BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032155
(146 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CRL|A Chain A, The Apo Form Of Hma Domain Of Copper Chaperone For
Superoxide Dismutase
Length = 98
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 25 TVEIKVKMDCDGCERRVKNAVNSMKGVKSVEVNRKQSRVTVSGYVEPNKVLKRVKSTGKR 84
T+E V+M C C V+ ++ + GV+ VEV+ + V V + +V ++ TG++
Sbjct: 20 TLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQ 79
Query: 85 A 85
A
Sbjct: 80 A 80
>pdb|2ROE|A Chain A, Solution Structure Of Thermus Thermophilus Hb8 Ttha1718
Protein In Vitro
pdb|2ROG|A Chain A, Solution Structure Of Thermus Thermophilus Hb8 Ttha1718
Protein In Living E. Coli Cells
Length = 66
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 32 MDCDGCERRVKNAVNSMKGVKSVEVNRKQSRVTVSGYVEPNKVLKRVKSTGKRAEFW 88
M C+ C V A+ + GV+ VEV+ ++ V G +P +++ V+ G +AE
Sbjct: 9 MTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL 65
>pdb|4A48|A Chain A, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
pdb|4A48|B Chain B, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
pdb|4A4J|A Chain A, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
Length = 69
Score = 34.3 bits (77), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 24 QTVEIKVK-MDCDGCERRVKNAVNSMKGVKSVEVN--RKQSRVTVSGYVEPNKVLKRVKS 80
QT+ ++++ MDC C ++ A+ + GV+S +VN +Q+ V+ G P + V+
Sbjct: 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVER 61
Query: 81 TGKRA 85
G A
Sbjct: 62 AGYHA 66
>pdb|1MWY|A Chain A, Solution Structure Of The N-Terminal Domain Of Znta In
The Apo-Form
pdb|1MWZ|A Chain A, Solution Structure Of The N-Terminal Domain Of Znta In
The Zn(Ii)-Form
Length = 73
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 32 MDCDGCERRVKNAVNSMKGVKSVEVNRKQSRVTVSGYVEPNKVLKRVKSTGKRAEF 87
MDC C R+V+NAV + GV V+V ++ V N + +V+S ++A +
Sbjct: 12 MDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDA---DNDIRAQVESALQKAGY 64
>pdb|1JK9|B Chain B, Heterodimer Between H48f-Ysod1 And Yccs
pdb|1JK9|D Chain D, Heterodimer Between H48f-Ysod1 And Yccs
Length = 249
Score = 32.3 bits (72), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 13/56 (23%), Positives = 31/56 (55%)
Query: 30 VKMDCDGCERRVKNAVNSMKGVKSVEVNRKQSRVTVSGYVEPNKVLKRVKSTGKRA 85
+ M C+ C +K + ++ G+ S+ + +Q ++V V P+ ++ +++ GK A
Sbjct: 13 IPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDA 68
>pdb|1FE4|A Chain A, Crystal Structure Of Mercury-Hah1
pdb|1FE4|B Chain B, Crystal Structure Of Mercury-Hah1
pdb|1FEE|A Chain A, Crystal Structure Of Copper-Hah1
pdb|1FEE|B Chain B, Crystal Structure Of Copper-Hah1
pdb|1FE0|A Chain A, Crystal Structure Of Cadmium-Hah1
pdb|1FE0|B Chain B, Crystal Structure Of Cadmium-Hah1
pdb|1TL4|A Chain A, Solution Structure Of Cu(i) Hah1
pdb|1TL5|A Chain A, Solution Structure Of Apohah1
pdb|2K1R|B Chain B, The Solution Nmr Structure Of The Complex Between Mnk1
And Hah1 Mediated By Cu(I)
pdb|3IWL|A Chain A, Crystal Structure Of Cisplatin Bound To A Human Copper
Chaperone (Monomer)
pdb|3IWX|A Chain A, Crystal Structure Of Cisplatin Bound To A Human Copper
Chaperone (Dimer)
pdb|3IWX|B Chain B, Crystal Structure Of Cisplatin Bound To A Human Copper
