BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032165
(146 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3DH1|A Chain A, Crystal Structure Of Human Trna-Specific Adenosine-34
Deaminase Subunit Adat2
pdb|3DH1|B Chain B, Crystal Structure Of Human Trna-Specific Adenosine-34
Deaminase Subunit Adat2
pdb|3DH1|C Chain C, Crystal Structure Of Human Trna-Specific Adenosine-34
Deaminase Subunit Adat2
pdb|3DH1|D Chain D, Crystal Structure Of Human Trna-Specific Adenosine-34
Deaminase Subunit Adat2
Length = 189
Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Query: 11 DTLAFMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVL 70
+T +M+ A+ AK AL++ EVPVGC+++ + +V+ M AID +
Sbjct: 25 ETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQV 84
Query: 71 LDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSI 130
LD +++G S SE+ F LYVT EPCIMCAAAL ++ I V YGC NE+FGGCGS+
Sbjct: 85 LDWCRQSGKSPSEV---FEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSV 141
Query: 131 LSLHLSD 137
L++ +D
Sbjct: 142 LNIASAD 148
>pdb|2NX8|A Chain A, The Crystal Structure Of The Trna-Specific Adenosine
Deaminase From Streptococcus Pyogenes
Length = 179
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 15 FMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQW 74
FM A+++++ +L E+P+GCVI++DG++I M AI
Sbjct: 19 FMQEALKESEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAI------- 71
Query: 75 QKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSLH 134
N + E + L+VT EPC+MC+ A+ + I V YG +N+KFGG S+ +
Sbjct: 72 --NEANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGVDSLYQI- 128
Query: 135 LSDSKMLNR 143
L+D ++ +R
Sbjct: 129 LTDERLNHR 137
>pdb|2B3J|A Chain A, Crystal Structure Of Staphylococcus Aureus Trna Adenosine
Deaminase, Tada, In Complex With Rna
pdb|2B3J|B Chain B, Crystal Structure Of Staphylococcus Aureus Trna Adenosine
Deaminase, Tada, In Complex With Rna
pdb|2B3J|C Chain C, Crystal Structure Of Staphylococcus Aureus Trna Adenosine
Deaminase, Tada, In Complex With Rna
pdb|2B3J|D Chain D, Crystal Structure Of Staphylococcus Aureus Trna Adenosine
Deaminase, Tada, In Complex With Rna
Length = 159
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 16/136 (11%)
Query: 11 DTLAFMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDV- 69
+ + FM LAI++AK A EVP+G +I +D +VI AI+
Sbjct: 6 NDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERA 65
Query: 70 --LLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGC 127
+L W+ G C LYVT EPC+MCA + + I V YG + K G
Sbjct: 66 AKVLGSWRLEG------------CTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCS 113
Query: 128 GSILSLHLSDSKMLNR 143
GS+++L L S +R
Sbjct: 114 GSLMNL-LQQSNFNHR 128
>pdb|2A8N|A Chain A, Biochemical And Structural Studies Of A-To-I Editing By
Trna:a34 Deaminases At The Wobble Position Of Transfer
Rna
pdb|2A8N|B Chain B, Biochemical And Structural Studies Of A-To-I Editing By
Trna:a34 Deaminases At The Wobble Position Of Transfer
Rna
Length = 144
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 15 FMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQW 74
FM+LA+ +A+ A + EVP+G V++ DG+VI + I + +
Sbjct: 7 FMELALVEARSAGERDEVPIGAVLVLDGRVIARSGNRTRELNDVTAHAEIAVIRMACE-- 64
Query: 75 QKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGS 129
L Q E+ LYVT EPC MCAAA+S I+ +YYG + K G S
Sbjct: 65 ---ALGQ----ERLPGADLYVTLEPCTMCAAAISFARIRRLYYGAQDPKGGAVES 112
>pdb|1WWR|A Chain A, Crystal Structure Of Trna Adenosine Deaminase Tada From
Aquifex Aeolicus
pdb|1WWR|B Chain B, Crystal Structure Of Trna Adenosine Deaminase Tada From
Aquifex Aeolicus
pdb|1WWR|C Chain C, Crystal Structure Of Trna Adenosine Deaminase Tada From
Aquifex Aeolicus
pdb|1WWR|D Chain D, Crystal Structure Of Trna Adenosine Deaminase Tada From
Aquifex Aeolicus
Length = 171
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 15 FMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQW 74
