Query 032158
Match_columns 146
No_of_seqs 130 out of 1058
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 16:45:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032158.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032158hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1f7s_A Actin depolymerizing fa 100.0 1.6E-45 5.4E-50 261.5 16.5 139 8-146 1-139 (139)
2 2i2q_A Cofilin; N-terminal ser 100.0 2.1E-44 7.1E-49 255.1 15.6 135 10-146 1-135 (137)
3 1cfy_A Cofilin; actin-binding, 100.0 9E-44 3.1E-48 253.4 16.3 135 10-145 1-136 (143)
4 1cnu_A Actophorin, ADF, cofili 100.0 5.2E-43 1.8E-47 247.8 17.3 133 13-146 1-133 (137)
5 2kvk_A Actin severing and dyna 100.0 4.8E-43 1.6E-47 250.3 16.6 133 10-145 1-133 (144)
6 2xfa_A Actin depolymerization 100.0 2E-43 6.8E-48 253.1 12.7 134 11-146 6-145 (148)
7 1vkk_A GMF-gamma, GLIA maturat 100.0 9.7E-43 3.3E-47 251.2 15.8 136 8-145 13-150 (154)
8 2kd5_A ADF H, actin severing a 100.0 7E-43 2.4E-47 249.3 14.4 132 12-146 3-134 (144)
9 2lj8_A Cofilin/actin depolymer 100.0 7.2E-42 2.5E-46 244.1 16.8 133 9-145 8-140 (144)
10 1tvj_A Cofilin; ADF, actin bin 100.0 1.8E-41 6.3E-46 247.2 17.1 135 11-146 1-154 (166)
11 1v6f_A MGMF-beta, GLIA maturat 100.0 1.1E-40 3.8E-45 239.7 17.0 136 9-146 8-145 (151)
12 2w0i_A Twinfilin-2; cytoskelet 100.0 2.2E-40 7.4E-45 234.1 15.3 128 15-146 2-135 (135)
13 1ak6_A Destrin; actin depolyme 100.0 7.6E-42 2.6E-46 250.9 7.7 139 7-146 6-162 (174)
14 1m4j_A A6 gene product, twinfi 100.0 1.2E-40 4.1E-45 237.2 11.6 129 12-146 4-139 (142)
15 2d8b_A Twinfilin-1; cell-free 100.0 8.2E-40 2.8E-44 238.5 14.9 132 11-146 21-160 (166)
16 2vac_A Twinfilin-2; transferas 100.0 7.5E-40 2.6E-44 231.0 12.1 126 12-143 1-133 (134)
17 1hqz_1 ABP1P, actin-binding pr 100.0 8.7E-39 3E-43 227.2 14.2 127 12-145 3-135 (141)
18 3daw_B Twinfilin-1, protein A6 100.0 2.9E-38 9.9E-43 229.8 16.7 132 11-146 16-155 (164)
19 3q2b_A Pfadf1, cofilin/actin-d 100.0 4.6E-39 1.6E-43 224.4 6.7 117 10-138 2-122 (124)
20 2l72_A Tgadf, actin depolymeri 100.0 4.6E-38 1.6E-42 223.2 11.8 116 11-139 22-138 (139)
21 1x67_A Drebrin-like protein; c 100.0 4.6E-37 1.6E-41 219.7 14.9 130 11-145 4-139 (146)
22 1t3y_A Coactosin-like protein; 100.0 1E-33 3.5E-38 201.3 13.3 122 18-145 6-128 (141)
23 2vik_A Villin 14T; actin-bindi 58.9 37 0.0013 22.6 7.4 77 32-123 14-90 (126)
24 2raq_A Conserved protein MTH88 53.6 31 0.0011 22.1 5.0 59 19-78 22-80 (97)
25 2ff3_A Gelsolin; protein-prote 52.6 54 0.0018 22.5 8.3 86 23-124 28-113 (150)
26 3u42_A 50S ribosomal protein L 51.8 10 0.00034 28.1 2.8 35 4-44 135-169 (229)
27 3cip_G Gelsolin; actin, dictyo 51.1 51 0.0018 21.9 8.6 86 23-124 9-94 (128)
28 1t44_G Chimera of gelsolin dom 48.7 61 0.0021 22.1 8.4 85 23-123 6-90 (147)
29 3tu5_B Gelsolin, protein cordo 46.3 94 0.0032 23.8 7.7 85 23-123 24-108 (297)
30 2k5j_A Uncharacterized protein 46.0 13 0.00046 22.6 2.3 26 3-30 4-29 (80)
31 2p2e_A Putative Fe-S biosynthe 44.1 25 0.00086 23.4 3.7 28 14-42 4-31 (128)
32 2ay0_A Bifunctional PUTA prote 41.8 11 0.00038 21.5 1.4 24 8-31 1-24 (58)
33 3qoy_A 50S ribosomal protein L 41.1 22 0.00074 26.6 3.2 35 4-44 138-172 (242)
34 2x3d_A SSO6206; unknown functi 35.5 34 0.0011 21.9 3.0 58 20-78 22-79 (96)
35 3bpd_A Uncharacterized protein 33.2 19 0.00065 23.2 1.5 59 19-78 22-80 (100)
36 2ygw_A Malonyl-COA decarboxyla 33.0 20 0.0007 29.3 2.0 35 57-97 191-225 (460)
37 2wwq_5 50S ribosomal protein L 29.3 23 0.0008 26.2 1.7 35 4-44 134-168 (234)
38 2gpe_A Bifunctional protein PU 27.4 20 0.00068 19.5 0.8 24 8-31 1-24 (52)
39 1fmd_1 Foot-and-mouth disease 26.4 97 0.0033 22.5 4.6 30 71-106 68-97 (208)
40 3bbo_D Ribosomal protein L1; l 26.4 31 0.0011 27.3 2.0 55 4-66 248-302 (352)
41 3vbh_A EV71, genome polyprotei 25.1 94 0.0032 23.9 4.5 45 60-106 116-164 (297)
42 1qqp_1 FMDV, protein (genome p 24.5 61 0.0021 23.7 3.2 29 72-106 69-97 (213)
43 2ftc_A Mitochondrial ribosomal 24.5 1.5E+02 0.0052 20.8 5.3 31 8-44 96-126 (189)
44 4b9x_A TDRD1, tudor domain-con 24.1 2E+02 0.0067 20.5 6.6 40 14-53 140-179 (226)
45 1ncq_A Coat protein VP1; HRV, 23.3 1.1E+02 0.0036 23.4 4.5 34 73-106 120-161 (289)
46 1d4m_1 Protein (coxsackievirus 22.2 98 0.0033 23.8 4.1 14 93-106 142-155 (299)
47 4b9w_A TDRD1, tudor domain-con 21.1 2.2E+02 0.0074 19.8 6.6 39 14-52 140-178 (201)
48 2eo2_A Adult MALE hypothalamus 20.7 35 0.0012 20.6 1.0 15 129-143 43-57 (71)
No 1
>1f7s_A Actin depolymerizing factor (ADF); KINK in alpha-helix 3, plant protein; HET: LDA; 2.00A {Arabidopsis thaliana} SCOP: d.109.1.2
Probab=100.00 E-value=1.6e-45 Score=261.52 Aligned_cols=139 Identities=63% Similarity=1.116 Sum_probs=119.0
Q ss_pred CcccccCcccCHHHHHHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecCCCc
Q 032158 8 RPNATSGMGVADHSKNAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENC 87 (146)
Q Consensus 8 ~~~~~sGi~vs~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~~~~ 87 (146)
|+|++|||.+++||.++|++++.++.+|||+|+|+.++++|+|+++|++..+|++|.+.||+++|||++||+++++.+|+
T Consensus 1 ~~~~~sGi~v~~e~~~af~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~ 80 (139)
T 1f7s_A 1 MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENC 80 (139)
T ss_dssp ----CCCCEECHHHHHHHHHHHHHCCCSEEEEEEETTTTEEEEEEECCSSCCHHHHHTTSCTTSCEEEEEEEEEECTTSC
T ss_pred CCcCccCcEeCHHHHHHHHHHHcCCCcEEEEEEECCCCcEEEEEeecCCCCCHHHHHHhCCCCCceEEEEEeeeeccccC
Confidence 67889999999999999999998767999999999988899999988655699999999999999999999999999999
Q ss_pred eeecEEEEEEcCCCCChhhhhHhHHhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhhC
Q 032158 88 QKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 146 (146)
Q Consensus 88 ~~~k~vfI~w~P~~a~vk~kMlYsssk~~l~~~l~g~~~~i~a~d~~dl~~~~i~~k~~ 146 (146)
+++|++||+|||++||+|+||+||++|.+|++.|+|++++|||+|++||+++.|.+|++
T Consensus 81 ~~~k~vfI~w~P~~a~v~~KmlyAssk~~l~~~l~g~~v~i~a~d~~el~~~~i~~~~~ 139 (139)
T 1f7s_A 81 QKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRAN 139 (139)
T ss_dssp EEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCCEEEEECCTTC-----------
T ss_pred cccCEEEEEECCCCCChhHheehHHhHHHHHHhcCCeEEEEEECChHHCCHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999875
No 2
>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.1e-44 Score=255.05 Aligned_cols=135 Identities=42% Similarity=0.770 Sum_probs=115.4
Q ss_pred ccccCcccCHHHHHHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecCCCcee
Q 032158 10 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQK 89 (146)
Q Consensus 10 ~~~sGi~vs~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~~~~~~ 89 (146)
|++|||++++||.++|++|+.++.++||+|+|+.++++|+|++ +..+.+|++|.+.||+++|||++||+++++.+| .+
T Consensus 1 ~~~sGi~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~-~~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~-~~ 78 (137)
T 2i2q_A 1 MSFSGVKVSPECLEAFQELKLGKSLRYVVFKMNDTKTEIVVEK-KSTDKDFDTFLGDLPEKDCRYAIYDFEFNLGEG-VR 78 (137)
T ss_dssp -CCSCCEECHHHHHHHHHHHHTCCCSEEEEEECTTSSEEEEEE-EECCCCHHHHHHTSCSSSCEEEEEEEEECSSSS-CE
T ss_pred CCCCCcccCHHHHHHHHHHHCCCCceEEEEEECCCCcEEEEec-CCCCCCHHHHHHhCCCcCceEEEEEeeeecCCC-Cc
Confidence 5789999999999999999998779999999998888999987 445689999999999999999999999988877 88
Q ss_pred ecEEEEEEcCCCCChhhhhHhHHhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhhC
Q 032158 90 SKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 146 (146)
Q Consensus 90 ~k~vfI~w~P~~a~vk~kMlYsssk~~l~~~l~g~~~~i~a~d~~dl~~~~i~~k~~ 146 (146)
++++||+|||++||+|+||+|||+|++|++.|+|++++|||+|++||+++.|.++++
T Consensus 79 ~k~vfI~w~Pd~a~vk~KMlyassk~~l~~~l~g~~~~i~a~d~~el~~~~i~~kl~ 135 (137)
T 2i2q_A 79 NKIIFISWSPDVAPIKSKMVYSSSKDTLRRAFTGIGTDIQATDFSEVAYETVLEKVT 135 (137)
T ss_dssp EEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCCCCCEEEEECCCC------------
T ss_pred cCEEEEEECCCCCChhHhhhhHHHHHHHHHHhcCceEEEEECChHHcCHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999874
No 3
>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A
Probab=100.00 E-value=9e-44 Score=253.40 Aligned_cols=135 Identities=42% Similarity=0.784 Sum_probs=124.4
Q ss_pred ccccCcccCHHHHHHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecCCC-ce
Q 032158 10 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSEN-CQ 88 (146)
Q Consensus 10 ~~~sGi~vs~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~~~-~~ 88 (146)
|++|||.+++||.++|++|+.++.++||+|+|+.++++|+|+++|+ +.+|++|++.||+++|||++||+++++.+| +.
