Query 032176
Match_columns 146
No_of_seqs 125 out of 1146
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 17:11:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032176.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032176hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a4d_A Ubiquitin-conjugating e 100.0 2.1E-45 7.2E-50 268.3 15.2 138 8-145 20-158 (160)
2 2q0v_A Ubiquitin-conjugating e 100.0 7.7E-45 2.6E-49 264.5 16.0 135 7-146 15-153 (156)
3 1jat_B Ubiquitin-conjugating e 100.0 2.1E-45 7E-50 262.7 12.4 131 12-146 5-138 (138)
4 2awf_A Ubiquitin-conjugating e 100.0 1.2E-44 4.2E-49 267.2 15.8 132 11-146 15-157 (172)
5 2hlw_A Ubiquitin-conjugating e 100.0 8.7E-45 3E-49 267.5 12.6 137 8-144 30-167 (170)
6 1zdn_A Ubiquitin-conjugating e 100.0 5.5E-45 1.9E-49 265.8 9.9 134 6-146 6-139 (158)
7 2ucz_A UBC7, ubiquitin conjuga 100.0 1E-44 3.5E-49 266.0 11.1 130 13-146 4-144 (165)
8 1fxt_A Ubiquitin-conjugating e 100.0 4E-45 1.4E-49 264.2 8.8 128 14-146 2-129 (149)
9 3rz3_A Ubiquitin-conjugating e 100.0 2.1E-44 7.1E-49 268.4 12.4 130 13-146 7-147 (183)
10 3h8k_A Ubiquitin-conjugating e 100.0 2.2E-44 7.5E-49 264.0 12.3 129 14-146 4-143 (164)
11 2e2c_A Ubiquitin conjugating e 100.0 3.2E-44 1.1E-48 261.3 12.9 127 13-146 9-135 (156)
12 2ayv_A Ubiquitin-conjugating e 100.0 2.5E-44 8.5E-49 264.2 12.2 129 11-146 19-147 (166)
13 4gpr_A Ubiquitin-conjugating e 100.0 2.8E-44 9.7E-49 260.3 11.9 127 13-146 4-130 (151)
14 1jat_A Ubiquitin-conjugating e 100.0 4.6E-44 1.6E-48 260.2 12.7 125 15-146 7-131 (155)
15 2c2v_B Ubiquitin-conjugating e 100.0 2E-44 6.8E-49 261.9 10.2 125 15-146 7-131 (154)
16 3rcz_B SUMO-conjugating enzyme 100.0 3.1E-44 1E-48 263.1 11.2 128 15-146 12-143 (163)
17 2r0j_A Ubiquitin carrier prote 100.0 4E-44 1.4E-48 258.9 11.3 125 15-146 3-127 (149)
18 2c4o_A Ubiquitin-conjugating e 100.0 6.4E-44 2.2E-48 261.8 12.1 128 12-146 18-145 (165)
19 1ayz_A UBC2, ubiquitin-conjuga 100.0 4.1E-44 1.4E-48 263.8 10.9 127 13-146 4-130 (169)
20 1z2u_A Ubiquitin-conjugating e 100.0 4.7E-44 1.6E-48 258.8 10.8 126 14-146 5-130 (150)
21 1i7k_A Ubiquitin-conjugating e 100.0 4.3E-44 1.5E-48 265.7 10.7 129 11-146 28-156 (179)
22 1yh2_A HSPC150 protein similar 100.0 9.1E-44 3.1E-48 261.9 11.8 129 13-146 4-134 (169)
23 2aak_A UBC1, ubiquitin conjuga 100.0 7.8E-44 2.7E-48 258.2 10.9 127 13-146 4-130 (152)
24 1yrv_A Ubiquitin-conjugating l 100.0 3.9E-44 1.3E-48 263.9 9.3 135 8-146 18-152 (169)
25 3fn1_B NEDD8-conjugating enzym 100.0 6.7E-44 2.3E-48 262.1 10.6 137 5-146 6-147 (167)
26 2f4z_A Tgtwinscan_2721 - E2 do 100.0 9E-44 3.1E-48 266.7 10.5 129 12-146 31-172 (193)
27 2bep_A Ubiquitin-conjugating e 100.0 2.7E-43 9.2E-48 257.1 11.3 128 13-146 8-138 (159)
