Query 032160
Match_columns 146
No_of_seqs 107 out of 224
Neff 5.3
Searched_HMMs 13730
Date Mon Mar 25 16:48:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032160.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032160hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2axti1 f.23.37.1 (I:1-35) Pho 28.6 41 0.003 17.9 4.1 29 112-142 4-33 (35)
2 d1mzba_ a.4.5.42 (A:) Ferric u 24.6 13 0.00091 24.4 1.2 34 78-111 32-66 (134)
3 d2axtt1 f.23.34.1 (T:1-30) Pho 22.2 50 0.0037 16.7 3.4 22 4-25 2-23 (30)
4 d1xmea1 f.24.1.1 (A:14-562) Ba 10.9 3.2E+02 0.023 21.8 7.1 51 89-139 436-486 (549)
5 d1otsa_ f.20.1.1 (A:) Clc chlo 10.4 1.2E+02 0.0089 23.2 4.1 43 66-109 399-443 (444)
6 d1mmsa2 d.47.1.1 (A:8-70) Ribo 8.9 38 0.0028 20.2 0.3 13 36-48 25-37 (63)
7 d1of9a_ a.64.1.4 (A:) Ameobapo 8.8 60 0.0044 18.8 1.2 25 22-47 51-75 (77)
8 d1ppjd2 f.23.11.1 (D:196-241) 8.4 1.7E+02 0.013 15.9 4.9 30 107-136 6-38 (46)
9 d2fuea1 c.108.1.10 (A:13-256) 7.6 33 0.0024 22.4 -0.6 17 36-52 228-244 (244)
10 d1nkla_ a.64.1.1 (A:) NK-lysin 7.5 1.4E+02 0.01 16.9 2.6 25 22-47 50-74 (78)
No 1
>d2axti1 f.23.37.1 (I:1-35) Photosystem II reaction center protein I, PsbI {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=28.59 E-value=41 Score=17.92 Aligned_cols=29 Identities=14% Similarity=0.305 Sum_probs=16.9
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHhccCCCCCC
Q 032160 112 AKLGFY-VIFFALVIAKLAMAGFEALAGKDEN 142 (146)
Q Consensus 112 iKl~fy-ll~Ff~~ly~mi~~lv~~~~~~~~~ 142 (146)
.|+..| .+.||..++ |.-.++++|+...+
T Consensus 4 LKi~Vy~vV~fFv~lF--iFGFLSnDP~RnP~ 33 (35)
T d2axti1 4 LKITVYIVVTFFVLLF--VFGFLSGDPARNPK 33 (35)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHHTTCTTCSSC
T ss_pred EEEehhhHHHHHHHHH--HHhhccCCCCCCCC
Confidence 355555 456666665 55667777654443
No 2
>d1mzba_ a.4.5.42 (A:) Ferric uptake regulation protein, FUR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=24.63 E-value=13 Score=24.45 Aligned_cols=34 Identities=15% Similarity=0.093 Sum_probs=26.3
Q ss_pred HHHHHHHHHHhhccC-ccchhhhhhhhHHHHHHHH
Q 032160 78 PLVCYHVNLYMKRKH-LIDVTEVFRNLKVEKKFRL 111 (146)
Q Consensus 78 Pll~y~~~~y~~r~~-l~D~TeIf~~L~~~kk~~~ 111 (146)
|+.+..++...+.++ -++.++|||+|+.-...+.
T Consensus 32 h~sa~ei~~~l~~~~~~i~~aTVYR~L~~l~e~gl 66 (134)
T d1mzba_ 32 HMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGL 66 (134)
T ss_dssp SBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHHhCCCccHHHHHHHHHHHHhccE
Confidence 677788888887664 5899999998887776654
No 3
>d2axtt1 f.23.34.1 (T:1-30) Photosystem II reaction center protein T, PsbT {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=22.16 E-value=50 Score=16.73 Aligned_cols=22 Identities=18% Similarity=0.161 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 032160 4 IFLFWFLMSAINIALIASTFYQ 25 (146)
Q Consensus 4 ~~~~~i~a~ll~~~ll~~~vy~ 25 (146)
+.+.|++.|.-..++.|..+++
T Consensus 2 e~i~yv~ifac~i~lfffaiff 23 (30)
T d2axtt1 2 ETITYVFIFACIIALFFFAIFF 23 (30)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceeehHHHHHHHHHHHHHHHHh
Confidence 4556666555455666665553
No 4
>d1xmea1 f.24.1.1 (A:14-562) Bacterial ba3 type cytochrome c oxidase subunit I {Thermus thermophilus [TaxId: 274]}
Probab=10.91 E-value=3.2e+02 Score=21.81 Aligned_cols=51 Identities=14% Similarity=0.113 Sum_probs=36.0
Q ss_pred hccCccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 032160 89 KRKHLIDVTEVFRNLKVEKKFRLAKLGFYVIFFALVIAKLAMAGFEALAGK 139 (146)
Q Consensus 89 ~r~~l~D~TeIf~~L~~~kk~~~iKl~fyll~Ff~~ly~mi~~lv~~~~~~ 139 (146)
||...+|..|.+.+......-+.+--....+.....+|.++.++.+.+..|
T Consensus 436 RR~~~~~~~~~~~~~~~~~~~~~igg~i~~~g~l~f~~nl~~s~~~~~~~~ 486 (549)
T d1xmea1 436 RRAYIAQVPDAYPHAAVPMVFNVLAGIVLLVALLLFIYGLFSVLLSRERKP 486 (549)
