Query 032170
Match_columns 146
No_of_seqs 295 out of 1609
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 17:02:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032170.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032170hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.7 9.6E-16 3.3E-20 92.1 9.0 67 23-90 1-67 (68)
2 3dxs_X Copper-transporting ATP 99.6 2E-14 6.9E-19 87.2 9.8 67 23-89 1-71 (74)
3 4a4j_A Pacszia, cation-transpo 99.6 4E-14 1.4E-18 84.6 9.9 64 24-87 2-68 (69)
4 3fry_A Probable copper-exporti 99.5 3.9E-14 1.3E-18 86.0 8.7 66 22-89 3-69 (73)
5 1cc8_A Protein (metallochapero 99.5 1.2E-13 4.2E-18 83.6 10.3 67 23-89 4-71 (73)
6 2crl_A Copper chaperone for su 99.4 9.4E-13 3.2E-17 84.6 10.1 71 22-92 17-87 (98)
7 2l3m_A Copper-ION-binding prot 99.4 3.5E-12 1.2E-16 75.8 10.0 64 22-85 3-70 (71)
8 2xmm_A SSR2857 protein, ATX1; 99.4 8.9E-13 3E-17 76.7 6.7 60 26-85 3-63 (64)
9 2k2p_A Uncharacterized protein 99.4 7.3E-13 2.5E-17 83.0 6.7 67 19-85 17-84 (85)
10 2roe_A Heavy metal binding pro 99.4 9.1E-13 3.1E-17 77.7 6.5 61 27-87 3-64 (66)
11 2xmw_A PACS-N, cation-transpor 99.4 6.4E-12 2.2E-16 74.4 10.1 64 24-87 3-69 (71)
12 1osd_A MERP, hypothetical prot 99.4 5E-12 1.7E-16 75.2 9.5 65 23-87 2-70 (72)
13 1mwy_A ZNTA; open-faced beta-s 99.4 8.3E-12 2.8E-16 74.9 10.0 66 23-88 2-69 (73)
14 3cjk_B Copper-transporting ATP 99.4 1.3E-11 4.5E-16 74.2 10.5 66 24-89 2-71 (75)
15 1aw0_A Menkes copper-transport 99.3 7.7E-12 2.6E-16 74.4 8.9 65 24-88 3-71 (72)
16 1q8l_A Copper-transporting ATP 99.3 7.2E-12 2.5E-16 77.6 8.8 68 23-90 8-79 (84)
17 2qif_A Copper chaperone COPZ; 99.3 1.5E-11 5E-16 71.9 9.7 63 23-85 1-67 (69)
18 1opz_A Potential copper-transp 99.3 1.4E-11 4.8E-16 73.8 9.6 68 21-88 3-74 (76)
19 1y3j_A Copper-transporting ATP 99.3 4.7E-12 1.6E-16 76.8 7.3 67 23-89 2-72 (77)
20 2g9o_A Copper-transporting ATP 99.3 1.1E-11 3.7E-16 78.1 9.0 67 24-90 3-76 (90)
21 1kvi_A Copper-transporting ATP 99.3 9.8E-12 3.4E-16 75.6 8.5 68 22-89 6-77 (79)
22 1fvq_A Copper-transporting ATP 99.3 1.9E-11 6.4E-16 72.7 8.9 65 25-89 3-70 (72)
23 1cpz_A Protein (COPZ); copper 99.3 1.6E-11 5.6E-16 72.0 8.6 61 27-87 3-67 (68)
24 2kt2_A Mercuric reductase; nme 99.3 1.8E-11 6.1E-16 72.4 8.4 62 27-88 3-67 (69)
25 1yg0_A COP associated protein; 99.3 1.6E-11 5.4E-16 71.7 7.7 61 25-85 2-65 (66)
26 2kkh_A Putative heavy metal tr 99.3 5E-11 1.7E-15 75.5 10.3 72 19-90 11-86 (95)
27 1jww_A Potential copper-transp 99.3 2.6E-11 9E-16 73.6 8.5 67 23-89 2-72 (80)
28 2ldi_A Zinc-transporting ATPas 99.3 2.3E-11 7.9E-16 71.7 7.6 64 23-86 2-69 (71)
29 2kyz_A Heavy metal binding pro 99.3 1.1E-11 3.8E-16 73.3 6.1 60 26-87 3-63 (67)
30 1yjr_A Copper-transporting ATP 99.2 3.3E-11 1.1E-15 72.1 7.8 64 25-88 5-72 (75)
31 2ofg_X Zinc-transporting ATPas 99.2 6E-11 2.1E-15 77.6 9.4 66 23-88 7-76 (111)
32 2ew9_A Copper-transporting ATP 99.2 7.7E-11 2.6E-15 79.8 8.9 64 24-87 80-147 (149)
33 1qup_A Superoxide dismutase 1 99.2 1.5E-10 5.2E-15 84.7 10.0 70 24-93 6-75 (222)
34 1p6t_A Potential copper-transp 99.2 1.1E-10 3.7E-15 79.4 8.5 67 23-89 73-143 (151)
35 2aj0_A Probable cadmium-transp 99.1 1.5E-10 5E-15 69.0 6.5 60 24-87 3-63 (71)
36 2rop_A Copper-transporting ATP 99.1 5.3E-10 1.8E-14 80.0 9.9 66 24-89 122-191 (202)
37 1jk9_B CCS, copper chaperone f 99.1 5.2E-10 1.8E-14 83.1 9.2 70 24-93 7-76 (249)
38 2ew9_A Copper-transporting ATP 99.1 9.2E-10 3.1E-14 74.4 8.9 66 23-88 3-72 (149)
39 1p6t_A Potential copper-transp 98.8 3.2E-08 1.1E-12 67.0 9.0 64 22-85 4-71 (151)
40 2rop_A Copper-transporting ATP 98.8 1.9E-08 6.5E-13 71.8 7.5 64 23-86 19-89 (202)
41 3j09_A COPA, copper-exporting 98.7 4.2E-08 1.5E-12 82.6 8.8 63 25-87 3-69 (723)
42 1jdq_A TM006 protein, hypothet 91.7 1.4 4.8E-05 27.5 7.7 55 26-89 27-84 (98)
43 3bpd_A Uncharacterized protein 90.5 0.65 2.2E-05 29.1 5.1 66 22-88 5-79 (100)
44 2x3d_A SSO6206; unknown functi 89.3 1.9 6.4E-05 26.8 6.4 66 22-88 3-78 (96)
45 2raq_A Conserved protein MTH88 89.0 1.8 6.2E-05 26.9 6.2 65 23-88 6-79 (97)
46 3lvj_C Sulfurtransferase TUSA; 87.3 3.2 0.00011 24.7 6.7 55 26-89 11-68 (82)
47 3cq1_A Putative uncharacterize 85.8 1.3 4.6E-05 27.6 4.5 35 25-59 42-82 (103)
48 1je3_A EC005, hypothetical 8.6 85.1 1.7 5.9E-05 27.0 4.7 55 25-88 27-84 (97)
49 3hz7_A Uncharacterized protein 83.7 4 0.00014 24.7 5.9 54 27-89 3-60 (87)
50 2jsx_A Protein NAPD; TAT, proo 83.6 5.8 0.0002 24.5 6.6 47 35-81 16-63 (95)
51 1uwd_A Hypothetical protein TM 82.9 2.1 7.1E-05 26.7 4.4 35 25-59 43-83 (103)
52 3lno_A Putative uncharacterize 75.8 2.6 9.1E-05 26.5 3.3 35 26-60 46-87 (108)
53 1pav_A Hypothetical protein TA 63.8 3.7 0.00013 24.1 1.8 52 27-87 8-62 (78)
54 1fvg_A Peptide methionine sulf 61.7 39 0.0013 23.8 7.1 55 22-81 42-118 (199)
55 4gwb_A Peptide methionine sulf 59.6 25 0.00085 24.1 5.6 46 35-80 9-72 (168)
56 3bqh_A PILB, peptide methionin 55.9 39 0.0014 23.6 6.3 46 35-80 9-76 (193)
57 2j89_A Methionine sulfoxide re 55.3 44 0.0015 24.5 6.6 54 22-80 93-168 (261)
58 2lxf_A Uncharacterized protein 51.8 42 0.0015 21.5 5.5 59 21-80 31-94 (121)
59 1ff3_A Peptide methionine sulf 50.3 65 0.0022 22.8 7.0 47 35-81 49-117 (211)
60 2ko1_A CTR148A, GTP pyrophosph 49.4 32 0.0011 19.7 4.4 20 36-55 57-76 (88)
61 3e0m_A Peptide methionine sulf 49.2 50 0.0017 24.9 6.3 46 35-80 9-74 (313)
62 3b1j_C CP12; alpha/beta fold, 45.7 3.2 0.00011 19.4 -0.5 11 132-142 7-17 (26)
63 2k1h_A Uncharacterized protein 43.6 40 0.0014 20.6 4.2 43 35-80 36-80 (94)
64 1owx_A Lupus LA protein, SS-B, 41.8 66 0.0023 20.5 6.2 56 26-81 19-76 (121)
65 2f1f_A Acetolactate synthase i 41.7 62 0.0021 21.8 5.4 55 2-57 15-77 (164)
66 1nwa_A Peptide methionine sulf 32.9 65 0.0022 22.7 4.4 46 35-80 32-95 (203)
67 3pro_C Alpha-lytic protease; P 31.8 84 0.0029 21.3 4.7 35 49-83 114-149 (166)
68 2w7v_A General secretion pathw 31.6 90 0.0031 19.1 5.2 49 40-89 16-70 (95)
69 2pc6_A Probable acetolactate s 29.8 86 0.0029 21.2 4.5 55 2-57 16-78 (165)
70 2nyt_A Probable C->U-editing e 29.4 62 0.0021 22.4 3.8 62 25-89 84-146 (190)
71 1t1v_A SH3BGRL3, SH3 domain-bi 29.0 60 0.0021 18.9 3.3 34 25-59 3-41 (93)
72 3pim_A Peptide methionine sulf 28.7 1.1E+02 0.0038 21.2 5.0 35 22-61 18-54 (187)
73 1kaf_A Transcription regulator 27.6 1.1E+02 0.0038 19.2 4.3 41 48-89 43-83 (108)
74 2fi0_A Conserved domain protei 26.9 51 0.0017 19.3 2.6 18 69-86 61-78 (81)
75 3qv1_G CP12 protein; rossman f 25.4 12 0.0004 22.6 -0.5 16 130-145 62-79 (82)
76 4e6k_G BFD, bacterioferritin-a 25.1 32 0.0011 19.9 1.5 19 29-47 33-51 (73)
77 2j58_A WZA, outer membrane lip 23.7 1.5E+02 0.005 22.5 5.3 56 27-83 113-183 (359)
78 1pqx_A Conserved hypothetical 21.7 50 0.0017 20.1 1.9 43 35-80 36-80 (91)
79 2yy3_A Elongation factor 1-bet 21.7 1.4E+02 0.0048 18.0 4.0 21 37-57 66-86 (91)
80 2y9j_Y Lipoprotein PRGK, prote 20.1 84 0.0029 21.3 3.0 20 38-57 90-109 (170)
81 1xhj_A Nitrogen fixation prote 20.0 1.3E+02 0.0045 18.0 3.6 32 25-56 39-78 (88)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.65 E-value=9.6e-16 Score=92.05 Aligned_cols=67 Identities=21% Similarity=0.470 Sum_probs=62.2
Q ss_pred ceEEEEEEcCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEecc
Q 032170 23 MQTVDIKVKMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEFWPY 90 (146)
Q Consensus 23 ~~~~~l~V~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~~~ 90 (146)
|.+.+|.|||+|.+|+.+|+++|++++|| ++++|+..++++|.+..++++|.++|+++||.+.+++.