28 2grr_A Ubiquitin-conjugating e 100.0 1.9E-43 6.6E-48 258.3 10.3 131 12-146 6-140 (161)
29 2gjd_A Ubiquitin-conjugating e 100.0 1.8E-43 6.2E-48 257.5 10.0 129 14-146 5-137 (157)
30 2pwq_A Ubiquitin conjugating e 100.0 1.2E-43 4.2E-48 270.0 9.1 129 12-146 22-150 (216)
31 1tte_A Ubiquitin-conjugating e 100.0 6E-44 2.1E-48 271.5 6.4 129 13-146 2-130 (215)
32 1wzv_A Ubiquitin-conjugating e 100.0 5.1E-43 1.7E-47 254.6 9.9 127 14-146 5-131 (155)
33 2y9m_A Ubiquitin-conjugating e 100.0 1E-42 3.5E-47 257.0 11.6 131 13-146 6-147 (172)
34 3bzh_A Ubiquitin-conjugating e 100.0 1.2E-42 4E-47 260.9 11.9 127 13-146 48-174 (194)
35 2nvu_C NEDD8-conjugating enzym 100.0 8.4E-43 2.9E-47 259.1 10.7 127 11-146 24-150 (180)
36 3k9o_A Ubiquitin-conjugating e 100.0 1.1E-42 3.7E-47 262.5 11.3 127 14-146 6-135 (201)
37 1y8x_A Ubiquitin-conjugating e 100.0 1.1E-42 3.6E-47 254.2 10.8 125 13-146 6-130 (160)
38 1c4z_D UBCH7, ubiquitin conjug 100.0 1E-42 3.5E-47 252.7 8.0 127 14-146 3-129 (154)
39 3e46_A Ubiquitin-conjugating e 100.0 7.7E-42 2.6E-46 265.3 11.5 130 11-146 55-187 (253)
40 2fo3_A Ubiquitin-conjugating e 100.0 5.1E-41 1.7E-45 236.3 14.1 117 14-137 7-124 (125)
41 2h2y_A Ubiquitin-conjugating e 100.0 3.6E-40 1.2E-44 235.0 16.4 116 13-135 20-136 (136)
42 2onu_A Ubiquitin-conjugating e 100.0 1.8E-42 6E-47 251.1 3.1 123 15-146 4-127 (152)
43 1yf9_A Ubiquitin carrier prote 100.0 4E-42 1.4E-46 253.5 4.9 125 12-146 11-136 (171)
44 3o2u_A NEDD8-conjugating enzym 100.0 5.3E-41 1.8E-45 251.3 10.2 129 11-146 27-159 (190)
45 2z5d_A Ubiquitin-conjugating e 100.0 1.1E-41 3.8E-46 252.6 4.6 123 14-146 26-149 (179)
46 4ddg_A Ubiquitin-conjugating e 100.0 1.3E-39 4.4E-44 267.4 10.6 126 14-146 4-129 (399)
47 2a7l_A Hypothetical ubiquitin- 100.0 9E-39 3.1E-43 227.7 13.5 110 15-130 24-136 (136)
48 4ds2_A Ubiquitin-conjugating e 100.0 7.9E-40 2.7E-44 240.5 6.5 127 13-146 8-151 (167)
49 2f4w_A Ubiquitin-conjugating e 100.0 2.7E-36 9.4E-41 225.2 14.0 120 9-135 10-130 (187)
50 3ceg_A Baculoviral IAP repeat- 100.0 2.1E-36 7.2E-41 241.1 13.2 129 10-142 73-217 (323)
51 1zuo_A Hypothetical protein LO 100.0 3.4E-36 1.2E-40 224.5 8.9 122 11-138 25-162 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 4.1E-27 1.4E-31 170.7 1.0 97 15-123 34-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 3.1E-19 1.1E-23 129.9 9.8 115 16-136 31-161 (162)
54 3kpa_A Probable ubiquitin fold 99.7 8.4E-19 2.9E-23 124.7 0.6 92 15-122 36-145 (168)
55 3obq_A Tumor susceptibility ge 99.5 1.1E-13 3.8E-18 99.0 10.7 77 46-131 53-138 (146)
56 2ebm_A RWD domain-containing p 96.6 0.021 7.1E-07 38.8 9.2 67 15-87 12-78 (128)
57 2day_A Ring finger protein 25; 95.8 0.094 3.2E-06 35.4 9.1 107 17-132 12-125 (128)