T Consensus 1 ~~~sGi~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~-~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~ 79 (143)
T 1cfy_A 1 MSRSGVAVADESLTAFNDLKLGKKYKFILFGLNDAKTEIVVKETST-DPSYDAFLEKLPENDCLYAIYDFEYEINGNEGK 79 (143)
T ss_dssp -----CEECHHHHHHHHHHHHHCCCSEEEEEECTTSSEEEEEEEEC-CCCHHHHHTTSCTTCCEEEEEEEEEECSSSCCE
T ss_pred CCcCCcEeCHHHHHHHHHHHCCCCeeEEEEEEcCCCCEEEEEecCC-CCCHHHHHHhCCCCCcEEEEEEeeeecCCCccc
Confidence 5689999999999999999998779999999998888999998875 579999999999999999999999998888 89
Q ss_pred eecEEEEEEcCCCCChhhhhHhHHhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhh
Q 032158 89 KSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 145 (146)
Q Consensus 89 ~~k~vfI~w~P~~a~vk~kMlYsssk~~l~~~l~g~~~~i~a~d~~dl~~~~i~~k~ 145 (146)
++|++||+|||++||+|+||+||++|.+|++.|+|++++|+++|++||+++.|.+++
T Consensus 80 ~~k~vfI~w~Pd~a~v~~KmlyAssk~~l~~~l~g~~~~i~a~d~~el~~~~i~~kl 136 (143)
T 1cfy_A 80 RSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVSTDVQGTDFSEVSYDSVLERV 136 (143)
T ss_dssp EEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTTCCEEEEESSGGGGSHHHHHHHH
T ss_pred ccCEEEEEECCCCCChhheeehHhhHHHHHHhcCCceEEEEeCChHHCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999986
No 4
>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A
Probab=100.00 E-value=5.2e-43 Score=247.75 Aligned_cols=133 Identities=44% Similarity=0.862 Sum_probs=125.7
Q ss_pred cCcccCHHHHHHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecCCCceeecE
Q 032158 13 SGMGVADHSKNAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKI 92 (146)
Q Consensus 13 sGi~vs~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~~~~~~~k~ 92 (146)
|||++++||.++|++|+.++.++||+|+|+.++++|+++.+|+++.+|++|.+.||+++|||++||+++++.+| .++++
T Consensus 1 SGi~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~-~~~k~ 79 (137)
T 1cnu_A 1 SGIAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCRYAIFDYEFQVDGG-QRNKI 79 (137)
T ss_dssp -CCEECHHHHHHHHHHHHHCCCSEEEEEECTTSSEEEEEEECCTTCCHHHHHTTSCTTSCEEEEEEEEEEETTE-EEEEE
T ss_pred CCCccCHHHHHHHHHHHcCCCccEEEEEEcCCCCEEEEEeccCCCCCHHHHHHhCCCCCceEEEEEeeeecCCC-CccCE
Confidence 79999999999999999987799999999998899999998866789999999999999999999999998877 88999
Q ss_pred EEEEEcCCCCChhhhhHhHHhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhhC
Q 032158 93 FFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 146 (146)
Q Consensus 93 vfI~w~P~~a~vk~kMlYsssk~~l~~~l~g~~~~i~a~d~~dl~~~~i~~k~~ 146 (146)
+||+|||++||+|+||+|||+|.+|++.|+|++++|||++++||+++.|.++++
T Consensus 80 vfI~w~Pd~a~v~~Kmlyassk~~l~~~l~g~~~~i~a~~~~el~~~~i~~kl~ 133 (137)
T 1cnu_A 80 TFILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQVEVQATDAAEISEDAVSERAK 133 (137)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHHHSTTCCEEEEECSTTTTSHHHHHHHHT
T ss_pred EEEEECCCCCChHHheehHHhHHHHHHHhcCceEEEEECChHHCCHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999874
No 5
>2kvk_A Actin severing and dynamics regulatory protein; ADF/cofilin, hormone; NMR {Leishmania donovani}
Probab=100.00 E-value=4.8e-43 Score=250.25 Aligned_cols=133 Identities=30% Similarity=0.568 Sum_probs=123.7
Q ss_pred ccccCcccCHHHHHHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecCCCcee
Q 032158 10 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQK 89 (146)
Q Consensus 10 ~~~sGi~vs~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~~~~~~ 89 (146)
|++|||.++++|.++|++|+.++ .|||+|+|+.++++|+++.+++++.+|++|.+.||+++|||++||+++++. ++.+
T Consensus 1 Ma~SGv~v~de~~~af~~lk~~k-~~~vi~~I~~~~~~i~v~~~~~~~~~~~e~~~~L~~~~prY~~y~~~~~~~-~~~~ 78 (144)
T 2kvk_A 1 MAISGVTLEESVRGAIDDLRMKK-SRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFSTEKPCYVAFDFEYNDA-GSKR 78 (144)
T ss_dssp CCCCCCEECHHHHHHHHHHHTTS-SSEEEEEECTTSCEEEEEEEECTTCCHHHHHHTCCTTSCCEEEEEEEEEET-TEEE
T ss_pred CCcCCcccCHHHHHHHHHHhcCC-ceEEEEEEeCCCcEEEEEeccCCCCCHHHHHHhCCccCceEEEEEeeeccC-CCCc
Confidence 66789999999999999999875 899999999998999999888777899999999999999999999999765 4578
Q ss_pred ecEEEEEEcCCCCChhhhhHhHHhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhh
Q 032158 90 SKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 145 (146)
Q Consensus 90 ~k~vfI~w~P~~a~vk~kMlYsssk~~l~~~l~g~~~~i~a~d~~dl~~~~i~~k~ 145 (146)
+|++||+|||++||+|+||+|||+|.+|++.|+| +++|||+|++||++++|.+|+
T Consensus 79 ~k~vfI~w~Pd~a~vk~KMlyassk~~lk~~l~~-~~~i~a~d~~el~~e~i~~kl 133 (144)
T 2kvk_A 79 EKLILIQWIPDTARPREKMMYSASRDALSSVSEG-YLPIQANDESGLDAEEIIRKV 133 (144)
T ss_dssp EEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTT-EEEEEESSGGGGCHHHHHHHH
T ss_pred ccEEEEEECCCCCCHHHHHHHHHHHHHHHHhcCC-EEEEEECChHHCCHHHHHHHH
Confidence 8999999999999999999999999999999987 579999999999999999886
No 6
>2xfa_A Actin depolymerization factor 2; actin binding protein, protein binding; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2e-43 Score=253.09 Aligned_cols=134 Identities=31% Similarity=0.542 Sum_probs=124.3
Q ss_pred cccCcccCHHHHHHHHHHHhcCcceEEEEEEeCCccEEEEe------eCCCCCCCHHHHHhcCCCCCceEEEEEeeeecC
Q 032158 11 ATSGMGVADHSKNAFTELQRKKVHRYVIFKIDEKKKEVVVE------KTGGPAESYEDFAAALPENDCRYAVYDFDYVTS 84 (146)
Q Consensus 11 ~~sGi~vs~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~------~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~ 84 (146)
++|||.+++||.++|++|+.++.+|||+|+| .++++|+++ .+|+++.+|++|++.||+++|||++||+++++.
T Consensus 6 m~sGi~v~~e~~~af~~~k~~k~~~~ii~~i-~~~~~i~v~~~~~~~~~g~~~~~~~~~~~~L~~~~prY~~y~~~~~~~ 84 (148)
T 2xfa_A 6 MVSGVNVSDECIYEFNRLKVKHLNKYIIYKI-ENLEKIVVDVLEHDMELTSLDNIIMRIKNNLKNTECRYIIADMPIPTP 84 (148)
T ss_dssp CCCCCEECHHHHHHHHHHHTSCCCSEEEEEE-ETTTEEEEEEEECCTTCCCHHHHHHHHHHTCBTTBCEEEEEEEEECCS
T ss_pred ccCCCeeCHHHHHHHHHHHCCCceEEEEEEE-CCCCEEEEEecccccccCCCCCCHHHHHHhCCcCCcEEEEEecccccC
Confidence 3689999999999999999987799999999 556889998 655434689999999999999999999999998
Q ss_pred CCceeecEEEEEEcCCCCChhhhhHhHHhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhhC
Q 032158 85 ENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 146 (146)
Q Consensus 85 ~~~~~~k~vfI~w~P~~a~vk~kMlYsssk~~l~~~l~g~~~~i~a~d~~dl~~~~i~~k~~ 146 (146)
+|+++++|+||+|||++|++|+||+|||+|++|++.|+|++++|||+| +||+++.|.++++
T Consensus 85 ~g~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~i~atd-~el~~~~i~~k~~ 145 (148)
T 2xfa_A 85 EGVLRDRIYFIFWSPGLSKPKEKMLYAASKESLVRKINGIFKSLEITC-DINEFEEELKAII 145 (148)
T ss_dssp SCCCEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCSEEEEECS-CGGGHHHHHHHHH
T ss_pred CCCcccCEEEEEECCCCCChHHHhHhHHHHHHHHHHhcCCeEEEEEEc-ccCCHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999 9999999999874
No 7
>1vkk_A GMF-gamma, GLIA maturation factor gamma; 15079298, structural GEN JCSG, protein structure initiative, PSI, joint center for S genomics; 1.35A {Mus musculus} SCOP: d.109.1.2 PDB: 1wfs_A 3l50_A
Probab=100.00 E-value=9.7e-43 Score=251.19 Aligned_cols=136 Identities=22% Similarity=0.346 Sum_probs=124.3
Q ss_pred CcccccCcccCHHHHHHHHHHHhcC--cceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecCC
Q 032158 8 RPNATSGMGVADHSKNAFTELQRKK--VHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSE 85 (146)
Q Consensus 8 ~~~~~sGi~vs~e~~~a~~~l~~~~--~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~~ 85 (146)
|+.+.+|++++++|.++|++|+.++ ..+||+|+|+.++++|+|+++++ +.+|++|.+.||+++|||++|||++++.+
T Consensus 13 ~~~~~~~~~v~~e~~~a~~~lk~~k~~~~~~iifkId~~~~~I~v~~~~~-~~~~~e~~~~Lp~~~pRY~vy~~~~~~~~ 91 (154)
T 1vkk_A 13 MSDSLVVCEVDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQ-NISPEELKLELPERQPRFVVYSYKYVHDD 91 (154)
T ss_dssp -----CCCEECHHHHHHHHHHHTCCCCSCEEEEEEEETTTTEEEEEEEEE-SCCHHHHHHHSCSSSCEEEEEECCEECTT
T ss_pred ccccccceeeCHHHHHHHHHHHhcccCCccEEEEEEcCCCCEEEEEEcCC-CCCHHHHHHhCCCCCcEEEEEEeeeccCC
Confidence 5666789999999999999999875 58999999999889999998654 57999999999999999999999999999
Q ss_pred CceeecEEEEEEcCCCCChhhhhHhHHhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhh
Q 032158 86 NCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 145 (146)
Q Consensus 86 ~~~~~k~vfI~w~P~~a~vk~kMlYsssk~~l~~~l~g~~~~i~a~d~~dl~~~~i~~k~ 145 (146)
|+.++|++||+|||++|++|+||+|||+|++|++.| |++++|||+|++||++++|.++|
T Consensus 92 g~~~~klvFI~w~P~~a~vk~KMlYAssk~~l~~~l-gi~~~iea~d~~El~~e~i~~kl 150 (154)
T 1vkk_A 92 GRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTA-ELTKVFEIRTTDDLTETWLKEKL 150 (154)
T ss_dssp SCEECCEEEEEECCTTSCHHHHHHHHHHHHHHHHHT-TCCCEEEESSGGGCCHHHHHHHH
T ss_pred CcccccEEEEEECCCCCChhhhhhhHhhHHHHHHhh-CceEEEEECChHhCCHHHHHHHH
Confidence 889999999999999999999999999999999999 89999999999999999999987
No 8
>2kd5_A ADF H, actin severing and dynamics regulatory protein; cofilin, solution structure, hormone; NMR {Leishmania donovani} PDB: 2kvk_A
Probab=100.00 E-value=7e-43 Score=249.33 Aligned_cols=132 Identities=30% Similarity=0.574 Sum_probs=124.6
Q ss_pred ccCcccCHHHHHHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecCCCceeec
Q 032158 12 TSGMGVADHSKNAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSK 91 (146)
Q Consensus 12 ~sGi~vs~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~~~~~~~k 91 (146)
+|||++++||.++|++++.++ ++|++|+|+.++++|+|+++|.++.+|++|.+.||+++|||++||+++++.+ +.++|
T Consensus 3 ~SGi~vs~e~~~a~~~~~~~~-~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~-~~~~k 80 (144)
T 2kd5_A 3 ISGVTLEESVRGAIDDLRMKK-SRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFSTEKPCYVAFDFEYNDAG-SKREK 80 (144)
T ss_dssp CCSCBCCHHHHHHHHHHTTTS-SSEEEEEECSSSCBEEEEEECCSCCCHHHHTTTTSCSSCEEEEEEEEEESSS-CEEEE
T ss_pred ccCCCcCHHHHHHHHHHHcCC-eeEEEEEECCCCCEEEEEeccCCCCCHHHHHHhCCccCcEEEEEEEEecCCC-CCccC
Confidence 389999999999999999987 9999999998888999999876678999999999999999999999998776 57899
Q ss_pred EEEEEEcCCCCChhhhhHhHHhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhhC
Q 032158 92 IFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 146 (146)
Q Consensus 92 ~vfI~w~P~~a~vk~kMlYsssk~~l~~~l~g~~~~i~a~d~~dl~~~~i~~k~~ 146 (146)
++||+|||++||+|+||+||++|.+|++.|+|+ ++||++|++||+++.|.++++
T Consensus 81 ~vfI~w~Pd~a~vk~KMlyAssk~~l~~~l~g~-~~i~a~d~~el~~~~i~~kl~ 134 (144)
T 2kd5_A 81 LILIQWIPDTARPREKMMYSASRDALSSVSEGY-LPIQANDESGLDAEEIIRKVR 134 (144)
T ss_dssp EEEEEECCCCSCSHHHHHHHHHGGGGTTTTCCS-EEEEESSSSSSSHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHhhhHHHHHHHHHHhCCe-EEEEECChHHCCHHHHHHHHh
Confidence 999999999999999999999999999999999 999999999999999999873
No 9
>2lj8_A Cofilin/actin depolymerizing factor, putative; protein binding; NMR {Trypanosoma brucei}
Probab=100.00 E-value=7.2e-42 Score=244.15 Aligned_cols=133 Identities=35% Similarity=0.653 Sum_probs=120.3
Q ss_pred cccccCcccCHHHHHHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecCCCce
Q 032158 9 PNATSGMGVADHSKNAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQ 88 (146)
Q Consensus 9 ~~~~sGi~vs~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~~~~~ 88 (146)
.|++|||++++||.++|++|+.++ .+|++|+|+++ ++++++..+..+.+|++|++.||+++|||++|++.+.+.++ .