T Consensus 1 m~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp -CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred CceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence 45678888999999999999999999999 99999999999999989999999999999999998873
No 2
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.58 E-value=2e-14 Score=87.17 Aligned_cols=67 Identities=24% Similarity=0.415 Sum_probs=62.2
Q ss_pred ceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEec
Q 032170 23 MQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFWP 89 (146)
Q Consensus 23 ~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~~~ 89 (146)
|++++|.| ||+|.+|+.+|+++|++++||.++.+|+..++++|..+ ++.++|.++|+++||+++++.
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence 56789999 99999999999999999999999999999999999853 689999999999999998875
No 3
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.56 E-value=4e-14 Score=84.61 Aligned_cols=64 Identities=27% Similarity=0.548 Sum_probs=59.7
Q ss_pred eEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEE--ecCCHHHHHHHHHhcCCceEE
Q 032170 24 QTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVT--GYVDPNKVLKKVKSTGKRAEF 87 (146)
Q Consensus 24 ~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~--~~~~~~~i~~~i~~~G~~~~~ 87 (146)
++++|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|. +..+.++|.++|+++||++++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~ 68 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV 68 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEe
Confidence 4678999 999999999999999999999999999999999998 458999999999999999875
No 4
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.54 E-value=3.9e-14 Score=86.02 Aligned_cols=66 Identities=23% Similarity=0.443 Sum_probs=62.4
Q ss_pred CceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEec
Q 032170 22 PMQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEFWP 89 (146)
Q Consensus 22 ~~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~~ 89 (146)
.|.+.+|.| ||+|.+|+.+|+++|++ +||..+.+|+..++++|..+ +.++|.++|+++||.+.+.+
T Consensus 3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~ 69 (73)
T 3fry_A 3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRS 69 (73)
T ss_dssp CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECC
T ss_pred ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecC
Confidence 477889999 99999999999999999 99999999999999999988 99999999999999998876
No 5
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.53 E-value=1.2e-13 Score=83.58 Aligned_cols=67 Identities=21% Similarity=0.412 Sum_probs=62.7
Q ss_pred ceEEEEEEcCcCHhHHHHHHHHHhCCC-CceEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEec
Q 032170 23 MQTVDIKVKMDCDGCERKVRNAVSSIR-GAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEFWP 89 (146)
Q Consensus 23 ~~~~~l~V~m~C~~C~~~i~~~L~~~~-GV~~v~vd~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~~ 89 (146)
+.+.+|+|.|+|.+|+.+|+++|.+++ ||.++++|+..++++|.+..+.++|.+.|+++||++.++.
T Consensus 4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (73)
T 1cc8_A 4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGK 71 (73)
T ss_dssp CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence 567788999999999999999999999 9999999999999999988899999999999999988765
No 6
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=9.4e-13 Score=84.62 Aligned_cols=71 Identities=24% Similarity=0.417 Sum_probs=65.0
Q ss_pred CceEEEEEEcCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEeccCC
Q 032170 22 PMQTVDIKVKMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEFWPYVP 92 (146)
Q Consensus 22 ~~~~~~l~V~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~~~~~ 92 (146)
.+.+++|+|.|+|.+|+.+|+++|.+++||.++.+|+..++++|.+..+.++|.+.|+++||++.++..+.
T Consensus 17 ~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~ 87 (98)
T 2crl_A 17 TLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGS 87 (98)
T ss_dssp CCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESCC
T ss_pred cceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCCC
Confidence 45677888899999999999999999999999999999999999988899999999999999999887543
No 7
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.41 E-value=3.5e-12 Score=75.82 Aligned_cols=64 Identities=22% Similarity=0.438 Sum_probs=58.2
Q ss_pred CceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCce
Q 032170 22 PMQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRA 85 (146)
Q Consensus 22 ~~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~ 85 (146)
.|.+..|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|..+ .+.+.|.+.|+++||.+
T Consensus 3 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 3 AMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp SEEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred CcEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 467789999 99999999999999999999999999999999998743 67889999999999975
No 8
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.39 E-value=8.9e-13 Score=76.70 Aligned_cols=60 Identities=22% Similarity=0.462 Sum_probs=56.3
Q ss_pred EEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEecCCHHHHHHHHHhcCCce
Q 032170 26 VDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRA 85 (146)
Q Consensus 26 ~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~~~~~~i~~~i~~~G~~~ 85 (146)
..|.| ||+|.+|+.+|+++|.+++||.++.+++..++++|.+..+.+.|.+.|+++||.+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV 63 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 47999 9999999999999999999999999999999999997788899999999999975
No 9
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.39 E-value=7.3e-13 Score=82.98 Aligned_cols=67 Identities=16% Similarity=0.293 Sum_probs=58.7
Q ss_pred CCCCceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEecCCHHHHHHHHHhcCCce
Q 032170 19 KRKPMQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRA 85 (146)
Q Consensus 19 ~~~~~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~~~~~~i~~~i~~~G~~~ 85 (146)
....+.+.+|.| ||+|..|+.+|+++|.+++||.++++|+..++++|....+.+.|.+.|+++||.+
T Consensus 17 ~~~~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 17 LYFQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP 84 (85)
T ss_dssp -----CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred ccccccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 334567788999 9999999999999999999999999999999999998788999999999999974
No 10
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.39 E-value=9.1e-13 Score=77.75 Aligned_cols=61 Identities=31% Similarity=0.582 Sum_probs=56.5
Q ss_pred EEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEE
Q 032170 27 DIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEF 87 (146)
Q Consensus 27 ~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~ 87 (146)
.|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|.+..+.+.|.+.|+++||.+..
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~ 64 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEV 64 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEE
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEe
Confidence 5889 999999999999999999999999999999999996557889999999999998764
No 11
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.38 E-value=6.4e-12 Score=74.44 Aligned_cols=64 Identities=23% Similarity=0.468 Sum_probs=57.4
Q ss_pred eEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec--CCHHHHHHHHHhcCCceEE
Q 032170 24 QTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY--VDPNKVLKKVKSTGKRAEF 87 (146)
Q Consensus 24 ~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~--~~~~~i~~~i~~~G~~~~~ 87 (146)
++..|.| ||+|.+|+.+|+++|.+++||.++.+++..++++|..+ .+.+.|.+.|+++||.+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~ 69 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV 69 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEE
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCcee
Confidence 5678999 99999999999999999999999999999999998754 6788899999999998764
No 12
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.38 E-value=5e-12 Score=75.24 Aligned_cols=65 Identities=28% Similarity=0.425 Sum_probs=58.7
Q ss_pred ceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEE
Q 032170 23 MQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEF 87 (146)
Q Consensus 23 ~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~ 87 (146)
+++..|.| ||+|.+|+.+|+++|.+++||.++.+++..++++|..+ .+.+.|.+.|+++||.+.+
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1osd_A 2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSV 70 (72)
T ss_dssp EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred ceEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence 45678999 99999999999999999999999999999999999743 5788999999999998765
No 13
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.37 E-value=8.3e-12 Score=74.89 Aligned_cols=66 Identities=27% Similarity=0.324 Sum_probs=58.5
Q ss_pred ceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEecC-CHHHHHHHHHhcCCceEEe
Q 032170 23 MQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYV-DPNKVLKKVKSTGKRAEFW 88 (146)
Q Consensus 23 ~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~~-~~~~i~~~i~~~G~~~~~~ 88 (146)
|.++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+. ..+.|.+.|+++||.+...
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE 69 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEEC
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCccccc
Confidence 66788999 999999999999999999999999999999999998552 3678899999999987643
No 14
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.36 E-value=1.3e-11 Score=74.22 Aligned_cols=66 Identities=18% Similarity=0.400 Sum_probs=59.3
Q ss_pred eEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEec
Q 032170 24 QTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFWP 89 (146)
Q Consensus 24 ~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~~~ 89 (146)
.++.|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|..+ .+.+.|.+.|+++||.+.+..