58 1ukx_A GCN2, GCN2 EIF2alpha ki 94.7 0.29 1E-05 33.2 8.9 116 4-131 1-128 (137)
59 3zqs_A E3 ubiquitin-protein li 94.2 0.61 2.1E-05 34.0 10.0 83 17-130 5-87 (186)
60 2yz0_A Serine/threonine-protei 93.8 0.19 6.4E-06 34.4 6.4 66 17-88 14-86 (138)
61 2ebk_A RWD domain-containing p 91.5 0.33 1.1E-05 32.7 5.0 67 17-87 11-79 (128)
62 2daw_A RWD domain containing p 88.9 0.47 1.6E-05 33.2 4.1 24 65-88 76-99 (154)
63 2dax_A Protein C21ORF6; RWD do 88.4 0.34 1.2E-05 33.7 3.1 24 65-88 74-97 (152)
64 3u3c_B Paxillin LD2 peptide; 4 64.3 5.3 0.00018 19.0 2.1 20 13-32 5-24 (26)
65 3g9r_A Fusion complex of HIV-1 53.4 8.6 0.00029 20.7 1.9 16 12-27 27-42 (42)
66 2diq_A Tudor and KH domain-con 42.2 65 0.0022 20.5 6.8 25 4-28 1-25 (110)
67 2bum_A Protocatechuate 3,4-dio 36.2 31 0.0011 25.2 3.4 26 62-87 109-139 (209)
68 2rf4_B DNA-directed RNA polyme 24.2 34 0.0012 21.6 1.5 15 11-25 60-74 (87)
69 2bum_B Protocatechuate 3,4-dio 22.7 47 0.0016 24.9 2.3 25 63-87 135-166 (241)
70 2xsu_A Catechol 1,2 dioxygenas 22.5 47 0.0016 25.9 2.4 24 63-86 188-229 (312)
71 4dac_A Computationally designe 22.4 65 0.0022 15.4 2.0 13 15-27 10-22 (28)
72 3qrl_A Transcription initiatio 22.1 1.9E+02 0.0067 19.7 6.1 41 46-88 32-75 (140)
73 3rls_A YAF9, protein AF-9 homo 21.6 2.2E+02 0.0076 20.2 6.2 38 46-85 32-69 (175)
74 2azq_A Catechol 1,2-dioxygenas 21.4 52 0.0018 25.7 2.4 24 63-86 184-225 (311)
75 3t63_M 3,4-PCD, protocatechuat 21.0 53 0.0018 24.6 2.3 24 63-86 134-164 (238)
76 1tmx_A Hydroxyquinol 1,2-dioxy 20.9 54 0.0018 25.3 2.4 24 63-86 184-225 (293)
No 1
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=2.1e-45 Score=268.28 Aligned_cols=138 Identities=48% Similarity=0.910 Sum_probs=123.2
Q ss_pred CcccccHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEec
Q 032176 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHS 87 (146)
Q Consensus 8 ~~~~~~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t 87 (146)
..|.++|.+||++|+++++++++++.+++.+++++|+.+++|+++|.||++||||||.|+++|.||++||++||+|+|.|
T Consensus 20 ~~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T 99 (160)
T 2a4d_A 20 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVT 99 (160)
T ss_dssp -CCCHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESB
T ss_pred CeeechHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEec
Confidence 44678899999999999999988886777776666632349999999999999999999999999999999999999999
Q ss_pred ccccCcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCCCCCCCCCCCCCC
Q 032176 88 RINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMA-APHNRKLVQPPEGTY 145 (146)
Q Consensus 88 ~i~HPni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~-~p~~~~~~n~~a~~~ 145 (146)
+||||||+..+|+||+++|+..++|+|++++++||++|+++|. +|++++|+|+|||..
