BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032176
(146 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SVD7|UEV1D_ARATH Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana
GN=UEV1D PE=1 SV=1
Length = 146
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 136/146 (93%), Positives = 140/146 (95%)
Query: 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
Query: 61 HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMED 120
HEGRIYQLKLFCDKDYPEKPP+VRFHSR+NM CVNHETGVV+PKKFGLL NWQREYTMED
Sbjct: 61 HEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMED 120
Query: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 146
IL QLKKEM+ HNRKLVQPPEGT F
Sbjct: 121 ILVQLKKEMSTSHNRKLVQPPEGTCF 146
>sp|Q9SJ44|UEV1C_ARATH Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana
GN=UEV1C PE=1 SV=1
Length = 145
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 136/146 (93%), Positives = 142/146 (97%), Gaps = 1/146 (0%)
Query: 1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
MTLGSG SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1 MTLGSG-SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 59
Query: 61 HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMED 120
HEGRIYQLKLFCDKDYPEKPP+VRFHSRINMTCVNH+TGVV+ KKFG+L NWQR+YTMED
Sbjct: 60 HEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMED 119
Query: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 146
ILTQLKKEMAA HNRKLVQPPEGT+F
Sbjct: 120 ILTQLKKEMAASHNRKLVQPPEGTFF 145
>sp|Q93YP0|UEV1A_ARATH Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana
GN=UEV1A PE=1 SV=1
Length = 158
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 107/141 (75%), Positives = 120/141 (85%)
Query: 3 LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHE 62
+ S + VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DDIYM+SWTGTI+GP NT +E
Sbjct: 1 MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYE 60
Query: 63 GRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDIL 122
G+I+QLKLFC K+YPE PP+VRF +RINM CVN ETGVVEP F +L NW+REYTMEDIL
Sbjct: 61 GKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDIL 120
Query: 123 TQLKKEMAAPHNRKLVQPPEG 143
+LKKEM HNRKL QPPEG
Sbjct: 121 VKLKKEMMTSHNRKLAQPPEG 141
>sp|Q9CAB6|UEV1B_ARATH Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana
GN=UEV1B PE=1 SV=1
Length = 159
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 105/142 (73%), Positives = 118/142 (83%)
Query: 3 LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHE 62
+GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DDI M+SWTGTI+GPHNT +E
Sbjct: 1 MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60
Query: 63 GRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDIL 122
G+I+QLKLFC KDYPE PP+VRF SRINM CVN E GVV+P F +L NW+RE+TMED+L
Sbjct: 61 GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120
Query: 123 TQLKKEMAAPHNRKLVQPPEGT 144
QLKKEM + NRKL QP EG
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEGN 142
>sp|Q54D06|UBE2V_DICDI Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium
discoideum GN=ube2v PE=3 SV=1
Length = 138
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 103/137 (75%)
Query: 10 VVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLK 69
+PRNF LLEELE GEK GDGT+SYG++ DDI + SW GTIIGP NT + R Y LK
Sbjct: 2 TTIPRNFVLLEELESGEKSTGDGTISYGLESPDDILLSSWIGTIIGPQNTPFDNRFYSLK 61
Query: 70 LFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEM 129
L+CDKDYP KPP+VRF ++IN+ CVN + GVV+PK +L NW + +++IL++L++EM
Sbjct: 62 LYCDKDYPNKPPTVRFTTKINIGCVNQQNGVVDPKNLPILSNWTSKNRIQNILSELRREM 121
Query: 130 AAPHNRKLVQPPEGTYF 146
++ N+KLVQPPEG F
Sbjct: 122 SSSSNKKLVQPPEGANF 138
>sp|O74983|MMS2_SCHPO Ubiquitin-conjugating enzyme spm2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=spm2 PE=1 SV=1
