-EEEECTTCCEEEEEC---
T ss_pred             eCCHHHHHHHHHHCCCceeccCceeCCCccE-EEEECCCCCEEEEEEecc
Confidence            99999999999999999 6532    24555 999999999999998763

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.88  E-value=1.5e-21  Score=125.69  Aligned_cols=116  Identities=16%  Similarity=0.226  Sum_probs=89.0

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeC-CeEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      .+.+++|+.|.|+|++++++||+++||+++..+.+      ..+++..+ +..+.|+......+   .+....+..|++|
T Consensus        22 ~m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~~hl~f   92 (144)
T 2kjz_A           22 HMTHPDFTILYVDNPPASTQFYKALLGVDPVESSP------TFSLFVLANGMKLGLWSRHTVEP---KASVTGGGGELAF   92 (144)
T ss_dssp             -CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET------TEEEEECTTSCEEEEEETTSCSS---CCCCSSSSCEEEE
T ss_pred             ccCceeEEEEEeCCHHHHHHHHHHccCCEeccCCC------CeEEEEcCCCcEEEEEeCCCCCC---ccCCCCCceEEEE
Confidence            34599999999999999999999999999887542      23566665 46788876443221   1122345689999


Q ss_pred             EeC---CHHHHHHHHHHCCCeEeccC---CCceEEEEECCCCCeEEEEeecC
Q 032146          101 AIR---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVDG  146 (146)
Q Consensus       101 ~v~---d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DpdG~~ie~~~~~~  146 (146)
                      .|+   |+++++++|+++|+++..++   ..++.++++|||||.|||+++.+
T Consensus        93 ~v~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~g  144 (144)
T 2kjz_A           93 RVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLRVYAFAG  144 (144)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCCCCSCCEEETTEEEEEECCTTCCEEEEEEECC
T ss_pred             EeCCHHHHHHHHHHHHHCCCeEecCceecCCceEEEEECCCCCEEEEEecCC
Confidence            997   58999999999999876543   23488999999999999999864

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.87  E-value=2.6e-21  Score=120.20  Aligned_cols=111  Identities=17%  Similarity=0.234  Sum_probs=84.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  103 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~  103 (146)
                      .+++|+.|.|+|++++++||+++||+++....+      ..+++..++..+.+... ...+   ....+.+ .|++|.|+
T Consensus         4 m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~-~~~~---~~~~~~~-~~~~~~v~   72 (118)
T 2i7r_A            4 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSHCLMLSQN-HLVP---LENFQSG-IIIHIEVE   72 (118)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTEEEEEESS-CSSS---CCCCCSC-EEEEEECS
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC------CEEEEEeCCeEEEEEcC-CCCC---cccCCCe-EEEEEEEC
Confidence            579999999999999999999999999876432      24667777776655321 1111   1112233 58999999


Q ss_pred             CHHHHHHHHHHCCCeEecc----CCCceEEEEECCCCCeEEEEeec
Q 032146          104 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       104 d~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |+++++++|+++|+++..+    +.|.+.++++|||||.|||++.+
T Consensus        73 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  118 (118)
T 2i7r_A           73 DVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK  118 (118)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEECC
T ss_pred             CHHHHHHHHHHCCCceecCCccccCccEEEEEECCCccEEEEEecC
Confidence            9999999999999987433    24668999999999999999864

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.87  E-value=1.5e-21  Score=124.59  Aligned_cols=119  Identities=20%  Similarity=0.251  Sum_probs=88.5

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeCCCC--CCCCCCCCCCCccEEE
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPD--PLSGRPEHGGRDRHTC   99 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~--~~~~~~~~~~~~~hl~   99 (146)
                      +.+++|+.|.|+|++++++||++ |||++..+.+..    ..+.+.. ++..+.|+......  .+...+....+..|++
T Consensus         2 ~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~~----~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~   76 (138)
T 2a4x_A            2 SARISLFAVVVEDMAKSLEFYRK-LGVEIPAEADSA----PHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIA   76 (138)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGGGC----SEEEEECTTSCEEEEEEHHHHHHHCTTCCCCBSSCSEEEE
T ss_pred             cceeeEEEEEECCHHHHHHHHHH-cCCcEEecCCCC----ceEEEEcCCCeEEEEecCccchhhCcccCCCCCCCeEEEE
Confidence            46899999999999999999998 999988754311    2344555 56678887632110  0000122234568999


Q ss_pred             EEeC---CHHHHHHHHHHCCCeEecc----CCCceEEEEECCCCCeEEEEeecC
Q 032146          100 IAIR---DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  146 (146)
Q Consensus       100 ~~v~---d~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DpdG~~ie~~~~~~  146 (146)
                      |.|+   |+++++++|+++|+++..+    +.|.+.++++|||||.|||.+..|
T Consensus        77 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  130 (138)
T 2a4x_A           77 FEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPLP  130 (138)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEECTTCCEEEEEEECT
T ss_pred             EEeCCHHHHHHHHHHHHHCCCceeeCCcccCCCcEEEEEECCCCCEEEEEeCCc
Confidence            9999   9999999999999987643    246689999999999999998764

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.87  E-value=1.8e-21  Score=129.93  Aligned_cols=126  Identities=16%  Similarity=0.205  Sum_probs=90.8

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeC-------------------CeEEEEEeeC
Q 032146           20 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-------------------AEMIHLMELP   80 (146)
Q Consensus        20 ~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~l~~~~   80 (146)
                      .+.+.+++|+.|.|+|++++++||+++|||++..+.......+..+++..+                   +..++|+...
T Consensus        26 ~~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~  105 (184)
T 2za0_A           26 STKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNW  105 (184)
T ss_dssp             GGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEET
T ss_pred             CccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecC
Confidence            345678999999999999999999999999987654322222333445432                   4578887654


Q ss_pred             CCC-CCCC-C---CCCCCCccEEEEEeCCHHHHHHHHHHCCCeEeccC---CCceEEEEECCCCCeEEEEeec
Q 032146           81 NPD-PLSG-R---PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        81 ~~~-~~~~-~---~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      ... .+.. .   .....+..|++|.|+|+++++++|+++|+++...+   .+.+.+|++|||||+|||++..
T Consensus       106 ~~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~~~~~~DPdG~~iel~~~~  178 (184)
T 2za0_A          106 GTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  178 (184)
T ss_dssp             TGGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             CCCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCceeEEEEECCCCCEEEEEecC
Confidence            321 1100 0   01124568999999999999999999999987643   2356799999999999999864

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.87  E-value=8.5e-21  Score=120.41  Aligned_cols=112  Identities=22%  Similarity=0.261  Sum_probs=85.0

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEe
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  102 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v  102 (146)
                      ..+++||.|.|+|++++++||+++|||++....+      ..+.+..++..+.+........    + ...+..|++|.+
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~g~~~~l~~~~~~~~----~-~~~~~~h~~~~~   75 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP------DRITLDFFGDQLVCHLSDRWDR----E-VSMYPRHFGITF   75 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTEEEEEEECSCSCS----S-CCSSSCEEEEEC
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC------CcEEEEEeCCEEEEEEcCcccc----c-CCCCCCeEEEEE
Confidence            3579999999999999999999999999966433      2355565566666665443221    1 223458999998


Q ss_pred             C---CHHHHHHHHHHCCCeEecc--------CCCceEEEEECCCCCeEEEEeec
Q 032146          103 R---DVSKLKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       103 ~---d~~~~~~~l~~~G~~~~~~--------~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      +   |+++++++|+++|+++...        +.+.+.+|++|||||+|||.++.
T Consensus        76 ~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~  129 (135)
T 3rri_A           76 RDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYF  129 (135)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEES
T ss_pred             cChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEEC
Confidence            6   5999999999999987432        12357899999999999999875

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.87  E-value=9.2e-21  Score=118.92  Aligned_cols=107  Identities=12%  Similarity=0.155  Sum_probs=84.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  103 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~  103 (146)
                      ....|+.|.|+|++++++||+++||+++....+      ..+++..++..++|.......       . .+..|++|.|+
T Consensus         4 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~-------~-~~~~~~~~~v~   69 (124)
T 1xrk_A            4 LTSAVPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQV-------V-PDNTQAWVWVR   69 (124)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCTT-------T-GGGCEEEEEEE
T ss_pred             ccceeEEEEcCCHHHHHHHHHHccCceEEecCC------CEEEEEECCEEEEEEcCCCCC-------C-CCceEEEEEEC
Confidence            456789999999999999999999999987521      245677788888887653211       1 22379999999


Q ss_pred             CHHHHHHHHHHC------CC--eEeccC----CCceEEEEECCCCCeEEEEeec
Q 032146          104 DVSKLKMILDKA------GI--SYTLSK----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       104 d~~~~~~~l~~~------G~--~~~~~~----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |+++++++|+++      |+  ++..++    .| +.++++|||||.|||.+..
T Consensus        70 dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           70 GLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWG-REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             CHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTE-EEEEEECTTCCEEEEEEC-
T ss_pred             CHHHHHHHHHHhcccccCCccccccCCceecCCC-CEEEEECCCCCEEEEEEec
Confidence            999999999999      99  765432    34 8999999999999999864

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.87  E-value=7.5e-21  Score=122.84  Aligned_cols=121  Identities=12%  Similarity=0.125  Sum_probs=82.9

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCC---CCCCCCCCCCCCccEE
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP---DPLSGRPEHGGRDRHT   98 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~hl   98 (146)
                      ...+|.||+|.|+|++++++||+++ |+..........   ...+...++..+.+......   ......+....+..|+
T Consensus         6 ~~~rl~~V~L~V~Dl~~s~~FY~~l-g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (149)
T 4gym_A            6 SQSRLTFVNLPVADVAASQAFFGTL-GFEFNPKFTDES---CACMVVSEQAFVMLIDRARFADFTSKPIADATATTEAIV   81 (149)
T ss_dssp             -CCCCEEEEEEESCHHHHHHHHHHT-TCEECGGGCBTT---EEEEEEETTEEEEEEEHHHHGGGCSSCBCCTTTCBSCEE
T ss_pred             CCccEEEEEEEeCCHHHHHHHHHHh-CCCcceeecCCc---eeEEeecCcceEeeeccccccccccccCCCCCCCCeeEE
Confidence            3467899999999999999999885 555444333221   22333345555555443211   1111122233445799


Q ss_pred             EEEeC---CHHHHHHHHHHCCCeEeccC---CCceEEEEECCCCCeEEEEeecC
Q 032146           99 CIAIR---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVDG  146 (146)
Q Consensus        99 ~~~v~---d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DpdG~~ie~~~~~~  146 (146)
                      +|.|+   +++++++++++.|+.+..++   ++++.+||+|||||+|||++++|
T Consensus        82 a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~~~~~~f~DPDGn~iEi~~~~p  135 (149)
T 4gym_A           82 CVSAIDRDDVDRFADTALGAGGTVARDPMDYGFMYGRSFHDLDGHLWEVMWMSA  135 (149)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCEECSCCEECSSEEEEEEECTTCCEEEEEEECT
T ss_pred             EEEeccHHHHHHHHHHHHhcCceeeccccccCCEEEEEEEcCCCCEEEEEEECh
Confidence            99996   68889999999999987654   46789999999999999998765

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.87  E-value=2.5e-21  Score=120.27  Aligned_cols=109  Identities=17%  Similarity=0.215  Sum_probs=81.8

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC---eEEEEEeeCCCCCCCCCCCCCCCcc
Q 032146           20 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA---EMIHLMELPNPDPLSGRPEHGGRDR   96 (146)
Q Consensus        20 ~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~   96 (146)
                      .|.+.++ |+.|.|+|++++++||+++||+++....   .   ..+++..++   ..+.+.....  .       .....
T Consensus         3 ~m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~---~---~~~~~~~~~~~~~~l~l~~~~~--~-------~~~~~   66 (119)
T 2pjs_A            3 HMAVRRV-VANIATPEPARAQAFYGDILGMPVAMDH---G---WIVTHASPLEAHAQVSFAREGG--S-------GTDVP   66 (119)
T ss_dssp             --CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEEC---S---SEEEEEEEEEEEEEEEEESSSB--T-------TBCCC
T ss_pred             ccceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecC---C---EEEEEecCCCCcEEEEEEcCCC--C-------CCcee
Confidence            3678889 9999999999999999999999987642   1   233454442   3444443211  0       12347


Q ss_pred             EEEEEeCCHHHHHHHHHHCCCeEecc----CCCceEEEEECCCCCeEEEEee
Q 032146           97 HTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        97 hl~~~v~d~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      |++|.|+|+++++++|+++|+++..+    +.|.+.++++|||||.|||.+.
T Consensus        67 ~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           67 DLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             SEEEEESCHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEEECCHHHHHHHHHHCCCccccCCccCCCccEEEEEECCCCCEEEEEec
Confidence            99999999999999999999987543    2456899999999999999985

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.87  E-value=1.5e-20  Score=119.73  Aligned_cols=115  Identities=19%  Similarity=0.232  Sum_probs=86.8

Q ss_pred             eeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCcc-EEEEEeCCH
Q 032146           27 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR-HTCIAIRDV  105 (146)
Q Consensus        27 ~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-hl~~~v~d~  105 (146)
                      ..+.|.|+|++++++||+++||+++..+.+.. .....+.+..++..+.|.........   ...+.... |++|.|+|+
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~v~dv   79 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTGGGIVMVRRTGEPYTV---SCAGGHTCKQVIVWVSDV   79 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECSSSEEEEEETTCCSSC---EECCCCCCCEEEEEESCH
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecCCeEEEEEecCCCcCc---cCCCCCcEEEEEEEeCCH
Confidence            35889999999999999999999998765433 22345666678888887664322111   11122234 999999999


Q ss_pred             HHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeec
Q 032146          106 SKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       106 ~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      ++++++|+++|+++..++    .|.+.++++|||||.|||.++.
T Consensus        80 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  123 (137)
T 3itw_A           80 DEHFMRSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRHL  123 (137)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEETTTEEEEEEECSSSCEEEEEECC
T ss_pred             HHHHHHHHHcCCeeccCccccCCCcEEEEEECCCCCEEEEEEEc
Confidence            999999999999976432    4679999999999999999864

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.86  E-value=6.1e-21  Score=123.10  Aligned_cols=120  Identities=19%  Similarity=0.232  Sum_probs=90.9

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHH---hhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCc
Q 032146           19 IDYGVVSVHHVGILCENLERSLEFY---QNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRD   95 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d~~~~~~FY---~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   95 (146)
                      +.+.+.+++|+.|.|+|++++++||   +++|||++....+.     ...|+. ++..+.|+................+.
T Consensus        14 ~~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~-----~~~~~~-g~~~l~l~~~~~~~~~~~~~~~~~g~   87 (146)
T 3ct8_A           14 NLYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKH-GKTYLVFVQTEDRFQTPTFHRKRTGL   87 (146)
T ss_dssp             CTTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT-----EEEEEE-TTEEEEEEECCGGGSCSCCCTTSSSC
T ss_pred             ccccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC-----CceEec-CCeEEEEEEcCCCcccccccccCCCc
Confidence            4566789999999999999999999   99999999875431     124565 77788888765311100011122446


Q ss_pred             cEEEEEeC---CHHHHHHHHHHCCCeEecc-C------CCceEEEEECCCCCeEEEEee
Q 032146           96 RHTCIAIR---DVSKLKMILDKAGISYTLS-K------SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        96 ~hl~~~v~---d~~~~~~~l~~~G~~~~~~-~------~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      .|++|.|+   |+++++++|+++|+.+..+ +      ++.+.+|++|||||.|||+++
T Consensus        88 ~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           88 NHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             eEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            89999999   9999999999999998652 1      246789999999999999874

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.86  E-value=3e-21  Score=124.45  Aligned_cols=114  Identities=14%  Similarity=0.232  Sum_probs=83.9

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      |.+.++. +.|.|+|++++++||+++||+++..+..........  ...++  ++++.......      ...+..|++|
T Consensus         3 M~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~--~~~~~--~~l~~~~~~~~------~~~~~~hl~f   71 (144)
T 3r6a_A            3 MKILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVEL--AQIST--ILLIAGSEEAL------KPFRNTQATF   71 (144)
T ss_dssp             CCEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEE--EEETT--EEEEESCHHHH------GGGGGCCEEE
T ss_pred             EEEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEE--EEecc--EEEecCCcccC------CCCcceEEEE
Confidence            5577888 999999999999999999999988765432222222  23344  44554331111      0123489999


Q ss_pred             EeCCHHHHHHHHHHCCCeEeccC---CCceEEEEECCCCCeEEEEeec
Q 032146          101 AIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       101 ~v~d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      .|+|+++++++|+++|+++..++   +.++.+++.|||||+|||++..
T Consensus        72 ~V~d~d~~~~~l~~~G~~v~~~p~~~~~G~~~~~~DPdG~~iel~~~~  119 (144)
T 3r6a_A           72 LVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMTVRHSDGSVIEYVEHS  119 (144)
T ss_dssp             EESCHHHHHHHHHHTTCEEEEEEEEETTEEEEEEECTTSCEEEEEEEC
T ss_pred             EeCCHHHHHHHHHHcCCEEecCCccCCCceEEEEECCCCCEEEEEEcC
Confidence            99999999999999999986542   3348899999999999999875

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.86  E-value=2.5e-21  Score=125.29  Aligned_cols=119  Identities=13%  Similarity=0.115  Sum_probs=85.4

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCC--CCCCCCCccEEE
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTC   99 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~hl~   99 (146)
                      +..+++|+.|.|+|++++++||+++|||++... +.    ...+++..++..++|+..........  ......+ .|++
T Consensus        22 M~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~-~~----~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g-~~l~   95 (148)
T 2r6u_A           22 MTGRIVHFEIPFDDGDRARAFYRDAFGWAIAEI-PD----MDYSMVTTGPVGESGMPDEPGYINGGMMQRGEVTT-PVVT   95 (148)
T ss_dssp             TCCCEEEEEEEESSHHHHHHHHHHHHCCEEEEE-TT----TTEEEEECSCBCTTSSBCSSSCBCEEEEESSSSCS-CEEE
T ss_pred             cCCceEEEEEEeCCHHHHHHHHHHccCcEEEEC-CC----CCEEEEEeCCcceeecccCCcccccceeecCCCCe-EEEE
Confidence            447899999999999999999999999998763 21    13466777665443333222110000  0000123 4999


Q ss_pred             EEeCCHHHHHHHHHHCCCeEeccC---C-CceEEEEECCCCCeEEEEeecC
Q 032146          100 IAIRDVSKLKMILDKAGISYTLSK---S-GRPAIFTRDPDANALEFTQVDG  146 (146)
Q Consensus       100 ~~v~d~~~~~~~l~~~G~~~~~~~---~-g~~~~~~~DpdG~~ie~~~~~~  146 (146)
                      |.|+|+++++++|+++|+++..++   + .++.+|++|||||.|||+++.+
T Consensus        96 f~v~dld~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  146 (148)
T 2r6u_A           96 VDVESIESALERIESLGGKTVTGRTPVGNMGFAAYFTDSEGNVVGLWETAR  146 (148)
T ss_dssp             EECSCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEECC
T ss_pred             EEcCCHHHHHHHHHHcCCeEecCCeecCCCEEEEEEECCCCCEEEEEecCC
Confidence            999999999999999999986432   2 2589999999999999999763

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.86  E-value=1.8e-20  Score=119.08  Aligned_cols=108  Identities=22%  Similarity=0.292  Sum_probs=81.5

Q ss_pred             eEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCCHHH
Q 032146           28 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  107 (146)
Q Consensus        28 hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d~~~  107 (146)
                      +..|.|+|++++++||+++||+++..+.+      ..+++..++..++|........   .+. ..+..|++|.|+|+++
T Consensus        10 ~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~---~~~-~~~~~~l~~~v~dv~~   79 (134)
T 3fcd_A           10 TPFLHIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSGCGLRLLEEPARKI---IPD-GIARVAICIDVSDIDS   79 (134)
T ss_dssp             EEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTEEEEEEECCCC-------------EEEEEECSCHHH
T ss_pred             eeEEEECCHHHHHHHHHhccCcEEEEeCC------CeEEEEECCEEEEEEeCCCCCc---CCC-CCceEEEEEEeCCHHH
Confidence            46899999999999999999999987643      2577888888888887654321   121 1233799999999999


Q ss_pred             HHHHHHHCCC----eEe----ccCCCceEEEEECCCCCeEEEEeec
Q 032146          108 LKMILDKAGI----SYT----LSKSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       108 ~~~~l~~~G~----~~~----~~~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      ++++|+++|+    ++.    ..++|.+.++++|||||.|||.+..
T Consensus        80 ~~~~l~~~g~~~g~~i~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  125 (134)
T 3fcd_A           80 LHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFTAPL  125 (134)
T ss_dssp             HHHHHHHHHTTSCGGGEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             HHHHHHhcCCccCCccccCCcccCCCcEEEEEECCCCCEEEEEEcc
Confidence            9999996654    322    2335668999999999999999875

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.85  E-value=2.7e-20  Score=119.07  Aligned_cols=116  Identities=17%  Similarity=0.117  Sum_probs=84.8

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCC---CCCCCCCCCCCCCccEEEEE
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN---PDPLSGRPEHGGRDRHTCIA  101 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~hl~~~  101 (146)
                      +++|+.|.|+|++++++||+++|||++..+....    ..+++..++..+.+.....   .......+..+.+ .|++|.
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~----~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~-~~~~f~   82 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSP----IFRGLDTGKSCIGFNAHEAYELMQLAQFSETSGIK-FLLNFD   82 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCBT----TEEEEECSSSEEEEECTHHHHHTTCGGGCCCBSCC-EEEEEE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCCC----ceEEeecCCEEEEEcCccccccccccccCCCCCCe-EEEEEE
Confidence            8999999999999999999999999997654321    2345666666776654210   0000001112233 599999


Q ss_pred             eC---CHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeec
Q 032146          102 IR---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       102 v~---d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |+   |+++++++|+++|+++..++    .+.+.++++|||||.|||.+..
T Consensus        83 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (141)
T 2rbb_A           83 VDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPERNVFRINNVL  133 (141)
T ss_dssp             CSCHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             cCCHHHHHHHHHHHHHcCCeEecCccccCCccEEEEEECCCCCEEEEEEcc
Confidence            99   59999999999999975432    4678999999999999999875

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.85  E-value=9.5e-20  Score=114.49  Aligned_cols=106  Identities=20%  Similarity=0.273  Sum_probs=83.4

Q ss_pred             eeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCCH
Q 032146           26 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  105 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d~  105 (146)
                      ..++.|.|+|++++++||++ ||+++..+..      ..+++..++..++|...+...     +  ..+..|++|.|+|+
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~-----~--~~~~~~~~~~v~dv   69 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEFFAHPGLD-----P--LASWFSCCLRLDDL   69 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEECS------SEEEEEETTEEEEEEECTTCC-----G--GGCCCEEEEEESCH
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEecCC------CEEEEEeCCEEEEEEeCCCCC-----C--CCcceEEEEEECCH
Confidence            45789999999999999998 9999986521      346677788888887643311     1  13358999999999


Q ss_pred             HHHHHHHHHCCCeE-------ecc----CCCceEEEEECCCCCeEEEEeec
Q 032146          106 SKLKMILDKAGISY-------TLS----KSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       106 ~~~~~~l~~~G~~~-------~~~----~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      ++++++|+++|+++       ..+    +.|.+.++++|||||.|||.+..
T Consensus        70 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  120 (126)
T 1ecs_A           70 AEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  120 (126)
T ss_dssp             HHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHHHHCCCccccccCccccCCcccCcccEEEEEECCCCCEEEEecch
Confidence            99999999999983       322    24668999999999999999875

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.85  E-value=2.1e-20  Score=116.96  Aligned_cols=104  Identities=17%  Similarity=0.194  Sum_probs=82.4

Q ss_pred             eeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCCH
Q 032146           26 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  105 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d~  105 (146)
                      -.++.|.|+|++++++||+++||+++....+      ..+++..++..++|.......       . ....|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~-------~-~~~~~~~~~v~dv   71 (122)
T 1qto_A            6 GAVPVLTAVDVPANVSFWVDTLGFEKDFGDR------DFAGVRRGDIRLHISRTEHQI-------V-ADNTSAWIEVTDP   71 (122)
T ss_dssp             CCCCEEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCHH-------H-HTTCEEEEEESCH
T ss_pred             ceeEEEEcCCHHHHHHHHHhccCcEEeeCCC------CEEEEEECCEEEEEEcCCCCC-------C-CCceEEEEEECCH
Confidence            3468999999999999999999999986521      246677788888887643211       1 1237999999999


Q ss_pred             HHHHHHHHHC------CC--eEeccC----CCceEEEEECCCCCeEEEEee
Q 032146          106 SKLKMILDKA------GI--SYTLSK----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       106 ~~~~~~l~~~------G~--~~~~~~----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++++++|+++      |+  .+..++    .| +.++++|||||.|||.+.
T Consensus        72 d~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           72 DALHEEWARAVSTDYADTSGPAMTPVGESPAG-REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHHHTTTSCSCTTCTTSCEECCCEEETTE-EEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHhhccccccCccccccCCCcCCCCC-cEEEEECCCCCEEEEecC
Confidence            9999999999      99  765432    34 889999999999999985

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.84  E-value=4.1e-20  Score=113.86  Aligned_cols=106  Identities=16%  Similarity=0.235  Sum_probs=81.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeC-CeEEEEEeeCCCCCCCCCCCCCCCccEEEEEe
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  102 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v  102 (146)
                      .+++|+.|.|+|++++++||+++||+++.....  .   ..+++..+ +..+.++......        ..+..|++|.|
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~---~~~~~~~~~~~~l~l~~~~~~~--------~~~~~~~~~~v   68 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG--N---AFAVMRDNDGFILTLMKGKEVQ--------YPKTFHVGFPQ   68 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET--T---TEEEEECTTCCEEEEEECSSCC--------CCTTCCEEEEC
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC--C---cEEEEEcCCCcEEEEEeCCCCC--------CCceeEEEEEc
Confidence            368999999999999999999999999876432  1   34666664 4567776543211        13368999999


Q ss_pred             ---CCHHHHHHHHHHCCCeEeccC-CCceEEEEECCCCCeEEEE
Q 032146          103 ---RDVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFT  142 (146)
Q Consensus       103 ---~d~~~~~~~l~~~G~~~~~~~-~g~~~~~~~DpdG~~ie~~  142 (146)
                         +|+++++++|+++|+++..+. .+.+.++++|||||.||++
T Consensus        69 ~~~~d~~~~~~~l~~~G~~~~~p~~~~~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           69 ESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCCCEEC-CEEEEEEETTTEEEEEE
T ss_pred             CCHHHHHHHHHHHHHCCCEEecCcCCCcEEEEEECCCCcEEEEe
Confidence               799999999999999875432 2368899999999999996

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.83  E-value=2.2e-19  Score=130.27  Aligned_cols=122  Identities=16%  Similarity=0.236  Sum_probs=91.8

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCC-CCCceEEEEEeC----CeEEEEEeeCCCCCCCCCCCCCCCc
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVG----AEMIHLMELPNPDPLSGRPEHGGRD   95 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~-~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~   95 (146)
                      |++.+|+||+|.|+|++++++||+++||+++..+.... .......++...    +..++|+..+....   .....++.
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~---~~~~~~~~   80 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQ---GVIGDGQV   80 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCB---CBCCBSEE
T ss_pred             ccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCC---CCCCCCce
Confidence            56889999999999999999999999999998754221 112222334332    46788877654321   11222456


Q ss_pred             cEEEEEeC--CHHHHHHHHHHCCCeEec-cCCCceEEEEECCCCCeEEEEeec
Q 032146           96 RHTCIAIR--DVSKLKMILDKAGISYTL-SKSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        96 ~hl~~~v~--d~~~~~~~l~~~G~~~~~-~~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      .|+||.|+  |+++++++|+++|+++.. ...+.+.+||.|||||.|||++..
T Consensus        81 ~hiaf~V~~~dl~~~~~rL~~~Gv~~~~~~~~g~~~~~f~DPdGn~iEl~~~~  133 (335)
T 3oaj_A           81 GVTSYVVPKGAMAFWEKRLEKFNVPYTKIERFGEQYVEFDDPHGLHLEIVERE  133 (335)
T ss_dssp             EEEEEEECTTCHHHHHHHHHHTTCCCEEEEETTEEEEEEECTTSCEEEEEECS
T ss_pred             EEEEEEecHHHHHHHHHHHHhCcceeeeeccCCcEEEEEECCCCCEEEEEEeC
Confidence            89999999  999999999999998764 335788999999999999999864

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.82  E-value=1.2e-19  Score=115.71  Aligned_cols=117  Identities=13%  Similarity=0.147  Sum_probs=82.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe--EEEEEeeCCCCCCCCCCCCCCCccEEEEE
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA  101 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hl~~~  101 (146)
                      ....||+|.|+|++++++||+++|||++..+... ......+++..++.  .+++........    ...+.+..|++|.
T Consensus        10 ~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~hi~~~   84 (139)
T 1twu_A           10 AAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHADYHLEFTQYEGGST----APVPHPDSLLVFY   84 (139)
T ss_dssp             CSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSSSEEEEEEEETTCCC----CCCCCTTCEEEEE
T ss_pred             cceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCCceEEEEeecCCCCC----CCCCCCccEEEEE
Confidence            3466789999999999999999999998764321 12234566666543  566655443221    1223446899999


Q ss_pred             eCCH---HHHHHHHHHCCCeEecc--C-CCceEEEEECCCCCeEEEEeec
Q 032146          102 IRDV---SKLKMILDKAGISYTLS--K-SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       102 v~d~---~~~~~~l~~~G~~~~~~--~-~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |+|+   ++++++|+++|+.+...  + .+.+..|++|||||+|||++..
T Consensus        85 v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           85 VPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             CCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSC
T ss_pred             eCCcchHHHHHHHHHHcCCcCcCCCCcccCCCCeEEECCCCCEEEEEEcC
Confidence            9999   99999999999998732  1 1111237999999999999863

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.81  E-value=4.7e-19  Score=113.83  Aligned_cols=113  Identities=19%  Similarity=0.262  Sum_probs=81.4

Q ss_pred             eEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCC--C--CCCCCCCCCccEEEEEeC
Q 032146           28 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP--L--SGRPEHGGRDRHTCIAIR  103 (146)
Q Consensus        28 hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~--~~~~~~~~~~~hl~~~v~  103 (146)
                      .+.|.|+|++++++||+++|||++.......    ..+++..++..++|........  .  ......+.+ .+++|.|+
T Consensus         8 ~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~----~~~~l~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g-~~~~~~v~   82 (145)
T 2rk9_A            8 VPELYCFDINVSQSFFVDVLGFEVKYERPDE----EFVYLTLDGVDVMLEGIAGKSRKWLSGDLEFPLGSG-VNFQWDVI   82 (145)
T ss_dssp             EEEEEESSHHHHHHHHHHTTCCEEEEEEGGG----TEEEEEETTEEEEEEEC-----------CCSSTTTT-EEEEEECS
T ss_pred             eEEEEECCHHHHHHHHHhccCCEEEeecCCC----CEEEEEcCCeEEEEEeccCCCcccccCccccCCCCc-eEEEEEEC
Confidence            4889999999999999999999987432211    2466777888888876522111  0  011122234 35999999


