Query 032159
Match_columns 146
No_of_seqs 138 out of 1138
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 16:47:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032159.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032159hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ayz_A UBC2, ubiquitin-conjuga 100.0 2.1E-50 7.3E-55 288.9 16.9 137 1-145 1-137 (169)
2 3rcz_B SUMO-conjugating enzyme 100.0 2.6E-50 8.8E-55 287.0 16.5 144 2-145 6-150 (163)
3 2ucz_A UBC7, ubiquitin conjuga 100.0 2.8E-50 9.7E-55 287.6 16.7 140 1-145 1-151 (165)
4 4gpr_A Ubiquitin-conjugating e 100.0 5.8E-50 2E-54 282.2 17.6 136 4-145 2-137 (151)
5 2aak_A UBC1, ubiquitin conjuga 100.0 5.2E-50 1.8E-54 282.8 17.0 137 1-145 1-137 (152)
6 2gjd_A Ubiquitin-conjugating e 100.0 4E-50 1.4E-54 284.7 16.4 143 1-145 1-144 (157)
7 2c2v_B Ubiquitin-conjugating e 100.0 1.6E-50 5.5E-55 285.9 13.8 137 3-145 2-138 (154)
8 1z2u_A Ubiquitin-conjugating e 100.0 6.4E-50 2.2E-54 281.8 16.7 137 3-145 1-137 (150)
9 1yh2_A HSPC150 protein similar 100.0 1.6E-49 5.6E-54 284.5 17.8 139 3-145 1-141 (169)
10 1zdn_A Ubiquitin-conjugating e 100.0 7.6E-50 2.6E-54 283.5 15.6 135 5-145 12-146 (158)
11 3h8k_A Ubiquitin-conjugating e 100.0 2.2E-49 7.5E-54 282.8 17.5 138 5-145 2-150 (164)
12 2ayv_A Ubiquitin-conjugating e 100.0 2.6E-49 9E-54 282.5 17.4 135 5-145 20-154 (166)
13 2grr_A Ubiquitin-conjugating e 100.0 2.3E-49 7.8E-54 281.8 16.8 143 1-145 4-147 (161)
14 1yrv_A Ubiquitin-conjugating l 100.0 6.1E-50 2.1E-54 286.5 13.8 137 5-145 22-159 (169)
15 2bep_A Ubiquitin-conjugating e 100.0 3.1E-49 1.1E-53 280.7 17.1 139 1-145 3-145 (159)
16 2c4o_A Ubiquitin-conjugating e 100.0 5E-49 1.7E-53 280.9 17.3 135 5-145 18-152 (165)
17 2e2c_A Ubiquitin conjugating e 100.0 5.2E-49 1.8E-53 278.7 16.2 134 5-145 8-141 (156)
18 2r0j_A Ubiquitin carrier prote 100.0 3E-49 1E-53 278.1 14.4 132 8-145 3-134 (149)
19 2awf_A Ubiquitin-conjugating e 100.0 4.5E-49 1.5E-53 282.9 14.6 139 4-145 15-165 (172)
20 1i7k_A Ubiquitin-conjugating e 100.0 6.9E-49 2.4E-53 283.1 14.7 134 5-145 29-162 (179)
21 1fxt_A Ubiquitin-conjugating e 100.0 8E-49 2.7E-53 275.9 13.8 134 7-145 2-136 (149)
22 3rz3_A Ubiquitin-conjugating e 100.0 2.9E-48 9.8E-53 281.2 17.0 136 1-140 3-149 (183)
23 1jat_A Ubiquitin-conjugating e 100.0 5.6E-49 1.9E-53 278.3 12.8 135 5-145 4-138 (155)
24 3k9o_A Ubiquitin-conjugating e 100.0 3E-48 1E-52 285.0 15.8 137 1-145 2-142 (201)
25 3bzh_A Ubiquitin-conjugating e 100.0 1E-47 3.5E-52 280.2 17.6 135 5-145 47-181 (194)
26 2f4z_A Tgtwinscan_2721 - E2 do 100.0 5.7E-48 1.9E-52 281.2 15.9 135 5-145 31-179 (193)
27 2pwq_A Ubiquitin conjugating e 100.0 3.1E-48 1E-52 286.9 14.6 135 5-145 22-157 (216)
28 1wzv_A Ubiquitin-conjugating e 100.0 9.6E-48 3.3E-52 272.0 15.1 133 6-145 4-138 (155)
29 2y9m_A Ubiquitin-conjugating e 100.0 1.8E-47 6.3E-52 274.5 15.9 139 1-145 1-155 (172)
30 3e46_A Ubiquitin-conjugating e 100.0 6.2E-47 2.1E-51 285.5 17.1 135 5-145 56-194 (253)
31 3fn1_B NEDD8-conjugating enzym 100.0 6.5E-47 2.2E-51 270.7 16.0 137 5-145 13-154 (167)
32 1tte_A Ubiquitin-conjugating e 100.0 1.1E-47 3.7E-52 283.8 11.6 135 6-145 2-137 (215)
33 1y8x_A Ubiquitin-conjugating e 100.0 5.7E-47 2E-51 269.1 14.7 132 5-145 5-137 (160)
34 2nvu_C NEDD8-conjugating enzym 100.0 1.3E-46 4.3E-51 271.7 14.4 133 4-145 24-157 (180)
35 1c4z_D UBCH7, ubiquitin conjug 100.0 9E-47 3.1E-51 266.7 11.3 134 7-145 3-136 (154)
36 2z5d_A Ubiquitin-conjugating e 100.0 9.1E-47 3.1E-51 271.8 10.1 135 1-145 20-156 (179)
37 2onu_A Ubiquitin-conjugating e 100.0 7.6E-47 2.6E-51 266.5 8.2 130 7-145 3-134 (152)
38 4ds2_A Ubiquitin-conjugating e 100.0 6E-46 2E-50 265.6 11.5 137 1-145 5-158 (167)
39 3o2u_A NEDD8-conjugating enzym 100.0 3.4E-45 1.2E-49 266.3 14.0 132 5-145 28-166 (190)
40 4ddg_A Ubiquitin-conjugating e 100.0 1.3E-44 4.5E-49 289.0 16.6 135 5-145 2-136 (399)
41 2q0v_A Ubiquitin-conjugating e 100.0 2.4E-45 8.2E-50 259.5 9.6 133 5-141 20-156 (156)
42 1yf9_A Ubiquitin carrier prote 100.0 2.7E-45 9.3E-50 262.8 9.9 130 6-145 12-143 (171)
43 1jat_B Ubiquitin-conjugating e 100.0 8.4E-45 2.9E-49 252.4 6.5 133 1-138 2-138 (138)
44 2a4d_A Ubiquitin-conjugating e 100.0 1.9E-43 6.6E-48 250.4 13.3 129 5-136 24-157 (160)
45 2fo3_A Ubiquitin-conjugating e 100.0 3E-43 1E-47 240.8 13.6 117 6-128 6-123 (125)
46 2h2y_A Ubiquitin-conjugating e 100.0 2.7E-42 9.3E-47 239.1 15.2 116 5-126 19-135 (136)
47 2hlw_A Ubiquitin-conjugating e 100.0 9.9E-43 3.4E-47 249.1 9.7 128 5-135 34-166 (170)
48 2a7l_A Hypothetical ubiquitin- 100.0 1.5E-41 5.3E-46 235.1 11.9 109 8-122 24-136 (136)
49 3ceg_A Baculoviral IAP repeat- 100.0 9.3E-41 3.2E-45 258.4 13.9 138 4-145 74-230 (323)
50 2f4w_A Ubiquitin-conjugating e 100.0 2.8E-38 9.4E-43 229.4 16.1 133 5-143 13-149 (187)
51 1zuo_A Hypothetical protein LO 100.0 1.6E-38 5.5E-43 230.3 8.1 119 4-127 25-159 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 1.1E-29 3.9E-34 178.0 1.3 115 8-140 34-161 (172)
53 3r3q_A Suppressor protein STP2 99.8 6.3E-21 2.2E-25 134.6 9.4 114 8-128 30-161 (162)
54 3kpa_A Probable ubiquitin fold 99.7 5.6E-19 1.9E-23 121.4 2.7 87 6-107 34-131 (168)
55 3obq_A Tumor susceptibility ge 99.6 1.9E-15 6.6E-20 104.8 9.9 104 11-123 25-138 (146)
56 2ebm_A RWD domain-containing p 96.7 0.011 3.9E-07 39.1 8.4 68 7-80 11-78 (128)
57 2day_A Ring finger protein 25; 96.1 0.057 1.9E-06 35.6 8.8 70 9-80 11-82 (128)
58 3zqs_A E3 ubiquitin-protein li 95.9 0.049 1.7E-06 38.8 8.2 83 9-121 4-86 (186)
59 2yz0_A Serine/threonine-protei 95.6 0.089 3.1E-06 35.1 8.4 71 9-80 13-85 (138)
60 2ebk_A RWD domain-containing p 95.4 0.045 1.5E-06 36.2 6.2 67 9-79 10-78 (128)
61 2daw_A RWD domain containing p 94.8 0.2 7E-06 34.2 8.2 24 58-81 76-99 (154)
62 1ukx_A GCN2, GCN2 EIF2alpha ki 93.8 0.5 1.7E-05 31.3 8.4 71 8-79 12-85 (137)
63 2dax_A Protein C21ORF6; RWD do 93.3 0.38 1.3E-05 32.7 7.1 25 57-81 73-97 (152)
64 3u3c_B Paxillin LD2 peptide; 4 56.1 9.7 0.00033 17.3 2.1 21 6-26 5-25 (26)
65 3rls_A YAF9, protein AF-9 homo 42.8 68 0.0023 22.2 5.8 43 37-81 30-72 (175)
66 3qrl_A Transcription initiatio 37.7 88 0.003 20.9 5.5 44 38-83 31-77 (140)
67 2f4m_B UV excision repair prot 32.8 19 0.00064 20.6 1.3 17 130-146 37-53 (61)
68 2jrw_A Cyclic extended PEP.1; 31.3 26 0.00087 15.9 1.4 17 70-86 4-20 (26)
69 1pve_A HHR23B, UV excision rep 29.3 21 0.0007 21.1 1.1 18 129-146 38-55 (72)
70 2rf4_B DNA-directed RNA polyme 28.6 26 0.00089 21.5 1.5 12 7-18 63-74 (87)
71 1m46_B IQ4, IQ4 motif from MYO 25.9 46 0.0016 15.0 1.7 13 7-19 9-21 (26)
72 2cwb_A Chimera of immunoglobul 25.7 15 0.0005 23.6 0.0 26 121-146 18-43 (108)
73 3pft_A Flavin reductase; desul 25.4 29 0.00099 23.2 1.5 30 71-100 42-74 (157)
74 3g9r_A Fusion complex of HIV-1 24.6 58 0.002 16.7 2.2 14 6-19 28-41 (42)
No 1
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=2.1e-50 Score=288.95 Aligned_cols=137 Identities=42% Similarity=0.784 Sum_probs=132.5
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeecc
Q 032159 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (146)
Q Consensus 1 ms~~~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (146)
|| +.+.+||++||++|+++++.|+.+.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 1 Ms--~~a~~RL~kEl~~l~~~~~~gi~~~p~~----~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t 74 (169)
T 1ayz_A 1 MS--TPARRRLMRDFKRMKEDAPPGVSASPLP----DNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLS 74 (169)
T ss_dssp -C--CHHHHHHHHHHHHHHHSCCTTEEEEEET----TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred CC--hHHHHHHHHHHHHHHhCCCCCEEEEecC----CccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCcccccc
Confidence 77 7899999999999999999999999886 89999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 81 GFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 81 ~i~HpnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
++|||||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 75 ~i~HPNI~~~G~ICl~iL~~--~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y 137 (169)
T 1ayz_A 75 EMFHPNVYANGEICLDILQN--RWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQY 137 (169)
T ss_dssp CCCCTTBCTTSBBCCGGGTT--TCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHH
T ss_pred CCccCCCCCCCeEeehhhcc--CCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHH
Confidence 99999999999999999987 8999999999999999999999999999999999999999988
No 2
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-50 Score=287.02 Aligned_cols=144 Identities=58% Similarity=1.124 Sum_probs=134.2
Q ss_pred CcchHHHHHHHHHHHHHHHcCCCCeEEeecCC-CCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeecc
Q 032159 2 SGGGIARGRLTEERKAWRKNHPHGFVAKPETK-DGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (146)
Q Consensus 2 s~~~~~~~Rl~~El~~l~~~~~~~~~~~~~~~-~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (146)
+||..|.+||+|||++|++++++|+++.+..+ |+..|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 6 ~~~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t 85 (163)
T 3rcz_B 6 HHSSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTP 85 (163)
T ss_dssp ---CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeC
Confidence 36788999999999999999999999998864 33349999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 81 GFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 81 ~i~HpnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
++|||||+.+|+||+++|..+++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 86 ~i~HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y 150 (163)
T 3rcz_B 86 PLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEY 150 (163)
T ss_dssp CCCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHH
T ss_pred CCccCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHH
Confidence 99999999999999999987557999999999999999999999999999999999999999988
No 3
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=2.8e-50 Score=287.61 Aligned_cols=140 Identities=38% Similarity=0.745 Sum_probs=131.9
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeecc
Q 032159 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (146)
Q Consensus 1 ms~~~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (146)
|| +.|.+||++||++|+++++.|+++.+..+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 1 M~--~~a~~RL~kEl~~l~~~~~~gi~~~~~~~---~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t 75 (165)
T 2ucz_A 1 MS--KTAQKRLLKELQQLIKDSPPGIVAGPKSE---NNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTP 75 (165)
T ss_dssp -C--HHHHHHHHHHHHHHHHSCCTTEEEEESSS---SCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred CC--hHHHHHHHHHHHHHHhCCCCCEEEEECCC---CCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeC
Confidence 77 88999999999999999999999988653 69999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCcEEecCCCC-----------CCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 81 GFFHPNVYPSGTVCLSILNE-----------DNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 81 ~i~HpnV~~~G~icl~~l~~-----------~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
++|||||+.+|+||+++|.. .++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 76 ~i~HPNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y 151 (165)
T 2ucz_A 76 SILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEF 151 (165)
T ss_dssp CCSCTTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHH
T ss_pred CCccCCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHH
Confidence 99999999999999999931 238999999999999999999999999999999999999999988
No 4
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=5.8e-50 Score=282.25 Aligned_cols=136 Identities=31% Similarity=0.655 Sum_probs=132.2
Q ss_pred chHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCcc
Q 032159 4 GGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFF 83 (146)
Q Consensus 4 ~~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 83 (146)
++.|.+||++|+++++++++.|+++.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~~----~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 77 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPVG----DDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVY 77 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESS----SCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEcC----CCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcc
Confidence 36799999999999999999999999977 79999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 84 HPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 84 HpnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
||||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 78 HPnv~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f 137 (151)
T 4gpr_A 78 HPNINKNGVICLDILKD--QWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQF 137 (151)
T ss_dssp BTTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHH
T ss_pred cceECCCCEEEcccccC--CCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHH
Confidence 99999999999999987 8999999999999999999999999999999999999999988
No 5
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=5.2e-50 Score=282.80 Aligned_cols=137 Identities=41% Similarity=0.829 Sum_probs=133.1
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeecc
Q 032159 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (146)
Q Consensus 1 ms~~~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (146)
|| +.+.+||++|+++++++++.|+.+.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 1 Ms--~~a~~RL~~E~~~l~~~~~~~i~~~~~~----~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 74 (152)
T 2aak_A 1 MS--TPARKRLMRDFKRLQQDPPAGISGAPQD----NNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVS 74 (152)
T ss_dssp CC--CHHHHHHHHHHHHHHHSCCTTEEEEEET----TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred CC--hHHHHHHHHHHHHHHhCCCCCEEEEeCC----CCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEec
Confidence 77 7899999999999999999999998876 79999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 81 GFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 81 ~i~HpnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
++|||||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 75 ~i~HPnv~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y 137 (152)
T 2aak_A 75 RMFHPNIYADGSICLDILQN--QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREY 137 (152)
T ss_dssp CCCCTTBCTTSBBCCGGGTT--SCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHH
T ss_pred CcccCCCCCCCEEechhhcC--CCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHH
Confidence 99999999999999999987 8999999999999999999999999999999999999999988
No 6
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=4e-50 Score=284.72 Aligned_cols=143 Identities=61% Similarity=1.150 Sum_probs=133.6
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCeEEeecCC-CCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeec
Q 032159 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETK-DGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFP 79 (146)
Q Consensus 1 ms~~~~~~~Rl~~El~~l~~~~~~~~~~~~~~~-~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 79 (146)
|| +.+.+||++|+++++++++.|+++.+... ++.+|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.
T Consensus 1 Ms--~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 78 (157)
T 2gjd_A 1 MS--SLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFP 78 (157)
T ss_dssp ----CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECC
T ss_pred CC--hHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeecc
Confidence 67 78999999999999999999999988753 3335999999999999999999999999999999999999999999
Q ss_pred cCccccccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 80 QGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 80 t~i~HpnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|++|||||+.+|+||+++|...++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 79 t~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y 144 (157)
T 2gjd_A 79 AGFYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEY 144 (157)
T ss_dssp TTCCCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHH
T ss_pred CCCccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHH
Confidence 999999999999999999987557999999999999999999999999999999999999999988
No 7
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-50 Score=285.89 Aligned_cols=137 Identities=32% Similarity=0.617 Sum_probs=130.5
Q ss_pred cchHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCc
Q 032159 3 GGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGF 82 (146)
Q Consensus 3 ~~~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i 82 (146)
||..+.+||++||++|+++++.|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 2 ~s~~~~~RL~kEl~~l~~~~~~~i~~~~~~----~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 77 (154)
T 2c2v_B 2 GSAGLPRRIIKETQRLLAEPVPGIKAEPDE----SNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKI 77 (154)
T ss_dssp CSCSCCHHHHHHHHHHHHSCCTTEEEEECS----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCC
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEECC----CchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCc
Confidence 447789999999999999999999999877 7999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 83 FHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 83 ~HpnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|||||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 78 ~HPnv~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f 138 (154)
T 2c2v_B 78 YHPNVDKLGRICLDILKD--KWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQA 138 (154)
T ss_dssp CCTTBCTTCBBCCHHHHT--SCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHH
T ss_pred ccCcCccCCeEEchhccC--CCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHH
Confidence 999999999999999986 8999999999999999999999999999999999999999988
No 8
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=6.4e-50 Score=281.78 Aligned_cols=137 Identities=34% Similarity=0.673 Sum_probs=132.8
Q ss_pred cchHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCc
Q 032159 3 GGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGF 82 (146)
Q Consensus 3 ~~~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i 82 (146)
||..+.+||++|+++|+++++.|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 1 ~s~~~~~RL~kEl~~l~~~~~~~~~~~~~~----~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 76 (150)
T 1z2u_A 1 GSHMALKRIQKELQDLGRDPPAQCSAGPVG----DDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI 76 (150)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCSSEEEEEET----TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred CchHHHHHHHHHHHHHHhCCCCCEEEEECC----CcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCc
Confidence 567899999999999999999999999877 7999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 83 FHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 83 ~HpnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|||||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 77 ~HPnv~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f 137 (150)
T 1z2u_A 77 YHPNINSNGSICLDILRS--QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERY 137 (150)
T ss_dssp CBTTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHH
T ss_pred ccCcCCCCCeEeeccccC--CCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHH
Confidence 999999999999999997 8999999999999999999999999999999999999999988
No 9
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-49 Score=284.54 Aligned_cols=139 Identities=29% Similarity=0.537 Sum_probs=132.7
Q ss_pred cchHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCc
Q 032159 3 GGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGF 82 (146)
Q Consensus 3 ~~~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i 82 (146)
||..+.+||++||++|+++++.|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 1 gs~~~~~RL~kEl~~l~~~~~~gi~~~~~~----~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i 76 (169)
T 1yh2_A 1 GSMQRASRLKRELHMLATEPPPGITCWQDK----DQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPI 76 (169)
T ss_dssp CCHHHHHHHHHHHHHHHHSCCTTEEEEESS----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred CchHHHHHHHHHHHHHHhCCCCCEEEEeCC----CchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCC
Confidence 567899999999999999999999999877 8999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCcEEecCCCC--CCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 83 FHPNVYPSGTVCLSILNE--DNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 83 ~HpnV~~~G~icl~~l~~--~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|||||+.+|+||+++|.. .++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 77 ~HPNv~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y 141 (169)
T 1yh2_A 77 YHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAF 141 (169)
T ss_dssp CBTTBCTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHH
T ss_pred ccccCCcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHH
Confidence 999999999999999981 128999999999999999999999999999999999999999987
No 10
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.6e-50 Score=283.52 Aligned_cols=135 Identities=27% Similarity=0.553 Sum_probs=131.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCccc
Q 032159 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (146)
..+.+||++||++|+++++.|+++.+.+ +|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||
T Consensus 12 ~~~~~RL~kEl~~l~~~~~~gi~~~~~~----~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 87 (158)
T 1zdn_A 12 PHIIRLVYKEVTTLTADPPDGIKVFPNE----EDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFH 87 (158)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEECS----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECC----CChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCccc
Confidence 7789999999999999999999999876 899999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 85 PNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 85 pnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 88 Pnv~~~G~iCl~iL~~--~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f 146 (158)
T 1zdn_A 88 PNVGANGEICVNVLKR--DWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEY 146 (158)
T ss_dssp TTBCTTSBBCHHHHTT--TCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHH
T ss_pred CCCCCCCEEehhhcCC--CCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHH
Confidence 9999999999999987 8999999999999999999999999999999999999999988
No 11
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=2.2e-49 Score=282.78 Aligned_cols=138 Identities=39% Similarity=0.706 Sum_probs=131.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCccc
Q 032159 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (146)
+.|.+||++||++++++++.|+++.+..+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~---~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNE---ENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFH 78 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESST---TCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCC---CCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCcc
Confidence 57899999999999999999999988763 599999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcEEecCCCC-----------CCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 85 PNVYPSGTVCLSILNE-----------DNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 85 pnV~~~G~icl~~l~~-----------~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|||+.+|+||+++|.. .++|+|++||.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 79 PNV~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f 150 (164)
T 3h8k_A 79 PNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQF 150 (164)
T ss_dssp TTBCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHH
T ss_pred CCCCCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHH
Confidence 9999999999999972 138999999999999999999999999999999999999999988
No 12
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-49 Score=282.54 Aligned_cols=135 Identities=33% Similarity=0.677 Sum_probs=131.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCccc
Q 032159 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (146)
+.+.+||++|+++|+++++.|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~gi~~~~~~----~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 95 (166)
T 2ayv_A 20 QGALKRINKELNDLSKDPPTNCSAGPVG----DDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYH 95 (166)
T ss_dssp TTHHHHHHHHHHHHHHSCCTTEEEEECS----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcC----CCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcC
Confidence 5689999999999999999999999876 799999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 85 PNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 85 pnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 96 PNI~~~G~ICL~iL~~--~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f 154 (166)
T 2ayv_A 96 PNINSQGAICLDILKD--QWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRY 154 (166)
T ss_dssp TTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHH
T ss_pred CcCCCCCeEEcccccc--cCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHH
Confidence 9999999999999997 8999999999999999999999999999999999999999988
No 13
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=2.3e-49 Score=281.85 Aligned_cols=143 Identities=64% Similarity=1.207 Sum_probs=134.4
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCeEEeecCC-CCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeec
Q 032159 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETK-DGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFP 79 (146)
Q Consensus 1 ms~~~~~~~Rl~~El~~l~~~~~~~~~~~~~~~-~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 79 (146)
|+ +.+.+||++|+++|+++++.|+.+.+... ++.+|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.