T Consensus 100 ~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa~y 158 (160)
T 2a4d_A 100 KINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCY 158 (160)
T ss_dssp CCCCTTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTCBC
T ss_pred CceeCCEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhhccc
Confidence 9999999955999999998523789999999999999999995 799999999999853
No 2
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=7.7e-45 Score=264.49 Aligned_cols=135 Identities=47% Similarity=0.962 Sum_probs=120.4
Q ss_pred CCcccccHHHHHHHHHHHhHcC-CCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEE
Q 032176 7 GSSVVVPRNFRLLEELERGEKG-IGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRF 85 (146)
Q Consensus 7 ~~~~~~~~~kRL~~El~~l~~~-~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f 85 (146)
...+..+|.+||++|+++++++ +..+ +++.+.++++..+++|+++|.||++||||||.|+++|.||++||++||+|+|
T Consensus 15 ~~~~~~~~~~RL~kEl~~l~~~~~~~~-i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F 93 (156)
T 2q0v_A 15 YFQGIVPRSFRLLDELERGQKGNVSEG-VSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKF 93 (156)
T ss_dssp CCSSCCCHHHHHHHHHHHHHCC-CCTT-EEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred CCcccchHHHHHHHHHHHHHhCCCCCC-eEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEE
Confidence 4566788999999999999998 5555 7777755444223499999999999999999999999999999999999999
Q ss_pred ecccccCcccCCCCee---eccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 86 HSRINMTCVNHETGVV---EPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 86 ~t~i~HPni~~~~G~i---cl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
.|+||||||+. +|+| |+++|+ +|+|++++++||.+|+++|.+|++++|+|++||++|
T Consensus 94 ~t~i~HPNV~~-~G~icisCL~iL~---~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y 153 (156)
T 2q0v_A 94 DTKIEMSCVDN-CGRVIKNNLHILK---NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVY 153 (156)
T ss_dssp SBCCCCTTBCT-TSBBCGGGSHHHH---TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC
T ss_pred EcccccCCCcc-CCeEehhhccccc---CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHh
Confidence 99999999995 8999 777763 599999999999999999999999999999999987
No 3
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=2.1e-45 Score=262.70 Aligned_cols=131 Identities=56% Similarity=1.008 Sum_probs=116.0
Q ss_pred ccHHHHHHHHHHHhHcC-CCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccc
Q 032176 12 VPRNFRLLEELERGEKG-IGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRIN 90 (146)
Q Consensus 12 ~~~~kRL~~El~~l~~~-~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~ 90 (146)
.+|.+||++|+++++++ +..+ +++.+.++++..+++|+++|.||++||||||.|+++|.||++||++||+|+|.|+||
T Consensus 5 ~~~~~RL~kEl~~l~~~~~~~~-~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 83 (138)
T 1jat_B 5 VPRNFRLLEELEKGEKGFGPES-CSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKIN 83 (138)
T ss_dssp CCHHHHHHHHHHHHHC----CC-EEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCC-EEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccc
Confidence 46789999999999998 5555 777775545422349999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCee--eccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 91 MTCVNHETGVV--EPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 91 HPni~~~~G~i--cl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
||||+..+|+| |+++| ++|+|++++++||.+|+++|.+|++++|+|++||++|
T Consensus 84 HPnv~~~~G~i~~cL~~l---~~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 84 LPCVNPTTGEVQTDFHTL---RDWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp CTTBCTTTCBBCTTSHHH---HTCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred cCCEeCCCCEEeeecccC---CCCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 99999645999 89887 4899999999999999999999999999999999988
No 4
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=1.2e-44 Score=267.22 Aligned_cols=132 Identities=27% Similarity=0.431 Sum_probs=108.1
Q ss_pred cccHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccc
Q 032176 11 VVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRIN 90 (146)
Q Consensus 11 ~~~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~ 90 (146)
+..+.|||++|+++|+++++.+ +++.+.+++|++ +|+++|.||++||||||.|+++|.||++||++||+|+|.|+||
T Consensus 15 ~~~~~~rL~kEl~~l~~~~~~g-i~~~p~~~~nl~--~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~ 91 (172)
T 2awf_A 15 VPRGSLLLRRQLAELNKNPVEG-FSAGLIDDNDLY--RWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIW 91 (172)
T ss_dssp CCTTHHHHHHHHHHHHHSCCTT-EEEEESSTTCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCC
T ss_pred hHHHHHHHHHHHHHHHhCCCCC-EEEEECCCcccc--ccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCc
Confidence 4455899999999999998887 677766667876 9999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCeeeccCCCC-----------CCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 91 MTCVNHETGVVEPKKFGL-----------LVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 91 HPni~~~~G~icl~~l~~-----------~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
||||+. +|+||+++|.. .++|+|+++|++||++|+++|.+|++++|+|++||++|
T Consensus 92 HPNV~~-~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~ 157 (172)
T 2awf_A 92 HPNVDK-NGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEW 157 (172)
T ss_dssp CTTBCT-TCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC--------------
T ss_pred cCCCCC-CCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHH
Confidence 999995 89999999851 26899999999999999999999999999999999986
No 5
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=8.7e-45 Score=267.46 Aligned_cols=137 Identities=47% Similarity=0.894 Sum_probs=122.6
Q ss_pred CcccccHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEec
Q 032176 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHS 87 (146)
Q Consensus 8 ~~~~~~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t 87 (146)
+.++.+|.+||++|++++++++.++.+++.+++++|+.+++|+++|.||++||||||.|+++|.||++||++||+|+|.|
T Consensus 30 ~~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T 109 (170)
T 2hlw_A 30 KGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVT 109 (170)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECB
T ss_pred CcccCHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEec
Confidence 34678899999999999999988886777766666532349999999999999999999999999999999999999999
Q ss_pred ccccCcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCCCCCCCCCCCCC
Q 032176 88 RINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMA-APHNRKLVQPPEGT 144 (146)
Q Consensus 88 ~i~HPni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~-~p~~~~~~n~~a~~ 144 (146)
+||||||+..+|+||+++|+..++|+|+++|++||++|+++|. +|++++|+|+|||.