Q ss_pred             CHHHHHHHHHH-CCCeEecc-----------CCCceEEEEECCCCCeEEEEeec
Q 032146          104 DVSKLKMILDK-AGISYTLS-----------KSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       104 d~~~~~~~l~~-~G~~~~~~-----------~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |+++++++|++ +|+++..+           .++.+.++++|||||+|||++..
T Consensus        83 dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~  136 (145)
T 2rk9_A           83 DIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDI  136 (145)
T ss_dssp             CHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC-
T ss_pred             CHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcC
Confidence            99999999999 99987532           23458899999999999999864

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.81  E-value=8.4e-20  Score=116.57  Aligned_cols=114  Identities=18%  Similarity=0.155  Sum_probs=79.5

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEE-----Eee-CCCCCCCCCCCCCCCc
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHL-----MEL-PNPDPLSGRPEHGGRD   95 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~-~~~~~~~~~~~~~~~~   95 (146)
                      .+.+++|+.|.|+|++++++||+++||+++....+      ..+.+. .+..++.     ... +....  .....+.+.
T Consensus         5 ~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~-~g~~l~~~~~~~~~~~~~~~~--~~~~~~~~~   75 (141)
T 2qnt_A            5 QGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG------SFVLFE-TGFAIHEGRSLEETIWRTSSD--AQEAYGRRN   75 (141)
T ss_dssp             CSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS------SEEEET-TSCEEEEHHHHHHHHHSCCC----CCCSCCSS
T ss_pred             cccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC------CcEEEe-ccceeccCchhhhhccccCCc--cccccCCCc
Confidence            34678999999999999999999999999876532      123232 2333331     010 00111  011223456


Q ss_pred             cEEEEEeCCHHHHHHHHHHCCCeEecc----CCCceEEEEECCCCCeEEEEeec
Q 032146           96 RHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        96 ~hl~~~v~d~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      .|++|.|+|+++++++|++ |+++..+    +.|.+.++++|||||.|||.+..
T Consensus        76 ~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           76 MLLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             CEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTSCEEEEEECTTCCEEEEEECC
T ss_pred             eEEEEEeCcHHHHHHHHHc-CCccccCCccCCCCCEEEEEECCCCCEEEEEecc
Confidence            8999999999999999999 9987543    24568999999999999999864

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.81  E-value=7.3e-19  Score=122.87  Aligned_cols=110  Identities=18%  Similarity=0.233  Sum_probs=87.6

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEE
Q 032146           20 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC   99 (146)
Q Consensus        20 ~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~   99 (146)
                      ...+.+++||.|.|+|++++++||+++|||++....+      ..+++..++..+.|...+...         .+..|++
T Consensus        21 ~~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g~~~l~l~~~~~~~---------~~~~hia   85 (252)
T 3pkv_A           21 QGHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQFRAAADGT---------KPFYHIA   85 (252)
T ss_dssp             ----CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS------SEEEEEETTEEEEEEECCTTC---------CCCCEEE
T ss_pred             cCcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeCCEEEEEEECCCCC---------CCeeEEE
Confidence            3457899999999999999999999999999887643      347778888888887653221         2368999


Q ss_pred             EEeC--CHHHHHHHHHHCCCeEec---------cCCCceEEEEECCCCCeEEEEeec
Q 032146          100 IAIR--DVSKLKMILDKAGISYTL---------SKSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       100 ~~v~--d~~~~~~~l~~~G~~~~~---------~~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |.|+  ++++++++|+++ +++..         ...+.+.+||+|||||.|||++.+
T Consensus        86 f~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~  141 (252)
T 3pkv_A           86 INIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQ  141 (252)
T ss_dssp             EEECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEES
T ss_pred             EEecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeC
Confidence            9986  799999999999 98854         135689999999999999999864

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.79  E-value=2.1e-18  Score=111.20  Aligned_cols=112  Identities=14%  Similarity=0.113  Sum_probs=75.8

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeecc-ccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEE--
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINE-ARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT--   98 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl--   98 (146)
                      .+.+++|+.|.|+|++++++||+++|||++.. ....+.    ..++   +..++|. ......   .+.. ....|+  
T Consensus        18 ~~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~----~~~~---g~~l~l~-~~~~~~---~~~~-~~~~~~~~   85 (148)
T 3bt3_A           18 YVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEG----FGDY---GCVFDYP-SEVAVA---HLTP-FRGFHLFK   85 (148)
T ss_dssp             CEEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTTS----CEEE---EEEESSC-TTTTSC---C--C-CCSEEEEE
T ss_pred             ceEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCCC----ccEE---ccEEEEe-ccCCCc---cccc-ccccceee
Confidence            46789999999999999999999999999853 111111    1233   2233330 111111   1110 001222  


Q ss_pred             --------EE-EeCCHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeec
Q 032146           99 --------CI-AIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        99 --------~~-~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                              +| .|+|+++++++|+++|+++..++    .|.+.++++|||||.|||.++.
T Consensus        86 g~~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           86 GEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             SCCCSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             ccCCCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCccEEEEEECCCCCEEEEeeec
Confidence                    55 89999999999999999875433    4668899999999999999864

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.79  E-value=1.6e-18  Score=125.85  Aligned_cols=116  Identities=14%  Similarity=0.186  Sum_probs=87.4

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe--EEEEEeeCCCCCCCCCCCCCCCccE
Q 032146           20 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH   97 (146)
Q Consensus        20 ~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~h   97 (146)
                      .+.+.+|+|++|.|+|++++++||+++|||++..... .......+|+..++.  .+.+.....        ...++..|
T Consensus       148 g~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~~~~l~~~~~~~--------~~~~~~~H  218 (339)
T 3lm4_A          148 GIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLLGHEVACMRDMT--------GGHGKLHH  218 (339)
T ss_dssp             SSCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSSSCSEEEEECTT--------SCCSEEEE
T ss_pred             CCCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCCceEEEEeccCC--------CCCCceeE
Confidence            3578899999999999999999999999999887543 222234566666543  455554211        11245799


Q ss_pred             EEEEeCC---HHHHHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEee
Q 032146           98 TCIAIRD---VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        98 l~~~v~d---~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++|.|+|   +++++++|+++|+++...+     .+.+.+|++||+||+||+++.
T Consensus       219 iaf~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  273 (339)
T 3lm4_A          219 LAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGE  273 (339)
T ss_dssp             EEEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECC
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEc
Confidence            9999998   8888999999999986433     235779999999999999753

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.79  E-value=2.8e-18  Score=124.46  Aligned_cols=117  Identities=16%  Similarity=0.168  Sum_probs=87.9

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC--eEEEEEeeCCCCCCCCCCCCCCCccE
Q 032146           20 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRH   97 (146)
Q Consensus        20 ~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~h   97 (146)
                      ...+.+|+||+|.|+|++++++||+++|||++..+..      ..+.+..++  ..+++...+...  .. ....++.+|
T Consensus       148 ~~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~------~~~~~~~g~~~~~l~l~~~~~~~--~~-~~g~g~~~H  218 (335)
T 3oaj_A          148 DVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG------DFVRYRSAGDIGNVIDLKLTPIG--RG-QMGAGTVHH  218 (335)
T ss_dssp             TTSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET------TEEEEECSSSSSCEEEEESSCCC--BC-BCSBTEEEE
T ss_pred             hhhhccccceEEEECCHHHHHHHHHHHhCCEEeeccC------CEEEEEeCCCCcEEEEEeCCCCC--cC-CCCCcceEE
Confidence            3468899999999999999999999999999987643      123444443  477776643321  11 122345789


Q ss_pred             EEEEeCC---HHHHHHHHHHCCCeEecc--CCCceEEEEECCCCCeEEEEeec
Q 032146           98 TCIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        98 l~~~v~d---~~~~~~~l~~~G~~~~~~--~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      +||.|+|   ++++.++|+++|+.+...  +...+++|++||+||.||+....
T Consensus       219 iAf~v~d~~~l~~~~~~L~~~G~~~~~~~~r~~~~siYfrDP~G~~iEl~td~  271 (335)
T 3oaj_A          219 IAWRANDDEDQLDWQRYIASHGYGVTPVRDRNYFNAIYFREHGEILFEIATDP  271 (335)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSSEEEEEECTTSCEEEEEESC
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCCCccccccCCcEEEEEEECCCCcEEEEEeCC
Confidence            9999997   667899999999986532  34578899999999999999863

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.78  E-value=3.8e-18  Score=123.69  Aligned_cols=121  Identities=15%  Similarity=0.207  Sum_probs=86.8

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCC-CCCceEEEEEeC----CeEEEEEeeCCCCCCCCCCCCCCCcc
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVG----AEMIHLMELPNPDPLSGRPEHGGRDR   96 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~-~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~   96 (146)
                      ++.+++||.|.|+|++++++||+++|||++....... .......++..+    +..+.++..+....   ......+..
T Consensus        27 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~---~~~~~~~~~  103 (338)
T 1zsw_A           27 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGR---TYRGTNAIT  103 (338)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCB---CBCCBSEEE
T ss_pred             cCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCcc---CcCCCCCee
Confidence            5889999999999999999999999999987653110 000111223222    34666665432211   111123468


Q ss_pred             EEEEEeC---CHHHHHHHHHHCCCeEeccC--CCceEEEEECCCCCeEEEEeec
Q 032146           97 HTCIAIR---DVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        97 hl~~~v~---d~~~~~~~l~~~G~~~~~~~--~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |++|.|+   |+++++++|+++|+.+..++  .|.+.+|+.|||||.|||++..
T Consensus       104 hiaf~v~~~~dld~~~~~l~~~G~~~~~~~~~~G~~~~~f~DPdG~~iel~~~~  157 (338)
T 1zsw_A          104 RIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSN  157 (338)
T ss_dssp             EEEEEESCHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECT
T ss_pred             eEEEEcCCHHHHHHHHHHHHHCCCccccccccCCcEEEEEECCCCCEEEEEEcC
Confidence            9999998   79999999999999986542  4668999999999999999864

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.78  E-value=3.1e-18  Score=121.87  Aligned_cols=108  Identities=16%  Similarity=0.139  Sum_probs=84.2

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEe
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  102 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v  102 (146)
                      +.+|+||.|.|+|++++++||+++|||++..+.+      ..+++..++..+.+...+..         ..+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~f~v   66 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAVQQGE---------VDDLAFAGYEV   66 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEE
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC------CeEEEEeCCCcEEEEEecCC---------CCCccEEEEEe
Confidence            6789999999999999999999999999987543      23566665543222222211         12458999999


Q ss_pred             C---CHHHHHHHHHHCCCeEeccC-------CCceEEEEECCCCCeEEEEeec
Q 032146          103 R---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       103 ~---d~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      +   |+++++++|+++|+++...+       .+.+.+++.|||||.|||++.+
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  119 (297)
T 1lgt_A           67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (297)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECc
Confidence            8   99999999999999876432       4678999999999999999864

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.78  E-value=3.6e-18  Score=122.30  Aligned_cols=114  Identities=17%  Similarity=0.280  Sum_probs=84.2

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCC-CCceEEEEEeCCe--EEEEEeeCCCCCCCCCCCCCCCccE
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH   97 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~h   97 (146)
                      +.+.+|+||+|.|+|++++++||+++|||++........ ......|+..++.  .+.+...+          ..++..|
T Consensus       147 ~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~H  216 (309)
T 3hpy_A          147 IAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVEYP----------EKGKLHH  216 (309)
T ss_dssp             SCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCSEEEEECS----------STTEEEE
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCceeEEEecCC----------CCCceeE
Confidence            567899999999999999999999999999876543222 2234566766543  33333321          1234799


Q ss_pred             EEEEeCCHHH---HHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEee
Q 032146           98 TCIAIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        98 l~~~v~d~~~---~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +||.|+|+++   ++++|+++|+++...+     .+.+.+|++|||||+||+...
T Consensus       217 iaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (309)
T 3hpy_A          217 CSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMG  271 (309)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEE
T ss_pred             EEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeC
Confidence            9999997665   6789999999876432     346789999999999999864

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.77  E-value=1e-17  Score=122.72  Aligned_cols=115  Identities=20%  Similarity=0.228  Sum_probs=88.1

Q ss_pred             ccCCCCCCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe----EEEEEeeCCCCCCCCC
Q 032146           13 IRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGR   88 (146)
Q Consensus        13 ~~~~~~~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~   88 (146)
                      +-.+..++..|.+|.||.|.|+|++++++||+++|||++..+.+      ..+++...+.    .+.+...+  .     
T Consensus         5 ~P~P~~P~p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~~--~-----   71 (365)
T 4ghg_A            5 IPKPVAPAPDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKGP--V-----   71 (365)
T ss_dssp             CCCCSSCCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS--S-----
T ss_pred             CCCCCCCCCCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccCC--C-----
Confidence            33445566779999999999999999999999999999988643      3466766432    23333211  1     


Q ss_pred             CCCCCCccEEEEEeC---CHHHHHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEee
Q 032146           89 PEHGGRDRHTCIAIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        89 ~~~~~~~~hl~~~v~---d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                          .+..|++|.|.   +++++.++|+++|+.+...+     .+++.++|.|||||.|||+..
T Consensus        72 ----~gl~~~a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~  131 (365)
T 4ghg_A           72 ----AALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFE  131 (365)
T ss_dssp             ----CEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             ----CCcceEEEEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEE
Confidence                24689999997   58889999999999986532     346889999999999999853

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.77  E-value=3.6e-18  Score=121.26  Aligned_cols=108  Identities=13%  Similarity=0.135  Sum_probs=83.1

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEe
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  102 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v  102 (146)
                      +.+++||.|.|+|++++++||+++|||++..+..      ..+++..++..+.+......         ..+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~l~~~~~~---------~~~~~~~~f~v   66 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIAVQPGE---------LDDLAYAGLEV   66 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEC
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC------CeEEEEcCCceEEEEEccCC---------CCCccEEEEEE
Confidence            6789999999999999999999999999987532      23556665543222222111         12358999999


Q ss_pred             C---CHHHHHHHHHHCCCeEeccC-------CCceEEEEECCCCCeEEEEeec
Q 032146          103 R---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       103 ~---d~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      +   |+++++++|+++|+++...+       .+.+.++++|||||.|||++..
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  119 (292)
T 1kw3_B           67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (292)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECc
Confidence            8   89999999999999976532       4578899999999999999764

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.77  E-value=7.7e-18  Score=122.06  Aligned_cols=116  Identities=13%  Similarity=0.182  Sum_probs=84.7

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe--CCe--EEEEEeeCCCCCCCCCCCCCCCc
Q 032146           20 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV--GAE--MIHLMELPNPDPLSGRPEHGGRD   95 (146)
Q Consensus        20 ~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~--~~~--~~~l~~~~~~~~~~~~~~~~~~~   95 (146)
                      .+.+.+++|+.|.|+|++++++||+++|||++.....      ..+++..  ++.  .+..+.. .. . . .....++.
T Consensus       175 ~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~-~~-~-~-~~~~~~~~  244 (338)
T 1zsw_A          175 KHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND------QEAIFQSIKGEAFGEIVVKYL-DG-P-T-EKPGRGSI  244 (338)
T ss_dssp             GGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEESSTTCSTTCEEEEEC-CS-S-B-CBCCBTCE
T ss_pred             cccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC------CeEEEEecCCCCceEEEEecc-CC-C-C-CCCCCCce
Confidence            4668899999999999999999999999999987543      1244444  222  3333332 11 1 0 11112446


Q ss_pred             cEEEEEeC---CHHHHHHHHHHCCCeEecc--CCCceEEEEECCCCCeEEEEeec
Q 032146           96 RHTCIAIR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        96 ~hl~~~v~---d~~~~~~~l~~~G~~~~~~--~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      .|++|.|+   |+++++++|+++|+++..+  ..+.+.+|++|||||+|||++..
T Consensus       245 ~hiaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          245 HHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEEE
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCceeeeeecCceEEEEEECCCCCEEEEEEcC
Confidence            89999999   7999999999999988522  24678899999999999999864

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.77  E-value=9.6e-18  Score=120.05  Aligned_cols=109  Identities=19%  Similarity=0.225  Sum_probs=84.3

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CC---eEEEEEeeCCCCCCCCCCCCCCCcc
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGRDR   96 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~---~~~~l~~~~~~~~~~~~~~~~~~~~   96 (146)
                      |.+.+++||.|.|+|++++++||+++||+++..+...     ..+++.. ++   ..+.+.....           .+..
T Consensus         4 ~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~l~~~~~~~~~~l~l~~~~~-----------~~~~   67 (309)
T 3hpy_A            4 TGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQ-----GRVYFKCWDERDHSCYIIREADT-----------AGID   67 (309)
T ss_dssp             CSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECTT-----SCEEEECTTCCBSCSEEEEECSS-----------CEEE
T ss_pred             cccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcCC-----CeEEEEeccCCCceEEEEEeCCC-----------Ccee
Confidence            4578999999999999999999999999999875321     2355554 33   2444433211           2468


Q ss_pred             EEEEEeCC---HHHHHHHHHHCCCeEecc-----CCCceEEEEECCCCCeEEEEeec
Q 032146           97 HTCIAIRD---VSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        97 hl~~~v~d---~~~~~~~l~~~G~~~~~~-----~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |++|.|++   +++++++|+++|+++...     +.+.+.+|++|||||.|||++..
T Consensus        68 h~a~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~  124 (309)
T 3hpy_A           68 FFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEK  124 (309)
T ss_dssp             EEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCB
T ss_pred             EEEEEECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEcc
Confidence            99999986   999999999999998653     24578999999999999998754

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.76  E-value=4.9e-18  Score=121.00  Aligned_cols=107  Identities=17%  Similarity=0.161  Sum_probs=82.4

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeecc-ccCCCCCCceEEEEEeCCe--EEEEEeeCCCCCCCCCCCCCCCccE
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINE-ARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH   97 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~h   97 (146)
                      |++.+++|+.|.|+|++++++||+++|||++.. +..      ..+++..++.  .+.+...  .         ..+..|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~------~~~~~~~~~~~~~l~l~~~--~---------~~~~~~   63 (300)
T 2zyq_A            1 MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPE------GALYLRMDDFPARLVVVPG--E---------HDRLLE   63 (300)
T ss_dssp             -CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCCS------SCEEEESSSSSCSEEEEEC--S---------SCEEEE
T ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCCC------CeEEEEeCCCcEEEEEecC--C---------CCCcce
Confidence            457899999999999999999999999999876 322      2355665543  3433331  1         134579


Q ss_pred             EEEEeC---CHHHHHHHHHHCCCeEeccC-------CCceEEEEECCCCCeEEEEee
Q 032146           98 TCIAIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        98 l~~~v~---d~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++|.|+   |+++++++|+++|+++...+       .+.+.+++.|||||.|||++.
T Consensus        64 ~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           64 AGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence            999997   48999999999999976432       457889999999999999986

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.76  E-value=1.4e-17  Score=119.99  Aligned_cols=110  Identities=19%  Similarity=0.220  Sum_probs=86.5

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CC---eEEEEEeeCCCCCCCCCCCCCCC
Q 032146           19 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGR   94 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~---~~~~l~~~~~~~~~~~~~~~~~~   94 (146)
                      +++++.+++|+.|.|+|++++++||+++||+++..+..      ..+++.. ++   ..+.+....           ..+
T Consensus        11 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~~   73 (323)
T 1f1u_A           11 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQGP-----------IAA   73 (323)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS-----------SCE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC------CEEEEEecCCCCcEEEEEEECC-----------CCC
Confidence            56789999999999999999999999999999877532      2456664 32   245444321           123


Q ss_pred             ccEEEEEe---CCHHHHHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEeec
Q 032146           95 DRHTCIAI---RDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        95 ~~hl~~~v---~d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      ..|++|.|   +|+++++++|+++|+++...+     .+++.+++.||+||.|||++..
T Consensus        74 ~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~~  132 (323)
T 1f1u_A           74 VAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYET  132 (323)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCB
T ss_pred             eeEEEEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEec
Confidence            58999999   689999999999999986543     3478999999999999998753

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.76  E-value=6.5e-18  Score=122.29  Aligned_cols=117  Identities=12%  Similarity=0.067  Sum_probs=86.2

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCC-----------CCCceEEEEEeC----CeEEEEEeeCCCCC
Q 032146           20 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-----------KLPYRGAWLWVG----AEMIHLMELPNPDP   84 (146)
Q Consensus        20 ~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~-----------~~~~~~~~~~~~----~~~~~l~~~~~~~~   84 (146)
                      .|.+.+++|++|.|+|++++++||+++||+++..+....           ......+++..+    ...++|....... 
T Consensus        22 ~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~-  100 (330)
T 3zi1_A           22 SMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVG-  100 (330)
T ss_dssp             GCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCC-
T ss_pred             ecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCC-
Confidence            356679999999999999999999999999987654422           223334555553    3467776643321 


Q ss_pred             CCCCCCCCCCccEEEEEeCCHHHHHHHHHHCCCeEeccCCCceEEEEECCCCCeEEEEeec
Q 032146           85 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        85 ~~~~~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                         ....+.+..|++|.|+|+   +++++++|+++...+  ...+|+.|||||.|||++..
T Consensus       101 ---~~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~--~~~~~~~DPdG~~iel~~~~  153 (330)
T 3zi1_A          101 ---DYKLGNDFMGITLASSQA---VSNARKLEWPLTEVA--EGVFETEAPGGYKFYLQNRS  153 (330)
T ss_dssp             ---CCCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEE--TTEEEEECTTSCEEEEESSC
T ss_pred             ---ccccCCCeeEEEEECchH---HHHHHHcCCceeccC--CceEEEECCCCCEEEEEecC
Confidence               122344679999999987   677888999987654  34899999999999999864

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.76  E-value=7.6e-18  Score=120.36  Aligned_cols=115  Identities=16%  Similarity=0.272  Sum_probs=82.7

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC--eEEEEEeeCCCCCCCCCCCCCCCccE
Q 032146           20 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRH   97 (146)
Q Consensus        20 ~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~h   97 (146)
                      .+.+.+++|+.|.|+|++++++||+++|||++..............|+..++  ..+.+...+          ..+...|
T Consensus       145 ~~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----------~~g~~~h  214 (307)
T 1mpy_A          145 GMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHP----------EKGRLHH  214 (307)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECS----------SSSEEEE
T ss_pred             CCCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCCceeEEEecCC----------CCCcceE
Confidence            4678899999999999999999999999999876432111111224555532  234443211          1123589


Q ss_pred             EEEEeC---CHHHHHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEee
Q 032146           98 TCIAIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        98 l~~~v~---d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++|.|+   |+++++++|+++|+++...+     ..++.+|++|||||+|||.+.
T Consensus       215 i~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  269 (307)
T 1mpy_A          215 VSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCG  269 (307)
T ss_dssp             EEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEec
Confidence            999999   56777899999999975322     236789999999999999985

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.75  E-value=2.8e-17  Score=118.52  Aligned_cols=112  Identities=17%  Similarity=0.215  Sum_probs=83.7

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe--EEEEEeeCCCCCCCCCCCCCCCccE
Q 032146           20 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH   97 (146)
Q Consensus        20 ~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~h   97 (146)
                      .+.+.+|+|++|.|+|++++++|| ++|||++.............+|+..++.  .+.+...+           +.+.+|
T Consensus       147 ~~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~~~~~~~~-----------~~~~~H  214 (323)
T 1f1u_A          147 AGELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN-----------GPRMHH  214 (323)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESS-----------BSEEEE
T ss_pred             CCCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCcccEEEeCCC-----------CCCceE
Confidence            356789999999999999999999 9999998764432222234456655432  34433211           124689


Q ss_pred             EEEEeCCHHH---HHHHHHHCCC--eEecc-----CCCceEEEEECCCCCeEEEEe
Q 032146           98 TCIAIRDVSK---LKMILDKAGI--SYTLS-----KSGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus        98 l~~~v~d~~~---~~~~l~~~G~--~~~~~-----~~g~~~~~~~DpdG~~ie~~~  143 (146)
                      ++|.|+|+++   ++++|+++|+  ++...     ..+...+|++||+||+||+++
T Consensus       215 iaf~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~  270 (323)
T 1f1u_A          215 VAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYT  270 (323)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEE
T ss_pred             EEEECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEe
Confidence            9999999998   9999999999  87642     234677999999999999985

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.75  E-value=1.7e-17  Score=118.50  Aligned_cols=109  Identities=17%  Similarity=0.156  Sum_probs=83.7

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC--eEEEEEeeCCCCCCCCCCCCCCCccE
Q 032146           20 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRH   97 (146)
Q Consensus        20 ~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~h   97 (146)
                      .|.+.+++|+.|.|+|++++++||+++|||++..+..  .   ...|+..++  ..+.+....           ..+..|
T Consensus         4 ~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~~~~l~l~~~~-----------~~~~~~   67 (302)
T 2ehz_A            4 QAAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--K---DRFYLRMDYWHHRIVVHHNG-----------QDDLEY   67 (302)
T ss_dssp             CCCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--S---SEEEEESSSBSCSEEEESSC-----------CSEEEE
T ss_pred             cccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--C---cceEEEeCCCceEEEEecCC-----------CCCeeE
Confidence            3678999999999999999999999999999986432  1   235565533  234443211           123589


Q ss_pred             EEEEeC---CHHHHHHHHHHCCCeEeccC-------CCceEEEEECCCCCeEEEEee
Q 032146           98 TCIAIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        98 l~~~v~---d~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++|.|+   |+++++++|+++|+++...+       .+.+.+++.|||||.|||++.
T Consensus        68 ~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  124 (302)
T 2ehz_A           68 LGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWG  124 (302)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEE
T ss_pred             EEEEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEEC
Confidence            999995   79999999999999976543       346889999999999999976

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.75  E-value=1.4e-17  Score=118.94  Aligned_cols=108  Identities=17%  Similarity=0.214  Sum_probs=84.8

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC--eEEEEEeeCCCCCCCCCCCCCCCccEE
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHT   98 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hl   98 (146)
                      |.+.+++|+.|.|+|++++++||+++||+++.....  .   ..+++..++  ..+.|....           ..+..|+
T Consensus         2 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~~~~l~l~~~~-----------~~~~~~~   65 (305)
T 2wl9_A            2 AKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE--D---DRIYLRMDRWHHRIVLHADG-----------SDDLAYI   65 (305)
T ss_dssp             CCCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCSC--T---TEEEEECSSBSCSEEEECSS-----------CCEEEEE
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHhccCCEEeeccC--C---CeEEEEeCCCeEEEEEEECC-----------CCCeEEE
Confidence            457899999999999999999999999999876221  1   245666665  456664321           1346899


Q ss_pred             EEEeC---CHHHHHHHHHHCCCeEeccC-------CCceEEEEECCCCCeEEEEee
Q 032146           99 CIAIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        99 ~~~v~---d~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +|.|+   |+++++++|+++|+++...+       .+.+.+++.|||||.|||++.
T Consensus        66 ~f~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           66 GWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             EEEECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence            99997   69999999999999976432       346889999999999999986

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.75  E-value=6.9e-17  Score=114.53  Aligned_cols=114  Identities=15%  Similarity=0.110  Sum_probs=81.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  103 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~  103 (146)
                      ..+.|+.|.|+|++++++||+++||+++.........  ..+.+..++..+..+. ...      +.......|++|.|+
T Consensus       163 ~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~v~  233 (282)
T 3oxh_A          163 GTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQ--NYRVLKAGDAEVGGCM-EPP------MPGVPNHWHVYFAVD  233 (282)
T ss_dssp             TSEEEEEEECSCHHHHHHHHHHHHCCEEEEC---------CEEEEETTEEEEEEE-CCS------STTCCSEEEEEEECS
T ss_pred             CccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCc--ceEEEEcCCccEeeec-CCC------CCCCCCeEEEEEEeC
Confidence            4589999999999999999999999998864311111  2244555554433222 111      111123478999999


Q ss_pred             CHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeecC
Q 032146          104 DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVDG  146 (146)
Q Consensus       104 d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~~  146 (146)
                      |+++++++++++|+++..++    .+++.++++|||||.|+|+++++
T Consensus       234 dvd~~~~~~~~~G~~~~~~p~~~~~~~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          234 DADATAAKAAAAGGQVIAEPADIPSVGRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEEC-
T ss_pred             CHHHHHHHHHHcCCEEecCCeEcCCCeEEEEEECCCCCEEEEEecCC
Confidence            99999999999999986532    45889999999999999999864

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.74  E-value=3.5e-17  Score=117.41  Aligned_cols=108  Identities=20%  Similarity=0.290  Sum_probs=86.8

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC----eEEEEEeeCCCCCCCCCCCCCCCcc
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDR   96 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~   96 (146)
                      +.+.+++|+.|.|+|++++++||+++|||++....+      ..+++..++    ..+.|....           ..+..
T Consensus         4 ~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~~~~   66 (310)
T 3b59_A            4 SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQGADEHHVVQLRRAD-----------ENRID   66 (310)
T ss_dssp             CCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEECTTSCCSCSEEEEECS-----------SCEEE
T ss_pred             eecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC------CeEEEEECCCCCCEEEEEEECC-----------CCCee
Confidence            578999999999999999999999999999877532      346677655    566665422           12357


Q ss_pred             EEEEEe---CCHHHHHHHHHHCCCeEecc------CCCceEEEEECCCCCeEEEEeec
Q 032146           97 HTCIAI---RDVSKLKMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        97 hl~~~v---~d~~~~~~~l~~~G~~~~~~------~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |++|.|   +|+++++++|+++|+++...      +.+.+.+++.||+||.|||++..
T Consensus        67 ~~~~~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  124 (310)
T 3b59_A           67 VIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDV  124 (310)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEECC
T ss_pred             EEEEEeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEcc
Confidence            999999   68999999999999987543      24678999999999999999764

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.74  E-value=2.6e-17  Score=117.29  Aligned_cols=113  Identities=12%  Similarity=0.221  Sum_probs=81.7

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCC---------CCCceEEEEEeCCe--EEEEEeeCCCCCCCCCCC
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD---------KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPE   90 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~---------~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~   90 (146)
                      .+.+++|+.|.|+|++++++||+++|||++.......         ......+|+..++.  .+.+...+          
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~----------  208 (300)
T 2zyq_A          139 GEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPMP----------  208 (300)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCSEEEESSC----------
T ss_pred             CCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCccEEEEecCC----------
Confidence            4578999999999999999999999999986432111         10123456665432  44444311          


Q ss_pred             CCCCccEEEEEeCCHHH---HHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEee
Q 032146           91 HGGRDRHTCIAIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        91 ~~~~~~hl~~~v~d~~~---~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ...+..|++|.|+|+++   ++++|+++|+++...+     .+.+.+|++|||||+|||++.
T Consensus       209 ~~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~  270 (300)
T 2zyq_A          209 TSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCE  270 (300)
T ss_dssp             CSSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEEC
T ss_pred             CCCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeC
Confidence            12346899999998665   5999999999986432     236789999999999999864

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.74  E-value=1.8e-17  Score=118.37  Aligned_cols=109  Identities=17%  Similarity=0.181  Sum_probs=83.2

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC--eEEEEEeeCCCCCCCCCCCCCCCccEEE
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTC   99 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hl~   99 (146)
                      ++.+++||.|.|+|++++++||+++|||++..+...     ..+++..++  ..+.+.......         .+..|++
T Consensus         4 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~l~~~~~~~~~~l~~~~~~~---------~~~~~~~   69 (307)
T 1mpy_A            4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ-----GRVYLKAWTEVDKFSLVLREADE---------PGMDFMG   69 (307)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT-----SCEEEECTTCCBSCSEEEEECSS---------CEEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecCC-----CcEEEEecCCCCceEEEEccCCC---------CCcceEE
Confidence            478999999999999999999999999999875431     125566532  223333222111         2458999