Length = 139
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 78/135 (57%), Positives = 100/135 (74%)
Query: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
VPRNF+LLEELE+GEKG+G+ + SYG+ + DDI + W TI+GP ++VHE RIY LK+
Sbjct: 4 VPRNFKLLEELEKGEKGLGESSCSYGLTNADDITLSDWNATILGPAHSVHENRIYSLKIH 63
Query: 72 CDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAA 131
CD +YP+ PP V F SRIN+ V+ ETG V P K L +W+REY+ME +L LKKEMA+
Sbjct: 64 CDANYPDAPPIVTFVSRINLPGVDGETGKVNPHKIDCLRHWKREYSMETVLLDLKKEMAS 123
Query: 132 PHNRKLVQPPEGTYF 146
NRKL QPPEG+ F
Sbjct: 124 SSNRKLPQPPEGSTF 138
>sp|Q9CZY3|UB2V1_MOUSE Ubiquitin-conjugating enzyme E2 variant 1 OS=Mus musculus GN=Ube2v1
PE=1 SV=1
Length = 147
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 74/143 (51%), Positives = 102/143 (71%)
Query: 4 GSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEG 63
+ GS V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T++E
Sbjct: 3 ATTGSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYEN 62
Query: 64 RIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILT 123
RIY LK+ C YPE PPSVRF +R+NM+ V+ GVV+P+ +L WQ ++++ IL
Sbjct: 63 RIYSLKIECGPKYPEAPPSVRFVTRVNMSGVSSSNGVVDPRATAVLAKWQNSHSIKVILQ 122
Query: 124 QLKKEMAAPHNRKLVQPPEGTYF 146
+L++ M + N KL QPPEG +
Sbjct: 123 ELRRLMMSKENMKLPQPPEGQCY 145
>sp|Q13404|UB2V1_HUMAN Ubiquitin-conjugating enzyme E2 variant 1 OS=Homo sapiens GN=UBE2V1
PE=1 SV=2
Length = 147
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 74/143 (51%), Positives = 100/143 (69%)
Query: 4 GSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEG 63
+ GS V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T++E
Sbjct: 3 ATTGSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYEN 62
Query: 64 RIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILT 123
RIY LK+ C YPE PP VRF ++INM VN GVV+P+ +L WQ Y+++ +L
Sbjct: 63 RIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQ 122
Query: 124 QLKKEMAAPHNRKLVQPPEGTYF 146
+L++ M + N KL QPPEG +
Sbjct: 123 ELRRLMMSKENMKLPQPPEGQCY 145
>sp|Q3SZ52|UB2V1_BOVIN Ubiquitin-conjugating enzyme E2 variant 1 OS=Bos taurus GN=UBE2V1
PE=2 SV=1
Length = 147
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 74/143 (51%), Positives = 100/143 (69%)
Query: 4 GSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEG 63
+ GS V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T++E
Sbjct: 3 ATTGSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYEN 62
Query: 64 RIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILT 123
RIY LK+ C YPE PP VRF ++INM VN GVV+P+ +L WQ Y+++ +L
Sbjct: 63 RIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQ 122
Query: 124 QLKKEMAAPHNRKLVQPPEGTYF 146
+L++ M + N KL QPPEG +
Sbjct: 123 ELRRLMMSKENMKLPQPPEGQCY 145
>sp|Q5R4Z6|UB2V1_PONAB Ubiquitin-conjugating enzyme E2 variant 1 OS=Pongo abelii GN=UBE2V1
PE=2 SV=1
Length = 147
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 98/140 (70%)
Query: 7 GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIY 66
GS V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T++E RIY
Sbjct: 6 GSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIY 65
Query: 67 QLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLK 126
LK+ C PE PP VRF ++INM VN GVV+P+ +L WQ Y+++ +L +L+
Sbjct: 66 SLKIECGPKCPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELR 125
Query: 127 KEMAAPHNRKLVQPPEGTYF 146
+ M + N KL QPPEG +
Sbjct: 126 RLMMSKENMKLPQPPEGQCY 145
>sp|Q90879|UB2V1_CHICK Ubiquitin-conjugating enzyme E2 variant 1 OS=Gallus gallus
GN=UBE2V1 PE=2 SV=2
Length = 145
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 99/142 (69%)
Query: 5 SGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGR 64
+ + V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T++E R