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (75)
T 3cjk_B 2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 71 (75)
T ss_dssp EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence 3568999 99999999999999999999999999999999999853 578899999999999887654
No 15
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.35 E-value=7.7e-12 Score=74.39 Aligned_cols=65 Identities=25% Similarity=0.381 Sum_probs=58.3
Q ss_pred eEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEe
Q 032170 24 QTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFW 88 (146)
Q Consensus 24 ~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~~ 88 (146)
++..|.| ||+|.+|+.+|+++|.+++||.++.+++..++++|..+ .+.+.|.+.|+++||.+.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS 71 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEeC
Confidence 3568999 99999999999999999999999999999999999854 57889999999999987653
No 16
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.34 E-value=7.2e-12 Score=77.56 Aligned_cols=68 Identities=16% Similarity=0.346 Sum_probs=61.0
Q ss_pred ceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEecc
Q 032170 23 MQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFWPY 90 (146)
Q Consensus 23 ~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~~~~ 90 (146)
..++.|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|..+ .+.+.|.+.|+++||.+.+...
T Consensus 8 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 79 (84)
T 1q8l_A 8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQ 79 (84)
T ss_dssp CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCC
T ss_pred ceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCC
Confidence 45678999 99999999999999999999999999999999999853 5788999999999999876653
No 17
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.34 E-value=1.5e-11 Score=71.93 Aligned_cols=63 Identities=24% Similarity=0.457 Sum_probs=56.6
Q ss_pred ceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCce
Q 032170 23 MQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRA 85 (146)
Q Consensus 23 ~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~ 85 (146)
|.+..|.| ||+|.+|+.+|+++|.+++||.++.+++..++++|..+ .+.+.|.+.|+++||.+
T Consensus 1 m~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred CeEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 34668999 99999999999999999999999999999999998743 57888999999999865
No 18
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.33 E-value=1.4e-11 Score=73.81 Aligned_cols=68 Identities=16% Similarity=0.335 Sum_probs=60.4
Q ss_pred CCceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEe
Q 032170 21 KPMQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFW 88 (146)
Q Consensus 21 ~~~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~~ 88 (146)
..+.+..|.| ||+|.+|+.+|+++|.+++||..+.+++..+++.|..+ .+.+.|.+.|+++||.+.++
T Consensus 3 ~~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 74 (76)
T 1opz_A 3 SEQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE 74 (76)
T ss_dssp CCCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred ccceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence 3467788999 99999999999999999999999999999999998743 57889999999999987654
No 19
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.33 E-value=4.7e-12 Score=76.78 Aligned_cols=67 Identities=18% Similarity=0.274 Sum_probs=60.7
Q ss_pred ceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEec
Q 032170 23 MQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFWP 89 (146)
Q Consensus 23 ~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~~~ 89 (146)
|+++.|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|..+ .+.+.|.+.|+++||.+.++.
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 72 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE 72 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence 67789999 99999999999999999999999999999999999753 578899999999999887654
No 20
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.32 E-value=1.1e-11 Score=78.10 Aligned_cols=67 Identities=18% Similarity=0.298 Sum_probs=59.4
Q ss_pred eEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhc---CCceEEecc
Q 032170 24 QTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKST---GKRAEFWPY 90 (146)
Q Consensus 24 ~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~---G~~~~~~~~ 90 (146)
.++.|.| ||+|.+|+.+|+++|.+++||.++++++..++++|..+ ++.+.|.+.|+++ ||++.++..
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~ 76 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSE 76 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCC
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCC
Confidence 4568999 99999999999999999999999999999999999743 5778999999999 598877663
No 21
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.32 E-value=9.8e-12 Score=75.60 Aligned_cols=68 Identities=18% Similarity=0.388 Sum_probs=60.7
Q ss_pred CceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEec
Q 032170 22 PMQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFWP 89 (146)
Q Consensus 22 ~~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~~~ 89 (146)
.+.++.|.| ||+|.+|+.+|+++|.+++||.++.+++..++++|..+ .+.+.|.+.|+++||.+.+..
T Consensus 6 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 77 (79)
T 1kvi_A 6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 77 (79)
T ss_dssp TCEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECC
T ss_pred CcEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecC
Confidence 356788999 99999999999999999999999999999999999753 577899999999999887654
No 22
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.31 E-value=1.9e-11 Score=72.68 Aligned_cols=65 Identities=17% Similarity=0.369 Sum_probs=58.8
Q ss_pred EEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec--CCHHHHHHHHHhcCCceEEec
Q 032170 25 TVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY--VDPNKVLKKVKSTGKRAEFWP 89 (146)
Q Consensus 25 ~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~--~~~~~i~~~i~~~G~~~~~~~ 89 (146)
+..|.| ||+|.+|+.+|+++|.+++||.++.+++..++++|..+ .+.+.|.+.|++.||.+.++.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~ 70 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence 467999 99999999999999999999999999999999998753 577899999999999988764
No 23
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.31 E-value=1.6e-11 Score=72.03 Aligned_cols=61 Identities=28% Similarity=0.507 Sum_probs=55.9
Q ss_pred EEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEE
Q 032170 27 DIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEF 87 (146)
Q Consensus 27 ~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~ 87 (146)
.|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|..+ .+.+.|.+.|++.||.+++
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 67 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV 67 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence 5899 99999999999999999999999999999999999853 5788999999999998764
No 24
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.30 E-value=1.8e-11 Score=72.37 Aligned_cols=62 Identities=23% Similarity=0.444 Sum_probs=56.1
Q ss_pred EEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec--CCHHHHHHHHHhcCCceEEe
Q 032170 27 DIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY--VDPNKVLKKVKSTGKRAEFW 88 (146)
Q Consensus 27 ~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~--~~~~~i~~~i~~~G~~~~~~ 88 (146)
.|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|..+ .+.++|.+.|+++||.+.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 67 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLA 67 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeC
Confidence 5889 99999999999999999999999999999999998743 57889999999999987653
No 25
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.29 E-value=1.6e-11 Score=71.70 Aligned_cols=61 Identities=18% Similarity=0.376 Sum_probs=55.1
Q ss_pred EEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec--CCHHHHHHHHHhcCCce
Q 032170 25 TVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY--VDPNKVLKKVKSTGKRA 85 (146)
Q Consensus 25 ~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~--~~~~~i~~~i~~~G~~~ 85 (146)
+..|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|..+ .+.+.|.+.|+++||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence 357899 99999999999999999999999999999999999854 47788999999999864
No 26
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.28 E-value=5e-11 Score=75.48 Aligned_cols=72 Identities=21% Similarity=0.226 Sum_probs=63.2
Q ss_pred CCCCceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEecc
Q 032170 19 KRKPMQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFWPY 90 (146)
Q Consensus 19 ~~~~~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~~~~ 90 (146)
....|.+..|.| ||+|.+|+.+|+++|.+++||..+.+++..+++.|..+ ++.+.|.+.|+.+||.+.+...
T Consensus 11 ~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 86 (95)
T 2kkh_A 11 KVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVN 86 (95)
T ss_dssp CSSCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCC
T ss_pred cccceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecC
Confidence 334577889999 99999999999999999999999999999999999854 4788899999999999877654
No 27
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.27 E-value=2.6e-11 Score=73.56 Aligned_cols=67 Identities=18% Similarity=0.345 Sum_probs=60.0
Q ss_pred ceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEec
Q 032170 23 MQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFWP 89 (146)
Q Consensus 23 ~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~~~ 89 (146)
|.+..|.| ||+|.+|+.+|+++|.+++||..+.+++..+++.|..+ .+.+.|.+.|+++||.+.+..
T Consensus 2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 72 (80)
T 1jww_A 2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG 72 (80)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECC
T ss_pred ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecC
Confidence 55678999 99999999999999999999999999999999998743 578889999999999887754
No 28
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.26 E-value=2.3e-11 Score=71.67 Aligned_cols=64 Identities=22% Similarity=0.426 Sum_probs=57.1
Q ss_pred ceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceE
Q 032170 23 MQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAE 86 (146)
Q Consensus 23 ~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~ 86 (146)
+.+..|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|..+ .+.+.+.+.++++||.+.
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA 69 (71)
T ss_dssp CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 45678999 99999999999999999999999999999999998743 567889999999999764
No 29
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.26 E-value=1.1e-11 Score=73.27 Aligned_cols=60 Identities=25% Similarity=0.420 Sum_probs=54.5
Q ss_pred EEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEE
Q 032170 26 VDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEF 87 (146)
Q Consensus 26 ~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~ 87 (146)
..|.| ||+|.+|+.+|+++|.++ ||..+.+|+..++++|..+.+ +.|.+.|+++||.+..
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~~ 63 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVES 63 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCCB
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCceee
Confidence 57999 999999999999999999 999999999999999986655 8899999999997653
No 30
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.25 E-value=3.3e-11 Score=72.13 Aligned_cols=64 Identities=17% Similarity=0.407 Sum_probs=57.0
Q ss_pred EEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEe
Q 032170 25 TVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFW 88 (146)
Q Consensus 25 ~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~~ 88 (146)
++.|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|..+ .+.+.|.+.|+++||.+.+.
T Consensus 5 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 72 (75)
T 1yjr_A 5 VLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLV 72 (75)
T ss_dssp CEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEES
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceee
Confidence 467999 99999999999999999999999999999999999854 45678999999999987654
No 31
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.24 E-value=6e-11 Score=77.58 Aligned_cols=66 Identities=23% Similarity=0.400 Sum_probs=59.7
Q ss_pred ceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEe
Q 032170 23 MQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFW 88 (146)
Q Consensus 23 ~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~~ 88 (146)
+.++.|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|..+ ++.+.|.+.|+++||.+...