Q ss_pred             EEe---CCHHHHHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEee
Q 032146          100 IAI---RDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       100 ~~v---~d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      |.|   +|+++++++|+++|+++...+     .+.+.+++.|||||.|||++.
T Consensus        70 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (307)
T 1mpy_A           70 FKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYAD  122 (307)
T ss_dssp             EEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESC
T ss_pred             EEeCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEc
Confidence            999   799999999999999876543     356899999999999999985

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.74  E-value=1.1e-16  Score=115.74  Aligned_cols=110  Identities=18%  Similarity=0.316  Sum_probs=83.2

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe--EEEEEeeCCCCCCCCCCCCCCCccEEEEEe
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAI  102 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v  102 (146)
                      .+.|+.|.|+|++++++||+++|||++.......    ..+|+..++.  .+++.....  .    ...+.+..|++|.|
T Consensus       159 ~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~----~~~~l~~g~~~~~l~l~~~~~--~----~~~~~~~~hiaf~v  228 (330)
T 3zi1_A          159 PVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEK----QRALLGYADNQCKLELQGVKG--G----VDHAAAFGRIAFSC  228 (330)
T ss_dssp             SEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTT----TEEEEESSTTSCEEEEEECSS--C----CCCBTTCCEEEEEE
T ss_pred             ceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCC----cEEEEEeCCceEEEEECCCCC--C----CCCCCCCceEEEEE
Confidence            4789999999999999999999999998765432    2466777654  444433221  1    11223457899999


Q ss_pred             C--CHHHHHHHHHHCCCeEecc--------CCCceEEEEECCCCCeEEEEee
Q 032146          103 R--DVSKLKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       103 ~--d~~~~~~~l~~~G~~~~~~--------~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +  |+++++++|+++|+++..+        ..+.+.+|++|||||.|||++.
T Consensus       229 ~~~dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~  280 (330)
T 3zi1_A          229 PQKELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGD  280 (330)
T ss_dssp             CGGGHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEH
T ss_pred             EcccHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEe
Confidence            6  8999999999999997432        2356899999999999999985

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.73  E-value=1.1e-16  Score=113.51  Aligned_cols=116  Identities=16%  Similarity=0.170  Sum_probs=82.7

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeE-EEEEeeCCCCCCCCCCCCCCCccEEEEEe
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEM-IHLMELPNPDPLSGRPEHGGRDRHTCIAI  102 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~hl~~~v  102 (146)
                      ..++|+.|.|+|++++++||+++||+++......... ...+.+..++.. ..+.......     +.......+++|.|
T Consensus        31 g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~-~~~~~~~~~g~~~~~l~~~~~~~-----~~~~~~~~~~~~~v  104 (282)
T 3oxh_A           31 GTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGG-GVYSMATLNGEAVAAIAPMPPGA-----PEGMPPIWNTYIAV  104 (282)
T ss_dssp             TSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC------CCEEEEEETTEEEEEEEECCSCC--------CCCEEEEEEEC
T ss_pred             CCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCc-cCEEEEEeCCeeeEeeccCCCCC-----CCCCCCcEEEEEEe
Confidence            4699999999999999999999999998765332110 023445555543 3343332211     11122347899999


Q ss_pred             CCHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeec
Q 032146          103 RDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       103 ~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      +|+++++++|+++|+++..++    ..++.+++.||+||.|+|++..
T Consensus       105 ~d~d~~~~~l~~~G~~~~~~p~~~~~~g~~~~~~DP~G~~i~l~~~~  151 (282)
T 3oxh_A          105 DDVDAVVDKVVPGGGQVMMPAFDIGDAGRMSFITDPTGAAVGLWQAN  151 (282)
T ss_dssp             SCHHHHHTTTTTTTCEEEEEEEEETTTEEEEEEECTTCCEEEEEEES
T ss_pred             CCHHHHHHHHHHCCCEEEECCEecCCCeEEEEEECCCCCEEEEEEcc
Confidence            999999999999999986432    3568899999999999999875

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.73  E-value=1e-16  Score=116.36  Aligned_cols=109  Identities=13%  Similarity=0.245  Sum_probs=84.5

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeC-C---eEEEEEeeCCCCCCCCCCCCCCC
Q 032146           19 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-A---EMIHLMELPNPDPLSGRPEHGGR   94 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~-~---~~~~l~~~~~~~~~~~~~~~~~~   94 (146)
                      +++.+.+++||.|.|+|++++++||+++|||++..+..      ..+++... +   ..+.+...+           ..+
T Consensus         5 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~g   67 (339)
T 3lm4_A            5 ARFDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKITEAP-----------EAG   67 (339)
T ss_dssp             GGGSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET------TEEEEECTTCSSSCSEEEEECS-----------SCE
T ss_pred             CCCCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC------CEEEEEecCCCCceEEEEeeCC-----------CCC
Confidence            34678999999999999999999999999999987632      23555552 1   233333221           123


Q ss_pred             ccEEEEEeCC---HHHHHHHHHHCCCeEeccC---CCceEEEEECCCCCeEEEEee
Q 032146           95 DRHTCIAIRD---VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        95 ~~hl~~~v~d---~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ..|++|.|+|   +++++++|+++|+++...+   .+++.+++.|||||.|||+..
T Consensus        68 ~~~~af~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~  123 (339)
T 3lm4_A           68 MGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQSPDGHNLQLLWE  123 (339)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHTTCCEEEECCSTTBCCEEEEECTTCCEEEEECC
T ss_pred             cceEEEEeCCHHHHHHHHHHHHHCCCceeeccCCCCceEEEEEECCCCCEEEEEEe
Confidence            6899999997   9999999999999986543   347899999999999999864

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.72  E-value=9.3e-17  Score=115.18  Aligned_cols=107  Identities=16%  Similarity=0.224  Sum_probs=83.0

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe--EEEEEeeCCCCCCCCCCCCCCCccEE
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHT   98 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hl   98 (146)
                      ..+.+++|+.|.|+|++++++||+++|||++.....     ...+|+..++.  .+.+...+            .+..|+
T Consensus       137 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-----~~~~fl~~~~~~~~l~l~~~~------------~g~~hi  199 (310)
T 3b59_A          137 GVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG-----DFMCFLRCNSAHHRIAILPGP------------PCLNHV  199 (310)
T ss_dssp             CCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET-----TTEEEEESSSBSCSEEEEESS------------SEEEEE
T ss_pred             CcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC-----CeEEEEecCCCcceEEEECCC------------CceEEE
Confidence            467899999999999999999999999999886532     13466666433  34443311            236899


Q ss_pred             EEEeCCHHHH---HHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEee
Q 032146           99 CIAIRDVSKL---KMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        99 ~~~v~d~~~~---~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +|.|+|++++   +++|+++|+++...+     ...+.+|++|||||.||+.+.
T Consensus       200 ~f~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  253 (310)
T 3b59_A          200 AYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSE  253 (310)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeC
Confidence            9999998777   999999999875432     345789999999999999874

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.71  E-value=7.7e-16  Score=101.26  Aligned_cols=115  Identities=11%  Similarity=0.082  Sum_probs=77.6

Q ss_pred             eeEEEEeCC--HHHHHHHHhhhcCCeecccc-------CCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCC--CCCc
Q 032146           27 HHVGILCEN--LERSLEFYQNILGLEINEAR-------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEH--GGRD   95 (146)
Q Consensus        27 ~hv~l~v~d--~~~~~~FY~~~lg~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~   95 (146)
                      .++.|.|+|  ++++++||+++||+++....       ......+..+.+..++..+.+.........  ....  +.+ 
T Consensus        26 i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~~l~l~~~~~~~~~--~~~~~~~~g-  102 (166)
T 1xy7_A           26 FKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGF--STAKSEGSG-  102 (166)
T ss_dssp             EEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTC--CCCCTTSCC-
T ss_pred             EEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCeEEEEeCCCcccCC--ccccCCCCc-
Confidence            467899999  99999999999999987543       111122234556667776666542111000  0111  222 


Q ss_pred             cEEEEEeCCHHHHHHHHHHCCCeEeccCC-----CceEEEEECCCCCeEEEEeec
Q 032146           96 RHTCIAIRDVSKLKMILDKAGISYTLSKS-----GRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        96 ~hl~~~v~d~~~~~~~l~~~G~~~~~~~~-----g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      .|++|.|+|+++++++|+++|++ ..++.     ..+.++++||+||.|+|.+..
T Consensus       103 ~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~~r~~~v~DP~G~~~~l~~~~  156 (166)
T 1xy7_A          103 VTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVELGFKGKVTDPFGVTWIFAEKK  156 (166)
T ss_dssp             CEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHTTEEEEEECTTSCEEEEEC--
T ss_pred             EEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcccEEEEEECCCCCEEEEEeec
Confidence            58999999999999999999998 65431     168999999999999998754

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.71  E-value=6.4e-17  Score=115.59  Aligned_cols=112  Identities=15%  Similarity=0.118  Sum_probs=78.8

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCC--CC-CceEEEEEeCCe--EEEEEeeCCCCCCCCCCCCCCCcc
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KL-PYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR   96 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~--~~-~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~   96 (146)
                      .+.+++|+.|.|+|++++++|| ++|||++.......  .. ....+|+..++.  .+.+...          ....+..
T Consensus       143 ~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~  211 (305)
T 2wl9_A          143 EGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHSLAFGVG----------PMDKRIN  211 (305)
T ss_dssp             TTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSSCSEEECCS----------CCSSSEE
T ss_pred             CCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCceEEEEecC----------CCCCCce
Confidence            3568999999999999999999 99999986432110  00 113355554432  2333211          1124468


Q ss_pred             EEEEEeCC---HHHHHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEee
Q 032146           97 HTCIAIRD---VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        97 hl~~~v~d---~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      |++|.|+|   +++++++|+++|+++...+     .+.+.+|++|||||+||+++.
T Consensus       212 hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  267 (305)
T 2wl9_A          212 HLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWG  267 (305)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeC
Confidence            99999998   6667889999999986432     235678999999999999874

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.69  E-value=8.2e-17  Score=117.51  Aligned_cols=127  Identities=14%  Similarity=0.230  Sum_probs=91.5

Q ss_pred             CCceeeeeeeEEEEeC--CHHHHHHHHhhhcCCeeccccC--CCCCCceEEEEEeC--CeEEEEEeeCCCCCCCC-----
Q 032146           19 IDYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARP--HDKLPYRGAWLWVG--AEMIHLMELPNPDPLSG-----   87 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~--d~~~~~~FY~~~lg~~~~~~~~--~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~-----   87 (146)
                      ..+.+.+|+|+++.|+  |++++++||+++|||+......  ........+++..+  ...+.|+..........     
T Consensus       152 ~~~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~l~~~~~~~~~~~~~~~~  231 (357)
T 2r5v_A          152 GDVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFL  231 (357)
T ss_dssp             TTCCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTSCCEEEEEEECTTSBCCHHHHHH
T ss_pred             CCCCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCCCEEEEEeeecCCCCCchhHHHH
Confidence            3466889999999999  9999999999999999875421  11222345666663  35788877553211100     


Q ss_pred             CCCCCCCccEEEEEeCCHHHHHHHHHHCCCeEeccC------CCc---------------eEEEEECCCCCeEEEEeec
Q 032146           88 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK------SGR---------------PAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        88 ~~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~------~g~---------------~~~~~~DpdG~~ie~~~~~  145 (146)
                      ....+.+.+|+||.|+|+++++++|+++|+++...+      .+.               ..+|.+||||+++|+++.+
T Consensus       232 ~~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~~  310 (357)
T 2r5v_A          232 KDHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTAS  310 (357)
T ss_dssp             HHHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBCC
T ss_pred             HhcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEccC
Confidence            001235679999999999999999999999976543      111               3789999999999998843

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.69  E-value=2e-16  Score=112.52  Aligned_cols=112  Identities=13%  Similarity=0.240  Sum_probs=80.4

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCC---CCCCceEEEEEeCC--eEEEEEeeCCCCCCCCCCCCCCCcc
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPH---DKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDR   96 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~---~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~   96 (146)
                      .+.+++|+.|.|+|++++++||+++|||++......   +......+|+..++  ..+.+...+          ...+..
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~----------~~~~~~  208 (297)
T 1lgt_A          139 GEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAAFP----------LPKRIH  208 (297)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCC----------CSSSEE
T ss_pred             CccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCcceEEEEcCC----------CCCCce
Confidence            457899999999999999999999999998753211   00011345555543  245554311          124468


Q ss_pred             EEEEEeCCHHHHH---HHHHHCCCeEeccC----C-CceEEEEECCCCCeEEEEee
Q 032146           97 HTCIAIRDVSKLK---MILDKAGISYTLSK----S-GRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        97 hl~~~v~d~~~~~---~~l~~~G~~~~~~~----~-g~~~~~~~DpdG~~ie~~~~  144 (146)
                      |++|.|+|++++.   ++ +++|+++...+    . ..+.+|++|||||+|||++.
T Consensus       209 hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  263 (297)
T 1lgt_A          209 HFMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWS  263 (297)
T ss_dssp             EEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecC
Confidence            9999999988776   88 99999886532    2 24568999999999999874

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.69  E-value=1.3e-16  Score=113.92  Aligned_cols=111  Identities=14%  Similarity=0.146  Sum_probs=76.7

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCC--CC-CceEEEEEeCCe--EEEEEeeCCCCCCCCCCCCCCCccE
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KL-PYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH   97 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~--~~-~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~h   97 (146)
                      ..+++|+.|.|+|++++++|| ++|||++.......  .. ....+|+..++.  .+.+...         + ...+..|
T Consensus       147 ~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~h  215 (302)
T 2ehz_A          147 DQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARDHSIAFGAM---------P-AAKRLNH  215 (302)
T ss_dssp             GGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSBSCSEEECSC---------C-CSSSEEE
T ss_pred             CCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCCCcEEEEecC---------C-CCCceeE
Confidence            358999999999999999999 99999986432110  10 123345544432  2222211         0 1144689


Q ss_pred             EEEEeCCHHH---HHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEee
Q 032146           98 TCIAIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        98 l~~~v~d~~~---~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++|.|+|+++   ++++|+++|+++..++     .+.+.+|++|||||.||+++.
T Consensus       216 iaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~  270 (302)
T 2ehz_A          216 LMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWR  270 (302)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEEC
Confidence            9999998765   6779999999986432     235788999999999999864

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.69  E-value=1.5e-16  Score=112.92  Aligned_cols=113  Identities=17%  Similarity=0.212  Sum_probs=79.7

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCC--CC-CceEEEEEeCC--eEEEEEeeCCCCCCCCCCCCCCCc
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KL-PYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRD   95 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~--~~-~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~   95 (146)
                      +.+.+++|+.|.|+|++++++||+++|||++.......  .. ....+|+..++  ..+.+...+         . ..+.
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~  207 (292)
T 1kw3_B          138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFP---------I-PKRI  207 (292)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCS---------C-SSSE
T ss_pred             cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcceEEEecCC---------C-CCce
Confidence            45678999999999999999999999999987532210  00 11335555543  234443211         0 2446


Q ss_pred             cEEEEEeCCHHH---HHHHHHHCCCeEeccC----C-CceEEEEECCCCC-eEEEEee
Q 032146           96 RHTCIAIRDVSK---LKMILDKAGISYTLSK----S-GRPAIFTRDPDAN-ALEFTQV  144 (146)
Q Consensus        96 ~hl~~~v~d~~~---~~~~l~~~G~~~~~~~----~-g~~~~~~~DpdG~-~ie~~~~  144 (146)
                      .|++|.|+|+++   .+++|+ +|+++...+    . +.+.+|++||||| .|||.+.
T Consensus       208 ~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~  264 (292)
T 1kw3_B          208 HHFMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWG  264 (292)
T ss_dssp             EEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             EEEEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEEC
Confidence            899999998665   677999 999876542    2 3567899999999 9999874

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.67  E-value=1.1e-15  Score=112.57  Aligned_cols=127  Identities=13%  Similarity=0.097  Sum_probs=94.5

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCC--CCCCceEEEEEeCCeEEEEEeeCCCCCC----CC--CCC
Q 032146           19 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH--DKLPYRGAWLWVGAEMIHLMELPNPDPL----SG--RPE   90 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~--~~~   90 (146)
                      ++|.+.+++||.+.|+|++++++||+++|||++......  .........+..++..+.|.........    ..  ...
T Consensus        16 ~~~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~~   95 (381)
T 1t47_A           16 DPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAE   95 (381)
T ss_dssp             CCSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CCCcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecCCEEEEEecCCCCCCcchhHHHHHHHh
Confidence            568899999999999999999999999999999875321  1112244556668888888875332211    00  011


Q ss_pred             CCCCccEEEEEeCCHHHHHHHHHHCCCeEeccC------CC-ceEEEEECCCCCeEEEEeec
Q 032146           91 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK------SG-RPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        91 ~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~------~g-~~~~~~~DpdG~~ie~~~~~  145 (146)
                      ++.+..|+||+|+|+++++++|+++|+++..++      .+ .+.+.++||+|++++|+++.
T Consensus        96 ~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~  157 (381)
T 1t47_A           96 HGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  157 (381)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             cCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecC
Confidence            245678999999999999999999999986543      11 25688999999999999863

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.67  E-value=2.7e-15  Score=106.32  Aligned_cols=108  Identities=13%  Similarity=0.061  Sum_probs=77.5

Q ss_pred             eeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC----eEEEEEeeCCCCCCCCCCCCCCCccEEEEE
Q 032146           26 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIA  101 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~  101 (146)
                      ..++.+.|.|++++++||+++||+++.......   ...+.+..++    ..+.+...+.        ..++...+++|.
T Consensus       184 ~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~  252 (301)
T 2zw5_A          184 AVITELPVRDVAATLRLVEAALGARTAFAIGDP---PEFAEAALTPWSAGPRFRLAAVPG--------PGPVEPVRLHLD  252 (301)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT---EEEEEEESSSSSSSSEEEEEECCC--------SSCCCCCEEEEE
T ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC---ccEEEEEcCCCccccccccccCCC--------cCCCCceEEEEE
Confidence            456788999999999999999999987433211   1223455554    3333321111        111234689999


Q ss_pred             eC-CHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEee
Q 032146          102 IR-DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       102 v~-d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      |+ |+++++++++++|+.+..++    .|.+.+++.|||||.|+|.++
T Consensus       253 v~~dvd~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          253 AAGTADSLHRRAVDAGARVDGPPVRRPWGRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             cCccHHHHHHHHHHcCCccccCcccCCCcceEEEEECCCCCEEEeeCC
Confidence            99 99999999999999986432    467899999999999999985

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.66  E-value=2.8e-16  Score=117.10  Aligned_cols=129  Identities=13%  Similarity=0.118  Sum_probs=94.5

Q ss_pred             CCCCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCC--CCCceEEEEEeCCeEEEEEeeCCCCC----------
Q 032146           17 DKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KLPYRGAWLWVGAEMIHLMELPNPDP----------   84 (146)
Q Consensus        17 ~~~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~----------   84 (146)
                      .++.|.+.+++||.|.|+|++++++||+++|||++.......  ......+++..++..+.|........          
T Consensus        17 ~~~~~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g~~~l~L~~~~~~~~~~~~~~~~~~   96 (424)
T 1sqd_A           17 KSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTT   96 (424)
T ss_dssp             CCCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCC
T ss_pred             CCccccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCCCEEEEEecCCCCcccccccccccc
Confidence            345788999999999999999999999999999987654321  22334455667888888887632210          


Q ss_pred             --CCCC---------CCCCCCccEEEEEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeec
Q 032146           85 --LSGR---------PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        85 --~~~~---------~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                        .+..         ..++.+..|+||+|+|+++++++++++|+++...+    .......+++|.|++++|++++
T Consensus        97 ~p~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~~~~~~i~~~Gg~~~~lvd~~  172 (424)
T 1sqd_A           97 ASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYK  172 (424)
T ss_dssp             CSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEEC
T ss_pred             cccccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCceEEEEEEcCCCcEEEEEecC
Confidence              0000         02345689999999999999999999999986543    2235667778888888888764

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.63  E-value=1.1e-15  Score=111.52  Aligned_cols=123  Identities=15%  Similarity=0.092  Sum_probs=89.8

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCC--CCCCCCCccEE
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHT   98 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~hl   98 (146)
                      |.+.+++||.+.|+|++++++||+++|||++.........  ..+.+..++..+.|...........  ...++.+..|+
T Consensus         1 ~~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~g~g~~~i   78 (357)
T 2r5v_A            1 MQNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQGQVTLVLTEPTSDRHPAAAYLQTHGDGVADI   78 (357)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEETTEEEEEEEESSTTSHHHHHHHHHSSEEEEE
T ss_pred             CCCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeCCEEEEEeCCCCCCCHHHHHHHhcCCeEEEE
Confidence            4578999999999999999999999999998765321111  3344566777877776322211000  01124567899


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEeccC----CC-ceEEEEECCCCCeEEEEeec
Q 032146           99 CIAIRDVSKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        99 ~~~v~d~~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DpdG~~ie~~~~~  145 (146)
                      +|.|+|+++++++++++|+++...+    .| ...+.+.||+|..++|++..
T Consensus        79 af~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~  130 (357)
T 2r5v_A           79 AMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRD  130 (357)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECC
T ss_pred             EEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecc
Confidence            9999999999999999999986433    22 36789999999999998863

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.61  E-value=1.2e-14  Score=106.40  Aligned_cols=114  Identities=18%  Similarity=0.251  Sum_probs=81.2

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe--EEEEEeeCCCCCCCCCCCCCCCcc
Q 032146           19 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR   96 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~   96 (146)
                      ....+.+|+|++|.|+|++++.+||++ |||.+.............+|+..++.  .+.+...           ...+++
T Consensus       146 ~~~~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~hH~la~~~~-----------~~~~lh  213 (365)
T 4ghg_A          146 SAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGTVHDTALTGG-----------NGPRLH  213 (365)
T ss_dssp             CTTCCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSSSCSEEEEES-----------SBSEEE
T ss_pred             ccccCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCcccceeeecC-----------CCCcee
Confidence            344577899999999999999999976 99988765444444444566665543  2223221           113579


Q ss_pred             EEEEEeCCHHHH---HHHHHHCCCe--Eecc-----CCCceEEEEECCCCCeEEEEee
Q 032146           97 HTCIAIRDVSKL---KMILDKAGIS--YTLS-----KSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        97 hl~~~v~d~~~~---~~~l~~~G~~--~~~~-----~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      |++|+|+|++++   +++|+++|+.  +...     .....++|++||+||+||+...
T Consensus       214 Hvaf~v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~  271 (365)
T 4ghg_A          214 HVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQ  271 (365)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             EEEEecCCHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcC
Confidence            999999987765   6788889985  3332     2346789999999999998753

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.61  E-value=7.9e-14  Score=90.02  Aligned_cols=111  Identities=14%  Similarity=0.020  Sum_probs=76.4

Q ss_pred             EEEEeC-CHHHHHHHHhhhcCCeecccc--CC-------C-C--CCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCc
Q 032146           29 VGILCE-NLERSLEFYQNILGLEINEAR--PH-------D-K--LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRD   95 (146)
Q Consensus        29 v~l~v~-d~~~~~~FY~~~lg~~~~~~~--~~-------~-~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   95 (146)
                      ..|.|. |+++|++||+++||+++....  ..       . .  .....+.+..++..+.+.... ..  ...+. ..+ 
T Consensus         7 p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~l~~~d~~-~~--~~~~~-~~g-   81 (149)
T 1u6l_A            7 PYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNH-PA--YPYEG-IKG-   81 (149)
T ss_dssp             EEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECC-TT--SCCCC-CCS-
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCEEEEEEcCC-Cc--cCCCC-CCc-
Confidence            678888 999999999999999987531  10       0 0  122334466677766554321 11  01111 122 


Q ss_pred             cEEEEEeCC---HHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeec
Q 032146           96 RHTCIAIRD---VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        96 ~hl~~~v~d---~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      .+++|.|+|   +++++++|. .|.++..++    +|.+.++++||+|+.|+|.+..
T Consensus        82 ~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~r~~~v~Dp~G~~w~l~~~~  137 (149)
T 1u6l_A           82 CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCEQ  137 (149)
T ss_dssp             EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEEEEEEEECTTSCEEEEEESC
T ss_pred             eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcccceEEEECCCCCEEEEEEec
Confidence            589999998   789999985 788876543    5668899999999999998754

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.60  E-value=1e-13  Score=88.13  Aligned_cols=113  Identities=12%  Similarity=0.110  Sum_probs=78.2

Q ss_pred             eeeeEEEEeC--CHHHHHHHHhhhc-CCeecc--ccCC----CCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCc
Q 032146           25 SVHHVGILCE--NLERSLEFYQNIL-GLEINE--ARPH----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRD   95 (146)
Q Consensus        25 ~l~hv~l~v~--d~~~~~~FY~~~l-g~~~~~--~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   95 (146)
                      ++. ..|.+.  |++++++||+++| |+++..  +...    .......+.+..++..+.+...... +  ..+ . ...
T Consensus         6 ~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~-~--~~~-~-~~~   79 (136)
T 1u7i_A            6 RVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVR-H--AFD-F-TPA   79 (136)
T ss_dssp             EEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSC-C--SCC-C-CTT
T ss_pred             cce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCEEEEEECCCCC-C--CCC-C-CCc
Confidence            444 667776  9999999999999 999874  1211    1122234456677776655443210 1  011 1 122


Q ss_pred             cEEEEEeCC---HHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEee
Q 032146           96 RHTCIAIRD---VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        96 ~hl~~~v~d---~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ..++|.|+|   +|+++++|. .|.++..++    +|.+.++++||+||.|+|.++
T Consensus        80 ~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           80 FSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGFSQRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             EEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSEEEEEECTTSCEEEEEEC
T ss_pred             eEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCCCcceEEEEECCCCCEEEEEec
Confidence            579999999   999999999 999876543    567889999999999999874

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.59  E-value=5e-14  Score=104.80  Aligned_cols=130  Identities=12%  Similarity=0.100  Sum_probs=93.3

Q ss_pred             CCCCCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCC--CCCceEEEEEeCCeEEEEEeeCCCCC---CCCC--
Q 032146           16 SDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KLPYRGAWLWVGAEMIHLMELPNPDP---LSGR--   88 (146)
Q Consensus        16 ~~~~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~--   88 (146)
                      +.++++.+.+++||.|.|+|++++++||++.|||++.......  ......+.+..++..+.|........   ....  
T Consensus        22 ~~~~~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~~~l~L~~~~~~~~~~~~~p~~~  101 (418)
T 1sp8_A           22 PRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPS  101 (418)
T ss_dssp             CCCCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTT
T ss_pred             CCCccccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCCEEEEEecCCCCccccccccccc
Confidence            3445788999999999999999999999999999987654321  12334566677888888887643311   0000  


Q ss_pred             ----------CCCCCCccEEEEEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeec
Q 032146           89 ----------PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        89 ----------~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                                ..++.+..|+||+|+|+++++++++++|+++...+    ...+...+++|.|..+.|+++.
T Consensus       102 ~~~~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~~~~~~i~~~Gg~~~~lvd~~  172 (418)
T 1sp8_A          102 FSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYP  172 (418)
T ss_dssp             CCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECC
T ss_pred             ccchhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCceEEEEEecCCCEEEEEEccC
Confidence                      12345689999999999999999999999986543    2234456667777777776653

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.55  E-value=3.6e-14  Score=104.61  Aligned_cols=126  Identities=14%  Similarity=0.111  Sum_probs=95.6

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCC--CCCceEEEEEeCCeEEEEEeeCCCCC-CCC--CCCCCC
Q 032146           19 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KLPYRGAWLWVGAEMIHLMELPNPDP-LSG--RPEHGG   93 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~--~~~~~~   93 (146)
                      ..+.+.+++||.+.|+|++++++||+++|||+.......+  ......+.+..++..++|..+..+.. +..  ...++.
T Consensus         5 ~~~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~i~~~L~~p~~p~s~~~a~fl~~hG~   84 (393)
T 3isq_A            5 ERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNKEMGDHLVKHGD   84 (393)
T ss_dssp             SSCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCS
T ss_pred             CCCCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCCEEEEEecCCCCCchHHHHHHHhcCC
Confidence            4577899999999999999999999999999998754322  12223456777888988887544322 110  112356


Q ss_pred             CccEEEEEeCCHHHHHHHHHHCCCeEeccC------CC-ceEEEEECCCCCeEEEEee
Q 032146           94 RDRHTCIAIRDVSKLKMILDKAGISYTLSK------SG-RPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~------~g-~~~~~~~DpdG~~ie~~~~  144 (146)
                      +..|+||+|+|+++++++++++|+++..++      .| .....+++|.|..+.|++.
T Consensus        85 Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr  142 (393)
T 3isq_A           85 GVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEK  142 (393)
T ss_dssp             EEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             cEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEecc
Confidence            789999999999999999999999986544      12 3567899999999998875

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.52  E-value=1.2e-14  Score=106.19  Aligned_cols=122  Identities=12%  Similarity=0.046  Sum_probs=88.1

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEE
Q 032146           19 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   98 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl   98 (146)
                      ++|.+.+++||.+.|+|++++++|| +.|||++..+....    ....+..++..+.+...+..........++.+..|+
T Consensus         6 ~~~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~~----~~~l~~~g~~~l~l~~~~~~~~~~~~~~~g~gv~~i   80 (357)
T 1cjx_A            6 NPMGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRSK----NVHLYRQGEINLILNNEPNSIASYFAAEHGPSVCGM   80 (357)
T ss_dssp             CTTCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESSS----SEEEEEETTEEEEEECCSSSHHHHHHHHHSSEEEEE
T ss_pred             CCcccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCCe----eEEEEecCCEEEEEECCCCchhhhhhhhcCCeEEEE
Confidence            4688999999999999999999999 79999988653311    234556677776666422210000001234567999


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEeccCCC---ceEEEEECCCCCeEEEEeec
Q 032146           99 CIAIRDVSKLKMILDKAGISYTLSKSG---RPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        99 ~~~v~d~~~~~~~l~~~G~~~~~~~~g---~~~~~~~DpdG~~ie~~~~~  145 (146)
                      +|+|+|+++++++++++|+.+...+.+   .....+++|+|..++|+++.
T Consensus        81 af~V~D~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~~~~gg~~~~~vd~~  130 (357)
T 1cjx_A           81 AFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRF  130 (357)
T ss_dssp             EEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCC
T ss_pred             EEEeCCHHHHHHHHHHcCCEEeecCCCCCcEEEEeeeCCCCeEEEEECCC
Confidence            999999999999999999998665422   34567888888888887654

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.52  E-value=5.8e-13  Score=85.05  Aligned_cols=111  Identities=9%  Similarity=0.106  Sum_probs=74.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhc-CCeeccc--cCC----CCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCcc
Q 032146           24 VSVHHVGILCENLERSLEFYQNIL-GLEINEA--RPH----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR   96 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~l-g~~~~~~--~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~   96 (146)
                      .++...-+.+.|.++|++||+++| |+++...  ...    +...+..+.+.+++..+.+..... .    .+   .. .
T Consensus         4 ~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~~~m~~d~~~-~----~~---~~-~   74 (139)
T 1tsj_A            4 PKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANS-G----TE---LP-I   74 (139)
T ss_dssp             CSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC---------------C-C
T ss_pred             CceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCEEEEEECCCC-C----CC---ce-E
Confidence            445544444569999999999999 9998742  111    112334455677777654443211 1    01   11 4