Sbjct: 2 AATTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENR 61
Query: 65 IYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQ 124
IY LK+ C YPE PP VRF ++INM VN GVV+P+ +L WQ ++++ +L +
Sbjct: 62 IYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSFSIKVVLQE 121
Query: 125 LKKEMAAPHNRKLVQPPEGTYF 146
L++ M + N KL QPPEG +
Sbjct: 122 LRRLMMSKENMKLPQPPEGQCY 143
>sp|Q5F3Z3|UB2V2_CHICK Ubiquitin-conjugating enzyme E2 variant 2 OS=Gallus gallus
GN=UBE2V2 PE=2 SV=1
Length = 144
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 100/141 (70%)
Query: 6 GGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRI 65
GS+V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T +E RI
Sbjct: 2 AGSTVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRI 61
Query: 66 YQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQL 125
Y LK+ C YPE PP+VRF ++INM +N+ G+V+ + +L WQ Y+++ +L +L
Sbjct: 62 YSLKVECGPKYPEAPPTVRFVTKINMNGINNSNGMVDARSIPVLAKWQNSYSIKVVLQEL 121
Query: 126 KKEMAAPHNRKLVQPPEGTYF 146
++ M + N KL QPPEG +
Sbjct: 122 RRLMMSKENMKLPQPPEGQTY 142
>sp|Q9D2M8|UB2V2_MOUSE Ubiquitin-conjugating enzyme E2 variant 2 OS=Mus musculus GN=Ube2v2
PE=2 SV=4
Length = 145
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 71/139 (51%), Positives = 99/139 (71%)
Query: 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 67
+ V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T +E RIY
Sbjct: 5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYS 64
Query: 68 LKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKK 127
LK+ C YPE PPSVRF ++INM +N+ +G+V+ + +L WQ Y+++ IL +L++
Sbjct: 65 LKVECGSKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVILQELRR 124
Query: 128 EMAAPHNRKLVQPPEGTYF 146
M + N KL QPPEG +
Sbjct: 125 LMMSKENMKLPQPPEGQTY 143
>sp|Q7M767|UB2V2_RAT Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus
GN=Ube2v2 PE=1 SV=3
Length = 145
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 99/139 (71%)
Query: 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 67
+ V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T +E RIY
Sbjct: 5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYS 64
Query: 68 LKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKK 127
LK+ C YPE PPSVRF ++INM +N+ +G+V+ + +L WQ Y+++ +L +L++
Sbjct: 65 LKVECGSKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRR 124
Query: 128 EMAAPHNRKLVQPPEGTYF 146
M + N KL QPPEG +
Sbjct: 125 LMMSKENMKLPQPPEGQTY 143
>sp|P53152|MMS2_YEAST Ubiquitin-conjugating enzyme variant MMS2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MMS2 PE=1
SV=1
Length = 137
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/135 (56%), Positives = 93/135 (68%), Gaps = 1/135 (0%)
Query: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
VPRNFRLLEELE+GEKG G + SYG+ D DDI M W GTI+GP ++ HE RIY L +
Sbjct: 4 VPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSID 63
Query: 72 CDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAA 131
C +YP+ PP V F S+IN+ CVN TG V+ F L +W+R YTME +L L+KEMA
Sbjct: 64 CGPNYPDSPPKVTFISKINLPCVNPTTGEVQ-TDFHTLRDWKRAYTMETLLLDLRKEMAT 122
Query: 132 PHNRKLVQPPEGTYF 146
P N+KL QP EG F
Sbjct: 123 PANKKLRQPKEGETF 137
>sp|Q5R6C9|UB2V2_PONAB Ubiquitin-conjugating enzyme E2 variant 2 OS=Pongo abelii GN=UBE2V2
PE=2 SV=1
Length = 145
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 99/139 (71%)
Query: 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 67
+ V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T +E RIY
Sbjct: 5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYS 64
Query: 68 LKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKK 127
LK+ C YPE PPSVRF ++INM +N+ +G+V+ + +L WQ Y+++ +L +L++
Sbjct: 65 LKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRR 124