T Consensus 4 M~--~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 81 (161)
T 2grr_A 4 MS--GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFE 81 (161)
T ss_dssp CC--HHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred cc--HHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEe
Confidence 55 78999999999999999999999988643 3347999999999999999999999999999999999999999999
Q ss_pred cCccccccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 80 QGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 80 t~i~HpnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|++|||||+.+|+||+++|...++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 82 t~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y 147 (161)
T 2grr_A 82 PPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEY 147 (161)
T ss_dssp SCCCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHH
T ss_pred cCcccCCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHH
Confidence 999999999999999999986457999999999999999999999999999999999999999988
No 14
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.1e-50 Score=286.48 Aligned_cols=137 Identities=29% Similarity=0.544 Sum_probs=131.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCccc
Q 032159 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (146)
+.+.+||++|+++|+++++.|+.+.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 22 ~~a~~RL~kEl~~l~~~~~~gi~~~p~~----~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 97 (169)
T 1yrv_A 22 GRAYLLLHRDFCDLKENNYKGITAKPVS----EDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFH 97 (169)
T ss_dssp CHHHHHHHHHHHHHHHHCCTTEEEEECS----TTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEEcC----CccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCcc
Confidence 7899999999999999999999999877 799999999999999999999999999999999999999999999999
Q ss_pred ccc-CCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 85 PNV-YPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 85 pnV-~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
||| +.+|+||+++|...++|+|+++|.+||.+|+++|.+|++++|+|.|||++|++|+++|
T Consensus 98 PNI~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y 159 (169)
T 1yrv_A 98 PNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLY 159 (169)
T ss_dssp TTBCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHH
T ss_pred CcccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHH
Confidence 999 7899999999982128999999999999999999999999999999999999999988
No 15
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=3.1e-49 Score=280.68 Aligned_cols=139 Identities=30% Similarity=0.519 Sum_probs=131.7
Q ss_pred CCcchHHHHHHHHHHHHHHHc---CCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeee
Q 032159 1 MSGGGIARGRLTEERKAWRKN---HPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCK 77 (146)
Q Consensus 1 ms~~~~~~~Rl~~El~~l~~~---~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~ 77 (146)
|+|++.+.+||++|+++|+++ ++.++++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+
T Consensus 3 ~~Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~----~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~ 78 (159)
T 2bep_A 3 MAMANIAVQRIKREFKEVLKSEETSKNQIKVDLVD----ENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVR 78 (159)
T ss_dssp -CCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECS----SSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEE
T ss_pred ccchHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCC----CchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEE
Confidence 555588999999999999884 57899999877 79999999999999999999999999999999999999999
Q ss_pred eccCccccccC-CCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 78 FPQGFFHPNVY-PSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 78 f~t~i~HpnV~-~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|.|++|||||+ .+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 79 f~t~i~HPni~~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (159)
T 2bep_A 79 FITKIWHPNISSVTGAICLDILKD--QWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMF 145 (159)
T ss_dssp ESSCCCBTTBCTTTCBBCCGGGTT--TCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHH
T ss_pred eeCCCCccCCCCCCCEEeChhhhc--cCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHH
Confidence 99999999999 599999999987 8999999999999999999999999999999999999999988
No 16
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=5e-49 Score=280.92 Aligned_cols=135 Identities=33% Similarity=0.664 Sum_probs=131.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCccc
Q 032159 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (146)
+.+.+||++|+++++++++.|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 18 ~~~~~RL~kEl~~l~~~~~~gi~~~p~~----~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~H 93 (165)
T 2c4o_A 18 SMALKRIHKELNDLARDPPAQCSAGPVG----DDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 93 (165)
T ss_dssp HHHHHHHHHHHHHHHSSCCTTEEEEESS----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcC----CCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcC
Confidence 5689999999999999999999999876 799999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 85 PNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 85 pnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 94 PnV~~~G~ICl~iL~~--~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y 152 (165)
T 2c4o_A 94 PNINSNGSICLDILRS--QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKY 152 (165)
T ss_dssp TTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHH
T ss_pred CcCCCCCeEeehhhcC--CCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHH
Confidence 9999999999999997 8999999999999999999999999999999999999999988
No 17
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=5.2e-49 Score=278.72 Aligned_cols=134 Identities=34% Similarity=0.600 Sum_probs=129.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCccc
Q 032159 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (146)
+.+.+||++|+++|+++++.|+++.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 8 ~~~~~RL~kEl~~l~~~~~~~i~~~p~~----~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 83 (156)
T 2e2c_A 8 HSVSKRLQQELRTLLMSGDPGITAFPDG----DNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWH 83 (156)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTEEEEESS----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEECC----CCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCccc
Confidence 4689999999999999999999998876 799999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 85 PNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 85 pnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++| +|+++|
T Consensus 84 Pnv~~~G~iCl~iL~~--~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y 141 (156)
T 2e2c_A 84 PNVDQSGNICLDILKE--NWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEY 141 (156)
T ss_dssp TTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHH
T ss_pred CCCccCceEECccccc--cCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHH
Confidence 9999999999999987 899999999999999999999999999999999999 899887
No 18
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=3e-49 Score=278.06 Aligned_cols=132 Identities=35% Similarity=0.688 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCcccccc
Q 032159 8 RGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNV 87 (146)
Q Consensus 8 ~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV 87 (146)
.+||++|+++++++++.|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~~~~~~----~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 78 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIMAVPVP----ENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNI 78 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEEET----TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECC----CcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCC
Confidence 5899999999999999999999877 799999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 88 YPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 88 ~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 79 ~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 134 (149)
T 2r0j_A 79 DKLGRICLDILKD--KWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDA 134 (149)
T ss_dssp CTTCBBCCGGGTT--TCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHH
T ss_pred CCCCEEechhcCC--CCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHH
Confidence 9999999999987 8999999999999999999999999999999999999999988
No 19
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=4.5e-49 Score=282.86 Aligned_cols=139 Identities=35% Similarity=0.579 Sum_probs=111.1
Q ss_pred chHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCcc
Q 032159 4 GGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFF 83 (146)
Q Consensus 4 ~~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 83 (146)
++.+.+||+|||++|+++++.|+++.+..+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 15 ~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~---~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~ 91 (172)
T 2awf_A 15 VPRGSLLLRRQLAELNKNPVEGFSAGLIDD---NDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIW 91 (172)
T ss_dssp CCTTHHHHHHHHHHHHHSCCTTEEEEESST---TCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCC
T ss_pred hHHHHHHHHHHHHHHHhCCCCCEEEEECCC---ccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCc
Confidence 467899999999999999999999988653 69999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCcEEecCCCC-----------CCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHh-hh
Q 032159 84 HPNVYPSGTVCLSILNE-----------DNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLY-WF 145 (146)
Q Consensus 84 HpnV~~~G~icl~~l~~-----------~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~-~f 145 (146)
||||+.+|+||+++|.. .++|+|+++|.+||.+|+++|.+|++++|+|.|||++|++|++ +|
T Consensus 92 HPNV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f 165 (172)
T 2awf_A 92 HPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEF 165 (172)
T ss_dssp CTTBCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC----------------------
T ss_pred cCCCCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHH
Confidence 99999999999999972 1389999999999999999999999999999999999999999 87
No 20
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.9e-49 Score=283.14 Aligned_cols=134 Identities=35% Similarity=0.562 Sum_probs=129.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCccc
Q 032159 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (146)
+.+.+||++||++|+++++.|+++.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 29 ~~~~~RL~kEl~~l~~~~~~gi~~~p~~----~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 104 (179)
T 1i7k_A 29 GPVGKRLQQELMTLMMSGDKGISAFPES----DNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYH 104 (179)
T ss_dssp -CHHHHHHHHHHHHHHHCCTTEEEEEET----TEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCS
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEEcC----CcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCcc
Confidence 6789999999999999999999999876 799999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 85 PNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 85 pnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++| +|+++|
T Consensus 105 PNV~~~G~ICL~iL~~--~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f 162 (179)
T 1i7k_A 105 PNVDTQGNISLDILKE--KWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAF 162 (179)
T ss_dssp TTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHH
T ss_pred CccccCCeEEcccCcC--cCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHH
Confidence 9999999999999987 899999999999999999999999999999999999 999887
No 21
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=8e-49 Score=275.90 Aligned_cols=134 Identities=30% Similarity=0.589 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCccccc
Q 032159 7 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPN 86 (146)
Q Consensus 7 ~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 86 (146)
+.+||++|+++++++++.|+++.+.+. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~---~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 78 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSE---SDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPN 78 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSS---SCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCC---CCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCC
Confidence 379999999999999999999998772 49999999999999999999999999999999999999999999999999
Q ss_pred cCC-CCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 87 VYP-SGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 87 V~~-~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|+. +|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 79 i~~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f 136 (149)
T 1fxt_A 79 ISSVTGAICLDILKN--AWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESF 136 (149)
T ss_dssp BCSSSCCBCCHHHHT--SCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHH
T ss_pred CcCCCCeEeCCcCCC--CCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHH
Confidence 998 99999999987 8999999999999999999999999999999999999999987
No 22
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=2.9e-48 Score=281.23 Aligned_cols=136 Identities=35% Similarity=0.661 Sum_probs=124.9
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeecc
Q 032159 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (146)
Q Consensus 1 ms~~~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (146)
|++ +.+.|||++||++|+++++.|+++.+..+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 3 m~~-~~a~kRL~kEl~~l~~~~~~gi~~~~~~~---~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 78 (183)
T 3rz3_A 3 MGS-PSSQKALLLELKGLQEEPVEGFRVTLVDE---GDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLT 78 (183)
T ss_dssp --C-CHHHHHHHHHHHHHHHSCCTTEEEEECTT---CCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred Ccc-hHHHHHHHHHHHHHHhCCCCCEEEEecCc---cchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecC
Confidence 453 57899999999999999999999984432 79999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCcEEecCCCC-----------CCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHH
Q 032159 81 GFFHPNVYPSGTVCLSILNE-----------DNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQ 140 (146)
Q Consensus 81 ~i~HpnV~~~G~icl~~l~~-----------~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~ 140 (146)
++|||||+.+|+||+++|.. .++|+|+++|.+||.+|+++|.+||+++|+|.|||++|++
T Consensus 79 ~i~HPnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~ 149 (183)
T 3rz3_A 79 KMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRK 149 (183)
T ss_dssp CCCCTTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHH
T ss_pred CCccCCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHh
Confidence 99999999999999999972 1389999999999999999999999999999999999998
No 23
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=5.6e-49 Score=278.30 Aligned_cols=135 Identities=32% Similarity=0.620 Sum_probs=130.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCccc
Q 032159 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (146)
+.+.+||++|+++|+++++.|+++.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 4 ~~~~~RL~kE~~~l~~~~~~~i~~~~~~----~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 79 (155)
T 1jat_A 4 ASLPKRIIKETEKLVSDPVPGITAEPHD----DNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYH 79 (155)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEEET----TEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCB
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECC----CchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeeccccc
Confidence 3568999999999999999999999877 799999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 85 PNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 85 pnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 80 Pnv~~~G~iCl~iL~~--~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 138 (155)
T 1jat_A 80 PNIDRLGRICLDVLKT--NWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGA 138 (155)
T ss_dssp TTBCTTCCBCCGGGTT--TCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHH
T ss_pred CCCCCCCEEEchhhcc--CCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHH
Confidence 9999999999999987 8999999999999999999999999999999999999999988
No 24
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=3e-48 Score=284.95 Aligned_cols=137 Identities=31% Similarity=0.534 Sum_probs=129.8