T Consensus 8 ~Ma~SGi~vsde~~~af~~lk~~k-~~~ii~~i~d~-~~~vv~~~~~~~~~~de~~~~L~~~~prY~~y~~~~~~~~~-~ 84 (144)
T 2lj8_A 8 HMAMSGVSVADECVTALNDLRHKK-SRYVIMHIVDQ-KSIAVKTIGERGANFDQFIEAIDKNVPCYAAFDFEYTTNDG-P 84 (144)
T ss_dssp -CCCSSCEECHHHHHHHHHHTTTS-SSEEEEEEETT-TEEEEEEECSSCCCHHHHHHHCCSSSCEEEEEEEEECSSSS-S
T ss_pred ccccCCceeCHHHHHHHHHHhcCC-ceEEEEEEECC-cEEEEEecCCCCCCHHHHHHhCcccCCcceeeeeeeccCCC-C
Confidence 577789999999999999999875 89999999976 45666666666789999999999999999999999987665 5
Q ss_pred eecEEEEEEcCCCCChhhhhHhHHhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhh
Q 032158 89 KSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 145 (146)
Q Consensus 89 ~~k~vfI~w~P~~a~vk~kMlYsssk~~l~~~l~g~~~~i~a~d~~dl~~~~i~~k~ 145 (146)
+++|+||+|||++||+|+||+|||+|++|++.|+|++ +|||+|++||++++|.++|
T Consensus 85 ~~k~vfI~w~Pd~a~vk~KMlYASsk~~l~~~l~~~~-~i~a~d~~el~~e~i~~kl 140 (144)
T 2lj8_A 85 RDKLILISWNPDSGAPRTKMLYSSSRDALVPLTQGFQ-GIQANDASGLDFEEISRKV 140 (144)
T ss_dssp EEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTTTSE-EEECCGGGTSCHHHHHHHH
T ss_pred cccEEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCee-EEEeCChHHCCHHHHHHHH
Confidence 7899999999999999999999999999999999886 8999999999999999987
No 10
>1tvj_A Cofilin; ADF, actin binding protein, actin depolymerizing factor, actin-binding protein; NMR {Gallus gallus}
Probab=100.00 E-value=1.8e-41 Score=247.22 Aligned_cols=135 Identities=34% Similarity=0.687 Sum_probs=124.2
Q ss_pred cccCcccCHHHHHHHHHHHhcC---------cceEEEEEEeCCccEEEEee--------CCCC-CCCHHHHHhcCCCCCc
Q 032158 11 ATSGMGVADHSKNAFTELQRKK---------VHRYVIFKIDEKKKEVVVEK--------TGGP-AESYEDFAAALPENDC 72 (146)
Q Consensus 11 ~~sGi~vs~e~~~a~~~l~~~~---------~~~~vi~~i~~~~~~i~l~~--------~~~~-~~~~~e~~~~L~~~~p 72 (146)
++|||.+++||.++|++|+.++ .++||+|+|+.++.+|++++ .+++ +.+|++|++.||+++|
T Consensus 1 m~SGi~vs~e~~~~f~~~k~~k~~~~~~~~~~~~~iifki~~~~~~iivee~~~~~~~~~~~~~~~~~~ef~~~L~~~~p 80 (166)
T 1tvj_A 1 MASGVTVNDEVIKVFNDMKVRKSSTPEEIKKRKKAVLFCLSDDKKQIIVEEAKQILVGDIGDTVEDPYTAFVKLLPLNDC 80 (166)
T ss_dssp CCCCCEECHHHHHHHHHHHSCCCSCHHHHTTCEEEEEEEECTTSSEEEEEEEEEEETTTBTTTBSCHHHHHHHHCCTTSC
T ss_pred CCCCCeeCHHHHHHHHHHhcCCCccccccccceeEEEEEECCCCcEEEEeccccccccccCccccCCHHHHHHhCCCCCc
Confidence 4689999999999999999886 48899999999888899886 3432 5789999999999999
Q ss_pred eEEEEEeeeecCCCceeecEEEEEEcCCCCChhhhhHhHHhHHHHHHhcCCeeEEEEeCCcCCC-CHHHHHhhhC
Q 032158 73 RYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEM-DLEELRNRAN 146 (146)
Q Consensus 73 ry~~~~~~~~~~~~~~~~k~vfI~w~P~~a~vk~kMlYsssk~~l~~~l~g~~~~i~a~d~~dl-~~~~i~~k~~ 146 (146)
||++||+++++.++ .+++|+||+|||++|++|+||+|||+|++|++.|+|++++|||+|++|| ++++|.++|.
T Consensus 81 rY~vy~~~~~~~~~-~~~klvfI~W~Pd~a~vr~KMlYAssk~~lk~~l~gi~~~i~atd~~el~~~~~i~ekl~ 154 (166)
T 1tvj_A 81 RYALYDATYETKES-KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKHEWQVNGLDDIKDRSTLGEKLG 154 (166)
T ss_dssp EEEEEEEEEEESSC-EEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHTTTTCCCEEEESSGGGTCCHHHHHHHHT
T ss_pred EEEEEeccccCCCC-CccCEEEEEECCCCCCHHHhhHHHHhHHHHHHHhcCCeEEEEECChHHcCCHHHHHHHhC
Confidence 99999999988775 8999999999999999999999999999999999999999999999999 9999999874
No 11
>1v6f_A MGMF-beta, GLIA maturation factor, beta; actin binding protein, cytoskeleton, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.109.1.2
Probab=100.00 E-value=1.1e-40 Score=239.71 Aligned_cols=136 Identities=21% Similarity=0.355 Sum_probs=124.9
Q ss_pred cccccCcccCHHHHHHHHHHHhcC--cceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecCCC
Q 032158 9 PNATSGMGVADHSKNAFTELQRKK--VHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSEN 86 (146)
Q Consensus 9 ~~~~sGi~vs~e~~~a~~~l~~~~--~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~~~ 86 (146)
+.....++++++|.++|++|+.++ .++||+|+|+.++++|+|+++++ +.++++|.+.||+++|||++||+++++.+|
T Consensus 8 ~~~~~~~~v~~e~~~a~~~lr~~k~~~~~~iifki~~~~~~I~v~~~~~-~~~~~el~~~Lp~~~prY~~~~~~~~~~~~ 86 (151)
T 1v6f_A 8 SESLVVCDVAEDLVEKLRKFRFRKETHNAAIIMKIDKDERLVVLDEELE-GVSPDELKDELPERQPRFIVYSYKYQHDDG 86 (151)
T ss_dssp CCCCCCCEECHHHHHHHHHHHTCCCSSCEEEEEEECSSSCEEEEEEEEE-SCCHHHHGGGSCSSSCEEEEEECCEECTTS
T ss_pred CCCceEEEECHHHHHHHHHHHhccCCCccEEEEEEcCCCcEEEEEecCC-CCCHHHHHhhCCCCCceEEEEecccccCCC
Confidence 344445789999999999999875 58999999999888999998764 578999999999999999999999999888
Q ss_pred ceeecEEEEEEcCCCCChhhhhHhHHhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhhC
Q 032158 87 CQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 146 (146)
Q Consensus 87 ~~~~k~vfI~w~P~~a~vk~kMlYsssk~~l~~~l~g~~~~i~a~d~~dl~~~~i~~k~~ 146 (146)
+.++|++||+|||++|++|+||+||++|.+|++.| |++++|||+|++||++++|.++++
T Consensus 87 ~~~~k~vfI~w~P~~a~vk~KMlYAssk~~l~~~l-gi~~~iea~d~~El~~~~i~~kl~ 145 (151)
T 1v6f_A 87 RVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLVQTA-ELTKVFEIRNTEDLTEEWLREKLG 145 (151)
T ss_dssp CEECCEEEEEECCTTSCHHHHHHHHHHHHHHHHHT-TCSEEEEESSGGGCCHHHHHHHHH
T ss_pred cccccEEEEEECCCCCChHHheehHHHHHHHHHHh-CCeEEEEECChHHCCHHHHHHHHc
Confidence 88999999999999999999999999999999999 899999999999999999999873
No 12
>2w0i_A Twinfilin-2; cytoskeleton, actin-binding, actin binding, cofilin-like, phosphoprotein, phosphorylation, transferase, protein tyros kinase-9; 1.8A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=234.09 Aligned_cols=128 Identities=20% Similarity=0.405 Sum_probs=120.6
Q ss_pred cccCHHHHHHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecCCCceeecEEE
Q 032158 15 MGVADHSKNAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFF 94 (146)
Q Consensus 15 i~vs~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~~~~~~~k~vf 94 (146)
++|+++|.++|++|+.++ ++||+|+|+.++++|+|++++ +.++++|.+.||+++|||++||+++++.++ .++|++|
T Consensus 2 ~~v~~e~~~a~~~lk~~~-~~~ii~~id~~~~~I~v~~~~--~~~~~el~~~Lp~~~~rY~~y~~~~~~~~~-~~~k~vf 77 (135)
T 2w0i_A 2 MPLQPEAQRALQQLKQKM-VNYIQMKLDLERETIELVHTE--PTDVAQLPSRVPRDAARYHFFLYKHTHEGD-PLESVVF 77 (135)
T ss_dssp CCBCHHHHHHHHHHHTTS-CSEEEEEEETTTTEEEEEECC--CCCGGGGGGGSCSSSCEEEEEEEEEEETTE-EEEEEEE
T ss_pred cccCHHHHHHHHHHHcCC-CcEEEEEEeCCCCEEEEEecC--CCCHHHHHhhCCCCCcEEEEEecccccCCC-CCccEEE
Confidence 679999999999999986 999999999988999999886 689999999999999999999999987765 8999999
Q ss_pred EEEcCC-CCChhhhhHhHHhHHHHHHhcC---Cee--EEEEeCCcCCCCHHHHHhhhC
Q 032158 95 IAWSPS-TSRIRAKMLYATSKDRFRRELD---GIH--YEIQATDPTEMDLEELRNRAN 146 (146)
Q Consensus 95 I~w~P~-~a~vk~kMlYsssk~~l~~~l~---g~~--~~i~a~d~~dl~~~~i~~k~~ 146 (146)
|+|||+ +|++|+||+|||+|..|++.|+ |++ ++|||+|++||++++|.++++
T Consensus 78 I~w~P~~~~~vk~kMlYassk~~l~~~l~~~~Gi~v~~~iea~d~~el~~~~i~~kl~ 135 (135)
T 2w0i_A 78 IYSMPGYKCSIKERMLYSSCKSRLLDSVEQDFHLEIAKKIEIGDGAELTAEFLDDEVH 135 (135)
T ss_dssp EEECCGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCGGGCCHHHHHHHHC
T ss_pred EEECCCCCCCHHHHhHhHHhHHHHHHHHhhccCCceeEEEEcCChhhcCHHHHHHhhC
Confidence 999999 9999999999999999999998 876 899999999999999999985
No 13
>1ak6_A Destrin; actin depolymerization factor, actin-binding protein; NMR {Homo sapiens} SCOP: d.109.1.2 PDB: 1ak7_A 1q8g_A 1q8x_A 3j0s_M
Probab=100.00 E-value=7.6e-42 Score=250.93 Aligned_cols=139 Identities=34% Similarity=0.671 Sum_probs=125.3
Q ss_pred CCcccccCcccCHHHHHHHHHHHhcC---------cceEEEEEEeCCccEEEEeeC--------CCC-CCCHHHHHhcCC
Q 032158 7 SRPNATSGMGVADHSKNAFTELQRKK---------VHRYVIFKIDEKKKEVVVEKT--------GGP-AESYEDFAAALP 68 (146)
Q Consensus 7 ~~~~~~sGi~vs~e~~~a~~~l~~~~---------~~~~vi~~i~~~~~~i~l~~~--------~~~-~~~~~e~~~~L~ 68 (146)
++++++|||.+++||.++|++++.++ .+|||+|+|+.++++|++++. |++ ..+|++|++.||
T Consensus 6 ~~m~m~SGi~vs~e~~~~f~~~k~~ks~~~~~~~~~~~~iifki~~~~~~Iivee~~~~~~~~~g~~~~~~~~ef~~~L~ 85 (174)
T 1ak6_A 6 SSGNSASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDVGVTITDPFKHFVGMLP 85 (174)
T ss_dssp CCSTTTTCCCCCSHHHHHHHHTSSSCCSSHHHHGGGCCCEECCCSTTSCSCCCCSSCCCCSSSTTTTCCSSSHHHHHTSC
T ss_pred CcccccCCCccCHHHHHHHHHHHcCCcccccccccceeEEEEEECCCCcEEEEeccccccccccCcccCCCHHHHHHhCC
Confidence 44556789999999999999999884 588999999988778888763 322 578999999999
Q ss_pred CCCceEEEEEeeeecCCCceeecEEEEEEcCCCCChhhhhHhHHhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhhC
Q 032158 69 ENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 146 (146)
Q Consensus 69 ~~~pry~~~~~~~~~~~~~~~~k~vfI~w~P~~a~vk~kMlYsssk~~l~~~l~g~~~~i~a~d~~dl~~~~i~~k~~ 146 (146)
+++|||++||+++.+.+| ++++|+||+|||++|++|+||+|||+|++|++.|+|++++|||+|++||++++|.++|.