Query: 128 EMAAPHNRKLVQPPEGTYF 146
M + N KL QPPEG +
Sbjct: 125 LMMSKENMKLPQPPEGQTY 143
>sp|Q15819|UB2V2_HUMAN Ubiquitin-conjugating enzyme E2 variant 2 OS=Homo sapiens GN=UBE2V2
PE=1 SV=4
Length = 145
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 99/139 (71%)
Query: 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 67
+ V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T +E RIY
Sbjct: 5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYS 64
Query: 68 LKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKK 127
LK+ C YPE PPSVRF ++INM +N+ +G+V+ + +L WQ Y+++ +L +L++
Sbjct: 65 LKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRR 124
Query: 128 EMAAPHNRKLVQPPEGTYF 146
M + N KL QPPEG +
Sbjct: 125 LMMSKENMKLPQPPEGQTY 143
>sp|Q3SZ43|UB2V2_BOVIN Ubiquitin-conjugating enzyme E2 variant 2 OS=Bos taurus GN=UBE2V2
PE=2 SV=3
Length = 145
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 99/139 (71%)
Query: 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 67
+ V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T +E RIY
Sbjct: 5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYS 64
Query: 68 LKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKK 127
LK+ C YPE PPSVRF ++INM +N+ +G+V+ + +L WQ Y+++ +L +L++
Sbjct: 65 LKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRR 124
Query: 128 EMAAPHNRKLVQPPEGTYF 146
M + N KL QPPEG +
Sbjct: 125 LMMSKENMKLPQPPEGQTY 143
>sp|Q6PEH5|UB2V2_DANRE Ubiquitin-conjugating enzyme E2 variant 2 OS=Danio rerio GN=ube2v2
PE=2 SV=1
Length = 145
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 99/142 (69%)
Query: 5 SGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGR 64
+ S V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T +E R
Sbjct: 2 AASSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPARTNYENR 61
Query: 65 IYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQ 124
IY LK+ C YPE PP+VRF ++I+M +N+ G+V+ + +L WQ Y+++ +L +
Sbjct: 62 IYSLKVECGPKYPEVPPTVRFVTKISMNGINNSNGMVDARSIPILAKWQNSYSIKVVLQE 121
Query: 125 LKKEMAAPHNRKLVQPPEGTYF 146
L++ M + N KL QPPEG +
Sbjct: 122 LRRLMMSKENMKLPQPPEGQTY 143
>sp|Q7ZYP0|UB2V2_XENLA Ubiquitin-conjugating enzyme E2 variant 2 OS=Xenopus laevis
GN=ube2v2 PE=2 SV=1
Length = 145
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 97/139 (69%)
Query: 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 67
+ + VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ + WTG IIGP T +E RIY
Sbjct: 5 AGIKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYS 64
Query: 68 LKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKK 127
L+L C YPE PP+VRF +++NM +N+ G V+ + +L WQ ++++ +L +L++
Sbjct: 65 LRLECGPKYPEAPPTVRFVTKMNMNGINNSNGTVDYRSIPVLAKWQNSFSIKVLLQELRR 124
Query: 128 EMAAPHNRKLVQPPEGTYF 146
M + N KL QPPEG +
Sbjct: 125 LMMSKENMKLPQPPEGQTY 143
>sp|Q8LGF7|PEX4_ARATH Protein PEROXIN-4 OS=Arabidopsis thaliana GN=PEX4 PE=1 SV=1
Length = 157
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCD 73
R F+ +E++R + + D + DD + + WT I GP T +EG ++QL
Sbjct: 7 RLFKEYKEVQR--EKVADPDIQLICDDTN---IFKWTALIKGPSETPYEGGVFQLAFSVP 61
Query: 74 KDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN-WQREYTMEDILTQLKKEMAAP 132
+ YP +PP VRF ++I V+ +TG + +L N W +T++ + + MA P
Sbjct: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEI---CLDILKNAWSPAWTLQSVCRAIIALMAHP 118
>sp|P25153|UBCD6_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=UbcD6 PE=2 SV=2
Length = 151
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Query: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
P RL+ + +R ++ G D+ I W I GPH+T E ++L +
Sbjct: 3 TPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMI----WNAVIFGPHDTPFEDGTFKLTIE 58
