BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032156
MAAAAFASSSPVVGLGSSSLSSPKRTALGSSFVKSPVAARNPLRVAGACGGKVTCFERDW
LRTDLNVIGFGLIGWLAPSSIPAINGKSLTGLFFESIGTELAHFPTPPPLTSQFWLWLVT
WHFGLFLCLTFGQIGFKGRTEDYFSK

High Scoring Gene Products

Symbol, full name Information P value
PSAO
AT1G08380 		protein from Arabidopsis thaliana 2.6e-54

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032156
        (146 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2201836 - symbol:PSAO "AT1G08380" species:3702...   561  2.6e-54   1


>TAIR|locus:2201836 [details] [associations]
            symbol:PSAO "AT1G08380" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0009522 "photosystem I"
            evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009768
            "photosynthesis, light harvesting in photosystem I" evidence=IC]
            [GO:0009507 "chloroplast" evidence=IDA] [GO:0006098
            "pentose-phosphate shunt" evidence=RCA] [GO:0006364 "rRNA
            processing" evidence=RCA] [GO:0009657 "plastid organization"
            evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
            [GO:0019344 "cysteine biosynthetic process" evidence=RCA]
            [GO:0019684 "photosynthesis, light reaction" evidence=RCA]
            [GO:0030003 "cellular cation homeostasis" evidence=RCA] [GO:0035304
            "regulation of protein dephosphorylation" evidence=RCA] [GO:0070838
            "divalent metal ion transport" evidence=RCA] EMBL:CP002684
            GO:GO:0009507 GO:GO:0009522 GO:GO:0009768 UniGene:At.23691
            EMBL:AY050960 EMBL:AY091345 EMBL:AY087368 EMBL:AJ493060
            IPI:IPI00545431 RefSeq:NP_563815.1 STRING:Q949Q5 PRIDE:Q949Q5
            EnsemblPlants:AT1G08380.1 GeneID:837358 KEGG:ath:AT1G08380
            TAIR:At1g08380 InParanoid:Q949Q5 KO:K14332 OMA:PAINGNS
            PhylomeDB:Q949Q5 ProtClustDB:PLN00046
            BioCyc:MetaCyc:AT1G08380-MONOMER Genevestigator:Q949Q5
            InterPro:IPR017498 TIGRFAMs:TIGR03059 Uniprot:Q949Q5
        Length = 140

 Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
 Identities = 100/115 (86%), Positives = 109/115 (94%)

Query:    30 SSFVKSPVAARNPLRVAGACGGKVTCFERDWLRTDLNVIGFGLIGWLAPSSIPAINGKSL 89
             SSF+K  ++A+NPLR+AGA GG+VTCFER+WLR DLNV+GFGLIGWLAPSSIPAINGKSL
Sbjct:    26 SSFLKPTLSAKNPLRLAGASGGRVTCFERNWLRRDLNVVGFGLIGWLAPSSIPAINGKSL 85

Query:    90 TGLFFESIGTELAHFPTPPPLTSQFWLWLVTWHFGLFLCLTFGQIGFKGRTEDYF 144
             TGLFF+SIGTELAHFPTPP LTSQFWLWLVTWH GLFLCLTFGQIGFKGRTEDYF
Sbjct:    86 TGLFFDSIGTELAHFPTPPALTSQFWLWLVTWHLGLFLCLTFGQIGFKGRTEDYF 140


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.142   0.481    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      146       124   0.00091  102 3  11 22  0.47    30
                                                     29  0.39    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  146 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.28u 0.17s 13.45t   Elapsed:  00:00:01
  Total cpu time:  13.28u 0.17s 13.45t   Elapsed:  00:00:01
  Start:  Fri May 10 18:06:02 2013   End:  Fri May 10 18:06:03 2013

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