F+ +A+++AK A + EVPVG +I+++G++I M AI +
Sbjct: 26 FLKVALREAKRAFEKGEVPVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACRRL 85
Query: 75 QKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSL 133
L C LYVT EPCIMC+ AL + I++V + ++K GG S+ ++
Sbjct: 86 NTKYLEG---------CELYVTLEPCIMCSYALVLSRIEKVIFSALDKKHGGVVSVFNI 135
>pdb|1Z3A|A Chain A, Crystal Structure Of Trna Adenosine Deaminase Tada From
Escherichia Coli
pdb|1Z3A|B Chain B, Crystal Structure Of Trna Adenosine Deaminase Tada From
Escherichia Coli
Length = 168
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 15 FMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQW 74
+M A+ AK A D EVPVG V++ + +VI + A+
Sbjct: 12 WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMAL------- 64
Query: 75 QKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSL 133
++ GL + LYVT EPC+MCA A+ I V +G + K G GS++ +
Sbjct: 65 RQGGLVMQNY--RLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDV 121
>pdb|3OCQ|A Chain A, Crystal Structure Of Trna-Specific Adenosine Deaminase
From Salmonella Enterica
Length = 183
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 58/133 (43%), Gaps = 10/133 (7%)
Query: 11 DTLAFMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVL 70
D +M A+ AK A D EVPVG V++ + +VI + A+
Sbjct: 18 DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMAL--- 74
Query: 71 LDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSI 130
++ GL + LYVT EPC+MCA A+ I V +G + K G GS+
Sbjct: 75 ----RQGGLVLQNY--RLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSL 128
Query: 131 LSLHLSDSKMLNR 143
+ + L M +R
Sbjct: 129 IDV-LHHPGMNHR 140
>pdb|1WKQ|A Chain A, Crystal Structure Of Bacillus Subtilis Guanine Deaminase.
The First Domain-Swapped Structure In The Cytidine
Deaminase Superfamily
pdb|1WKQ|B Chain B, Crystal Structure Of Bacillus Subtilis Guanine Deaminase.
The First Domain-Swapped Structure In The Cytidine
Deaminase Superfamily
Length = 164
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 33/89 (37%), Gaps = 15/89 (16%)
Query: 33 PVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDV---LLDQWQKNGLSQSEIAEKFS 89
P G VI++DG +I + AI +L +Q
Sbjct: 33 PFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQ------------LD 80
Query: 90 KCCLYVTCEPCIMCAAALSILGIKEVYYG 118
C LY +CEPC MC A+ K V+Y
Sbjct: 81 DCILYTSCEPCPMCLGAIYWARPKAVFYA 109
>pdb|1TIY|A Chain A, X-Ray Structure Of Guanine Deaminase From Bacillus
Subtilis Northeast Structural Genomics Consortium Target
Sr160
pdb|1TIY|B Chain B, X-Ray Structure Of Guanine Deaminase From Bacillus
Subtilis Northeast Structural Genomics Consortium Target
Sr160
Length = 164
Score = 32.3 bits (72), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 32/89 (35%), Gaps = 15/89 (16%)
Query: 33 PVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDV---LLDQWQKNGLSQSEIAEKFS 89
P G VI++DG +I + AI +L +Q
Sbjct: 25 PFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQ------------LD 72
Query: 90 KCCLYVTCEPCIMCAAALSILGIKEVYYG 118
C LY +CEPC C A+ K V+Y
Sbjct: 73 DCILYTSCEPCPXCLGAIYWARPKAVFYA 101
>pdb|2HVV|A Chain A, Crystal Structure Of Dcmp Deaminase From Streptococcus
Mutans
pdb|2HVV|B Chain B, Crystal Structure Of Dcmp Deaminase From Streptococcus
Mutans
pdb|2HVW|A Chain A, Crystal Structure Of Dcmp Deaminase From Streptococcus
Mutans
pdb|2HVW|B Chain B, Crystal Structure Of Dcmp Deaminase From Streptococcus
Mutans
pdb|2HVW|C Chain C, Crystal Structure Of Dcmp Deaminase From Streptococcus
Mutans
Length = 184
Score = 30.0 bits (66), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 93 LYVTCEPCIMCAAALSILGIKEVYYGCA 120
+YVT PCI C AL G+K++ Y A
Sbjct: 126 IYVTHFPCINCTKALLQAGVKKITYNTA 153
>pdb|1P6O|A Chain A, The Crystal Structure Of Yeast Cytosine Deaminase Bound To
4(R)-Hydroxyl-3,4-Dihydropyrimidine At 1.14 Angstroms.
