BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032169
(146 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 21/139 (15%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFFCDSII 67
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + D + F + +I
Sbjct: 303 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLI 362
Query: 68 SXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLAR 127
+ D +EEI + AF VFD +G+G+I++ EL+ V+
Sbjct: 363 ----------------MMARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAELRHVMTN 403
Query: 128 LG--LWDEEKQPRLQKHDL 144
LG L DEE +++ D+
Sbjct: 404 LGEKLTDEEVDEMIREADI 422
Score = 40.4 bits (93), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 91 DDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
D +E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 332
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
D + F D++GDG +++EEL V+ + + T EEL+ ++ + ++ FDEFL
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFL- 69
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
S+++ V D +EE L +AF VFD + +G+I++ EL
Sbjct: 70 ---SLMA------------------KKVKDTDAEEE---LKEAFKVFDKDQNGYISASEL 105
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE + +++ DL
Sbjct: 106 RHVMINLGEKLTDEEVEQMIKEADL 130
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARL 128
+E+I D +AF +FD +GDG IT EEL +V+ L
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSL 39
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI +AF VFD +G+GFI++ EL
Sbjct: 72 MM----------------------ARKMKDTDSEEEI---REAFRVFDKDGNGFISAAEL 106
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 107 RHVMTNLGEKLTDEEVDEMIRESDI 131
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 41
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL- 370
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 371 ---------------------TMMARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 406
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 407 RHVMTNLGEKLTDEEVDEMIREADI 431
Score = 40.0 bits (92), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 91 DDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
D +E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 341
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 313 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL- 371
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 372 ---------------------TMMARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 407
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 408 RHVMTNLGEKLTDEEVDEMIREADI 432
Score = 40.0 bits (92), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 91 DDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
D +E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 342
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL- 370
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 371 ---------------------TMMARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 406
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 407 RHVMTNLGEKLTDEEVDEMIREADI 431
Score = 40.0 bits (92), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 91 DDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
D +E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 341
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL- 369
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 370 ---------------------TMMARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 405
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 406 RHVMTNLGEKLTDEEVDEMIREADI 430
Score = 40.0 bits (92), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 91 DDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
D +E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 340
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+GFI++ EL
Sbjct: 72 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGFISAAEL 106
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 107 RHVMTNLGEKLTDEEVDEMIREADI 131
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 41
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+GFI++ EL
Sbjct: 72 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGFISAAEL 106
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 107 RHVMTNLGEKLTDEEVDEMIREADI 131
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 41
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+GFI++ EL
Sbjct: 71 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGFISAAEL 105
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 106 RHVMTNLGEKLTDEEVDEMIREADI 130
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI +AF VFD +G+GFI++ EL
Sbjct: 71 MM----------------------ARKMKDTDSEEEI---REAFRVFDKDGNGFISAAEL 105
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 106 RHVMTNLGEKLTDEEVDEMIREADI 130
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL- 370
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 371 ---------------------TMMARWMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 406
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 407 RHVMTNLGEKLTDEEVDEMIREADI 431
Score = 40.0 bits (92), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 91 DDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
D +E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 341
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D DS +E L +AF VFD +G+GFI++ EL
Sbjct: 71 LMARKMK---------------------DTDSEEE----LKEAFRVFDKDGNGFISAAEL 105
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 106 RHVMTNLGEKLTDEEVDEMIREADV 130
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
DE+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 6 DEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 67
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D DS +E L +AF VFD +G+GFI++ EL
Sbjct: 68 LMARKMK---------------------DTDSEEE----LKEAFRVFDKDGNGFISAAEL 102
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 103 RHVMTNLGEKLTDEEVDEMIREADV 127
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
DE+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 3 DEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 37
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 72 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 106
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 107 RHVMTNLGEKLTDEEVDEMIREADI 131
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 41
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 72 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 106
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 107 RHVMTNLGEKLTDEEVDQMIREADI 131
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 41
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 72 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 106
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 107 RHVMTNLGEKLTDEEVDEMIREADI 131
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 41
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 69 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 103
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 104 RHVMTNLGEKLTDEEVDEMIREADI 128
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 38
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 72 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 106
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 107 RHVMTNLGEKLTDEEVDEMIREADI 131
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 41
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 15 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 74
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 75 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 109
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 110 RHVMTNLGEKLTDEEVDEMIREADI 134
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 10 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 44
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 13 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 72
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 73 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 107
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 108 RHVMTNLGEKLTDEEVDEMIREADI 132
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 8 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 42
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 72 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 106
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 107 RHVMTNLGEKLTDEEVDEMIREADI 131
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 41
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 67 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 101
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 102 RHVMTNLGEKLTDEEVDEMIREADI 126
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 36
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 338 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 372
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 373 RHVMTNLGEKLTDEEVDEMIREADI 397
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 307
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 338 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 372
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 373 RHVMTNLGEKLTDEEVDEMIREADI 397
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 307
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI +AF VFD +G+G+I++ EL
Sbjct: 72 MM----------------------ARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAEL 106
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 107 RHVMTNLGEXLTDEEVDEMIREADI 131
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 41
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI +AF VFD +G+G+I++ EL
Sbjct: 71 MM----------------------ARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAEL 105
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 106 RHVMTNLGEXLTDEEVDEMIREADI 130
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI +AF VFD +G+G+I++ EL
Sbjct: 71 MM----------------------ARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAEL 105
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 106 RHVMTNLGEKLTDEEVDEMIREADI 130
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 67
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 68 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 102
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 103 RHVMTNLGEKLTDEEVDEMIREADI 127
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 3 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 37
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 275 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 334
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 335 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 369
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 370 RHVMTNLGEKLTDEEVDEMIREADI 394
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 270 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 304
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 69 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 103
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 104 RHVMTNLGEKLTDEEVDEMIREADI 128
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 38
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 17 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 76
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 77 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 111
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 112 RHVMTNLGEKLTDEEVDEMIREADI 136
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 12 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 46
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI +AF VFD +G+G+I++ EL
Sbjct: 71 MM----------------------ARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAEL 105
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 106 RHVMTNLGEKLTDEEVDEMIREADI 130
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 71 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 105
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 106 RHVMTNLGEKLTDEEVDEMIREADI 130
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 69
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI +AF VFD +G+G+I++ EL
Sbjct: 70 MM----------------------ARKMKDTDSEEEIR---EAFRVFDKDGNGYISAAEL 104
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 105 RHVMTNLGEKLTDEEVDEMIREADI 129
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 5 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 39
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 69 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 103
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 104 RHVMTNLGEKLTDEEVDEMIREADI 128
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 38
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D+ EE L +AF VFD +G+GFI++ EL
Sbjct: 71 LMARKMK-----------------------DTDSEE--KLKEAFRVFDKDGNGFISAAEL 105
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 106 RHVMTNLGEKLTDEEVDEMIREADV 130
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
DE+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 6 DEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 33/135 (24%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VFD +G+G+I++ EL
Sbjct: 71 MM----------------------ARKMKDTDSEEEIRE---AFRVFDKDGNGYISAAEL 105
Query: 122 QSVLARLG--LWDEE 134
+ V+ LG L DEE
Sbjct: 106 RHVMTNLGEKLTDEE 120
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 29/50 (58%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFD 57
+++ F D++G+G +S EL V+ +G T EE++ ++ + ++ D
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGD 133
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 35/145 (24%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ DS +E + +AF VFD +G+GFI++ EL
Sbjct: 71 MMARKMK-----------------------DSEEE----IREAFRVFDKDGNGFISAAEL 103
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 104 RHVMTNLGEKLTDEEVDEMIREADI 128
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 34/135 (25%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D+ EEI + AF VFD +G+G+I++ EL
Sbjct: 67 MMARKMK-----------------------DTDSEEIRE---AFRVFDKDGNGYISAAEL 100
Query: 122 QSVLARLG--LWDEE 134
+ V+ LG L DEE
Sbjct: 101 RHVMTNLGEKLTDEE 115
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 36
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 31/57 (54%)
Query: 1 MAPLTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFD 57
M + +++ F D++G+G +S EL V+ +G T EE++ ++ + ++ D
Sbjct: 72 MKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGD 128
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 33/136 (24%)
Query: 7 NDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
+ + F D++GDG ++ EL V+ +G + T EL ++ + ++ F EFL
Sbjct: 10 TEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFL 69
Query: 61 FFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEE 120
+ D +EEI + AF VFD +G+GF+++ E
Sbjct: 70 GMM----------------------ARKMKDTDNEEEIRE---AFRVFDKDGNGFVSAAE 104
Query: 121 LQSVLARLG--LWDEE 134
L+ V+ RLG L DEE
Sbjct: 105 LRHVMTRLGEKLSDEE 120
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQPR 138
+E++++ +AFS+FD +GDG IT+ EL +V+ LG E + R
Sbjct: 6 EEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELR 49
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALV 49
+++ F D++G+G VS EL V+ R+G + EE++ ++
Sbjct: 84 EIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMI 125
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 44.7 bits (104), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL- 369
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ +EEI + AF VFD +G+G+I++ EL
Sbjct: 370 ---------------------TMMARKMKYTDSEEEIRE---AFRVFDKDGNGYISAAEL 405
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 406 RHVMTNLGEKLTDEEVDEMIREADI 430
Score = 40.0 bits (92), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 91 DDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
D +E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 340
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 44.7 bits (104), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL- 370
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ +EEI + AF VFD +G+G+I++ EL
Sbjct: 371 ---------------------TMMARKMKYTDSEEEIRE---AFRVFDKDGNGYISAAEL 406
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 407 RHVMTNLGEKLTDEEVDEMIREADI 431
Score = 40.0 bits (92), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 91 DDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
D +E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 341
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL- 369
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ +EEI + AF VFD +G+G+I++ EL
Sbjct: 370 ---------------------TMMARKMKYTDSEEEIRE---AFRVFDKDGNGYISAAEL 405
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 406 RHVMTNLGEKLTDEEVDEMIREADI 430
Score = 40.0 bits (92), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 91 DDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
D +E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 340
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL- 370
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ +EEI + AF VFD +G+G+I++ EL
Sbjct: 371 ---------------------TMMARKMKYTDSEEEIRE---AFRVFDKDGNGYISAAEL 406
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L DEE +++ D+
Sbjct: 407 RHVMTNLGEKLTDEEVDEMIREADI 431
Score = 40.0 bits (92), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 91 DDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
D +E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 341
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 33/146 (22%)
Query: 7 NDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
++ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 61 FFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEE 120
+ D DS +E L +AF VFD + +GFI++ E