T Consensus 7 ~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~~ 76 (111)
T 2ofg_X 7 LKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAEP 76 (111)
T ss_dssp CEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEECC
T ss_pred ceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeeec
Confidence 67788999 99999999999999999999999999999999999854 57789999999999987643
No 32
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.21 E-value=7.7e-11 Score=79.81 Aligned_cols=64 Identities=17% Similarity=0.412 Sum_probs=58.7
Q ss_pred eEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEE
Q 032170 24 QTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEF 87 (146)
Q Consensus 24 ~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~ 87 (146)
.++.|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|..+ ++.++|.+.|+++||.+.+
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 147 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASL 147 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEEC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEe
Confidence 5678999 99999999999999999999999999999999999854 5789999999999998765
No 33
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.18 E-value=1.5e-10 Score=84.72 Aligned_cols=70 Identities=17% Similarity=0.380 Sum_probs=63.6
Q ss_pred eEEEEEEcCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEeccCCC
Q 032170 24 QTVDIKVKMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEFWPYVPY 93 (146)
Q Consensus 24 ~~~~l~V~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~~~~~~ 93 (146)
.+++|+|.|+|.+|+.+|+++|++++||.++++|+..++++|.+..++++|.++|+++||++.++..+..
T Consensus 6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~~~ 75 (222)
T 1qup_A 6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP 75 (222)
T ss_dssp EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCSCT
T ss_pred eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCCCc
Confidence 3457888899999999999999999999999999999999999888999999999999999998876543
No 34
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.18 E-value=1.1e-10 Score=79.44 Aligned_cols=67 Identities=18% Similarity=0.345 Sum_probs=60.9
Q ss_pred ceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEec
Q 032170 23 MQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFWP 89 (146)
Q Consensus 23 ~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~~~ 89 (146)
..++.|.| ||+|.+|+.+|+++|.+++||.++.+++..++++|..+ ++.++|.+.|+++||.+.+..
T Consensus 73 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 143 (151)
T 1p6t_A 73 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG 143 (151)
T ss_dssp CEEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESC
T ss_pred ccccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcC
Confidence 35678999 99999999999999999999999999999999999843 688999999999999987765
No 35
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=99.13 E-value=1.5e-10 Score=69.03 Aligned_cols=60 Identities=27% Similarity=0.477 Sum_probs=51.8
Q ss_pred eEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEE
Q 032170 24 QTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEF 87 (146)
Q Consensus 24 ~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~ 87 (146)
.+..|.| ||+|.+|+.+|+++|.+++||.++.+++..++++|.++.+ .+.|+++||.+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~~~ 63 (71)
T 2aj0_A 3 EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFEHL 63 (71)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTTTC
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCccc
Confidence 3568999 9999999999999999999999999999999999987654 4567788887544
No 36
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.11 E-value=5.3e-10 Score=80.04 Aligned_cols=66 Identities=20% Similarity=0.393 Sum_probs=59.9
Q ss_pred eEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEec
Q 032170 24 QTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFWP 89 (146)
Q Consensus 24 ~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~~~ 89 (146)
.++.|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|..+ ++.++|.+.|+++||.+.++.
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 191 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVS 191 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC-
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcC
Confidence 5678999 99999999999999999999999999999999999853 578999999999999988765
No 37
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.09 E-value=5.2e-10 Score=83.14 Aligned_cols=70 Identities=17% Similarity=0.380 Sum_probs=63.3
Q ss_pred eEEEEEEcCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEeccCCC
Q 032170 24 QTVDIKVKMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEFWPYVPY 93 (146)
Q Consensus 24 ~~~~l~V~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~~~~~~ 93 (146)
.+++|+|.|+|.+|+.+|+++|++++||.++++|+..++++|.+..++++|.++|+++||.+.+...+..
T Consensus 7 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~~~ 76 (249)
T 1jk9_B 7 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP 76 (249)
T ss_dssp EEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEESST
T ss_pred eeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccCCcc
Confidence 3457888899999999999999999999999999999999999888999999999999999988775543
No 38
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.06 E-value=9.2e-10 Score=74.41 Aligned_cols=66 Identities=17% Similarity=0.283 Sum_probs=59.7
Q ss_pred ceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEe
Q 032170 23 MQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFW 88 (146)
Q Consensus 23 ~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~~ 88 (146)
|+++.|.| ||+|.+|+.+|+++|.+++||..+.+++..+++.|..+ .+.+.+.+.|++.||.+.+.
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 72 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVM 72 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEee
Confidence 67889999 99999999999999999999999999999999998742 57788999999999987754
No 39
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.80 E-value=3.2e-08 Score=66.98 Aligned_cols=64 Identities=17% Similarity=0.383 Sum_probs=56.2
Q ss_pred CceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCce
Q 032170 22 PMQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRA 85 (146)
Q Consensus 22 ~~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~ 85 (146)
.+.+..|.| ||+|.+|+.+|+++|.+++||..+.+++..+++.|..+ .+...+.+.+++.||.+
T Consensus 4 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 71 (151)
T 1p6t_A 4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV 71 (151)
T ss_dssp CCEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred cceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence 345678999 99999999999999999999999999999999988643 57788999999999864
No 40
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.78 E-value=1.9e-08 Score=71.84 Aligned_cols=64 Identities=14% Similarity=0.379 Sum_probs=55.6
Q ss_pred ceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcC---CceE
Q 032170 23 MQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTG---KRAE 86 (146)
Q Consensus 23 ~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G---~~~~ 86 (146)
+.++.|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|..+ .+.+.|.+.|+++| |.+.
T Consensus 19 ~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~ 89 (202)
T 2rop_A 19 VVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVS 89 (202)
T ss_dssp -CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEE
T ss_pred cEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEE
Confidence 56778999 99999999999999999999999999999999999743 57788999999883 5553
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.71 E-value=4.2e-08 Score=82.60 Aligned_cols=63 Identities=21% Similarity=0.335 Sum_probs=57.6
Q ss_pred EEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEE
Q 032170 25 TVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEF 87 (146)
Q Consensus 25 ~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~ 87 (146)
+++|+| ||+|.+|+.+|+++|++++||.++++|+.+++++|..+ .+.+++.+.+++.||++..
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~ 69 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVD 69 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESS
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCcccc
Confidence 357999 99999999999999999999999999999999999843 6899999999999998753
No 42
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=91.67 E-value=1.4 Score=27.49 Aligned_cols=55 Identities=13% Similarity=0.121 Sum_probs=42.1
Q ss_pred EEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec--CCHHHHHHHHHhcCCceEEec
Q 032170 26 VDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY--VDPNKVLKKVKSTGKRAEFWP 89 (146)
Q Consensus 26 ~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~--~~~~~i~~~i~~~G~~~~~~~ 89 (146)
.+|.. |+.|+.-.-+++++|.+++. .+.+.|..+ .....|.+.++..|+......
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~~a~~dI~~~~~~~G~~v~~~e 84 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVKKLGHEVLEIE 84 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHHHSSCCEEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 57899 99999999999999998742 234555433 446889999999999876543
No 43
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=90.46 E-value=0.65 Score=29.07 Aligned_cols=66 Identities=12% Similarity=0.171 Sum_probs=47.1
Q ss_pred CceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEe-----cCCCE--EEEEec-CCHHHHHHHHHhcCCceEEe
Q 032170 22 PMQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVN-----RKQSR--VTVTGY-VDPNKVLKKVKSTGKRAEFW 88 (146)
Q Consensus 22 ~~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd-----~~~~~--v~V~~~-~~~~~i~~~i~~~G~~~~~~ 88 (146)
..+++.|.| .-+-++- -.+-+.|.+++||..|++. ..+.. ++|+|. ++.++|.++|++.|.-..-.
T Consensus 5 ~iRRlVLDVlKPh~P~i-vdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIHSI 79 (100)
T 3bpd_A 5 GLRRLVLDVLKPHEPKT-IVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHSV 79 (100)
T ss_dssp SEEEEEEEEEEESCSCH-HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEEE
T ss_pred cceEEEEEecCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence 367778887 4455544 3566779999999988764 33333 345576 99999999999999765544
No 44
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=89.29 E-value=1.9 Score=26.84 Aligned_cols=66 Identities=11% Similarity=0.240 Sum_probs=46.8
Q ss_pred CceEEEEEE--cCcCHhHHHHHHHHHhCCCCceEEEEe-----cCCCE--EEEEec-CCHHHHHHHHHhcCCceEEe
Q 032170 22 PMQTVDIKV--KMDCDGCERKVRNAVSSIRGAKSVEVN-----RKQSR--VTVTGY-VDPNKVLKKVKSTGKRAEFW 88 (146)
Q Consensus 22 ~~~~~~l~V--~m~C~~C~~~i~~~L~~~~GV~~v~vd-----~~~~~--v~V~~~-~~~~~i~~~i~~~G~~~~~~ 88 (146)
..+++.|.| .++-++-. .+-+.|.+++||..+++. ..+.. ++|+|. ++.++|.++|++.|.-..-.
T Consensus 3 ~irRlVLDVlKP~h~P~iv-d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IHSI 78 (96)
T 2x3d_A 3 AIRRLVLDVLKPIRGTSIV-DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIHSI 78 (96)
T ss_dssp CEEEEEEEEEEESSSSCHH-HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEEEE
T ss_pred ceEEEEEEcccCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence 356677777 33655554 566779999999988764 33333 345576 89999999999999765543
No 45
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=88.95 E-value=1.8 Score=26.95 Aligned_cols=65 Identities=15% Similarity=0.295 Sum_probs=46.7
Q ss_pred ceEEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEe-----cCCCEE--EEEec-CCHHHHHHHHHhcCCceEEe
Q 032170 23 MQTVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVN-----RKQSRV--TVTGY-VDPNKVLKKVKSTGKRAEFW 88 (146)
Q Consensus 23 ~~~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd-----~~~~~v--~V~~~-~~~~~i~~~i~~~G~~~~~~ 88 (146)
.+++.|.| .-+-++-. .+-+.|.+++||..+++. ..+..+ +|+|. ++.++|.++|++.|.-..-.