Q ss_pred             EEEEEeCC---HHHHHHHHHHCCCeEecc----CCCceEEEEECCCCCeEEEEee
Q 032146           97 HTCIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        97 hl~~~v~d---~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      .|++.++|   +++++++|. .|.++..+    .+|.+..+++||+|+.|+|...
T Consensus        75 sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  128 (139)
T 1tsj_A           75 SLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (139)
T ss_dssp             CEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             EEEEECCCHHHHHHHHHHHh-CCCEEeecccccCCCceEEEEECCCCCEEEEeec
Confidence            58999987   788899998 69887654    3688999999999999999875

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.51  E-value=1.3e-13  Score=101.52  Aligned_cols=127  Identities=13%  Similarity=0.089  Sum_probs=87.5

Q ss_pred             CCceeeeeeeEEEEeC--CHHHHHHHHhhhcCCeeccccC-----CCCCCceEEEEEe--CCeEEEEEeeCCCCCCCCC-
Q 032146           19 IDYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARP-----HDKLPYRGAWLWV--GAEMIHLMELPNPDPLSGR-   88 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~--d~~~~~~FY~~~lg~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~-   88 (146)
                      ....+.+|+|+++.|+  |++++++||+++|||+......     .........++..  +...+.|............ 
T Consensus       178 ~~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g~v~i~l~~~~~~~~~s~~~  257 (381)
T 1t47_A          178 AHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQID  257 (381)
T ss_dssp             SSCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHH
T ss_pred             CCCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCCcEEEEEecCCcCCCccHHH
Confidence            3356789999999999  9999999999999999876532     1222334455544  2346777776421111000 


Q ss_pred             ----CCCCCCccEEEEEeCCHHHHHHHHHHCCCeEeccCCC---------------------ceEEEEECCCCCeEEEEe
Q 032146           89 ----PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSG---------------------RPAIFTRDPDANALEFTQ  143 (146)
Q Consensus        89 ----~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~g---------------------~~~~~~~DpdG~~ie~~~  143 (146)
                          ...+.+++||||.|+|+++++++|+++|+++...+..                     ....+-.||+|..+++++
T Consensus       258 ~~l~~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift  337 (381)
T 1t47_A          258 EYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFT  337 (381)
T ss_dssp             HHHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEB
T ss_pred             HHHHHhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEec
Confidence                0134568999999999999999999999998654311                     113566788888777766


Q ss_pred             ec
Q 032146          144 VD  145 (146)
Q Consensus       144 ~~  145 (146)
                      .+
T Consensus       338 ~~  339 (381)
T 1t47_A          338 KP  339 (381)
T ss_dssp             CC
T ss_pred             cC
Confidence            43

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.51  E-value=2.1e-12  Score=85.02  Aligned_cols=112  Identities=13%  Similarity=0.009  Sum_probs=78.7

Q ss_pred             eEEEEeCCHHHHHHHHhhhcCCeeccccCCC--------------CCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCC
Q 032146           28 HVGILCENLERSLEFYQNILGLEINEARPHD--------------KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGG   93 (146)
Q Consensus        28 hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   93 (146)
                      ...|.+.|.+++++||+++||.++.......              ...+-.+.+.+++..+.+....  ..   .+..+.
T Consensus        28 ~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~~lm~~D~~--g~---~~~~~~  102 (172)
T 3l20_A           28 FPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGVKVLCSDSF--GR---ADKINN  102 (172)
T ss_dssp             EEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTEEEEEEECT--TC---CCCCCS
T ss_pred             EEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCEEEEEECCC--CC---CCCCCC
Confidence            3556777999999999999999976432110              1233457788888877766532  11   111222


Q ss_pred             CccEEEEEe--------CCHHHHHHHHHHCC-CeEecc----CCCceEEEEECCCCCeEEEEeec
Q 032146           94 RDRHTCIAI--------RDVSKLKMILDKAG-ISYTLS----KSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        94 ~~~hl~~~v--------~d~~~~~~~l~~~G-~~~~~~----~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                       ...+++.+        +|+++++++|.+.| +++..+    ++|.+.++++||+|+.|+|...+
T Consensus       103 -~~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          103 -GISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             -SEEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEEEEEECTTSCEEEEEEEC
T ss_pred             -cEEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEEEEEECCCCCEEEEEeCC
Confidence             24577777        57899999999999 687654    36788999999999999997643

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.50  E-value=1.3e-14  Score=105.93  Aligned_cols=127  Identities=13%  Similarity=0.095  Sum_probs=86.3

Q ss_pred             CCceeeeeeeEEEEeC--CHHHHHHHHhhhcCCeeccccCCCC--CCc--eEEEEEeCCeEEEEEee-CCCCCCCC---C
Q 032146           19 IDYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDK--LPY--RGAWLWVGAEMIHLMEL-PNPDPLSG---R   88 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~--d~~~~~~FY~~~lg~~~~~~~~~~~--~~~--~~~~~~~~~~~~~l~~~-~~~~~~~~---~   88 (146)
                      ....+.+|+|+++.|+  |++++++||+++|||+.........  ...  ..++...+...++|... ........   .
T Consensus       152 ~~~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~~~~~~~~~~~~~~~  231 (357)
T 1cjx_A          152 VGAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLM  231 (357)
T ss_dssp             CTTSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHH
T ss_pred             CCCCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCCCEEEEEeeecCCCCChHHHhHH
Confidence            3457889999999999  9999999999999999876432111  111  12222235568888876 32211100   0


Q ss_pred             CCCCCCccEEEEEeCCHHHHHHHHHHCCCeEec-cCC-------------Cc--------eEEEEEC----CCCCeEEEE
Q 032146           89 PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL-SKS-------------GR--------PAIFTRD----PDANALEFT  142 (146)
Q Consensus        89 ~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~-~~~-------------g~--------~~~~~~D----pdG~~ie~~  142 (146)
                      ...+.+.+|+||.|+|+++++++|+++|+++.. .+.             +.        ...+-.|    |+|++++++
T Consensus       232 ~~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqif  311 (357)
T 1cjx_A          232 QFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIF  311 (357)
T ss_dssp             HHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEE
T ss_pred             hcCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEe
Confidence            113456799999999999999999999999865 330             11        1366677    788888887


Q ss_pred             eec
Q 032146          143 QVD  145 (146)
Q Consensus       143 ~~~  145 (146)
                      ..+
T Consensus       312 t~~  314 (357)
T 1cjx_A          312 SET  314 (357)
T ss_dssp             BCC
T ss_pred             ccC
Confidence            653

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.41  E-value=2.2e-12  Score=96.12  Aligned_cols=104  Identities=16%  Similarity=0.183  Sum_probs=74.9

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCC-----CCceEEEEEe--CCeEEEEEeeCCC--CCC-CCC
Q 032146           19 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWV--GAEMIHLMELPNP--DPL-SGR   88 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~l~~~~~~--~~~-~~~   88 (146)
                      ....+.+|+|+++.|+|++++++||+++|||+.........     ..+...++..  +...+.|......  ... ...
T Consensus       196 ~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~~~l~l~e~~~~~~~~s~i~~  275 (424)
T 1sqd_A          196 LDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQT  275 (424)
T ss_dssp             CCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHH
T ss_pred             CcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCCcEEEEEecccccCCCcchhhh
Confidence            44568899999999999999999999999999987653221     2334555554  3458888876421  111 000


Q ss_pred             ---CCCCCCccEEEEEeCCHHHHHHHHHH----CCCeEecc
Q 032146           89 ---PEHGGRDRHTCIAIRDVSKLKMILDK----AGISYTLS  122 (146)
Q Consensus        89 ---~~~~~~~~hl~~~v~d~~~~~~~l~~----~G~~~~~~  122 (146)
                         ...+.|++||||.|+|+++.+++|++    +|+++...
T Consensus       276 fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~  316 (424)
T 1sqd_A          276 YLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPS  316 (424)
T ss_dssp             HHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCC
T ss_pred             hhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecC
Confidence               02356789999999999999999999    89998654

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.38  E-value=1.9e-11  Score=83.74  Aligned_cols=108  Identities=15%  Similarity=0.081  Sum_probs=75.8

Q ss_pred             eeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe--EEEEEeeCCCCCCCCCCCCCCCccEE---EE
Q 032146           26 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHT---CI  100 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hl---~~  100 (146)
                      ..++.|.|+|.++.++||+++|||++..+..      ..+.+..++.  .+.|-..+....     ....|..|+   ++
T Consensus        11 ~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~~~~L~lEEsp~~~~-----~~~~Glkh~a~i~i   79 (244)
T 3e0r_A           11 RIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTGLEKLVLEEAPSMRT-----RKVEGRKKLARLIV   79 (244)
T ss_dssp             EEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCEEEEEEECCTTTC-----BCCCSSCSEEEEEE
T ss_pred             EEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCCcceEEEEeCCCccc-----ccccccceeeeEEE
Confidence            4568999999999999999999999988655      4466665433  444444332211     223556777   59


Q ss_pred             EeCCHHHHHHHHHHCCCeEe--ccCCCceEEEEECCCCCeEEEEeec
Q 032146          101 AIRDVSKLKMILDKAGISYT--LSKSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       101 ~v~d~~~~~~~l~~~G~~~~--~~~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      .+++-.++..-|.. +..+.  .....++.+|+.||+||.||++..+
T Consensus        80 ~vp~~~el~~lL~~-~~~~~~~~~gdhgyA~yl~dPEGn~ieiyae~  125 (244)
T 3e0r_A           80 KVENPLEIEGILSK-TDSIHRLYKGQNGYAFEIFSPEDDLILIHAED  125 (244)
T ss_dssp             EESSHHHHHHHHTT-CSCCSEEEECSSSEEEEEECTTCCEEEEECCS
T ss_pred             EcCCHHHHHHHHhc-ccccccccccCCcEEEEEECCCCCeEEEEEcC
Confidence            99988888655554 55543  3334577899999999999998644

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.38  E-value=5.4e-11  Score=75.76  Aligned_cols=109  Identities=9%  Similarity=0.033  Sum_probs=75.9

Q ss_pred             EEEEeC-CHHHHHHHHhhhcC-Ceeccc--cC----CCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           29 VGILCE-NLERSLEFYQNILG-LEINEA--RP----HDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        29 v~l~v~-d~~~~~~FY~~~lg-~~~~~~--~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      ..|.++ |.+++++||+++|| .++...  ..    .....+-.+.+.+++..+.+........    ...+. ...+++
T Consensus        13 P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~~lm~~d~~~~~~----~~~~~-~~~l~l   87 (138)
T 3oms_A           13 TFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQEFMCIDSYVNHN----FTFTP-AMSLYV   87 (138)
T ss_dssp             EEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEECSSCCS----CCCCT-TSCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCEEEEEEcCCCCCC----CCCCC-CEEEEE
Confidence            446667 89999999999999 565431  11    1223344677888888777764332111    11111 257999


Q ss_pred             EeCC---HHHHHHHHHHCCCeEecc----CCCceEEEEECCCCCeEEEEe
Q 032146          101 AIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       101 ~v~d---~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DpdG~~ie~~~  143 (146)
                      .++|   +++++++|. .|.++..+    ++|.+..+++||+|+.|.|..
T Consensus        88 ~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~~~~~~~Dp~G~~W~i~~  136 (138)
T 3oms_A           88 TCETEEEIDTVFHKLA-QDGAILMPLGSYPFSKKFGWLNDKYGVSWQLTL  136 (138)
T ss_dssp             EESSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEE
T ss_pred             EcCCHHHHHHHHHHHH-cCCeEecCcccccCCcEEEEEECCCCCEEEEEe
Confidence            9999   999999995 57777544    367789999999999999865

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.37  E-value=4e-12  Score=94.61  Aligned_cols=104  Identities=15%  Similarity=0.162  Sum_probs=74.7

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCC-----CCceEEEEEe--CCeEEEEEeeCCC-CCCC--CC
Q 032146           19 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWV--GAEMIHLMELPNP-DPLS--GR   88 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~l~~~~~~-~~~~--~~   88 (146)
                      ....+.+|+|+++.|+|++++++||+++|||+.........     ......++..  +...+.|...... ....  ..
T Consensus       193 ~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~i~l~l~e~~~~~~~~s~i~~  272 (418)
T 1sp8_A          193 ADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQT  272 (418)
T ss_dssp             CCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHH
T ss_pred             CCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCCcEEEEEeecccccCCCcchhh
Confidence            44568899999999999999999999999999887543211     2345566654  3457777776421 1110  00


Q ss_pred             C---CCCCCccEEEEEeCCHHHHHHHHHH----CCCeEecc
Q 032146           89 P---EHGGRDRHTCIAIRDVSKLKMILDK----AGISYTLS  122 (146)
Q Consensus        89 ~---~~~~~~~hl~~~v~d~~~~~~~l~~----~G~~~~~~  122 (146)
                      .   ..+.+++||||.|+|+++.+++|++    +|+++...
T Consensus       273 fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~  313 (418)
T 1sp8_A          273 FLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAP  313 (418)
T ss_dssp             HHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCC
T ss_pred             hhhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccC
Confidence            0   1356789999999999999999999    79998654

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.34  E-value=3.4e-12  Score=94.12  Aligned_cols=103  Identities=12%  Similarity=0.065  Sum_probs=74.8

Q ss_pred             CCceeeeeeeEEEEeCC--HHHHHHHHhhhcCCeeccccC-----CCCCCceEEEEEe--CCeEEEEEeeCCCCCCCC--
Q 032146           19 IDYGVVSVHHVGILCEN--LERSLEFYQNILGLEINEARP-----HDKLPYRGAWLWV--GAEMIHLMELPNPDPLSG--   87 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d--~~~~~~FY~~~lg~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~--   87 (146)
                      +...+.+|+|+++.|+|  ++++++||+++|||+.....+     .....++...+..  +...++|..+........  
T Consensus       167 ~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g~v~i~L~ep~~~~~~s~I~  246 (393)
T 3isq_A          167 PKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKKSQIQ  246 (393)
T ss_dssp             CCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTTSSCEEEEEEEECCSBCCHHH
T ss_pred             CCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCCCCEEEEEecCCCCCCCCHHH
Confidence            34568999999999998  999999999999999876533     1122334444544  345888887654211100  


Q ss_pred             C---CCCCCCccEEEEEeCCHHHHHHHHHHCCCeEec
Q 032146           88 R---PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  121 (146)
Q Consensus        88 ~---~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~  121 (146)
                      .   ...+.|++|+||.|+|+++.+++|+++|+++..
T Consensus       247 ~fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~  283 (393)
T 3isq_A          247 EYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLS  283 (393)
T ss_dssp             HHHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCC
T ss_pred             HHHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCC
Confidence            0   113567899999999999999999999999754

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.70  E-value=8.2e-07  Score=57.80  Aligned_cols=103  Identities=12%  Similarity=0.010  Sum_probs=70.9

Q ss_pred             EEEEeC-CHHHHHHHHhhhc-CCeecc--ccCC-----CCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEE
Q 032146           29 VGILCE-NLERSLEFYQNIL-GLEINE--ARPH-----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC   99 (146)
Q Consensus        29 v~l~v~-d~~~~~~FY~~~l-g~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~   99 (146)
                      .-|..+ |.+++++||+++| |.++..  +...     +...+-.+.+.+++..+.+..... .    .+ ...+ ..|+
T Consensus         9 PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~~~m~~d~~p-~----~~-~~~~-~sl~   81 (163)
T 1u69_A            9 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGP-A----FR-HSEA-FSFQ   81 (163)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECCT-T----CC-CCTT-EEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCEEEEEECCCC-C----cC-CCCc-eEEE
Confidence            345666 9999999999999 988763  2211     123455677888888776654211 1    11 1122 4688


Q ss_pred             EEeCC---HHHHHHHHHHCCCeEeccCCCceEEEEECCCCCeEEEEee
Q 032146          100 IAIRD---VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       100 ~~v~d---~~~~~~~l~~~G~~~~~~~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +.++|   +++++++|.+.|.++.      +...++||.|+.|.|...
T Consensus        82 v~~~d~~e~d~~~~~L~~~Gg~v~------~~G~v~D~fGv~W~i~~~  123 (163)
T 1u69_A           82 VATDDQAETDRLWNAIVDNGGEES------ACGWCRDKWGISWQITPR  123 (163)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCEEC------STTEEECTTSCEEEEEEH
T ss_pred             EEeCCHHHHHHHHHHHHhCCCEEE------EEEEEECCCCCEEEEEeE
Confidence            88887   6777899987888776      334899999999998753

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=98.41  E-value=1.2e-06  Score=70.28  Aligned_cols=121  Identities=18%  Similarity=0.212  Sum_probs=76.8

Q ss_pred             eeeeeeeEEEEe---CCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe--CCeEEEEEeeCCCCCC-----------
Q 032146           22 GVVSVHHVGILC---ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV--GAEMIHLMELPNPDPL-----------   85 (146)
Q Consensus        22 ~~~~l~hv~l~v---~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~-----------   85 (146)
                      .+++...+.+..   .-++++++||++++++........   .+-.+++.-  +...+.+...+.....           
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (941)
T 3opy_B            6 LFNGTSFITLFAPNISLLQASIDFYTNFLGFAIRKNSNQ---KLFWLQLEEDQNNVSIQLILDPEHAASVSQIDQNIRNL   82 (941)
T ss_dssp             CSCEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSSCSC---CC---EECCTTSCCEEEEECSSCSCHHHHHHHHHHHCC
T ss_pred             eecceeEEEEEeCCHHHHHHHHHHHHhhccceeccccCC---cceeEEEecCCCeEEEEEEeccccchhHHHHHHHHhhh
Confidence            355666666665   578999999999999987664331   112344422  2336665544211100           


Q ss_pred             C--CCCCCC-CCccEEEEEeCCHHHHHHHHHHCCCeEeccCC--CceEEEEECCCCCeEEEEeec
Q 032146           86 S--GRPEHG-GRDRHTCIAIRDVSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        86 ~--~~~~~~-~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~--g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      .  .....+ +...|++|.++|++++.+.|.+.+.++-..|.  +...+|..||+||+|+|.+.+
T Consensus        83 ~~~~~~~dW~~~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~~~e~yt~DPlGNvIgfs~~~  147 (941)
T 3opy_B           83 TRSLYRKDWRSIQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEISPFEVYTVDPLGSLIGFSGFK  147 (941)
T ss_dssp             C----------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSCSCEEECCSSCCEEEECC-CCS
T ss_pred             hcccccccccccCceEEEEeCCHHHHHHHHHhcCCccccCCCcCCCceEEeECCCCCEEEEeccC
Confidence            0  001111 22259999999999999999999988766554  788999999999999998754

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=98.30  E-value=7.9e-07  Score=62.54  Aligned_cols=91  Identities=12%  Similarity=0.220  Sum_probs=64.5

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcC-----CeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCC---------C--
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILG-----LEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP---------L--   85 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---------~--   85 (146)
                      |+.+|+|+.+.|.+++        .||     |.+.........+....-+.+++..+||+...+...         .  
T Consensus        21 M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fdg~YLElIai~~~~~~~~~~~~~~~~~   92 (274)
T 3p8a_A           21 MILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYINENYIELLDVENNEKLKKMAKTIEGGV   92 (274)
T ss_dssp             CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECSSSEEEEEEESCHHHHHHHTTSTGGGT
T ss_pred             ccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeCCEEEEEEeecCcccccccccccCccc
Confidence            4588999999999884        457     776653322333334455556889999999875421         0  


Q ss_pred             -CCC----CCCCCCccEEEEEeCCHHHHHHHHHHCCCeEe
Q 032146           86 -SGR----PEHGGRDRHTCIAIRDVSKLKMILDKAGISYT  120 (146)
Q Consensus        86 -~~~----~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~  120 (146)
                       ...    ...+.++.+++++++|+++..++|.+.|+.+.
T Consensus        93 ~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~  132 (274)
T 3p8a_A           93 AFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVV  132 (274)
T ss_dssp             CTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEE
T ss_pred             hHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcC
Confidence             000    13456789999999999999999999999764

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=97.33  E-value=0.00044  Score=47.51  Aligned_cols=89  Identities=9%  Similarity=0.091  Sum_probs=60.6

Q ss_pred             eeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeC--
Q 032146           26 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--  103 (146)
Q Consensus        26 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~--  103 (146)
                      + ||.|.|.|.+++  ||.+ +|+                     +..+.++.....+.+ ..+...-++..+-|.++  
T Consensus       153 i-~I~LnV~d~~~s--Fy~~-~~~---------------------~~~~~F~~a~G~dl~-~~~~~t~gLe~l~~~v~~~  206 (244)
T 3e0r_A          153 I-SMELHLPTDIES--FLES-SEI---------------------GASLDFIPAQGQDLT-VDNTVTWDLSMLKFLVNEL  206 (244)
T ss_dssp             E-EEEEEECTTCCC--SCCH-HHH---------------------TTTEEEEECCCTTTT-CCTTSBSSEEEEEEEESSC
T ss_pred             E-EEEEEcCchHHH--Hhhc-cCC---------------------cccEEEEcccCCCCC-CCCCCccCceEEEEEeCHH
Confidence            6 999999999998  9986 333                     112333343333322 23333445677778777  


Q ss_pred             CHHHHHHHHHHCCCeEeccCCCceEEEEECCCCCeEEEEe
Q 032146          104 DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       104 d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DpdG~~ie~~~  143 (146)
                      |+.++.++|.+.|..+.   ...+.+.+.||.|+.|=|.+
T Consensus       207 dl~~l~~~L~~~g~~id---kk~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          207 DIASLRQKFESTEYFIP---KSEKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             CHHHHHHHTTTSCEECC---TTCCEEEEECTTSCEEEEEE
T ss_pred             HHHHHHHHHHhCCceEc---ccCCEEEEECCCCCEEEEEE
Confidence            78899999998887333   23677899999999998765

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=97.19  E-value=0.0054  Score=42.45  Aligned_cols=34  Identities=12%  Similarity=0.182  Sum_probs=30.9

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeecccc
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEAR   55 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~   55 (146)
                      ..+.+++||+|.|+|++++.+|| ++|||+...+.
T Consensus       154 ~~i~glghV~L~v~d~~~~~~fl-~~LG~~~~~~~  187 (252)
T 3pkv_A          154 DQLLSIGEINITTSDVEQAATRL-KQAELPVKLDQ  187 (252)
T ss_dssp             GGCCEEEEEEEECSCHHHHHHHH-HHTTCCCCGGG
T ss_pred             HHCcEeeeEEEEeCCHHHHHHHH-HHcCCCcccCC
Confidence            45789999999999999999999 99999998764

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=95.70  E-value=0.11  Score=32.00  Aligned_cols=53  Identities=11%  Similarity=0.195  Sum_probs=41.3

Q ss_pred             CCccEEEEEeCCHHHHHHHHHH-CCCeEeccC----------CCceEEEEECCCCCeEEEEeec
Q 032146           93 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK----------SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        93 ~~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~----------~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      .++.|++|.|.|+++..+.+.+ .|.++....          .....+++.-++|..+++.+.+
T Consensus        18 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   81 (156)
T 3kol_A           18 RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEP   81 (156)
T ss_dssp             CCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECT
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecC
Confidence            5679999999999999999987 799987521          1234567777788999998753

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=95.49  E-value=0.33  Score=39.77  Aligned_cols=49  Identities=24%  Similarity=0.266  Sum_probs=36.5

Q ss_pred             cEEEEEeCCHHHHHHHHHHCCCeEeccCCCceEEEEECCCCCeEEEEee
Q 032146           96 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        96 ~hl~~~v~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ..+.|.+.|++++.+.|.+..+......-....+|..||-||.|.|...
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~~~~~~~  173 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEIGAEIIPSKIDLVEFSTRDPMGDVISFSSY  173 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHSSCCBCCCC--CCCEEEESSSEEEEECCSS
T ss_pred             ceEEEEeCcHHHHHHHhhhcccccCCCCCCceeEEEecCCCCEEeeecC
Confidence            4689999999999999998744333333335679999999999987643

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=95.30  E-value=0.11  Score=30.33  Aligned_cols=50  Identities=22%  Similarity=0.335  Sum_probs=38.2

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEECCCCCeEEEEee
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++.|+.+.|.|+++..+.+.+ .|.++.... +....++..++|..+.+.+.
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~-~~~~~~~~~~~~~~l~l~~~   53 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTR-GNAFAVMRDNDGFILTLMKG   53 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEE-TTTEEEEECTTCCEEEEEEC
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEeccC-CCcEEEEEcCCCcEEEEEeC
Confidence            368999999999999999987 799886543 23446666667788888764

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=95.08  E-value=0.1  Score=31.47  Aligned_cols=51  Identities=12%  Similarity=0.147  Sum_probs=38.0

Q ss_pred             CccEEEEEeCCHHHHHHHHHHCCCeEecc----C-CCceEEEEECCCCCeEEEEeec
Q 032146           94 RDRHTCIAIRDVSKLKMILDKAGISYTLS----K-SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~~G~~~~~~----~-~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      ++.|+++.|+|+++..+.+...|.++...    + .+.+.+++.. ++..+|++++.
T Consensus         7 ~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~   62 (133)
T 3hdp_A            7 KVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAPD   62 (133)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEES
T ss_pred             eeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEecC
Confidence            47899999999999999999889987543    1 2344555544 67788888753

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=95.04  E-value=0.041  Score=34.85  Aligned_cols=61  Identities=15%  Similarity=0.208  Sum_probs=43.2

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCC-CCCceEEEE---EeCCeEEEEEeeCCCCCC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWL---WVGAEMIHLMELPNPDPL   85 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~-~~~~~~~~~---~~~~~~~~l~~~~~~~~~   85 (146)
                      .++.|+++.|.|++++.+...+ .|.++....+.. ..+...+|+   ..+|..++|+........
T Consensus        78 ~g~~Hiaf~V~Did~~~~~l~~-~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~~~~~  142 (161)
T 3oa4_A           78 EGIHHIAIGVKSIEERIQEVKE-NGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKEQAEN  142 (161)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHH-TTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCCCCCC
T ss_pred             CCeEEEEEEECCHHHHHHHHHH-CCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCCcccc
Confidence            4789999999999999999976 798876542211 112345666   335779999997766543

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=94.99  E-value=0.077  Score=37.18  Aligned_cols=37  Identities=14%  Similarity=0.143  Sum_probs=32.2

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeecccc
Q 032146           19 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEAR   55 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~   55 (146)
                      .+....+|.+|.+.+.|++++++.|.++||.+.....
T Consensus       184 HpnGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~~  220 (274)
T 3p8a_A          184 YFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEEN  220 (274)
T ss_dssp             TCCTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEEC
T ss_pred             CCCccceEEEEEEEeCCHHHHHHHHHHHhCCCccccC
Confidence            3445789999999999999999999999999987654

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=94.91  E-value=0.15  Score=30.30  Aligned_cols=52  Identities=15%  Similarity=0.158  Sum_probs=39.9

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEecc----CCCceEEEEECCCCCeEEEEeec
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~----~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      .+.|++|.|.|+++..+.+.+ .|.++...    ..+...+++..++|..+++.+.+
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   59 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRT   59 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEET
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecC
Confidence            368999999999999999965 69887543    23445667776778999998764

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=94.61  E-value=0.18  Score=30.06  Aligned_cols=50  Identities=20%  Similarity=0.316  Sum_probs=37.0

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEeccC----CCceEEEEECCCCCeEEEEee
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++.|+++.|.|+++..+.+.+ .|.++....    .+...+++. .++..+++.+.
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~   59 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVN-LGNTKMELLHP   59 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEE-CSSSEEEEEEE
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEe-cCCEEEEEEec
Confidence            368999999999999999988 799876431    234445554 46678888764

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=94.61  E-value=0.2  Score=30.86  Aligned_cols=52  Identities=12%  Similarity=0.075  Sum_probs=37.8

Q ss_pred             CCccEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEE-EEECCCCCeEEEEee
Q 032146           93 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAI-FTRDPDANALEFTQV  144 (146)
Q Consensus        93 ~~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~-~~~DpdG~~ie~~~~  144 (146)
                      .++.|++|.|.|+++..+.+.+ .|.++.....+.... +..+..+..+++.+.
T Consensus        27 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   80 (141)
T 3ghj_A           27 KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARRWNFLWVSGRAGMVVLQEE   80 (141)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             ceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCCcEEEEEecCCCcEEEEecc
Confidence            5578999999999999999976 799987654333333 333445778888764

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=94.56  E-value=0.12  Score=31.60  Aligned_cols=53  Identities=11%  Similarity=0.014  Sum_probs=40.3

Q ss_pred             CCccEEEEEeCCHHHHHHHHHH-CCCeEeccC----CCceEEEEECCCC-----CeEEEEeec
Q 032146           93 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK----SGRPAIFTRDPDA-----NALEFTQVD  145 (146)
Q Consensus        93 ~~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~----~g~~~~~~~DpdG-----~~ie~~~~~  145 (146)
                      .++.|+++.|.|+++..+.+.+ .|.++....    .+...+++..+++     ..+++.+..
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~   70 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPL   70 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEES
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecC
Confidence            3468999999999999999975 799876432    2445677777775     789998753

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=94.52  E-value=0.089  Score=32.46  Aligned_cols=51  Identities=12%  Similarity=0.251  Sum_probs=38.5

Q ss_pred             CccEEEEEeCCHHHHHHHHHHCCCeEeccC---------------CCceEEEEECCCC-CeEEEEee
Q 032146           94 RDRHTCIAIRDVSKLKMILDKAGISYTLSK---------------SGRPAIFTRDPDA-NALEFTQV  144 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~---------------~g~~~~~~~DpdG-~~ie~~~~  144 (146)
                      ++.|+++.|.|+++..+.+.+.|.++....               .+...+++.-++| ..|++++.
T Consensus        11 ~i~hv~l~v~D~~~a~~FY~~lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~   77 (153)
T 1ss4_A           11 RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   77 (153)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             ceeeEEEEeCCHHHHHHHHHHCCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEe
Confidence            468999999999999999988899875321               2345566776766 78888874

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=94.47  E-value=0.15  Score=31.95  Aligned_cols=55  Identities=16%  Similarity=0.114  Sum_probs=38.2

Q ss_pred             CCCCCccEEEEEeCCHHHHHHHHHH-CCCeEecc------------------CCCceEEEEECCCCCeEEEEeec
Q 032146           90 EHGGRDRHTCIAIRDVSKLKMILDK-AGISYTLS------------------KSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        90 ~~~~~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~------------------~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      ....++.|+++.|.|+++..+.+.+ .|.++...                  ..+.+.+++. ..+..+|++++.
T Consensus        15 ~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~g~~~leL~~~~   88 (159)
T 3gm5_A           15 LDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFE-LGPLQLELIEPD   88 (159)
T ss_dssp             CCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEE-ETTEEEEEEEEC
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEe-cCCEEEEEEEEC
Confidence            3345679999999999999999986 89875421                  1223444443 357788988763

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=93.94  E-value=0.17  Score=30.79  Aligned_cols=50  Identities=14%  Similarity=0.136  Sum_probs=36.3

Q ss_pred             CccEEEEEeCCHHHHHHHHHHCCCeEeccCCCceEEEEECCCCCeEEEEe
Q 032146           94 RDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DpdG~~ie~~~  143 (146)
                      ++.|+.|.|.|+++..+.+.+.|.++....+....+.+.-++|..+.+.+
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~   53 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYRKLGVEIPAEADSAPHTEAVLDGGIRLAWDT   53 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTTCCCCGGGGGCSEEEEECTTSCEEEEEE
T ss_pred             eeeEEEEEECCHHHHHHHHHHcCCcEEecCCCCceEEEEcCCCeEEEEec
Confidence            35899999999999999998889887654322234444445777888765

