Query 032148
Match_columns 146
No_of_seqs 142 out of 1086
Neff 5.2
Searched_HMMs 13730
Date Mon Mar 25 16:33:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032148.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032148hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2dlqa2 g.37.1.1 (A:35-62) GLI 21.9 9 0.00065 19.6 0.0 12 57-69 1-12 (28)
2 d1nekb1 a.1.2.1 (B:107-238) Su 15.8 35 0.0025 22.1 2.0 13 54-67 37-49 (132)
3 d1g1pa_ g.3.6.1 (A:) Conotoxin 15.4 28 0.002 18.1 1.0 14 47-60 7-20 (32)
4 d1rk8c_ b.72.3.1 (C:) Pym (Wit 11.6 11 0.00079 20.2 -1.4 19 11-29 7-28 (33)
5 d1f5ta2 a.76.1.1 (A:1065-1121) 11.2 38 0.0028 19.2 0.9 17 129-145 22-38 (57)
6 d1bhia_ g.37.1.1 (A:) Transact 10.7 40 0.0029 18.4 0.8 11 116-126 3-13 (38)
7 d2isya2 a.76.1.1 (A:65-140) Ir 10.4 54 0.0039 19.7 1.5 18 128-145 21-38 (76)
8 d2c42a5 d.58.1.5 (A:669-785) P 9.7 30 0.0022 21.9 0.0 10 57-67 74-83 (117)
9 d2dmda3 g.37.1.1 (A:62-90) Zin 9.2 42 0.0031 17.1 0.5 12 117-128 1-12 (29)
10 d1iqza_ d.58.1.4 (A:) Ferredox 8.0 37 0.0027 20.3 -0.1 15 57-72 8-22 (81)
No 1
>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.92 E-value=9 Score=19.65 Aligned_cols=12 Identities=33% Similarity=0.991 Sum_probs=8.5
Q ss_pred CCcchhhhhHhcC
Q 032148 57 LWRCVQGCGACCK 69 (146)
Q Consensus 57 ~f~C~~gCG~CC~ 69 (146)
.|.|. .||.|=.
T Consensus 1 pf~c~-kcgkcyf 12 (28)
T d2dlqa2 1 PFECP-KCGKCYF 12 (28)
T ss_dssp SCBCT-TTCCBCS
T ss_pred CCccc-cchhhhh
Confidence 37885 8988753
No 2
>d1nekb1 a.1.2.1 (B:107-238) Succinate dehydogenase {Escherichia coli [TaxId: 562]}
Probab=15.81 E-value=35 Score=22.09 Aligned_cols=13 Identities=31% Similarity=1.193 Sum_probs=9.5
Q ss_pred CCCCCcchhhhhHh
Q 032148 54 MEPLWRCVQGCGAC 67 (146)
Q Consensus 54 ~~~~f~C~~gCG~C 67 (146)
......|. .||.|
T Consensus 37 ~~~~~~CI-~CG~C 49 (132)
T d1nekb1 37 LDGLYECI-LCACC 49 (132)
T ss_dssp TTTTSCCC-CCCHH
T ss_pred HHhhHHHh-Hhhhh
Confidence 34567886 88888
No 3
>d1g1pa_ g.3.6.1 (A:) Conotoxin {Conus ermineus, E VIa [TaxId: 55423]}
Probab=15.38 E-value=28 Score=18.06 Aligned_cols=14 Identities=21% Similarity=0.161 Sum_probs=8.6
Q ss_pred cccccccCCCCCcc
Q 032148 47 VGFGIEKMEPLWRC 60 (146)
Q Consensus 47 ~gf~~~~~~~~f~C 60 (146)
+||-+.+....-.|
T Consensus 7 ygfcslpilknglc 20 (32)
T d1g1pa_ 7 YGFCSLPILKNGLC 20 (32)
T ss_dssp TSBCCCSSSSCCCB
T ss_pred ccceechhhcCCcc
Confidence 78876666554444
No 4
>d1rk8c_ b.72.3.1 (C:) Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=11.65 E-value=11 Score=20.16 Aligned_cols=19 Identities=32% Similarity=0.677 Sum_probs=13.7
Q ss_pred chhhhhhhccch---hhhhhcC
Q 032148 11 NTVVLAAQQRPQ---RRAKKLK 29 (146)
Q Consensus 11 ~~~~~~~~~~~~---~~~~~~~ 29 (146)
+-..|+|.|||. +|+.+||
T Consensus 7 ~G~~i~atqRpDGtWRK~rrvk 28 (33)
T d1rk8c_ 7 EGKFIPATKRPDGTWRKARRVK 28 (33)
T ss_dssp TEEEECCEECTTSCEECCEECC
T ss_pred CCcEeccccCCCCccccceecc