Sbjct: 71 NLMARKMK---------------------DTDSEEE----LKEAFRVFDKDQNGFISAAE 105
Query: 121 LQSVLARLG--LWDEEKQPRLQKHDL 144
L+ V+ LG L DEE +++ D+
Sbjct: 106 LRHVMTNLGEKLTDEEVDEMIREADV 131
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
D++IS+ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 7 DDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLG 41
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 33/146 (22%)
Query: 7 NDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
++ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 61 FFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEE 120
+ D DS +E L +AF VFD + +GFI++ E
Sbjct: 71 NLMARKMK---------------------DTDSEEE----LKEAFRVFDKDQNGFISAAE 105
Query: 121 LQSVLARLG--LWDEEKQPRLQKHDL 144
L+ V+ LG L DEE +++ D+
Sbjct: 106 LRHVMTNLGEKLTDEEVDEMIREADV 131
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+++IS+ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 7 EDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLG 41
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 28/128 (21%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F+ D +G G +S +EL V+ +G + T EEL+A++E+ ++ F+EFL
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ +D+ + +L F +FD N DGFI EEL
Sbjct: 81 MM----------------------VRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEEL 118
Query: 122 QSVLARLG 129
+L G
Sbjct: 119 GEILRATG 126
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LCFDEFLF 61
+L F D+N DG + +EEL +L G H E++E L++ + FDEFL
Sbjct: 97 ELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLK 156
Query: 62 FCDSI 66
+ +
Sbjct: 157 MMEGV 161
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E I++ AF +FD +G G I+++EL +V+ LG
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG 50
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 28/128 (21%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F+ D +G G +S +EL V+ +G + T EEL+A++E+ ++ F+EFL
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ +D+ + +L F +FD N DGFI EEL
Sbjct: 81 MM----------------------VRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEEL 118
Query: 122 QSVLARLG 129
+L G
Sbjct: 119 GEILRATG 126
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LCFDEFLF 61
+L F D+N DG + +EEL +L G H T E++E L++ + FDEFL
Sbjct: 97 ELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLK 156
Query: 62 FCDSI 66
+ +
Sbjct: 157 MMEGV 161
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E I++ AF +FD +G G I+++EL +V+ LG
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG 50
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 28/128 (21%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F+ D +G G +S +EL V+ +G + T EEL+A++E+ ++ F+EFL
Sbjct: 18 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ +D+ + +L F +FD N DGFI EEL
Sbjct: 78 MM----------------------VRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEEL 115
Query: 122 QSVLARLG 129
+L G
Sbjct: 116 GEILRATG 123
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LCFDEFLF 61
+L F D+N DG + +EEL +L G H T E++E L++ + FDEFL
Sbjct: 94 ELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLK 153
Query: 62 FCDSI 66
+ +
Sbjct: 154 MMEGV 158
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E I++ AF +FD +G G I+++EL +V+ LG
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG 47
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 30/144 (20%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F+ D +G G +S++EL V+ +G T EEL+A++E+ ++ F+EFL
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ +D+ + +L + F +FD N DG+I +EEL
Sbjct: 78 MM----------------------VRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEEL 115
Query: 122 QSVLARLG--LWDEEKQPRLQKHD 143
+ G + DEE + ++ D
Sbjct: 116 AEIFRASGEHVTDEEIESLMKDGD 139
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVE------KPSLCFDE 58
+ +L F DRN DG + EEL + G H T EE+E+L++ + FDE
Sbjct: 91 SEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDE 150
Query: 59 FLFFCDSI 66
FL + +
Sbjct: 151 FLKMMEGV 158
Score = 29.3 bits (64), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E I++ AF +FD +G G I+ +EL +V+ LG
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLG 47
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 6 ANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS-----LCFDEFL 60
A+D++RIF++ D NGDG +SL EL L +G E + E + + F+EF+
Sbjct: 2 ADDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFI 61
Query: 61 FFCDS 65
FC++
Sbjct: 62 SFCNA 66
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQPRL 139
D+ + F FD NGDG I+ EL L LG ++ R+
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRM 43
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 6 ANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS-----LCFDEFL 60
A+D++RIF++ D NGDG +SL EL L +G E + E + + F+EF+
Sbjct: 1 ADDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFI 60
Query: 61 FFCDS 65
FC++
Sbjct: 61 SFCNA 65
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQPRL 139
D+ + F FD NGDG I+ EL L LG ++ R+
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRM 42
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 28/128 (21%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F+ D +G G +S +EL V+ +G + T EEL+A++E+ ++ F+EFL
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ +D+ + +L F +FD N DGFI EEL
Sbjct: 81 MM----------------------VRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEEL 118
Query: 122 QSVLARLG 129
+L G
Sbjct: 119 GEILRATG 126
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 9/62 (14%)
Query: 11 RIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LCFDEFLFFCD 64
RIF D+N DG + +EEL +L G H T E++E L++ + FDEFL +
Sbjct: 103 RIF---DKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Query: 65 SI 66
+
Sbjct: 160 GV 161
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E I++ AF +FD +G G I+++EL +V+ LG
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG 50
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ + DS +E L +AF VFD +G+G I++ EL
Sbjct: 71 LMARKMK---------------------EQDSEEE----LIEAFKVFDRDGNGLISAAEL 105
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L D+E +++ D+
Sbjct: 106 RHVMTNLGEKLTDDEVDEMIREADI 130
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AF++FD +GDG IT++EL +V+ LG
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLG 40
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ + DS +E L +AF VFD +G+G I++ EL
Sbjct: 71 LMARKMK---------------------EQDSEEE----LIEAFKVFDRDGNGLISAAEL 105
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V+ LG L D+E +++ D+
Sbjct: 106 RHVMTNLGEKLTDDEVDEMIREADI 130
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AF++FD +GDG IT++EL +V+ LG
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLG 40
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 30/144 (20%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F+ D +G G +S++EL V+ +G T EEL+A++E+ ++ F+EFL
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ +D+ + +L + F +FD N DG+I +EEL
Sbjct: 78 MM----------------------VRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEEL 115
Query: 122 QSVLARLG--LWDEEKQPRLQKHD 143
+ G + DEE + ++ D
Sbjct: 116 AEIFRASGEHVTDEEIESLMKDGD 139
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVE------KPSLCFDEFLF 61
+L +F DRN DG + EEL + G H T EE+E+L++ + FDEFL
Sbjct: 94 ELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLK 153
Query: 62 FCDSI 66
+ +
Sbjct: 154 MMEGV 158
Score = 29.3 bits (64), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E I++ AF +FD +G G I+ +EL +V+ LG
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLG 47
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 28/128 (21%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F+ D +G G +S +EL V+ +G + T EEL+A++E+ ++ F+EFL
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ +D+ + +L F +FD N DGFI EEL
Sbjct: 81 MM----------------------VRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEEL 118
Query: 122 QSVLARLG 129
+L G
Sbjct: 119 GEILRATG 126
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LCFDEFLF 61
+L+ F D+N DG + +EEL +L G H T E++E L++ + FDEFL
Sbjct: 97 ELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLK 156
Query: 62 FCDSI 66
+ +
Sbjct: 157 MMEGV 161
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E I++ AF +FD +G G I+++EL +V+ LG
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG 50
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V +G + T EL+ + + ++ F EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFL- 69
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
D DS +E + +AF VFD +G+G+I++ EL
Sbjct: 70 --------------------TXXARCXKDTDSEEE----IREAFRVFDKDGNGYISAAEL 105
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V LG L DEE +++ D+
Sbjct: 106 RHVXTNLGEKLTDEEVDEXIREADI 130
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 27/35 (77%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V LG
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLG 40
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
DE+IS+ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 6 DEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLG 40
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 26/43 (60%)
Query: 7 NDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALV 49
++ + F D++GDG ++ +EL V+ +G + T EL+ ++
Sbjct: 10 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMI 52
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V +G + T EL+ + + ++ F EFL
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFL- 70
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
D DS +E + +AF VFD +G+G+I++ EL
Sbjct: 71 --------------------TXXARKXKDTDSEEE----IREAFRVFDKDGNGYISAAEL 106
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V LG L DEE +++ D+
Sbjct: 107 RHVXTNLGEKLTDEEVDQXIREADI 131
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 27/35 (77%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V LG
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLG 41
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 33/145 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V +G + T EL+ + + ++ F EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFL- 69
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
D DS +E + +AF VFD +G+G+I++ EL
Sbjct: 70 --------------------TXXARKXKDTDSEEE----IREAFRVFDKDGNGYISAAEL 105
Query: 122 QSVLARLG--LWDEEKQPRLQKHDL 144
+ V LG L DEE +++ D+
Sbjct: 106 RHVXTNLGEKLTDEEVDEXIREADI 130
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 27/35 (77%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V LG
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLG 40
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 31/131 (23%)
Query: 7 NDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS--------LCFDE 58
ND + F DR GD ++L ++ ++ +G + T E+ ++ PS + F+E
Sbjct: 4 NDFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKITFEE 63
Query: 59 FLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITS 118
FL + + + D G E D + VFD G+G +
Sbjct: 64 FLPMLQAAAN---------------------NKDQGTFE--DFVEGLRVFDKEGNGTVMG 100
Query: 119 EELQSVLARLG 129
EL+ VLA LG
Sbjct: 101 AELRHVLATLG 111
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 96 EEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+EI+D +AF +FD GD IT ++ ++ LG
Sbjct: 1 DEINDFKEAFLLFDRTGDAKITLSQVGDIVRALG 34
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 32/117 (27%)
Query: 21 DGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLFFCDSIISXXXXXX 74
DG +S +EL V+ +G + T EEL+ ++++ ++ FDEFL +
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMK------ 86
Query: 75 XXXXXXXXXXXXXXVDDDSG--DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
DD G +EE+SDL F +FD N DG+I EEL+ +L G
Sbjct: 87 ---------------DDSKGKTEEELSDL---FRMFDKNADGYIDLEELKIMLQATG 125
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LCFDE 58
T +L +F D+N DG + LEEL +L+ G T +++E L++ + +DE
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 59 FLFFCDSI 66
FL F +
Sbjct: 153 FLEFMKGV 160
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 40.0 bits (92), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 33/135 (24%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ ++L V+ +G + T EL+ ++ + ++ F +FL
Sbjct: 312 EFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFL- 370
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ D +EEI + AF VF +G+G+I++ +L
Sbjct: 371 ---------------------TMMARKMKDTDSEEEIRE---AFRVFGKDGNGYISAAQL 406
Query: 122 QSVLARLG--LWDEE 134
+ V+ LG L DEE
Sbjct: 407 RHVMTNLGEKLTDEE 421
Score = 38.9 bits (89), Expect = 0.001, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 29/39 (74%)
Query: 91 DDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
D +E+I++ +AFS+FD +GDG IT+++L +V+ LG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLG 341
Score = 26.6 bits (57), Expect = 5.4, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 27/50 (54%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSL 54
+ +++ F ++G+G +S +L V+ +G T EE++ ++ + +
Sbjct: 382 SEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGI 431
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 32/117 (27%)
Query: 21 DGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLFFCDSIISXXXXXX 74
DG +S +EL V+ +G + T EEL+ ++++ ++ FDEFL
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM----------- 81
Query: 75 XXXXXXXXXXXXXXVDDDSG--DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
DD G +EE+SDL F +FD N DG+I EEL+ +L G
Sbjct: 82 ----------VRSMKDDSKGKSEEELSDL---FRMFDKNADGYIDLEELKIMLQATG 125
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LCFDE 58
+ +L +F D+N DG + LEEL +L+ G T +++E L++ + +DE
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 59 FLFFCDSI 66
FL F +
Sbjct: 153 FLEFMKGV 160
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 32/117 (27%)
Query: 21 DGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLFFCDSIISXXXXXX 74
DG +S +EL V+ +G + T EEL+ ++++ ++ FDEFL
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM----------- 81
Query: 75 XXXXXXXXXXXXXXVDDDSG--DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
DD G +EE+SDL F +FD N DG+I EEL+ +L G
Sbjct: 82 ----------VRSMKDDSKGKTEEELSDL---FRMFDKNADGYIDLEELKIMLQATG 125
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LCFDE 58
T +L +F D+N DG + LEEL +L+ G T +++E L++ + +DE
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 59 FLFFCDSI 66
FL F +
Sbjct: 153 FLEFMKGV 160
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 31/42 (73%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQ 136
+E+I++ +AFS++D +GDG IT++EL +V+ LGL E +
Sbjct: 6 EEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAE 47
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++GDG ++ +EL V+ +G++ T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 62 FCDSII 67
I+
Sbjct: 71 MMARIM 76
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 69
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
Score = 29.6 bits (65), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
Score = 29.6 bits (65), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ +AFS+FD +GDG IT++EL +V+ LG
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 41
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
+ + F D++GDG ++ +EL V+ +G + T EL+ ++ + ++ F EFL
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 94 GDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGL 130
GD+++S+ +AF +FD GFIT E LQ+VL + G+
Sbjct: 1 GDDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGV 37
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 7/44 (15%)
Query: 101 LYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQPRLQKHDL 144
L +AF FD G G+I LQ L LG RL+ H+
Sbjct: 81 LRQAFRTFDPEGTGYIPKAALQDALLNLG-------DRLKPHEF 117
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 32/117 (27%)
Query: 21 DGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLFFCDSIISXXXXXX 74
DG +S +EL V+ +G + T EEL+ ++++ ++ FDEFL
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM----------- 81
Query: 75 XXXXXXXXXXXXXXVDDDSG--DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
DD G +EE+SDL F +FD N DG+I +EL+ +L G
Sbjct: 82 ----------VRSMKDDSKGKSEEELSDL---FRMFDKNADGYIDLDELKIMLQATG 125
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 9 LQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVE 50
L +F D+N DG + L+EL +L+ G T +++E L++
Sbjct: 97 LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMK 138
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 32/117 (27%)
Query: 21 DGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLFFCDSIISXXXXXX 74
DG +S +EL V+ +G + T EEL+ ++++ ++ FDEFL
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM----------- 81
Query: 75 XXXXXXXXXXXXXXVDDDSG--DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
DD G +EE+SDL F +FD N DG+I +EL+ +L G
Sbjct: 82 ----------VRSMKDDSKGKSEEELSDL---FRMFDKNADGYIDLDELKIMLQATG 125
Score = 30.8 bits (68), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LCFDE 58
+ +L +F D+N DG + L+EL +L+ G T +++E L++ + +DE
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 59 FLFFCDSI 66
+L F +
Sbjct: 153 WLEFMKGV 160
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 31/133 (23%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS--------LCF 56
A+D + F DR GD ++ ++ + +G + T E+ ++ PS + F
Sbjct: 4 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITF 63
Query: 57 DEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFI 116
+EFL + + + D G E D + VFD G+G +
Sbjct: 64 EEFLPMLQAAAN---------------------NKDQGTFE--DFVEGLRVFDKEGNGTV 100
Query: 117 TSEELQSVLARLG 129
EL+ VLA LG
Sbjct: 101 MGAELRHVLATLG 113
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+L +AF VFD NGDG I++ EL+ VL +G
Sbjct: 84 ELLEAFKVFDKNGDGLISAAELKHVLTSIG 113
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELE 46
+L F+ D+NGDGL+S EL VL IG T ELE
Sbjct: 84 ELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQ 136
+E+I++ +AF++FD + +G I+S EL +V+ LGL E +
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAE 47
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+L +AF VFD NGDG I++ EL+ VL +G