pdb|1P6O|B Chain B, The Crystal Structure Of Yeast Cytosine Deaminase Bound To
4(R)-Hydroxyl-3,4-Dihydropyrimidine At 1.14 Angstroms.
pdb|1RB7|A Chain A, Yeast Cytosine Deaminase Crystal Form P212121 With Sodium
Acetate.
pdb|1RB7|B Chain B, Yeast Cytosine Deaminase Crystal Form P212121 With Sodium
Acetate
Length = 161
Score = 28.9 bits (63), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 12/99 (12%)
Query: 16 MDLAIQQAKLALDSLEVPVGCVIL--EDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQ 73
MD+A ++A L VP+G ++ +DG V+ + +
Sbjct: 18 MDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL------ 71
Query: 74 WQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGI 112
+ G + ++ + LY T PC MC A+ + GI
Sbjct: 72 -ENCGRLEGKV---YKDTTLYTTLSPCDMCTGAIIMYGI 106
>pdb|1VQ2|A Chain A, Crystal Structure Of T4-Bacteriophage Deoxycytidylate
Deaminase, Mutant R115e
Length = 193
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 93 LYVTCEPCIMCAAALSILGIKEVYY 117
+YVT PC CA A++ GIK++ Y
Sbjct: 125 MYVTLSPCPDCAKAIAQSGIKKLVY 149
>pdb|1UAQ|A Chain A, The Crystal Structure Of Yeast Cytosine Deaminase
pdb|1UAQ|B Chain B, The Crystal Structure Of Yeast Cytosine Deaminase
Length = 158
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 12/99 (12%)
Query: 16 MDLAIQQAKLALDSLEVPVGCVIL--EDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQ 73
MD+A ++A L VP+G ++ +DG V+ + +
Sbjct: 15 MDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL------ 68
Query: 74 WQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGI 112
+ G + ++ + LY T PC MC A+ + GI
Sbjct: 69 -ENCGRLEGKV---YKDTTLYTTLSPCDMCTGAIIMYGI 103
>pdb|3QO6|A Chain A, Crystal Structure Analysis Of The Plant Protease Deg1
pdb|3QO6|B Chain B, Crystal Structure Analysis Of The Plant Protease Deg1
pdb|3QO6|C Chain C, Crystal Structure Analysis Of The Plant Protease Deg1
Length = 348
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 6 EEWSPDTLAFMDLAIQQAKLALDSLEVPVGC 36
+E +P + +LA++Q LD LEVP G
Sbjct: 24 QENTPSVVYITNLAVRQDAFTLDVLEVPQGS 54
>pdb|1YSD|A Chain A, Yeast Cytosine Deaminase Double Mutant
pdb|1YSD|B Chain B, Yeast Cytosine Deaminase Double Mutant
Length = 161
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 12/99 (12%)
Query: 16 MDLAIQQAKLALDSLEVPVGCVIL--EDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQ 73
MD+A ++A L VP+G ++ +DG V+ + +
Sbjct: 18 MDIAYEEALLGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL------ 71
Query: 74 WQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGI 112
+ G + ++ + LY T PC MC A+ + GI
Sbjct: 72 -ENCGRLEGKV---YKDTTLYTTLSPCDMCTGAIIMYGI 106
>pdb|1YSB|A Chain A, Yeast Cytosine Deaminase Triple Mutant
pdb|1YSB|B Chain B, Yeast Cytosine Deaminase Triple Mutant
Length = 161
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 12/99 (12%)
Query: 16 MDLAIQQAKLALDSLEVPVGCVIL--EDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQ 73
MD+A ++A L VP+G ++ +DG V+ + +
Sbjct: 18 MDIAYEEALLGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL------ 71