T Consensus 110 ~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa~ 167 (170)
T 2hlw_A 110 KINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQC 167 (170)
T ss_dssp CCCCSSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCCB
T ss_pred ccccCCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCccccc
Confidence 9999999855999999998423799999999999999999997 59999999999985
No 6
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.5e-45 Score=265.79 Aligned_cols=134 Identities=20% Similarity=0.318 Sum_probs=121.3
Q ss_pred CCCcccccHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEE
Q 032176 6 GGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRF 85 (146)
Q Consensus 6 ~~~~~~~~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f 85 (146)
+...++..+.+||++|+++++++++.+ +.+.+ +++|++ +|+++|.||+||||+||.|+++|.||++||++||+|+|
T Consensus 6 ~~~~~s~~~~~RL~kEl~~l~~~~~~g-i~~~~-~~~~l~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f 81 (158)
T 1zdn_A 6 NVENLPPHIIRLVYKEVTTLTADPPDG-IKVFP-NEEDLT--DLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYF 81 (158)
T ss_dssp --CCSCHHHHHHHHHHHHHHHHSCCTT-EEEEE-CSSCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred cccccCHHHHHHHHHHHHHHHhCCCCC-EEEEE-CCCChh--heeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEe
Confidence 444555567899999999999999888 66654 677876 99999999999999999999999999999999999999
Q ss_pred ecccccCcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 86 HSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 86 ~t~i~HPni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
.|+||||||+. +|+||+++|. ++|+|++++++||.+|+++|.+|++++|+|++||++|
T Consensus 82 ~t~i~HPnv~~-~G~iCl~iL~--~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~ 139 (158)
T 1zdn_A 82 LTKIFHPNVGA-NGEICVNVLK--RDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLL 139 (158)
T ss_dssp SSCCCCTTBCT-TSBBCHHHHT--TTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHH
T ss_pred ccCcccCCCCC-CCEEehhhcC--CCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 99999999995 8999999986 8999999999999999999999999999999998764
No 7
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1e-44 Score=266.00 Aligned_cols=130 Identities=24% Similarity=0.352 Sum_probs=119.4
Q ss_pred cHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccC
Q 032176 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (146)
Q Consensus 13 ~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (146)
.+.+||++|+++|++++..+ +++.+.+++|++ +|+++|.||+||||+||.|+++|.||++||++||+|+|.|+||||
T Consensus 4 ~a~~RL~kEl~~l~~~~~~g-i~~~~~~~~~l~--~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 80 (165)
T 2ucz_A 4 TAQKRLLKELQQLIKDSPPG-IVAGPKSENNIF--IWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHP 80 (165)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-EEEEESSSSCCS--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEECCCCCcc--EEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccC
Confidence 45789999999999998888 677766667876 999999999999999999999999999999999999999999999
Q ss_pred cccCCCCeeeccCCCC-----------CCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 93 CVNHETGVVEPKKFGL-----------LVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 93 ni~~~~G~icl~~l~~-----------~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
||+. +|+||+++|+. .++|+|+++|++||++|+++|.+|++++|+|.+||++|
T Consensus 81 Nv~~-~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~ 144 (165)
T 2ucz_A 81 NIYP-NGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILW 144 (165)
T ss_dssp TBCT-TSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHH
T ss_pred CCCC-CCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHH
Confidence 9995 89999999931 47999999999999999999999999999999998764
No 8
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=4e-45 Score=264.20 Aligned_cols=128 Identities=20% Similarity=0.373 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccCc
Q 032176 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (146)
Q Consensus 14 ~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPn 93 (146)
+.+||++|+++++++++.+ +.+.+.+++|++ +|+++|.||+||||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 2 ~~~RL~~El~~l~~~~~~~-i~~~~~~~~~l~--~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 78 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAH-ITLEFVSESDIH--HLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPN 78 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGC-CEEEESSSSCSS--EEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred hHHHHHHHHHHHHhCCCCC-EEEEECCCCCce--EEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCC
Confidence 4789999999999998777 667665544766 9999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 94 VNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 94 i~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