Sbjct: 85 ELLEAFKVFDKNGDGLISAAELKHVLTSIG 114
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS 53
+L F+ D+NGDGL+S EL VL IG T E++ ++ + S
Sbjct: 85 ELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS 130
Score = 33.5 bits (75), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQ 136
+E+I++ +AF++FD + G I++ EL +V+ LGL E +
Sbjct: 7 EEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAE 48
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+L +AF VFD NGDG I++ EL+ VL +G
Sbjct: 84 ELLEAFKVFDKNGDGLISAAELKHVLTSIG 113
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQ 136
+E+I++ +AF++FD + +G I+S EL +V+ LGL E +
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAE 47
Score = 33.5 bits (75), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 4 LTAND----LQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS 53
L +ND L F+ D+NGDGL+S EL VL IG T E++ ++ + S
Sbjct: 76 LKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS 129
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 31/128 (24%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
+ + F D++ +G +S EL V+ +G+ + E+ L+ + + F EFL
Sbjct: 12 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 71
Query: 62 FCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEEL 121
+ S D E +L +AF VFD NGDG I++ EL
Sbjct: 72 LMSRQLK------------------------SNDSE-QELLEAFKVFDKNGDGLISAAEL 106
Query: 122 QSVLARLG 129
+ VL +G
Sbjct: 107 KHVLTSIG 114
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQ 136
+E+I++ +AF++FD + +G I+S EL +V+ LGL E +
Sbjct: 7 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAE 48
Score = 33.5 bits (75), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 4 LTAND----LQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS 53
L +ND L F+ D+NGDGL+S EL VL IG T E++ ++ + S
Sbjct: 77 LKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS 130
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 31/133 (23%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS--------LCF 56
A+D + F DR GD ++ ++ + +G + T E+ ++ PS + F
Sbjct: 6 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITF 65
Query: 57 DEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFI 116
+EFL + + + D G E D + VFD G+G +
Sbjct: 66 EEFLPMLQAAAN---------------------NKDQGTFE--DFVEGLRVFDKEGNGTV 102
Query: 117 TSEELQSVLARLG 129
EL+ VLA LG
Sbjct: 103 MGAELRHVLATLG 115
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGL 130
+E+ ++Y+AFS+FD+N DGF+ EL+ + LG
Sbjct: 19 EEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGF 54
Score = 25.8 bits (55), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 98 ISDLYKAFSVFDVNGDGFITSEELQSVLARLG--LWDEEKQPRLQKHDL 144
+ ++ +AF +FD + G I+ + L+ V LG L DEE + +++ DL
Sbjct: 95 LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDL 143
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLG--LWDEEKQPRLQKHDL 144
++ +AF VFD +G+G+I++ EL+ V+ LG L DEE +++ D+
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 52
Score = 29.6 bits (65), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 27/47 (57%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSL 54
+++ F D++G+G +S EL V+ +G T EE++ ++ + +
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 52
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 92 DSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEE 134
D ++E+ ++ +AF VFD +G+GFI+ +EL + + LG E
Sbjct: 29 DIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNE 71
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 26/44 (59%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK 51
+++ F+ DR+G+G +S +EL + +G ELE ++++
Sbjct: 37 EIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQR 80
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLG--LWDEEKQPRLQKHDL 144
++ +AF VFD +G+G+I++ EL+ V+ LG L DEE +++ D+
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 52
Score = 29.6 bits (65), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 27/47 (57%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSL 54
+++ F D++G+G +S EL V+ +G T EE++ ++ + +
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 52
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLG--LWDEEKQPRLQKHDL 144
++ +AF VFD +G+G+I++ EL+ V+ LG L DEE +++ D+
Sbjct: 9 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 55
Score = 29.6 bits (65), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 27/47 (57%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSL 54
+++ F D++G+G +S EL V+ +G T EE++ ++ + +
Sbjct: 9 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 55
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLG--LWDEEKQPRLQKHDL 144
++ +AF VFD +G+G+I++ EL+ V+ LG L DEE +++ D+
Sbjct: 7 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 53
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 27/47 (57%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSL 54
+++ F D++G+G +S EL V+ +G T EE++ ++ + +
Sbjct: 7 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 53
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLG--LWDEEKQPRLQKHDL 144
++ +AF VFD +G+G+I++ EL+ V+ LG L DEE +++ D+
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 49
Score = 29.3 bits (64), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 27/47 (57%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSL 54
+++ F D++G+G +S EL V+ +G T EE++ ++ + +
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 49
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLG--LWDEEKQPRLQKHDL 144
++ +AF VFD +G+G+I++ EL+ V+ LG L DEE +++ D+
Sbjct: 10 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 56
Score = 29.6 bits (65), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 28/50 (56%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFD 57
+++ F D++G+G +S EL V+ +G T EE++ ++ + + D
Sbjct: 10 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 59
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LCFDE 58
T +L +F D+N DG + LEEL +L+ G T +++E L++ + +DE
Sbjct: 8 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 67
Query: 59 FLFFCDSI 66
FL F +
Sbjct: 68 FLEFMKGV 75
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 90 DDDSG--DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
DD G +EE+SDL F +FD N DG+I EEL+ +L G
Sbjct: 2 DDSKGKTEEELSDL---FRMFDKNADGYIDLEELKIMLQATG 40
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLG--LWDEEKQPRLQKHDL 144
+L +AF VFD + +G+I++ EL+ V+ LG L DEE + +++ DL
Sbjct: 5 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADL 51
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 33/140 (23%)
Query: 13 FEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKP------SLCFDEFLFFCDSI 66
F + D+ G G ++ EL ++ +G + T EL+ L+ + L F EF C +
Sbjct: 16 FVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEF---CGIM 72
Query: 67 ISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLA 126
+ D+ +E + +AF +FD +GDGFI+ EL+ V+
Sbjct: 73 AKQMR------------------ETDTEEE----MREAFKIFDRDGDGFISPAELRFVMI 110
Query: 127 RLG--LWDEEKQPRLQKHDL 144
LG + DEE +++ D
Sbjct: 111 NLGEKVTDEEIDEMIREADF 130
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALV 49
T +++ F+ DR+GDG +S EL +V+ +G T EE++ ++
Sbjct: 81 TEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMI 125
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+I++ AF FD G G I + EL +++ LG
Sbjct: 6 EEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLG 40
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 32/117 (27%)
Query: 21 DGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLFFCDSIISXXXXXX 74
DG +S +EL V+ +G + T EEL+ ++++ ++ FDEFL
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM----------- 81
Query: 75 XXXXXXXXXXXXXXVDDDSG--DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
DD G +EE+SDL F ++D N DG+I +EL+ +L G
Sbjct: 82 ----------VRSMKDDSKGKSEEELSDL---FRMWDKNADGYIDLDELKIMLQATG 125
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LCFDE 58
+ +L +F D+N DG + L+EL +L+ G T +++E L++ + +DE
Sbjct: 93 SEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 59 FLFFCDSI 66
FL F +
Sbjct: 153 FLEFMKGV 160
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 1 MAPLTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------L 54
M + +L +F D+N DG + LEEL +L+ G T +++E L++ +
Sbjct: 1 MKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRI 60
Query: 55 CFDEFLFFCDSI 66
+DEFL F +
Sbjct: 61 DYDEFLEFMKGV 72
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Query: 96 EEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
EE+SDL F +FD N DG+I EEL+ +L G
Sbjct: 7 EELSDL---FRMFDKNADGYIDLEELKIMLQATG 37
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 21/125 (16%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFFCD 64
+A+ +Q F+ D++ DG VS+EEL L +G + T EL + K L EF
Sbjct: 3 SADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI--KGQLNAKEFDLATF 60
Query: 65 SIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSV 124
+ + E+ ++ AF D G+G I EL+ +
Sbjct: 61 KTVYRKPIK-------------------TPTEQSKEMLDAFRALDKEGNGTIQEAELRQL 101
Query: 125 LARLG 129
L LG
Sbjct: 102 LLNLG 106
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 13 FEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFD---EFLFFCDSIIS 68
F LD+ G+G + EL +L +G T E+E L+++ S+ D + F D +++
Sbjct: 82 FRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT 140
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 32/117 (27%)
Query: 21 DGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLFFCDSIISXXXXXX 74
DG +S +EL V+ +G + T EEL+ ++++ ++ FDEFL
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM----------- 81
Query: 75 XXXXXXXXXXXXXXVDDDSG--DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
DD G +EE+SDL F + D N DG+I +EL+ +L G
Sbjct: 82 ----------VRSMKDDSKGKSEEELSDL---FRMXDKNADGYIDLDELKIMLQATG 125
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 9 LQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LCFDEFLFF 62
L +F D+N DG + L+EL +L+ G T +++E L++ + +DEFL F
Sbjct: 97 LSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 156
Query: 63 CDSI 66
+
Sbjct: 157 MKGV 160
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQ 136
+E+I++ +AF++FD + +G I+S EL +V+ LGL E +
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAE 47
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 2 APLTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LC 55
P D +RIF++ D NGDG +S EL L+ +G T +E+ ++ + +
Sbjct: 6 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFIS 64
Query: 56 FDEFLFFC 63
FDEF F
Sbjct: 65 FDEFTDFA 72
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 96 EEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
++I+D + F FD NGDG I+S EL L LG
Sbjct: 8 QDIADRERIFKRFDTNGDGKISSSELGDALKTLG 41
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LCFDE 58
T +L +F D+N DG + LEEL +L+ G T +++E L++ + +DE
Sbjct: 13 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 72
Query: 59 FLFFCDSI 66
FL F +
Sbjct: 73 FLEFMKGV 80
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 90 DDDSG--DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
DD G +EE+SDL F +FD N DG+I EEL+ +L G
Sbjct: 7 DDSKGKTEEELSDL---FRMFDKNADGYIDLEELKIMLQATG 45
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARL 128
+E+I D +AF +FD +GDG IT EEL +V+ L
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSL 39
Score = 33.1 bits (74), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
D + F D++GDG +++EEL V+ + + T EEL+ ++ + ++ FDEFL
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFL 69
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 101 LYKAFSVFDVNGDGFITSEELQSVLARLG--LWDEEKQPRLQKHDL 144
+ +AF VFD +G+G+I++ +L+ V+ LG L DEE +++ D+
Sbjct: 9 IREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADI 54
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/46 (23%), Positives = 26/46 (56%)
Query: 9 LQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSL 54
++ F D++G+G +S +L V+ +G T EE++ ++ + +
Sbjct: 9 IREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADI 54
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARL 128
+E+I D +AF +FD +GDG IT EEL +V+ L
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSL 39
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
D + F D++GDG +++EEL V+ + + T EEL+ ++ + ++ FDEFL
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFL 69
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLG--LWDEEKQPRLQKHDL 144
+L +AF VFD + +G+I++ EL+ V+ LG L DEE + +++ DL
Sbjct: 10 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADL 56
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 20/124 (16%)
Query: 9 LQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFFCDSIIS 68
L+ +F+ +D + G ++ +EL L+R+G E++ L++ + + + + I +
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 71
Query: 69 XXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARL 128
E +L AFS FD +G G+IT +E+Q
Sbjct: 72 TVHLNKL--------------------EREENLVSAFSYFDKDGSGYITLDEIQQACKDF 111
Query: 129 GLWD 132
GL D
Sbjct: 112 GLDD 115
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+EEI L + F + D + G IT +EL+ L R+G
Sbjct: 6 EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVG 40
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLG--LWDEEKQPRLQKHDL 144
+L +AF VFD + +GFI++ EL+ V+ LG L DEE +++ D+
Sbjct: 5 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 51
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLG--LWDEEKQPRLQKHDL 144
+L +AF VFD +G+G I++ EL+ V+ LG L D+E +++ D+
Sbjct: 9 ELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADI 55
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 13 FEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFF 62
F+ DR+G+GL+S EL V+ +G T +E++ ++ + + D + +
Sbjct: 14 FKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINY 63
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 98 ISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+ DL AF FD +GDG IT +EL+ +A LG
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLG 36
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 28/47 (59%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSL 54
DLQ F D++GDG ++++EL + +G EEL+A++ + +
Sbjct: 7 DLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADV 53
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGL 130
+E+ ++Y+AFS+FD N DGF+ EL+ LG
Sbjct: 19 EEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGF 54
Score = 25.8 bits (55), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 98 ISDLYKAFSVFDVNGDGFITSEELQSVLARLG--LWDEEKQPRLQKHDL 144
+ ++ +AF +FD + G I+ + L+ V LG L DEE + +++ DL
Sbjct: 95 LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDL 143
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell
Death 6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell
Death 6 Protein From Leishmania Major Friedlin
Length = 191
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 9/62 (14%)
Query: 7 NDLQRI---FEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALV------EKPSLCFD 57
ND Q + F +D +G G +S+ ELN L GV F+L E L+ + FD
Sbjct: 24 NDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFD 83
Query: 58 EF 59
EF
Sbjct: 84 EF 85
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 31/41 (75%)
Query: 96 EEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQ 136
++I ++ +AFS+ DV+ DGF++ E+++++ +LG ++K+
Sbjct: 4 KQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKE 44
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 20/124 (16%)
Query: 9 LQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFFCDSIIS 68
L+ F +D + G ++ EEL L+R+G + E+ L + + + + + I +
Sbjct: 29 LKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKEFIAA 88
Query: 69 XXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARL 128
E L+ AF+ FD +G G+IT +ELQ
Sbjct: 89 TLHLNKI--------------------EREDHLFAAFTYFDKDGSGYITPDELQQACEEF 128
Query: 129 GLWD 132
G+ D
Sbjct: 129 GVED 132
Score = 29.3 bits (64), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+EEI+ L + F+ D + G IT EEL++ L R+G
Sbjct: 23 EEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVG 57
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 31/41 (75%)
Query: 96 EEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQ 136
++I ++ +AFS+ DV+ DGF++ E+++++ +LG ++K+
Sbjct: 3 KQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKE 43
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 31/41 (75%)
Query: 96 EEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQ 136
++I ++ +AFS+ DV+ DGF++ E+++++ +LG ++K+
Sbjct: 15 KQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKE 55
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 34.3 bits (77), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 31/41 (75%)
Query: 96 EEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQ 136
++I ++ +AFS+ DV+ DGF++ E+++++ +LG ++K+
Sbjct: 4 KQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKE 44
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 31/41 (75%)
Query: 96 EEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQ 136
++I ++ +AFS+ DV+ DGF++ E+++++ +LG ++K+
Sbjct: 1 KQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKE 41
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 3 PLTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFF 62
P + +RIF++ D NGDG +S EL L+ +G T +E++ ++ + D F+ F
Sbjct: 5 PQDKAERERIFKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISF 63
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 103 KAFSVFDVNGDGFITSEELQSVLARLG 129
+ F FD NGDG I++ EL L LG
Sbjct: 13 RIFKRFDANGDGKISAAELGEALKTLG 39
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 34.3 bits (77), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LCFDE 58
+ +L +F D+N DG + LEEL +L+ G T +++E L++ + +DE
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 62
Query: 59 FLFFCDSI 66
FL F +
Sbjct: 63 FLEFMKGV 70
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Query: 96 EEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
EE+SDL F +FD N DG+I EEL+ +L G
Sbjct: 5 EELSDL---FRMFDKNADGYIDLEELKIMLQATG 35
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 34.3 bits (77), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LCFDE 58
+ +L F D+N DG + +EEL +L G H E++E L++ + FDE