T Consensus 86 ~~~prY~ly~~~~~~~~~-~~~klvfI~W~Pd~a~vk~KMlYAssk~~lk~~l~gi~~~i~atd~~El~~e~i~~kl~ 162 (174)
T 1ak6_A 86 EKDCRYALYDASFETKES-RKEELMFFLWAPELAPLKSKMIYASSKDAIKKKFQGIKHECQANGPEDLNRACIAEKLG 162 (174)
T ss_dssp SSCCCCEECCCCCCCSSC-SCCCCCEEEECCSSSCHHHHHSHHHHHHHHHHHCTTCSCCEEESSTTTTCHHHHHHHTT
T ss_pred CCCcEEEEEeCcccCCCC-ccccEEEEEECCCCCCHHHhhHHHHHHHHHHHHhcCCeEEEEECChhhcCHHHHHHHhc
Confidence 999999999999887775 88999999999999999999999999999999999999999999999999999999874
No 14
>1m4j_A A6 gene product, twinfilin; mixed beta-sheet, PAIR of alpha-helices, structural protein; 1.60A {Mus musculus} SCOP: d.109.1.2
Probab=100.00 E-value=1.2e-40 Score=237.20 Aligned_cols=129 Identities=26% Similarity=0.518 Sum_probs=114.7
Q ss_pred ccCcccCHHHHHHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCC----CCHHHHHhcC-CCCCceEEEEEeeeecCCC
Q 032158 12 TSGMGVADHSKNAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPA----ESYEDFAAAL-PENDCRYAVYDFDYVTSEN 86 (146)
Q Consensus 12 ~sGi~vs~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~----~~~~e~~~~L-~~~~pry~~~~~~~~~~~~ 86 (146)
+|||.+++||.++|++++.++ +||++|+|+++ +|+++.+|+.. .+|++|++.| |+++|||++||+++++.+
T Consensus 4 ~SGi~v~~e~~~~f~~~k~~k-~~~ii~~i~~~--~ivv~~~~~~~~~~~~~~~e~~~~l~~~~~~rY~~~~~~~~~~~- 79 (142)
T 1m4j_A 4 QTGIQASEDVKEIFARARNGK-YRLLKISIENE--QLVVGSCSPPSDSWEQDYDSFVLPLLEDKQPCYVLFRLDSQNAQ- 79 (142)
T ss_dssp ---CCBCHHHHHHHHHHHTTT-CSEEEEEECSS--SEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEETT-
T ss_pred cCCCeECHHHHHHHHHHhcCC-eEEEEEEEcCC--EEEEEeecCCCccccccHHHHHHhhCCCCCceEEEEEcCcCCCC-
Confidence 689999999999999999987 99999999764 79998877544 3478999887 799999999999988764
Q ss_pred ceeecEEEEEEcCCCCChhhhhHhHHhHHHHHHhcCCeeE--EEEeCCcCCCCHHHHHhhhC
Q 032158 87 CQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHY--EIQATDPTEMDLEELRNRAN 146 (146)
Q Consensus 87 ~~~~k~vfI~w~P~~a~vk~kMlYsssk~~l~~~l~g~~~--~i~a~d~~dl~~~~i~~k~~ 146 (146)
++||+||+|||++||+|+||+|||+|++|++.|+|+++ +|||+|++||+++++.++++
T Consensus 80 --~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~~~i~atd~~el~~~~i~~~l~ 139 (142)
T 1m4j_A 80 --GYEWIFIAWSPDHSHVRQKMLYAATRATLKKEFGGGHIKDEVFGTVKEDVSLHGYKKYLL 139 (142)
T ss_dssp --EEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGEEEEEEESSHHHHSHHHHHHHHC
T ss_pred --CceEEEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCceeEEEEEeCChHHCCHHHHHHHHh
Confidence 59999999999999999999999999999999999887 99999999999999999874
No 15
>2d8b_A Twinfilin-1; cell-free protein synthesis, actin-binding protein, developmental regulation, cellular remodeling, cytoskeleton, morphology; NMR {Mus musculus}
Probab=100.00 E-value=8.2e-40 Score=238.49 Aligned_cols=132 Identities=20% Similarity=0.402 Sum_probs=123.5
Q ss_pred cccCcc--cCHHHHHHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecCCCce
Q 032158 11 ATSGMG--VADHSKNAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQ 88 (146)
Q Consensus 11 ~~sGi~--vs~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~~~~~ 88 (146)
++||+. ++++|.++|++|+.+ .++||+|+|+.++++|+|++++ +.++++|.+.||+++|||+||||++++.++ .
T Consensus 21 ~~sgv~~~v~~e~~~a~~~lk~~-~~~~vifkId~~~~~I~v~~~~--~~~~~el~~~Lp~~~pRY~~y~~~~~~~~~-~ 96 (166)
T 2d8b_A 21 TLQGVAFPISRDAFQALEKLSKK-QLNYVQLEIDIKNETIILANTE--NTELRDLPKRIPKDSARYHFFLYKHSHEGD-Y 96 (166)
T ss_dssp CSCCCCCCBCHHHHHHHHHHHTT-CCSCCEEEEETTTTEEEEEECC--CCCSTTHHHHSCSSCCEEEEEEEEEEETTE-E
T ss_pred ccCCcccCcCHHHHHHHHHHHcC-CCcEEEEEEeCCCCEEEEEecC--CCCHHHHHHhCCCCCceEEEEeccccCCCC-c
Confidence 347998 999999999999998 6999999999988999999886 579999999999999999999999988776 6
Q ss_pred eecEEEEEEcCC-CCChhhhhHhHHhHHHHHHhcC---Ce--eEEEEeCCcCCCCHHHHHhhhC
Q 032158 89 KSKIFFIAWSPS-TSRIRAKMLYATSKDRFRRELD---GI--HYEIQATDPTEMDLEELRNRAN 146 (146)
Q Consensus 89 ~~k~vfI~w~P~-~a~vk~kMlYsssk~~l~~~l~---g~--~~~i~a~d~~dl~~~~i~~k~~ 146 (146)
++|++||+|||+ +|++|+||+||++|..|++.|. |+ +++|||+|++||+++.|.++++
T Consensus 97 ~~k~vFI~w~P~~~~~ik~KMlYAssk~~l~~~l~~~~Gi~v~~~iea~d~~El~~~~i~~kl~ 160 (166)
T 2d8b_A 97 LESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIEIDNGDELTADFLYDEVH 160 (166)
T ss_dssp EEEEEEEEECCCSSSCHHHHHHHHHTTHHHHHHHTTSSCCCCSEEEEESSSTTCCHHHHHHHHH
T ss_pred cccEEEEEECCCCCCCHHHeeehhhhHHHHHHHHhhccCCceeEEEEeCChHHCCHHHHHHHhC
Confidence 999999999999 9999999999999999999999 87 8999999999999999999873
No 16
>2vac_A Twinfilin-2; transferase, actin binding, phosphorylation, cofilin-like, cytoskeleton, actin-binding, protein tyrosine kinase-9; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.5e-40 Score=231.01 Aligned_cols=126 Identities=23% Similarity=0.465 Sum_probs=114.6
Q ss_pred ccCcccCHHHHHHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCC----CHHHHHhcC-CCCCceEEEEEeeeecCCC
Q 032158 12 TSGMGVADHSKNAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAE----SYEDFAAAL-PENDCRYAVYDFDYVTSEN 86 (146)
Q Consensus 12 ~sGi~vs~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~----~~~e~~~~L-~~~~pry~~~~~~~~~~~~ 86 (146)
+|||.+++||.++|++|+.++ +|||+|+|+++ +|+++++|+... +|++|++.| |+++|||++||+++++.+
T Consensus 1 ~SGi~v~~e~~~~f~~~k~~k-~r~ii~~i~~~--~ivv~~~~~~~~~~~~~~~~~~~~l~~~~~prY~v~~~~~~~~~- 76 (134)
T 2vac_A 1 SMGIHATEELKEFFAKARAGS-VRLIKVVIEDE--QLVLGASQEPVGRWDQDYDRAVLPLLDAQQPCYLLYRLDSQNAQ- 76 (134)
T ss_dssp CCSCEECHHHHHHHHHHHHSS-CSEEEEEEETT--EEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEETT-
T ss_pred CCCcEeCHHHHHHHHHHhcCC-eEEEEEEecCC--EEEEEeecCcCcccccCHHHHHHhcCCCCCCEEEEEECCcCCCC-
Confidence 589999999999999999987 99999999874 899988875442 478999998 699999999999998764
Q ss_pred ceeecEEEEEEcCCCCChhhhhHhHHhHHHHHHhcCCeeE--EEEeCCcCCCCHHHHHh
Q 032158 87 CQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHY--EIQATDPTEMDLEELRN 143 (146)
Q Consensus 87 ~~~~k~vfI~w~P~~a~vk~kMlYsssk~~l~~~l~g~~~--~i~a~d~~dl~~~~i~~ 143 (146)
++||+||+|||++||+|+||+|||+|++|++.|+|+++ +|||+|++||+++.++.