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=93.63  E-value=0.25  Score=29.11  Aligned_cols=50  Identities=12%  Similarity=0.034  Sum_probs=36.2

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEecc----CCCceEEEEECCCCCeEEEEee
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~----~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++.|+++.|.|+++..+.+.+ .|.++...    ..+.+.+++.-+++ .+++.+.
T Consensus         5 ~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-~l~l~~~   59 (126)
T 2p25_A            5 EIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ-ELEIFIS   59 (126)
T ss_dssp             CCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTE-EEEEEEC
T ss_pred             ccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCe-EEEEEec
Confidence            468999999999999999986 89997642    12334455555555 7888764

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=93.21  E-value=0.41  Score=28.39  Aligned_cols=54  Identities=20%  Similarity=0.302  Sum_probs=34.5

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEE
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLM   77 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~   77 (146)
                      -.++.|+.+.|.|++++.+...+ .|.++.............+++.- .+..++|+
T Consensus        79 ~~g~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  133 (134)
T 3l7t_A           79 ACGLRHLAFYVEDVEASRQELIA-LGIRVEEVRYDDYTGKKMAFFFDPDGLPLELH  133 (134)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHH-HTCCCCCCEECTTSCCEEEEEECTTCCEEEEE
T ss_pred             CCCeEEEEEEECCHHHHHHHHHh-CCCcccceeccCCCceEEEEEECCCCCEEEEe
Confidence            35789999999999999998876 78877543222122223444443 34455554

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=92.94  E-value=0.32  Score=29.43  Aligned_cols=49  Identities=10%  Similarity=0.011  Sum_probs=35.5

Q ss_pred             ccEEEEEeCCHHHHHHHHHH-CCCeEeccCCC---ceEEEEECCCCCeEEEEee
Q 032146           95 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSG---RPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        95 ~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g---~~~~~~~DpdG~~ie~~~~  144 (146)
                      +.|++|.|.|+++..+.+.+ .|.++.....+   .....+.. ++..++|.+.
T Consensus         6 i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~   58 (136)
T 2rk0_A            6 VSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-GGLSIVLREH   58 (136)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-TSCEEEEEEE
T ss_pred             ccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-CCCEEEEEeC
Confidence            57999999999999999976 79987643221   22333334 7888998876

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=92.82  E-value=0.18  Score=30.51  Aligned_cols=50  Identities=8%  Similarity=0.045  Sum_probs=33.7

Q ss_pred             CccEEEEEeCCHHHHHHHHHHCCCeEecc-CCCceEEEEECCCCCeEEEEe
Q 032146           94 RDRHTCIAIRDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~~G~~~~~~-~~g~~~~~~~DpdG~~ie~~~  143 (146)
                      .+.|++|.|.|+++..+...+.|.++... ...+..+++...+|..+++..
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~   56 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYRIIGFQFTASKVDKGSEVHRAVHNGVEFSLYS   56 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHTCCCEEC-----CCEEEEEETTEEEEEEE
T ss_pred             eEEEEEEEcCCHHHHHHHHHHCCCEEecccCCCCCEEEEEeCCCeEEEEEE
Confidence            36899999999999999998889887655 221234444424566666644

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=92.70  E-value=0.47  Score=29.26  Aligned_cols=48  Identities=21%  Similarity=0.230  Sum_probs=33.7

Q ss_pred             CCccEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEECCCCCeEEEEe
Q 032146           93 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus        93 ~~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DpdG~~ie~~~  143 (146)
                      .++.|++|.|.|+++..+.+.+ .|.++.....+..  ++. .+|..+++.+
T Consensus        22 ~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~~~~--~l~-~~~~~l~l~~   70 (152)
T 3huh_A           22 DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQNRK--ALI-FGAQKINLHQ   70 (152)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEETTTEE--EEE-ETTEEEEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccCCeE--EEE-eCCeEEEEec
Confidence            3468999999999999999998 8999876543322  221 2345666654

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=92.46  E-value=1  Score=26.81  Aligned_cols=50  Identities=16%  Similarity=0.157  Sum_probs=36.5

Q ss_pred             ccEEEEEeCCHHHHHHHHHH-CCCeEeccC---CCc-eEEEEECCC---CCeEEEEee
Q 032146           95 DRHTCIAIRDVSKLKMILDK-AGISYTLSK---SGR-PAIFTRDPD---ANALEFTQV  144 (146)
Q Consensus        95 ~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~---~g~-~~~~~~Dpd---G~~ie~~~~  144 (146)
                      +.|++|.|.|+++..+.+.+ .|.++....   .+. ..+++.-++   +..+++.+.
T Consensus         3 l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   60 (135)
T 1f9z_A            3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYN   60 (135)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEE
T ss_pred             ceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEc
Confidence            58999999999999999987 799876432   232 345555444   688888764

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=92.09  E-value=0.56  Score=27.85  Aligned_cols=48  Identities=17%  Similarity=0.247  Sum_probs=33.1

Q ss_pred             CCccEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEECCCCCeEEEEe
Q 032146           93 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus        93 ~~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DpdG~~ie~~~  143 (146)
                      .++.|++|.|.|+++..+.+.+ .|.++.....+.  +++.- .|..+++.+
T Consensus         9 ~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~~~~-~~~~~~l~~   57 (133)
T 3ey7_A            9 SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAGR--IALEF-GHQKINLHQ   57 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEEEEETTTE--EEEEE-TTEEEEEEE
T ss_pred             cccCEEEEEECCHHHHHHHHHHccCceEEEecCCe--EEEEc-CCEEEEEEc
Confidence            4568999999999999999987 799987654322  22221 345555554

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=92.06  E-value=0.62  Score=27.98  Aligned_cols=50  Identities=2%  Similarity=-0.134  Sum_probs=35.4

Q ss_pred             CCccEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEECCCCCeEEEEee
Q 032146           93 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        93 ~~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      .++.|+.|.|.|+++..+.+.+ .|.++....+  ..+.+...+|..+.+.+.
T Consensus        12 ~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~l~l~~~   62 (132)
T 3sk2_A           12 ITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP--RYVAFPSSGDALFAIWSG   62 (132)
T ss_dssp             CCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS--SEEEEECSTTCEEEEESS
T ss_pred             ceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC--CEEEEEcCCCcEEEEEeC
Confidence            4579999999999999999886 6887754332  233444456677777643

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=91.46  E-value=1  Score=27.42  Aligned_cols=51  Identities=20%  Similarity=0.183  Sum_probs=37.4

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEeccC---C-CceEEEEECCC---CCeEEEEee
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK---S-GRPAIFTRDPD---ANALEFTQV  144 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~---~-g~~~~~~~Dpd---G~~ie~~~~  144 (146)
                      ++.|+.|.|.|+++..+.+.+ .|.++....   . +...+++.-++   +..+++.+.
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~   66 (144)
T 2c21_A            8 RMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN   66 (144)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEE
T ss_pred             eeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEec
Confidence            468999999999999999976 799986432   1 22345665554   588888875

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=90.32  E-value=1.1  Score=28.65  Aligned_cols=55  Identities=15%  Similarity=0.244  Sum_probs=37.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP   80 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~   80 (146)
                      .+++|+.+.|.|++++.+-.++ .|.++......... ...+++.- .+..++|++..
T Consensus       126 ~g~~hl~f~v~dv~~~~~~l~~-~G~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          126 RGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPDDGKM-KGLAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             CBEEEEEEECSCHHHHHHHHHH-TTCCEEECTTSSSS-TTCEEEECTTCCEEEEECGG
T ss_pred             CceeEEEEEECCHHHHHHHHHH-CCCeEeeCCccCCc-ceEEEEECCCCCEEEEEEcc
Confidence            4788999999999999999876 79888763221111 12344544 56688888754

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=90.30  E-value=0.85  Score=28.25  Aligned_cols=49  Identities=6%  Similarity=-0.086  Sum_probs=35.4

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEECCCCCeEEEEee
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++.|+.|.|.|+++..+.+.+ .|.++....+  ..+++.-++|..+.+...
T Consensus         6 ~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~~~~~~~~g~~l~l~~~   55 (148)
T 3rhe_A            6 DPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP--TFAMFVMKTGLRLGLWAQ   55 (148)
T ss_dssp             -CEEEEEEESCHHHHHHHHHHHHTCCCSEECS--SEEEEECTTSCEEEEEEG
T ss_pred             cccEEEEEeCCHHHHHHHHHHHcCCEEeccCC--CEEEEEcCCCcEEEEecC
Confidence            368999999999999999887 7988755432  344555457777777643

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=90.24  E-value=1.7  Score=26.67  Aligned_cols=49  Identities=18%  Similarity=0.152  Sum_probs=35.3

Q ss_pred             CCccEEEEEeCCHHHHHHHH----HHCCCeEeccCCCceEEEEECCCCCeEEEEee
Q 032146           93 GRDRHTCIAIRDVSKLKMIL----DKAGISYTLSKSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        93 ~~~~hl~~~v~d~~~~~~~l----~~~G~~~~~~~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      .++.|++|.|.|+++..+.+    ...|.++.....+.. .|+.  ++..++|.+.
T Consensus        19 ~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~~~-~~~~--g~~~l~l~~~   71 (146)
T 3ct8_A           19 GMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSRGK-SYKH--GKTYLVFVQT   71 (146)
T ss_dssp             TSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETTEE-EEEE--TTEEEEEEEC
T ss_pred             cceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCCCc-eEec--CCeEEEEEEc
Confidence            45789999999999999988    458999865433322 3444  5667887764

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=89.95  E-value=1.1  Score=27.57  Aligned_cols=31  Identities=19%  Similarity=0.337  Sum_probs=26.4

Q ss_pred             CCccEEEEEeCCHHHHHHHHHH-CCCeEeccC
Q 032146           93 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK  123 (146)
Q Consensus        93 ~~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~  123 (146)
                      .++.|++|.|.|+++..+.+.+ .|.++....
T Consensus        26 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~   57 (147)
T 3zw5_A           26 RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK   57 (147)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEET
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEecC
Confidence            4568999999999999999988 799987543

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=89.94  E-value=1.6  Score=26.83  Aligned_cols=48  Identities=15%  Similarity=0.099  Sum_probs=35.2

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEECCCCCeEEEEee
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++.|+.|.|.|+++..+.+.+ .|.++....  ...+++.. +|..+++.+.
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~--~~~~~~~~-~~~~l~l~~~   53 (150)
T 3bqx_A            5 QVAVITLGIGDLEASARFYGEGFGWAPVFRN--PEIIFYQM-NGFVLATWLV   53 (150)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTSCCCCSEEC--SSEEEEEC-SSSEEEEEEH
T ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEeecCC--CCEEEEEc-CCEEEEEEec
Confidence            368999999999999999987 798875543  23344443 6778888764

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=89.84  E-value=0.94  Score=27.85  Aligned_cols=49  Identities=8%  Similarity=-0.014  Sum_probs=34.9

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEECCCCCeEEEEee
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++.|+.|.|.|+++..+.+.+ .|.++....++  ..++.-.+|..++|.+.
T Consensus        25 ~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~l~l~~~   74 (144)
T 2kjz_A           25 HPDFTILYVDNPPASTQFYKALLGVDPVESSPT--FSLFVLANGMKLGLWSR   74 (144)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHTCCCSEEETT--EEEEECTTSCEEEEEET
T ss_pred             ceeEEEEEeCCHHHHHHHHHHccCCEeccCCCC--eEEEEcCCCcEEEEEeC
Confidence            568999999999999999986 69877543322  33444445777877653

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=89.03  E-value=2.3  Score=25.03  Aligned_cols=54  Identities=9%  Similarity=0.234  Sum_probs=34.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEe
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   78 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~   78 (146)
                      .+..|+.+.|.|++++.+-..+ .|.++.........+...+++.- .+..++|.+
T Consensus        78 ~~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           78 GGYTGISLITRDIDEAYKTLTE-RGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHH-TTCEESSSCEECTTSCEEEEEECTTCEEEEEEE
T ss_pred             CCeEEEEEEeCCHHHHHHHHHH-CCCEeecCCCcCCCCCEEEEEECCCCCEEEEEe
Confidence            4678999999999999999977 69888642211112223344433 344666553

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=88.73  E-value=1.9  Score=27.44  Aligned_cols=55  Identities=15%  Similarity=0.199  Sum_probs=36.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP   80 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~   80 (146)
                      .++.|+.+.|.|++++.+...+ .|.++..... .......+++.- .+..++|+...
T Consensus       123 ~g~~hi~f~v~dvd~~~~~l~~-~G~~~~~~p~-~~~~~~~~~~~DPdG~~iel~~~~  178 (184)
T 2za0_A          123 RGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPD-DGKMKGLAFIQDPDGYWIEILNPN  178 (184)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHH-TTCCEEECTT-SSSSTTCEEEECTTCCEEEEECTT
T ss_pred             CCeeEEEEEeCCHHHHHHHHHH-CCCeeecCCc-CCCceeEEEEECCCCCEEEEEecC
Confidence            4678999999999999999977 7888765322 111112345544 46688887643

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=88.70  E-value=1.1  Score=27.10  Aligned_cols=49  Identities=14%  Similarity=0.116  Sum_probs=32.8

Q ss_pred             ccEEEEEeCCHHHHHHHHHH-CCCeEeccCCCce-----EEEEECCCCCeEEEEee
Q 032146           95 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRP-----AIFTRDPDANALEFTQV  144 (146)
Q Consensus        95 ~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g~~-----~~~~~DpdG~~ie~~~~  144 (146)
                      +.|+.+.|.|+++..+.+.+ .|.++.....+..     ..++. .+|..+++.+.
T Consensus         5 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-~g~~~l~l~~~   59 (139)
T 1r9c_A            5 LSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFL-IGDIWVAIMQG   59 (139)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEE-ETTEEEEEEEC
T ss_pred             EEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceEEEE-ECCEEEEEEeC
Confidence            68999999999999999976 7998764321111     11222 24667777654

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=88.45  E-value=1.3  Score=26.29  Aligned_cols=29  Identities=17%  Similarity=0.224  Sum_probs=24.3

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEecc
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLS  122 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~  122 (146)
                      ++.|+.+.|.|+++..+.+.+ .|.++...
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~   33 (133)
T 2p7o_A            4 GLSHITLIVKDLNKTTAFLQNIFNAEEIYS   33 (133)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEECC-
T ss_pred             eEEEEEEEcCCHHHHHHHHHHhcCCEEeee
Confidence            368999999999999999976 79987653

>1k4n_A Protein EC4020, protein YECM; structural genomics, A NEW fold of protein, PSI, protein structure initiative; 1.60A {Escherichia coli} SCOP: d.32.1.5

Probab=88.40  E-value=3.9  Score=26.94  Aligned_cols=94  Identities=16%  Similarity=0.139  Sum_probs=57.7

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeec-cccCCCCCCceEEE----EEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEE
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEIN-EARPHDKLPYRGAW----LWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC   99 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~-~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~   99 (146)
                      .++||.++|++.+.+.+|-...+-.-.. .+..-++..+...-    +..++-.+.++..+-+... ..|.  .|+-|+-
T Consensus        43 ~~DHIalRvn~~~~Ae~~~~~l~~~G~llSen~INGRPI~l~~L~qPL~~~~~~I~cvELP~P~~K-~Yp~--eGWEHIE  119 (192)
T 1k4n_A           43 TADHISLRCHQNATAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPGEK-RYPH--EGWEHIE  119 (192)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEECCCSS-CCSS--CEEEEEE
T ss_pred             cCcEEEEecCCHHHHHHHHHHHHHhchhhhccccCCeeEEEEEcCCCceeCCeEEEEEEcCCCCCC-CCCC--CCceEEE
Confidence            6899999999999999999998765432 22211111111111    2236777888777765531 1233  5678999


Q ss_pred             EEeC----CHHHHHHHHH------HCCCeEec
Q 032146          100 IAIR----DVSKLKMILD------KAGISYTL  121 (146)
Q Consensus       100 ~~v~----d~~~~~~~l~------~~G~~~~~  121 (146)
                      |.++    ++++..++++      ..|+++..
T Consensus       120 ~Vlp~~~~t~~~~~~~l~~~~~~~~~gikvK~  151 (192)
T 1k4n_A          120 IVLPGDPETLNARALALLSDEGLSLPGISVKT  151 (192)
T ss_dssp             EECCSCGGGHHHHHHHTSCHHHHHSTTCEEEE
T ss_pred             EEecCCcCCHHHHHHHHhhcccccCCCcEEEe
Confidence            9998    3455444433      35788754

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=87.72  E-value=2.5  Score=25.23  Aligned_cols=46  Identities=11%  Similarity=0.092  Sum_probs=31.6

Q ss_pred             ccEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEECCCCCeEEEEe
Q 032146           95 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus        95 ~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DpdG~~ie~~~  143 (146)
                      +.|+.+.|.|+++..+.+.+ .|.++.....+.  .++. .+|..+++.+
T Consensus         5 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~~~-~~~~~l~l~~   51 (135)
T 1nki_A            5 LNHLTLAVADLPASIAFYRDLLGFRLEARWDQG--AYLE-LGSLWLCLSR   51 (135)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEETTE--EEEE-ETTEEEEEEE
T ss_pred             EeEEEEEeCCHHHHHHHHHHhcCCEEEEcCCCc--eEEe-cCCEEEEEEe
Confidence            58999999999999999987 799986542221  2332 2344566554

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=87.32  E-value=2.4  Score=25.85  Aligned_cols=29  Identities=14%  Similarity=0.288  Sum_probs=24.5

Q ss_pred             CccEEEEEeCCHHHHHHHHHHCCCeEecc
Q 032146           94 RDRHTCIAIRDVSKLKMILDKAGISYTLS  122 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~~G~~~~~~  122 (146)
                      .+.|+.|.|.|+++..+...+.|......
T Consensus         9 rl~~V~L~V~Dl~~s~~FY~~lg~~~~~~   37 (149)
T 4gym_A            9 RLTFVNLPVADVAASQAFFGTLGFEFNPK   37 (149)
T ss_dssp             CCEEEEEEESCHHHHHHHHHHTTCEECGG
T ss_pred             cEEEEEEEeCCHHHHHHHHHHhCCCccee
Confidence            36899999999999999999988776543

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=87.01  E-value=2.4  Score=25.55  Aligned_cols=48  Identities=10%  Similarity=0.070  Sum_probs=33.1

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEECCCCCeEEEEee
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++.|+++.|.|+++..+...+ .|.++.....+.  .++. .+|..+++.+.
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~--~~~~-~~~~~l~l~~~   52 (141)
T 1npb_A            4 SLNHLTLAVSDLQKSVTFWHELLGLTLHARWNTG--AYLT-CGDLWVCLSYD   52 (141)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTSCCEEEEEETTE--EEEE-ETTEEEEEEEC
T ss_pred             eEEEEEEEeCCHHHHHHHHHhccCCEEEeecCCc--EEEE-ECCEEEEEEEC
Confidence            368999999999999999987 799886542221  3333 24555666553

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=86.71  E-value=3.3  Score=24.27  Aligned_cols=53  Identities=11%  Similarity=0.079  Sum_probs=35.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEee
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMEL   79 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~   79 (146)
                      .+..|+.+.|.|++++.+...+ .|.++.....  ....+.+++.- .+..++|...
T Consensus        71 ~~~~~~~f~v~d~~~~~~~l~~-~G~~~~~~~~--~~g~~~~~~~DPdG~~iel~~~  124 (126)
T 2qqz_A           71 AKRAHPAFYVLKIDEFKQELIK-QGIEVIDDHA--RPDVIRFYVSDPFGNRIEFMEN  124 (126)
T ss_dssp             CSSSCEEEEETTHHHHHHHHHH-TTCCCEEECS--STTEEEEEEECTTSCEEEEEEE
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-cCCCccCCCC--CCCeeEEEEECCCCCEEEEEeC
Confidence            4678999999999999998876 6887765432  12233444443 4557777664

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=86.05  E-value=1.6  Score=26.99  Aligned_cols=54  Identities=15%  Similarity=0.192  Sum_probs=35.0

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeC
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP   80 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~   80 (146)
                      ++.|+.+.|.|++++.+-..+ .|.++.......... +.+++.- .+..++|++..
T Consensus        98 g~~~l~f~VdDvda~~~~l~~-~Gv~~~~~p~~~~~g-~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A           98 GIPAASFAVDDIAAEYERLSA-LGVRFTQEPTDMGPV-VTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             TCCSEEEEESCHHHHHHHHHH-TTCCEEEEEEECSSC-EEEEEECSSSCEEEEEEC-
T ss_pred             CceEEEeeechhhhhhhHHhc-CCcEEeeCCEEcCCe-EEEEEECCCCCEEEEEEEC
Confidence            467899999999999998876 788775422111122 4455543 45688887754

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=85.18  E-value=4  Score=24.20  Aligned_cols=30  Identities=17%  Similarity=0.114  Sum_probs=25.4

Q ss_pred             CCccEEEEEeCCHHHHHHHHHH-CCCeEecc
Q 032146           93 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS  122 (146)
Q Consensus        93 ~~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~  122 (146)
                      ..+.|+++.|.|+++..+.+.+ .|.++...
T Consensus         8 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~   38 (135)
T 3rri_A            8 NDVFHLAIPARDLDEAYDFYVTKLGCKLARR   38 (135)
T ss_dssp             TSEEEEEEEESCHHHHHHHHTTTTCCEEEEE
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEeecc
Confidence            3479999999999999999976 79998544

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=84.21  E-value=3.3  Score=23.89  Aligned_cols=53  Identities=15%  Similarity=0.196  Sum_probs=32.7

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEe
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   78 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~   78 (146)
                      ...|+.+.|.|++++.+...+ .|.++.........+.+.+++.- .+..+++.+
T Consensus        64 ~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~  117 (119)
T 2pjs_A           64 DVPDLSIEVDNFDEVHARILK-AGLPIEYGPVTEAWGVQRLFLRDPFGKLINILS  117 (119)
T ss_dssp             CCCSEEEEESCHHHHHHHHHH-TTCCCSEEEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred             ceeEEEEEECCHHHHHHHHHH-CCCccccCCccCCCccEEEEEECCCCCEEEEEe
Confidence            457899999999999998876 68776542111112223444443 345666654

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=84.13  E-value=4.9  Score=24.89  Aligned_cols=59  Identities=8%  Similarity=0.060  Sum_probs=37.5

Q ss_pred             eeeeeeeEEEEe---CCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeCCC
Q 032146           22 GVVSVHHVGILC---ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP   82 (146)
Q Consensus        22 ~~~~l~hv~l~v---~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~   82 (146)
                      .-.++.|+.+.|   .|++++.+-..+ .|.++....... ...+.+++.- .|..++|...+..
T Consensus        73 ~~~g~~hi~f~V~~~~dld~~~~~l~~-~G~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~~~  135 (160)
T 3r4q_A           73 GAVGQGHFCFYADDKAEVDEWKTRFEA-LEIPVEHYHRWP-NGSYSVYIRDPAGNSVEVGEGKLW  135 (160)
T ss_dssp             EEEEECEEEEEESSHHHHHHHHHHHHT-TTCCCCEEEECT-TSCEEEEEECTTCCEEEEEEGGGG
T ss_pred             CCcceeEEEEEeCCHHHHHHHHHHHHH-CCCEEecccccc-CCcEEEEEECCCCCEEEEEeCCCC
Confidence            345789999999   777777777755 587775322211 1234455544 5668999886643

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=83.82  E-value=3.6  Score=24.73  Aligned_cols=29  Identities=17%  Similarity=0.127  Sum_probs=25.0

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEecc
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLS  122 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~  122 (146)
                      .+.|+.|.|.|+++..+.+.+ .|.++...
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~   37 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIES   37 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGG
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecc
Confidence            468999999999999999987 79998643

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=83.59  E-value=4.9  Score=23.59  Aligned_cols=46  Identities=13%  Similarity=0.192  Sum_probs=32.0

Q ss_pred             cEEEEEeCCHHHHHHHHHHCCCeEeccCCCceEEEEECCCCCeEEEEee
Q 032146           96 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        96 ~hl~~~v~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      .++.+.|.|+++..+...+.|.++.... + ..+++.. +|..+++.+.
T Consensus         5 ~~~~l~v~D~~~a~~FY~~LG~~~~~~~-~-~~~~~~~-~~~~l~l~~~   50 (126)
T 1ecs_A            5 ATPNLPSRDFDSTAAFYERLGFGIVFRD-A-GWMILQR-GDLMLEFFAH   50 (126)
T ss_dssp             EEEEEEESCHHHHHHHHHTTTCEEEEEC-S-SEEEEEE-TTEEEEEEEC
T ss_pred             EEEEEEeCCHHHHHHHHHHCCCEEEecC-C-CEEEEEe-CCEEEEEEeC
Confidence            6799999999999999988999886542 2 2333332 3556666543

>3iuz_A Putative glyoxalase superfamily protein; struct genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: MLY P6G PGE; 1.90A {Ralstonia eutropha}

Probab=83.07  E-value=5.1  Score=28.88  Aligned_cols=46  Identities=17%  Similarity=-0.004  Sum_probs=34.8

Q ss_pred             CCCccEEEEEeCCHHHHHHHHHHCCCeEec----cCC----------CceEEEEECCCCC
Q 032146           92 GGRDRHTCIAIRDVSKLKMILDKAGISYTL----SKS----------GRPAIFTRDPDAN  137 (146)
Q Consensus        92 ~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~----~~~----------g~~~~~~~DpdG~  137 (146)
                      |..++|+..+|.|++++.+.|+++|+++..    ++.          ....+.|.|.+|.
T Consensus       233 G~~iNHlT~rv~DId~v~~~m~~~G~~~k~~IeGsP~~lLrQTSf~A~~e~v~F~d~~G~  292 (340)
T 3iuz_A          233 GNAFNHATDRVDDVFGLSEQQXALGRPMXDXVEVSGSGRVXQTAFRADTVRRQFIGAQGE  292 (340)
T ss_dssp             TTSCSEEEEECSCHHHHHHHHHHTTCCBCSCCEECTTSSEEEEEBCCCEEEEEEECTTSC
T ss_pred             CCccccccCCcCCHHHHHHHHHHcCCChhhhhcCCcccceeeeeccccceEEEEecCCCc
Confidence            345689999999999999999999999742    222          2344677887764

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=82.06  E-value=2.9  Score=25.64  Aligned_cols=57  Identities=16%  Similarity=0.191  Sum_probs=37.3

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeCCCC
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPD   83 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~   83 (146)
                      +..|+.+.|.|++++.+-..+ .|.++.........+ +.+++.- .|..++|++.....
T Consensus        65 ~~~hl~f~V~d~d~~~~~l~~-~G~~v~~~p~~~~~G-~~~~~~DPdG~~iel~~~~~~~  122 (144)
T 3r6a_A           65 RNTQATFLVDSLDKFKTFLEE-NGAEIIRGPSKVPTG-RNMTVRHSDGSVIEYVEHSKIE  122 (144)
T ss_dssp             GGCCEEEEESCHHHHHHHHHH-TTCEEEEEEEEETTE-EEEEEECTTSCEEEEEEECC--
T ss_pred             cceEEEEEeCCHHHHHHHHHH-cCCEEecCCccCCCc-eEEEEECCCCCEEEEEEcCCcc
Confidence            357899999999999998876 788876432111122 3444443 56689998876543

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=80.53  E-value=2.7  Score=25.22  Aligned_cols=55  Identities=7%  Similarity=-0.036  Sum_probs=34.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP   80 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~   80 (146)
                      .+..|+.+.|.|++++.+-..+  |.++.........+.+.+++.- .+..+++....
T Consensus        73 ~~~~~~~~~v~dv~~~~~~l~~--G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           73 RRNMLLYFEHADVDAAFQDIAP--HVELIHPLERQAWGQRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             CSSCEEEEEESCHHHHHC-CGG--GSCEEEEEEECTTSCEEEEEECTTCCEEEEEECC
T ss_pred             CCceEEEEEeCcHHHHHHHHHc--CCccccCCccCCCCCEEEEEECCCCCEEEEEecc
Confidence            4678999999999999888877  8876532111112224444544 45677777654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	146
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	3e-14
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	5e-14
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	3e-12
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	8e-12
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	7e-11
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	3e-10
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	3e-10
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	3e-10
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	2e-09
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	2e-09
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	3e-09
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	1e-08
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	3e-08
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	1e-07
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	1e-07
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	2e-07
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	3e-07
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	4e-07
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	4e-07
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	9e-07
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	1e-06
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	1e-06
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	5e-06
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	2e-05
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	3e-05
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	3e-05
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	4e-05
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	5e-05
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	9e-05
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	5e-04
d1sqda2	230	d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxy	0.002

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 63.5 bits (153), Expect = 3e-14
 Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 7/133 (5%)

Query: 21  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV---GAEMIHLM 77
           Y +   HH+ ++ +N   +  FY+N+LGL   +   +   P      +    G+    L 
Sbjct: 2   YEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELS 61

Query: 78  ELPNPDPLSGRPEHGGRDR--HTCIAIRDVSKLKMILDKAGISYT--LSKSGRPAIFTRD 133
               P             R      +   +   K   +K  + ++   + + RPA+   D
Sbjct: 62  FFEIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFED 121

Query: 134 PDANALEFTQVDG 146
            +   L     +G
Sbjct: 122 AEGLRLVLLVSNG 134

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 62.8 bits (151), Expect = 5e-14
 Identities = 26/118 (22%), Positives = 44/118 (37%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 85
           + H  I   +L+RS++FY   LG+++       +  Y   +L  G EM   +     +  
Sbjct: 4   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 63

Query: 86  SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ 143
               +H     H  I + DV +L   + K  +            F  DPD   +E   
Sbjct: 64  VTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLN 121

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 58.1 bits (139), Expect = 3e-12
 Identities = 22/122 (18%), Positives = 49/122 (40%), Gaps = 5/122 (4%)

Query: 27  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 86
            H  +   +L+RS++FY  +LG+++     + +  Y  A++  G E    +     +   
Sbjct: 4   LHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV 63

Query: 87  GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDANALEF 141
            + E G    H  +++ + ++    + + G + T              F  DPD   +E 
Sbjct: 64  DKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIEL 123

Query: 142 TQ 143
            +
Sbjct: 124 IE 125

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 56.5 bits (135), Expect = 8e-12
 Identities = 16/122 (13%), Positives = 34/122 (27%), Gaps = 11/122 (9%)

Query: 25  SVHHVGILCENLERSLEFYQNILGLEINEARPH-DKLPYRGAWLWVGAEMIHLMELPNPD 83
            + H+  +  +LER     + +       A         R  +  +G   + +M+     
Sbjct: 4   GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLA 63

Query: 84  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANAL 139
                           I   D  +    + K G+     +        +I+  D D +  
Sbjct: 64  E------RSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMF 117

Query: 140 EF 141
           E 
Sbjct: 118 EL 119

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 54.5 bits (130), Expect = 7e-11
 Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 11/118 (9%)

Query: 25  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 84
            ++H+ +   +L  S+ FY+++LG  +           +GA+L +G+  + L   P    
Sbjct: 4   GLNHLTLAVADLPASIAFYRDLLGFRLEAR------WDQGAYLELGSLWLCLSREPQYGG 57

Query: 85  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANALEF 141
               P          IA  D ++    L   G+     ++S   + +  DPD + LE 
Sbjct: 58  ----PAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEA 111

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (127), Expect = 3e-10
 Identities = 21/144 (14%), Positives = 46/144 (31%), Gaps = 27/144 (18%)

Query: 27  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-------------- 72
               +  ++ ++SL+FY  +LG+ + +      + +   +L    +              
Sbjct: 25  QQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWA 84