Chaperone (Dimer)
Length = 68
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 27 EIKVKMDCDGCERRVKNAVNSMKGVKSVEVNRKQSRVTVSGYVEPNKVLKRVKSTGKRAE 86
E V M C GC V +N + GVK +++ +V + + +L +K TGK
Sbjct: 5 EFSVDMTCGGCAEAVSRVLNKLGGVK-YDIDLPNKKVCIESEHSMDTLLATLKKTGKTVS 63
Query: 87 FW 88
+
Sbjct: 64 YL 65
>pdb|3CJK|A Chain A, Crystal Structure Of The Adduct Hah1-Cd(Ii)-Mnk1
Length = 68
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 27 EIKVKMDCDGCERRVKNAVNSMKGVKSVEVNRKQSRVTVSGYVEPNKVLKRVKSTGKRAE 86
E V M C GC V +N + GVK +++ +V + + +L +K TGK
Sbjct: 4 EFSVDMTCGGCAEAVSRVLNKLGGVK-YDIDLPNKKVCIESEHSMDTLLATLKKTGKTVS 62
Query: 87 FW 88
+
Sbjct: 63 YL 64
>pdb|2CG9|X Chain X, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
pdb|2CG9|Y Chain Y, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
Length = 134
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 17/96 (17%)
Query: 33 DCDGCERRVKNAVNSMKG-----VKSVEVNRKQSRVTVSGYVEPNKVLKRVKSTGKR--- 84
DCD E +K + +K V V+ Q + + + P K + +V + G+
Sbjct: 33 DCDAPELTIKPSYIELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMHKV-ANGQHYFL 91
Query: 85 --------AEFWPYIPQHLVHYPYAPGAYDKRAPAG 112
+E+WP + + V YPY +DK A
Sbjct: 92 KLYKKDLESEYWPRLTKEKVKYPYIKTDFDKWVDAD 127
>pdb|2XMW|A Chain A, Pacs, N-Terminal Domain, From Synechocystis Pcc6803
Length = 71
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 24 QTVEIKVK-MDCDGCERRVKNAVNSMKGVKSVEVN--RKQSRVTVSGYVEPNKVLKRVKS 80
QT+ ++++ M C C ++ A+ + GV+S +VN +Q+ V+ G P + V+
Sbjct: 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVER 62
Query: 81 TGKRA 85
G A
Sbjct: 63 AGYHA 67
>pdb|2OFH|X Chain X, Solution Structure Of The N-Terminal Domain Of The
Zinc(Ii) Atpase Ziaa In Its Apo Form
Length = 111
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 23 MQTVEIKVK-MDCDGCERRVKNAVNSMKGVKSVEVNRKQSRVTVS 66
++T +++V MDC C+ +++ ++ +KGV V R+TV+
Sbjct: 7 LKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVT 51
>pdb|2OFG|X Chain X, Solution Structure Of The N-Terminal Domain Of The
Zinc(Ii) Atpase Ziaa In Its Apo Form
Length = 111
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 23 MQTVEIKVK-MDCDGCERRVKNAVNSMKGVKSVEVNRKQSRVTVS 66
++T +++V MDC C+ +++ ++ +KGV V R+TV+
Sbjct: 2 LKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVT 46
>pdb|4A47|A Chain A, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
pdb|4A47|B Chain B, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
pdb|4A47|C Chain C, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
pdb|4A47|D Chain D, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
Length = 63
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 25 TVEIKV-KMDCDGCERRVKNAVNSMKGVKSVEVNRKQSRVTVSGYVEPNKVLKRVKSTGK 83
T+++ V MDC C V AV + +V+V+ +VT++ + ++ + S G
Sbjct: 1 TIQLTVPTMDCTSCAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGH 60
Query: 84 RAE 86
E
Sbjct: 61 EVE 63
>pdb|2GCF|A Chain A, Solution Structure Of The N-Terminal Domain Of The
Coppper(I) Atpase Pacs In Its Apo Form
Length = 73
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 24 QTVEIKVK-MDCDGCERRVKNAVNSMKGVKSVEVN--RKQSRVTVSGYVEPNKVLKRVKS 80