T Consensus 77 --~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~~~i~atd~~el~~~~~~~ 133 (134)
T 2vac_A 77 --GFEWLFLAWSPDNSPVRLKMLYAATRATVKKEFGGGHIKDELFGTVKDDLSFAGYQK 133 (134)
T ss_dssp --EEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGEEEEEEESSHHHHSHHHHHH
T ss_pred --CceEEEEEEcCCCCCHHHHhHHHHHHHHHHHHcCCCeeeEEEEeCChHHcCHHHHhc
Confidence 48999999999999999999999999999999999887 99999999999999875
No 17
>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2
Probab=100.00 E-value=8.7e-39 Score=227.20 Aligned_cols=127 Identities=20% Similarity=0.394 Sum_probs=116.2
Q ss_pred ccCccc---CHHHHHHHHHHHhcC--cceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecCCC
Q 032158 12 TSGMGV---ADHSKNAFTELQRKK--VHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSEN 86 (146)
Q Consensus 12 ~sGi~v---s~e~~~a~~~l~~~~--~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~~~ 86 (146)
++|+.+ +++|.++|++++.++ .++||+|+|+. +++|+|+.+|+ +|++|.+.||+++|||++||++ .+|
T Consensus 3 m~~i~l~~~~~e~~~a~~~~~~~~~~~~~~ii~~i~~-~~~i~v~~~g~---~~~el~~~l~~~~~rY~~~~~~---~~~ 75 (141)
T 1hqz_1 3 LEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNA-KKEYEPESTGS---SFHDFLQLFDETKVQYGLARVS---PPG 75 (141)
T ss_dssp CCCCCCSTTHHHHHHHHHHHHHTCCTTCCEEEEEECT-TSCEEEEEEES---CHHHHHTCCCTTSCEEEEEEEC---CTT
T ss_pred ccccccCCCCHHHHHHHHHHHhCCCCCceEEEEEEcC-CCEEEEEeecC---CHHHHHhhCCCCceEEEEEEEe---cCC
Confidence 346766 499999999999885 69999999998 56899998873 8999999999999999999998 446
Q ss_pred ceeecEEEEEEcCCCCChhhhhHhHHhHHHHHH-hcCCeeEEEEeCCcCCCCHHHHHhhh
Q 032158 87 CQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRR-ELDGIHYEIQATDPTEMDLEELRNRA 145 (146)
Q Consensus 87 ~~~~k~vfI~w~P~~a~vk~kMlYsssk~~l~~-~l~g~~~~i~a~d~~dl~~~~i~~k~ 145 (146)
+.++|+|||+|||++||+|+||+|||+|.+|++ .|+|++++|++++++||+++.|.+++
T Consensus 76 ~~~~k~vfI~w~Pd~~~vk~Kmlyas~k~~l~~~~l~g~~~~i~a~~~~el~~e~i~~kl 135 (141)
T 1hqz_1 76 SDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKI 135 (141)
T ss_dssp CSCCEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTSCSCSEEEEESSGGGGCHHHHHHHH
T ss_pred CceeeEEEEEECCCCCChhheEEEeccHHHHHHHhCCceEEEEEECChHHCCHHHHHHHH
Confidence 789999999999999999999999999999998 99999999999999999999999987
No 18
>3daw_B Twinfilin-1, protein A6; actin depolymerisation, actin binding proteins, cytoskeleton, structural protein/contractIle protein complex; HET: ATP; 2.55A {Mus musculus} PDB: 2hd7_A
Probab=100.00 E-value=2.9e-38 Score=229.82 Aligned_cols=132 Identities=20% Similarity=0.386 Sum_probs=120.0
Q ss_pred cccCc--ccCHHHHHHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecCCCce
Q 032158 11 ATSGM--GVADHSKNAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQ 88 (146)
Q Consensus 11 ~~sGi--~vs~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~~~~~ 88 (146)
..+|| +|+++|.++|++|+.+ ..+||+|+|+.++++|+|+++ . +.+|++|.+.||+++|||+||+|++++. |+.
T Consensus 16 ~~~gv~~~v~~e~~~a~~~lk~~-~~~~iifkId~~~e~I~v~~~-~-~~~~~df~~~Lp~~~pRY~vyd~~~~~~-g~~ 91 (164)
T 3daw_B 16 TLQGVAFPISRDAFQALEKLSKK-QLNYVQLEIDIKNETIILANT-E-NTELRDLPKRIPKDSARYHFFLYKHSHE-GDY 91 (164)
T ss_dssp --CCCCCCBCHHHHHHHHHHHTT-SCSEEEEEEETTTTEEEEEEC-C-CCCGGGSGGGSCSSSCEEEEEEEEEEET-TEE
T ss_pred ccCcceEEECHHHHHHHHHHHcC-CceEEEEEEeCCCCEEEEEeC-C-CCCHHHHHHhCCccCceEEEEecccccC-CCc
Confidence 34566 7999999999999998 489999999998899999987 3 5899999999999999999999999876 556
Q ss_pred eecEEEEEEcCC-CCChhhhhHhHHhHHHHHHhcC---Ce--eEEEEeCCcCCCCHHHHHhhhC
Q 032158 89 KSKIFFIAWSPS-TSRIRAKMLYATSKDRFRRELD---GI--HYEIQATDPTEMDLEELRNRAN 146 (146)
Q Consensus 89 ~~k~vfI~w~P~-~a~vk~kMlYsssk~~l~~~l~---g~--~~~i~a~d~~dl~~~~i~~k~~ 146 (146)
..+++||+|||+ +|++|+||+|||+|++|++.|. |+ +++|||+|++||++++|.++|+
T Consensus 92 ~~~~ifi~~~P~~~a~ik~kMlYASsK~~l~~~l~~~~Gi~i~k~iea~d~~Elt~e~l~ekl~ 155 (164)
T 3daw_B 92 LESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIEIDNGDELTADFLYDEVH 155 (164)
T ss_dssp EEEEEEEEECCSTTSCHHHHHHHHHTHHHHHHHHHHHHCCCEEEEEEESSSSSCCHHHHHHHHS
T ss_pred cccEEEEEEcCCCCCCHHHHHHHHHhHHHHHHHHhhccCCceeEEEEeCChHHcCHHHHHhHhC
Confidence 678999999999 9999999999999999999998 77 8999999999999999999875
No 19
>3q2b_A Pfadf1, cofilin/actin-depolymerizing factor homolog 1; actin regulator, actin-binding protein; HET: TAR; 1.60A {Plasmodium falciparum} PDB: 2xf1_A
Probab=100.00 E-value=4.6e-39 Score=224.41 Aligned_cols=117 Identities=24% Similarity=0.524 Sum_probs=106.6
Q ss_pred ccccCcccCHHHHHHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCC---ceEEEEEeeeecCCC
Q 032158 10 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPEND---CRYAVYDFDYVTSEN 86 (146)
Q Consensus 10 ~~~sGi~vs~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~---pry~~~~~~~~~~~~ 86 (146)
+++|||.+++||.++|++|+.++++|||+|+|+. ++|+++.+++ ..+|++|.+.||+++ |||++||+
T Consensus 2 ~m~SGi~vs~e~~~~f~~lk~~k~~~~ii~kI~~--~~ivv~~~~~-~~~~~~f~~~Lp~~~~~~prY~vy~~------- 71 (124)
T 3q2b_A 2 SMISGIRVNDNCVTEFNNMKIRKTCGWIIFVIQN--CEIIIHSKGA-STTLTELVQSIDKNNEIQCAYVVFDA------- 71 (124)
T ss_dssp --CCSCEECHHHHHHHHHHHHHTSSEEEEEEEET--TEEEEEEEEE-CSCHHHHHHHHHHCTTCSEEEEEEEC-------
T ss_pred CCCCCCccCHHHHHHHHHHhcCCCcEEEEEEEcC--CEEEEeccCC-CCCHHHHHHHccccCCCCcEEEEEec-------
Confidence 3568999999999999999998789999999997 4899988775 479999999999999 99999998
Q ss_pred ceeecEEEEEEcCCCCChhhhhHhHHhHHHHHHhcCCee-EEEEeCCcCCCCH
Q 032158 87 CQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIH-YEIQATDPTEMDL 138 (146)
Q Consensus 87 ~~~~k~vfI~w~P~~a~vk~kMlYsssk~~l~~~l~g~~-~~i~a~d~~dl~~ 138 (146)
+++++||+|||++|++|+||+|||+|++|++.|+|++ .+++++|++||++
T Consensus 72 --~~k~vfI~w~Pd~a~vk~KMlYASsk~~l~~~l~g~~~~~i~a~d~~dlt~ 122 (124)
T 3q2b_A 72 --VSKIHFFMYARESSNSRDRMTYASSKQAILKKIEGVNVLTSVIESAQDVAD 122 (124)
T ss_dssp --SSCEEEEEEECTTSCHHHHHHHHHHHHHHHTTSTTSEECCSCBCSHHHHTT
T ss_pred --CCCEEEEEECCCCCChhHhhhhHHHHHHHHHHhCCCceEEEEecCHHHccc
Confidence 4699999999999999999999999999999999998 5899999999874
No 20
>2l72_A Tgadf, actin depolymerizing factor, putative; ADF/cofilin, actin binding, protein binding; NMR {Toxoplasma gondii}
Probab=100.00 E-value=4.6e-38 Score=223.20 Aligned_cols=116 Identities=37% Similarity=0.735 Sum_probs=106.9
Q ss_pred cccCcccCHHHHHHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecCCCceee
Q 032158 11 ATSGMGVADHSKNAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKS 90 (146)
Q Consensus 11 ~~sGi~vs~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~~~~~~~ 90 (146)
++|||++++||.++|++|+.++..|||+|+|+. ++|+++++++ + +|++|++.||+++|||+||| +| +
T Consensus 22 m~sGi~vs~e~~~af~~lk~~k~~~~ii~~I~~--~eivv~~~g~-~-~~~el~~~Lp~~~prY~~y~------dg---~ 88 (139)
T 2l72_A 22 MASGMGVDENCVARFNELKIRKTVKWIVFKIEN--TKIVVEKDGK-G-NADEFRGALPANDCRFGVYD------CG---N 88 (139)
T ss_dssp CCTTCEECHHHHHHHHHHTTTTCCCEEEEEEET--TEEEEEEEES-S-HHHHHHHHCCCCSCCEEEEE------CS---S
T ss_pred ccCCCCcCHHHHHHHHHHhCCCCeeEEEEEEcC--CEEEEeecCC-C-CHHHHHHhCCCCCcEEEEEc------CC---C
Confidence 478999999999999999998779999999998 6788888875 4 99999999999999999999 23 8
Q ss_pred cEEEEEEcCCCCChhhhhHhHHhHHHHHHhcCCeeEE-EEeCCcCCCCHH
Q 032158 91 KIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYE-IQATDPTEMDLE 139 (146)
Q Consensus 91 k~vfI~w~P~~a~vk~kMlYsssk~~l~~~l~g~~~~-i~a~d~~dl~~~ 139 (146)
+++||+|||++||+|+||+|||+|++|++.|+|+++. |++++++||+++
T Consensus 89 k~vFI~w~Pd~a~vk~KMlYASsk~~lk~~l~g~~v~~iea~~~~DLte~ 138 (139)
T 2l72_A 89 KIQFVLWCPDNAPVKPRMTYASSKDALLKKLDGATAVALEAHEMGDLAPL 138 (139)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCSCCSCEEEESSTTTTSCC
T ss_pred cEEEEEECCCCCChhHeeehHhhHHHHHHHhCCceEEEEEeCCHHHCccC
Confidence 9999999999999999999999999999999998775 999999999875
No 21
>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens}
Probab=100.00 E-value=4.6e-37 Score=219.67 Aligned_cols=130 Identities=19% Similarity=0.305 Sum_probs=118.0
Q ss_pred cccCcccC-----HHHHHHHHHHHhcC-cceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecC
Q 032158 11 ATSGMGVA-----DHSKNAFTELQRKK-VHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTS 84 (146)
Q Consensus 11 ~~sGi~vs-----~e~~~a~~~l~~~~-~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~ 84 (146)
++||+.++ ++|.++|++++.++ .+||++|+|+++.++|+|..+|+ .+|+||++.|++++|||++||++.
T Consensus 4 ~~~~m~~~l~~~~~e~~~a~~~v~~~~~~~~wi~~~i~~~~~~l~v~~~G~--~~~~e~~~~L~~~~~~Y~~~r~~~--- 78 (146)
T 1x67_A 4 GSSGMAANLSRNGPALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGE--GGLEEMVEELNSGKVMYAFCRVKD--- 78 (146)
T ss_dssp SSSSSCCCCCTTHHHHHHHHHHHHCSSSSCSEEEEEESSSSSCEEEEEEES--SCHHHHHHHCCTTSEEEEEEEEEC---
T ss_pred cccceEEEcCCCCHHHHHHHHHHHcCCCCccEEEEEEeCCCcEEEEEeccC--CCHHHHHhhCCCCceEEEEEEEEc---
Confidence 34455555 99999999999987 49999999988767899998874 689999999999999999999984
Q ss_pred CCceeecEEEEEEcCCCCChhhhhHhHHhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhh
Q 032158 85 ENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 145 (146)
Q Consensus 85 ~~~~~~k~vfI~w~P~~a~vk~kMlYsssk~~l~~~l~g~~~~i~a~d~~dl~~~~i~~k~ 145 (146)
+++.++|+|||.||||++|+|+||+||+++.+|++.|+|+|++|+|++++||+++.|.+++
T Consensus 79 ~~~~~~K~vfI~W~pd~a~v~~Km~yas~k~~lk~~l~g~~~ei~at~~~el~~~~i~~k~ 139 (146)
T 1x67_A 79 PNSGLPKFVLINWTGEGVNDVRKGACASHVSTMASFLKGAHVTINARAEEDVEPECIMEKV 139 (146)
T ss_dssp SSSCSEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTTEEEEECCCSGGGGCHHHHHHHH
T ss_pred CCCCeeeEEEEEECCCCCChhheeeehhhHHHHHHhcCCcEEEEEeCChHHCCHHHHHHHH
Confidence 3567899999999999999999999999999999999999999999999999999999886
No 22
>1t3y_A Coactosin-like protein; beta sheet, protein binding; 1.15A {Homo sapiens} SCOP: d.109.1.2 PDB: 1t2l_A 1t3x_A 1vfq_A 1tmw_A 1wnj_A 1udm_A 1wm4_A
Probab=100.00 E-value=1e-33 Score=201.28 Aligned_cols=122 Identities=16% Similarity=0.286 Sum_probs=113.4
Q ss_pred CHHHHHHHHHHHhcC-cceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecCCCceeecEEEEE
Q 032158 18 ADHSKNAFTELQRKK-VHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIA 96 (146)
Q Consensus 18 s~e~~~a~~~l~~~~-~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~~~~~~~k~vfI~ 96 (146)
+++|.+||++++.++ .++|++|+|+++ +|+|+.+|+ +|+||++.||+++|||++||+. ..++++.++|+|||.