Query: 73  -----MIHLMELPNPDPLSGRPEHGGRD-----RHTCIAIRDVSKLKMILDKAGISYT-- 120
                 + L      +    +  H G        H  IA+ DV       ++ G+ +   
Sbjct: 85  LSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKK 144

Query: 121 -LSKSGRPAIFTRDPDANALEFTQ 143
                 +   F +DPD   +E   
Sbjct: 145 PDDGKMKGLAFIQDPDGYWIEILN 168

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 53.4 bits (127), Expect = 3e-10
 Identities = 13/120 (10%), Positives = 32/120 (26%)

Query: 22  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 81
             V   H  +  + L  + + +  +LG  + E    +       +L +  +   +  + +
Sbjct: 2   AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHH 61

Query: 82  PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF 141
           P+           +    +                       +    I+  DP  N  E 
Sbjct: 62  PEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEV 121

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 52.7 bits (125), Expect = 3e-10
 Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 8/118 (6%)

Query: 25  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 84
           S++H+ +   +L++S+ F+  +LGL ++           G      +       +P    
Sbjct: 4   SLNHLTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLSYDEARQYVP---- 59

Query: 85  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEF 141
                E         +A  D   L   L++AG++     KS   + +  DPD + LE 
Sbjct: 60  ---PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLEL 114

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 51.3 bits (122), Expect = 2e-09
 Identities = 12/127 (9%), Positives = 31/127 (24%), Gaps = 9/127 (7%)

Query: 20  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 79
            + +  +  V +    L++       I G          +      +  +  E    + +
Sbjct: 7   KHQIQGMGSVELTVRRLDKMASTLTEIFGY-----TEVSRNDQEAIFQSIKGEAFGEIVV 61

Query: 80  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS----GRPAIFTRDPD 135
              D  + +P  G           D              +  S         +++ R+ +
Sbjct: 62  KYLDGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESN 121

Query: 136 ANALEFT 142
               E  
Sbjct: 122 GILFEIA 128

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 51.0 bits (121), Expect = 2e-09
 Identities = 19/120 (15%), Positives = 37/120 (30%), Gaps = 2/120 (1%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
           +V + H   +  ++ R   + +  LG  ++E           AW+     +         
Sbjct: 3   LVRLDHFNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN 61

Query: 83  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR-PAIFTRDPDANALEF 141
            P          ++H  I I D      I D+               ++  DPD + +E 
Sbjct: 62  GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEI 121

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 49.6 bits (117), Expect = 3e-09
 Identities = 12/116 (10%), Positives = 28/116 (24%), Gaps = 9/116 (7%)

Query: 31  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 90
           +   ++  ++EF+ + LG                A +      + +  + +         
Sbjct: 10  LTARDVAEAVEFWTDRLGFSRVFVEDDF------AGVVRDDVTLFISAVQDQVVPDNTQA 63

Query: 91  HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP---AIFTRDPDANALEFTQ 143
                    +       +      A          +P       RDP  N + F  
Sbjct: 64  WVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA 119

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 48.2 bits (113), Expect = 1e-08
 Identities = 15/118 (12%), Positives = 32/118 (27%), Gaps = 10/118 (8%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 85
           + H+ +   ++  + EF +   GL  +  R +     R    ++   M            
Sbjct: 4   IKHLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRDNDGFILTLMKGKEV------- 56

Query: 86  SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-AIFTRDPDANALEFT 142
             +            +   V K+   L + G      K       +   P    +E  
Sbjct: 57  --QYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVM 112

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 47.1 bits (111), Expect = 3e-08
 Identities = 17/124 (13%), Positives = 43/124 (34%), Gaps = 15/124 (12%)

Query: 25  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 84
           +++ + I+  N+ +     ++IL  + + A           +      ++       P  
Sbjct: 2   NLNQLDIIVSNVPQVCADLEHILDKKADYANDG-----FAQFTIGSHCLMLSQNHLVP-- 54

Query: 85  LSGRPEHGGRDRHTCIAIRDV----SKLKMILDKAGISYTLSKSGRPAIFTRDPDANALE 140
                E+        I + DV     +L  +  K     T++  G  ++  + P    L+
Sbjct: 55  ----LENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLD 110

Query: 141 FTQV 144
           F ++
Sbjct: 111 FYRM 114

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 46.1 bits (108), Expect = 1e-07
 Identities = 19/138 (13%), Positives = 39/138 (28%), Gaps = 17/138 (12%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE---------- 72
            + + HV   C + + + ++YQ   G        + +       +   A+          
Sbjct: 5   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 64

Query: 73  MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT-----LSKSGRP 127
           M  L +         +        H    + D+  +   L + G+        L   G  
Sbjct: 65  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 124

Query: 128 AIF--TRDPDANALEFTQ 143
             F   +      +E TQ
Sbjct: 125 INFMHPKSGKGVLIELTQ 142

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 45.7 bits (107), Expect = 1e-07
 Identities = 17/125 (13%), Positives = 30/125 (24%), Gaps = 9/125 (7%)

Query: 28  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 87
            +      L+  + FY+  L L+                +  G                 
Sbjct: 12  RIARPTGQLDEIIRFYEEGLCLKRIG---EFSQHNGYDGVMFGLPHADYHLEFTQYEGGS 68

Query: 88  RPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYTLSKS---GRPAIFTRDPDANALEF 141
                  D      + +  +L  I   L   G     S++       +   DPD   + F
Sbjct: 69  TAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVF 128

Query: 142 TQVDG 146
               G
Sbjct: 129 MNSKG 133

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 45.4 bits (106), Expect = 2e-07
 Identities = 15/140 (10%), Positives = 40/140 (28%), Gaps = 19/140 (13%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPH---------------DKLPYRGAWL 67
           ++ + +V I+ E+L+ ++ F++ I       A                  +         
Sbjct: 7   LLRMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG 66

Query: 68  WVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY----TLSK 123
               E+   +  P        P +          + D+ ++   L K G          +
Sbjct: 67  HSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYE 126

Query: 124 SGRPAIFTRDPDANALEFTQ 143
           +     + R  +   +   +
Sbjct: 127 NSYRLCYIRGVEGILIGLAE 146

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 44.7 bits (104), Expect = 3e-07
 Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 7/124 (5%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 85
           +    ++ E++ +S+EFY+  +G+EI                 +      +  + + DP 
Sbjct: 3   ISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 61

Query: 86  SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK------SGRPAIFTRDPDANAL 139
              P  G R           S  K   +     Y           G+     +DPD N +
Sbjct: 62  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVV 121

Query: 140 EFTQ 143
           +   
Sbjct: 122 DLFA 125

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 44.6 bits (104), Expect = 4e-07
 Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 14/125 (11%)

Query: 22  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 81
           GV+   HV +   ++ ++LE Y  +LGL        D+      +L    E+     +  
Sbjct: 4   GVMRPGHVQLRVLDMSKALEHYVELLGLI-----EMDRDDQGRVYLKAWTEVDKFSLVLR 58

Query: 82  PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDA 136
                G    G +        +    L       G +     +G        +  + P  
Sbjct: 59  EADEPGMDFMGFKVVDEDALRQLERDLM----AYGCAVEQLPAGELNSCGRRVRFQAPSG 114

Query: 137 NALEF 141
           +  E 
Sbjct: 115 HHFEL 119

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (104), Expect = 4e-07
 Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 5/101 (4%)

Query: 22  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 81
             +  H V     N +++  FY N +G E    +  +          +    I  +    
Sbjct: 8   RFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSA 67

Query: 82  PDPLSG-----RPEHGGRDRHTCIAIRDVSKLKMILDKAGI 117
            +P +        +HG   +     + D   +     + G 
Sbjct: 68  LNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGA 108

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 43.4 bits (101), Expect = 9e-07
 Identities = 18/126 (14%), Positives = 36/126 (28%), Gaps = 19/126 (15%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
           + S+ ++G    ++     F    LGL       +      G    + +    +      
Sbjct: 2   IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN------GDLFRIDSRAWRIAVQQGE 55

Query: 83  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 135
                     G   +       ++++   L +AGI+ T   +           I   DP 
Sbjct: 56  VD---DLAFAG---YEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPF 109

Query: 136 ANALEF 141
              LE 
Sbjct: 110 GLPLEI 115

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 43.9 bits (103), Expect = 1e-06
 Identities = 14/112 (12%), Positives = 29/112 (25%), Gaps = 13/112 (11%)

Query: 19  IDYGVVSVHHVGILCENLERSLEFYQNILGLEI-------NEARPHDKLPYRGAWLWVGA 71
            DYG+    H+      L  +  ++    G          +       L           
Sbjct: 3   ADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSEN 62

Query: 72  EMIHLMELPNPDPLSGRPE------HGGRDRHTCIAIRDVSKLKMILDKAGI 117
            ++ L E  +      + +       G   +H  +A  DV +    +     
Sbjct: 63  VLLPLNEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSA 114

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 43.1 bits (100), Expect = 1e-06
 Identities = 19/124 (15%), Positives = 39/124 (31%), Gaps = 15/124 (12%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
           +V   ++ I+  +L +S EFY ++LGL + E   +               ++    +   
Sbjct: 14  IVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDENTIYLRSLEEFIHHNLVLRQGPIAAV 73

Query: 83  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDAN 137
                         +   +  +V   +    + G      K G       ++   DP   
Sbjct: 74  ----------AAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGF 123

Query: 138 ALEF 141
             EF
Sbjct: 124 PYEF 127

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 41.7 bits (97), Expect = 5e-06
 Identities = 13/105 (12%), Positives = 28/105 (26%), Gaps = 8/105 (7%)

Query: 21  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 80
           + V  +  V     N +++  +Y    G+++      +      A   +       +   
Sbjct: 3   FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTS 62

Query: 81  NPDPLSGRP--------EHGGRDRHTCIAIRDVSKLKMILDKAGI 117
              P +           EHG       I + D         + G 
Sbjct: 63  VIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGA 107

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 39.8 bits (92), Expect = 2e-05
 Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 11/124 (8%)

Query: 26  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 85
           + H      +  +++ FY  +LG  +++       P            +H     +   L
Sbjct: 11  IGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAH----FLHCNGRHHTIAL 66

Query: 86  SGRPEHGGRDRHT--CIAIRDVSKLKMILDKAGI-SYTLSKSGRP---AIFTRDPDAN-A 138
           +  P              I DV      LD AG  +  L +       + +   P     
Sbjct: 67  AAFPIPKRIHHFMLQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIE 126

Query: 139 LEFT 142
           +EF 
Sbjct: 127 VEFG 130

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 39.8 bits (92), Expect = 3e-05
 Identities = 8/57 (14%), Positives = 20/57 (35%)

Query: 21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLM 77
          +  ++ HHV + C +   +   +   LG  +             A L + +  +  +
Sbjct: 9  FHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFL 65

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 38.8 bits (89), Expect = 3e-05
 Identities = 13/120 (10%), Positives = 29/120 (24%), Gaps = 7/120 (5%)

Query: 23  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 82
           +  + ++G   +++     F    +GL               A          +   P  
Sbjct: 2   IERLGYLGFAVKDVPAWDHFLTKSVGLM------AAGSAGDAALYRADQRAWRIAVQPGE 55

Query: 83  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGI-SYTLSKSGRPAIFTRDPDANALEF 141
                       D      + D  +   +    G  +    +     +  +DP    LE 
Sbjct: 56  LDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEI 115

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 38.4 bits (88), Expect = 4e-05
 Identities = 17/118 (14%), Positives = 29/118 (24%), Gaps = 16/118 (13%)

Query: 28  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 87
              I      R+  FY +ILG+                      E    +          
Sbjct: 5   VANIATPEPARAQAFYGDILGMP------VAMDHGWIVTHASPLEAHAQVSFAREGG--- 55

Query: 88  RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 141
               G       I + +  ++   + KAG+               +F RDP    +  
Sbjct: 56  ---SGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINI 110

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 38.5 bits (88), Expect = 5e-05
 Identities = 12/115 (10%), Positives = 27/115 (23%), Gaps = 9/115 (7%)

Query: 31  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 90
           +   ++  ++ F+ + LG E +              +  G   +H+    +         
Sbjct: 11  LTAVDVPANVSFWVDTLGFEKDFGDRDFA------GVRRGDIRLHISRTEHQIVADNTSA 64

Query: 91  HGGRDRHTCIAIRDVSKLKMILDKAGISYTL---SKSGRPAIFTRDPDANALEFT 142
                    +       +                          RDP  N + FT
Sbjct: 65  WIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFT 119

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 37.6 bits (86), Expect = 9e-05
 Identities = 15/115 (13%), Positives = 24/115 (20%), Gaps = 3/115 (2%)

Query: 31  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 90
           +   + + +  FY+  LG  I                 +     H    P     S    
Sbjct: 8   LPSRDFDSTAAFYER-LGFGI--VFRDAGWMILQRGDLMLEFFAHPGLDPLASWFSCCLR 64

Query: 91  HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD 145
                           +          +  L   G       DPD   L   Q +
Sbjct: 65  LDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE 119

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.0 bits (82), Expect = 5e-04
 Identities = 9/62 (14%), Positives = 20/62 (32%), Gaps = 1/62 (1%)

Query: 21 YGVVSVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMEL 79
          + V   HH+   C +       +   LG+    ++          ++L    ++  L   
Sbjct: 8  FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTA 67

Query: 80 PN 81
          P 
Sbjct: 68 PY 69

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 230

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.7 bits (79), Expect = 0.002
 Identities = 15/128 (11%), Positives = 35/128 (27%), Gaps = 17/128 (13%)

Query: 12  PIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA------ 65
               S  +DYG+  + H       L  +L +     G         D +    +      
Sbjct: 9   EDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAV 68

Query: 66  -WLWVGAEMIHLMELPNPDPLSGRPEH------GGRDRHTCIAIRD----VSKLKMILDK 114
                   ++ + E  +      + +       G   +H  +   D    + +++     
Sbjct: 69  LASNDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSI 128

Query: 115 AGISYTLS 122
            G  +  S
Sbjct: 129 GGFDFMPS 136

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	146
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.92
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.91
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.91
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.9
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.9
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.9
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.89
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.89
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.89
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.88
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.88
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.88
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.87
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.87
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.87
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.87
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.87
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.86
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.86
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.85
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.84
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.84
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.83
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.82
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.82
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.81
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.8
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.79
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.76
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.76
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.69
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.42
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.41
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.35
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.34
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.32
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.24
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	99.13
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.78
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	97.73
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	96.12
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	95.91
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	95.68
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	95.1
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	94.25
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	94.17
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	93.74
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	92.81
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	92.66
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	92.61
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	92.39
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	91.69
d1k4na_	190	Hypothetical protein YecM (EC4020) {Escherichia co	90.47
d2g3aa1	137	Probable acetyltransferase Atu2258 {Agrobacterium	89.61
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	89.21
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	88.74
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	85.68
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	85.46
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	85.19
d1y9wa1	140	Probable acetyltransferase BC2806 {Bacillus cereus	84.77
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	84.7
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	83.81
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	82.25
d2f06a1	71	Hypothetical protein BT0572 {Bacteroides thetaiota	82.01
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	81.87
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	81.66
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	81.57
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	81.57
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	81.45

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.92  E-value=2.6e-24  Score=132.37  Aligned_cols=111  Identities=16%  Similarity=0.207  Sum_probs=89.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  103 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~  103 (146)
                      ++|+|+.|.|+|++++++||+++||+++....+      ..+++..++..+.|.......    ....+. ..+++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~------~~~~~~~g~~~l~l~~~~~~~----~~~~~~-~~~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSHCLMLSQNHLVP----LENFQS-GIIIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTEEEEEESSCSSS----CCCCCS-CEEEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC------CeEEEEEcCceeeeeecccCC----CCCCCc-ceEEEEEEC
Confidence            368999999999999999999999999877544      346788899888887643321    112222 368999999


Q ss_pred             CHHHHHHHHHHCCCeEecc----CCCceEEEEECCCCCeEEEEeec
Q 032146          104 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       104 d~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      |+++++++|+++|+++..+    ++|.+.++++|||||.|||++.+
T Consensus        70 D~d~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~DPdGn~ie~~~~k  115 (115)
T d2i7ra1          70 DVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK  115 (115)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEECC
T ss_pred             CHHHHHHHHHhhccccccceEEeeCCeEEEEEECCCCCEEEEEEeC
Confidence            9999999999999987653    35778999999999999999864

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.91  E-value=1.4e-23  Score=131.38  Aligned_cols=116  Identities=15%  Similarity=0.233  Sum_probs=90.6

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCC-CCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      |+.+|+|++|.|+|++++++||+++|||++........ ......++..++..+++........        .+..|++|
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~f   72 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLAE--------RSYNHIAF   72 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCCSS--------CCSCEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCCEEEeecccccccc--------cceeeeee
Confidence            57899999999999999999999999999886544332 2345677778888777766433221        23588999


Q ss_pred             EeC--CHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeec
Q 032146          101 AIR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       101 ~v~--d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      .++  |+++++++|+++|+++..++    ++++.+|++|||||+|||.+.+
T Consensus        73 ~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          73 KIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             cccHHHHHHHHHHHHHCCCeEecCCcccCCCEEEEEEECCCCCEEEEEECC
Confidence            886  89999999999999986532    4678999999999999998753

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.91  E-value=3.6e-23  Score=131.11  Aligned_cols=114  Identities=24%  Similarity=0.375  Sum_probs=90.6

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEE
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  101 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~  101 (146)
                      |+++|+||+|.|+|++++++||+++||+++.....      ...++..++..+.+........   .+.......|++|.
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~h~~~~   71 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQY---VPPQESDYTHYAFT   71 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETTEEEEEEECTTCCC---CCGGGSCSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec------cccccccccccceeeccccccc---CCCcCCccceeeee
Confidence            57899999999999999999999999999987654      3456777777766665544332   22223445888998


Q ss_pred             eC--CHHHHHHHHHHCCCeEecc-CCCceEEEEECCCCCeEEEEee
Q 032146          102 IR--DVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       102 v~--d~~~~~~~l~~~G~~~~~~-~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++  |+++++++|+++|+++... ..+++.+|++|||||.|||.+.
T Consensus        72 ~~~~d~~~~~~~l~~~Gv~~~~~~~~~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          72 VAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEEC
T ss_pred             chHHHHHHHHHHHHHCCCeEeecCCCCceEEEEECCCCCEEEEEEC
Confidence            85  8999999999999998654 4678999999999999999764

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.90  E-value=6.7e-23  Score=130.75  Aligned_cols=123  Identities=14%  Similarity=0.230  Sum_probs=91.5

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCC-----------CCCCceEEEEEeC--CeEEEEEeeCCCCCCC-
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH-----------DKLPYRGAWLWVG--AEMIHLMELPNPDPLS-   86 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~-----------~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~-   86 (146)
                      ..+.+|+|++|.|+|++++++||++ |||++..+...           .......+++...  ...++|+......... 
T Consensus         5 ~~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~   83 (149)
T d1ss4a_           5 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIAD   83 (149)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCB
T ss_pred             CCCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCccc
Confidence            3578999999999999999999998 99998765321           1223345556553  3467776544332221 


Q ss_pred             --CCCCCCCCccEEEEEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEee
Q 032146           87 --GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        87 --~~~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                        ..+....+..|++|.|+|+++++++|+++|+++..++    .+.+.+|++|||||.|||+|.
T Consensus        84 ~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          84 HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEE
T ss_pred             ccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeEEEEEECCCCCEEEEEEc
Confidence              1223345678999999999999999999999986443    567889999999999999986

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.90  E-value=1.4e-22  Score=127.51  Aligned_cols=111  Identities=22%  Similarity=0.358  Sum_probs=88.4

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEE
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  101 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~  101 (146)
                      |+.+|+||+|.|+|++++++||+++||+++..+.+      ...++..++..+...........      ..+..|++|.
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~h~~~~   68 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQYGGP------AADYTHYAFG   68 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETTEEEEEEECTTCCCC------CSSSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEecc------ceeeeecCCeEEEEeeecccccc------ccccccchhc
Confidence            57899999999999999999999999999987655      34667778877776655443221      1234667766


Q ss_pred             e--CCHHHHHHHHHHCCCeEeccC-CCceEEEEECCCCCeEEEEee
Q 032146          102 I--RDVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       102 v--~d~~~~~~~l~~~G~~~~~~~-~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +  +|+++++++|+++|+++...+ ++.+.+|++|||||.|||...
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          69 IAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEESC
T ss_pred             cccchHHHHHHHHHHCCCcCccCCCcceeEEEEECCCCCEEEEEEC
Confidence            6  499999999999999987654 567889999999999999764

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.90  E-value=7.9e-23  Score=130.04  Aligned_cols=123  Identities=16%  Similarity=0.232  Sum_probs=86.1

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCC-CceEEEEEeC----CeEEEEEeeCCCCCCCCCCCCCCCc
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL-PYRGAWLWVG----AEMIHLMELPNPDPLSGRPEHGGRD   95 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~-~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~   95 (146)
                      ..|.+|+||+|.|+|++++++||+++||+++..+...... .....++...    ...+.+...+....   .....++.
T Consensus         2 ~~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~   78 (144)
T d1zswa1           2 YEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGR---TYRGTNAI   78 (144)
T ss_dssp             SCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCB---CBCCBSEE
T ss_pred             CcccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccC---CccCCCce
Confidence            4689999999999999999999999999998865432221 1111122221    12343333322211   11222446


Q ss_pred             cEEEEEeCC---HHHHHHHHHHCCCeEecc--CCCceEEEEECCCCCeEEEEeecC
Q 032146           96 RHTCIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVDG  146 (146)
Q Consensus        96 ~hl~~~v~d---~~~~~~~l~~~G~~~~~~--~~g~~~~~~~DpdG~~ie~~~~~~  146 (146)
                      .|+||.|+|   ++++.++|+++|+.+..+  ..+.+++||+|||||.|||++.++
T Consensus        79 ~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~~~~~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          79 TRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECTT
T ss_pred             eEEEEecCCchhHHHHhhhhhccceeeeCccccCCeEEEEEECCCCCEEEEEEeCC
Confidence            899999997   777899999999988543  357899999999999999998753

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.89  E-value=3.3e-23  Score=131.48  Aligned_cols=125  Identities=14%  Similarity=0.226  Sum_probs=93.2

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEE------eCCeEEEEEeeCCCCCCCC----CCC
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW------VGAEMIHLMELPNPDPLSG----RPE   90 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~~~~~~~~----~~~   90 (146)
                      -++.+|+||+|.|+|+++|++||+++||++..............++..      .+...++++..........    ...
T Consensus         3 ~m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~   82 (145)
T d1jc4a_           3 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   82 (145)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccC
Confidence            358999999999999999999999999999876555444443333332      2566888887665443221    122


Q ss_pred             CCCCccEEEEEeCCHHHHHHHHHHCCCeEeccC-----CCceEEEE--ECCCCCeEEEEeec
Q 032146           91 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK-----SGRPAIFT--RDPDANALEFTQVD  145 (146)
Q Consensus        91 ~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~--~DpdG~~ie~~~~~  145 (146)
                      ...+..|+||.|+|+++.+++|+++|+++..++     .|.+.+|+  +||+|++|||+|.+
T Consensus        83 ~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          83 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            345679999999999999999999999985432     33445555  68999999999986

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.89  E-value=2.9e-23  Score=135.84  Aligned_cols=119  Identities=13%  Similarity=0.193  Sum_probs=85.0

Q ss_pred             CCCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe---EEEEEeeCCCCCCCCCCCCCCC
Q 032146           18 KIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE---MIHLMELPNPDPLSGRPEHGGR   94 (146)
Q Consensus        18 ~~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~   94 (146)
                      +....|++|+||+|.|+|++++++||+++|||++..+.+.     ...+...++.   .+.+.......   ..+ ..++
T Consensus         5 p~~~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~   75 (170)
T d1zswa2           5 PAKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ-----EAIFQSIKGEAFGEIVVKYLDGPT---EKP-GRGS   75 (170)
T ss_dssp             CGGGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSS-----EEEEESSTTCSTTCEEEEECCSSB---CBC-CBTC
T ss_pred             ChhHHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecCc-----eEEEEeccCccceEEEeccccccc---ccc-Cccc
Confidence            3445689999999999999999999999999999886441     2233333222   22222211111   122 2245


Q ss_pred             ccEEEEEeCC---HHHHHHHHHHCCCeEecc--CCCceEEEEECCCCCeEEEEeec
Q 032146           95 DRHTCIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        95 ~~hl~~~v~d---~~~~~~~l~~~G~~~~~~--~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      ++|+||.|+|   ++++++++++.|+++...  +...+++||+|||||.|||+...
T Consensus        76 l~HiAf~V~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~s~Yf~DPdG~~iEl~t~~  131 (170)
T d1zswa2          76 IHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATDG  131 (170)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEEE
T ss_pred             cceEEEEeCChHHHHHHHHHHHhcCCCccccccCCCEEEEEEECCCCcEEEEEECC
Confidence            6899999985   778899999999998643  35678899999999999998753

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.89  E-value=9.2e-23  Score=124.57  Aligned_cols=107  Identities=16%  Similarity=0.229  Sum_probs=80.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeC-CeEEEEEeeCCCCCCCCCCCCCCCccEEEEEe
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  102 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v  102 (146)
                      ++|+||+|.|+|++++++||+++|||++..+...     ..+++..+ +..+.+........        .+..|++|.|
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--------~~~~h~~f~v   68 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN-----AFAVMRDNDGFILTLMKGKEVQY--------PKTFHVGFPQ   68 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT-----TEEEEECTTCCEEEEEECSSCCC--------CTTCCEEEEC
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC-----cceeeeecceeeeeeeeeecccc--------cccceeeeee
Confidence            4789999999999999999999999999876542     22333333 34666655432221        3458999999


Q ss_pred             CC---HHHHHHHHHHCCCeEeccC-CCceEEEEECCCCCeEEEEe
Q 032146          103 RD---VSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       103 ~d---~~~~~~~l~~~G~~~~~~~-~g~~~~~~~DpdG~~ie~~~  143 (146)
                      +|   ++++++++++.|+++...+ .+.+.+|++|||||.||+.+
T Consensus        69 ~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iEi~c  113 (113)
T d1xqaa_          69 ESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVMC  113 (113)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCCCEEC-CEEEEEEETTTEEEEEEC
T ss_pred             ccccchhhhhhhHHHcCCccccCCCCceEEEEEECCCCCEEEEEC
Confidence            86   6778999999999976544 56789999999999999964

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=1.3e-22  Score=126.94  Aligned_cols=121  Identities=20%  Similarity=0.319  Sum_probs=83.2

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe-EEEEEeeCCCCCCCCCCCCCCCccEEEEEe
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAI  102 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v  102 (146)
                      ++|.|++|.|+|+++|++||+++|||++..................... ............ ........+..|+++.+
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   79 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG-VDKYELGTAYGHIALSV   79 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETT-CCCCCCCSSEEEEEEEC
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccc-cccccccccceeeccch
Confidence            3688999999999999999999999999875543333333333333211 111111111111 11223334568999999


Q ss_pred             CCHHHHHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEeec
Q 032146          103 RDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       103 ~d~~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      ++++++.+++++.|..+...+     .+.+.+|++|||||+|||+|++
T Consensus        80 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~  127 (135)
T d1f9za_          80 DNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  127 (135)
T ss_dssp             SCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-
T ss_pred             HHHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECC
Confidence            999999999999998875432     4577889999999999999976

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.88  E-value=3.1e-22  Score=125.65  Aligned_cols=106  Identities=17%  Similarity=0.154  Sum_probs=83.9

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe--EEEEEeeCCCCCCCCCCCCCCCccEEE
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTC   99 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hl~   99 (146)
                      .|++|+||+|.|+|++++++||+++|||++..+.+      ..++++.++.  .+.+...  ..         .+..|++
T Consensus         1 ~I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~l~~~--~~---------~~~~h~~   63 (131)
T d1lgta1           1 SIRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAVQQG--EV---------DDLAFAG   63 (131)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEEC--TT---------CEEEEEE
T ss_pred             CcccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCCceEEEEecC--CC---------CCceEEE
Confidence            37899999999999999999999999999987644      4577777654  3433321  11         2468999


Q ss_pred             EEeC---CHHHHHHHHHHCCCeEeccC-------CCceEEEEECCCCCeEEEEee
Q 032146          100 IAIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       100 ~~v~---d~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      |.+.   +++++.++|+++|+++...+       .+.+.+|++|||||+||++..
T Consensus        64 f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~  118 (131)
T d1lgta1          64 YEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYG  118 (131)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             EEEccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeC
Confidence            9996   57788999999999987543       456789999999999999753

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.88  E-value=3e-22  Score=129.97  Aligned_cols=116  Identities=15%  Similarity=0.245  Sum_probs=83.7

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           21 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        21 ~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      |...+++||+|.|+|++++++||+++|||++..+...........++..+.............        ..+..|+++
T Consensus         1 m~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~h~~~   72 (162)
T d1mpya2           1 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHPE--------KGRLHHVSF   72 (162)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECSS--------SSEEEEEEE
T ss_pred             CCcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccccccccccccCC--------CCccceeEE
Confidence            456789999999999999999999999999987655444444445544443321111111111        134689999


Q ss_pred             EeCCHH---HHHHHHHHCCCeEeccC-----CCceEEEEECCCCCeEEEEee
Q 032146          101 AIRDVS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       101 ~v~d~~---~~~~~l~~~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      .+.+++   +++++|++.|+++..++     .+.+++|++|||||+|||++.
T Consensus        73 ~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~  124 (162)
T d1mpya2          73 HLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCG  124 (162)
T ss_dssp             ECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEEC
T ss_pred             EEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEEC
Confidence            998655   67899999999886432     346889999999999999864

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.87  E-value=3.9e-22  Score=125.96  Aligned_cols=120  Identities=16%  Similarity=0.139  Sum_probs=84.4

Q ss_pred             eeeeeeEEEE----eCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEE
Q 032146           23 VVSVHHVGIL----CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   98 (146)
Q Consensus        23 ~~~l~hv~l~----v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl   98 (146)
                      +.+|.|+.++    |+|++++++||+++|||++..+.... .....+++..++..+++.........  .+.......|+
T Consensus         3 ~~~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~hl   79 (137)
T d1twua_           3 FSSFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQH-NGYDGVMFGLPHADYHLEFTQYEGGS--TAPVPHPDSLL   79 (137)
T ss_dssp             CSSCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEE-TTEEEEEEESSSSSEEEEEEEETTCC--CCCCCCTTCEE
T ss_pred             cCCCceEEEEEecccCCHHHHHHHHHhccCCceeeeeccc-cceeEEEecCCCCceeeecccccccc--cccccccCceE
Confidence            4455555555    58999999999999999997654322 23355667666554444332222211  12233445899


Q ss_pred             EEEeCC---HHHHHHHHHHCCCeEeccC---CCceEEEEECCCCCeEEEEeec
Q 032146           99 CIAIRD---VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        99 ~~~v~d---~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      +|.|++   +++++++|++.|+++..++   ++.+.+||.|||||+|||.+..
T Consensus        80 af~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPDG~~Iel~~~~  132 (137)
T d1twua_          80 VFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSK  132 (137)
T ss_dssp             EEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSC
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCeEeCCCCCCCCceEEEEECCCCCEEEEEcCC
Confidence            999985   7888999999999987654   3678899999999999999765

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.2e-21  Score=127.11  Aligned_cols=124  Identities=16%  Similarity=0.220  Sum_probs=86.9