Sbjct: 8 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
Query: 59 FLFFCDSI 66
FL + +
Sbjct: 68 FLKMMEGV 75
Score = 30.0 bits (66), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+L F +FD N DGFI EEL +L G
Sbjct: 11 ELANCFRIFDKNADGFIDIEELGEILRATG 40
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 29/125 (23%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK--PSLCFDEFL-FFCD 64
+L+ F +D++ DG + +E+L + +G +EL A++++ L F FL F +
Sbjct: 17 ELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAFLTLFGE 76
Query: 65 SIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSV 124
+ SG + L AFS+FD +G GFI + L+ +
Sbjct: 77 KV--------------------------SGTDPEDALRNAFSMFDEDGQGFIPEDYLKDL 110
Query: 125 LARLG 129
L +G
Sbjct: 111 LENMG 115
Score = 28.9 bits (63), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 23/33 (69%)
Query: 97 EISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
++ +L +AF++ D + DGFI E+L+ + + LG
Sbjct: 14 QMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLG 46
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 9 LQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLF 61
L+ F D +G G + + L +LE +G +F+ EE++ + + L +F +
Sbjct: 87 LRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLKNKQFNY 139
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 98 ISDLYKAFSVFDVNGDGFITSEELQSVLARLG--LWDEE 134
+D +AF FD G GFI+ EL+ VL+ LG L DEE
Sbjct: 83 FADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEE 121
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALV 49
T D F+ DR G G +S EL VL +G + EE++ ++
Sbjct: 82 TFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEII 126
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 99 SDLYKAFSVFDVNGDGFITSEELQSVLARLG--LWDEE 134
+D +AF FD G GFI+ EL+ VL+ LG L DEE
Sbjct: 85 ADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEE 122
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALV 49
T D F+ DR G G +S EL VL +G + EE++ ++
Sbjct: 83 TYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEII 127
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 33.9 bits (76), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 99 SDLYKAFSVFDVNGDGFITSEELQSVLARLG--LWDEE 134
+D +AF FD G GFI+ EL+ VL+ LG L DEE
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEE 121
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALV 49
T D F+ DR G G +S EL VL +G + EE++ ++
Sbjct: 82 TYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEII 126
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 10 QRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVE 50
+R+FEK D+N DG +SL+E V +FT E++ E
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFE 44
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLG 129
++ +AF VFD +G+G+I++ EL+ V+ LG
Sbjct: 39 EIREAFRVFDKDGNGYISAAELRHVMTNLG 68
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 33.5 bits (75), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
+ + F+ D +G G +S +EL V+ +G + T EEL+A++E+ ++ F+EFL
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E I++ AF +FD +G G I+++EL +V+ LG
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG 50
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 33.5 bits (75), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Query: 2 APLTANDLQRIFEKLDRNGDGLVSLEEL 29
AP A ++R FEK+DRN DG+V++EE
Sbjct: 54 AP--AEHVERFFEKMDRNQDGVVTIEEF 79
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 20/25 (80%)
Query: 104 AFSVFDVNGDGFITSEELQSVLARL 128
AF+++D+N DG+IT EE+ +++ +
Sbjct: 14 AFNLYDINKDGYITKEEMLAIMKSI 38
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 33.1 bits (74), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 9 LQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LCFDEFLFF 62
L +F D+N DG + L+EL +L+ G T +++E L++ + +DEFL F
Sbjct: 8 LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 67
Query: 63 CDSI 66
+
Sbjct: 68 MKGV 71
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Query: 96 EEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
EE+SDL F +FD N DG+I +EL+ +L G
Sbjct: 6 EELSDL---FRMFDKNADGYIDLDELKIMLQATG 36
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 33.1 bits (74), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 98 ISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+D +AF FD G GFI+ EL+ VL LG
Sbjct: 83 FADYMEAFKTFDREGQGFISGAELRHVLTALG 114
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVE 50
T D F+ DR G G +S EL VL +G + E+++ +++
Sbjct: 82 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIK 127
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 33.1 bits (74), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 98 ISDLYKAFSVFDVNGDGFITSEELQSVLARLG--LWDEEKQPRLQKHDLR 145
+D +AF FD G GFI+ EL+ VL LG L DE+ ++ DL+
Sbjct: 80 FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQ 129
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVE 50
T D F+ DR G G +S EL VL +G + E+++ +++
Sbjct: 79 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIK 124
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 33.1 bits (74), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 98 ISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+D +AF FD G GFI+ EL+ VL LG
Sbjct: 83 FADYMEAFKTFDREGQGFISGAELRHVLTALG 114
Score = 28.9 bits (63), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVE 50
T D F+ DR G G +S EL VL +G + E+++ +++
Sbjct: 82 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIK 127
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution
Structures Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution
Structures Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution
Structures Of The Ef Hand Parvalbumin (alpha Component
From Pike Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution
Structures Of The Ef Hand Parvalbumin (alpha Component
From Pike Muscle)
Length = 110
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 24/38 (63%)
Query: 1 MAPLTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGV 38
+ ++AND++++F+ +D + G + EEL +VL+
Sbjct: 36 LKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAA 73
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Query: 99 SDLYKAFSVFDVNGDGFITSEELQSVLARLG-----LWDEEKQPRLQKHD 143
+D+ K F D + GFI EEL+ VL L D E + L+ D
Sbjct: 42 NDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAAD 91
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 98 ISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+D +AF FD G GFI+ EL+ VL LG
Sbjct: 83 FADYMEAFKTFDREGQGFISGAELRHVLTALG 114
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVE 50
T D F+ DR G G +S EL VL +G + E+++ +++
Sbjct: 82 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIK 127
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 33/146 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS--------LCFDEF 59
+ + FE DR GDG + + V+ +G + T E+ ++ P + F+ F
Sbjct: 11 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETF 70
Query: 60 LFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSE 119
L ++ + G D + F VFD G+G +
Sbjct: 71 LPMLQAVAK-----------------------NRGQGTYEDYLEGFRVFDKEGNGKVMGA 107
Query: 120 ELQSVLARLG--LWDEEKQPRLQKHD 143
EL+ VL LG + +EE + L H+
Sbjct: 108 ELRHVLTTLGEKMTEEEVETVLAGHE 133
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALV 49
T D F D+ G+G V EL VL +G T EE+E ++
Sbjct: 85 TYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVL 129
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
+ + F+ D +G G +S +EL V+ +G + T EEL+A++E+ ++ F+EFL
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 68
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E I++ AF +FD +G G I+++EL +V+ LG
Sbjct: 5 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG 39
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 98 ISDLYKAFSVFDVNGDGFITSEELQSVLARLG--LWDEEKQPRLQKHDLR 145
+D +AF FD G GFI+ EL+ VL LG L DE+ ++ DL+
Sbjct: 81 FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQ 130
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVE 50
T D F+ DR G G +S EL VL +G + E+++ +++
Sbjct: 80 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIK 125
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 33.1 bits (74), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 98 ISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+D +AF FD G GFI+ EL+ VL LG
Sbjct: 80 FADYMEAFKTFDREGQGFISGAELRHVLTALG 111
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVE 50
T D F+ DR G G +S EL VL +G + E+++ +++
Sbjct: 79 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIK 124
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 32.7 bits (73), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 6 ANDLQRIFEKLDRNGDGLVSLEELNWVLERI 36
+ L +FE+LD+NGDG VS EE ++++I
Sbjct: 43 GSTLDELFEELDKNGDGEVSFEEFQVLVKKI 73
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 32.7 bits (73), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 6 ANDLQRIFEKLDRNGDGLVSLEELNWVLERI 36
+ L +FE+LD+NGDG VS EE ++++I
Sbjct: 44 GSTLDELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 32.7 bits (73), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 9 LQRIFEKLDRNGDGLVSLEELNWVLERI 36
L +FE+LD+NGDG VS EE ++++I
Sbjct: 50 LDELFEELDKNGDGEVSFEEFQVLVKKI 77
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The
Structure Of Other Calcium-Binding Proteins
Length = 75
Score = 32.7 bits (73), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 9 LQRIFEKLDRNGDGLVSLEELNWVLERI 36
L +FE+LD+NGDG VS EE ++++I
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKKI 73
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By
X- Ray Crystallography
Length = 76
Score = 32.7 bits (73), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 9 LQRIFEKLDRNGDGLVSLEELNWVLERI 36
L +FE+LD+NGDG VS EE ++++I
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 99 SDLYKAFSVFDVNGDGFITSEELQSVLARLGLW 131
++L AF D NGDG++T+ ELQ+ + L +
Sbjct: 7 AELEAAFKKLDANGDGYVTALELQTFMVTLDAY 39
Score = 28.9 bits (63), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 1 MAPLTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEE 44
MA +L+ F+KLD NGDG V+ EL + + + L +
Sbjct: 1 MACKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSK 44
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 9 LQRIFEKLDRNGDGLVSLEELNWVLERI 36
L +FE+LD+NGDG VS EE ++++I
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKKI 73
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLG--LWDEEKQPRLQKHDL 144
++ +AF V D +G+G+I++ EL+ V+ LG L DEE +++ D+
Sbjct: 30 EIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 76
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 27/47 (57%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSL 54
+++ F D++G+G +S EL V+ +G T EE++ ++ + +
Sbjct: 30 EIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 76
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 32.7 bits (73), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 9 LQRIFEKLDRNGDGLVSLEELNWVLERI 36
L +FE+LD+NGDG VS EE ++++I
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 32.7 bits (73), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 2 APLTANDLQRIFEKLDRNGDGLVSLEELNWVLERI 36
P T +DL F++LD+NGDG VS EE ++++I
Sbjct: 45 GPRTLDDL---FQELDKNGDGEVSFEEFQVLVKKI 76
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 32.7 bits (73), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 9 LQRIFEKLDRNGDGLVSLEELNWVLERI 36
L +FE+LD+NGDG VS EE ++++I
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKKI 73
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 32.7 bits (73), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 9 LQRIFEKLDRNGDGLVSLEELNWVLERI 36
L +FE+LD+NGDG VS EE ++++I
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 32.3 bits (72), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 9 LQRIFEKLDRNGDGLVSLEELNWVLERI 36
L +FE+LD+NGDG VS EE ++++I
Sbjct: 45 LDELFEELDKNGDGEVSFEEFQVLVKKI 72
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 32.3 bits (72), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 97 EISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+I + +AF++ D N DGFI E+L +LA +G
Sbjct: 5 QIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMG 37
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 31/132 (23%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALV-EKPS-LCFDEFL-FFCD 64
+ + F +D+N DG + E+L+ +L +G + T E LE ++ E P + F FL F +
Sbjct: 8 EFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAPGPINFTMFLTMFGE 67
Query: 65 SIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSV 124
+ +G + + AF+ FD GFI + L+ +
Sbjct: 68 KL--------------------------NGTDPEDVIRNAFACFDEEASGFIHEDHLREL 101
Query: 125 LARLG--LWDEE 134
L +G DEE
Sbjct: 102 LTTMGDRFTDEE 113
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 32.3 bits (72), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 33/146 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKP--------SLCFDEF 59
+ + F+ DR GDG + + V+ +G + T E+ ++ P +L F++F
Sbjct: 8 EFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQF 67
Query: 60 LFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSE 119
L +I + D G E D + VFD G+G +
Sbjct: 68 LPMMQTIAK---------------------NKDQGCFE--DYVEGLRVFDKEGNGTVMGA 104
Query: 120 ELQSVLARLG--LWDEEKQPRLQKHD 143
E++ VL LG + +EE + + H+
Sbjct: 105 EIRHVLVTLGEKMTEEEVEQLVAGHE 130
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E+ ++ +AF +FD GDG I + V+ LG
Sbjct: 3 EEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALG 37
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal
Domain Of Akazara Scallop Troponin C In Complex With A
Troponin I Fragment
Length = 74
Score = 32.3 bits (72), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 1 MAPLTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALV 49
M L +L+ F LD+ G++ ++ L W+L+ +G T +E+E ++
Sbjct: 1 MEDLDERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMI 49
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 32.3 bits (72), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLG---LWDEEKQPRLQKHD 143
++ +AF VFD NGDG I +E + ++ ++G L D E + +++ D
Sbjct: 9 EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEAD 55
Score = 29.6 bits (65), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 11 RIFEKLDRNGDGLVSLEELNWVLERIG 37
R F+ D NGDG++ +E ++++++G
Sbjct: 12 RAFKVFDANGDGVIDFDEFKFIMQKVG 38
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 15/128 (11%)
Query: 1 MAPLTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFL 60
+ P +L+ F + D++ DG ++ +L + +G T EL L ++ ++ +
Sbjct: 19 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 78
Query: 61 FFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEE 120
F D + D G +E+ D AF FD NGDG I++ E
Sbjct: 79 DFDDFV------------ELMGPKLLAETADMIGVKELRD---AFREFDTNGDGEISTSE 123
Query: 121 LQSVLARL 128
L+ + +L
Sbjct: 124 LREAMRKL 131
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 96 EEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEE 134
EEI +L +AF FD + DG+I +L + + +G E
Sbjct: 22 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTE 60
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 33/146 (22%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKP--------SLCFDEF 59
+ + F+ DR GDG + + V+ +G + T E+ ++ P +L F++F
Sbjct: 10 EFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQF 69
Query: 60 LFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSE 119
L +I + D G E D + VFD G+G +
Sbjct: 70 LPMMQTIAK---------------------NKDQGCFE--DYVEGLRVFDKEGNGTVMGA 106
Query: 120 ELQSVLARLG--LWDEEKQPRLQKHD 143
E++ VL LG + +EE + + H+
Sbjct: 107 EIRHVLVTLGEKMTEEEVEQLVAGHE 132
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 92 DSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
D +E+ ++ +AF +FD GDG I + V+ LG
Sbjct: 2 DFSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALG 39
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 29/48 (60%)
Query: 4 LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK 51
L+ ++R F+ D++G G +S +EL + + +EELE+++E+
Sbjct: 414 LSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQ 461
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 15/128 (11%)
Query: 1 MAPLTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFL 60
+ P +L+ F + D++ DG ++ +L + +G T EL L ++ ++ +
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 61 FFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEE 120
F D + D G +E+ D AF FD NGDG I++ E
Sbjct: 65 DFDDFV------------ELMGPKLLAETADMIGVKELRD---AFREFDTNGDGEISTSE 109
Query: 121 LQSVLARL 128
L+ + +L
Sbjct: 110 LREAMRKL 117
Score = 29.6 bits (65), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 96 EEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQ 136
EEI +L +AF FD + DG+I +L + + +G E +
Sbjct: 8 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEME 48
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 97 EISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
EI D +AF+V D N DG I ++L+ A +G
Sbjct: 23 EIEDFKEAFTVIDQNADGIIDKDDLRETFAAMG 55
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIG-VHFTLEELEALVEKPS 53
D + F +D+N DG++ ++L +G ++ EEL+A++++ S
Sbjct: 26 DFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEAS 72
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 97 EISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
EI D +AF+V D N DG I ++L+ A +G
Sbjct: 5 EIEDFKEAFTVIDQNADGIIDKDDLRETFAAMG 37
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIG-VHFTLEELEALVEKPS 53
D + F +D+N DG++ ++L +G ++ EEL+A++++ S
Sbjct: 8 DFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEAS 54
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
+ + F+ D +G G +S + L V+ +G + T EEL+A++E+ ++ F+EFL
Sbjct: 21 EFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E I++ AF +FD +G G I+++ L +V+ LG
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLG 50
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 101 LYKAFSVFDVNGDGFITSEELQSVL 125
+Y AF VFDV+ DG IT+ EL VL
Sbjct: 127 IYCAFRVFDVDNDGEITTAELAHVL 151
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 98 ISDLYKAFSVFDVNGDGFITSEELQSVLARL 128
+ +L AF FD NGDG I++ EL+ + +L
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKL 36