QT+ ++++ M C C ++ A+ + GV+S +VN +Q+ V+ G P + V+
Sbjct: 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVER 62
Query: 81 TGKRA 85
G A
Sbjct: 63 AGYHA 67
>pdb|2KT2|A Chain A, Structure Of Nmera, The N-Terminal Hma Domain Of Tn501
Mercuric Reductase
pdb|2KT3|A Chain A, Structure Of Hg-Nmera, Hg(Ii) Complex Of The N-Terminal
Domain Of Tn501 Mercuric Reductase
Length = 69
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 32 MDCDGCERRVKNAVNSMKGVKSVEVN--RKQSRVTVSGYVEPNKVLKRVKSTGKRAEF 87
M CD C VK A+ + GV+S V+ + +++ + P+ + V G +A
Sbjct: 9 MTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATL 66
>pdb|1OSD|A Chain A, Crystal Structure Of Oxidized Merp From Ralstonia
Metallidurans Ch34
pdb|1OSD|B Chain B, Crystal Structure Of Oxidized Merp From Ralstonia
Metallidurans Ch34
Length = 72
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 22 AMQTVEIKV-KMDCDGCERRVKNAVNSMKGVKSVEVNRKQSRVTVSGYVEPNKVLKRVKS 80
A QTV + V M C C VK A++ ++GV V+V + + V+ V K K+
Sbjct: 1 ATQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKA 60
Query: 81 TG 82
T
Sbjct: 61 TA 62
>pdb|3CQD|A Chain A, Structure Of The Tetrameric Inhibited Form Of
Phosphofructokinase-2 From Escherichia Coli
pdb|3CQD|B Chain B, Structure Of The Tetrameric Inhibited Form Of
Phosphofructokinase-2 From Escherichia Coli
pdb|3N1C|A Chain A, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Fructose-6-Phosphate
pdb|3N1C|B Chain B, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Fructose-6-Phosphate
pdb|3N1C|C Chain C, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Fructose-6-Phosphate
pdb|3N1C|D Chain D, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Fructose-6-Phosphate
pdb|3UMO|A Chain A, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Potassium
pdb|3UMO|B Chain B, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Potassium
pdb|3UMP|A Chain A, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Cesium And Atp
pdb|3UMP|B Chain B, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Cesium And Atp
pdb|3UQD|A Chain A, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Substrates And Products
pdb|3UQD|B Chain B, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Substrates And Products
pdb|3UQD|C Chain C, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Substrates And Products
pdb|3UQD|D Chain D, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Substrates And Products
Length = 309
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 96 VHYPYAPGAYDKRAPAGYVRNVVQAFPATNAPEDNLVSIFSDDNVNACSI 145
V P G RA A + FPA A ++LVS+ +D+NV ++
Sbjct: 34 VFEPGGGGINVARAIAHLGGSATAIFPAGGATGEHLVSLLADENVPVATV 83
>pdb|3UQE|A Chain A, Crystal Structure Of The Phosphofructokinase-2 Mutant Y23d
From Escherichia Coli
pdb|3UQE|B Chain B, Crystal Structure Of The Phosphofructokinase-2 Mutant Y23d
From Escherichia Coli
Length = 309
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 96 VHYPYAPGAYDKRAPAGYVRNVVQAFPATNAPEDNLVSIFSDDNVNACSI 145
V P G RA A + FPA A ++LVS+ +D+NV ++
Sbjct: 34 VFEPGGGGINVARAIAHLGGSATAIFPAGGATGEHLVSLLADENVPVATV 83
>pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial
P-Type Atpase Copper Transporter Copa
pdb|3J09|B Chain B, High Resolution Helical Reconstruction Of The Bacterial
P-Type Atpase Copper Transporter Copa
Length = 723
Score = 28.1 bits (61), Expect = 1.9, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 32 MDCDGCERRVKNAVNSMKGVKSVEVN 57
M C C + ++ AV S++GV+ V VN
Sbjct: 11 MTCAMCVKSIETAVGSLEGVEEVRVN 36
>pdb|3L2J|A Chain A, Dimeric Structure Of The Ligand-Free Extracellular Domain
Of Parathyroid Hormone Receptor (Pth1r)
pdb|3L2J|B Chain B, Dimeric Structure Of The Ligand-Free Extracellular Domain
Of Parathyroid Hormone Receptor (Pth1r)
Length = 535
Score = 27.7 bits (60), Expect = 2.1, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 37 CERRVKNAVN-------SMKGVKSVEVNRKQSRVTVSGYVEPNKVLKRVKSTGKRAEFWP 89
CE+R+K + S KG S + K + SG + P + TG R P
Sbjct: 390 CEKRLKEVLQRPASIMESDKGWTSASTSGKPRKDKASGKLYPESEEDKEAPTGSRYRGRP 449
Query: 90 YIPQ--HLVHYPY-APG 103
+P+ H++ +P APG
Sbjct: 450 CLPEWDHILCWPLGAPG 466
>pdb|3C4M|A Chain A, Structure Of Human Parathyroid Hormone In Complex With The
Extracellular Domain Of Its G-Protein-Coupled Receptor
(Pth1r)
pdb|3C4M|B Chain B, Structure Of Human Parathyroid Hormone In Complex With The
Extracellular Domain Of Its G-Protein-Coupled Receptor
(Pth1r)
pdb|3H3G|A Chain A, Crystal Structure Of The Extracellular Domain Of The Human
Parathyroid Hormone Receptor (Pth1r) In Complex With
Parathyroid Hormone-Related Protein (Pthrp)
Length = 539
Score = 27.7 bits (60), Expect = 2.1, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 37 CERRVKNAVN-------SMKGVKSVEVNRKQSRVTVSGYVEPNKVLKRVKSTGKRAEFWP 89
CE+R+K + S KG S + K + SG + P + TG R P
Sbjct: 394 CEKRLKEVLQRPASIMESDKGWTSASTSGKPRKDKASGKLYPESEEDKEAPTGSRYRGRP 453
Query: 90 YIPQ--HLVHYPY-APG 103
+P+ H++ +P APG
Sbjct: 454 CLPEWDHILCWPLGAPG 470
>pdb|1ESM|A Chain A, Structural Basis For The Feedback Regulation Of
Escherichia Coli Pantothenate Kinase By Coenzyme A
pdb|1ESM|B Chain B, Structural Basis For The Feedback Regulation Of
Escherichia Coli Pantothenate Kinase By Coenzyme A
pdb|1ESM|C Chain C, Structural Basis For The Feedback Regulation Of
Escherichia Coli Pantothenate Kinase By Coenzyme A
pdb|1ESM|D Chain D, Structural Basis For The Feedback Regulation Of
Escherichia Coli Pantothenate Kinase By Coenzyme A
pdb|1ESN|A Chain A, Structural Basis For The Feedback Regulation Of
Escherichia Coli Pantothenate Kinase By Coenzyme A
pdb|1ESN|B Chain B, Structural Basis For The Feedback Regulation Of
Escherichia Coli Pantothenate Kinase By Coenzyme A
pdb|1ESN|C Chain C, Structural Basis For The Feedback Regulation Of
Escherichia Coli Pantothenate Kinase By Coenzyme A
pdb|1ESN|D Chain D, Structural Basis For The Feedback Regulation Of
Escherichia Coli Pantothenate Kinase By Coenzyme A
Length = 316
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 15/71 (21%)
Query: 57 NRKQSRVTVSGYVEPNKVLKRVKSTGKRAEFWPYIPQHLVHYPYAPGAYDKRAPAGYVRN 116
+R+ +T G++ PN+VLK + K+ F P +YD +V +
Sbjct: 118 HRRVELITTDGFLHPNQVLKE-RGLXKKKGF--------------PESYDXHRLVKFVSD 162
Query: 117 VVQAFPATNAP 127
+ P AP
Sbjct: 163 LKSGVPNVTAP 173
>pdb|1AFI|A Chain A, Structure Of The Reduced Form Of Merp, The Periplasmic