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCC-------------------eEEEEEeeCCC
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-------------------EMIHLMELPNP   82 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~l~~~~~~   82 (146)
                      ..-+++|++|.|+|+++|++||+++|||++.............++...+.                   ....+......
T Consensus        20 ~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (176)
T d1qipa_          20 KDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGT   99 (176)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTG
T ss_pred             cceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeecc
Confidence            34579999999999999999999999999876554444443444443321                   12222222211


Q ss_pred             --CCCC---CCCCCCCCccEEEEEeCCHHHHHHHHHHCCCeEeccC---CCceEEEEECCCCCeEEEEeec
Q 032146           83 --DPLS---GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        83 --~~~~---~~~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                        ....   .......+..|+++.++|+++++++|+++|+++..++   .+.+.+|++|||||+|||+|++
T Consensus       100 ~~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~~~f~~DPdG~~IElvq~~  170 (176)
T d1qipa_         100 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  170 (176)
T ss_dssp             GGCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             ccccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceEEEEEECCCCCEEEEEeCC
Confidence              1111   1112234678999999999999999999999998754   3456689999999999999975

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.87  E-value=5.4e-22  Score=124.38  Aligned_cols=118  Identities=21%  Similarity=0.275  Sum_probs=85.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe---EEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE---MIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      .+|.|++|.|+|++++++||+++|||++.....................   ...........   ..........++++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   78 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGV---TSYKHDEAYGHIAI   78 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTC---CCCCCCSSEEEEEE
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCc---ccccCCCccceeee
Confidence            5799999999999999999999999999876543333222232222211   11111111111   11222344578999


Q ss_pred             EeCCHHHHHHHHHHCCCeEeccCCCceEEEEECCCCCeEEEEee
Q 032146          101 AIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       101 ~v~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      .++++.+.++++...++++...+.+.+.+|++|||||+|||++.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~iEl~~~  122 (139)
T d2c21a1          79 GVEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLNE  122 (139)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEECSSSSEEEEECTTSCEEEEEEH
T ss_pred             ehhhHHHHHHHHHHcCCceeeCCCCcEEEEEECCCCCEEEEEEC
Confidence            99999999999999999998888899999999999999999985

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.87  E-value=8.6e-22  Score=123.74  Aligned_cols=107  Identities=13%  Similarity=0.140  Sum_probs=83.7

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEe
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  102 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v  102 (146)
                      |++|+||+|.|+|++++++||+++|||++..+..      ..+|++.++....+.......         .+..|++|.|
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~~~~~~~---------~~~~h~~f~v   66 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIAVQPGEL---------DDLAYAGLEV   66 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECTT---------CEEEEEEEEC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeecceeeeeeccCC---------CCceEEEEEe
Confidence            6899999999999999999999999999987644      357788776532222222111         2468999999


Q ss_pred             C---CHHHHHHHHHHCCCeEeccC-------CCceEEEEECCCCCeEEEEee
Q 032146          103 R---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       103 ~---d~~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +   |++++.++++++|+++...+       .....+|++|||||+|||+..
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~  118 (132)
T d1kw3b1          67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG  118 (132)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             ccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEEC
Confidence            6   67889999999999987543       245789999999999999854

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.87  E-value=1.6e-21  Score=118.45  Aligned_cols=106  Identities=18%  Similarity=0.208  Sum_probs=78.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  103 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~  103 (146)
                      +++ +.+|.|+|++++++||+++||+++....+      ....+..++....+.........      +....|++|.++
T Consensus         2 ~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~   68 (111)
T d2pjsa1           2 RRV-VANIATPEPARAQAFYGDILGMPVAMDHG------WIVTHASPLEAHAQVSFAREGGS------GTDVPDLSIEVD   68 (111)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS------SEEEEEEEEEEEEEEEEESSSBT------TBCCCSEEEEES
T ss_pred             eEE-EEEEEeCCHHHHHHHHHHhhCCceeeccc------ceeEeccccccceeeecccccCC------CCceeEEEEEec
Confidence            445 47899999999999999999999987644      22334343333333333222211      123478999999


Q ss_pred             CHHHHHHHHHHCCCeEecc----CCCceEEEEECCCCCeEEEE
Q 032146          104 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  142 (146)
Q Consensus       104 d~~~~~~~l~~~G~~~~~~----~~g~~~~~~~DpdG~~ie~~  142 (146)
                      |+++++++++++|+++..+    ++|.+.+|++|||||+|||+
T Consensus        69 dvd~~~~~l~~~g~~~~~~p~~~~~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          69 NFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             CHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             CHHHHHHHHHhhccccccCCeEcCCCcEEEEEECCCCCEEEeC
Confidence            9999999999999987543    36789999999999999985

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.86  E-value=3e-21  Score=120.34  Aligned_cols=118  Identities=19%  Similarity=0.257  Sum_probs=82.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeCCC--CCCCCCCCCCCCccEEEE
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP--DPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~--~~~~~~~~~~~~~~hl~~  100 (146)
                      .+|+|++|.|+|++++++||++ ||+.+.......    ..+.+.. ++..+.+......  ......+...++..|++|
T Consensus         1 ~ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   75 (128)
T d1klla_           1 ARISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSA----PHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAF   75 (128)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGC----SEEEEECGGGCEEEEEEHHHHHHHCTTCCCCCSSCSCEEEE
T ss_pred             CeEeEEEEEcCCHHHHHHHHHH-hCCccccccccc----cceeeeccceeeeeecccccccccCCCCCCCccccceeEee
Confidence            3689999999999999999977 888876654422    2233444 3445555432211  011112222334479999


Q ss_pred             EeCC---HHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeecC
Q 032146          101 AIRD---VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVDG  146 (146)
Q Consensus       101 ~v~d---~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~~  146 (146)
                      .|++   +++++++|+++|+++..++    +|.+.+|++|||||+|||+++-|
T Consensus        76 ~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~~~~~~~DPdG~~iel~~p~p  128 (128)
T d1klla_          76 EFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPLP  128 (128)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEECC
T ss_pred             eeccchhhHHHHHHHHhccCccccCCeEcCCCcEEEEEECCCCCEEEEEecCC
Confidence            9986   7778999999999986543    57889999999999999998754

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.86  E-value=2.6e-21  Score=123.40  Aligned_cols=112  Identities=20%  Similarity=0.222  Sum_probs=83.4

Q ss_pred             CCCCCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe----EEEEEeeCCCCCCCCCCCC
Q 032146           16 SDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEH   91 (146)
Q Consensus        16 ~~~~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~   91 (146)
                      +..++..+.+|+||.|.|+|++++++||+++|||++.....      ...++...+.    .+.+...  .         
T Consensus         7 p~~p~~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--~---------   69 (146)
T d1f1ua1           7 PSVPAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQG--P---------   69 (146)
T ss_dssp             CSSCCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC--S---------
T ss_pred             CCCCCCCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC------Cceeeecccccccceeecccc--C---------
Confidence            34455679999999999999999999999999999988643      2344443222    1122111  1         


Q ss_pred             CCCccEEEEEeC---CHHHHHHHHHHCCCeEeccC----C-CceEEEEECCCCCeEEEEee
Q 032146           92 GGRDRHTCIAIR---DVSKLKMILDKAGISYTLSK----S-GRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        92 ~~~~~hl~~~v~---d~~~~~~~l~~~G~~~~~~~----~-g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ..+..|++|.+.   |+++++++|+++|+++...+    . .++.+|++|||||+|||++.
T Consensus        70 ~~~~~h~~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~  130 (146)
T d1f1ua1          70 IAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYE  130 (146)
T ss_dssp             SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             CCCCceeeEeeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEe
Confidence            134689999997   68889999999999986532    2 35889999999999999863

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.85  E-value=3.4e-21  Score=124.96  Aligned_cols=126  Identities=13%  Similarity=0.110  Sum_probs=96.9

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCC--CCceEEEEEeCCeEEEEEeeCCCCCCCC------CCCC
Q 032146           20 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWVGAEMIHLMELPNPDPLSG------RPEH   91 (146)
Q Consensus        20 ~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~~   91 (146)
                      ++++.+++||+|.|+|++++++||+++|||++........  .....+.+..++..++|...........      ...+
T Consensus         2 p~~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~   81 (163)
T d1t47a1           2 PFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEH   81 (163)
T ss_dssp             CSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHH
T ss_pred             CCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhcC
Confidence            5779999999999999999999999999999886554322  2334455666888888888665432210      0123


Q ss_pred             CCCccEEEEEeCCHHHHHHHHHHCCCeEeccC-----C--CceEEEEECCCCCeEEEEeec
Q 032146           92 GGRDRHTCIAIRDVSKLKMILDKAGISYTLSK-----S--GRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        92 ~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~-----~--g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      +.+..|+||.|+|+++++++|+++|+++..++     .  ....+++++|+|..++|+|..
T Consensus        82 g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~  142 (163)
T d1t47a1          82 GDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  142 (163)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             CCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEecc
Confidence            46789999999999999999999999986543     1  246789999999999999864

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.84  E-value=1.7e-20  Score=122.02  Aligned_cols=132  Identities=14%  Similarity=0.123  Sum_probs=97.5

Q ss_pred             CCCCCCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEE--EEEeCCeEEEEEeeCCCCCCC------
Q 032146           15 DSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA--WLWVGAEMIHLMELPNPDPLS------   86 (146)
Q Consensus        15 ~~~~~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~------   86 (146)
                      ++.+.++.+.+++||+|.|+|++++++||+++|||+...+..........+  .+..++..+.+..........      
T Consensus         2 ~p~~~~~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~   81 (167)
T d1sqda1           2 NPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPT   81 (167)
T ss_dssp             CCCCCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGG
T ss_pred             CCCCCCCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEeccccccccccccccc
Confidence            356788999999999999999999999999999999887655333222222  234456666665433221110      


Q ss_pred             ---CCC------------CCCCCccEEEEEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeecC
Q 032146           87 ---GRP------------EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVDG  146 (146)
Q Consensus        87 ---~~~------------~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~~  146 (146)
                         ..+            .++.|..|+||.|+|+++++++|+++|+++..+|    .+.+.+++..+.+..++|+++.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~~  160 (167)
T d1sqda1          82 TTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKA  160 (167)
T ss_dssp             CCCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECC
T ss_pred             cccccccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEEEEEEEccCCcEEEEEecCC
Confidence               001            1235779999999999999999999999987654    46777899999999999999864

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=9.8e-21  Score=121.01  Aligned_cols=127  Identities=13%  Similarity=0.098  Sum_probs=95.0

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCC--CceEEEEEeCCeEEEEEeeCCCCCCCC---CCCCCC
Q 032146           19 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL--PYRGAWLWVGAEMIHLMELPNPDPLSG---RPEHGG   93 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~   93 (146)
                      ....+.+++||+|.|+|++++++||+++|||+..........  ....+.+..++..+.|...........   ...++.
T Consensus         5 ~~~~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~   84 (149)
T d1sqia1           5 ERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGD   84 (149)
T ss_dssp             SSCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCS
T ss_pred             CCCceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCC
Confidence            345689999999999999999999999999998765543222  223344556788888877655433211   113456


Q ss_pred             CccEEEEEeCCHHHHHHHHHHCCCeEeccC------CCc-eEEEEECCCCCeEEEEeec
Q 032146           94 RDRHTCIAIRDVSKLKMILDKAGISYTLSK------SGR-PAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~------~g~-~~~~~~DpdG~~ie~~~~~  145 (146)
                      ++.|+||.|+|+++++++|+++|+++..++      .|. +.++++.|.|..++|+|+.
T Consensus        85 G~~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~  143 (149)
T d1sqia1          85 GVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKI  143 (149)
T ss_dssp             EEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             eEEEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeC
Confidence            789999999999999999999999976543      222 4678888888999999975

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.83  E-value=1.9e-19  Score=110.87  Aligned_cols=103  Identities=22%  Similarity=0.323  Sum_probs=82.5

Q ss_pred             EEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCCHHHH
Q 032146           29 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  108 (146)
Q Consensus        29 v~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d~~~~  108 (146)
                      .+|.|+|+++|++||++ |||++.....      ..+++..++..+.+.......+.       ....++++.+++++++
T Consensus         6 p~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~d~~~~   71 (120)
T d1ecsa_           6 PNLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEFFAHPGLDPL-------ASWFSCCLRLDDLAEF   71 (120)
T ss_dssp             EEEEESCHHHHHHHHHT-TTCEEEEECS------SEEEEEETTEEEEEEECTTCCGG-------GCCCEEEEEESCHHHH
T ss_pred             EEEEeCCHHHHHHHHHH-cCCeeEEecC------ceeeeecceeccccccccccccC-------CCCcEEEEEECCHHHH
Confidence            35999999999999988 9999987544      34667778888888776654322       2236799999999999


Q ss_pred             HHHHHHCCCeEec-----------cCCCceEEEEECCCCCeEEEEeec
Q 032146          109 KMILDKAGISYTL-----------SKSGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus       109 ~~~l~~~G~~~~~-----------~~~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      ++.+++.|+.+..           .++|.+.+|++|||||+|||.|.+
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          72 YRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             HHHHhhhhhhhccccccccccceecCCCcEEEEEECCCCCEEEEEEcc
Confidence            9999999987632           235789999999999999999975

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.82  E-value=3.3e-19  Score=116.49  Aligned_cols=130  Identities=12%  Similarity=0.083  Sum_probs=97.4

Q ss_pred             CCCCCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCce--EEEEEeCCeEEEEEeeCCCCCCCC---C--
Q 032146           16 SDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYR--GAWLWVGAEMIHLMELPNPDPLSG---R--   88 (146)
Q Consensus        16 ~~~~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~---~--   88 (146)
                      +.++...+.+++||+|.|+|++++++||+++|||++..+.........  ...+..+...+.+...........   .  
T Consensus         4 ~~~d~~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (172)
T d1sp8a1           4 PRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPS   83 (172)
T ss_dssp             CCCCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTT
T ss_pred             CCCccCCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhccccc
Confidence            456778999999999999999999999999999999865553332222  223444666666655444322110   0  


Q ss_pred             ----------CCCCCCccEEEEEeCCHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEeec
Q 032146           89 ----------PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        89 ----------~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                                ..++.++.|+||.|+|+++++++|+++|+++..++    .+.+.++++.|.+.+++|+|++
T Consensus        84 ~~~~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~  154 (172)
T d1sp8a1          84 FSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYP  154 (172)
T ss_dssp             CCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECC
T ss_pred             CCcchhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCEEEEEEECCCCcEEEEEecC
Confidence                      01356779999999999999999999999987654    5677888998888889999976

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.82  E-value=1.9e-19  Score=110.98  Aligned_cols=101  Identities=17%  Similarity=0.183  Sum_probs=81.5

Q ss_pred             EEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCCHHHHH
Q 032146           30 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK  109 (146)
Q Consensus        30 ~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d~~~~~  109 (146)
                      .|.|+|++++++||+++||+++....+      ..+++..++..+++.........        ...++++.++|+++++
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~~~--------~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR------DFAGVRRGDIRLHISRTEHQIVA--------DNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCHHHH--------TTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC------ceeEeeeeeeeeeeecccccccc--------ceeEEEEeechhHHHH
Confidence            489999999999999999999987644      34778888888888876544321        2368999999999999


Q ss_pred             HHHHHCCCeEecc-----------CCCceEEEEECCCCCeEEEEee
Q 032146          110 MILDKAGISYTLS-----------KSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       110 ~~l~~~G~~~~~~-----------~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +++++.+......           .++++.+|++|||||+|||...
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence            9999998775321           1467899999999999999864

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.81  E-value=8.3e-20  Score=115.95  Aligned_cols=107  Identities=18%  Similarity=0.220  Sum_probs=75.8

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCe----EEEEEeeCCCCCCCCCCCCCCCccE
Q 032146           22 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRH   97 (146)
Q Consensus        22 ~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~h   97 (146)
                      .|.+|+||.|.|+|++++++||+++|||++..+.....     .+....+.    ...+.. . ..         .+..|
T Consensus         4 ~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~-~~---------~~~~~   67 (145)
T d1mpya1           4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGR-----VYLKAWTEVDKFSLVLRE-A-DE---------PGMDF   67 (145)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTSC-----EEEECTTCCBSCSEEEEE-C-SS---------CEEEE
T ss_pred             CCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccCc-----cceecccccceeeccccc-c-Cc---------cccee
Confidence            48899999999999999999999999999887543221     11222211    111111 1 11         12356


Q ss_pred             EEEEeC---CHHHHHHHHHHCCCeEeccC----CC-ceEEEEECCCCCeEEEEee
Q 032146           98 TCIAIR---DVSKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        98 l~~~v~---d~~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DpdG~~ie~~~~  144 (146)
                      +++.+.   |+++++++|+++|+.+...+    ++ ++.+||+|||||.|||++.
T Consensus        68 ~~~~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~  122 (145)
T d1mpya1          68 MGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYAD  122 (145)
T ss_dssp             EEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESC
T ss_pred             eeeeehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEe
Confidence            666665   78999999999999986432    23 4899999999999999863

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.80  E-value=2.6e-19  Score=117.44  Aligned_cols=112  Identities=16%  Similarity=0.201  Sum_probs=79.3

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEe
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  102 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v  102 (146)
                      +.+|+||+|.|+|++++++|| ++|||++..+..........+++..++....+.......         .+..|++|.+
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~H~~f~~   72 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNG---------PRMHHVAFAT   72 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESSB---------SEEEEEEEEC
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccceecccccC---------CCccceeEEe
Confidence            578999999999999999999 689999987555444444556665544422222222211         3469999999


Q ss_pred             CCH---HHHHHHHHHCCCeE--ecc-----CCCceEEEEECCCCCeEEEEee
Q 032146          103 RDV---SKLKMILDKAGISY--TLS-----KSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       103 ~d~---~~~~~~l~~~G~~~--~~~-----~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      .++   .+..++|+++|+..  ...     .....++|++|||||+||++..
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~  124 (176)
T d1f1ua2          73 HEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQ  124 (176)
T ss_dssp             SSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             ccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeC
Confidence            855   45577899999863  222     1345789999999999999763

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.79  E-value=4.3e-19  Score=114.21  Aligned_cols=113  Identities=15%  Similarity=0.166  Sum_probs=75.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCC---CCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPH---DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      .+|+|++|.|+|++++++||+++|||++......   ........++..+.....+.....        +...+++|++|
T Consensus         9 ~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~a~~~~--------~~~~gl~Hiaf   80 (156)
T d1kw3b2           9 QGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAF--------PIPKRIHHFML   80 (156)
T ss_dssp             GCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECC--------SCSSSEEEEEE
T ss_pred             CCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccceeeeccC--------CCCCceeEEEE
Confidence            5899999999999999999999999998754221   011112233333332222211111        11235799999


Q ss_pred             EeCC---HHHHHHHHHHCCCeEeccC----CCceEEEEECCCCC-eEEEEee
Q 032146          101 AIRD---VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDAN-ALEFTQV  144 (146)
Q Consensus       101 ~v~d---~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~-~ie~~~~  144 (146)
                      +|++   +.+++++|+++|+.+..+.    ....++|++||+|| .+|+...
T Consensus        81 ~v~~~ddv~~~~d~l~~~G~~~~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~  132 (156)
T d1kw3b2          81 QANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWG  132 (156)
T ss_dssp             EBSSHHHHHHHHHHHHHTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             ECCCHHHHHHHHHHHHhcCCceecCcccCCCCeEEEEEECCCCCeEEEEecC
Confidence            9985   4556899999998754321    34678999999998 5898653

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.76  E-value=3.2e-17  Score=102.74  Aligned_cols=115  Identities=11%  Similarity=0.044  Sum_probs=82.4

Q ss_pred             eEEEEeCCHHHHHHHHhhhcCCeeccccCCCC-------CCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           28 HVGILCENLERSLEFYQNILGLEINEARPHDK-------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        28 hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      ++.+.+.|+++|++||+++||+++..+.....       ..+..+.+.+++..+.+.......... .+...+...+|++
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~   88 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFS-TAKSEGSGVTFLL   88 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCC-CCCTTSCCCEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCeeeeccccccccccc-cCCCCCcceEEEE
Confidence            46677789999999999999999876443211       123346677788777766544332221 2222233368999


Q ss_pred             EeCCHHHHHHHHHHCCCeEeccC----CCceEEEEECCCCCeEEEEe
Q 032146          101 AIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       101 ~v~d~~~~~~~l~~~G~~~~~~~----~g~~~~~~~DpdG~~ie~~~  143 (146)
                      .++|+++.+.++++.|+++..++    +|.+.++++||+||.|+|.|
T Consensus        89 ~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          89 GTKDAEAAVAKAVDAGAVKVEVTEAEVELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             ECSCHHHHHHHHHHTTCEECCCCHHHHHTTEEEEEECTTSCEEEEEC
T ss_pred             eecCcceeEEEeecccceEecCcccccccCEEEEEECCCCCEEEEeC
Confidence            99999999999999999987764    57899999999999999976

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.76  E-value=2e-17  Score=101.21  Aligned_cols=101  Identities=12%  Similarity=0.133  Sum_probs=79.0

Q ss_pred             EEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeCCHHHH
Q 032146           29 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  108 (146)
Q Consensus        29 v~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~d~~~~  108 (146)
                      ..|.|+|++++++||+++|||++..+.+      ..+++..++..+.+........        .+..++.+.+++++..
T Consensus         8 pvL~v~D~~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~   73 (120)
T d1xrka_           8 PVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQVV--------PDNTQAWVWVRGLDEL   73 (120)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCTTT--------GGGCEEEEEEECHHHH
T ss_pred             EEEEECCHHHHHHHHHHhhCCeEEEECC------CeeEEecccceeeccccccccC--------CCCceEEEeeccHHHH
Confidence            3489999999999999999999988654      3467778888888877654432        2246788999999999


Q ss_pred             HHHHHHCCCeEec--------c---CCCceEEEEECCCCCeEEEEe
Q 032146          109 KMILDKAGISYTL--------S---KSGRPAIFTRDPDANALEFTQ  143 (146)
Q Consensus       109 ~~~l~~~G~~~~~--------~---~~g~~~~~~~DpdG~~ie~~~  143 (146)
                      ++.+.+.+.....        +   .++++.+|++|||||+|||+.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          74 YAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHhhhHHhhhcccccccCceecCCEEEEEEECCCCCEEEEEE
Confidence            9988877655322        1   145689999999999999975

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.69  E-value=1.8e-17  Score=105.80  Aligned_cols=122  Identities=11%  Similarity=0.001  Sum_probs=89.8

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEE
Q 032146           19 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   98 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl   98 (146)
                      +|+.+.+++||.+.|+|++++.+||++ |||+...+....    ....+..++..+.+...++.........++.+..|+
T Consensus         3 np~g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~----~~~l~~~G~i~ll~~~~~~s~~~~~~~~hg~gv~hi   77 (150)
T d1cjxa1           3 NPMGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSK----NVHLYRQGEINLILNNEPNSIASYFAAEHGPSVCGM   77 (150)
T ss_dssp             CTTCEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSS----SEEEEEETTEEEEEECCSSSHHHHHHHHHSSEEEEE
T ss_pred             CCCccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccce----EEEEEecCcEEEEecCCCCCHhHhHHhhCCCceEEE
Confidence            467899999999999999999999987 999998764322    334456676655443322111000112456788999


Q ss_pred             EEEeCCHHHHHHHHHHCCCeEeccC---CCceEEEEECCCCCeEEEEeec
Q 032146           99 CIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  145 (146)
Q Consensus        99 ~~~v~d~~~~~~~l~~~G~~~~~~~---~g~~~~~~~DpdG~~ie~~~~~  145 (146)
                      ||+|+|+++++++++++|+++...+   .......++.|+|.++.|+++.
T Consensus        78 af~V~D~~~a~~~a~~~Ga~~i~~~~~~g~~~~~~i~g~gg~~i~Fv~~~  127 (150)
T d1cjxa1          78 AFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRF  127 (150)
T ss_dssp             EEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCC
T ss_pred             EEEeCCHHHHHHHHHHCCCEEcccCCCCCceeeeEEEcCCCCEEEEECcC
Confidence            9999999999999999999976544   2345678889999999998763

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.42  E-value=6.3e-13  Score=89.43  Aligned_cols=100  Identities=14%  Similarity=0.119  Sum_probs=69.2

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCC-----CCCCceEEEEEe--CCeEEEEEeeCCCCCCCCCC--
Q 032146           19 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH-----DKLPYRGAWLWV--GAEMIHLMELPNPDPLSGRP--   89 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~--   89 (146)
                      +...+.+++||++.|+|++++++||+++|||+.......     ....+....+..  +...+.+.............  
T Consensus         3 ~d~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~   82 (224)
T d1sp8a2           3 ADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQT   82 (224)
T ss_dssp             CCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHH
T ss_pred             CCCCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHH
Confidence            346789999999999999999999999999987654321     222333333433  34467777654432211111  


Q ss_pred             ----CCCCCccEEEEEeCCHHHHHHHHHHCCCe
Q 032146           90 ----EHGGRDRHTCIAIRDVSKLKMILDKAGIS  118 (146)
Q Consensus        90 ----~~~~~~~hl~~~v~d~~~~~~~l~~~G~~  118 (146)
                          ..+.|++||||.|+|+++.++.|+++|+.
T Consensus        83 FL~~~~g~GiqHIAf~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          83 FLDHHGGPGVQHMALASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             HHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGG
T ss_pred             HHHhccCCCceeEEEEeCCHHHHHHHHHhcccc
Confidence                13467899999999999999999988643

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.41  E-value=3.4e-13  Score=89.57  Aligned_cols=100  Identities=14%  Similarity=0.089  Sum_probs=69.3

Q ss_pred             eeeeeeeEEEEeC--CHHHHHHHHhhhcCCeeccccCCCCC--CceEEEEEeC--CeEEEEEeeCCCCCCC-C---CCCC
Q 032146           22 GVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKL--PYRGAWLWVG--AEMIHLMELPNPDPLS-G---RPEH   91 (146)
Q Consensus        22 ~~~~l~hv~l~v~--d~~~~~~FY~~~lg~~~~~~~~~~~~--~~~~~~~~~~--~~~~~l~~~~~~~~~~-~---~~~~   91 (146)
                      .+..++||++.|+  |+++++.||+++|||+.....+....  .+....+...  ...+.+...+...... .   ....
T Consensus         2 Gl~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~   81 (203)
T d1cjxa2           2 GLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFN   81 (203)
T ss_dssp             SEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHT
T ss_pred             CCCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcC
Confidence            4788999999997  99999999999999998875542222  2222323333  3344444443322111 0   0124


Q ss_pred             CCCccEEEEEeCCHHHHHHHHHHCCCeEec
Q 032146           92 GGRDRHTCIAIRDVSKLKMILDKAGISYTL  121 (146)
Q Consensus        92 ~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~  121 (146)
                      +.|++||||.|+|+.+.+++|+++|+++..
T Consensus        82 g~GiqHIAf~vdDI~aav~~L~~~Gv~fL~  111 (203)
T d1cjxa2          82 GEGIQHVAFLTDDLVKTWDALKKIGMRFMT  111 (203)
T ss_dssp             SSBCCEEEEEESCHHHHHHHHHHTTCCBCC
T ss_pred             CCCCceEEEEeCCHHHHHHHHHhcCCcccc
Confidence            567899999999999999999999999754

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.35  E-value=1.2e-11  Score=81.65  Aligned_cols=101  Identities=13%  Similarity=0.131  Sum_probs=68.7

Q ss_pred             eeeeeeeEEEEeC--CHHHHHHHHhhhcCCeeccccC-----CCCCCceEEEEEeC--CeEEEEEeeCCCCCCC--C---
Q 032146           22 GVVSVHHVGILCE--NLERSLEFYQNILGLEINEARP-----HDKLPYRGAWLWVG--AEMIHLMELPNPDPLS--G---   87 (146)
Q Consensus        22 ~~~~l~hv~l~v~--d~~~~~~FY~~~lg~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~--~---   87 (146)
                      .+.+++||++.|+  ++++++.||+++|||+......     .....+...-+..+  ...+.+..........  .   
T Consensus         3 ~f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL   82 (199)
T d1t47a2           3 TFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYL   82 (199)
T ss_dssp             SCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHH
T ss_pred             cceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhh
Confidence            4678999999998  9999999999999999876432     12222332223332  2355555433222111  0   


Q ss_pred             CCCCCCCccEEEEEeCCHHHHHHHHHHCCCeEecc
Q 032146           88 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS  122 (146)
Q Consensus        88 ~~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~~  122 (146)
                      ....+.|++|+||.|+|+.+.++.|+++|+++...
T Consensus        83 ~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~  117 (199)
T d1t47a2          83 EFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDT  117 (199)
T ss_dssp             HHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCC
T ss_pred             hhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCC
Confidence            01234678999999999999999999999997543

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=3e-12  Score=85.19  Aligned_cols=103  Identities=13%  Similarity=0.071  Sum_probs=69.0

Q ss_pred             CCceeeeeeeEEEEeCC--HHHHHHHHhhhcCCeeccccCC-----CCCCceEEEEEeC--CeEEEEEeeCCCCCCC--C
Q 032146           19 IDYGVVSVHHVGILCEN--LERSLEFYQNILGLEINEARPH-----DKLPYRGAWLWVG--AEMIHLMELPNPDPLS--G   87 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d--~~~~~~FY~~~lg~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~--~   87 (146)
                      ++..+..++||++.|++  +++++.||+++|||+.......     ....++...+..+  ...+.|..........  .
T Consensus        18 p~~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~~~~sqi~   97 (210)
T d1sqia2          18 PSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQ   97 (210)
T ss_dssp             CCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC-----CHHH
T ss_pred             CCCCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCCCcccHHH
Confidence            45678999999999987  9999999999999987654321     1122233334433  3356565543221111  0


Q ss_pred             C---CCCCCCccEEEEEeCCHHHHHHHHHHCCCeEec
Q 032146           88 R---PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  121 (146)
Q Consensus        88 ~---~~~~~~~~hl~~~v~d~~~~~~~l~~~G~~~~~  121 (146)
                      .   ...+.|+.|+||.|+|+.+.+++|+++|+++..
T Consensus        98 ~fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~  134 (210)
T d1sqia2          98 EYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLA  134 (210)
T ss_dssp             HHHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCC
T ss_pred             HHHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCC
Confidence            0   134677899999999999999999999999753

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.32  E-value=6.5e-11  Score=73.63  Aligned_cols=106  Identities=14%  Similarity=0.035  Sum_probs=71.9

Q ss_pred             CCHHHHHHHHhhhcCCeeccccCCCC------------CCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEE
Q 032146           34 ENLERSLEFYQNILGLEINEARPHDK------------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  101 (146)
Q Consensus        34 ~d~~~~~~FY~~~lg~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~  101 (146)
                      .|.++|++||+++||+++........            ..+-.+.+.+++..+.+.......     +...+...++++.
T Consensus        12 g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~~~~~d~~~~~-----~~~~~~~~~~~l~   86 (137)
T d1u6la_          12 GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPAY-----PYEGIKGCSISLN   86 (137)
T ss_dssp             SCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTTS-----CCCCCCSEEEEEE
T ss_pred             CCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCeEEEecccCCcc-----cccCCCcEEEEEE
Confidence            39999999999999999865321111            122235577777766554432221     1122334789999