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 33/145 (22%)
Query: 7 NDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
+++ F+ D +G G + +EL + +G EE++ ++ + ++ F+EFL
Sbjct: 28 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFL 87
Query: 61 FFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEE 120
+ + DS +E + KAF +FD + G IT ++
Sbjct: 88 TMMTAKMGER---------------------DSREE----ILKAFRLFDDDNSGTITIKD 122
Query: 121 LQSVLARLG--LWDEEKQPRLQKHD 143
L+ V LG L +EE Q + + D
Sbjct: 123 LRRVAKELGENLTEEELQEMIAEAD 147
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQPRLQK 141
+E+ ++ +AF +FD +G G I ++EL+ + LG E K+ ++K
Sbjct: 24 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGF--EPKKEEIKK 68
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+E I++ AF +FD +G G I+++EL +V+ LG
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG 50
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALV 49
+ + F+ D +G G +S +EL V+ +G + T EL+A++
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAII 62
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Query: 101 LYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQPRLQKHDL 144
+Y AF VFDV+ DG IT+ EL + L++ K+ + + D+
Sbjct: 124 IYCAFRVFDVDNDGEITTAELAHI-----LYNGNKKGNITQRDV 162
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 93 SGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGL 130
S D ++ L F V D +G G+IT E+L+ L + GL
Sbjct: 46 SNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGL 83
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+L AF +FD N DG+I EEL +L G
Sbjct: 6 ELANAFRIFDKNADGYIDIEELGEILRATG 35
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIG 37
+L F D+N DG + +EEL +L G
Sbjct: 6 ELANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|1J7Q|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
pdb|1J7R|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
Length = 86
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/75 (21%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 1 MAPLTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVE--------KP 52
+ P ++ +IF+ DRN + + + + +L ++G +T E EA+++ K
Sbjct: 8 LGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKK 67
Query: 53 SLCFDEFLFFCDSII 67
++ +E+L C +
Sbjct: 68 NIGPEEWLTLCSKWV 82
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 27/41 (65%)
Query: 96 EEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQ 136
++I ++ +AF++ D N DGFI +L+ + + LG ++K+
Sbjct: 16 KQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKE 56
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 104 AFSVFDVNGDGFITSEELQSVLARL 128
AF+++D+N DG+IT EE+ ++ +
Sbjct: 143 AFNLYDINKDGYITKEEMLDIMKAI 167
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 15/128 (11%)
Query: 1 MAPLTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFL 60
+ P +L+ F + D++ DG ++ +L + +G T EL L ++ ++ +
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 61 FFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEE 120
F D + D G +E+ D AF FD NGDG I++ E
Sbjct: 65 DFDDFV------------ELMGPKLLAETADMIGVKELRD---AFREFDTNGDGEISTSE 109
Query: 121 LQSVLARL 128
L+ + L
Sbjct: 110 LREAMRAL 117
Score = 29.6 bits (65), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 96 EEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQ 136
EEI +L +AF FD + DG+I +L + + +G E +
Sbjct: 8 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEME 48
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 30.0 bits (66), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 96 EEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEE 134
EEI +L +AF FD + DG+I +L + + +G E
Sbjct: 7 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTE 45
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Query: 2 APLTANDLQRIFEKLDRNGDGLVSLEEL 29
APL ++R F+K+DRN DG+V+++E
Sbjct: 210 APL--EHVERFFQKMDRNQDGVVTIDEF 235
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 104 AFSVFDVNGDGFITSEELQSVLARL 128
AF+++D+N DG IT EE+ +++ +
Sbjct: 170 AFNLYDINKDGCITKEEMLAIMKSI 194
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 97 EISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+I D +AF+V D N DG I ++L+ A +G
Sbjct: 10 QIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMG 42
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIG-VHFTLEELEALVEKPS 53
D + F +D+N DG++ ++L +G ++ EEL+A++++ S
Sbjct: 13 DFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEAS 59
>pdb|1D1O|A Chain A, Cooperativity In Ef-Hand Ca2+-Binding Proteins: Evidence
Of Site-Site Communication From Binding-Induced Changes
In Structure And Dynamics Of N56a Calbindin D9k
Length = 75
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 9 LQRIFEKLDRNGDGLVSLEELNWVLERI 36
L +FE+LD+ GDG VS EE ++++I
Sbjct: 46 LDELFEELDKAGDGEVSFEEFQVLVKKI 73
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 29.6 bits (65), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLG 129
+ +AF FD G G I+S E+++VL LG
Sbjct: 86 EFMEAFKTFDREGQGLISSAEIRNVLKMLG 115
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 11/60 (18%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFFCD 64
A++ F+ DR G GL+S E+ VL+ +G T ++ C D F FCD
Sbjct: 83 AADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQ----------CNDIFT-FCD 131
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 96 EEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
EE + +AF +FD + D +T+EEL +V+ LG
Sbjct: 11 EEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALG 44
>pdb|2YCD|A Chain A, Structure Of A Novel Glutathione Transferase From
Agrobacterium Tumefaciens
Length = 230
Score = 29.3 bits (64), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 4 LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEEL--EALVEKPSLCFDEF 59
+ N +FE+ G GL + W LE +G + + L EA+ E L + F
Sbjct: 13 MKPNPTITVFERSPDGGRGLARDMPVRWALEEVGQPYHVRRLSFEAMKEASHLAYQPF 70
>pdb|3LQ7|A Chain A, Crystal Structure Of Glutathione S-Transferase From
Agrobacterium Tumefaciens Str. C58
pdb|3LQ7|B Chain B, Crystal Structure Of Glutathione S-Transferase From
Agrobacterium Tumefaciens Str. C58
pdb|3LQ7|C Chain C, Crystal Structure Of Glutathione S-Transferase From
Agrobacterium Tumefaciens Str. C58
Length = 240
Score = 29.3 bits (64), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 4 LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEEL--EALVEKPSLCFDEF 59
+ N +FE+ G GL + W LE +G + + L EA+ E L + F
Sbjct: 15 MKPNPTITVFERSPDGGRGLARDMPVRWALEEVGQPYHVRRLSFEAMKEASHLAYQPF 72
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQPRLQK 141
+E+ ++ +AF +FD +G G I ++EL+ + LG E K+ ++K
Sbjct: 4 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGF--EPKKEEIKK 48
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 33/145 (22%)
Query: 7 NDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVE------KPSLCFDEFL 60
+++ F+ D +G G + +EL + +G EE++ ++ ++ F+EFL
Sbjct: 8 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFL 67
Query: 61 FFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEE 120
+ + DS +E + KAF +FD + G I+ +
Sbjct: 68 QMMTAKMGER---------------------DSREE----IMKAFRLFDDDETGKISFKN 102
Query: 121 LQSVLARLG--LWDEEKQPRLQKHD 143
L+ V LG + DEE Q + + D
Sbjct: 103 LKRVAKELGENMTDEELQEMIDEAD 127
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 23/35 (65%)
Query: 4 LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGV 38
+T +LQ + ++ DR+GDG V+ EE ++++ +
Sbjct: 114 MTDEELQEMIDEADRDGDGEVNEEEFFRIMKKTSL 148
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQPRLQK 141
+E+ ++ +AF +FD +G G I ++EL+ + LG E K+ ++K
Sbjct: 26 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGF--EPKKEEIKK 70
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 7 NDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
D Q +F DR+ G++ EL L G + + + L+ K + FD+F+
Sbjct: 74 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 133
Query: 61 FFC 63
C
Sbjct: 134 QGC 136
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 13 FEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFFCD 64
+ + D NG+G + + L +LE++GV T EL+ L+ + S +E + D
Sbjct: 54 YMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSD 105
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 93 SGDEEISDLYKAFSV----FDVNGDGFITSEELQSVLARLGL 130
S DE++ +AF V FD+NG+G I L+ +L +LG+
Sbjct: 38 SNDEDLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGV 79
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 7 NDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
D Q +F DR+ G++ EL L G + + + L+ K + FD+F+
Sbjct: 71 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 130
Query: 61 FFC 63
C
Sbjct: 131 QGC 133
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 7 NDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
D Q +F DR+ G++ EL L G + + + L+ K + FD+F+
Sbjct: 92 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 151
Query: 61 FFC 63
C
Sbjct: 152 QGC 154
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 7 NDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
D Q +F DR+ G++ EL L G + + + L+ K + FD+F+
Sbjct: 70 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 129
Query: 61 FFC 63
C
Sbjct: 130 QGC 132
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLF 61
D Q +F DR+ G++ EL L G + + + L+ K + FD+F+
Sbjct: 94 DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ 153
Query: 62 FC 63
C
Sbjct: 154 GC 155
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 7 NDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
D Q +F DR+ G++ EL L G + + + L+ K + FD+F+
Sbjct: 74 TDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 133
Query: 61 FFC 63
C
Sbjct: 134 QGC 136
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 22/30 (73%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLE 34
+A+D++++F LD++ DG + +EL +L+
Sbjct: 39 SADDVKKVFHILDKDKDGFIDEDELGSILK 68
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVL 125
D+ K F + D + DGFI +EL S+L
Sbjct: 42 DVKKVFHILDKDKDGFIDEDELGSIL 67
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 25/39 (64%)
Query: 98 ISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQ 136
+ ++ +AF++ D N DGFI +L+ + + LG ++K+
Sbjct: 22 MQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKE 60
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Query: 21 DGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
DG +S +EL V+ +G + T EEL+ ++++ ++ FDEFL
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 25/39 (64%)
Query: 98 ISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQ 136
+ ++ +AF++ D N DGFI +L+ + + LG ++K+
Sbjct: 22 MQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKE 60
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Query: 3 PLTANDLQR-----IFEKLDRNGDGLVSLEEL 29
P+ A D R F+K+D+N DG+V+L+E
Sbjct: 128 PVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEF 159
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 8/25 (32%), Positives = 17/25 (68%)
Query: 104 AFSVFDVNGDGFITSEELQSVLARL 128
F+++D+N DG+I EE+ ++ +
Sbjct: 94 TFNLYDINKDGYINKEEMMDIVKAI 118
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 20/25 (80%)
Query: 104 AFSVFDVNGDGFITSEELQSVLARL 128
AF ++D+N DG+IT +E+ +++A +
Sbjct: 104 AFELYDLNHDGYITFDEMLTIVASV 128
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Query: 21 DGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
DG +S +EL V+ +G + T EEL+ ++++ ++ FDEFL
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Query: 21 DGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
DG +S +EL V+ +G + T EEL+ ++++ ++ FDEFL
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 13/118 (11%)
Query: 12 IFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFFCDSIISXXX 71
IF D+ G G ++ + L L IG + T + ++ ++ S D D I
Sbjct: 9 IFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIE 68
Query: 72 XXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
D + + D KAF VFD G ++ +L+ +L LG
Sbjct: 69 VNEKEL-------------DATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLG 113
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 52/140 (37%), Gaps = 39/140 (27%)
Query: 9 LQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLFF 62
L R F +LDR+G + +E L ++G+ E E + K +L +EFL
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRA 98
Query: 63 CDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQ 122
+S + AF+ D +GDG +T ++L+
Sbjct: 99 LRPPMSQAREAV--------------------------IAAAFAKLDRSGDGVVTVDDLR 132
Query: 123 SVLA-------RLGLWDEEK 135
V + R G W E++
Sbjct: 133 GVYSGRAHPKVRSGEWTEDE 152
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Query: 21 DGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
DG +S +EL V+ +G + T EEL+ ++++ ++ FDEFL
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 24/38 (63%)
Query: 13 FEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVE 50
F+ D++ G++ + EL +VL +G + EE++ L++
Sbjct: 82 FQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLK 119
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 91 DDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
D GD E + K F VFD + G I EL+ VL LG
Sbjct: 70 DMPGDPE--EFVKGFQVFDKDATGMIGVGELRYVLTSLG 106
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 4 LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVH 39
LT +LQ + ++ DR+GDG VS +E ++++ ++
Sbjct: 54 LTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY 89
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
Length = 76
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 7 NDLQRIFEKLDRNGDGLVSLEELNWVLERI 36
+ L + E++D+NGDG VS EE ++++I
Sbjct: 45 STLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined
With A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 22/30 (73%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLE 34
+A+D++++F LD++ G + +EL ++L+
Sbjct: 40 SADDVKKVFHMLDKDKSGFIEEDELGFILK 69
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 33/145 (22%)
Query: 7 NDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
+++ F+ D +G G + ++EL + +G EE++ ++ + + F +FL
Sbjct: 6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL 65
Query: 61 FFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEE 120
+S + D+ +E + KAF +FD + G I+ +
Sbjct: 66 TVMTQKMS---------------------EKDTKEE----ILKAFKLFDDDETGKISFKN 100
Query: 121 LQSVLARLG--LWDEEKQPRLQKHD 143
L+ V LG L DEE Q + + D
Sbjct: 101 LKRVAKELGENLTDEELQEMIDEAD 125
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQPRLQK 141
+E+ ++ +AF +FD +G G I +EL+ + LG E K+ ++K
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGF--EPKKEEIKK 46
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 4 LTANDLQRIFEKLDRNGDGLVSLEELNWVLER 35
LT +LQ + ++ DR+GDG VS +E ++++
Sbjct: 112 LTDEELQEMIDEADRDGDGEVSEQEFLRIMKK 143
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 31/128 (24%)
Query: 10 QRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKP-------SLCFDEFLFF 62
+ +F+++D NGDG VS EE+ + + E+L L+ K + +EF F
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRA-IKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 63 CDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQ 122
SI D D++I L + + DV+GDG +T EE+
Sbjct: 62 YGSIQGQ----------------------DLSDDKIG-LKVLYKLMDVDGDGKLTKEEVT 98
Query: 123 SVLARLGL 130
S + G+
Sbjct: 99 SFFKKHGI 106
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 31/128 (24%)
Query: 10 QRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKP-------SLCFDEFLFF 62
+ +F+++D NGDG VS EE+ + + E+L L+ K + +EF F
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRA-IKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 63 CDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQ 122
SI D D++I L + + DV+GDG +T EE+
Sbjct: 62 YGSIQGQ----------------------DLSDDKIG-LKVLYKLMDVDGDGKLTKEEVT 98
Query: 123 SVLARLGL 130
S + G+
Sbjct: 99 SFFKKHGI 106
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 22/29 (75%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARL 128
+L +AF ++D G+G+I+++ ++ +LA L
Sbjct: 4 ELREAFRLYDKEGNGYISTDVMREILAEL 32
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 96 EEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
EEI L + F + D + G IT +EL+ L R+G
Sbjct: 20 EEIGGLKELFKMIDTDNSGTITFDELKDGLKRVG 53
Score = 25.8 bits (55), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 11/46 (23%), Positives = 26/46 (56%)
Query: 9 LQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSL 54
L+ +F+ +D + G ++ +EL L+R+G E++ L++ +
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 22/29 (75%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARL 128
+L +AF ++D G+G+I+++ ++ +LA L
Sbjct: 92 ELREAFRLYDKEGNGYISTDVMREILAEL 120
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 27.3 bits (59), Expect = 2.9, Method: Composition-based stats.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 8 DLQRIFEKLDRNGDGLVSLEEL 29
+L IF+KLD+NGDG + +EL
Sbjct: 356 ELTDIFKKLDKNGDGQLDKKEL 377
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 7/44 (15%)
Query: 4 LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEA 47
L+ + L+ F+K D++G+G +S++EL V F L+ LE+
Sbjct: 140 LSKDKLESAFQKFDQDGNGKISVDELASV-------FGLDHLES 176
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 100 DLYKAFSVFDVNGDGFITSEELQSVLARLG--LWDEEKQPRLQKHD 143
++ KAF +FD + G IT ++L+ V LG L +EE Q + + D
Sbjct: 10 EILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEAD 55
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 7/44 (15%)
Query: 4 LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEA 47
L+ + L+ F+K D++G+G +S++EL V F L+ LE+
Sbjct: 423 LSKDKLESAFQKFDQDGNGKISVDELASV-------FGLDHLES 459
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGL 130
+E+ ++ +AF +FD +G G I +EL+ + LG
Sbjct: 27 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGF 62
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 105 FSVFDVNGDGFITSEELQSVLAR 127
F FD++G+G I+ EEL+ + R
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGR 157
Score = 25.8 bits (55), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLG 129
D EI++L F DV+ G ++S+E+ L ++G
Sbjct: 53 DVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIG 87
>pdb|2R7D|A Chain A, Crystal Structure Of Ribonuclease Ii Family Protein From
Deinococcus Radiodurans, Triclinic Crystal Form.