T Consensus 6 irRlVLDVlKPh~p~i~-d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IHSI 79 (97)
T 2raq_A 6 LIRIVLDILKPHEPIIP-EYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHSV 79 (97)
T ss_dssp EEEEEEEEECCSCSCHH-HHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEEE
T ss_pred ceEEEEEecCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence 57778888 55555543 566778899999887754 444444 45576 99999999999999765543
No 46
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=87.26 E-value=3.2 Score=24.71 Aligned_cols=55 Identities=7% Similarity=0.035 Sum_probs=41.1
Q ss_pred EEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec--CCHHHHHHHHHhcCCceEEec
Q 032170 26 VDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY--VDPNKVLKKVKSTGKRAEFWP 89 (146)
Q Consensus 26 ~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~--~~~~~i~~~i~~~G~~~~~~~ 89 (146)
.++.. |+.|+.-.-+++++|.+++. .+.+.|..+ .....|...+++.|+......
T Consensus 11 ~~lD~rGl~CP~Pvl~~kkal~~l~~---------G~~l~V~~dd~~a~~di~~~~~~~G~~~~~~~ 68 (82)
T 3lvj_C 11 HTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDPATTRDIPGFCTFMEHELVAKE 68 (82)
T ss_dssp EEEECTTCCTTHHHHHHHHHHHTSCT---------TCEEEEEECCTTHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 57888 99999999999999998742 233444432 455788889999999876543
No 47
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=85.83 E-value=1.3 Score=27.59 Aligned_cols=35 Identities=29% Similarity=0.552 Sum_probs=26.4
Q ss_pred EEEEEEcCcCHhH------HHHHHHHHhCCCCceEEEEecC
Q 032170 25 TVDIKVKMDCDGC------ERKVRNAVSSIRGAKSVEVNRK 59 (146)
Q Consensus 25 ~~~l~V~m~C~~C------~~~i~~~L~~~~GV~~v~vd~~ 59 (146)
++.+.+.+++++| ...|+.+|.+++||.++++++.
T Consensus 42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~ 82 (103)
T 3cq1_A 42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT 82 (103)
T ss_dssp EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEe
Confidence 4456666677777 5678999999999998887743
No 48
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=85.09 E-value=1.7 Score=27.04 Aligned_cols=55 Identities=9% Similarity=0.045 Sum_probs=40.5
Q ss_pred EEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec--CCHHHHHHHHHhcCCceEEe
Q 032170 25 TVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY--VDPNKVLKKVKSTGKRAEFW 88 (146)
Q Consensus 25 ~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~--~~~~~i~~~i~~~G~~~~~~ 88 (146)
..++.+ |+.|+.-.-+++++|.+++. .+.+.|..+ ...+.|...++..|+.....
T Consensus 27 ~~~LD~rGl~CP~PvlktkkaL~~l~~---------Ge~L~Vl~dd~~a~~dIp~~~~~~G~~v~~~ 84 (97)
T 1je3_A 27 DYRLDMVGEPCPYPAVATLEAMPQLKK---------GEILEVVSDCPQSINNIPLDARNHGYTVLDI 84 (97)
T ss_dssp EEEECSBCCSSSSSTHHHHHHTTTCCS---------SCEEEEEEBCSSSSCHHHHHHHHHTCSEEEE
T ss_pred CeEEeCCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCcchHHHHHHHHHHCCCEEEEE
Confidence 457888 99999999999999998742 223444432 34567888899999987654
No 49
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=83.72 E-value=4 Score=24.71 Aligned_cols=54 Identities=17% Similarity=0.210 Sum_probs=40.4
Q ss_pred EEEE-cCcCHhHHHHHHHHHhCCC-CceEEEEecCCCEEEEEec--CCHHHHHHHHHhcCCceEEec
Q 032170 27 DIKV-KMDCDGCERKVRNAVSSIR-GAKSVEVNRKQSRVTVTGY--VDPNKVLKKVKSTGKRAEFWP 89 (146)
Q Consensus 27 ~l~V-~m~C~~C~~~i~~~L~~~~-GV~~v~vd~~~~~v~V~~~--~~~~~i~~~i~~~G~~~~~~~ 89 (146)
++.. |+.|+.-.-+++++|.+++ . .+.+.|..+ ...+.|...++..|+......
T Consensus 3 ~lD~rGl~CP~Pvl~~kkal~~l~~~---------G~~L~V~~dd~~a~~dI~~~~~~~G~~v~~~~ 60 (87)
T 3hz7_A 3 TIDALGQVCPIPVIRAKKALAELGEA---------GGVVTVLVDNDISRQNLQKMAEGMGYQSEYLE 60 (87)
T ss_dssp EEECTTCCTTHHHHHHHHHHHTTGGG---------CCEEEEEESSHHHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEcCCCCCCHHHHHHHHHHHhccCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 4788 9999999999999999883 1 234444433 456788889999999876543
No 50
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=83.58 E-value=5.8 Score=24.50 Aligned_cols=47 Identities=9% Similarity=0.181 Sum_probs=32.0
Q ss_pred HhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec-CCHHHHHHHHHhc
Q 032170 35 DGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY-VDPNKVLKKVKST 81 (146)
Q Consensus 35 ~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~-~~~~~i~~~i~~~ 81 (146)
++=...|.++|.+++|++-..++...+++.|+-+ .+.+++.+.|.+.
T Consensus 16 p~~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~~I 63 (95)
T 2jsx_A 16 SERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESV 63 (95)
T ss_dssp TTSHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHHHH
Confidence 3446789999999999954455666778776632 4566666665443
No 51
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=82.89 E-value=2.1 Score=26.66 Aligned_cols=35 Identities=26% Similarity=0.428 Sum_probs=25.1
Q ss_pred EEEEEEcCcCHhH------HHHHHHHHhCCCCceEEEEecC
Q 032170 25 TVDIKVKMDCDGC------ERKVRNAVSSIRGAKSVEVNRK 59 (146)
Q Consensus 25 ~~~l~V~m~C~~C------~~~i~~~L~~~~GV~~v~vd~~ 59 (146)
++.+.+.++.++| ...|+.+|.+++||.++++++.
T Consensus 43 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~ 83 (103)
T 1uwd_A 43 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELT 83 (103)
T ss_dssp EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEEC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEe
Confidence 4555555566555 4568899999999998887743
No 52
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=75.76 E-value=2.6 Score=26.50 Aligned_cols=35 Identities=23% Similarity=0.395 Sum_probs=24.7
Q ss_pred EEEEEcCcCHhH------HHHHHHHH-hCCCCceEEEEecCC
Q 032170 26 VDIKVKMDCDGC------ERKVRNAV-SSIRGAKSVEVNRKQ 60 (146)
Q Consensus 26 ~~l~V~m~C~~C------~~~i~~~L-~~~~GV~~v~vd~~~ 60 (146)
+.+.+-++.++| ...|+.+| .+++||.++++++.-
T Consensus 46 V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~ 87 (108)
T 3lno_A 46 AVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVVW 87 (108)
T ss_dssp EEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEECC
T ss_pred EEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEEe
Confidence 445555555555 56788889 899999988876543
No 53
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=63.75 E-value=3.7 Score=24.07 Aligned_cols=52 Identities=12% Similarity=0.049 Sum_probs=38.3
Q ss_pred EEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEec--CCHHHHHHHHHhcCCceEE
Q 032170 27 DIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY--VDPNKVLKKVKSTGKRAEF 87 (146)
Q Consensus 27 ~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~--~~~~~i~~~i~~~G~~~~~ 87 (146)
++.. |+.|+.-.-+++++|.+++. .+.+.|..+ .....|...++..|+....
T Consensus 8 ~lD~rGl~CP~Pvl~~k~al~~l~~---------G~~L~V~~dd~~a~~di~~~~~~~G~~~~~ 62 (78)
T 1pav_A 8 VIDARGSYCPGPLMELIKAYKQAKV---------GEVISVYSTDAGTKKDAPAWIQKSGQELVG 62 (78)
T ss_dssp CCCBSSCSSCTTHHHHHHHHTTSCT---------TCCEECCBSSSCHHHHHHHHHHHHTEEECC
T ss_pred EEECCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEE
Confidence 4778 99999999999999998742 223444432 3457888889999987643
No 54
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=61.75 E-value=39 Score=23.77 Aligned_cols=55 Identities=18% Similarity=0.137 Sum_probs=37.6
Q ss_pred CceEEEEEEcCcCHhHHHHHHHHHhCCCCceEEEEecCCCE-------------------EEEEec---CCHHHHHHHHH
Q 032170 22 PMQTVDIKVKMDCDGCERKVRNAVSSIRGAKSVEVNRKQSR-------------------VTVTGY---VDPNKVLKKVK 79 (146)
Q Consensus 22 ~~~~~~l~V~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~-------------------v~V~~~---~~~~~i~~~i~ 79 (146)
.++++.|. .+|-+-+|..+.+++||.++.+-...+. |.|..+ ++.++|++..-
T Consensus 42 ~~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~ 116 (199)
T 1fvg_A 42 GTQMAVFG-----MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFW 116 (199)
T ss_dssp TCEEEEEE-----ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred CceEEEEe-----cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 34555544 4677777888999999999998655443 445543 67888888765
Q ss_pred hc
Q 032170 80 ST 81 (146)
Q Consensus 80 ~~ 81 (146)
+.