Query: 72 CDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN-WQREYTMEDILTQLKKEMA 130
++YP KPP+VRF S++ V + G+ +L N W Y + ILT ++ ++
Sbjct: 59 FTEEYPNKPPTVRFVSKVFHPNVYADGGIC----LDILQNRWSPTYDVSAILTSIQSLLS 114
Query: 131 APH 133
P+
Sbjct: 115 DPN 117
>sp|Q6BU36|UBC2_DEBHA Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=UBC2 PE=3 SV=1
Length = 168
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Query: 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFC 72
P RL+ + +R ++ G + + D + SW IIGP +T E ++L L
Sbjct: 4 PAKRRLMRDFKRMQQDAPSGVSASPLPDN----VMSWNAVIIGPADTPFEDGTFRLILQF 59
Query: 73 DKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN-WQREYTMEDILTQLKKEMAA 131
D+ YP KPPSV+F S + V + +G + +L N W Y + ILT ++ +
Sbjct: 60 DEQYPNKPPSVKFISEMFHPNV-YASGEL---CLDILQNRWSPTYDVSSILTSIQSLLND 115
Query: 132 PH 133
P+
Sbjct: 116 PN 117
>sp|P52482|UB2E1_MOUSE Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2
SV=1
Length = 193
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 13/125 (10%)
Query: 8 SSVVVPRNFRLLE-ELERGEKGIGDGTV-----SYGMDDGDDIYMRSWTGTIIGPHNTVH 61
S V + +N +LL +R +K + D T+ GD+IY W TI+GP +V+
Sbjct: 34 SKVSMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIY--EWRSTILGPPGSVY 91
Query: 62 EGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLV-NWQREYTMED 120
EG ++ L + +YP KPP V F +RI +N + GV+ +L NW T+
Sbjct: 92 EGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQ-GVI---CLDILKDNWSPALTISK 147
Query: 121 ILTQL 125
+L +
Sbjct: 148 VLLSI 152
>sp|Q95044|UBE2C_SPISO Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C
PE=1 SV=1
Length = 177
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 17/123 (13%)
Query: 17 RLLEELE----RGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFC 72
RL +EL G+ GI DGD+++ W T+ GP +TV+E Y+L L
Sbjct: 34 RLQQELRTLLMSGDPGIT------AFPDGDNLF--KWVATLDGPKDTVYESLKYKLTLEF 85
Query: 73 DKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLV-NWQREYTMEDILTQLKKEMAA 131
DYP KPP V+F + V+ + +L NW Y + IL L+ +
Sbjct: 86 PSDYPYKPPVVKFTTPCWHPNVDQSGNIC----LDILKENWTASYDVRTILLSLQSLLGE 141
Query: 132 PHN 134
P+N
Sbjct: 142 PNN 144
>sp|P51965|UB2E1_HUMAN Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1
SV=1
Length = 193
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 13/125 (10%)
Query: 8 SSVVVPRNFRLLE-ELERGEKGIGDGTV-----SYGMDDGDDIYMRSWTGTIIGPHNTVH 61
S V + +N +LL +R +K + D T+ GD+IY W TI+GP +V+
Sbjct: 34 SKVSMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIY--EWRSTILGPPGSVY 91
Query: 62 EGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLV-NWQREYTMED 120
EG ++ L + +YP KPP V F +RI +N + GV+ +L NW T+
Sbjct: 92 EGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQ-GVI---CLDILKDNWSPALTISK 147
Query: 121 ILTQL 125
+L +
Sbjct: 148 VLLSI 152
>sp|Q96LR5|UB2E2_HUMAN Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1
SV=1
Length = 201
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 100
GD+IY W TI+GP +V+EG ++ L + DYP KPP V F +RI +N + GV
Sbjct: 81 GDNIY--EWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQ-GV 137
Query: 101 VEPKKFGLLV-NWQREYTMEDILTQL 125
+ +L NW T+ +L +
Sbjct: 138 I---CLDILKDNWSPALTISKVLLSI 160
>sp|P52483|UB2E3_MOUSE Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1
SV=2
Length = 207
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 100
GD+IY W TI+GP +V+EG ++ L + DYP KPP V F +RI +N + GV
Sbjct: 87 GDNIY--EWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQ-GV 143
Query: 101 VEPKKFGLLV-NWQREYTMEDILTQL 125
+ +L NW T+ +L +
Sbjct: 144 I---CLDILKDNWSPALTISKVLLSI 166
>sp|Q969T4|UB2E3_HUMAN Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1
SV=1
Length = 207
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 100
GD+IY W TI+GP +V+EG ++ L + DYP KPP V F +RI +N + GV
Sbjct: 87 GDNIY--EWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQ-GV 143