Confidence 345789999997 5666665
No 5
>d1f5ta2 a.76.1.1 (A:1065-1121) Diphtheria toxin repressor (DtxR) {Corynebacterium diphtheriae [TaxId: 1717]}
Probab=11.17 E-value=38 Score=19.22 Aligned_cols=17 Identities=24% Similarity=0.421 Sum_probs=13.6
Q ss_pred hHHhhCCCHHhhHHhhc
Q 032148 129 FLSLYGINKKKFNKEAC 145 (146)
Q Consensus 129 ~~~~~g~~~~~~~~~~~ 145 (146)
+.+.+|++.+..+.+||
T Consensus 22 L~~~lgv~~~~a~~~A~ 38 (57)
T d1f5ta2 22 LTDIIGLDINKVHDEAD 38 (57)
T ss_dssp HHTTSCCCGGGHHHHHH
T ss_pred HHHhhCCCHHHHHHHHH
Confidence 44568899999998888
No 6
>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.72 E-value=40 Score=18.40 Aligned_cols=11 Identities=18% Similarity=0.869 Sum_probs=9.2
Q ss_pred CCCCcccccch
Q 032148 116 PERPYFCRVEP 126 (146)
Q Consensus 116 e~RP~~CR~yP 126 (146)
+.||++|...+
T Consensus 3 ddkPF~C~~pG 13 (38)
T d1bhia_ 3 DDKPFLCTAPG 13 (38)
T ss_dssp TCCCEECCCTT
T ss_pred CCCceecCCCC
Confidence 57999998876
No 7
>d2isya2 a.76.1.1 (A:65-140) Iron-dependent regulator {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=10.36 E-value=54 Score=19.68 Aligned_cols=18 Identities=22% Similarity=0.612 Sum_probs=14.5
Q ss_pred hhHHhhCCCHHhhHHhhc
Q 032148 128 VFLSLYGINKKKFNKEAC 145 (146)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~ 145 (146)
++.+.+|++.+..+.+||
T Consensus 21 fL~~~lgv~~~~a~~~A~ 38 (76)
T d2isya2 21 LLVDVIGLPWEEVHAEAC 38 (76)
T ss_dssp HHHHTTCCCHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHH
Confidence 344678999999999998
No 8
>d2c42a5 d.58.1.5 (A:669-785) Pyruvate-ferredoxin oxidoreductase, PFOR, domain V {Desulfovibrio africanus [TaxId: 873]}
Probab=9.67 E-value=30 Score=21.92 Aligned_cols=10 Identities=50% Similarity=1.554 Sum_probs=7.9
Q ss_pred CCcchhhhhHh
Q 032148 57 LWRCVQGCGAC 67 (146)
Q Consensus 57 ~f~C~~gCG~C 67 (146)
...|. +||.|
T Consensus 74 ~~~C~-~CG~C 83 (117)
T d2c42a5 74 TLDCM-GCGNC 83 (117)
T ss_dssp TTTCC-CCCHH
T ss_pred cccCC-ccCch
Confidence 45695 99998
No 9
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.18 E-value=42 Score=17.09 Aligned_cols=12 Identities=42% Similarity=1.007 Sum_probs=9.4
Q ss_pred CCCcccccchhh
Q 032148 117 ERPYFCRVEPAV 128 (146)
Q Consensus 117 ~RP~~CR~yPf~ 128 (146)
.||+.|..-+|.
T Consensus 1 erpfkcqlcsy~ 12 (29)
T d2dmda3 1 ERPFKCQICPYA 12 (29)
T ss_dssp CCCEECSSSSCE
T ss_pred CCcceeeecccc
Confidence 489999987754
No 10
>d1iqza_ d.58.1.4 (A:) Ferredoxin {Bacillus thermoproteolyticus [TaxId: 1427]}
Probab=8.04 E-value=37 Score=20.32 Aligned_cols=15 Identities=33% Similarity=0.800 Sum_probs=10.4
Q ss_pred CCcchhhhhHhcCCCC
Q 032148 57 LWRCVQGCGACCKLDK 72 (146)
Q Consensus 57 ~f~C~~gCG~CC~~~~ 72 (146)
.-.|. +||.|=...+
T Consensus 8 ~~~Ci-gCg~C~~~cP 22 (81)
T d1iqza_ 8 KETCI-ACGACGAAAP 22 (81)
T ss_dssp TTTCC-CCSHHHHHCT
T ss_pred HHHCc-CcChHhHhCc
Confidence 35795 9999965443
Done!