Q ss_pred CCcchHHHHHHHHHHHHHHHc---CCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeee
Q 032159 1 MSGGGIARGRLTEERKAWRKN---HPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCK 77 (146)
Q Consensus 1 ms~~~~~~~Rl~~El~~l~~~---~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~ 77 (146)
|| +.|.+||++||++|+++ ++.|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+
T Consensus 2 Ms--~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~----~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~ 75 (201)
T 3k9o_A 2 MA--NIAVQRIKREFKEVLKSEETSKNQIKVDLVD----ENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVR 75 (201)
T ss_dssp ----CTTHHHHHHHHHHHHTCHHHHTTSEEEEECS----TTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEE
T ss_pred Cc--HHHHHHHHHHHHHHHhCCCCCCCCEEEEECC----CCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccc
Confidence 66 78999999999999886 36899999987 79999999999999999999999999999999999999999
Q ss_pred eccCccccccC-CCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 78 FPQGFFHPNVY-PSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 78 f~t~i~HpnV~-~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|.|++|||||+ .+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 76 f~t~i~HPnv~~~~G~iCl~iL~~--~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f 142 (201)
T 3k9o_A 76 FITKIWHPNISSVTGAICLDILKD--QWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMF 142 (201)
T ss_dssp ESSCCCBTTBCTTTCBBCCGGGTT--TCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHH
T ss_pred cccCcccCCCcCCCCeeeCccccc--CCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHH
Confidence 99999999999 499999999987 8999999999999999999999999999999999999999988
No 25
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1e-47 Score=280.19 Aligned_cols=135 Identities=32% Similarity=0.595 Sum_probs=130.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCccc
Q 032159 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (146)
+.+.+||++||++|+++++.|+.+.+.. +|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++||
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~----~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 122 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKG----DNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYH 122 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESS----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeeccc----CccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCcc
Confidence 4578999999999999999999999877 899999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 85 PNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 85 pnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 123 PNV~~~G~ICL~iL~~--~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f 181 (194)
T 3bzh_A 123 CNINSQGVICLDILKD--NWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEH 181 (194)
T ss_dssp TTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHH
T ss_pred ceECCCCceechhhhc--cCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHH
Confidence 9999999999999987 8999999999999999999999999999999999999999988
No 26
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=5.7e-48 Score=281.22 Aligned_cols=135 Identities=34% Similarity=0.666 Sum_probs=126.9
Q ss_pred hHHHHHHHHHHHHHHHcCC-------------CCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCC
Q 032159 5 GIARGRLTEERKAWRKNHP-------------HGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPS 71 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~~~-------------~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~ 71 (146)
..+.+||++||++|+++++ .|+.+.+.+ +|+++|+++|.||++|||+||.|+++|.||++||+
T Consensus 31 ~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~----~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~ 106 (193)
T 2f4z_A 31 PREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVG----GDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPY 106 (193)
T ss_dssp -CHHHHHHHHHHHHHHC----------------CEEEEEET----TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcC----CCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCC
Confidence 4578999999999999876 799999877 79999999999999999999999999999999999
Q ss_pred CCCeeeeccCccccccC-CCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 72 KPPKCKFPQGFFHPNVY-PSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 72 ~pP~v~f~t~i~HpnV~-~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
+||+|+|.|+||||||+ .+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 107 ~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~--~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~f 179 (193)
T 2f4z_A 107 NPPKMKFVTKIWHPNISSQTGAICLDILKH--EWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPLF 179 (193)
T ss_dssp SCCEEEESSCCCBTTBCTTTCBBCCGGGTT--TCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHH
T ss_pred CCCeEEEecCCccCCCcCCCCEEECccccc--cCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHH
Confidence 99999999999999999 599999999988 8999999999999999999999999999999999999999988
No 27
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=3.1e-48 Score=286.88 Aligned_cols=135 Identities=33% Similarity=0.657 Sum_probs=130.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCccc
Q 032159 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (146)
+.+.+||++||++|+++++.|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 22 s~a~~RL~kEl~~l~~~~~~gi~~~p~~----~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~H 97 (216)
T 2pwq_A 22 SKELLRLQKELKDIENENVQEIDAHIKD----SNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWH 97 (216)
T ss_dssp CHHHHHHHHHHHHHHHSCTTTEEEEECS----SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEcC----CccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcC
Confidence 6789999999999999999999999987 799999999999999999999999999999999999999999999999
Q ss_pred cccC-CCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 85 PNVY-PSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 85 pnV~-~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|||+ .+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 98 PNI~~~~G~ICL~iL~~--~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f 157 (216)
T 2pwq_A 98 PNISSQTGAICLDVLKN--EWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALF 157 (216)
T ss_dssp TTBCTTTCBBCCHHHHH--HCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHH
T ss_pred CCCcCCCCEEEchhhcc--cCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHH
Confidence 9999 599999999987 8999999999999999999999999999999999999999987
No 28
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=9.6e-48 Score=272.00 Aligned_cols=133 Identities=29% Similarity=0.575 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEE-eecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCccc
Q 032159 6 IARGRLTEERKAWRKNHPHGFVA-KPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (146)
Q Consensus 6 ~~~~Rl~~El~~l~~~~~~~~~~-~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (146)
.+.+||++|+++|+++++.|+.+ .+.+ +|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~----~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDD----ANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYH 78 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECS----SCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCC----CchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCcc
Confidence 47899999999999999999999 6655 89999999999 999999999999999999999999999999999999
Q ss_pred cccCCCCcEEecCC-CCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 85 PNVYPSGTVCLSIL-NEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 85 pnV~~~G~icl~~l-~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|||+.+|+||+++| .+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 79 PnV~~~G~iCl~iL~~~--~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y 138 (155)
T 1wzv_A 79 PNVDENGQICLPIISSE--NWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELF 138 (155)
T ss_dssp TTBCTTCBCCCGGGCTT--TCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHH
T ss_pred CcCCCCCeEeecCCCcc--CCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHH
Confidence 99999999999999 55 8999999999999999999999999999999999999999988
No 29
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=1.8e-47 Score=274.54 Aligned_cols=139 Identities=27% Similarity=0.448 Sum_probs=126.3
Q ss_pred CCcchHHHHHHHHHHHHHHH-c-C------CC---CeEEee-cCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCC
Q 032159 1 MSGGGIARGRLTEERKAWRK-N-H------PH---GFVAKP-ETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSED 68 (146)
Q Consensus 1 ms~~~~~~~Rl~~El~~l~~-~-~------~~---~~~~~~-~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~ 68 (146)
|+|++.+.+||++||++|++ . + +. ++.+.+ .+ +|+++|+++|.||++|||+||.|+++|.||++
T Consensus 1 ~~Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~----~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~ 76 (172)
T 2y9m_A 1 GAMADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDE----TDLSKWEAIISGPSDTPYENHQFRILIEVPSS 76 (172)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESST----TCTTEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred CCCcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCC----CchhEEEEEEECCCCCcccCCEEEEEEECCCc
Confidence 55668999999999999998 4 3 33 456666 44 79999999999999999999999999999999
Q ss_pred CCCCCCeeeecc-CccccccC-CCCcEEecCCC-CCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHH-hHhh
Q 032159 69 YPSKPPKCKFPQ-GFFHPNVY-PSGTVCLSILN-EDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQ-VLYW 144 (146)
Q Consensus 69 YP~~pP~v~f~t-~i~HpnV~-~~G~icl~~l~-~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~-~~~~ 144 (146)
||++||+|+|.| ++|||||+ .+|+||+++|. + +|+|+++|.+||.+|+++|.+|++++|+|.|||++|++ |+++
T Consensus 77 YP~~PP~v~f~t~~i~HPni~~~~G~iCl~iL~~~--~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~ 154 (172)
T 2y9m_A 77 YPMNPPKISFMQNNILHCNVKSATGEICLNILKPE--EWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSA 154 (172)
T ss_dssp TTTSCCEEEECTTSCCCTTEETTTTEECCGGGSTT--TCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHH
T ss_pred CCCCCCEEEEeeCCeecCCCcCCCCEEeccccCCC--CCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHH
Confidence 999999999999 99999995 79999999998 5 89999999999999999999999999999999999999 9988
Q ss_pred h
Q 032159 145 F 145 (146)
Q Consensus 145 f 145 (146)
|
T Consensus 155 f 155 (172)
T 2y9m_A 155 Y 155 (172)
T ss_dssp H
T ss_pred H
Confidence 7
No 30
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=6.2e-47 Score=285.45 Aligned_cols=135 Identities=30% Similarity=0.529 Sum_probs=130.1
Q ss_pred hHHHHHHHHHHHHHHHc---CCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccC
Q 032159 5 GIARGRLTEERKAWRKN---HPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQG 81 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~---~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 81 (146)
+.+.+||++||++|+++ ++.|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 56 ~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~----dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~ 131 (253)
T 3e46_A 56 NIAVQRIKREFKEVLKSEETSKNQIKVDLVD----ENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK 131 (253)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHTTSEEEEECS----TTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCEEEEECC----CcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCC
Confidence 78999999999999886 47899999987 799999999999999999999999999999999999999999999
Q ss_pred ccccccC-CCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 82 FFHPNVY-PSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 82 i~HpnV~-~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
||||||+ .+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 132 i~HPNV~~~~G~ICL~iL~~--~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f 194 (253)
T 3e46_A 132 IWHPNISSVTGAICLDILKD--QWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMF 194 (253)
T ss_dssp CCBTTBCTTTCBBCCGGGTT--CCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHH
T ss_pred CccCCccCCCCeeecccccC--CCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHH
Confidence 9999999 599999999987 8999999999999999999999999999999999999999988
No 31
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=6.5e-47 Score=270.68 Aligned_cols=137 Identities=24% Similarity=0.429 Sum_probs=128.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCccc
Q 032159 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (146)
+.+.+||++||++|+++++.|+++.+... +|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 13 s~~~~RL~kEl~~l~~~~~~gi~~~~~~~---~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 88 (167)
T 3fn1_B 13 SVRDKLLVKEVAELEANLPCTCKVHFPDP---NKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWH 88 (167)
T ss_dssp CHHHHHHHHHHHHHGGGSCTTEEEECSSS---SCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCC---CcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCccc
Confidence 46899999999999999999999986543 7899999999 8999999999999999999999999999999999999
Q ss_pred cccCCCCcEEecCCCC----CCCCCccCcHHHHHHHHHHhhcC-CCCCCCCCHHHHHHHHHhHhhh
Q 032159 85 PNVYPSGTVCLSILNE----DNGWRPAITVKQILVGIQDLLDQ-PNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 85 pnV~~~G~icl~~l~~----~~~W~p~~~l~~vl~~i~~ll~~-p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|||+.+|+||+++|.. .++|+|+++|.+||.+|+++|.+ |++++|+|.|||++|++|+++|
T Consensus 89 Pnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f 154 (167)
T 3fn1_B 89 PNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDF 154 (167)
T ss_dssp SSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHH
T ss_pred CCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHH
Confidence 9999999999999975 24799999999999999999999 7999999999999999999988
No 32
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=1.1e-47 Score=283.78 Aligned_cols=135 Identities=30% Similarity=0.579 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCcccc
Q 032159 6 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHP 85 (146)
Q Consensus 6 ~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hp 85 (146)
.+.+||++|+++|++++++|+++.+... +++++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~---~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HP 78 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSE---SDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHP 78 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSS---SSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCS
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCC---ccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccC
Confidence 3689999999999999999999988762 4677999999999999999999999999999999999999999999999
Q ss_pred ccCC-CCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 86 NVYP-SGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 86 nV~~-~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
||+. +|+||+++|.+ +|+|++||.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 79 NI~~~~G~ICL~iL~~--~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f 137 (215)
T 1tte_A 79 NISSVTGAICLDILRN--AWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESF 137 (215)
T ss_dssp SSCSSSSCCCSSTTTC--CSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHH
T ss_pred cCcCCCCEEECccCCC--CCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHH
Confidence 9998 99999999987 8999999999999999999999999999999999999999988
No 33
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.7e-47 Score=269.13 Aligned_cols=132 Identities=28% Similarity=0.564 Sum_probs=125.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEe-ecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCcc
Q 032159 5 GIARGRLTEERKAWRKNHPHGFVAK-PETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFF 83 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 83 (146)
+.+.+||++|++++ ++++++++. +.. +|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~----~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 77 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKTCDISFSDP----DDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVY 77 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSST----TCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccC----CccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCc
Confidence 46899999999999 678899987 554 7999999998 899999999999999999999999999999999999
Q ss_pred ccccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 84 HPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 84 HpnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
||||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 78 HPnv~~~G~iCl~iL~~--~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f 137 (160)