Q ss_pred             eCCHH--HHHHHHHHCCCeEecc----CCCceEEEEECCCCCeEEEEee
Q 032146          102 IRDVS--KLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       102 v~d~~--~~~~~l~~~G~~~~~~----~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +++.|  +.+.++.+.|.++..+    ++|.+.++++||+|+.|+|...
T Consensus        87 ~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          87 VDSKAEAERLFNALAEGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             CSSHHHHHHHHHHHHTTSEEEEEEEEETTEEEEEEEECTTSCEEEEEES
T ss_pred             cCCHHHHHHHHhhcccCceeecCccccCCCcEEEEEECCCCCEEEEEec
Confidence            88655  4477778899998654    3677899999999999998754

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.24  E-value=2e-11  Score=82.25  Aligned_cols=99  Identities=15%  Similarity=0.159  Sum_probs=67.6

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCC-----CCceEEEEEe--CCeEEEEEeeCCCCCCCCC---
Q 032146           19 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWV--GAEMIHLMELPNPDPLSGR---   88 (146)
Q Consensus        19 ~~~~~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~---   88 (146)
                      .+..+.+|+||++.|+|++++.+||.++||+..........     ..+....+..  +...+.+............   
T Consensus        16 ~~~gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l~E~~~~~~~~sqi~~   95 (230)
T d1sqda2          16 LDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQT   95 (230)
T ss_dssp             CCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHH
T ss_pred             CCCCcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccceeEEeecCCCCCcchHHH
Confidence            34568999999999999999999999999998876544222     1122222222  3447777765433221111   


Q ss_pred             ---CCCCCCccEEEEEeCCHHHHHHHHHHCCC
Q 032146           89 ---PEHGGRDRHTCIAIRDVSKLKMILDKAGI  117 (146)
Q Consensus        89 ---~~~~~~~~hl~~~v~d~~~~~~~l~~~G~  117 (146)
                         ...+.|++||||.|+|+.+.++.|+++|.
T Consensus        96 FL~~~~G~GiQHIAf~tdDI~aav~~LrarG~  127 (230)
T d1sqda2          96 YLEHNEGAGLQHLALMSEDIFRTLREMRKRSS  127 (230)
T ss_dssp             HHHHHTSCEEEEEEEEESCHHHHHHHHHHHGG
T ss_pred             HHhhccCCceeEEEEEeCCHHHHHHHHHHhhc
Confidence               13467889999999999999999998653

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.13  E-value=7.8e-09  Score=63.84  Aligned_cols=110  Identities=8%  Similarity=0.020  Sum_probs=73.4

Q ss_pred             eEEEEeCCHHHHHHHHhhhcCCeecccc-------CCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEE
Q 032146           28 HVGILCENLERSLEFYQNILGLEINEAR-------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  100 (146)
Q Consensus        28 hv~l~v~d~~~~~~FY~~~lg~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~  100 (146)
                      ++.+.-+|.+++++||+++||.+.....       +.....+-.+.+.+++..+.+........    +.. +....+++
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~~i~~~d~~~~~~----~~~-~~~~s~~l   83 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRHA----FDF-TPAFSFFV   83 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCCS----CCC-CTTEEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCEEEEEecCCCCCC----CCC-CCceEEEE
Confidence            5555667999999999999998653211       11222344577888888887766443221    111 22367888


Q ss_pred             EeCCHHHH--HHHHHHCCCeEecc----CCCceEEEEECCCCCeEEEE
Q 032146          101 AIRDVSKL--KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  142 (146)
Q Consensus       101 ~v~d~~~~--~~~l~~~G~~~~~~----~~g~~~~~~~DpdG~~ie~~  142 (146)
                      .+++.++.  +.+..+.|.++..+    .++.+...++||.|+.|.|.
T Consensus        84 ~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          84 DCESNAQIERLAEALSDGGKALMPLGDYGFSQRFAWLADRFGVSWQLN  131 (134)
T ss_dssp             ECCCHHHHHHHHHHHHTTSEEEEEEECCSSSSEEEEEECTTSCEEEEE
T ss_pred             EeccHHHHHHHHHHHhcCCEEecCcccccccceEEEEECCCCCEEEEE
Confidence            88865554  45555678777543    36789999999999999885

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.78  E-value=2.4e-07  Score=56.62  Aligned_cols=105  Identities=10%  Similarity=0.105  Sum_probs=66.4

Q ss_pred             EEEeC-CHHHHHHHHhhhcCCe-ecccc------CCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEE
Q 032146           30 GILCE-NLERSLEFYQNILGLE-INEAR------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  101 (146)
Q Consensus        30 ~l~v~-d~~~~~~FY~~~lg~~-~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~  101 (146)
                      -|..+ |.+++++||+++||-. +....      +.....+-.+.+.+++..+.+........        . ...+++.
T Consensus         9 yl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~~~~~~d~~~~~~--------~-~~s~~v~   79 (129)
T d1tsja_           9 FLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANSGTE--------L-PISLFVT   79 (129)
T ss_dssp             EEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC----------------CCCEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCEEEEeecCCCCCC--------C-CEEEEec
Confidence            34554 9999999999999653 33211      11223345577888888876655433221        1 1457888


Q ss_pred             eCCHHHH---HHHHHHCCCeEecc----CCCceEEEEECCCCCeEEEEee
Q 032146          102 IRDVSKL---KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       102 v~d~~~~---~~~l~~~G~~~~~~----~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      +++.+++   +++| +.|.++..+    +++.+...++||.|+.|.|..+
T Consensus        80 ~~~~~e~~~~~~~L-~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          80 VKDTIEMERLFNGL-KDEGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CSSHHHHHHHHHHH-HTTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             cCCHHHHHHHHHHh-ccCCEEecccccccccceEEEEECCCCCEEEEeCC
Confidence            8876664   4455 456576543    3677888999999999998754

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.73  E-value=0.0013  Score=40.85  Aligned_cols=100  Identities=12%  Similarity=-0.032  Sum_probs=61.4

Q ss_pred             EeCCHHHHHHHHhhhcCC-eeccc--cC-----CCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEEeC
Q 032146           32 LCENLERSLEFYQNILGL-EINEA--RP-----HDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  103 (146)
Q Consensus        32 ~v~d~~~~~~FY~~~lg~-~~~~~--~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~v~  103 (146)
                      .-.|.++|.+||.++||- ++...  .+     .....+-.+.+.+++..+.+..... .    . +.+. ..+|++.++
T Consensus         9 F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g~~lm~sD~~~-~----~-~~~~-~~sl~l~~d   81 (156)
T d1u69a_           9 YDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGP-A----F-RHSE-AFSFQVATD   81 (156)
T ss_dssp             ESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECCT-T----C-CCCT-TEEEEEEES
T ss_pred             ECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECCeEEEeecCCC-C----C-CCCC-CeEEEEecC
Confidence            347999999999999954 33321  11     1122344567788887665443211 1    1 1112 367999998


Q ss_pred             C---HHHHHHHHHHCCCeEeccCCCceEEEEECCCCCeEEEEee
Q 032146          104 D---VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus       104 d---~~~~~~~l~~~G~~~~~~~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      |   +++++++|.+-|- +..+     ...++|..|..|.|+..
T Consensus        82 ~~eE~d~~f~~LsegG~-~~~~-----~G~v~DkFGV~Wqi~~~  119 (156)
T d1u69a_          82 DQAETDRLWNAIVDNGG-EESA-----CGWCRDKWGISWQITPR  119 (156)
T ss_dssp             SHHHHHHHHHHHHHTTC-EECS-----TTEEECTTSCEEEEEEH
T ss_pred             CHHHHHHHHHHHhccCC-CCCC-----CeEEECCCCCEEEeChH
Confidence            6   4556777777662 2222     12699999999999753

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.12  E-value=0.012  Score=36.11  Aligned_cols=59  Identities=15%  Similarity=0.078  Sum_probs=43.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeCCCC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPD   83 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~   83 (146)
                      .+++||++.|.|++++.+...+ .|.+....-.......+.+++.. |+..+.|+......
T Consensus       103 ~G~~Hiaf~VdDi~aa~~~l~~-~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~~~~  162 (167)
T d1sqda1         103 LGVRAVAIEVEDAESAFSISVA-NGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKAED  162 (167)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECCC-
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCEEecCCeecCCCEEEEEEEccCCcEEEEEecCCCc
Confidence            3799999999999999999988 79887753222223445555544 88899999876543

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=95.91  E-value=0.012  Score=36.52  Aligned_cols=59  Identities=14%  Similarity=0.123  Sum_probs=44.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeCCCC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPD   83 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~   83 (146)
                      .+++|++|.|.|++++.+-..+ .|.++...-.....+.+.+++.. ++..++|+..++..
T Consensus        98 ~Gi~Hiaf~VdDi~aa~~~l~~-~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~~~~  157 (172)
T d1sp8a1          98 LAVRAVALRVADAEDAFRASVA-AGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYPDGA  157 (172)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHT-TTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECCTTG
T ss_pred             CceEEEEEeeCcHHHHHHHHHH-CcCEeccCCccCCCCEEEEEEECCCCcEEEEEecCCCC
Confidence            3789999999999999999977 89887653222223445566655 78899999988764

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=95.68  E-value=0.031  Score=31.50  Aligned_cols=50  Identities=22%  Similarity=0.335  Sum_probs=39.4

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEECCCCCeEEEEee
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      ++.|+.|.|+|+++..+.+.+ .|.++.... +....+..++++..+.+.+.
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~-~~~~~~~~~~~~~~~~~~~~   53 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTR-GNAFAVMRDNDGFILTLMKG   53 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEE-TTTEEEEECTTCCEEEEEEC
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEee-cCcceeeeecceeeeeeeee
Confidence            468999999999999999887 699886544 34556677888888877654

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=95.10  E-value=0.057  Score=31.88  Aligned_cols=56  Identities=16%  Similarity=0.160  Sum_probs=37.9

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEee
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMEL   79 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~   79 (146)
                      -.++.|+.+.|.|+++..+..++ .|.++.............+|+.- .+..++|.+.
T Consensus        91 ~~g~~hi~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          91 ALGYLRVMFTVEDIDEMVSRLTK-HGAELVGEVVQYENSYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             SBEEEEEEEEESCHHHHHHHHHH-TTCEESSCCEEETTTEEEEEEECGGGCEEEEEEE
T ss_pred             CcceeEEEEeechhHHHHHHHHH-CCCeEccCCeECCCCeEEEEEECCCCCEEEEEEc
Confidence            35799999999999999999987 79888653222222334455543 3457777653

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=94.25  E-value=0.066  Score=31.33  Aligned_cols=57  Identities=14%  Similarity=0.238  Sum_probs=39.0

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCC-CCCceEEEEEe---CCeEEEEEeeC
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWV---GAEMIHLMELP   80 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~-~~~~~~~~~~~---~~~~~~l~~~~   80 (146)
                      -.+++|+++.|.|++++.+-.++ .|.++....+.. ..+...+|+..   ++..++|++.+
T Consensus        84 ~~g~~Hia~~v~di~~~~~~l~~-~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          84 RAGLHHMAWRVDDIDAVSATLRE-RGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHH-HTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCcceEEEEecchHHHHHHHHHH-CCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            35799999999999999999988 699876533221 12223444422   56688887754

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=94.17  E-value=0.094  Score=31.69  Aligned_cols=56  Identities=11%  Similarity=0.041  Sum_probs=39.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeCC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN   81 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~   81 (146)
                      .+++|+++.|.|++++.+...+ +|.+....... ........+.. ++..+.++....
T Consensus        72 ~gv~hiaf~V~D~~~a~~~a~~-~Ga~~i~~~~~-~g~~~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          72 PSVCGMAFRVKDSQKAYNRALE-LGAQPIHIDTG-PMELNLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCBCCCCCC-TTCBCCCEEECGGGCEEEEECCCS
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCEEcccCCC-CCceeeeEEEcCCCCEEEEECcCC
Confidence            4799999999999999999977 89988765432 22223333443 677888887544

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=93.74  E-value=0.3  Score=28.51  Aligned_cols=58  Identities=7%  Similarity=0.017  Sum_probs=34.8

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhh--hcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeCCC
Q 032146           23 VVSVHHVGILCENLERSLEFYQN--ILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP   82 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~--~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~   82 (146)
                      ..+++|+++.|.|.+.-.+|...  ..|+.+.....  .......|+.- ++..++|+.....
T Consensus        75 ~~~~~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~~--~~~~~~~yf~DPdG~~iEl~~~~~~  135 (144)
T d1zswa1          75 TNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTT--YANRPALQFEDAEGLRLVLLVSNGE  135 (144)
T ss_dssp             BSEEEEEEEEESCHHHHHHHHHHHHHTTCEECCSEE--ETTEEEEEEECTTCCEEEEEECTTC
T ss_pred             CCceeEEEEecCCchhHHHHhhhhhccceeeeCccc--cCCeEEEEEECCCCCEEEEEEeCCC
Confidence            44699999999996655554433  35666543221  12234455544 5669998876543

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=92.81  E-value=0.16  Score=29.14  Aligned_cols=47  Identities=13%  Similarity=0.120  Sum_probs=32.8

Q ss_pred             ccEEEEEeCCHHHHHHHHHHCCCeEeccCCCceEEEEECCCCCeEEE
Q 032146           95 DRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF  141 (146)
Q Consensus        95 ~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~g~~~~~~~DpdG~~ie~  141 (146)
                      +.|+++.|.|+++..+...+.|..+.........+.+..+.+..+.+
T Consensus         3 i~hv~l~V~D~~~s~~FY~~Lg~~~~~~~~~~~~~~~~~~~~~~~~~   49 (128)
T d1klla_           3 ISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAW   49 (128)
T ss_dssp             CCEEEEEESCHHHHHHHHHHTTCCCCTTGGGCSEEEEECGGGCEEEE
T ss_pred             EeEEEEEcCCHHHHHHHHHHhCCccccccccccceeeeccceeeeee
Confidence            68999999999999999988888765543333334444445555544

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=92.66  E-value=0.17  Score=29.37  Aligned_cols=48  Identities=19%  Similarity=0.174  Sum_probs=33.3

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEeccCCCceEEEEE-CCCCCeEEEEe
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTR-DPDANALEFTQ  143 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~g~~~~~~~-DpdG~~ie~~~  143 (146)
                      ++.|++|.|.|+++..+...+ .|.++.....+  .+++. |-..+.+.+.+
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~~--~~~l~~~~~~~~l~l~~   53 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN--GDLFRIDSRAWRIAVQQ   53 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT--EEEEESSSBSCSEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecCCc--ceEEeecCCceEEEEec
Confidence            368999999999999999998 59988765432  23332 33344555543

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.61  E-value=0.15  Score=30.20  Aligned_cols=59  Identities=19%  Similarity=0.084  Sum_probs=40.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeecccc---CCCCCCceEEEEEe-CCeEEEEEeeCCCC
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINEAR---PHDKLPYRGAWLWV-GAEMIHLMELPNPD   83 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~---~~~~~~~~~~~~~~-~~~~~~l~~~~~~~   83 (146)
                      .+++|+++.|.|++++.+-..+ .|.+....-   ......++.+++.. ++..++|++.....
T Consensus        84 ~G~~hiaf~V~di~~~~~~l~~-~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~  146 (149)
T d1sqia1          84 DGVKDIAFEVEDCEHIVQKARE-RGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYT  146 (149)
T ss_dssp             SEEEEEEEEEECHHHHHHHHHH-HTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCC
T ss_pred             CeEEEEEEEeccHHHHHHHHHH-CCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCc
Confidence            4789999999999999999977 788765421   11112223344443 56788888876654

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=92.39  E-value=0.21  Score=30.11  Aligned_cols=52  Identities=12%  Similarity=0.111  Sum_probs=36.0

Q ss_pred             CCccEEEEEeCCHHHHHHHHHH-CCCeEeccC-----CCceEEEEECCCCCeEEEEee
Q 032146           93 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK-----SGRPAIFTRDPDANALEFTQV  144 (146)
Q Consensus        93 ~~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~-----~g~~~~~~~DpdG~~ie~~~~  144 (146)
                      .++.|++|.|.|+++..+++.+ .|.+.....     ......++....+..+++.+.
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~   63 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSV   63 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEE
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEecc
Confidence            4579999999999999999986 799875321     123344444455566777654

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=91.69  E-value=0.23  Score=30.28  Aligned_cols=31  Identities=13%  Similarity=0.149  Sum_probs=27.0

Q ss_pred             CCccEEEEEeCCHHHHHHHHHH-CCCeEeccC
Q 032146           93 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK  123 (146)
Q Consensus        93 ~~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~  123 (146)
                      .|+.|++|.|.|+++..+.+.+ .|+++....
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~   42 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRN   42 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEeec
Confidence            5689999999999999999988 699987654

>d1k4na_ d.32.1.5 (A:) Hypothetical protein YecM (EC4020) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YecM (EC4020)
domain: Hypothetical protein YecM (EC4020)
species: Escherichia coli [TaxId: 562]

Probab=90.47  E-value=1.2  Score=27.70  Aligned_cols=95  Identities=18%  Similarity=0.155  Sum_probs=57.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeecc-ccCCCCCCceEE----EEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEE
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINE-ARPHDKLPYRGA----WLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   98 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~-~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl   98 (146)
                      -.++|+.++|++.+.+.+|-...+-+--.- +..-.+......    -+..++..+..+..+-+... ..|.  .|+-|+
T Consensus        42 ~~~DHialR~n~~~~A~~w~~~l~~~G~llSen~INGRPI~l~~L~~Pl~~~~~~I~ciELP~P~~k-~Yp~--eGWEHI  118 (190)
T d1k4na_          42 LTADHISLRCHQNATAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPGEK-RYPH--EGWEHI  118 (190)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEECCCSS-CCSS--CEEEEE
T ss_pred             ccCcEEEEeeCCHHHHHHHHHHHHHhchhhhcCeeCCeeEEEEEcCCCceeCCcEEEEEEeCCCCCC-CCCC--CCceEE
Confidence            358999999999999999999988764432 211111111111    12336777777777665432 1222  457899


Q ss_pred             EEEeC-CHHHHHHH---------HHHCCCeEec
Q 032146           99 CIAIR-DVSKLKMI---------LDKAGISYTL  121 (146)
Q Consensus        99 ~~~v~-d~~~~~~~---------l~~~G~~~~~  121 (146)
                      -+.++ +.+.+.++         +...|+++..
T Consensus       119 ElVlp~~~~t~~~~~~~ll~~~~l~~~gikvK~  151 (190)
T d1k4na_         119 EIVLPGDPETLNARALALLSDEGLSLPGISVKT  151 (190)
T ss_dssp             EEECCSCGGGHHHHHHHTSCHHHHHSTTCEEEE
T ss_pred             EEEecCCHHHHHHHHHHhcchhhccCCCceEEe
Confidence            99998 33333222         3345887753

>d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase Atu2258
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=89.61  E-value=0.39  Score=28.12  Aligned_cols=33  Identities=15%  Similarity=0.040  Sum_probs=24.4

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCC
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPHDK   59 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~   59 (146)
                      ++.++.+.+.|.. +++||++ +||+...+.+...
T Consensus        93 g~~~i~l~~~n~~-a~~fY~k-~GF~~~g~~~~~~  125 (137)
T d2g3aa1          93 GCMGAYIDTMNPD-ALRTYER-YGFTKIGSLGPLS  125 (137)
T ss_dssp             TCCEEEEEESCHH-HHHHHHH-HTCEEEEEECCCT
T ss_pred             CCceEEEecccHh-hHHHHHh-CCCEEEEEECCCC
Confidence            4556777777764 7999988 8999987666433

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=89.21  E-value=0.63  Score=26.82  Aligned_cols=30  Identities=27%  Similarity=0.247  Sum_probs=25.9

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEeccC
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK  123 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~  123 (146)
                      .+.|++|.|+|+++..+.+.+ .|.++....
T Consensus         4 ~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~   34 (132)
T d1kw3b1           4 RLGYLGFAVKDVPAWDHFLTKSVGLMAAGSA   34 (132)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHHhCCceeccc
Confidence            468999999999999999998 599986554

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.74  E-value=1.1  Score=26.87  Aligned_cols=57  Identities=14%  Similarity=0.193  Sum_probs=41.8

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHhhhcCCeeccccCCCCCCceEEEEEe-CCeEEEEEeeCC
Q 032146           23 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN   81 (146)
Q Consensus        23 ~~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~   81 (146)
                      ..++.|+.+.+.|+++..+.+++ .|.+..... ........+|++- .+..+||++...
T Consensus       114 ~~g~~h~~~~~~d~~~~~~~l~~-~Gv~~~~~p-~~g~~~~~~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_         114 PRGFGHIGIAVPDVYSACKRFEE-LGVKFVKKP-DDGKMKGLAFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             SCBEEEEEEECSCHHHHHHHHHH-TTCEEEECT-TSSSSTTCEEEECTTCCEEEEECTTT
T ss_pred             ccceeEEEeeHHHHHHHHHHHHH-CCCEEeeCC-ccCCceEEEEEECCCCCEEEEEeCCC
Confidence            35899999999999999999986 799888643 2333334466654 567999988643

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=85.68  E-value=1.1  Score=25.91  Aligned_cols=29  Identities=17%  Similarity=0.082  Sum_probs=25.0

Q ss_pred             ccEEEEEeCCHHHHHHHHHH-CCCeEeccC
Q 032146           95 DRHTCIAIRDVSKLKMILDK-AGISYTLSK  123 (146)
Q Consensus        95 ~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~  123 (146)
                      +.|++|.|+|+++..+.+.+ .|..+....
T Consensus         8 l~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~   37 (145)
T d1mpya1           8 PGHVQLRVLDMSKALEHYVELLGLIEMDRD   37 (145)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCEEEEee
Confidence            57999999999999999976 799987544

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=85.46  E-value=1.3  Score=26.92  Aligned_cols=28  Identities=21%  Similarity=0.218  Sum_probs=24.4

Q ss_pred             CccEEEEEeCCHHHHHHHHHHCCCeEec
Q 032146           94 RDRHTCIAIRDVSKLKMILDKAGISYTL  121 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~~G~~~~~  121 (146)
                      .+.|++|.|.|+++..+..+..|.++..
T Consensus         5 rl~Hv~l~v~Dle~s~~FYe~LGf~~~d   32 (176)
T d1f1ua2           5 RLDHFNQVTPDVPRGRAYLEDLGFRVSE   32 (176)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCEEEE
T ss_pred             EeeeEEEEcCCHHHHHHHHHHCCCEEEE
Confidence            3689999999999999988889998753

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=85.19  E-value=1.2  Score=25.92  Aligned_cols=32  Identities=19%  Similarity=0.151  Sum_probs=26.6

Q ss_pred             CCccEEEEEeCCHHHHHHHHHH-CCCeEeccCC
Q 032146           93 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKS  124 (146)
Q Consensus        93 ~~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~  124 (146)
                      .++.|+.|.|.|+++..+...+ .|.++.....
T Consensus        15 ~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~   47 (146)
T d1f1ua1          15 VRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE   47 (146)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS
T ss_pred             cEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC
Confidence            4468999999999999999986 7999876543

>d1y9wa1 d.108.1.1 (A:1-140) Probable acetyltransferase BC2806 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase BC2806
species: Bacillus cereus [TaxId: 1396]

Probab=84.77  E-value=0.45  Score=27.77  Aligned_cols=31  Identities=13%  Similarity=0.162  Sum_probs=22.8

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeeccccCC
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINEARPH   57 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~~   57 (146)
                      +...+.+.+.|. .|++||++ +||+...+.+.
T Consensus        96 g~~~i~l~~~n~-~A~~fY~k-~GF~~~g~~~~  126 (140)
T d1y9wa1          96 GCRLILLDSFSF-QAPEFYKK-HGYREYGVVED  126 (140)
T ss_dssp             TCCEEEEEEEGG-GCHHHHHH-TTCEEEEEESS
T ss_pred             cceEEEEeechh-hHHHHHHh-CCCEEEEEECC
Confidence            455666777664 58999988 89999876543

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=84.70  E-value=0.49  Score=29.91  Aligned_cols=29  Identities=17%  Similarity=0.480  Sum_probs=24.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhhhcCCeecc
Q 032146           24 VSVHHVGILCENLERSLEFYQNILGLEINE   53 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~   53 (146)
                      .+++||++.|+|+.++++..++ -|++...
T Consensus        83 ~GiqHIAf~vdDI~aav~~L~~-~Gv~fL~  111 (203)
T d1cjxa2          83 EGIQHVAFLTDDLVKTWDALKK-IGMRFMT  111 (203)
T ss_dssp             SBCCEEEEEESCHHHHHHHHHH-TTCCBCC
T ss_pred             CCCceEEEEeCCHHHHHHHHHh-cCCcccc
Confidence            4699999999999999999977 5776654

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=83.81  E-value=0.49  Score=30.41  Aligned_cols=22  Identities=23%  Similarity=0.392  Sum_probs=20.2

Q ss_pred             eeeeeEEEEeCCHHHHHHHHhh
Q 032146           24 VSVHHVGILCENLERSLEFYQN   45 (146)
Q Consensus        24 ~~l~hv~l~v~d~~~~~~FY~~   45 (146)
                      .+++||++.|.|+.++++..++
T Consensus        90 ~GiqHIAf~vdDI~~av~~L~a  111 (224)
T d1sp8a2          90 PGVQHMALASDDVLRTLREMQA  111 (224)
T ss_dssp             SEEEEEEEEETTHHHHHHHHHT
T ss_pred             CCceeEEEEeCCHHHHHHHHHh
Confidence            4799999999999999999876

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=82.25  E-value=1.5  Score=24.66  Aligned_cols=28  Identities=18%  Similarity=0.264  Sum_probs=23.5

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEec
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTL  121 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~  121 (146)
                      ++.|++|.|.|+++..+...+ .|.++..
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~   32 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREVY   32 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEE
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEEE
Confidence            468999999999999888875 6888754

>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: BT0572-like
domain: Hypothetical protein BT0572
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=82.01  E-value=1.1  Score=23.04  Aligned_cols=27  Identities=11%  Similarity=0.158  Sum_probs=23.7

Q ss_pred             cEEEEEeCCHHHHHHHHHHCCCeEecc
Q 032146           96 RHTCIAIRDVSKLKMILDKAGISYTLS  122 (146)
Q Consensus        96 ~hl~~~v~d~~~~~~~l~~~G~~~~~~  122 (146)
                      ..+.|.++|.+.+.+.|+++|+++...
T Consensus        39 ~~~vl~vdd~~~a~~~L~~~G~~vl~~   65 (71)
T d2f06a1          39 ANVVIRPSNMDKCIEVLKEKKVDLLAA   65 (71)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCEEECH
T ss_pred             EEEEEEECCHHHHHHHHHHCCCEEEch
Confidence            458999999999999999999987653

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=81.87  E-value=1.3  Score=25.43  Aligned_cols=29  Identities=17%  Similarity=0.275  Sum_probs=25.2

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEecc
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLS  122 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~  122 (146)
                      ++.|++|.|.|+++..+...+ .|.++...
T Consensus         4 ~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~   33 (140)
T d1npba_           4 SLNHLTLAVSDLQKSVTFWHELLGLTLHAR   33 (140)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTSCCEEEEE
T ss_pred             cEeEEEEEeCCHHHHHHHHHHHhCCEEEEE
Confidence            478999999999999999987 79988644

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.66  E-value=1.6  Score=24.73  Aligned_cols=30  Identities=13%  Similarity=0.127  Sum_probs=25.1

Q ss_pred             CccEEEEEeCCHHHHHHHHHH-CCCeEeccC
Q 032146           94 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK  123 (146)
Q Consensus        94 ~~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~  123 (146)
                      ++.|++|.|.|+++..+.+.+ .|+++....
T Consensus         4 ~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~   34 (134)
T d1nkia_           4 GLNHLTLAVADLPASIAFYRDLLGFRLEARW   34 (134)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhhCCeEEEec
Confidence            468999999999999999987 588876543

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=81.57  E-value=1.1  Score=26.66  Aligned_cols=28  Identities=14%  Similarity=0.146  Sum_probs=24.9

Q ss_pred             CCccEEEEEeCCHHHHHHHHHH-CCCeEe
Q 032146           93 GRDRHTCIAIRDVSKLKMILDK-AGISYT  120 (146)
Q Consensus        93 ~~~~hl~~~v~d~~~~~~~l~~-~G~~~~  120 (146)
                      .|+.|++|.|.|+++..+.+.+ .|.++.
T Consensus         9 ~GlgHv~l~v~D~e~t~~FY~~vLG~~~~   37 (156)
T d1kw3b2           9 QGIGHFVRCVPDTAKAMAFYTEVLGFVLS   37 (156)
T ss_dssp             GCSCEEEEECSCHHHHHHHHHHTTCCEEE
T ss_pred             CCcceEEEecCCHHHHHHHHHHhcCceee
Confidence            5689999999999999999986 799874

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.57  E-value=0.73  Score=29.72  Aligned_cols=86  Identities=14%  Similarity=0.155  Sum_probs=51.9

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhh---cCCeeccccCCCCCCceEEEEEeCCeEEEEEeeCCCCCCCCCCCCCCCccEEEEE
Q 032146           25 SVHHVGILCENLERSLEFYQNI---LGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  101 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~---lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hl~~~  101 (146)
                      +++||++.|+|+.++++-.++.   .|++..-..+.      .+|                +.             +.=+
T Consensus       104 GiQHIAf~tdDI~aav~~LrarG~~~G~~f~~~~p~------~YY----------------~~-------------l~~r  148 (230)
T d1sqda2         104 GLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSPPP------TYY----------------QN-------------LKKR  148 (230)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCCCH------HHH----------------HH-------------HHHH
T ss_pred             ceeEEEEEeCCHHHHHHHHHHhhcccCcccccCCch------HHH----------------HH-------------HHHH
Confidence            7999999999999999999763   24433211110      000                00             0001


Q ss_pred             eC--CHHHHHHHHHHCCCeEeccCCCceEEEEECC----CCCeEEEEeec
Q 032146          102 IR--DVSKLKMILDKAGISYTLSKSGRPAIFTRDP----DANALEFTQVD  145 (146)
Q Consensus       102 v~--d~~~~~~~l~~~G~~~~~~~~g~~~~~~~Dp----dG~~ie~~~~~  145 (146)
                      .+  -.++..++|+++++.+.....|...-.+.-|    .+.-+||+|+.
T Consensus       149 ~~~~l~~~~~~~l~~~~IL~D~d~~g~llqifT~~~~~~~t~FfEiIqR~  198 (230)
T d1sqda2         149 VGDVLSDDQIKECEELGILVDRDDQGTLLQIFTKPLGDRPTIFIEIIQRV  198 (230)
T ss_dssp             HTTTSCHHHHHHHHHHTCEEEECSSEEEEEEEBCCSSSSSCCEEEEEEEE
T ss_pred             hccccchHhHHHHHHcCCcccCCCCCeEEEEeccccCCCCCcEEEEEEec
Confidence            11  1266778899999998877655433334444    26888999873

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.45  E-value=0.76  Score=29.21  Aligned_cols=28  Identities=18%  Similarity=0.432  Sum_probs=24.1

Q ss_pred             eeeeEEEEeCCHHHHHHHHhhhcCCeecc
Q 032146           25 SVHHVGILCENLERSLEFYQNILGLEINE   53 (146)
Q Consensus        25 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~   53 (146)
                      ++.||++.|+|+.++++.+++ -|++...
T Consensus       107 GiQHIAf~t~DI~~av~~L~~-~Gv~fL~  134 (210)
T d1sqia2         107 GVQHIALRTEDIITTIRHLRE-RGMEFLA  134 (210)
T ss_dssp             EEEEEEEEESCHHHHHHHHHH-HTCCBCC
T ss_pred             CeeEEEEEcCCHHHHHHHHHH-cCCCCCC
Confidence            799999999999999999987 4666554