Query: 101 VEPKKFGLLV-NWQREYTMEDILTQL 125
+ +L NW T+ +L +
Sbjct: 144 I---CLDILKDNWSPALTISKVLLSI 166
>sp|Q2T9X7|UB2E3_BOVIN Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2
SV=1
Length = 207
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 100
GD+IY W TI+GP +V+EG ++ L + DYP KPP V F +RI +N + GV
Sbjct: 87 GDNIY--EWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQ-GV 143
Query: 101 VEPKKFGLLV-NWQREYTMEDILTQL 125
+ +L NW T+ +L +
Sbjct: 144 I---CLDILKDNWSPALTISKVLLSI 166
>sp|Q91W82|UB2E2_MOUSE Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2
SV=1
Length = 201
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 100
GD+IY W TI+GP +V+EG ++ L + DYP KPP V F +RI +N + GV
Sbjct: 81 GDNIY--EWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQ-GV 137
Query: 101 VEPKKFGLLV-NWQREYTMEDILTQL 125
+ +L NW T+ +L +
Sbjct: 138 I---CLDILKDNWSPALTISKVLLSI 160
>sp|P25865|UBC1_ARATH Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1
PE=1 SV=1
Length = 152
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Query: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
P RL+ + +R ++ G D+ + W I GP +T +G ++L L
Sbjct: 3 TPARKRLMRDFKRLQQDPPAGISGAPQDNN----IMLWNAVIFGPDDTPWDGGTFKLSLQ 58
Query: 72 CDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN-WQREYTMEDILTQLKKEMA 130
+DYP KPP+VRF SR+ + + + +L N W Y + ILT ++ +
Sbjct: 59 FSEDYPNKPPTVRFVSRMFHPNIYADGSIC----LDILQNQWSPIYDVAAILTSIQSLLC 114
Query: 131 APH 133
P+
Sbjct: 115 DPN 117
>sp|P42745|UBC2_ARATH Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2
PE=2 SV=1
Length = 152
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Query: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
P RL+ + +R ++ G D+ + W I GP +T +G ++L L
Sbjct: 3 TPARKRLMRDFKRLQQDPPAGISGAPQDNN----IMLWNAVIFGPDDTPWDGGTFKLSLQ 58
Query: 72 CDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN-WQREYTMEDILTQLKKEMA 130
+DYP KPP+VRF SR+ + + + +L N W Y + ILT ++ +
Sbjct: 59 FSEDYPNKPPTVRFVSRMFHPNIYADGSIC----LDILQNQWSPIYDVAAILTSIQSLLC 114
Query: 131 APH 133
P+
Sbjct: 115 DPN 117
>sp|Q54XS6|UBE2C_DICDI Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium
discoideum GN=ube2c PE=3 SV=1
Length = 153
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 17 RLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDY 76
RL EL G G ++ DGD+I+ +W GTI G +TV+E +++ L DY
Sbjct: 10 RLQSELMNLMMGPSPGISAFP--DGDNIF--NWIGTIQGAKDTVYEQMEFKMSLKFPTDY 65
Query: 77 PEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN-WQREYTMEDILTQLKKEMAAPHN 134
P KPP+V+F ++ V++ + +L + W Y + +L ++ + P+N
Sbjct: 66 PYKPPTVKFETQCFHPNVDNNGNIC----LDILKDKWSPVYNVRSLLISIQSLLGEPNN 120
>sp|P52485|UBCD2_DROME Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster
GN=UbcD2 PE=2 SV=1
Length = 232
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 100
GD++Y W TI+GP +V+EG ++ L + +YP KPP V F +RI +N + GV
Sbjct: 112 GDNLY--EWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQ-GV 168
Query: 101 VEPKKFGLLV-NWQREYTMEDILTQL 125
+ +L NW T+ +L +
Sbjct: 169 I---CLDILKDNWSPALTISKVLLSI 191
>sp|P35130|UBC2_MEDSA Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2
SV=1
Length = 152
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
P RL+ + +R + G D+ + W I GP +T +G ++L L
Sbjct: 3 TPARKRLMRDFKRLQHDPPAGISGAPQDNN----IMLWNAVIFGPDDTPWDGGTFKLSLQ 58
Query: 72 CDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN-WQREYTMEDILTQLKKEMA 130
+DYP KPP+VRF SR+ + + + +L N W Y + ILT ++ +
Sbjct: 59 FSEDYPNKPPTVRFVSRMFHPNIYADGSIC----LDILQNQWSPIYDVAAILTSIQSLLC 114
Query: 131 APH 133
P+
Sbjct: 115 DPN 117
>sp|P25866|UBC2_WHEAT Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1
SV=1
Length = 152
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Query: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