T Consensus 117 ~~ 118 (199)
T 1fvg_A 117 EN 118 (199)
T ss_dssp HT
T ss_pred Hh
Confidence 43
No 55
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=59.60 E-value=25 Score=24.07 Aligned_cols=46 Identities=11% Similarity=0.223 Sum_probs=34.5
Q ss_pred HhHHHHHHHHHhCCCCceEEEEecCCC---------------EEEEEec---CCHHHHHHHHHh
Q 032170 35 DGCERKVRNAVSSIRGAKSVEVNRKQS---------------RVTVTGY---VDPNKVLKKVKS 80 (146)
Q Consensus 35 ~~C~~~i~~~L~~~~GV~~v~vd~~~~---------------~v~V~~~---~~~~~i~~~i~~ 80 (146)
.+|-.-+|..+.+++||.++.+-...+ .|.|..+ ++.++|++..-+
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~~ 72 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFFQ 72 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHHh
Confidence 467777889999999999999876554 3455543 788888887643
No 56
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=55.88 E-value=39 Score=23.61 Aligned_cols=46 Identities=17% Similarity=0.189 Sum_probs=32.8
Q ss_pred HhHHHHHHHHHhCCCCceEEEEecCCCE-------------------EEEEec---CCHHHHHHHHHh
Q 032170 35 DGCERKVRNAVSSIRGAKSVEVNRKQSR-------------------VTVTGY---VDPNKVLKKVKS 80 (146)
Q Consensus 35 ~~C~~~i~~~L~~~~GV~~v~vd~~~~~-------------------v~V~~~---~~~~~i~~~i~~ 80 (146)
.+|-.-++..+.+++||.++.+-...+. |.|..+ ++.++|++..-+
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~~ 76 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFR 76 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHHH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHHH
Confidence 4677777888999999999998654432 445533 788888887643
No 57
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=55.32 E-value=44 Score=24.54 Aligned_cols=54 Identities=20% Similarity=0.191 Sum_probs=36.9
Q ss_pred CceEEEEEEcCcCHhHHHHHHHHHhCCCCceEEEEecCCCE-------------------EEEEec---CCHHHHHHHHH
Q 032170 22 PMQTVDIKVKMDCDGCERKVRNAVSSIRGAKSVEVNRKQSR-------------------VTVTGY---VDPNKVLKKVK 79 (146)
Q Consensus 22 ~~~~~~l~V~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~-------------------v~V~~~---~~~~~i~~~i~ 79 (146)
.++++.|. .+|-+-+|..+.+++||.++.+-...+. |.|..+ ++.++|++..-
T Consensus 93 ~~e~a~fA-----gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw 167 (261)
T 2j89_A 93 GQQFAQFG-----AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLW 167 (261)
T ss_dssp TCEEEEEE-----ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred CCeEEEEe-----cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 34554444 4677777888999999999998654442 455543 67788888764
Q ss_pred h
Q 032170 80 S 80 (146)
Q Consensus 80 ~ 80 (146)
+
T Consensus 168 ~ 168 (261)
T 2j89_A 168 A 168 (261)
T ss_dssp H
T ss_pred H
Confidence 3
No 58
>2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia}
Probab=51.80 E-value=42 Score=21.53 Aligned_cols=59 Identities=10% Similarity=0.043 Sum_probs=34.5
Q ss_pred CCceEEEEEE-cCc-CHhHHHHHHHHHhCCCCceEEEEecCCCEEEEE--ec-CCHHHHHHHHHh
Q 032170 21 KPMQTVDIKV-KMD-CDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVT--GY-VDPNKVLKKVKS 80 (146)
Q Consensus 21 ~~~~~~~l~V-~m~-C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~--~~-~~~~~i~~~i~~ 80 (146)
....++.|+| |.- --+-...+.+...+ -|+..+.-|..+++|.|. |+ ...+++++.|++
T Consensus 31 ~di~t~~frV~G~VQGVGFR~~v~~~A~~-lgL~G~VrN~~dG~Vei~~eG~~~~v~~f~~~l~~ 94 (121)
T 2lxf_A 31 EDVTTLCYRVTGKVQGVFFRKYTKKEADA-LSLVGYVTNNEDGSVSGVVQGPKEQVDAFVKYLHK 94 (121)
T ss_dssp TTEEEEEEEEEECTTCCCCHHHHHHHHHH-HTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHHHH
T ss_pred cCEEEEEEEEEEeeCCcCchHHHHHHHHH-cCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHHh
Confidence 3456777888 543 22223333333222 277778888888877665 54 455667777754
No 59
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=50.25 E-value=65 Score=22.83 Aligned_cols=47 Identities=13% Similarity=0.061 Sum_probs=33.4
Q ss_pred HhHHHHHHHHHhCCCCceEEEEecCCC-------------------EEEEEec---CCHHHHHHHHHhc
Q 032170 35 DGCERKVRNAVSSIRGAKSVEVNRKQS-------------------RVTVTGY---VDPNKVLKKVKST 81 (146)
Q Consensus 35 ~~C~~~i~~~L~~~~GV~~v~vd~~~~-------------------~v~V~~~---~~~~~i~~~i~~~ 81 (146)
.+|-+-+|..+.+++||.++.+-...+ .|.|..+ ++.++|++..-+.
T Consensus 49 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~~~ 117 (211)
T 1ff3_A 49 MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWEN 117 (211)
T ss_dssp CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHHS
T ss_pred cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHHHh
Confidence 456667788899999999999865533 2445543 6888888876543
No 60
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=49.41 E-value=32 Score=19.66 Aligned_cols=20 Identities=15% Similarity=0.243 Sum_probs=11.1
Q ss_pred hHHHHHHHHHhCCCCceEEE
Q 032170 36 GCERKVRNAVSSIRGAKSVE 55 (146)
Q Consensus 36 ~C~~~i~~~L~~~~GV~~v~ 55 (146)
.-...+.+.|.+++||.++.
T Consensus 57 ~~l~~l~~~L~~~~~V~~v~ 76 (88)
T 2ko1_A 57 DKLTTLMDKLRKVQGVFTVE 76 (88)
T ss_dssp HHHHHHHHHHTTCTTEEEEE
T ss_pred HHHHHHHHHHhcCCCceEEE
Confidence 34445555666666665543
No 61
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=49.19 E-value=50 Score=24.89 Aligned_cols=46 Identities=22% Similarity=0.208 Sum_probs=33.9
Q ss_pred HhHHHHHHHHHhCCCCceEEEEecCCCE-----------------EEEEec---CCHHHHHHHHHh
Q 032170 35 DGCERKVRNAVSSIRGAKSVEVNRKQSR-----------------VTVTGY---VDPNKVLKKVKS 80 (146)
Q Consensus 35 ~~C~~~i~~~L~~~~GV~~v~vd~~~~~-----------------v~V~~~---~~~~~i~~~i~~ 80 (146)
.+|-.-++..+.+++||.++.+-...+. |.|..+ ++.++|++..-+
T Consensus 9 gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~~ 74 (313)
T 3e0m_A 9 GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYFR 74 (313)
T ss_dssp CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHHh
Confidence 5677778888999999999998765443 455543 788888887643
No 62
>3b1j_C CP12; alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_C*
Probab=45.74 E-value=3.2 Score=19.39 Aligned_cols=11 Identities=36% Similarity=0.546 Sum_probs=8.4
Q ss_pred ccCCccCCCCC
Q 032170 132 TTLFSDENPNA 142 (146)
Q Consensus 132 ~~~fsdeNPna 142 (146)
...|++|||.|
T Consensus 7 lE~yC~enPea 17 (26)
T 3b1j_C 7 FGDYCSENPDA 17 (26)
T ss_dssp HHHHHHHCTTS
T ss_pred HHHHHHHCCCc
Confidence 34688999987
No 63
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=43.56 E-value=40 Score=20.63 Aligned_cols=43 Identities=19% Similarity=0.278 Sum_probs=30.2
Q ss_pred HhHHHHHHHHHhCCCCceEEEEecCCCEEEEE--ecCCHHHHHHHHHh
Q 032170 35 DGCERKVRNAVSSIRGAKSVEVNRKQSRVTVT--GYVDPNKVLKKVKS 80 (146)
Q Consensus 35 ~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~--~~~~~~~i~~~i~~ 80 (146)
..+.- +-+.|-.++||.+|-+. .+=++|+ ...+++.|...|..