T 1y8x_A 78 HPNIDLEGNVCLNILRE--DWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLF 137 (160)
T ss_dssp BTTBCTTCBBCCGGGTT--TCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHH
T ss_pred cCcCCCCCeEEcccchh--hccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHH
Confidence 99999999999999987 8999999999999999999999999999999999999999988
No 34
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-46 Score=271.74 Aligned_cols=133 Identities=27% Similarity=0.533 Sum_probs=126.7
Q ss_pred chHHHHHHHHHHHHHHHcCCCCeEEe-ecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCc
Q 032159 4 GGIARGRLTEERKAWRKNHPHGFVAK-PETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGF 82 (146)
Q Consensus 4 ~~~~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i 82 (146)
++.+.+||++||++| ++++|+++. +.+ +|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 24 ~~~~~~RL~kEl~~l--~~~~~i~~~~p~~----~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i 96 (180)
T 2nvu_C 24 ASAAQLRIQKDINEL--NLPKTCDISFSDP----DDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMV 96 (180)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSST----TCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCC
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEeccc----ccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccC
Confidence 367899999999999 678899987 554 7999999998 99999999999999999999999999999999999
Q ss_pred cccccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 83 FHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 83 ~HpnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|||||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 97 ~HPNV~~~G~iCl~iL~~--~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f 157 (180)
T 2nvu_C 97 YHPNIDLEGNVALNILRE--DWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLF 157 (180)
T ss_dssp CBTTBCTTSBBCCGGGTT--SCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHH
T ss_pred ccCCCCCCCcEEcccccc--cCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHH
Confidence 999999999999999987 8999999999999999999999999999999999999999988
No 35
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=9e-47 Score=266.75 Aligned_cols=134 Identities=28% Similarity=0.592 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCccccc
Q 032159 7 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPN 86 (146)
Q Consensus 7 ~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 86 (146)
|.+||++|+++|+++++.|+.+.+..+ +|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~---~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 78 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDE---ANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPN 78 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSC---SSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCC---CchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCcccc
Confidence 679999999999999999998655332 79999999998 99999999999999999999999999999999999999
Q ss_pred cCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 87 VYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 87 V~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|+.+|+||+++|.. ++|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 79 v~~~G~iCl~iL~~-~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 136 (154)
T 1c4z_D 79 IDEKGQVCLPVISA-ENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKF 136 (154)
T ss_dssp BCTTCBBCCTTTSS-SSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTT
T ss_pred CCCCCEEECCCCCC-CCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHH
Confidence 99999999999973 28999999999999999999999999999999999999999887
No 36
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.1e-47 Score=271.83 Aligned_cols=135 Identities=27% Similarity=0.485 Sum_probs=124.1
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeecc
Q 032159 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (146)
Q Consensus 1 ms~~~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (146)
|++.+.+.+||++||++|++ .|+++.+. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 20 ms~~~~a~~RL~kEl~~l~~---~g~~v~~~-----ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t 91 (179)
T 2z5d_A 20 MSSPSPGKRRMDTDVIKLIE---SKHEVTIL-----GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMN 91 (179)
T ss_dssp ---CCHHHHHHHHHHHHHHH---SSSCEEEE-----EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred CCCchHHHHHHHHHHHhcCc---CCCEEEEC-----CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEec
Confidence 55434689999999999985 47777774 36899999999999999999999999999999999999999999
Q ss_pred CccccccCC-CCcEEecCCCCCCCCCccCcHHHHHHH-HHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 81 GFFHPNVYP-SGTVCLSILNEDNGWRPAITVKQILVG-IQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 81 ~i~HpnV~~-~G~icl~~l~~~~~W~p~~~l~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
++|||||+. +|+||+++|.+ +|+|+++|.+||.+ |+++|.+|++++|+|.+||++|++|+++|
T Consensus 92 ~i~HPNV~~~~G~ICL~iL~~--~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y 156 (179)
T 2z5d_A 92 KIFHPNIDEASGTVCLDVINQ--TWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEY 156 (179)
T ss_dssp CCCBTTBCTTTCBBCHHHHHH--HCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHH
T ss_pred CCccCcCCCCCCeEecccccc--CCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHH
Confidence 999999998 99999999987 89999999999999 99999999999999999999999999988
No 37
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=7.6e-47 Score=266.45 Aligned_cols=130 Identities=26% Similarity=0.536 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCccccc
Q 032159 7 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPN 86 (146)
Q Consensus 7 ~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 86 (146)
|.+||++|+++++++ |+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 3 a~~Rl~kEl~~l~~~---~~~v~~~~----~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 75 (152)
T 2onu_A 3 SLTRKQCDFTKLIMA---GYDLELNN----GSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPN 75 (152)
T ss_dssp CCCHHHHTHHHHHHH---TCCEEEET----TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred HHHHHHHHHHhcCcC---CCEEEEcc----CccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCc
Confidence 579999999999875 67787776 79999999999999999999999999999999999999999999999999
Q ss_pred cCC-CCcEEecCCCCCCCCCccCcHHHHHHH-HHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 87 VYP-SGTVCLSILNEDNGWRPAITVKQILVG-IQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 87 V~~-~G~icl~~l~~~~~W~p~~~l~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|+. +|+||+++|.+ +|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|
T Consensus 76 i~~~~G~iCl~il~~--~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y 134 (152)
T 2onu_A 76 VDEASGSVCLDVINQ--TWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIY 134 (152)
T ss_dssp BCTTTCBBCHHHHHH--HCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHH
T ss_pred CcCcCCeEecccccc--cCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHH
Confidence 994 99999999987 89999999999998 68999999999999999999999999987
No 38
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=6e-46 Score=265.64 Aligned_cols=137 Identities=19% Similarity=0.416 Sum_probs=127.8
Q ss_pred CCcchHHHHHHHHHHHHHHHcC------------CCCeEEeecCCCCCCCccEEEEEEcCCCCCCCC--CCEEEEEEEeC
Q 032159 1 MSGGGIARGRLTEERKAWRKNH------------PHGFVAKPETKDGSVNLMIWECIIPGKTGTDWE--GGYFPLTLYFS 66 (146)
Q Consensus 1 ms~~~~~~~Rl~~El~~l~~~~------------~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~--gg~f~~~i~fp 66 (146)
|| +.+.+||++||++|++++ +.++.+.+.+ +|+++|+++|.||++|||+ ||.|+++|.||
T Consensus 5 Ms--~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~----~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp 78 (167)
T 4ds2_A 5 MK--NISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDT----DTIYNWILKVKAPADSVYGGAGNTYQLSVLFS 78 (167)
T ss_dssp CC--CCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEE----SSTTEEEEEEECCTTSGGGTTCCEEEEEEECC
T ss_pred cc--HHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCC----CcccEEEEEEECCCCCCccCCCCEEEEEEECC
Confidence 66 778999999999999977 6788998877 8999999999999999999 99999999999
Q ss_pred CCCCCCCCeeeeccCccccccCCCCcEEecCCCCCCCCCccCcHHHHH-HHHHHhhcC--CCCCCCCCHHHHHHHHHhHh
Q 032159 67 EDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQIL-VGIQDLLDQ--PNPADPAQTDGYQLFIQVLY 143 (146)
Q Consensus 67 ~~YP~~pP~v~f~t~i~HpnV~~~G~icl~~l~~~~~W~p~~~l~~vl-~~i~~ll~~--p~~~~p~n~~aa~~~~~~~~ 143 (146)
++||++||+|+|.|++|||||+.+|+||+++|.+ +|+|++++.++| ..|++++.+ |++++|+|.|||++|++|++
T Consensus 79 ~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~il~~--~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~ 156 (167)
T 4ds2_A 79 DDYPHEPPTVRFVTPVYSPLVTGEGGICDRMVND--FWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQ 156 (167)
T ss_dssp TTTTTSCCEEEESSCCCCSSCCTTSCCCTHHHHT--TCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHH
T ss_pred CCCCCCCCEEEEeCCcccccCCCCCEEEcccCcC--CCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHH
Confidence 9999999999999999999999999999999987 899999999975 467788864 89999999999999999999
Q ss_pred hh
Q 032159 144 WF 145 (146)
Q Consensus 144 ~f 145 (146)
+|
T Consensus 157 ~f 158 (167)
T 4ds2_A 157 DF 158 (167)
T ss_dssp HH
T ss_pred HH
Confidence 88
No 39
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=3.4e-45 Score=266.28 Aligned_cols=132 Identities=32% Similarity=0.550 Sum_probs=125.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEe----ecCCCCCCCcc---EEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeee
Q 032159 5 GIARGRLTEERKAWRKNHPHGFVAK----PETKDGSVNLM---IWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCK 77 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~~~~~~~~~----~~~~~~~~~~~---~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~ 77 (146)
+.|.+||++||++|+ .++++++. +.. +|++ +|+++|. |++|||+||.|+++|.||++||++||+|+
T Consensus 28 s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~----~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~ 100 (190)
T 3o2u_A 28 SAARIRLKRDLDSLD--LPPTVTLNVITSPDS----ADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVV 100 (190)
T ss_dssp CHHHHHHHHHHHTCC--CCTTEEEEEEECTTC----CCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEE
T ss_pred cHHHHHHHHHHHhcc--CCCCEEEEecCCCCC----ccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeE
Confidence 578999999999997 77899987 554 7999 9999998 78899999999999999999999999999
Q ss_pred eccCccccccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 78 FPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 78 f~t~i~HpnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|.|++|||||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 101 f~t~i~HPnV~~~G~iCl~iL~~--~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f 166 (190)
T 3o2u_A 101 CLKKIFHPNIDLKGNVCLNILRE--DWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEF 166 (190)
T ss_dssp ECSCCCCTTBCTTSBBCCGGGTT--TCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHH
T ss_pred EecCcccCCCCCCCeEechhccC--CCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHH
Confidence 99999999999999999999987 8999999999999999999999999999999999999999988
No 40
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=1.3e-44 Score=289.00 Aligned_cols=135 Identities=32% Similarity=0.636 Sum_probs=131.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCccc
Q 032159 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (146)
+.|.|||++|+++|++++++|+++.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~~----~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 77 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPVG----DDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 77 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEET----TEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcC----CcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccc
Confidence 5789999999999999999999999987 899999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 85 PNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 85 pnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
|||+.+|+||+++|.+ +|+|++|+.+||.+|+++|.+|++++|+|.+||++|++|+++|
T Consensus 78 Pnv~~~G~iCl~il~~--~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y 136 (399)
T 4ddg_A 78 PNINSNGSISLDILRS--QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKY 136 (399)
T ss_dssp TTBCTTCBBCCGGGTT--SCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHH
T ss_pred cccCCCCeEeCccccc--CCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHH
Confidence 9999999999999987 8999999999999999999999999999999999999999987
No 41
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=2.4e-45 Score=259.52 Aligned_cols=133 Identities=25% Similarity=0.423 Sum_probs=120.8
Q ss_pred hHHHHHHHHHHHHHHHc-CCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCcc
Q 032159 5 GIARGRLTEERKAWRKN-HPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFF 83 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~-~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 83 (146)
..+.+||++||++++++ ++.++++.+... +..|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~-~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~ 98 (156)
T 2q0v_A 20 VPRSFRLLDELERGQKGNVSEGVSFGLESA-DDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIE 98 (156)
T ss_dssp CCHHHHHHHHHHHHHCC-CCTTEEEEESST-TCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCCeEEEECCC-ccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccc
Confidence 45899999999999998 788999988542 1146999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCcE---EecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHh
Q 032159 84 HPNVYPSGTV---CLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQV 141 (146)
Q Consensus 84 HpnV~~~G~i---cl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~ 141 (146)
||||+.+|+| |+++|. +|+|+++|.+||.+|+++|.+|++++|+|++||++|++|
T Consensus 99 HPNV~~~G~icisCL~iL~---~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 99 MSCVDNCGRVIKNNLHILK---NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp CTTBCTTSBBCGGGSHHHH---TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred cCCCccCCeEehhhccccc---CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHhhhC
Confidence 9999999999 888886 499999999999999999999999999999999999876
No 42
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=2.7e-45 Score=262.83 Aligned_cols=130 Identities=27% Similarity=0.446 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCcccc
Q 032159 6 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHP 85 (146)
Q Consensus 6 ~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hp 85 (146)
.+.+||++|+++|++++. ++ +.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~----~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HP 83 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPS----DTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHP 83 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EEC----SSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBT
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCC----CCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccc
Confidence 467999999999998763 33 233 7999999999999999999999999999999999999999999999999
Q ss_pred ccC-CCCcEEecCCCCCCCCCccCcHHHHHHHH-HHhhcCCCCCCCCCHHHHHHHHHhHhhh
Q 032159 86 NVY-PSGTVCLSILNEDNGWRPAITVKQILVGI-QDLLDQPNPADPAQTDGYQLFIQVLYWF 145 (146)
Q Consensus 86 nV~-~~G~icl~~l~~~~~W~p~~~l~~vl~~i-~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (146)
||+ .+|+||+++|.+ +|+|+++|.+||.+| +++|.+|++++|+|.+||++|++|+++|
T Consensus 84 Ni~~~~G~iCl~iL~~--~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y 143 (171)
T 1yf9_A 84 NVDERSGSVCLDVINQ--TWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGF 143 (171)
T ss_dssp TBCTTTCBBCHHHHHH--HCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHH
T ss_pred cCcccCCeEecccccc--CCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHH
Confidence 999 599999999987 899999999999997 7999999999999999999999999987
No 43
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=8.4e-45 Score=252.36 Aligned_cols=133 Identities=24% Similarity=0.393 Sum_probs=117.5
Q ss_pred CCcchHHHHHHHHHHHHHHHc-CCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeec
Q 032159 1 MSGGGIARGRLTEERKAWRKN-HPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFP 79 (146)
Q Consensus 1 ms~~~~~~~Rl~~El~~l~~~-~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 79 (146)
||. ..+.+||++|+++++++ ++.++++.+... +..|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.