Northeast Structural Genomics Target Drr63
pdb|2R7D|B Chain B, Crystal Structure Of Ribonuclease Ii Family Protein From
Deinococcus Radiodurans, Triclinic Crystal Form.
Northeast Structural Genomics Target Drr63
pdb|2R7D|C Chain C, Crystal Structure Of Ribonuclease Ii Family Protein From
Deinococcus Radiodurans, Triclinic Crystal Form.
Northeast Structural Genomics Target Drr63
pdb|2R7F|A Chain A, Crystal Structure Of Ribonuclease Ii Family Protein From
Deinococcus Radiodurans, Hexagonal Crystal Form.
Northeast Structural Genomics Target Drr63
Length = 469
Score = 27.3 bits (59), Expect = 3.4, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 117 TSEELQSVLARLGLWDEEKQP 137
T E ++L RLG+WDE + P
Sbjct: 36 TPEAAHALLLRLGVWDEARTP 56
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 8/25 (32%), Positives = 17/25 (68%)
Query: 104 AFSVFDVNGDGFITSEELQSVLARL 128
F+++D+N DG+I EE+ ++ +
Sbjct: 130 TFNLYDINKDGYINKEEMMDIVKAI 154
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 9/17 (52%), Positives = 15/17 (88%)
Query: 13 FEKLDRNGDGLVSLEEL 29
F+K+D+N DG+V+L+E
Sbjct: 179 FQKMDKNKDGIVTLDEF 195
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 47/128 (36%), Gaps = 17/128 (13%)
Query: 10 QRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKP-------SLCFDEFLFF 62
+ +F++LD NGDG VS EE+ + E+L L+ K + EF F
Sbjct: 3 EALFKQLDANGDGSVSYEEVKAFVSS-KRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKF 61
Query: 63 CDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSV---------FDVNGD 113
++ D EE++ +K F D NGD
Sbjct: 62 AAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQIMKADANGD 121
Query: 114 GFITSEEL 121
G+IT EE
Sbjct: 122 GYITLEEF 129
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 4 LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGV 38
LT +LQ + ++ DR+GDG VS +E ++++ +
Sbjct: 44 LTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSL 78
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 8/25 (32%), Positives = 17/25 (68%)
Query: 104 AFSVFDVNGDGFITSEELQSVLARL 128
F+++D+N DG+I EE+ ++ +
Sbjct: 97 TFNLYDINKDGYINKEEMMDIVKAI 121
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 9/17 (52%), Positives = 15/17 (88%)
Query: 13 FEKLDRNGDGLVSLEEL 29
F+K+D+N DG+V+L+E
Sbjct: 146 FQKMDKNKDGIVTLDEF 162
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 8/25 (32%), Positives = 17/25 (68%)
Query: 104 AFSVFDVNGDGFITSEELQSVLARL 128
F+++D+N DG+I EE+ ++ +
Sbjct: 94 TFNLYDINKDGYINKEEMMDIVKAI 118
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 9/17 (52%), Positives = 15/17 (88%)
Query: 13 FEKLDRNGDGLVSLEEL 29
F+K+D+N DG+V+L+E
Sbjct: 143 FQKMDKNKDGIVTLDEF 159
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 26.9 bits (58), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 9 LQRIFEKLDRNGDGLVSLEELNWVLERIG-----VHFTLEELEALVEKPSLCFDEFLFFC 63
+ +F KLD N +G +S E+ VL +G ++ L+ L+ + ++ ++ + EF+ C
Sbjct: 41 INELFYKLDTNHNGSLSHREIYTVLASVGIKKWDINRILQALD-INDRGNITYTEFMAGC 99
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 13 FEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFFCD 64
+ + D NG+G + + L +LE++GV T EL+ L+ + S E + D
Sbjct: 57 YMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPD 108
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 93 SGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQPRLQK 141
GD+E L AF ++D++ DG+I++ EL VL ++ + + K +LQ+
Sbjct: 85 KGDKE-QKLRFAFRIYDMDKDGYISNGELFQVL-KMMVGNNLKDTQLQQ 131
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 93 SGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQPRLQK 141
GD+E L AF ++D++ DG+I++ EL VL ++ + + K +LQ+
Sbjct: 71 KGDKE-QKLRFAFRIYDMDKDGYISNGELFQVL-KMMVGNNLKDTQLQQ 117
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 93 SGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQPRLQK 141
GD+E L AF ++D++ DG+I++ EL VL ++ + + K +LQ+
Sbjct: 84 KGDKE-QKLRFAFRIYDMDKDGYISNGELFQVL-KMMVGNNLKDTQLQQ 130
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 98 ISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQ 136
+ ++ +AF++ D N DGFI +L+ + LG ++K+
Sbjct: 1 MQEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKE 39
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 93 SGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQPRLQK 141
GD+E L AF ++D++ DG+I++ EL VL ++ + + K +LQ+
Sbjct: 70 KGDKE-QKLRFAFRIYDMDKDGYISNGELFQVL-KMMVGNNLKDTQLQQ 116
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 3 PLTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFF 62
P + + + D NG+G + + L +LE++GV T EL+ L+ + S E +
Sbjct: 28 PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSY 87
Query: 63 CD 64
D
Sbjct: 88 PD 89
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3
(Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 1 MAPLTANDLQRIFEKLDRNGDGLVSLEELNWVLER 35
M+ +++ L+ IF LD + G + +EL + L+R
Sbjct: 35 MSKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQR 69
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 103 KAFSVFDVNGDGFITSEELQSVLARL 128
KAF ++D +G+G+I EL ++L L
Sbjct: 195 KAFELYDQDGNGYIDENELDALLKDL 220
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 2 APLTAND----LQRIFEKLDRNGDGLVSLEEL 29
+ LT+ D L IF K+D+NGDG + EL
Sbjct: 326 SKLTSQDETKELTAIFHKMDKNGDGQLDRAEL 357
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 2 APLTAND----LQRIFEKLDRNGDGLVSLEEL 29
+ LT+ D L IF K+D+NGDG + EL
Sbjct: 349 SKLTSQDETKELTAIFHKMDKNGDGQLDRAEL 380
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 30/125 (24%)
Query: 8 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALV-EKPS-LCFDEFL-FFCD 64
+ + F+ +D++ DG +S ++ + +G T +EL+++V E P + F FL F D
Sbjct: 58 EFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGPINFTMFLTIFGD 117
Query: 65 SIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSV 124
I +G +E + AF++FD GDG E L+
Sbjct: 118 RI--------------------------AGTDEEDVIVNAFNLFD-EGDGKCKEETLKRS 150
Query: 125 LARLG 129
L G
Sbjct: 151 LTTWG 155
>pdb|1OHZ|B Chain B, Cohesin-Dockerin Complex From The Cellulosome Of
Clostridium Thermocellum
Length = 60
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Query: 109 DVNGDGFITSEEL----QSVLARLGLWDEEK 135
DVNGDG I S +L +SVL + L D+ K
Sbjct: 3 DVNGDGTINSTDLTMLKRSVLRAITLTDDAK 33
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 2 APLTAND----LQRIFEKLDRNGDGLVSLEEL 29
+ LT+ D L IF K+D+NGDG + EL
Sbjct: 350 SKLTSQDETKELTAIFHKMDKNGDGQLDRAEL 381
>pdb|2CCL|B Chain B, The S45a, T46a Mutant Of The Type I Cohesin-Dockerin
Complex From The Cellulosome Of Clostridium Thermocellum
pdb|2CCL|D Chain D, The S45a, T46a Mutant Of The Type I Cohesin-Dockerin
Complex From The Cellulosome Of Clostridium Thermocellum
Length = 63
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 109 DVNGDGFITSEEL----QSVLARLGLWDEEKQ 136
DVNGDG I S +L +SVL + L D+ K
Sbjct: 6 DVNGDGTINSTDLTMLKRSVLRAITLTDDAKA 37
>pdb|3PR4|A Chain A, Dpo4 Y12a Mutant Incorporating Dadp Opposite Template Dt
pdb|3PR5|B Chain B, Dpo4 Y12a Mutant Incorporating Adp Opposite Template Dt
Length = 341
Score = 26.2 bits (56), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSV 124
DEE+ L + + DV G G IT+E+L+ +
Sbjct: 168 DEEVKRLIRELDIADVPGIGNITAEKLKKL 197
>pdb|2AGO|A Chain A, Fidelity Of Dpo4: Effect Of Metal Ions, Nucleotide
Selection And Pyrophosphorolysis
pdb|2AGP|A Chain A, Fidelity Of Dpo4: Effect Of Metal Ions, Nucleotide
Selection And Pyrophosphorolysis
pdb|2AGP|B Chain B, Fidelity Of Dpo4: Effect Of Metal Ions, Nucleotide
Selection And Pyrophosphorolysis
pdb|2AGQ|A Chain A, Fidelity Of Dpo4: Effect Of Metal Ions, Nucleotide
Selection And Pyrophosphorolysis
pdb|3T5H|A Chain A, Ternary Complex Of Hne Adduct Modified Dna (5'-Cxg-3' Vs
13-Mer) With Dpo4 And Incoming Ddgt
pdb|3T5J|A Chain A, Ternary Complex Of Hne Adduct Modified Dna (5'-Txg-3' Vs
13-Mer) With Dpo4 And Incoming Ddtp
pdb|3T5K|A Chain A, Ternary Complex Of Hne Adduct Modified Dna (5'-Txg-3' Vs
14-Mer) With Dpo4 And Incoming Ddtp
pdb|3T5L|A Chain A, Ternary Complex Of Hne Adduct Modified Dna (5'-Cxg-3' Vs
14-Mer) With Dpo4 And Incoming Ddgt
Length = 341
Score = 26.2 bits (56), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSV 124
DEE+ L + + DV G G IT+E+L+ +
Sbjct: 168 DEEVKRLIRELDIADVPGIGNITAEKLKKL 197
>pdb|3V6K|A Chain A, Replication Of N2,3-Ethenoguanine By Dna Polymerases
pdb|3V6K|J Chain J, Replication Of N2,3-Ethenoguanine By Dna Polymerases
Length = 347
Score = 26.2 bits (56), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSV 124
DEE+ L + + DV G G IT+E+L+ +
Sbjct: 173 DEEVKRLIRELDIADVPGIGNITAEKLKKL 202
>pdb|3V6H|A Chain A, Replication Of N2,3-Ethenoguanine By Dna Polymerases
pdb|3V6H|B Chain B, Replication Of N2,3-Ethenoguanine By Dna Polymerases
pdb|3V6J|A Chain A, Replication Of N2,3-Ethenoguanine By Dna Polymerases
pdb|3V6J|J Chain J, Replication Of N2,3-Ethenoguanine By Dna Polymerases
Length = 348
Score = 26.2 bits (56), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSV 124