T Consensus 36 a~~SP-LA~~LF~i~gVk~Vf~g--~dFITVtK~~~~dW~~ikp~I~~ 80 (94)
T 2k1h_A 36 EGQPE-FINRLFEIEGVKSIFYV--LDFISIDKEDNANWNELLPQIEN 80 (94)
T ss_dssp TTSCH-HHHHHHTSTTEEEEEEE--TTEEEEEECTTCCHHHHHHHHHH
T ss_pred ccCCH-HHHHhhCCCCeeEEEEe--CCEEEEecCCCCCHHHHHHHHHH
Confidence 34443 44456689999987764 7778887 34789988887764
No 64
>1owx_A Lupus LA protein, SS-B, LA; RRM, transcription; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=41.79 E-value=66 Score=20.51 Aligned_cols=56 Identities=16% Similarity=0.083 Sum_probs=42.5
Q ss_pred EEEEE-cCcCH-hHHHHHHHHHhCCCCceEEEEecCCCEEEEEecCCHHHHHHHHHhc
Q 032170 26 VDIKV-KMDCD-GCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKST 81 (146)
Q Consensus 26 ~~l~V-~m~C~-~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~~~~~~i~~~i~~~ 81 (146)
..+.| |+.-. .+...|+..++....|..|++.....+..|.......+..++++++
T Consensus 19 ~il~v~~l~~~~~sredLke~F~~~G~V~~Vd~~~g~~tgfVrf~~~~~~A~~av~~l 76 (121)
T 1owx_A 19 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEKAKEALGKAKDA 76 (121)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEESSCHHHHHHHHHHT
T ss_pred eEEEEecCCCCcCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCChHHHHHHHHHh
Confidence 46778 78777 7889999999998889999888777777787654345556666654
No 65
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=41.70 E-value=62 Score=21.81 Aligned_cols=55 Identities=11% Similarity=0.181 Sum_probs=37.7
Q ss_pred cchhhhhcccccCcC--------CCCCCCceEEEEEEcCcCHhHHHHHHHHHhCCCCceEEEEe
Q 032170 2 GVLDHLFDLFETTPR--------GKKRKPMQTVDIKVKMDCDGCERKVRNAVSSIRGAKSVEVN 57 (146)
Q Consensus 2 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~V~m~C~~C~~~i~~~L~~~~GV~~v~vd 57 (146)
|.|..++++|....- ........++++.+. ....-...+.+.|.++.+|.+|.--
T Consensus 15 GvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~-~d~~~leqI~kqL~Kl~dV~~V~r~ 77 (164)
T 2f1f_A 15 GALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV-GDEKVLEQIEKQLHKLVDVLRVSEL 77 (164)
T ss_dssp THHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE-SCHHHHHHHHHHHHHSTTEEEEEEG
T ss_pred cHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe-ccHHHHHHHHHHHcCCCCEEEEEEc
Confidence 677777777754211 122235667777885 4477888999999999999888654
No 66
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=32.94 E-value=65 Score=22.69 Aligned_cols=46 Identities=17% Similarity=0.190 Sum_probs=33.3
Q ss_pred HhHHHHHHHHHhCCCCceEEEEecCCC---------------EEEEEec---CCHHHHHHHHHh
Q 032170 35 DGCERKVRNAVSSIRGAKSVEVNRKQS---------------RVTVTGY---VDPNKVLKKVKS 80 (146)
Q Consensus 35 ~~C~~~i~~~L~~~~GV~~v~vd~~~~---------------~v~V~~~---~~~~~i~~~i~~ 80 (146)
.+|-.-+|..+.+++||.++.+-...+ .|.|..+ ++.++|++..-+
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~Ff~ 95 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFFQ 95 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHHH
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHHHH
Confidence 467777788899999999999876544 2445543 678888887643
No 67
>3pro_C Alpha-lytic protease; Pro region, foldase, protein folding, serine protease, hydro hydrolase inhibitor complex; HET: AES; 1.80A {Lysobacter enzymogenes} SCOP: d.52.1.1 d.52.1.1 PDB: 2pro_A* 4pro_C
Probab=31.80 E-value=84 Score=21.29 Aligned_cols=35 Identities=20% Similarity=0.155 Sum_probs=25.7
Q ss_pred CCceEEEEecCCCEEEEEec-CCHHHHHHHHHhcCC
Q 032170 49 RGAKSVEVNRKQSRVTVTGY-VDPNKVLKKVKSTGK 83 (146)
Q Consensus 49 ~GV~~v~vd~~~~~v~V~~~-~~~~~i~~~i~~~G~ 83 (146)
.||..+.||..+++|.|+.+ .........++.+|-
T Consensus 114 ~~v~~W~VD~~tN~VVV~a~~~~~~aa~~f~~~AG~ 149 (166)
T 3pro_C 114 DGVQSWYVDPRSNAVVVKVDDGATDAGVDFVALSGA 149 (166)
T ss_dssp TTEEEEEEEGGGTEEEEEEETTCHHHHHHHHHHHTC
T ss_pred CCCceEEEeCCCCeEEEEeCCCChHHHHHHHHHhCC
Confidence 46789999999999999854 344555556666664
No 68
>2w7v_A General secretion pathway protein L; transport, type II secretion, transport protein; 2.30A {Vibrio parahaemolyticus}
Probab=31.64 E-value=90 Score=19.06 Aligned_cols=49 Identities=8% Similarity=0.079 Sum_probs=33.8
Q ss_pred HHHHHHhCCCCce--EEEEecCCCEEEEEe--c--CCHHHHHHHHHhcCCceEEec
Q 032170 40 KVRNAVSSIRGAK--SVEVNRKQSRVTVTG--Y--VDPNKVLKKVKSTGKRAEFWP 89 (146)
Q Consensus 40 ~i~~~L~~~~GV~--~v~vd~~~~~v~V~~--~--~~~~~i~~~i~~~G~~~~~~~ 89 (146)
.+..+|...+++. +++.|-..+.+.+.- . ...+.+...+.+ ||.++.-+
T Consensus 16 ~L~~~l~~vp~l~~~sLryD~~R~ELrlq~~A~dF~~~E~lr~~l~~-gf~Ve~Gs 70 (95)
T 2w7v_A 16 ALPATLGQVKDLEITSFKYDGQRGEVRIHARSSDFQPFEQARVKLAE-KFNVEQGQ 70 (95)
T ss_dssp GHHHHHHTSTTCEEEEEEEETTTTEEEEEEEESSSHHHHHHHHHHHT-TEEEEECC
T ss_pred HHHHHhccCCCceEEEEeecCCCCeEEEEEecCCHHHHHHHHHHhhc-CcEEehhh
Confidence 3556777888865 556666778887762 2 346778888865 99887644
No 69
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=29.81 E-value=86 Score=21.16 Aligned_cols=55 Identities=9% Similarity=0.143 Sum_probs=37.2
Q ss_pred cchhhhhcccccC--------cCCCCCCCceEEEEEEcCcCHhHHHHHHHHHhCCCCceEEEEe
Q 032170 2 GVLDHLFDLFETT--------PRGKKRKPMQTVDIKVKMDCDGCERKVRNAVSSIRGAKSVEVN 57 (146)
Q Consensus 2 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~V~m~C~~C~~~i~~~L~~~~GV~~v~vd 57 (146)
|.|..++++|... ..........++++.|. ....-...+.+.|.++.+|..|.--
T Consensus 16 GvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~-~d~~~leql~kQL~Kl~dV~~V~~~ 78 (165)
T 2pc6_A 16 GALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTN-GPDEIVEQITKQLNKLIEVVKLIDL 78 (165)
T ss_dssp THHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEE-ECHHHHHHHHHHHHHSTTEEEEEEG
T ss_pred cHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEe-ccHHHHHHHHHHhcCCCCEEEEEEc
Confidence 6677777766432 11123345677778884 3477888999999999999888743
No 70
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=29.38 E-value=62 Score=22.43 Aligned_cols=62 Identities=16% Similarity=0.235 Sum_probs=40.8
Q ss_pred EEEEEE-cCcCHhHHHHHHHHHhCCCCceEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEec
Q 032170 25 TVDIKV-KMDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEFWP 89 (146)
Q Consensus 25 ~~~l~V-~m~C~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~~ 89 (146)
..++-| --.|..|+..|-.+|...+||..|-+-...-. . .+.....-++.|+++|..++...
T Consensus 84 g~TlYvTlePC~~Ca~aIi~al~~~~gI~rVV~~~~d~~--~-~~p~~~~g~~~L~~aGI~V~~~~ 146 (190)
T 2nyt_A 84 NVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRLFM--W-EEPEIQAALKKLKEAGCKLRIMK 146 (190)
T ss_pred CeEEEEEcChHHHHHHHHHHhhhhcCCccEEEEEeecCC--c-CChHHHHHHHHHHHCCCEEEEec
Confidence 456667 55799999999999999999976654211000 0 00112356778889998887654
No 71
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=28.98 E-value=60 Score=18.88 Aligned_cols=34 Identities=9% Similarity=-0.010 Sum_probs=21.3
Q ss_pred EEEEEEcCcCHhHH-----HHHHHHHhCCCCceEEEEecC
Q 032170 25 TVDIKVKMDCDGCE-----RKVRNAVSSIRGAKSVEVNRK 59 (146)
Q Consensus 25 ~~~l~V~m~C~~C~-----~~i~~~L~~~~GV~~v~vd~~ 59 (146)
++++-..-.|+.|. .++++.|... ||.-..+|..
T Consensus 3 ~v~ly~~~~C~~c~~~~~~~~ak~~L~~~-~i~~~~~di~ 41 (93)
T 1t1v_A 3 GLRVYSTSVTGSREIKSQQSEVTRILDGK-RIQYQLVDIS 41 (93)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHT-TCCCEEEETT
T ss_pred CEEEEEcCCCCCchhhHHHHHHHHHHHHC-CCceEEEECC
Confidence 34444456799996 7888888764 6654444443
No 72
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=28.70 E-value=1.1e+02 Score=21.18 Aligned_cols=35 Identities=9% Similarity=0.097 Sum_probs=22.6
Q ss_pred CceEEEEEEcCcCHhHHHHHHHHHhCC--CCceEEEEecCCC
Q 032170 22 PMQTVDIKVKMDCDGCERKVRNAVSSI--RGAKSVEVNRKQS 61 (146)
Q Consensus 22 ~~~~~~l~V~m~C~~C~~~i~~~L~~~--~GV~~v~vd~~~~ 61 (146)
.++++.|. .+|-+-+|..+.++ +||.++.+-...+
T Consensus 18 ~~~~a~fa-----gGCFWg~E~~F~~l~g~GV~~t~~GYagG 54 (187)
T 3pim_A 18 KDKLITLA-----CGCFWGTEHMYRKYLNDRIVDCKVGYANG 54 (187)
T ss_dssp TCEEEEEE-----SSCHHHHHHHHHHHHGGGSSEEEEEEEEE
T ss_pred CCcEEEEe-----cCCchhhHHHHHHhcCCCeEEEEeeecCC
Confidence 34555544 45666667777777 8898888765444
No 73
>1kaf_A Transcription regulatory protein MOTA; escherichia coli, X-RAY crystallography, protein-DNA interactions, structural genomics; 1.60A {Enterobacteria phage T4} SCOP: d.199.1.1
Probab=27.61 E-value=1.1e+02 Score=19.21 Aligned_cols=41 Identities=17% Similarity=0.344 Sum_probs=31.9
Q ss_pred CCCceEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEec
Q 032170 48 IRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEFWP 89 (146)
Q Consensus 48 ~~GV~~v~vd~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~~ 89 (146)
..|+..+++. ..+..+|-|.--.+++++.+.+.|..+..-+
T Consensus 43 t~GiRqfEi~-n~G~fRI~gYk~se~~~~~f~slGm~~K~~~ 83 (108)
T 1kaf_A 43 TNGIRNFEIN-NNGNMRIFGYKMMEHHIQKFTDIGMSCKIAK 83 (108)
T ss_dssp ETTEEEEEEC-TTSEEEEEEESCCHHHHHHHHTTTCEEEECT
T ss_pred cCceeEEEEe-cCCcEEEEEecCCHHHHHHHHhcCceEEEcC
Confidence 4688887774 6778888888777889999999997766443
No 74
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=26.92 E-value=51 Score=19.26 Aligned_cols=18 Identities=11% Similarity=0.314 Sum_probs=16.0
Q ss_pred CCHHHHHHHHHhcCCceE
Q 032170 69 VDPNKVLKKVKSTGKRAE 86 (146)
Q Consensus 69 ~~~~~i~~~i~~~G~~~~ 86 (146)
++.+++++.|.+.||.+.