P RL+ + +R ++ G D+ + W I GP +T +G ++L L
Sbjct: 3 TPARKRLMRDFKRLQQDPPAGISGAPHDNN----ITLWNAVIFGPDDTPWDGGTFKLTLQ 58
Query: 72 CDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN-WQREYTMEDILTQLKKEMA 130
+DYP KPP+VRF SR+ + + + +L N W Y + ILT ++ +
Sbjct: 59 FTEDYPNKPPTVRFVSRMFHPNIYADGSIC----LDILQNQWSPIYDVAAILTSIQSLLC 114
Query: 131 APH 133
P+
Sbjct: 115 DPN 117
>sp|Q9VTY6|UBE2C_DROME Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih
PE=1 SV=1
Length = 178
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 18 LLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYP 77
L+ + E+GI DG++I+ W GTI GP NTV+ G+ Y+L L YP
Sbjct: 41 LMNLMMANERGIS------AFPDGENIF--KWVGTIAGPRNTVYSGQTYRLSLDFPNSYP 92
Query: 78 EKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN-WQREYTMEDILTQLKKEMAAPHN 134
P V+F + +C + + +L + W Y + IL ++ + P+N
Sbjct: 93 YAAPVVKFLT----SCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNN 146
>sp|P42746|UBC3_ARATH Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3
PE=2 SV=1
Length = 150
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 9/125 (7%)
Query: 10 VVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLK 69
+ P RL+ + +R +K G D+ + W I GP +T +G ++L
Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNN----IMHWNALIFGPEDTPWDGGTFKLT 56
Query: 70 LFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN-WQREYTMEDILTQLKKE 128
L +DYP KPP VRF SR+ + + + +L N W Y + +LT ++
Sbjct: 57 LHFTEDYPNKPPIVRFVSRMFHPNIYADGSIC----LDILQNQWSPIYDVAAVLTSIQSL 112
Query: 129 MAAPH 133
+ P+
Sbjct: 113 LCDPN 117
>sp|P52492|UBC11_YEAST Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC11 PE=1 SV=1
Length = 156
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 6/119 (5%)
Query: 17 RLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDY 76
RL EL + + ++ +DD D Y W G I GP +T + G +++ L ++Y
Sbjct: 12 RLQNELLQLLSSTTESISAFPVDDNDLTY---WVGYITGPKDTPYSGLKFKVSLKFPQNY 68
Query: 77 PEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNR 135
P PP ++F S + V+ + L W Y +E IL L+ + P+NR
Sbjct: 69 PFHPPMIKFLSPMWHPNVDKSGNICLDI---LKEKWSAVYNVETILLSLQSLLGEPNNR 124
>sp|P34477|UBC7_CAEEL Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis
elegans GN=ubc-7 PE=1 SV=1
Length = 164
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 35 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCV 94
S G+ D +DIY W +IGP +T++EG ++ L +DYP+KPP ++F S I +
Sbjct: 24 SAGLVDDNDIY--KWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNI 81
Query: 95 NHETGV 100
+ E V
Sbjct: 82 DKEGNV 87
>sp|Q6FR76|UBC2_CANGA Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=UBC2 PE=3 SV=1
Length = 167
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
P RL+ + +R ++ G + + D + W IIGP +T +E ++L L
Sbjct: 3 TPARRRLMRDFKRMKEDSPPGVSASPLPDN----VMVWNAMIIGPADTPYEDGTFRLLLE 58
Query: 72 CDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN-WQREYTMEDILTQLKKEMA 130
D+DYP KPP V+F S + V + +L N W Y + ILT ++
Sbjct: 59 FDEDYPNKPPHVKFLSEMFHPNVYANGEIC----LDILQNRWTPTYDVASILTSIQSLFN 114
Query: 131 APH 133
P+
Sbjct: 115 DPN 117
>sp|O74201|UBC2_CANAL Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=UBC2 PE=2 SV=1
Length = 179
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Query: 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFC 72
P RL+ + +R ++ G + + D + W IIGP +T E ++L L
Sbjct: 4 PARRRLMRDFKRMQQDPPSGVSASPLPDN----VMKWNAVIIGPSDTPFEDGTFRLLLSF 59
Query: 73 DKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN-WQREYTMEDILTQLKKEMAA 131
D+ YP KPP V+F S + V + +G + +L N W Y + ILT ++ +
Sbjct: 60 DEQYPNKPPQVKFISEMFHPNV-YASGEL---CLDILQNRWSPTYDVSSILTSVQSLLND 115
Query: 132 PH 133
P+
Sbjct: 116 PN 117
>sp|Q8L7T3|UBC20_ARATH Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana GN=UBC20