T Consensus 6 ~~~~~~a~~~v~~~~~~~~wilf~~~~~--~i~v~~~G~---g~~e~~~~L~~~~~~Ya~~r~~-~~~~~~~~~K~vfI~ 79 (141)
T 1t3y_A 6 KEACRAAYNLVRDDGSAVIWVTFKYDGS--TIVPGEQGA---EYQHFIQQCTDDVRLFAFVRFT-TGDAMSKRSKFALIT 79 (141)
T ss_dssp HHHHHHHHHHHHCTTSSCCEEEEEEETT--EEEEEEEES---SHHHHHHHCCTTCEEEEEEEEE-ECSGGGCEEEEEEEE
T ss_pred hHHHHHHHHHHHcCCCCceEEEEEEcCC--EEEEEecCC---CHHHHHhhCCCCceEEEEEEEE-ecCCCCceeeEEEEE
Confidence 689999999999986 599999999873 599998874 5999999999999999999996 556678899999999
Q ss_pred EcCCCCChhhhhHhHHhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhh
Q 032158 97 WSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 145 (146)
Q Consensus 97 w~P~~a~vk~kMlYsssk~~l~~~l~g~~~~i~a~d~~dl~~~~i~~k~ 145 (146)
|||+++|++.||+|+++++.|++.|+|+|.+|+|+|++||+++.|.+++
T Consensus 80 W~pd~~~~~~K~~~as~k~~vk~~l~g~~~~i~a~d~~el~~~~I~~kv 128 (141)
T 1t3y_A 80 WIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIKSEL 128 (141)
T ss_dssp EECTTSCHHHHHHHHHHHHHHTTTSCCCSEEEEECSGGGGSHHHHHHHH
T ss_pred ECCCCCCHHHhhhHHHHHHHHHHHhcccEEEEEeCChHHCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999886
No 23
>2vik_A Villin 14T; actin-binding protein, capping protein, calcium-binding protein, cytoskeletal protein; NMR {Gallus gallus} SCOP: d.109.1.1 PDB: 2vil_A
Probab=58.92 E-value=37 Score=22.56 Aligned_cols=77 Identities=16% Similarity=0.165 Sum_probs=48.7
Q ss_pred CcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecCCCceeecEEEEEEcCCCCChhhhhHhH
Q 032158 32 KVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYA 111 (146)
Q Consensus 32 ~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~~~~~~~k~vfI~w~P~~a~vk~kMlYs 111 (146)
.+...-|.+|++. +.+.+... ....+-+.+| |++.. .+. .. .+....+-+|++..++..++..-|
T Consensus 14 ~~~~l~vWrIe~~-~~~~vp~~---------~~G~Fy~gd~-YIvl~-t~~-~~--g~~~~~i~~W~G~~ss~de~g~Aa 78 (126)
T 2vik_A 14 TTPGIQIWRIENM-EMVPVPTK---------SYGNFYEGDC-YVLLS-TRK-TG--SGFSYNIHYWLGKNSSQDEQGAAA 78 (126)
T ss_dssp SCCEEEEEECGGG-SCCEECTT---------TTTCCCSSSC-EEEEE-EEE-CS--SSEEEEEEEEECTTSCHHHHHHHH
T ss_pred CCCCEEEEEEeCC-EEEECChh---------hcCeeCCCCe-EEEEE-ecc-CC--CceeEEEEEEeCCCCCchhHHHHH
Confidence 3456677777743 23333221 1234556565 55543 222 22 245778899999999999998887
Q ss_pred HhHHHHHHhcCC
Q 032158 112 TSKDRFRRELDG 123 (146)
Q Consensus 112 ssk~~l~~~l~g 123 (146)
.--..|-+.|+|
T Consensus 79 ~~aveLd~~lgg 90 (126)
T 2vik_A 79 IYTTQMDEYLGS 90 (126)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHHHHHcCC
Confidence 777788888876
No 24
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=53.60 E-value=31 Score=22.09 Aligned_cols=59 Identities=14% Similarity=0.235 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEE
Q 032158 19 DHSKNAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYD 78 (146)
Q Consensus 19 ~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~ 78 (146)
-++..++.++..-...+..+..+|.+++.+++.=.|. +.+|+++.+.+..-.+.-+=.|
T Consensus 22 ~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~-~id~d~I~~~IE~~Gg~IHSID 80 (97)
T 2raq_A 22 PEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGN-DLDFDEITRAIESYGGSIHSVD 80 (97)
T ss_dssp HHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECS-SCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEec-CCCHHHHHHHHHHcCCeEEeee
Confidence 3566677777655568899999999988887766664 6899999988876666544444
No 25
>2ff3_A Gelsolin; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 PDB: 2ff6_G*
Probab=52.61 E-value=54 Score=22.55 Aligned_cols=86 Identities=10% Similarity=0.079 Sum_probs=54.0
Q ss_pred HHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecCCCceeecEEEEEEcCCCC
Q 032158 23 NAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTS 102 (146)
Q Consensus 23 ~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~~~~~~~k~vfI~w~P~~a 102 (146)
.+|+.... ....-|.+|++. +.+.+.+. ....+-+.+|--++|.+.. .. .+....+-+|++..+
T Consensus 28 ~~f~~~g~--~~gl~VWrIe~~-~~v~vp~~---------~~G~FysgD~YIVl~ty~~--~~--g~~~~~IyfW~G~~s 91 (150)
T 2ff3_A 28 PEFLKAGK--EPGLQIWRVEKF-DLVPVPTN---------LYGDFFTGDAYVILKTVQL--RN--GNLQYDLHYWLGNEC 91 (150)
T ss_dssp HHHHHTTS--SSEEEEEEEETT-EEEECCGG---------GTTEEETTSEEEEEEEEEC--TT--SSEEEEEEEEECTTC
T ss_pred hhhhccCC--CCCeEEEEEeCC-EEEECChH---------HcCeecCCCeEEEEEEEec--CC--CceEEEEEEEeCCCC
Confidence 46666543 456778889863 33333221 1234555555444454432 22 245778899999999
Q ss_pred ChhhhhHhHHhHHHHHHhcCCe
Q 032158 103 RIRAKMLYATSKDRFRRELDGI 124 (146)
Q Consensus 103 ~vk~kMlYsssk~~l~~~l~g~ 124 (146)
+..++..-|.--..|-+.|+|.
T Consensus 92 s~de~gaAA~~aveLd~~lgg~ 113 (150)
T 2ff3_A 92 SQDESGAAAIFTVQLDDYLNGR 113 (150)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTC
T ss_pred CchhHHHHHHHHHHHHHHcCCC
Confidence 9999988777777788888763
No 26
>3u42_A 50S ribosomal protein L1; rossmann fold, rRNA binding, RNA binding; 1.35A {Thermus thermophilus} PDB: 3u56_A 3u4m_A 1eg0_N 1vsp_A 2hgj_C 2hgq_C 2hgu_C 1vsa_A 4f9t_A* 4abs_C 3zvp_C 1zho_A 1ml5_c* 1yl3_C 1giy_C 3umy_A 2hw8_A 2j01_C 2j03_C 2om7_K* ...
Probab=51.84 E-value=10 Score=28.13 Aligned_cols=35 Identities=29% Similarity=0.504 Sum_probs=25.8
Q ss_pred ccCCCcccccCcccCHHHHHHHHHHHhcCcceEEEEEEeCC
Q 032158 4 RGLSRPNATSGMGVADHSKNAFTELQRKKVHRYVIFKIDEK 44 (146)
Q Consensus 4 ~~~~~~~~~sGi~vs~e~~~a~~~l~~~~~~~~vi~~i~~~ 44 (146)
||| |.+.-.|. +++++.+++++++.++ +-|+.+..
T Consensus 135 rGl-MPnpk~GT-vt~dv~~~v~~~K~g~----v~~r~dk~ 169 (229)
T 3u42_A 135 RGL-LPNPKAGT-VGFNIGEIIREIKAGR----IEFRNDKT 169 (229)
T ss_dssp HTC-CCCGGGTC-BSSCHHHHHHHHHTTE----EEEECCTT
T ss_pred ccc-cccCCCCC-CCCCHHHHHHHHhCce----EEEEeCCC
Confidence 677 66666665 7889999999999873 55666654
No 27
>3cip_G Gelsolin; actin, dictyostelium discoideum, actin-associated methyl histidine, ATP-binding, cytoskeleton, nucleotide-BIN phosphoprotein; HET: HIC ATP; 1.60A {Homo sapiens} SCOP: d.109.1.1 PDB: 3ci5_G* 1p8z_G* 1d4x_G* 1nlv_G* 1mdu_A* 1nm1_G* 1nmd_G* 1yag_G* 1yvn_G* 3cjb_G* 3cjc_G* 1esv_S* 1eqy_S* 1c0g_S* 1c0f_S* 1dej_S* 3a5l_S* 3a5m_S* 3a5n_S* 3a5o_S*
Probab=51.06 E-value=51 Score=21.88 Aligned_cols=86 Identities=10% Similarity=0.074 Sum_probs=54.4
Q ss_pred HHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecCCCceeecEEEEEEcCCCC
Q 032158 23 NAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTS 102 (146)
Q Consensus 23 ~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~~~~~~~k~vfI~w~P~~a 102 (146)
.+|+.... ....-|.+|++. +.+.+... ....+-+.+|--++|.+. ... .+....+-+|++..+
T Consensus 9 ~~~~~~g~--~~gl~vWrIe~~-~~~~vp~~---------~~G~Fy~gd~YIvl~ty~--~~~--g~~~~~i~~W~G~~s 72 (128)
T 3cip_G 9 PEFLKAGK--EPGLQIWRVEKF-DLVPVPTN---------LYGDFFTGDAYVILKTVQ--LRN--GNLQYDLHYWLGNEC 72 (128)
T ss_dssp HHHHHTTS--SSEEEEEEEETT-EEEECCGG---------GTTEEETTCEEEEEEEEE--CTT--SCEEEEEEEEECTTC
T ss_pred hhHHhcCC--CCCeEEEEEeCC-EEEECChH---------HcCeecCCCeEEEEEEEe--cCC--CceEEEEEEEcCCCC
Confidence 45666543 456778889863 33333221 123455555544444443 222 245678899999999
Q ss_pred ChhhhhHhHHhHHHHHHhcCCe
Q 032158 103 RIRAKMLYATSKDRFRRELDGI 124 (146)
Q Consensus 103 ~vk~kMlYsssk~~l~~~l~g~ 124 (146)
+..++...|.--..|.+.|+|-
T Consensus 73 s~de~g~Aa~~aveLd~~lgg~ 94 (128)
T 3cip_G 73 SQDESGAAAIFTVQLDDYLNGR 94 (128)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTC
T ss_pred CcchHHHHHHHHHHHHHHcCCC
Confidence 9999988888778888888873
No 28
>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1
Probab=48.73 E-value=61 Score=22.08 Aligned_cols=85 Identities=11% Similarity=0.084 Sum_probs=53.7
Q ss_pred HHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecCCCceeecEEEEEEcCCCC
Q 032158 23 NAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTS 102 (146)
Q Consensus 23 ~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~~~~~~~k~vfI~w~P~~a 102 (146)
.+|+.... ....-|.+|++. +.+.+... ....+-..+|--++|.+. ... .+....+-+|++..+
T Consensus 6 ~~f~~~g~--~~gl~VWrIe~~-~~~~vp~~---------~~G~Fy~gd~YIvl~ty~--~~~--g~~~~~i~~W~G~~s 69 (147)
T 1t44_G 6 PEFLKAGK--EPGLQIWRVEKF-DLVPVPTN---------LYGDFFTGDAYVILKTVQ--LRN--GNLQYDLHYWLGNEC 69 (147)
T ss_dssp HHHHHTTS--SSEEEEEEEETT-EEEECCGG---------GTTEEETTCEEEEEEEEE--CTT--SCEEEEEEEEECTTC
T ss_pred hhhhccCC--CCCeEEEEEeCC-EEEECChH---------HcCeecCCCeEEEEEEEe--cCC--CceEEEEEEEeCCCC
Confidence 35665533 456788899863 23333221 123455556544444443 222 245778899999999
Q ss_pred ChhhhhHhHHhHHHHHHhcCC
Q 032158 103 RIRAKMLYATSKDRFRRELDG 123 (146)
Q Consensus 103 ~vk~kMlYsssk~~l~~~l~g 123 (146)
+..++..-|.--..|.+.|+|
T Consensus 70 s~de~g~Aa~~aveLd~~lgg 90 (147)
T 1t44_G 70 SQDESGAAAIFTVQLDDYLNG 90 (147)
T ss_dssp CHHHHHHHHHHHHHHHHHTTT
T ss_pred ChhHHHHHHHHHHHHHHHcCC
Confidence 999998877777788888876
No 29
>3tu5_B Gelsolin, protein cordon-BLeu, thymosin beta-4; unusual hairpin conformation in the D-loop, structural prote binding protein complex; HET: ATP; 3.00A {Homo sapiens}
Probab=46.32 E-value=94 Score=23.75 Aligned_cols=85 Identities=12% Similarity=0.137 Sum_probs=52.6
Q ss_pred HHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEEeeeecCCCceeecEEEEEEcCCCC
Q 032158 23 NAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTS 102 (146)
Q Consensus 23 ~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~~~~~~~~~~~~~k~vfI~w~P~~a 102 (146)
.||+.... ..-.-|.+|++- +++..... ....+-..+| |+++.- +.... .+..+.+-+|++..+
T Consensus 24 ~~~~~~g~--~~Gl~iWrIe~~--~~~~v~~~--------~~G~Fy~gd~-Yivl~t-~~~~~--g~~~~~i~~W~G~~s 87 (297)
T 3tu5_B 24 PEFLKAGK--EPGLQIWRVEKF--DLVPVPTN--------LYGDFFTGDA-YVILKT-VQLRN--GNLQYDLHYWLGNEC 87 (297)
T ss_dssp HHHHHTTS--SSEEEEEEEETT--EEEECCGG--------GTTEEETTCE-EEEEEE-EECTT--SCEEEEEEEEECTTC
T ss_pred hhHhccCC--CCceEEEEEcCC--EEEECCHH--------HcCeecCCCe-EEEeEe-EECCC--CceeEEEEEEeCCCC
Confidence 56665533 345677788763 33332211 1234555555 665532 22222 245677889999999
Q ss_pred ChhhhhHhHHhHHHHHHhcCC
Q 032158 103 RIRAKMLYATSKDRFRRELDG 123 (146)
Q Consensus 103 ~vk~kMlYsssk~~l~~~l~g 123 (146)
+.-++..-|.--..|.+.|+|
T Consensus 88 s~de~g~aa~~av~Ld~~lgg 108 (297)
T 3tu5_B 88 SQDESGAAAIFTVQLDDYLNG 108 (297)
T ss_dssp CHHHHHHHHHHHHHHHHHTTT
T ss_pred ChhHHHHHHHHHHHHHHHcCC
Confidence 999998888777788888887
No 30
>2k5j_A Uncharacterized protein YIIF; structure, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Shigella flexneri 5 str}
Probab=46.01 E-value=13 Score=22.63 Aligned_cols=26 Identities=8% Similarity=0.226 Sum_probs=20.5
Q ss_pred cccCCCcccccCcccCHHHHHHHHHHHh
Q 032158 3 FRGLSRPNATSGMGVADHSKNAFTELQR 30 (146)
Q Consensus 3 ~~~~~~~~~~sGi~vs~e~~~a~~~l~~ 30 (146)
++|.. |...+|.++++..+.++.+..