Query: 74 WQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGI 112
+ G + ++ + LY T PC MC A+ + GI
Sbjct: 72 -ENCGRLEGKV---YKDTTLYTTLSPCDMCTGAIIMYGI 106
>pdb|2O3K|A Chain A, Yeast Cytosine Deaminase D92e Triple Mutant Bound To
Transition State Analogue Hpy
pdb|2O3K|B Chain B, Yeast Cytosine Deaminase D92e Triple Mutant Bound To
Transition State Analogue Hpy
Length = 161
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 12/99 (12%)
Query: 16 MDLAIQQAKLALDSLEVPVGCVIL--EDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQ 73
MD+A ++A L VP+G ++ +DG V+ + +
Sbjct: 18 MDIAYEEALLGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL------ 71
Query: 74 WQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGI 112
+ G + ++ + LY T PC MC A+ + GI
Sbjct: 72 -ENCGRLEGKV---YKDTTLYTTLSPCEMCTGAIIMYGI 106
>pdb|3HKM|A Chain A, Crystal Structure Of Rice(Oryza Sativa) Rrp46
pdb|3HKM|B Chain B, Crystal Structure Of Rice(Oryza Sativa) Rrp46
pdb|3HKM|C Chain C, Crystal Structure Of Rice(Oryza Sativa) Rrp46
Length = 246
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 23 AKLALDSLEVPVGCVILEDGKVI 45
A + L L V +GC +LEDG+VI
Sbjct: 130 AGIPLKHLAVAIGCGVLEDGEVI 152
>pdb|3G8Q|A Chain A, A Cytidine Deaminase Edits C-To-U In Transfer Rnas In
Archaea
pdb|3G8Q|B Chain B, A Cytidine Deaminase Edits C-To-U In Transfer Rnas In
Archaea
pdb|3G8Q|C Chain C, A Cytidine Deaminase Edits C-To-U In Transfer Rnas In
Archaea
pdb|3G8Q|D Chain D, A Cytidine Deaminase Edits C-To-U In Transfer Rnas In
Archaea
Length = 278
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 92 CLYVTCEPCIMCAAALSILGIKEVYY 117
++VT PC+ CA L+ G+ V Y
Sbjct: 59 VVFVTARPCLYCARELAEAGVAGVVY 84
>pdb|2W4L|A Chain A, Human Dcmp Deaminase
pdb|2W4L|B Chain B, Human Dcmp Deaminase
pdb|2W4L|C Chain C, Human Dcmp Deaminase
pdb|2W4L|D Chain D, Human Dcmp Deaminase
pdb|2W4L|E Chain E, Human Dcmp Deaminase
pdb|2W4L|F Chain F, Human Dcmp Deaminase
Length = 178
Score = 25.8 bits (55), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 91 CCLYVTCEPCIMCAAALSILGIKEVYY 117
C +YV PC CA + GIKEV +
Sbjct: 98 CSMYVALFPCNECAKLIIQAGIKEVIF 124
>pdb|2G84|A Chain A, Cytidine And Deoxycytidylate Deaminase Zinc-Binding Region
From Nitrosomonas Europaea.
pdb|2G84|B Chain B, Cytidine And Deoxycytidylate Deaminase Zinc-Binding Region
From Nitrosomonas Europaea
Length = 197
Score = 25.8 bits (55), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 85 AEKFSKCCLYVTCEPCIMCAAALSILGIKEV 115
A+ C L + EPC+MC A+ G++ +
Sbjct: 99 ADGLPACELVTSAEPCVMCFGAVIWSGVRSL 129
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,676,813
Number of Sequences: 62578
Number of extensions: 106636
Number of successful extensions: 219
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 190
Number of HSP's gapped (non-prelim): 23
length of query: 146
length of database: 14,973,337
effective HSP length: 90
effective length of query: 56
effective length of database: 9,341,317
effective search space: 523113752
effective search space used: 523113752
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 46 (22.3 bits)