T Consensus 61 id~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 61 TPMDKIVRTLEANGYEVI 78 (81)
T ss_dssp CCHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHcCCEee
Confidence 689999999999999764
No 75
>3qv1_G CP12 protein; rossman fold, calvin cycle, NAD, chloroplast, oxidoreductase binding complex; HET: NAD; 2.00A {Arabidopsis thaliana} PDB: 3rvd_I*
Probab=25.37 E-value=12 Score=22.58 Aligned_cols=16 Identities=19% Similarity=0.526 Sum_probs=12.0
Q ss_pred ccccCCccCCCCC--ccc
Q 032170 130 RLTTLFSDENPNA--CSI 145 (146)
Q Consensus 130 ~~~~~fsdeNPna--CsI 145 (146)
.+...|+||||.+ |.|
T Consensus 62 t~lE~yC~~nPea~ECr~ 79 (82)
T 3qv1_G 62 DPLEEYCKDNPETNECRT 79 (82)
T ss_dssp CHHHHHHHHCTTSTTTCC
T ss_pred ChHHHHHHHCCCchHhhh
Confidence 3456899999987 754
No 76
>4e6k_G BFD, bacterioferritin-associated ferredoxin; protein complex, iron storage, iron binding, iron mobilizati ferritin, iron homeostasis; HET: HEM; 2.00A {Pseudomonas aeruginosa}
Probab=25.15 E-value=32 Score=19.94 Aligned_cols=19 Identities=21% Similarity=0.496 Sum_probs=15.4
Q ss_pred EEcCcCHhHHHHHHHHHhC
Q 032170 29 KVKMDCDGCERKVRNAVSS 47 (146)
Q Consensus 29 ~V~m~C~~C~~~i~~~L~~ 47 (146)
+.++.|.+|...|++.|..
T Consensus 33 ~aGt~CG~C~~~i~~il~~ 51 (73)
T 4e6k_G 33 GVGTQCGKCASLAKQVVRE 51 (73)
T ss_dssp CTTSSSCTTHHHHHHHHHH
T ss_pred CCCCCCCchHHHHHHHHHH
Confidence 3477899999999888864
No 77
>2j58_A WZA, outer membrane lipoprotein WZA; membrane protein; 2.26A {Escherichia coli} PDB: 2w8i_A 2w8h_A*
Probab=23.71 E-value=1.5e+02 Score=22.55 Aligned_cols=56 Identities=18% Similarity=0.370 Sum_probs=40.7
Q ss_pred EEEE-cCcCHhHHHHHHHHHhCC---CCceEEEE-ecCCCEEEEEecC---------C-HHHHHHHHHhcCC
Q 032170 27 DIKV-KMDCDGCERKVRNAVSSI---RGAKSVEV-NRKQSRVTVTGYV---------D-PNKVLKKVKSTGK 83 (146)
Q Consensus 27 ~l~V-~m~C~~C~~~i~~~L~~~---~GV~~v~v-d~~~~~v~V~~~~---------~-~~~i~~~i~~~G~ 83 (146)
.++| |++-..-...|++.|.+. +-| .|.+ ++...++.|.|.+ . ...|.++|..+|.
T Consensus 113 ~v~vaG~T~~e~~~~I~~~L~~~~~~P~V-~V~v~~~~~~~V~V~GeV~~PG~y~l~~~~~tl~~ai~~AGG 183 (359)
T 2j58_A 113 KVQVAGKTVSQVRQDITSRLTTYIESPQV-DVSIAAFRSQKVYVTGEVANSGKQAITNIPLTVMDAINAAGG 183 (359)
T ss_dssp EEECTTCCHHHHHHHHHHHHTTTSSSCCE-EEEEEECCSCEEEEEESBSSCEEEECCSSCCBHHHHHHHTTS
T ss_pred eEEECCCCHHHHHHHHHHHHHHhccCCeE-EEEEccCCceEEEEEceecCCeEEEeCCCCCcHHHHHHHcCC
Confidence 5899 999999999999999864 222 2333 3456688888641 2 4679999998874
No 78
>1pqx_A Conserved hypothetical protein; ZR18,structure, autostructure,spins,autoassign, northeast structural genomics consortium; NMR {Staphylococcus aureus subsp} SCOP: d.267.1.1 PDB: 2ffm_A
Probab=21.74 E-value=50 Score=20.08 Aligned_cols=43 Identities=21% Similarity=0.227 Sum_probs=28.9
Q ss_pred HhHHHHHHHHHhCCCCceEEEEecCCCEEEEE--ecCCHHHHHHHHHh
Q 032170 35 DGCERKVRNAVSSIRGAKSVEVNRKQSRVTVT--GYVDPNKVLKKVKS 80 (146)
Q Consensus 35 ~~C~~~i~~~L~~~~GV~~v~vd~~~~~v~V~--~~~~~~~i~~~i~~ 80 (146)
..+.-.++ .|-.++||.+|-+. .+=++|+ ...+++.|...|..
T Consensus 36 a~~SPLA~-~LF~i~gVk~Vf~g--~dFITVtK~~~~dW~~ikp~V~~ 80 (91)
T 1pqx_A 36 DSQPAFIN-DILKVEGVKSIFHV--MDFISVDKENDANWETVLPKVEA 80 (91)
T ss_dssp SSCCHHHH-HHHHSTTEEEEEEE--TTEEEEEECTTSCSTTTHHHHHH
T ss_pred ccCCHHHH-HhhCCCCeeEEEEe--CCEEEEecCCCCCHHHHHHHHHH
Confidence 34444444 45579999987764 7778887 34778777777754
No 79
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=21.69 E-value=1.4e+02 Score=18.02 Aligned_cols=21 Identities=19% Similarity=0.260 Sum_probs=18.2
Q ss_pred HHHHHHHHHhCCCCceEEEEe
Q 032170 37 CERKVRNAVSSIRGAKSVEVN 57 (146)
Q Consensus 37 C~~~i~~~L~~~~GV~~v~vd 57 (146)
-...++.++++++||.++++.
T Consensus 66 ~tD~lee~i~~~e~VqSvdV~ 86 (91)
T 2yy3_A 66 SFDEVAEKFEEVENVESAEVE 86 (91)
T ss_dssp CHHHHHHHHHHSTTEEEEEEE
T ss_pred ccHHHHHHHhcCCCceEEEEE
Confidence 478899999999999998874
No 80
>2y9j_Y Lipoprotein PRGK, protein PRGK; protein transport, type III secretion, IR1, inner membrane R C24-fold; 6.40A {Salmonella enterica subsp}
Probab=20.12 E-value=84 Score=21.26 Aligned_cols=20 Identities=20% Similarity=0.503 Sum_probs=16.7
Q ss_pred HHHHHHHHhCCCCceEEEEe
Q 032170 38 ERKVRNAVSSIRGAKSVEVN 57 (146)
Q Consensus 38 ~~~i~~~L~~~~GV~~v~vd 57 (146)
...+.+.|..++||.+++|.
T Consensus 90 e~ELartI~~i~gV~~ArVh 109 (170)
T 2y9j_Y 90 EQRLEQSLQTMEGVLSARVH 109 (170)
T ss_dssp HHHHHHHHTTSTTEEEEEEE
T ss_pred HHHHHHHHHcCCCeeEEEEE
Confidence 45678889999999998875
No 81
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=20.01 E-value=1.3e+02 Score=17.99 Aligned_cols=32 Identities=22% Similarity=0.485 Sum_probs=19.7
Q ss_pred EEEEEEcCcCHhHH-------HHHHHHHh-CCCCceEEEE
Q 032170 25 TVDIKVKMDCDGCE-------RKVRNAVS-SIRGAKSVEV 56 (146)
Q Consensus 25 ~~~l~V~m~C~~C~-------~~i~~~L~-~~~GV~~v~v 56 (146)
.+.++..-.|.+|. .-|++.|. .++.|..|..
T Consensus 39 ~V~V~L~GaC~gCpss~~TLk~gIE~~L~~~vPev~~V~~ 78 (88)
T 1xhj_A 39 IVKLQLHGACGTCPSSTITLKAGIERALHEEVPGVIEVEQ 78 (88)
T ss_dssp EEEEEEESSCCSSCHHHHHHHHHHHHHHHHHSTTCCEEEE
T ss_pred EEEEEEeecCCCCcchHHHHHHHHHHHHHHhCCCceEEEe
Confidence 56677745677773 24566665 5677776543
Done!