T Consensus 2 m~~-~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~-~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 79 (138)
T 1jat_B 2 MSK-VPRNFRLLEELEKGEKGFGPESCSYGLADS-DDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFI 79 (138)
T ss_dssp -CC-CCHHHHHHHHHHHHHC----CCEEEEESST-TCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred cch-HHHHHHHHHHHHHHHhcCCCCCEEEEeCCC-CCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEE
Confidence 662 46789999999999998 788999988542 113699999999999999999999999999999999999999999
Q ss_pred cCccccccCCC-CcE--EecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 032159 80 QGFFHPNVYPS-GTV--CLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLF 138 (146)
Q Consensus 80 t~i~HpnV~~~-G~i--cl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 138 (146)
|++|||||+.+ |+| |+++|. +|+|+++|.+||.+|+++|.+|++++|+|++||++|
T Consensus 80 t~i~HPnv~~~~G~i~~cL~~l~---~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 80 SKINLPCVNPTTGEVQTDFHTLR---DWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp BCCCCTTBCTTTCBBCTTSHHHH---TCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred cccccCCEeCCCCEEeeecccCC---CCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 99999999985 999 899885 599999999999999999999999999999998765
No 44
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=1.9e-43 Score=250.39 Aligned_cols=129 Identities=22% Similarity=0.343 Sum_probs=116.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCC-eEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCcc
Q 032159 5 GIARGRLTEERKAWRKNHPHG-FVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFF 83 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~~~~~-~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 83 (146)
..+.+||+|||++++++++++ +++.+..++ ..|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 24 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~-d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 102 (160)
T 2a4d_A 24 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDE-DMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKIN 102 (160)
T ss_dssp HHHHHHHHHHHHHHHSCCTTSSEEEEESSTT-CTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEEecCCc-cccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCce
Confidence 568999999999999998888 777764321 014999999999999999999999999999999999999999999999
Q ss_pred ccccC-CCCcEEecCCC--CCCCCCccCcHHHHHHHHHHhh-cCCCCCCCCCHHHHH
Q 032159 84 HPNVY-PSGTVCLSILN--EDNGWRPAITVKQILVGIQDLL-DQPNPADPAQTDGYQ 136 (146)
Q Consensus 84 HpnV~-~~G~icl~~l~--~~~~W~p~~~l~~vl~~i~~ll-~~p~~~~p~n~~aa~ 136 (146)
||||+ .+|+||+++|. + +|+|+++|++||.+|+++| .+||+++|+|.|||.
T Consensus 103 HPNV~~~~G~ICl~iL~~~~--~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa~ 157 (160)
T 2a4d_A 103 MNGVNSSNGVVDPRAISVLA--KWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQC 157 (160)
T ss_dssp CTTBCTTTCBBCGGGSHHHH--TCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTCB
T ss_pred eCCEECCCCEEehhhcCCcc--CCCccCcHHHHHHHHHHHHccCCCCCCCCChhhcc
Confidence 99999 69999999997 6 8999999999999999999 579999999999983
No 45
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=3e-43 Score=240.81 Aligned_cols=117 Identities=26% Similarity=0.515 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCc-cc
Q 032159 6 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGF-FH 84 (146)
Q Consensus 6 ~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~H 84 (146)
.|.+||++|+++++++++.|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ ||
T Consensus 6 ~a~~RL~kEl~~l~~~~~~~~~~~~~~----~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~H 81 (125)
T 2fo3_A 6 NANYRIQKELHNFLNNPPINCTLDVHP----NNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKH 81 (125)
T ss_dssp ---CHHHHHHHHHHHSCCTTEEEEECT----TCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCB
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCc----chhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCC
Confidence 478999999999999999999998866 8999999999999999999999999999999999999999999996 99
Q ss_pred cccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCCC
Q 032159 85 PNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPAD 128 (146)
Q Consensus 85 pnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~~ 128 (146)
|||+.+|+||+++|.+ +|+|++++.+||.+|+++|.+|+...
T Consensus 82 Pnv~~~G~iCl~iL~~--~W~P~~~i~~vl~si~~ll~~p~~~~ 123 (125)
T 2fo3_A 82 THVYSNGDICLSLLGD--DYNPSLSISGLVLSIISMLSSAKEKK 123 (125)
T ss_dssp TTBCTTSBBCCGGGTT--TCCTTCCHHHHHHHHHHHHC------
T ss_pred CcCCCCCEEEchhcCC--CCCCCCcHHHHHHHHHHHHhCccccc
Confidence 9999999999999987 89999999999999999999998753
No 46
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.7e-42 Score=239.11 Aligned_cols=116 Identities=27% Similarity=0.544 Sum_probs=110.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCc-c
Q 032159 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGF-F 83 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~ 83 (146)
+.+.+||++|+++++++++.|+.+.+.. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |
T Consensus 19 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~----~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~ 94 (136)
T 2h2y_A 19 GNANYRIQKELNNFLKNPPINCTIDVHP----SNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPK 94 (136)
T ss_dssp TSHHHHHHHHHHHHHHSCCTTEEEEECT----TCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCeEEEecc----ccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCC
Confidence 4689999999999999999999998876 8999999999999999999999999999999999999999999996 9
Q ss_pred ccccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCC
Q 032159 84 HPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNP 126 (146)
Q Consensus 84 HpnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~ 126 (146)
||||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|+.
T Consensus 95 HPnv~~~G~ICl~iL~~--~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 95 HTHVYSNGDICLSVLGD--DYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp CTTBCTTCCBCCGGGTT--TCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCcCCCCCEEECccccC--CCCCCCcHHHHHHHHHHHHhCcCc
Confidence 99999999999999987 899999999999999999999875
No 47
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=9.9e-43 Score=249.13 Aligned_cols=128 Identities=23% Similarity=0.343 Sum_probs=116.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCC-eEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCcc
Q 032159 5 GIARGRLTEERKAWRKNHPHG-FVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFF 83 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~~~~~-~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 83 (146)
+.+.+||++||+++++++++| +++.+..++ ..|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 34 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~-d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 112 (170)
T 2hlw_A 34 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDE-DMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKIN 112 (170)
T ss_dssp CCHHHHHHHHHHHHHHCCGGGCEEEEESSTT-CSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEecCcc-cccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccc
Confidence 458999999999999998888 667663321 024999999999999999999999999999999999999999999999
Q ss_pred ccccC-CCCcEEecCCC--CCCCCCccCcHHHHHHHHHHhhc-CCCCCCCCCHHHH
Q 032159 84 HPNVY-PSGTVCLSILN--EDNGWRPAITVKQILVGIQDLLD-QPNPADPAQTDGY 135 (146)
Q Consensus 84 HpnV~-~~G~icl~~l~--~~~~W~p~~~l~~vl~~i~~ll~-~p~~~~p~n~~aa 135 (146)
||||+ .+|+||+++|. + +|+|+++|.+||.+|+++|. +||.++|+|.|||
T Consensus 113 HPNV~~~~G~ICl~iL~~~~--~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 113 MNGVNSSNGVVDPRAISVLA--KWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp CSSBCSSSCBBCTTTCHHHH--TCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred cCCEeCCCCEEEhhhcCCCC--CCCccCcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 99999 79999999997 5 89999999999999999996 5999999999987
No 48
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-41 Score=235.05 Aligned_cols=109 Identities=34% Similarity=0.660 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHHcCCCCeEEe--ecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCcc--
Q 032159 8 RGRLTEERKAWRKNHPHGFVAK--PETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFF-- 83 (146)
Q Consensus 8 ~~Rl~~El~~l~~~~~~~~~~~--~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~-- 83 (146)
.+||++|++++++++++|+++. +.+ +|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~~~----~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~ 99 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKSVQ----NSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPV 99 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTCCC----CSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeeCc----cccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCC
Confidence 4999999999999999999864 544 79999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhc
Q 032159 84 HPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLD 122 (146)
Q Consensus 84 HpnV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~ 122 (146)
||||+.+|+||+++|.+ +|+|+++|++||.+|+++|.
T Consensus 100 HPNV~~~G~ICL~iL~~--~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 100 HPHVYSNGHICLSILTE--DWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp BTTBCTTCBBCCGGGTT--TCCTTSCHHHHHHHHHHHTC
T ss_pred CccCCCCCeEEchhcCC--CCCCCCcHHHHHHHHHHHhC
Confidence 99999999999999987 89999999999999999974
No 49
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=9.3e-41 Score=258.37 Aligned_cols=138 Identities=30% Similarity=0.541 Sum_probs=124.6
Q ss_pred chHHHHHHHHHHHHHHHcCCCC----eEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeec
Q 032159 4 GGIARGRLTEERKAWRKNHPHG----FVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFP 79 (146)
Q Consensus 4 ~~~~~~Rl~~El~~l~~~~~~~----~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 79 (146)
++.+.+||++|+++|+++++++ +.+.+.. +|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.
T Consensus 74 s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~e----dnl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~ 149 (323)
T 3ceg_A 74 SAARARRLAQEAVTLSTSLPLSSSSSVFVRCDE----ERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLE 149 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEES----SCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEEC
T ss_pred CHHHHHHHHHHHHHHHhCCCCCcccceeecccC----CCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEe
Confidence 3789999999999999988775 4455555 7999999999999999999999999999999999999999999
Q ss_pred cC-----ccccccCCCCcEEecCCCC-----CCCCCccC-cHHHHHHHHHHhhc--CCCCCCCCCHHH--HHHHHHhHhh
Q 032159 80 QG-----FFHPNVYPSGTVCLSILNE-----DNGWRPAI-TVKQILVGIQDLLD--QPNPADPAQTDG--YQLFIQVLYW 144 (146)
Q Consensus 80 t~-----i~HpnV~~~G~icl~~l~~-----~~~W~p~~-~l~~vl~~i~~ll~--~p~~~~p~n~~a--a~~~~~~~~~ 144 (146)
|+ +|||||+.+|+||+++|.. .++|+|++ +|.+||.+|+++|. +|++++|+|.++ +.+|++|+++
T Consensus 150 T~~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~ 229 (323)
T 3ceg_A 150 TTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSRE 229 (323)
T ss_dssp CSTTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHH
T ss_pred ccCCCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHH
Confidence 98 9999999999999999972 13899999 89999999999995 788899999987 6789999887
Q ss_pred h
Q 032159 145 F 145 (146)
Q Consensus 145 f 145 (146)
|
T Consensus 230 Y 230 (323)
T 3ceg_A 230 Y 230 (323)
T ss_dssp H
T ss_pred H
Confidence 7
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.8e-38 Score=229.35 Aligned_cols=133 Identities=24% Similarity=0.413 Sum_probs=110.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCccc
Q 032159 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (146)
Q Consensus 5 ~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (146)
+.+.+||++||++|++++++++.+.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ |
T Consensus 13 ~~a~~RL~kEl~~l~~~~~~~i~~~p~~----~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~ 86 (187)
T 2f4w_A 13 TTATQRLKQDYLRIKKDPVPYICAEPLP----SNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--N 86 (187)
T ss_dssp -CHHHHHHHHHHHHHHSCCTTEEEEEET----TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--C
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcC----CccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--C
Confidence 4578999999999999999999999876 899999999999999999999999999999999999999999999 9
Q ss_pred cccCCCCcEEecCCCC-CCCCCccCcHHHHHHHHHHhhcCCCCCCC---CCHHHHHHHHHhHh
Q 032159 85 PNVYPSGTVCLSILNE-DNGWRPAITVKQILVGIQDLLDQPNPADP---AQTDGYQLFIQVLY 143 (146)
Q Consensus 85 pnV~~~G~icl~~l~~-~~~W~p~~~l~~vl~~i~~ll~~p~~~~p---~n~~aa~~~~~~~~ 143 (146)
|||+.+|+||+++|.. .++|+|+++|.+||.+|+++|.+|+++.. ...+..+.|..+..