PE=2 SV=1
Length = 180
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 42 DDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVV 101
D+I+ W GTI G +TV EG Y+L L DYP KPP V+F + C + V
Sbjct: 62 DNIFC--WKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFET----CCFHPNVDVY 115
Query: 102 EPKKFGLLVN-WQREYTMEDILTQLKKEMAAPH 133
+L + W Y + IL ++ + P+
Sbjct: 116 GNICLDILQDKWSSAYDVRTILLSIQSLLGEPN 148
>sp|Q9LJD7|COP10_ARATH Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana
GN=COP10 PE=1 SV=1
Length = 182
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 89
GD++Y W TIIGP T +EG I+ L + DYP KPP + F +RI
Sbjct: 62 GDNLY--HWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRI 108
>sp|P06104|UBC2_YEAST Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RAD6 PE=1 SV=1
Length = 172
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
P RL+ + +R ++ G + + D + W IIGP +T +E ++L L
Sbjct: 3 TPARRRLMRDFKRMKEDAPPGVSASPLPDN----VMVWNAMIIGPADTPYEDGTFRLLLE 58
Query: 72 CDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN-WQREYTMEDILTQLKKEMA 130
D++YP KPP V+F S + V + +L N W Y + ILT ++
Sbjct: 59 FDEEYPNKPPHVKFLSEMFHPNVYANGEIC----LDILQNRWTPTYDVASILTSIQSLFN 114
Query: 131 APH 133
P+
Sbjct: 115 DPN 117
>sp|Q75EB8|UBC2_ASHGO Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=UBC2
PE=3 SV=1
Length = 170
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 9/122 (7%)
Query: 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFC 72
P RL+ + +R ++ G + + D + W IIGP +T +E ++L L
Sbjct: 4 PARRRLMRDFKRMKEDAPPGVSASPLPDN----VMVWNAMIIGPADTPYEDGTFRLLLEF 59
Query: 73 DKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN-WQREYTMEDILTQLKKEMAA 131
D++YP KPP V+F S + V + +L N W Y + ILT ++
Sbjct: 60 DEEYPNKPPHVKFLSEMFHPNVYANGEIC----LDILQNRWTPTYDVASILTSIQSLFND 115
Query: 132 PH 133
P+
Sbjct: 116 PN 117
>sp|Q3ZCF7|UB2D3_BOVIN Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2
SV=1
Length = 147
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 100
GDD++ W TI+GP+++ ++G ++ L + DYP KPP V F +RI +N +
Sbjct: 27 GDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNDSI 84
Query: 101 VEPKKFGLLVNWQREYTMEDILTQLKKEMAAPH 133
L W T+ +L + + P+
Sbjct: 85 CLDI---LRSQWSPALTISKVLLSICSLLCDPN 114
>sp|Q6CUD9|UBC2_KLULA Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=UBC2 PE=3 SV=1
Length = 164
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
P RL+ + +R ++ G + + D I W IIGP +T +E ++L L
Sbjct: 3 TPARRRLMRDFKRMKEDSPPGVSASPLPDNVMI----WNAMIIGPADTPYEDGTFRLLLE 58
Query: 72 CDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVN-WQREYTMEDILTQLKKEMA 130
D++YP KPP V+F S + V + +L N W Y + ILT ++
Sbjct: 59 FDEEYPNKPPHVKFLSEMFHPNVYANGEIC----LDILQNRWTPTYDVASILTSIQSLFN 114
Query: 131 APH 133
P+
Sbjct: 115 DPN 117
>sp|P61078|UB2D3_RAT Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3
PE=2 SV=1
Length = 147
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 100
GDD++ W TI+GP+++ ++G ++ L + DYP KPP V F +RI +N +
Sbjct: 27 GDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Query: 101 VEPKKFGLLVNWQREYTMEDILTQLKKEMAAPH 133
L W T+ +L + + P+
Sbjct: 85 CLDI---LRSQWSPALTISKVLLSICSLLCDPN 114
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.139 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,244,800
Number of Sequences: 539616
Number of extensions: 2821832
Number of successful extensions: 5672
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 5419
Number of HSP's gapped (non-prelim): 262
length of query: 146
length of database: 191,569,459
effective HSP length: 106
effective length of query: 40
effective length of database: 134,370,163
effective search space: 5374806520
effective search space used: 5374806520
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)