T Consensus 4 ~~~m~--m~risI~Lpdel~~~Ld~la~ 29 (80)
T 2k5j_A 4 LAGID--MGRILLDLSNEVIKQLDDLEV 29 (80)
T ss_dssp CSSTT--CCEEEEEECHHHHHHHHHHHH
T ss_pred cccce--eEEEEEECCHHHHHHHHHHHH
Confidence 56664 445689999999999999964
No 31
>2p2e_A Putative Fe-S biosynthesis protein; hypothetical protein, beta-barrel, 10399L structural genomics, protein structure initiative, PSI-2; 2.48A {Lactobacillus salivarius} SCOP: b.124.1.1
Probab=44.07 E-value=25 Score=23.38 Aligned_cols=28 Identities=11% Similarity=0.305 Sum_probs=22.7
Q ss_pred CcccCHHHHHHHHHHHhcCcceEEEEEEe
Q 032158 14 GMGVADHSKNAFTELQRKKVHRYVIFKID 42 (146)
Q Consensus 14 Gi~vs~e~~~a~~~l~~~~~~~~vi~~i~ 42 (146)
.|.+++.+.+.++++.... .+.+.|+++
T Consensus 4 ~ItlT~~A~~~l~~~l~~~-~~~l~Lr~~ 31 (128)
T 2p2e_A 4 KITVTDDAAKKLQRYTDDS-NAVLLLDFD 31 (128)
T ss_dssp EEEECHHHHHHHHHHHTCT-TEEEEEEEC
T ss_pred EEEECHHHHHHHHHHHhcC-CceEEEEEe
Confidence 5999999999999997764 335778887
No 32
>2ay0_A Bifunctional PUTA protein; ribbon-helix-helix, DNA-binding domain, proline catabo proline utilization A, DNA binding protein; 2.10A {Escherichia coli} SCOP: a.43.1.11
Probab=41.81 E-value=11 Score=21.54 Aligned_cols=24 Identities=13% Similarity=0.223 Sum_probs=18.8
Q ss_pred CcccccCcccCHHHHHHHHHHHhc
Q 032158 8 RPNATSGMGVADHSKNAFTELQRK 31 (146)
Q Consensus 8 ~~~~~sGi~vs~e~~~a~~~l~~~ 31 (146)
|+|..-+|.++++..+.++.+...
T Consensus 1 M~~~~~svrL~~el~~rL~~lA~~ 24 (58)
T 2ay0_A 1 MGTTTMGVMLDDATRERIKSAATR 24 (58)
T ss_dssp --CEEEEEEECHHHHHHHHHHHHH
T ss_pred CCCcceEeECCHHHHHHHHHHHHH
Confidence 456666899999999999999654
No 33
>3qoy_A 50S ribosomal protein L1; beta-alpha-beta, structural constituent of ribosome, rRNA BI regulation of translation, translation, ribosomal RNA; 2.10A {Aquifex aeolicus}
Probab=41.13 E-value=22 Score=26.58 Aligned_cols=35 Identities=34% Similarity=0.652 Sum_probs=25.2
Q ss_pred ccCCCcccccCcccCHHHHHHHHHHHhcCcceEEEEEEeCC
Q 032158 4 RGLSRPNATSGMGVADHSKNAFTELQRKKVHRYVIFKIDEK 44 (146)
Q Consensus 4 ~~~~~~~~~sGi~vs~e~~~a~~~l~~~~~~~~vi~~i~~~ 44 (146)
||| |.+.-.|. +++++.+++++++.|+ +.|+.+..
T Consensus 138 rGl-mP~pk~gT-vt~dv~~~V~~~k~G~----v~fr~~k~ 172 (242)
T 3qoy_A 138 RGL-MPSPKTGT-VTTNVEQAIKDAKRGR----VEFKVDKA 172 (242)
T ss_dssp GTC-SCCGGGTC-BCSCHHHHHHHHHTTE----EEEECCTT
T ss_pred ccC-CCcccCCc-cchhHHHHHHHHhcCc----EEEEecCC
Confidence 666 66665554 6789999999999873 55676653
No 34
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=35.50 E-value=34 Score=21.88 Aligned_cols=58 Identities=14% Similarity=0.249 Sum_probs=41.1
Q ss_pred HHHHHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEE
Q 032158 20 HSKNAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYD 78 (146)
Q Consensus 20 e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~ 78 (146)
++..++.++..-...+..+..+|.+++.+++.=.|. +.+|+++.+.+..-.+.-+=.+
T Consensus 22 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~-~idfd~I~~~IE~~Gg~IHSID 79 (96)
T 2x3d_A 22 DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGT-SLNFDDIRKMLEEEGCAIHSID 79 (96)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEES-SCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEec-CCCHHHHHHHHHHcCCeEEeee
Confidence 455566666544458888999999888777765664 6899999988876666554444
No 35
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=33.24 E-value=19 Score=23.20 Aligned_cols=59 Identities=14% Similarity=0.138 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhcCCCCCceEEEEE
Q 032158 19 DHSKNAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAALPENDCRYAVYD 78 (146)
Q Consensus 19 ~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~L~~~~pry~~~~ 78 (146)
-++..++.++..-...+..+..+|.+++.+++.=.|. +.+|+++.+.+..-.+.-.=.|
T Consensus 22 vdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~-dIdfd~I~~~IE~~GgvIHSID 80 (100)
T 3bpd_A 22 IVFALKLSELENVDGVNIHLSEIDQATENIKITILGN-NLDYEQIKGVIEDMGGVIHSVD 80 (100)
T ss_dssp HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEE-EECHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEec-CCCHHHHHHHHHHcCCeEEeee
Confidence 3555666666544468889999999888777665563 6899999988877666554444
No 36
>2ygw_A Malonyl-COA decarboxylase, mitochondrial; lyase; 2.80A {Homo sapiens}
Probab=32.97 E-value=20 Score=29.31 Aligned_cols=35 Identities=6% Similarity=0.037 Sum_probs=27.2
Q ss_pred CCCHHHHHhcCCCCCceEEEEEeeeecCCCceeecEEEEEE
Q 032158 57 AESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAW 97 (146)
Q Consensus 57 ~~~~~e~~~~L~~~~pry~~~~~~~~~~~~~~~~k~vfI~w 97 (146)
=.+|+||..-|.++--||+||....+ ..++|||.-
T Consensus 191 I~~W~DLkrRL~pdRRCfaFFHp~mP------~EPLIfVeV 225 (460)
T 2ygw_A 191 VKNWMDMKRRVGPYRRCYFFSHCSTP------GEPLVVLHV 225 (460)
T ss_dssp CCSHHHHHHHTSTTEEEEEEEETTBT------TCCSEEEEE
T ss_pred cCCHHHHHHhcCCCCeEEEecCCCCC------CCCeEEEee
Confidence 36899999999888999999987643 356677653
No 37
>2wwq_5 50S ribosomal protein L1; ribosomal protein, ribonucleoprotein, nucleotide-binding, protein biosynthesis, translation, zinc-finger; HET: 5MU; 5.80A {Escherichia coli} PDB: 3fik_5 3izt_C* 3izu_C* 3j01_5 3j0t_C* 3j0w_C* 3j0y_C* 3j11_C* 3j12_C* 3j14_C* 3kcr_5 2rdo_9 2gya_2 2gyc_2
Probab=29.27 E-value=23 Score=26.20 Aligned_cols=35 Identities=29% Similarity=0.484 Sum_probs=25.0
Q ss_pred ccCCCcccccCcccCHHHHHHHHHHHhcCcceEEEEEEeCC
Q 032158 4 RGLSRPNATSGMGVADHSKNAFTELQRKKVHRYVIFKIDEK 44 (146)
Q Consensus 4 ~~~~~~~~~sGi~vs~e~~~a~~~l~~~~~~~~vi~~i~~~ 44 (146)
||| |.+.-.|. +++++.+++++++.++ +.|+.+..
T Consensus 134 rGl-mP~pk~gT-vt~dv~~~V~~~k~g~----v~~r~~k~ 168 (234)
T 2wwq_5 134 RGL-MPNPKVGT-VTPNVAEAVKNAKAGQ----VRYRNDKN 168 (234)
T ss_dssp SCC-SCCTTTTC-BCSCSHHHHHHHHHHE----EEECCSSS
T ss_pred CCC-CCCccCCC-ccccHHHHHHHHHcCe----eEEEecCC
Confidence 565 66666664 6789999999999873 45665553
No 38
>2gpe_A Bifunctional protein PUTA; ribbon-helix-helix, DNA-binding domain, proline catabo proline utilization A, DNA binding protein; 1.90A {Escherichia coli} PDB: 2rbf_A* 2jxg_A 2jxh_A 2jxi_A*
Probab=27.44 E-value=20 Score=19.51 Aligned_cols=24 Identities=13% Similarity=0.256 Sum_probs=18.6
Q ss_pred CcccccCcccCHHHHHHHHHHHhc
Q 032158 8 RPNATSGMGVADHSKNAFTELQRK 31 (146)
Q Consensus 8 ~~~~~sGi~vs~e~~~a~~~l~~~ 31 (146)
|+|..-+|.++++..+.++.+...