T ss_dssp SSCCGGGSGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCH
T ss_pred cccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 344566666766665555566667777788888888999999998665543
No 5
>d1otsa_ f.20.1.1 (A:) Clc chloride channel {Escherichia coli [TaxId: 562]}
Probab=10.35 E-value=1.2e+02 Score=23.20 Aligned_cols=43 Identities=16% Similarity=0.125 Sum_probs=29.8
Q ss_pred hhhH--HHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhHHHHHH
Q 032160 66 VTGH--WIMFLLGVPLVCYHVNLYMKRKHLIDVTEVFRNLKVEKKF 109 (146)
Q Consensus 66 l~g~--W~~~llnlPll~y~~~~y~~r~~l~D~TeIf~~L~~~kk~ 109 (146)
+||+ -+.-++-.-..+|-+.+..+++.+|| +-+-++++++++|
T Consensus 399 ltg~~~~~~p~~ia~~~a~~v~~~~~~~siY~-~~l~~~~~~~~~~ 443 (444)
T d1otsa_ 399 MTDNYQLILPMIITGLGATLLAQFTGGKPLYS-AILARTLAKQEAE 443 (444)
T ss_dssp HHCCGGGHHHHHHHHHHHHHHHHTTTCCCHHH-HHHHHHHHHHHHC
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHhCCCChHH-HHHHHHHHhhhcc
Confidence 4563 33334445567888899888888998 6667788877765
No 6
>d1mmsa2 d.47.1.1 (A:8-70) Ribosomal protein L11, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=8.95 E-value=38 Score=20.24 Aligned_cols=13 Identities=31% Similarity=0.378 Sum_probs=10.9
Q ss_pred cCChHHhhhhcCc
Q 032160 36 DINPFEASSRINF 48 (146)
Q Consensus 36 ~iNP~d~c~~lN~ 48 (146)
=+|..|+|+..|.
T Consensus 25 GiNi~~F~k~fN~ 37 (63)
T d1mmsa2 25 GVNIMEFCKRFNA 37 (63)
T ss_dssp TCCHHHHHHHHHH
T ss_pred CcCHHHHHHHHHH
Confidence 4789999999984
No 7
>d1of9a_ a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica [TaxId: 5759]}
Probab=8.80 E-value=60 Score=18.84 Aligned_cols=25 Identities=12% Similarity=0.121 Sum_probs=16.8
Q ss_pred HHHHHHhhhhcccccCChHHhhhhcC
Q 032160 22 TFYQLLCLLDLESDDINPFEASSRIN 47 (146)
Q Consensus 22 ~vy~li~l~DLe~D~iNP~d~c~~lN 47 (146)
.-|.=..++.++.+ .||.+.|+.++
T Consensus 51 ~~y~~~ii~~l~~~-~~p~~iC~~l~ 75 (77)
T d1of9a_ 51 DFGIDKLIQLIEDK-VDANAICAKIH 75 (77)
T ss_dssp HHCHHHHHHHHHHT-CCHHHHHHHHS
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHhcC
Confidence 34444555666664 59999998875
No 8
>d1ppjd2 f.23.11.1 (D:196-241) Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor {Cow (Bos taurus) [TaxId: 9913]}
Probab=8.41 E-value=1.7e+02 Score=15.93 Aligned_cols=30 Identities=7% Similarity=0.005 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHhcc
Q 032160 107 KKFRLAKLGFYVIFFA---LVIAKLAMAGFEAL 136 (146)
Q Consensus 107 kk~~~iKl~fyll~Ff---~~ly~mi~~lv~~~ 136 (146)
+|.--+|....+.++. +|..|-+||-+.+.
T Consensus 6 RK~mG~Kv~~~l~~l~~l~yy~KR~~Ws~lKsr 38 (46)
T d1ppjd2 6 RKRMGLKMLLMMGLLLPLVYAMKRHKWSVLKSR 38 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence 3444445554444443 34448899988654
No 9
>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.59 E-value=33 Score=22.44 Aligned_cols=17 Identities=18% Similarity=0.210 Sum_probs=14.4
Q ss_pred cCChHHhhhhcCcchhH
Q 032160 36 DINPFEASSRINFWVEP 52 (146)
Q Consensus 36 ~iNP~d~c~~lN~lv~p 52 (146)
-.||.|..++++.+++|
T Consensus 228 v~na~~~~k~~~~~~~~ 244 (244)
T d2fuea1 228 VVSPQDTVQRCREIFFP 244 (244)
T ss_dssp CSSHHHHHHHHHHHHCT
T ss_pred cCCHHHHHHHHHHhcCC
Confidence 45999999999988887
No 10
>d1nkla_ a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]}
Probab=7.46 E-value=1.4e+02 Score=16.85 Aligned_cols=25 Identities=12% Similarity=0.069 Sum_probs=16.9
Q ss_pred HHHHHHhhhhcccccCChHHhhhhcC
Q 032160 22 TFYQLLCLLDLESDDINPFEASSRIN 47 (146)
Q Consensus 22 ~vy~li~l~DLe~D~iNP~d~c~~lN 47 (146)
.-|.=..++.++. ..||-+.|+.++
T Consensus 50 ~~y~~~ii~~l~~-~~~p~~iC~~l~ 74 (78)
T d1nkla_ 50 RSFLRRISWDILT-GKKPQAICVDIK 74 (78)
T ss_dssp HHHHHHHHHHHHT-TCCHHHHHHHTT
T ss_pred HHHHHHHHHHHHh-CCCHHHHHhhhC
Confidence 3444455566655 569999999875
Done!