T Consensus 87 ~~~~~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~g~~~~~~~~r~~~a~~s~ 149 (187)
T 2f4w_A 87 GRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSL 149 (187)
T ss_dssp SSBCTTSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCTTBCCCCHHHHHHHHHHHH
T ss_pred ceeccCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCCcccccChHHHHHHHHHHH
Confidence 9999999999999941 12899999999999999999999998643 23444555555544
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=1.6e-38 Score=230.34 Aligned_cols=119 Identities=18% Similarity=0.378 Sum_probs=110.7
Q ss_pred chHHHHHHHHHHHHHHHcC---CCCeEEeecCCCCCCCccEEEEEEcCC-CCCCCCC-----------CEEEEEEEeCCC
Q 032159 4 GGIARGRLTEERKAWRKNH---PHGFVAKPETKDGSVNLMIWECIIPGK-TGTDWEG-----------GYFPLTLYFSED 68 (146)
Q Consensus 4 ~~~~~~Rl~~El~~l~~~~---~~~~~~~~~~~~~~~~~~~w~~~i~gp-~~tpy~g-----------g~f~~~i~fp~~ 68 (146)
++.+.+||++||++|++++ +.++++.+.+ +|+++|+++|.|| ++|||+| |.|+++|.||++
T Consensus 25 s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~----dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~ 100 (186)
T 1zuo_A 25 SVQASDRLMKELRDIYRSQSYKTGIYSVELIN----DSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDN 100 (186)
T ss_dssp CHHHHHHHHHHHHHHHTSHHHHTTSEEEEEET----TEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTT
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcC----CccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCC
Confidence 3789999999999999987 6889998877 7999999999997 9999998 899999999999
Q ss_pred CCCCCCeeeeccCcccc-ccCCCCcEEecCCCCCCCCCccCcHHHHHHHHHHhhcCCCCC
Q 032159 69 YPSKPPKCKFPQGFFHP-NVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPA 127 (146)
Q Consensus 69 YP~~pP~v~f~t~i~Hp-nV~~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll~~p~~~ 127 (146)
||++||+|+|.|++||| ||+.+|+||+++|..+ +|+|+++|.+||.+|+++|.+|+..
T Consensus 101 YP~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~-~WsP~~ti~~VL~sI~slL~~p~a~ 159 (186)
T 1zuo_A 101 FPFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQ-GWSSAYSIESVIMQINATLVKGKAR 159 (186)
T ss_dssp TTSSCCEEEEEESCEESTTBCGGGBBCCGGGSTT-TCCTTSCHHHHHHHHHHHHHHTTCE
T ss_pred CCCCCCeEEEeCCccCCCccCCCCcEEeccCCCC-CCCCcCcHHHHHHHHHHHHcCCChh
Confidence 99999999999999999 6999999999999732 8999999999999999999988764
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.95 E-value=1.1e-29 Score=178.02 Aligned_cols=115 Identities=18% Similarity=0.255 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCC----------EEEEEEEeCCCCCCCCCeee
Q 032159 8 RGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGG----------YFPLTLYFSEDYPSKPPKCK 77 (146)
Q Consensus 8 ~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg----------~f~~~i~fp~~YP~~pP~v~ 77 (146)
.+||++|++.|++. +.+.. +|++.|.+.+.||+||+|+|| .|++++.||++||.+||+|+
T Consensus 34 ~~RL~eE~k~L~k~------v~p~k----~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~ 103 (172)
T 2z6o_A 34 VQRLKEEYQSLIRY------VENNK----NADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIA 103 (172)
T ss_dssp HHHHHHHHHHHHHH------HHHHH----HTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCB
T ss_pred HHHHHHHHHHHHHH------hccCc----cccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeee
Confidence 99999999999883 45555 799999999999999999999 99999999999999999999
Q ss_pred eccC-ccccccCCCCcEEecCCCCC--CCCCccCcHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHH
Q 032159 78 FPQG-FFHPNVYPSGTVCLSILNED--NGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYQLFIQ 140 (146)
Q Consensus 78 f~t~-i~HpnV~~~G~icl~~l~~~--~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~ 140 (146)
|.++ +||||||.+|+||+++|... ..|+|.++|..+|.- ....++..|+..+...
T Consensus 104 F~~~~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~l--------gl~pwla~eip~lv~~ 161 (172)
T 2z6o_A 104 VPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMAL--------GLGPWLAVEIPDLIQK 161 (172)
T ss_dssp CGGGTTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHHH--------THHHHHHHHHHHHHHH
T ss_pred eCCCCCCCCCCCCCCcEechhhccccccccCCccCHHHHHhh--------ccCchhhhhhHHHHHc
Confidence 9998 99999999999999999441 035599999999842 2233455666665554
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.84 E-value=6.3e-21 Score=134.60 Aligned_cols=114 Identities=19% Similarity=0.274 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHcCC---CCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCE---EEEEEEeCCCCCCCCCeeeecc-
Q 032159 8 RGRLTEERKAWRKNHP---HGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGY---FPLTLYFSEDYPSKPPKCKFPQ- 80 (146)
Q Consensus 8 ~~Rl~~El~~l~~~~~---~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~---f~~~i~fp~~YP~~pP~v~f~t- 80 (146)
.+|..+|+..+.+.-+ +...+...+ +...++.+.+.|.-.++|+|+. |.+.|.||.+||++||.|.|.+
T Consensus 30 ~~~~~~dv~~~l~~yp~L~p~t~~yt~~----dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~ 105 (162)
T 3r3q_A 30 GRTTFHDSLALLDNFHSLRPRTRVFTHS----DGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLE 105 (162)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEECT----TSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGG
T ss_pred hhHHHHHHHHHHHhCCCCceeeeeEEcC----CCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECC
Confidence 3677788888766432 122223333 4555666666776668999998 8899999999999999998865
Q ss_pred ------C---cc-ccccCCCCcEEecCCCCCCCCCc-cCcHHHHHHHHHHhhcCCCCCC
Q 032159 81 ------G---FF-HPNVYPSGTVCLSILNEDNGWRP-AITVKQILVGIQDLLDQPNPAD 128 (146)
Q Consensus 81 ------~---i~-HpnV~~~G~icl~~l~~~~~W~p-~~~l~~vl~~i~~ll~~p~~~~ 128 (146)
+ ++ |||||.+|+||+.+|. +|++ +.++.++|.+|+++|.+|+++.
T Consensus 106 t~~m~~~~~~I~~hpnVD~~G~I~lpyL~---~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 106 NFDMNTISSSLPIQEYIDSNGWIALPILH---AWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp GCCTTTSCTTSTHHHHBCTTSBBCCGGGG---SCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred CccccccccccCCCCCCCCCCcEeCcccc---cCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 1 77 9999999999999995 5999 5799999999999999999875
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.74 E-value=5.6e-19 Score=121.38 Aligned_cols=87 Identities=22% Similarity=0.410 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCC----------EEEEEEEeCCCCCCCCCe
Q 032159 6 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGG----------YFPLTLYFSEDYPSKPPK 75 (146)
Q Consensus 6 ~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg----------~f~~~i~fp~~YP~~pP~ 75 (146)
.-..||+.||..|.+- +..-. .+-..|...+.|++||+|.|+ .|+++++||.+||.+||+
T Consensus 34 ~w~~RlkeEy~alI~y------v~~nK----~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPe 103 (168)
T 3kpa_A 34 KWTARLKEEYASLITY------VEHNK----ASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPE 103 (168)
T ss_dssp HHHHHHHHHHHHHHHH------HHHHH----HTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCC
T ss_pred HHHHHHHHHHHHHHHH------HHhcc----cccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCE
Confidence 3578999999999652 22212 355568888999999999999 999999999999999999
Q ss_pred eeeccC-ccccccCCCCcEEecCCCCCCCCCcc
Q 032159 76 CKFPQG-FFHPNVYPSGTVCLSILNEDNGWRPA 107 (146)
Q Consensus 76 v~f~t~-i~HpnV~~~G~icl~~l~~~~~W~p~ 107 (146)
|+|.+. .+|||+|.+|+||++++ |+|.
T Consensus 104 I~Fp~ldgkt~kmYr~GkICLdIh-----wkPl 131 (168)
T 3kpa_A 104 IALPELEGKTVKMYRGGKICMTTH-----FFPL 131 (168)
T ss_dssp CBCGGGTTTCSSEETTTEECCCTT-----HHHH
T ss_pred eecccccCcCccccCCCcEEeccc-----cchh
Confidence 999995 89999999999999974 6665
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.63 E-value=1.9e-15 Score=104.84 Aligned_cols=104 Identities=21% Similarity=0.351 Sum_probs=80.4
Q ss_pred HHHHHHHHHHcCCC-CeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEE--EEEEeCCCCCCCCCeeeeccC------
Q 032159 11 LTEERKAWRKNHPH-GFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFP--LTLYFSEDYPSKPPKCKFPQG------ 81 (146)
Q Consensus 11 l~~El~~l~~~~~~-~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~--~~i~fp~~YP~~pP~v~f~t~------ 81 (146)
..+|...+.+.-+. ........ ....++..|.++|. .+|+|+.|. +.|.||++||++||.| |.++
T Consensus 25 t~~dv~~vl~~yp~L~p~~~~y~-G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I 98 (146)
T 3obq_A 25 TVRETVNVITLYKDLKPVLDSYG-TGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTI 98 (146)
T ss_dssp HHHHHHHHHHHCTTEEEEEEESS-STTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEE
T ss_pred hHHHHHHHHHhCCCCceEeeeee-CChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEE
Confidence 34566666554321 11111111 33479999999998 689999998 4999999999999999 6665
Q ss_pred ccccccCCCCcEEecCCCCCCCCCc-cCcHHHHHHHHHHhhcC
Q 032159 82 FFHPNVYPSGTVCLSILNEDNGWRP-AITVKQILVGIQDLLDQ 123 (146)
Q Consensus 82 i~HpnV~~~G~icl~~l~~~~~W~p-~~~l~~vl~~i~~ll~~ 123 (146)
..|||||.+|+||+..|.+ |++ ..+|.+++..|+++|.+
T Consensus 99 ~~~~~Vd~~G~i~lpyL~~---W~~~~snL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 99 KTGKHVDANGKIYLPYLHE---WKHPQSDLLGLIQVMIVVFGD 138 (146)
T ss_dssp CCBTTBCTTCBBCCHHHHT---CCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCEecccccc---cCCCCCCHHHHHHHHHHHHhh
Confidence 5899999999999999954 988 67999999999999943
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.74 E-value=0.011 Score=39.13 Aligned_cols=68 Identities=19% Similarity=0.239 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeecc
Q 032159 7 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (146)
Q Consensus 7 ~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (146)
...+...|+..|..--+..+.+. . .....+.+.+....+..-+.-.+.+.|.+|++||..||.+...+
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~~--~----~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTVL--S----ENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEC--C----SSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred hHHHHHHHHHHHHHHccCceEEc--c----CCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 35667889988876555555432 2 23456666666322222234478899999999999999997754
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.08 E-value=0.057 Score=35.63 Aligned_cols=70 Identities=16% Similarity=0.119 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCC--CCCEEEEEEEeCCCCCCCCCeeeecc
Q 032159 9 GRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDW--EGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (146)
Q Consensus 9 ~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy--~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (146)
.+...|+..|..--+..+.+.... .......+.+.+..+.+..- ..-.+.+.|.+|++||..+|.+...+
T Consensus 11 e~~~~EleaL~SIY~de~~~~~~~--~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 11 WVLPSEVEVLESIYLDELQVIKGN--GRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CHHHHHHHHHHHHSTTTEEEECCT--TSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCceEEecCC--CCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEc
Confidence 457788988876555555543211 00134455666653222111 12478899999999999999998765
No 58
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=95.91 E-value=0.049 Score=38.78 Aligned_cols=83 Identities=16% Similarity=0.219 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHcCCCCeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccCccccccC
Q 032159 9 GRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVY 88 (146)
Q Consensus 9 ~Rl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~ 88 (146)
++|.+|+.+|-=+. .+. .+ .++....+++.... |..+.++|.++.+||.++|.+...-|. |.