DEE+ L + + DV G G IT+E+L+ +
Sbjct: 174 DEEVKRLIRELDIADVPGIGNITAEKLKKL 203
>pdb|3PVX|A Chain A, Binary Complex Of Aflatoxin B1 Adduct Modified Dna
(Afb1-Fapy) With Dna Polymerase Iv
pdb|3PW0|A Chain A, Ternary Complex Of Aflatoxin B1 Adduct Modified Dna
(Afb1-Fapy) With Dna Polymerase Iv And Incoming Datp
pdb|3PW2|A Chain A, Ternary Complex Of Aflatoxin B1 Adduct Modified Dna
(Afb1-Fapy) With Dna Polymerase Iv And Incoming Dttp
pdb|3PW4|A Chain A, Ternary Complex Of Aflatoxin B1 Adduct Modified Dna
(Afb1-N7-Gua) With Dna Polymerase Iv And Incoming Datp
pdb|3PW5|A Chain A, Ternary Complex Of Aflatoxin B1 Adduct Modified Dna
(Afb1-N7-Gua) With Dna Polymerase Iv And Incoming Dttp
pdb|3PW7|A Chain A, Ternary Complex Of Aflatoxin B1 Adduct Modified Dna
(Afb1-N7-Gua) With Dna Polymerase Iv And Incoming Dctp
pdb|3PW7|E Chain E, Ternary Complex Of Aflatoxin B1 Adduct Modified Dna
(Afb1-N7-Gua) With Dna Polymerase Iv And Incoming Dctp
Length = 347
Score = 26.2 bits (56), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSV 124
DEE+ L + + DV G G IT+E+L+ +
Sbjct: 174 DEEVKRLIRELDIADVPGIGNITAEKLKKL 203
>pdb|4F4Z|B Chain B, Y-family Dna Polymerase Chimera Dpo4-dpo4-dbh
pdb|4F4Z|A Chain A, Y-family Dna Polymerase Chimera Dpo4-dpo4-dbh
Length = 361
Score = 26.2 bits (56), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSV 124
DEE+ L + + DV G G IT+E+L+ +
Sbjct: 168 DEEVKRLIRELDIADVPGIGNITAEKLKKL 197
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 26.2 bits (56), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 12 IFEKLDRNGDGLVSLEEL 29
+F+K+D NGDG +SLEE
Sbjct: 136 VFDKIDINGDGELSLEEF 153
>pdb|3GII|A Chain A, Dpo4 Extension Ternary Complex With Disordered A Opposite
An Oxog In Anti Conformation
pdb|3GIJ|A Chain A, Dpo4 Extension Ternary Complex With Oxog(Syn)-A(Anti) And
Oxog(Anti)- A(Syn) Pairs
pdb|3GIJ|B Chain B, Dpo4 Extension Ternary Complex With Oxog(Syn)-A(Anti) And
Oxog(Anti)- A(Syn) Pairs
pdb|3GIK|A Chain A, Dpo4 Extension Ternary Complex With The Oxog(Anti)-C(Anti)
Pair
pdb|3GIL|A Chain A, Dpo4 Extension Ternary Complex With Oxog(Anti)-T(Anti)
Pair
pdb|3GIL|B Chain B, Dpo4 Extension Ternary Complex With Oxog(Anti)-T(Anti)
Pair
pdb|3GIM|A Chain A, Dpo4 Extension Ternary Complex With Oxog(Anti)-G(Syn) Pair
pdb|3KHG|A Chain A, Dpo4 Extension Ternary Complex With Misinserted A Opposite
The 2- Aminofluorene-Guanine [af]g Lesion
pdb|3KHG|B Chain B, Dpo4 Extension Ternary Complex With Misinserted A Opposite
The 2- Aminofluorene-Guanine [af]g Lesion
pdb|3KHH|A Chain A, Dpo4 Extension Ternary Complex With A C Base Opposite The
2- Aminofluorene-Guanine [af]g Lesion
pdb|3KHH|B Chain B, Dpo4 Extension Ternary Complex With A C Base Opposite The
2- Aminofluorene-Guanine [af]g Lesion
pdb|3KHL|A Chain A, Dpo4 Post-Extension Ternary Complex With Misinserted A
Opposite The 2- Aminofluorene-Guanine [af]g Lesion
pdb|3KHL|B Chain B, Dpo4 Post-Extension Ternary Complex With Misinserted A
Opposite The 2- Aminofluorene-Guanine [af]g Lesion
pdb|3KHR|A Chain A, Dpo4 Post-Extension Ternary Complex With The Correct C
Opposite The 2- Aminofluorene-Guanine [af]g Lesion
pdb|3KHR|B Chain B, Dpo4 Post-Extension Ternary Complex With The Correct C
Opposite The 2- Aminofluorene-Guanine [af]g Lesion
pdb|3RAQ|A Chain A, Dpo4 Extension Ternary Complex With 3'-Terminal Primer C
Base Opposite The 1-Methylguanine (Mg1) Lesion
pdb|3RAQ|B Chain B, Dpo4 Extension Ternary Complex With 3'-Terminal Primer C
Base Opposite The 1-Methylguanine (Mg1) Lesion
pdb|3RAX|A Chain A, Dpo4 Extension Ternary Complex With 3'-Terminal Primer T
Base Opposite The 1-Methylguanine (M1g) Lesion
pdb|3RAX|B Chain B, Dpo4 Extension Ternary Complex With 3'-Terminal Primer T
Base Opposite The 1-Methylguanine (M1g) Lesion
pdb|3RB0|A Chain A, Dpo4 Extension Ternary Complex With 3'-Terminal Primer G
Base Opposite The 1-Methylguanine (M1g) Lesion
pdb|3RB0|B Chain B, Dpo4 Extension Ternary Complex With 3'-Terminal Primer G
Base Opposite The 1-Methylguanine (M1g) Lesion
pdb|3RB3|A Chain A, Dpo4 Extension Ternary Complex With 3'-Terminal Primer A
Base Opposite The 1-Methylguanine (M1g) Lesion
pdb|3RB4|A Chain A, Dpo4 Extension Ternary Complex With 3'-Terminal Primer G
Base Opposite The 3-Methylcytosine (M3c) Lesion
pdb|3RB4|B Chain B, Dpo4 Extension Ternary Complex With 3'-Terminal Primer G
Base Opposite The 3-Methylcytosine (M3c) Lesion
pdb|3RB6|A Chain A, Dpo4 Extension Ternary Complex With 3'-Terminal Primer A
Base Opposite The 3-Methylcytosine (M3c) Lesion
pdb|3RB6|B Chain B, Dpo4 Extension Ternary Complex With 3'-Terminal Primer A
Base Opposite The 3-Methylcytosine (M3c) Lesion
pdb|3RBD|A Chain A, Dpo4 Extension Ternary Complex With 3'-Terminal Primer C
Base Opposite The 3-Methylcytosine (M3c) Lesion
pdb|3RBD|B Chain B, Dpo4 Extension Ternary Complex With 3'-Terminal Primer C
Base Opposite The 3-Methylcytosine (M3c) Lesion
pdb|3RBE|A Chain A, Dpo4 Extension Ternary Complex With 3'-Terminal Primer T
Base Opposite The 3-Methylcytosine (M3c) Lesion
pdb|3RBE|B Chain B, Dpo4 Extension Ternary Complex With 3'-Terminal Primer T
Base Opposite The 3-Methylcytosine (M3c) Lesion
Length = 341
Score = 26.2 bits (56), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSV 124
DEE+ L + + DV G G IT+E+L+ +
Sbjct: 168 DEEVKRLIRELDIADVPGIGNITAEKLKKL 197
>pdb|2IMW|P Chain P, Mechanism Of Template-Independent Nucleotide Incorporation
Catalyzed By A Template-Dependent Dna Polymerase
Length = 348
Score = 26.2 bits (56), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSV 124
DEE+ L + + DV G G IT+E+L+ +
Sbjct: 168 DEEVKRLIRELDIADVPGIGNITAEKLKKL 197
>pdb|2RDI|A Chain A, Snapshots Of A Y-family Dna Polymerase In Replication:
Dpo4 In Apo And Binary/ternary Complex Forms
Length = 342
Score = 26.2 bits (56), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSV 124
DEE+ L + + DV G G IT+E+L+ +
Sbjct: 168 DEEVKRLIRELDIADVPGIGNITAEKLKKL 197
>pdb|1U5T|B Chain B, Structure Of The Escrt-Ii Endosomal Trafficking Complex
Length = 169
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 4 LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEAL-VEKPSLC 55
+T DL ++ K R G GL+S E+ ER H L EL+ + V K LC
Sbjct: 40 ITLVDLYAMYNKSMRIGTGLISPMEMREACERFE-HLGLNELKLVKVNKRILC 91
>pdb|2W9B|A Chain A, Binary Complex Of Dpo4 Bound To N2,N2-Dimethyl-
Deoxyguanosine Modified Dna
pdb|2W9C|A Chain A, Ternary Complex Of Dpo4 Bound To N2,N2-Dimethyl-
Deoxyguanosine Modified Dna With Incoming Dttp
Length = 358
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSV 124
DEE+ L + + DV G G IT+E+L+ +
Sbjct: 174 DEEVKRLIRELDIADVPGIGNITAEKLKKL 203
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 105 FSVFDVNGDGFITSEELQSVLARLGL 130
+ + DV+GDG +T EE+ S + G+
Sbjct: 11 YKLMDVDGDGKLTKEEVTSFFKKHGI 36
>pdb|2BQ3|A Chain A, Dna Adduct Bypass Polymerization By Sulfolobus
Solfataricus Dpo4. Analysis And Crystal Structures Of
Multiple Base- Pair Substitution And Frameshift Products
With The Adduct 1,N2-Ethenoguanine
pdb|2BQR|A Chain A, Dna Adduct Bypass Polymerization By Sulfolobus
Solfataricus Dpo4. Analysis And Crystal Structures Of
Multiple Base- Pair Substitution And Frameshift Products
With The Adduct 1,N2-Ethenoguanine
pdb|2BQU|A Chain A, Dna Adduct Bypass Polymerization By Sulfolobus
Solfataricus Dpo4. Analysis And Crystal Structures Of
Multiple Base- Pair Substitution And Frameshift Products
With The Adduct 1,N2-Ethenoguanine
pdb|2BR0|A Chain A, Dna Adduct Bypass Polymerization By Sulfolobus
Solfataricus Dpo4. Analysis And Crystal Structures Of
Multiple Base- Pair Substitution And Frameshift Products
With The Adduct 1,N2-Ethenoguanine
pdb|2C22|A Chain A, Efficient And High Fidelity Incorporation Of Dctp Opposite
7,8-Dihydro-8-Oxodeoxyguanosine By Sulfolobus
Solfataricus Dna Polymerase Dpo4
pdb|2C28|A Chain A, Efficient And High Fidelity Incorporation Of Dctp Opposite
7,8-Dihydro-8-Oxodeoxyguanosine By Sulfolobus
Solfataricus Dna Polymerase Dpo4
pdb|2C2D|A Chain A, Efficient And High Fidelity Incorporation Of Dctp Opposite
7,8-Dihydro-8-Oxodeoxyguanosine By Sulfolobus
Solfataricus Dna Polymerase Dpo4
pdb|2C2E|A Chain A, Efficient And High Fidelity Incorporation Of Dctp Opposite
7,8-Dihydro-8-Oxodeoxyguanosine By Sulfolobus
Solfataricus Dna Polymerase Dpo4
pdb|2C2R|A Chain A, Efficient And High Fidelity Incorporation Of Dctp Opposite
7,8-Dihydro-8-Oxodeoxyguanosine By Sulfolobus
Solfataricus Dna Polymerase Dpo4
pdb|2J6S|A Chain A, Ternary Complex Of Sulfolobus Solfataricus Dpo4 Dna
Polymerase, O6-Methylguanine Modified Dna, And Datp.
pdb|2J6T|A Chain A, Ternary Complex Of Sulfolobus Solfataricus Dpo4 Dna
Polymerase, O6-Methylguanine Modified Dna, And Datp.
pdb|2J6U|A Chain A, Ternary Complex Of Sulfolobus Solfataricus Dpo4 Dna
Polymerase, O6-methylguanine Modified Dna, And Dgtp.