T Consensus 1 M~~~~~sirl~~~l~~~l~~lA~~ 24 (52)
T 2gpe_A 1 MGTTTMGVKLDDATRERIKSAATR 24 (52)
T ss_dssp -CEEEEEEEEEHHHHHHHHHHHHH
T ss_pred CCcceEEEECCHHHHHHHHHHHHH
Confidence 455556799999999999999653
No 39
>1fmd_1 Foot-and-mouth disease virus (subunit VP1); icosahedral virus; 3.50A {Foot-and-mouth disease virus} SCOP: b.121.4.1 PDB: 1qgc_1 1qgc_5
Probab=26.43 E-value=97 Score=22.52 Aligned_cols=30 Identities=17% Similarity=0.390 Sum_probs=21.1
Q ss_pred CceEEEEEeeeecCCCceeecEEEEEEcCCCCChhh
Q 032158 71 DCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRA 106 (146)
Q Consensus 71 ~pry~~~~~~~~~~~~~~~~k~vfI~w~P~~a~vk~ 106 (146)
-.-|..+|++.+-- .. .-|+|+|.+||+..
T Consensus 68 ~FTY~rfDlEvtvv-----~~-~qvmyvPpGaP~p~ 97 (208)
T 1fmd_1 68 AATYYFSDLEIAVT-----HT-GKLTWVPNGAPVSA 97 (208)
T ss_dssp TEEEEEEEEEEEEE-----EE-EEEEEECTTCCGGG
T ss_pred ccEEEeccEEEEEE-----Ee-eEEEEECCCCCchh
Confidence 44677777776521 11 57999999999874
No 40
>3bbo_D Ribosomal protein L1; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=26.38 E-value=31 Score=27.26 Aligned_cols=55 Identities=29% Similarity=0.419 Sum_probs=33.1
Q ss_pred ccCCCcccccCcccCHHHHHHHHHHHhcCcceEEEEEEeCCccEEEEeeCCCCCCCHHHHHhc
Q 032158 4 RGLSRPNATSGMGVADHSKNAFTELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFAAA 66 (146)
Q Consensus 4 ~~~~~~~~~sGi~vs~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~~~~~~~~~e~~~~ 66 (146)
||| |.+.-.| .+++++.+++++++.++ +.|+.+.. .+.-...|..+-+-+++.++
T Consensus 248 RGl-MPnPk~G-TVt~Dva~aV~e~K~G~----v~fR~dK~--g~ihv~VGk~sfs~EqL~EN 302 (352)
T 3bbo_D 248 RGL-MPTPKAG-TVTPNVAQAVEEFKKGK----VEFRVDKT--GIVHIPFGKLNFEEEDLLIN 302 (352)
T ss_dssp TTC-SCCTTTT-CBSSCHHHHHTTTTTCC----EEEECCSS--CEECCCCEETTSCHHHHHHH
T ss_pred cCC-CCCCcCC-cccccHHHHHHHHHcCe----eEEEeCCC--CEEEEEEeCCCCCHHHHHHH
Confidence 565 6676666 36889999999999874 55666653 23333333223344444443
No 41
>3vbh_A EV71, genome polyprotein, capsid protein VP1; hand-foot-and-mouth disease, enterovirus uncoating, P factor, adaptor-sensor; HET: SPH; 2.30A {Human enterovirus 71} PDB: 3vbf_A* 3vbo_A 3vbs_A* 4aed_A* 3vbr_A 3vbu_A
Probab=25.06 E-value=94 Score=23.87 Aligned_cols=45 Identities=9% Similarity=0.213 Sum_probs=25.8
Q ss_pred HHHHHhcCCCCCceEEEEEeeee---c-CCCceeecEEEEEEcCCCCChhh
Q 032158 60 YEDFAAALPENDCRYAVYDFDYV---T-SENCQKSKIFFIAWSPSTSRIRA 106 (146)
Q Consensus 60 ~~e~~~~L~~~~pry~~~~~~~~---~-~~~~~~~k~vfI~w~P~~a~vk~ 106 (146)
..++.-+|. ---|.-+|++++ + ..+....-.+-|+|+|.+||+..
T Consensus 116 ~~QlRrKLe--~FTY~RfDlEvT~V~t~~~~~~~~~~~QvmyvPpGaP~p~ 164 (297)
T 3vbh_A 116 YAQMRRKVE--LFTYMRFDAEFTFVACTPTGEVVPQLLQYMFVPPGAPKPD 164 (297)
T ss_dssp SHHHHHHHT--TEEEEEEEEEEEEEEECTTSCCCCCEEEEEEECTTSCCCC
T ss_pred HHHHHhhhc--eeEEEeeeeEEEEEEecCCCCCCceEEEEEEcCCCCCCCC
Confidence 445555552 245666666654 1 12212233456899999999764
No 42
>1qqp_1 FMDV, protein (genome polyprotein); heparan sulphate, virus-receptor interactions/protein carbohydrate interactions; HET: IDX SGN IDS; 1.90A {Foot-and-mouth disease virus} SCOP: b.121.4.1 PDB: 1bbt_1 1fod_1
Probab=24.53 E-value=61 Score=23.72 Aligned_cols=29 Identities=17% Similarity=0.350 Sum_probs=19.8
Q ss_pred ceEEEEEeeeecCCCceeecEEEEEEcCCCCChhh
Q 032158 72 CRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRA 106 (146)
Q Consensus 72 pry~~~~~~~~~~~~~~~~k~vfI~w~P~~a~vk~ 106 (146)
.-|..+|++.+-- .. .=|+|+|.+||+..
T Consensus 69 fTY~rfDlEvTvv----~~--~qvmwvPpGAP~p~ 97 (213)
T 1qqp_1 69 STYYFSDLEIAVK----HE--GDLTWVPNGAPEKA 97 (213)
T ss_dssp EEEEEEEEEEEEE----EE--SCEEEECTTCCGGG
T ss_pred cEEEeeeEEEEEE----Ec--cEEEEECCCCCCcc
Confidence 4577777776421 11 36899999999876
No 43
>2ftc_A Mitochondrial ribosomal protein L1; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus}
Probab=24.48 E-value=1.5e+02 Score=20.83 Aligned_cols=31 Identities=13% Similarity=0.255 Sum_probs=23.0
Q ss_pred CcccccCcccCHHHHHHHHHHHhcCcceEEEEEEeCC
Q 032158 8 RPNATSGMGVADHSKNAFTELQRKKVHRYVIFKIDEK 44 (146)
Q Consensus 8 ~~~~~sGi~vs~e~~~a~~~l~~~~~~~~vi~~i~~~ 44 (146)
|.+.-+|. +++++.+++++++.+. .|+.+..
T Consensus 96 mP~pk~gT-vt~dv~~~v~~~k~g~-----~~r~~k~ 126 (189)
T 2ftc_A 96 YPKLSRNS-IGRDIPKMLELFKNGH-----EIKVDEE 126 (189)
T ss_pred CCcccCCC-ccccHHHHHHHHhcce-----EEEeccC
Confidence 66666664 6889999999999872 4666654
No 44
>4b9x_A TDRD1, tudor domain-containing protein 1; replication; 2.80A {Mus musculus}
Probab=24.13 E-value=2e+02 Score=20.50 Aligned_cols=40 Identities=8% Similarity=-0.020 Sum_probs=30.1
Q ss_pred CcccCHHHHHHHHHHHhcCcceEEEEEEeCCccEEEEeeC
Q 032158 14 GMGVADHSKNAFTELQRKKVHRYVIFKIDEKKKEVVVEKT 53 (146)
Q Consensus 14 Gi~vs~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~~ 53 (146)
+-.|++++.+.|+++-.++....-++.+..+.-.|.|-..
T Consensus 140 ~~~w~~ea~~~f~~l~~~k~l~~~V~~~~~~~~~V~L~d~ 179 (226)
T 4b9x_A 140 NKHWTKEATARFQACVVGLKLQARVVEITANGVGVELTDL 179 (226)
T ss_dssp SSSCCHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHCCCeEEEEEEEEeCCeEEEEEEEC
Confidence 4469999999999998887666777777766555666543
No 45
>1ncq_A Coat protein VP1; HRV, pleconaril, icosahedral virus; HET: W11; 2.50A {Human rhinovirus 14} SCOP: b.121.4.1 PDB: 1d3i_1* 1hrv_1* 1hri_1* 1na1_A* 1k5m_A* 1r08_1* 1r09_1* 1rvf_1 1vrh_1* 2hwb_1* 2hwc_1* 2r04_1* 2r06_1* 2r07_1* 2rm2_1* 2rr1_1* 2rs1_1* 2rs3_1* 2rs5_1* 4rhv_1 ...
Probab=23.25 E-value=1.1e+02 Score=23.37 Aligned_cols=34 Identities=15% Similarity=0.337 Sum_probs=20.6
Q ss_pred eEEEEEeeee---cC---CC--ceeecEEEEEEcCCCCChhh
Q 032158 73 RYAVYDFDYV---TS---EN--CQKSKIFFIAWSPSTSRIRA 106 (146)
Q Consensus 73 ry~~~~~~~~---~~---~~--~~~~k~vfI~w~P~~a~vk~ 106 (146)
-|..+|++.+ +. .+ ....-.+-|+|+|.+||+..
T Consensus 120 TY~RfDlEvT~V~t~~~~~~~~~~~~~~~qvmyvPpGaP~p~ 161 (289)
T 1ncq_A 120 TYVRFDSEYTILATASQPDSANYSSNLVVQAMYVPPGAPNPK 161 (289)
T ss_dssp EEEEEEEEEEEEEEEECCSCCSSCCCCEEEEEEECTTSCCCC
T ss_pred eEEcccEEEEEEEcCCccCCcccCCceEEEEEEeCCCCCCCc
Confidence 6777777765 11 11 01223445899999999764
No 46
>1d4m_1 Protein (coxsackievirus A9); picornavirus structure, RGD, uncoating, virus-receptor interaction, WIN compound, virus/viral protein; HET: MYR W71; 2.90A {Human coxsackievirus A9} SCOP: b.121.4.1 PDB: 1h8t_A* 1upn_A 2c8i_A 1m11_1 2x5i_A* 3iyp_A*
Probab=22.20 E-value=98 Score=23.75 Aligned_cols=14 Identities=29% Similarity=0.373 Sum_probs=11.8
Q ss_pred EEEEEcCCCCChhh
Q 032158 93 FFIAWSPSTSRIRA 106 (146)
Q Consensus 93 vfI~w~P~~a~vk~ 106 (146)
.-|+|+|.+||+..
T Consensus 142 ~qvmyvPpGAP~p~ 155 (299)
T 1d4m_1 142 HQIMYVPPGGPIPA 155 (299)
T ss_dssp EEEEEECTTSCCCS
T ss_pred EEEEECCCCCCCCC
Confidence 45999999999765
No 47
>4b9w_A TDRD1, tudor domain-containing protein 1; replication; HET: 2MR; 2.10A {Mus musculus}
Probab=21.06 E-value=2.2e+02 Score=19.83 Aligned_cols=39 Identities=8% Similarity=-0.009 Sum_probs=29.2
Q ss_pred CcccCHHHHHHHHHHHhcCcceEEEEEEeCCccEEEEee
Q 032158 14 GMGVADHSKNAFTELQRKKVHRYVIFKIDEKKKEVVVEK 52 (146)
Q Consensus 14 Gi~vs~e~~~a~~~l~~~~~~~~vi~~i~~~~~~i~l~~ 52 (146)
+-.|++++.+.|+++-.++.....++.+..+.-.|.|-.
T Consensus 140 ~~~w~~ea~~~f~~l~~~k~l~~~V~~~~~~~~~V~L~d 178 (201)
T 4b9w_A 140 NKHWTKEATARFQACVVGLKLQARVVEITANGVGVELTD 178 (201)
T ss_dssp SSSCCHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHCCCEEEEEEEEEeCCEEEEEEEE
Confidence 446899999999999888766666777777654555544
No 48
>2eo2_A Adult MALE hypothalamus cDNA, riken FULL-length enriched library, clone:A230045M11...; FTHFSDC1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=20.65 E-value=35 Score=20.56 Aligned_cols=15 Identities=40% Similarity=0.700 Sum_probs=12.3
Q ss_pred EeCCcCCCCHHHHHh
Q 032158 129 QATDPTEMDLEELRN 143 (146)
Q Consensus 129 ~a~d~~dl~~~~i~~ 143 (146)
.-+||++|+++++..
T Consensus 43 ~ktdP~~LT~eEi~~ 57 (71)
T 2eo2_A 43 HKTDPSTLTEEEVRK 57 (71)
T ss_dssp CCCSTTTCCHHHHHH
T ss_pred CCCCcccCCHHHHhh
Confidence 347999999999864
Done!