T Consensus 4 ~~li~Ei~~iGW~~----l~~-id----~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~--~~-- 65 (186)
T 3zqs_A 4 SSLIEEIGTLGWDK----LVY-AD----TCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV--PF-- 65 (186)
T ss_dssp CSHHHHHHHHCGGG----EEE-EC----TTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS--CC--
T ss_pred HHHHHHHHHhCCce----eee-ec----CCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC--Cc--
Confidence 36788888872221 111 12 57888888887433 679999999999999999988765443 11
Q ss_pred CCCcEEecCCCCCCCCCccCcHHHHHHHHHHhh
Q 032159 89 PSGTVCLSILNEDNGWRPAITVKQILVGIQDLL 121 (146)
Q Consensus 89 ~~G~icl~~l~~~~~W~p~~~l~~vl~~i~~ll 121 (146)
.. .|.+..++.+++...+..+
T Consensus 66 ----------~~--~w~~~ssL~~v~~qF~~~L 86 (186)
T 3zqs_A 66 ----------CA--SWTPQSSLISIYSQFLAAI 86 (186)
T ss_dssp ----------CC--CCCTTCCHHHHHHHHHHHH
T ss_pred ----------cc--ccCCCccHHHHHHHHHHHH
Confidence 01 6999999999988776665
No 59
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=95.64 E-value=0.089 Score=35.15 Aligned_cols=71 Identities=17% Similarity=0.198 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHcCCCCeEEeecCCCC--CCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeecc
Q 032159 9 GRLTEERKAWRKNHPHGFVAKPETKDG--SVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (146)
Q Consensus 9 ~Rl~~El~~l~~~~~~~~~~~~~~~~~--~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (146)
.+-..|+..|..--+..+...-....+ ......+.+.+.+..+ .-..-.+.+.|.+|++||..||.|.+.+
T Consensus 13 e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 13 EIQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp HHHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred HHHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 345677777765444443321100000 0124566777774322 1123478899999999999999998764
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.41 E-value=0.045 Score=36.22 Aligned_cols=67 Identities=10% Similarity=0.043 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHcCCC--CeEEeecCCCCCCCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeec
Q 032159 9 GRLTEERKAWRKNHPH--GFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFP 79 (146)
Q Consensus 9 ~Rl~~El~~l~~~~~~--~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 79 (146)
.+...|+..|..--+. .+.+.-.. ..+...+.+.+.... ..=..-.+.+.|.+|++||..+|.+...
T Consensus 10 e~q~~EleaL~SIy~d~~e~~~~~~~---~~~~~~f~i~l~~~~-~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 10 EPVQEELSVLAAIFCRPHEWEVLSRS---ETDGTVFRIHTKAEG-FMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp HHHHHHHHHHHHHHCCTTTCCCSEEC---SSSCEEEEEEEECCT-TTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHHcCCCCceEEecCC---CCCCCeEEEEecCCC-CCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 4566788777653221 23221111 023457777776322 1111247899999999999999999765
No 61
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=94.75 E-value=0.2 Score=34.23 Aligned_cols=24 Identities=13% Similarity=0.080 Sum_probs=21.4
Q ss_pred EEEEEEEeCCCCCCCCCeeeeccC
Q 032159 58 YFPLTLYFSEDYPSKPPKCKFPQG 81 (146)
Q Consensus 58 ~f~~~i~fp~~YP~~pP~v~f~t~ 81 (146)
.+.+.|.+|.+||..+|.|...+.
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 799999999999999999986653
No 62
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=93.82 E-value=0.5 Score=31.25 Aligned_cols=71 Identities=13% Similarity=0.042 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHcCCCCeEEeecCCC-CCCCccEEEEEEcCCCC-C-CCCCCEEEEEEEeCCCCCCCCCeeeec
Q 032159 8 RGRLTEERKAWRKNHPHGFVAKPETKD-GSVNLMIWECIIPGKTG-T-DWEGGYFPLTLYFSEDYPSKPPKCKFP 79 (146)
Q Consensus 8 ~~Rl~~El~~l~~~~~~~~~~~~~~~~-~~~~~~~w~~~i~gp~~-t-py~gg~f~~~i~fp~~YP~~pP~v~f~ 79 (146)
..+...|+..|..--+..+........ .........+.+.. .+ . .-..-.+.+.|.||++||..+|.|...
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~~-~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 12 SQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLYP-QGLAGEEVYVQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp HHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEECC-TTSCSSSCSCEEEEEECCCTTTTSSCCCCEEE
T ss_pred HHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEec-CCcCCcccceEEEEEEECCCCCCCCCCcEEEe
Confidence 455678888887654455543211100 00013455666662 22 1 001246889999999999999999874
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=93.26 E-value=0.38 Score=32.65 Aligned_cols=25 Identities=20% Similarity=0.341 Sum_probs=21.4
Q ss_pred CEEEEEEEeCCCCCCCCCeeeeccC
Q 032159 57 GYFPLTLYFSEDYPSKPPKCKFPQG 81 (146)
Q Consensus 57 g~f~~~i~fp~~YP~~pP~v~f~t~ 81 (146)
-.+.+.|.+|.+||..||.+.....
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEECT
T ss_pred ceEEEEEECCCCCCCCCCeEEEEcc
Confidence 3688999999999999999987653
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=56.14 E-value=9.7 Score=17.33 Aligned_cols=21 Identities=33% Similarity=0.347 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCe
Q 032159 6 IARGRLTEERKAWRKNHPHGF 26 (146)
Q Consensus 6 ~~~~Rl~~El~~l~~~~~~~~ 26 (146)
....||.-|+..++.+++.|.
T Consensus 5 seldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 5 SELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHHhhhccCCCCCC
Confidence 357899999999988888764
No 65
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=42.79 E-value=68 Score=22.25 Aligned_cols=43 Identities=14% Similarity=0.283 Sum_probs=31.7
Q ss_pred CCccEEEEEEcCCCCCCCCCCEEEEEEEeCCCCCCCCCeeeeccC
Q 032159 37 VNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQG 81 (146)
Q Consensus 37 ~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 81 (146)
+...+|.|-+.|+.+.--..-+=++.+.|.+.||. |...+..+
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~P 72 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAP 72 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSS
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCC
Confidence 67889999999987654444577788899999974 55555444
No 66
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=37.73 E-value=88 Score=20.85 Aligned_cols=44 Identities=11% Similarity=0.281 Sum_probs=32.5
Q ss_pred CccEEE--EEEcCCCCCCCC-CCEEEEEEEeCCCCCCCCCeeeeccCcc
Q 032159 38 NLMIWE--CIIPGKTGTDWE-GGYFPLTLYFSEDYPSKPPKCKFPQGFF 83 (146)
Q Consensus 38 ~~~~w~--~~i~gp~~tpy~-gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 83 (146)
-+..|. +.+.|++|.... .-+=++.+.+.+.|+ .|...+..+.|
T Consensus 31 ~~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~--np~r~v~~pPF 77 (140)
T 3qrl_A 31 PVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFA--NPNRTFTDPPF 77 (140)
T ss_dssp CCEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSS--SCEEEECSTTC
T ss_pred cccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCC--CCeEEEcCCCc
Confidence 446998 899998887654 456678888888887 47777766544
No 67
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=32.78 E-value=19 Score=20.57 Aligned_cols=17 Identities=24% Similarity=0.085 Sum_probs=15.1
Q ss_pred CCHHHHHHHHHhHhhhC
Q 032159 130 AQTDGYQLFIQVLYWFI 146 (146)
Q Consensus 130 ~n~~aa~~~~~~~~~f~ 146 (146)
-|++.+++..+|+++|+
T Consensus 37 ~nP~l~~~I~~n~e~Fl 53 (61)
T 2f4m_B 37 ENPQLLQQISQHQEHFI 53 (61)
T ss_dssp HCHHHHHHHHHSHHHHH
T ss_pred HCHHHHHHHHHCHHHHH
Confidence 57999999999999985
No 68
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=31.32 E-value=26 Score=15.90 Aligned_cols=17 Identities=29% Similarity=0.608 Sum_probs=9.5
Q ss_pred CCCCCeeeeccCccccc
Q 032159 70 PSKPPKCKFPQGFFHPN 86 (146)
Q Consensus 70 P~~pP~v~f~t~i~Hpn 86 (146)
|..-|.-.|..+.|||-
T Consensus 4 pmtlpenyfserpyhpp 20 (26)
T 2jrw_A 4 PMTLPENYFSERPYHPP 20 (26)
T ss_dssp CCCCSSSSCCSSSCCSC
T ss_pred ccccchhhcccCCCCCC
Confidence 33444445666677763
No 69
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=29.31 E-value=21 Score=21.15 Aligned_cols=18 Identities=22% Similarity=0.064 Sum_probs=15.9
Q ss_pred CCCHHHHHHHHHhHhhhC
Q 032159 129 PAQTDGYQLFIQVLYWFI 146 (146)
Q Consensus 129 p~n~~aa~~~~~~~~~f~ 146 (146)
--|++++++..+|+++|+
T Consensus 38 ~~NPqL~q~I~~n~e~Fl 55 (72)
T 1pve_A 38 RENPQLLQQISQHQEHFI 55 (72)
T ss_dssp TTCHHHHHHHHTTHHHHH
T ss_pred hHCHHHHHHHHHCHHHHH
Confidence 468999999999999985
No 70
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=28.62 E-value=26 Score=21.45 Aligned_cols=12 Identities=17% Similarity=0.194 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHH
Q 032159 7 ARGRLTEERKAW 18 (146)
Q Consensus 7 ~~~Rl~~El~~l 18 (146)
..||||+||+-|
T Consensus 63 QLKRvQRdlrGL 74 (87)
T 2rf4_B 63 QLKRIQRDFKGL 74 (87)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHhhcCC
Confidence 578999998754
No 71
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=25.90 E-value=46 Score=15.03 Aligned_cols=13 Identities=15% Similarity=0.258 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHH
Q 032159 7 ARGRLTEERKAWR 19 (146)
Q Consensus 7 ~~~Rl~~El~~l~ 19 (146)
-.+.|++|+++-+
T Consensus 9 lqkkirkelkqrq 21 (26)
T 1m46_B 9 LQKKIRKELKQRQ 21 (26)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3577888887543
No 72
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=25.66 E-value=15 Score=23.58 Aligned_cols=26 Identities=4% Similarity=-0.089 Sum_probs=0.0
Q ss_pred hcCCCCCCCCCHHHHHHHHHhHhhhC
Q 032159 121 LDQPNPADPAQTDGYQLFIQVLYWFI 146 (146)
Q Consensus 121 l~~p~~~~p~n~~aa~~~~~~~~~f~ 146 (146)
|.-.....|.+.+.|++|+++++.|.
T Consensus 18 ~~~~~~~~PQDA~VA~qy~~~~~~f~ 43 (108)
T 2cwb_A 18 LKGETTTEAVDAATAEKVFKQYANDN 43 (108)
T ss_dssp --------------------------
T ss_pred ccCcccCCchhHHHHHHHHhchhccc
Confidence 34455678999999999999998873
No 73
>3pft_A Flavin reductase; desulfurization, oxidoreductase; HET: FMN; 1.60A {Mycobacterium goodii} SCOP: b.45.1.0
Probab=25.40 E-value=29 Score=23.18 Aligned_cols=30 Identities=23% Similarity=0.397 Sum_probs=24.5
Q ss_pred CCCCeeeec---cCccccccCCCCcEEecCCCC
Q 032159 71 SKPPKCKFP---QGFFHPNVYPSGTVCLSILNE 100 (146)
Q Consensus 71 ~~pP~v~f~---t~i~HpnV~~~G~icl~~l~~ 100 (146)
..||.|.+. +.--|++|-++|.+|+++|..
T Consensus 42 ~~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~ 74 (157)
T 3pft_A 42 LEPPLVAFAVQNSSTTWPKLKDLPSLGISVLGE 74 (157)
T ss_dssp TTTTEEEEEEETTCSSHHHHTTSSCEEEEECBT
T ss_pred CCCcEEEEEECCCCchHHHHHhCCEEEEEECCH
Confidence 367888775 346799999999999999987
No 74
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=24.61 E-value=58 Score=16.75 Aligned_cols=14 Identities=21% Similarity=0.176 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHH
Q 032159 6 IARGRLTEERKAWR 19 (146)
Q Consensus 6 ~~~~Rl~~El~~l~ 19 (146)
...+||.+|++.+.
T Consensus 28 ~~~~~~~~~~~~~~ 41 (42)
T 3g9r_A 28 SKIKRIENEIKRIK 41 (42)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 36899999999875
Done!