pdb|2JEF|A Chain A, The Molecular Basis Of Selectivity Of Nucleotide
Triphosphate Incorporation Opposite O6-benzylguanine By
Sulfolobus Solfataricus Dna Polymerase Iv: Steady-state
And Pre-steady-state And X-ray Crystallography Of
Correct And Incorrect Pairing
pdb|2JEG|A Chain A, The Molecular Basis Of Selectivity Of Nucleoside
Triphosphate Incorporation Opposite O6-Benzylguanine By
Sulfolobus Solfataricus Dna Polymerase Iv: Steady-State
And Pre-Steady-State Kinetics And X-Ray Crystallography
Of Correct And Incorrect Pairing
pdb|2JEI|A Chain A, The Molecular Basis Of Selectivity Of Nucleoside
Triphosphate Incorporation Opposite O6-benzylguanine By
Sulfolobus Solfataricus Dna Polymerase Iv: Steady-state
And Pre-steady-state Kinetics And X-ray Crystallography
Of Correct And Incorrect Pairing
pdb|2JEJ|A Chain A, The Molecular Basis Of Selectivity Of Nucleoside
Triphosphate Incorporation Opposite O6-Benzylguanine By
Sulfolobus Solfataricus Dna Polymerase Iv: Steady-State
And Pre-Steady-State Kinetics And X-Ray Crystallography
Of Correct And Incorrect Pairing
pdb|2V9W|A Chain A, Complex Structure Of Sulfolobus Solfataricus Dpo4 And Dna
Duplex Containing A Hydrophobic Thymine Isostere 2,4-
Difluorotoluene Nucleotide In The Template Strand
pdb|2V9W|B Chain B, Complex Structure Of Sulfolobus Solfataricus Dpo4 And Dna
Duplex Containing A Hydrophobic Thymine Isostere 2,4-
Difluorotoluene Nucleotide In The Template Strand
pdb|2VA2|A Chain A, Complex Structure Of Sulfolobus Solfataricus Dpo4 And Dna
Duplex Containing A Hydrophobic Thymine Isostere 2,4-
Difluorotoluene Nucleotide In The Template Strand
pdb|2VA2|B Chain B, Complex Structure Of Sulfolobus Solfataricus Dpo4 And Dna
Duplex Containing A Hydrophobic Thymine Isostere 2,4-
Difluorotoluene Nucleotide In The Template Strand
pdb|2VA3|A Chain A, Complex Structure Of Sulfolobus Solfataricus Dpo4 And Dna
Duplex Containing A Hydrophobic Thymine Isostere 2,4-
Difluorotoluene Nucleotide In The Template Strand
pdb|2W8K|A Chain A, Y-Family Dna Polymerase Dpo4 Bypassing N2-Naphthyl-Guanine
Adduct In Syn Orientation
pdb|2W8L|A Chain A, Y-Family Dna Polymerase Dpo4 Bypassing N2-Naphthyl-Guanine
Adduct In Anti Orientation
pdb|2W9A|A Chain A, Ternary Complex Of Dpo4 Bound To N2,N2-Dimethyl-
Deoxyguanosine Modified Dna With Incoming Dgtp
pdb|2W9B|B Chain B, Binary Complex Of Dpo4 Bound To N2,N2-Dimethyl-
Deoxyguanosine Modified Dna
pdb|2W9C|B Chain B, Ternary Complex Of Dpo4 Bound To N2,N2-Dimethyl-
Deoxyguanosine Modified Dna With Incoming Dttp
pdb|2V4Q|A Chain A, Post-Insertion Complex Of The Y-Family Dna Polymerase Dpo4
With M1dg Containing Template Dna
pdb|2V4R|A Chain A, Non-Productive Complex Of The Y-Family Dna Polymerase Dpo4
With Dgtp Skipping The M1dg Adduct To Pair With The Next
Template Cytosine
pdb|2XC9|A Chain A, Binary Complex Of Sulfolobus Solfataricus Dpo4 Dna
Polymerase And 1,N2-Ethenoguanine Modified Dna,
Magnesium Form
pdb|2XCA|A Chain A, Ternary Complex Of Sulfolobus Solfataricus Dpo4 Dna
Polymerase, 7,8-Dihydro-8-Oxodeoxyguanine Modified Dna
And Dgtp - Magnesium Form
pdb|2XCP|A Chain A, Ternary Complex Of Sulfolobus Solfataricus Dpo4 Dna
Polymerase, 7,8-Dihydro-8-Oxodeoxyguanine Modified Dna
And Dctp - Magnesium Form
pdb|2XCP|B Chain B, Ternary Complex Of Sulfolobus Solfataricus Dpo4 Dna
Polymerase, 7,8-Dihydro-8-Oxodeoxyguanine Modified Dna
And Dctp - Magnesium Form
pdb|4GC6|A Chain A, Crystal Structure Of Dpo4 In Complex With N-mc-damp
Opposite Dt
Length = 358
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSV 124
DEE+ L + + DV G G IT+E+L+ +
Sbjct: 174 DEEVKRLIRELDIADVPGIGNITAEKLKKL 203
>pdb|1JXL|A Chain A, Crystal Structure Of A Y-Family Dna Polymerase In A
Ternary Complex With Dna Substrates And An Incoming
Nucleotide
pdb|1N48|A Chain A, Y-Family Dna Polymerase Dpo4 In Complex With Dna
Containing Abasic Lesion
pdb|1N56|A Chain A, Y-Family Dna Polymerase Dpo4 In Complex With Dna
Containing Abasic Lesion
pdb|1N56|B Chain B, Y-Family Dna Polymerase Dpo4 In Complex With Dna
Containing Abasic Lesion
pdb|1RYR|A Chain A, Replication Of A Cis-Syn Thymine Dimer At Atomic
Resolution
pdb|1RYS|A Chain A, Replication Of A Cis-Syn Thymine Dimer At Atomic
Resolution
pdb|1RYS|B Chain B, Replication Of A Cis-Syn Thymine Dimer At Atomic
Resolution
pdb|1S0M|A Chain A, Crystal Structure Of A Benzo[a]pyrene Diol Epoxide Adduct
In A Ternary Complex With A Dna Polymerase
pdb|1S0M|B Chain B, Crystal Structure Of A Benzo[a]pyrene Diol Epoxide Adduct
In A Ternary Complex With A Dna Polymerase
pdb|1S0N|A Chain A, Snapshots Of Replication Through An Abasic Lesion:
Structural Basis For Base Substitution And Frameshift
pdb|1S0O|A Chain A, Snapshots Of Replication Through An Abasic Lesion:
Structural Basis For Base Substitution And Frameshift
pdb|1S0O|B Chain B, Snapshots Of Replication Through An Abasic Lesion:
Structural Basis For Base Substitution And Frameshift
pdb|1S10|A Chain A, Snapshots Of Replication Through An Abasic Lesion:
Structural Basis For Base Substitution And Frameshift
pdb|1S97|A Chain A, Dpo4 With Gt Mismatch
pdb|1S97|B Chain B, Dpo4 With Gt Mismatch
pdb|1S97|C Chain C, Dpo4 With Gt Mismatch
pdb|1S97|D Chain D, Dpo4 With Gt Mismatch
pdb|1S9F|A Chain A, Dpo With At Matched
pdb|1S9F|B Chain B, Dpo With At Matched
pdb|1S9F|C Chain C, Dpo With At Matched
pdb|1S9F|D Chain D, Dpo With At Matched
pdb|2IA6|A Chain A, Bypass Of Major Benzopyrene-Dg Adduct By Y-Family Dna
Polymerase With Unique Structural Gap
pdb|2IA6|B Chain B, Bypass Of Major Benzopyrene-Dg Adduct By Y-Family Dna
Polymerase With Unique Structural Gap
pdb|2IBK|A Chain A, Bypass Of Major Benzopyrene-Dg Adduct By Y-Family Dna
Polymerase With Unique Structural Gap
pdb|2RDJ|A Chain A, Snapshots Of A Y-family Dna Polymerase In Replication:
Dpo4 In Apo And Binary/ternary Complex Forms
pdb|2RDJ|B Chain B, Snapshots Of A Y-family Dna Polymerase In Replication:
Dpo4 In Apo And Binary/ternary Complex Forms
pdb|2R8G|A Chain A, Selectivity Of Nucleoside Triphosphate Incorporation
Opposite 1,N2-Propanodeoxyguanosine (Pdg) By The
Sulfolobus Solfataricus Dna Polymerase Dpo4 Polymerase
pdb|2R8H|A Chain A, Selectivity Of Nucleoside Triphosphate Incorporation
Opposite 1,N2- Propanodeoxyguanosine (Pdg) By The
Sulfolobus Solfataricus Dna Polymerase Dpo4 Polymerase
pdb|2R8I|A Chain A, Selectivity Of Nucleoside Triphosphate Incorporation
Opposite 1,N2-Propanodeoxyguanosine (Pdg) By The
Sulfolobus Solfataricus Dna Polymerase Dpo4 Polymerase
pdb|3FDS|A Chain A, Structural Insight Into Recruitment Of Translesion Dna
Polymerase Dpo4 To Sliding Clamp Pcna
pdb|3M9M|B Chain B, Crystal Structure Of Dpo4 In Complex With Dna Containing
The Major Cisplatin Lesion
pdb|3M9N|B Chain B, Crystal Structure Of Dpo4 In Complex With Dna Containing
The Major Cisplatin Lesion
pdb|3M9O|B Chain B, Crystal Structure Of Dpo4 In Complex With Dna Containing
The Major Cisplatin Lesion
Length = 352
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSV 124
DEE+ L + + DV G G IT+E+L+ +
Sbjct: 168 DEEVKRLIRELDIADVPGIGNITAEKLKKL 197
>pdb|4GC7|A Chain A, Crystal Structure Of Dpo4 In Complex With S-mc-dadp
Opposite Dt
pdb|4GC7|B Chain B, Crystal Structure Of Dpo4 In Complex With S-mc-dadp
Opposite Dt
Length = 359
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSV 124
DEE+ L + + DV G G IT+E+L+ +
Sbjct: 175 DEEVKRLIRELDIADVPGIGNITAEKLKKL 204
>pdb|3QZ7|A Chain A, T-3 Ternary Complex Of Dpo4
pdb|3QZ8|A Chain A, Tt-4 Ternary Complex Of Dpo4
Length = 360
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSV 124
DEE+ L + + DV G G IT+E+L+ +
Sbjct: 168 DEEVKRLIRELDIADVPGIGNITAEKLKKL 197
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 101 LYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQPRLQKHD 143
L AF FD +G G IT+EEL + + DE LQ+ D
Sbjct: 125 LLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECD 167
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 21/30 (70%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLE 34
+A+D++++F LD++ G + +EL +L+
Sbjct: 39 SADDVKKVFHILDKDKSGFIEEDELGSILK 68
>pdb|2ASD|A Chain A, Oxog-Modified Insertion Ternary Complex
pdb|2ASD|B Chain B, Oxog-Modified Insertion Ternary Complex
pdb|2ASJ|A Chain A, Oxog-Modified Preinsertion Binary Complex
pdb|2ASJ|B Chain B, Oxog-Modified Preinsertion Binary Complex
pdb|2ASL|A Chain A, Oxog-Modified Postinsertion Binary Complex
pdb|2ASL|B Chain B, Oxog-Modified Postinsertion Binary Complex
pdb|2ATL|A Chain A, Unmodified Insertion Ternary Complex
pdb|2ATL|B Chain B, Unmodified Insertion Ternary Complex
pdb|2AU0|A Chain A, Unmodified Preinsertion Binary Complex
pdb|2AU0|B Chain B, Unmodified Preinsertion Binary Complex
Length = 360
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSV 124
DEE+ L + + DV G G IT+E+L+ +
Sbjct: 176 DEEVKRLIRELDIADVPGIGNITAEKLKKL 205
>pdb|2UVV|A Chain A, Crystal Structures Of Mutant Dpo4 Dna Polymerases With 8-
Oxog Containing Dna Template-Primer Constructs
pdb|2UVW|A Chain A, Crystal Structures Of Mutant Dpo4 Dna Polymerases With 8-
Oxog Containing Dna Template-Primer Constructs
Length = 358
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSV 124
DEE+ L + + DV G G IT+E+L+ +
Sbjct: 174 DEEVKRLIRELDIADVPGIGNITAEKLKKL 203
>pdb|2UVR|A Chain A, Crystal Structures Of Mutant Dpo4 Dna Polymerases With 8-
Oxog Containing Dna Template-Primer Constructs
pdb|2UVU|A Chain A, Crystal Structures Of Mutant Dpo4 Dna Polymerases With 8-
Oxog Containing Dna Template-Primer Constructs
Length = 358
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSV 124
DEE+ L + + DV G G IT+E+L+ +
Sbjct: 174 DEEVKRLIRELDIADVPGIGNITAEKLKKL 203
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 8/22 (36%), Positives = 18/22 (81%)
Query: 104 AFSVFDVNGDGFITSEELQSVL 125
AFS++D++G+G+I+ E+ ++
Sbjct: 104 AFSMYDLDGNGYISKAEMLEIV 125
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E
MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E
MUTANT
Length = 109
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 21/30 (70%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLE 34
+A+D++++F LD++ G + +EL +L+
Sbjct: 39 SADDVKKVFHILDKDKSGFIEEDELGSILK 68
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component
From Muscle Of The Leopard Shark (Triakis
Semifasciata). The First X-Ray Study Of An
Alpha-Parvalbumin
Length = 109
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVH 39
T ++ +FE LD++ G + EEL VL+ H
Sbjct: 39 TDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAH 73
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 21/30 (70%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLE 34
+A+D++++F LD++ G + +EL +L+
Sbjct: 39 SADDVKKVFHILDKDKSGFIEEDELGSILK 68
>pdb|1JX4|A Chain A, Crystal Structure Of A Y-Family Dna Polymerase In A
Ternary Complex With Dna Substrates And An Incoming
Nucleotide
Length = 352
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSV 124
DEE+ L + + DV G G IT+E+L+ +
Sbjct: 168 DEEVKRLIRELDIADVPGIGNITAEKLKKL 197
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 109 DVNGDGFITSEELQSV---LARLGLWDEEKQPRLQKHDLRV 146
DV GDGFI+ E+ + + +A++ EK ++ LRV
Sbjct: 24 DVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRV 64
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 25.8 bits (55), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 109 DVNGDGFITSEELQSV---LARLGLWDEEKQPRLQKHDLRV 146
DV GDGFI+ E+ + + +A++ EK ++ LRV
Sbjct: 24 DVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRV 64
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 25.8 bits (55), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 12 IFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKP 52
I E++ + DGL EE +WV +R+ + T + L L + P
Sbjct: 142 IRERVSKTLDGLPVGEEFDWV-DRVSIEITTQMLATLFDFP 181
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 25.8 bits (55), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 21 DGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLFF 62
DG +S +EL V+ +G + T EEL+ ++++ ++ FDE+L
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVM 80
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 25.8 bits (55), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 10 QRIFEKLDRNGDGLVSLEELNWVLER 35
+ +F+++D NGDG VS EE+ + +
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSK 28
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 25.8 bits (55), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 95 DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQPRL 139
+E+ ++ +AF +FD N G I EL+ + LG + K+P +
Sbjct: 3 EEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGF--DVKKPEI 45
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 25.8 bits (55), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 21 DGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLFF 62
DG +S +EL V+ +G + T EEL+ ++++ ++ FDE+L
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVM 80
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 4 LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVH 39
LT +LQ ++ DR+GDG VS +E + ++ ++
Sbjct: 137 LTDEELQEXIDEADRDGDGEVSEQEFLRIXKKTSLY 172
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 101 LYKAFSVFDVNGDGFITSEELQSVLARLGLWDEEKQPRLQKHD 143
L AF FD +G G IT+EEL + + DE LQ+ D
Sbjct: 399 LLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECD 441
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 21/30 (70%)
Query: 5 TANDLQRIFEKLDRNGDGLVSLEELNWVLE 34
+A+D++++F LD++ G + +EL +L+
Sbjct: 3 SADDVKKVFHILDKDKSGFIEEDELGSILK 32
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 25.8 bits (55), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 21 DGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFL 60
DG +S +EL V +G + T EEL+ +++ ++ FDEFL
Sbjct: 33 DGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEFL 78
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.140 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,864,588
Number of Sequences: 62578
Number of extensions: 131490
Number of successful extensions: 1372
Number of sequences better than 100.0: 290
Number of HSP's better than 100.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 545
Number of HSP's gapped (non-prelim): 811
length of query: 146
length of database: 14,973,337
effective HSP length: 90
effective length of query: 56
effective length of database: 9,341,317
effective search space: 523113752
effective search space used: 523113752
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 46 (22.3 bits)