Protein From The Bacterial Mercury Detoxification
System, Nmr, 20 Structures
pdb|1AFJ|A Chain A, Structure Of The Mercury-Bound Form Of Merp, The
Periplasmic Protein From The Bacterial Mercury
Detoxification System, Nmr, 20 Structures
pdb|2HQI|A Chain A, Nmr Solution Structure Of The Oxidized Form Of Merp, 14
Structures
Length = 72
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 22 AMQTVEIKV-KMDCDGCERRVKNAVNSMKGVKSVEVNRKQSRVTVS 66
A QTV + V M C C VK A++ ++GV V+V ++ V+
Sbjct: 1 ATQTVTLAVPGMTCAACPITVKKALSKVEGVSKVDVGFEKREAVVT 46
>pdb|3RFW|A Chain A, The Virulence Factor Peb4 And The Periplasmic Protein
Cj1289 Are Two Structurally-Related Sura-Like Chaperones
In The Human Pathogen Campylobacter Jejuni
Length = 252
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 29/55 (52%)
Query: 17 RSKRKAMQTVEIKVKMDCDGCERRVKNAVNSMKGVKSVEVNRKQSRVTVSGYVEP 71
++K K ++ ++ K E+ K+ +N +KG+K E++ K S + ++P
Sbjct: 102 QNKDKYVKPARVQAKHILVATEKEAKDIINELKGLKGKELDAKFSELAKEKSIDP 156
>pdb|2LDI|A Chain A, Nmr Solution Structure Of Ziaan Sub Mutant
Length = 71
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 23 MQTVEIKVK-MDCDGCERRVKNAVNSMKGVKSVEVNRKQSRVTVS 66
++T +++V M C C ++ A+ +KGV V R+TV+
Sbjct: 2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVT 46
>pdb|1SB6|A Chain A, Solution Structure Of A Cyanobacterial Copper
Metallochaperone, Scatx1
pdb|2XMT|A Chain A, Copper Chaperone Atx1 From Synechocystis Pcc6803 (Cu1
Form)
pdb|2XMT|B Chain B, Copper Chaperone Atx1 From Synechocystis Pcc6803 (Cu1
Form)
pdb|2XMU|A Chain A, Copper Chaperone Atx1 From Synechocystis Pcc6803 (Cu2
Form)
pdb|2XMU|B Chain B, Copper Chaperone Atx1 From Synechocystis Pcc6803 (Cu2
Form)
pdb|2XMJ|A Chain A, Visualising The Metal-Binding Versatility Of Copper
Trafficking Sites:atx1 Side-To-Side (Aerobic)
pdb|2XMJ|B Chain B, Visualising The Metal-Binding Versatility Of Copper
Trafficking Sites:atx1 Side-To-Side (Aerobic)
pdb|2XMK|A Chain A, Visualising The Metal-Binding Versatility Of Copper
Trafficking Sites: Atx1 Side-To-Side (Anaerobic)
pdb|2XMK|B Chain B, Visualising The Metal-Binding Versatility Of Copper
Trafficking Sites: Atx1 Side-To-Side (Anaerobic)
Length = 64
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 25 TVEIKV-KMDCDGCERRVKNAVNSMKGVKSVEVNRKQSRVTVSGYVEPNKVLKRVKSTGK 83
T+++ V + C+ C V AV + +V+V+ +VT++ + ++ + S G
Sbjct: 2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGH 61
Query: 84 RAE 86
E
Sbjct: 62 EVE 64
>pdb|4A46|A Chain A, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
pdb|4A46|B Chain B, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
pdb|4A46|C Chain C, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
pdb|4A46|D Chain D, Crosstalk Between Cu(I) And Zn(Ii) Homeostasis
Length = 63
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 25 TVEIKV-KMDCDGCERRVKNAVNSMKGVKSVEVNRKQSRVTVSGYVEPNKVLKRVKSTGK 83
T+++ V + C+ C V AV + +V+V+ +VT++ + ++ + S G
Sbjct: 1 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGH 60
Query: 84 RAE 86
E
Sbjct: 61 EVE 63
>pdb|2XMV|A Chain A, Copper Chaperone Atx1 From Synechocystis Pcc6803 (Cu1,
Trimeric Form, His61tyr Mutant)
pdb|2XMV|B Chain B, Copper Chaperone Atx1 From Synechocystis Pcc6803 (Cu1,
Trimeric Form, His61tyr Mutant)
pdb|2XMV|C Chain C, Copper Chaperone Atx1 From Synechocystis Pcc6803 (Cu1,
Trimeric Form, His61tyr Mutant)
pdb|2XMV|D Chain D, Copper Chaperone Atx1 From Synechocystis Pcc6803 (Cu1,
Trimeric Form, His61tyr Mutant)
pdb|2XMV|E Chain E, Copper Chaperone Atx1 From Synechocystis Pcc6803 (Cu1,
Trimeric Form, His61tyr Mutant)
pdb|2XMV|F Chain F, Copper Chaperone Atx1 From Synechocystis Pcc6803 (Cu1,
Trimeric Form, His61tyr Mutant)
pdb|2XMM|A Chain A, Visualising The Metal-Binding Versatility Of Copper
Trafficking Sites: H61y Atx1 Side-To-Side
pdb|2XMM|B Chain B, Visualising The Metal-Binding Versatility Of Copper
Trafficking Sites: H61y Atx1 Side-To-Side
Length = 64
Score = 25.8 bits (55), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 25 TVEIKV-KMDCDGCERRVKNAVNSMKGVKSVEVNRKQSRVTVSGYVEPNKVLKRVKSTGK 83
T+++ V + C+ C V AV + +V+V+ +VT++ + ++ + S G
Sbjct: 2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGY 61
Query: 84 RAE 86
E
Sbjct: 62 EVE 64
>pdb|2AJ0|A Chain A, Solution Structure Of Apocada
pdb|2AJ1|A Chain A, Solution Structure Of Apocada
Length = 71
Score = 25.8 bits (55), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 32 MDCDGCERRVKNAVNSMKGVKSVEVNRKQSRVTVSGYVEPNKV 74
+ C C + + V ++GV VN S++TV+G +V
Sbjct: 12 LSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEASIQQV 54
>pdb|2RML|A Chain A, Solution Structure Of The N-Terminal Soluble Domains Of
Bacillus Subtilis Copa
Length = 147
Score = 25.8 bits (55), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 32 MDCDGCERRVKNAVNSMKGVKSVEVNRKQSRVTV 65
M C C R++ +N ++GV + VN VTV
Sbjct: 83 MTCAACANRIEKRLNKIEGVANAPVNFALETVTV 116
>pdb|1P6T|A Chain A, Structure Characterization Of The Water Soluble Region Of
P- Type Atpase Copa From Bacillus Subtilis
Length = 151
Score = 25.8 bits (55), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 32 MDCDGCERRVKNAVNSMKGVKSVEVNRKQSRVTVS 66
M C C R++ +N ++GV + VN VTV
Sbjct: 83 MTCAACANRIEKRLNKIEGVANAPVNFALETVTVE 117
>pdb|2VOY|A Chain A, Cryoem Model Of Copa, The Copper Transporting Atpase
From Archaeoglobus Fulgidus
pdb|1JWW|A Chain A, Nmr Characterization Of The N-Terminal Domain Of A
Potential Copper-Translocating P-Type Atpase From
Bacillus Subtilis
Length = 80
Score = 25.8 bits (55), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 32 MDCDGCERRVKNAVNSMKGVKSVEVNRKQSRVTVS 66
M C C R++ +N ++GV + VN VTV
Sbjct: 12 MTCAACANRIEKRLNKIEGVANAPVNFALETVTVE 46
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.130 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,029,414
Number of Sequences: 62578
Number of extensions: 140926
Number of successful extensions: 463
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 429
Number of HSP's gapped (non-prelim): 39
length of query: 146
length of database: 14,973,337
effective HSP length: 90
effective length of query: 56
effective length of database: 9,341,317
effective search space: 523113752
effective search space used: 523113752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 46 (22.3 bits)