|+..+|.||+++|. ++|+|++++++||.+|+++|.+|++++|+|++||++|
T Consensus 79 i~~~~G~iCl~iL~--~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 129 (149)
T 1fxt_A 79 ISSVTGAICLDILK--NAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHY 129 (149)
T ss_dssp BCSSSCCBCCHHHH--TSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHH
T ss_pred CcCCCCeEeCCcCC--CCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 99559999999986 8999999999999999999999999999999998764
No 9
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=2.1e-44 Score=268.38 Aligned_cols=130 Identities=24% Similarity=0.376 Sum_probs=119.4
Q ss_pred cHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccC
Q 032176 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (146)
Q Consensus 13 ~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (146)
++.|||++||++++++++.+ +++.+++++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 7 ~a~kRL~kEl~~l~~~~~~g-i~~~~~~~~nl~--~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 83 (183)
T 3rz3_A 7 SSQKALLLELKGLQEEPVEG-FRVTLVDEGDLY--NWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHP 83 (183)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-EEEEECTTCCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEecCccchh--heeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccC
Confidence 45889999999999999888 677767888876 999999999999999999999999999999999999999999999
Q ss_pred cccCCCCeeeccCCCC-----------CCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 93 CVNHETGVVEPKKFGL-----------LVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 93 ni~~~~G~icl~~l~~-----------~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
||+. +|+||+++|.. .++|+|+++|++||++|+++|.+|++++|+|.+||.+|
T Consensus 84 nV~~-~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~ 147 (183)
T 3rz3_A 84 NIYE-TGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMY 147 (183)
T ss_dssp TBCT-TSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHH
T ss_pred CCCC-CCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 9995 99999999951 27899999999999999999999999999999998764
No 10
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=2.2e-44 Score=263.95 Aligned_cols=129 Identities=21% Similarity=0.362 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccCc
Q 032176 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (146)
Q Consensus 14 ~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPn 93 (146)
..|||++|+++++++++.+ +++.+.+++|++ +|+++|.||+||||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 4 a~~RL~kEl~~l~~~~~~g-i~~~~~~~~nl~--~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPN 80 (164)
T 3h8k_A 4 ALKRLMAEYKQLTLNPPEG-IVAGPMNEENFF--EWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPN 80 (164)
T ss_dssp HHHHHHHHHHHHHHSCCTT-EEEEESSTTCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEEECCCCCcc--EEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCC
Confidence 4789999999999998888 677666666876 9999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeeeccCCCC-----------CCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 94 VNHETGVVEPKKFGL-----------LVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 94 i~~~~G~icl~~l~~-----------~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
|+ .+|+||+++|.. .++|+|++||++||.+|+++|.+|++++|+|++||++|
T Consensus 81 V~-~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~ 143 (164)
T 3h8k_A 81 IY-PDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMW 143 (164)
T ss_dssp BC-TTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHH
T ss_pred CC-CCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHH
Confidence 99 599999999841 27899999999999999999999999999999998765
No 11
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=3.2e-44 Score=261.27 Aligned_cols=127 Identities=28% Similarity=0.475 Sum_probs=118.1
Q ss_pred cHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccC
Q 032176 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (146)
Q Consensus 13 ~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (146)
.+.+||++|++++++++..+ +.+.+ +++|++ +|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 9 ~~~~RL~kEl~~l~~~~~~~-i~~~p-~~~~l~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 84 (156)
T 2e2c_A 9 SVSKRLQQELRTLLMSGDPG-ITAFP-DGDNLF--KWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHP 84 (156)
T ss_dssp CHHHHHHHHHHHHHHHCCTT-EEEEE-SSSCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEE-CCCCcc--EEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccC
Confidence 45899999999999988777 66654 567876 999999999999999999999999999999999999999999999
Q ss_pred cccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 93 CVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 93 ni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
||+. +|.||+++|. ++|+|++++.+||.+|+++|.+|++++|+|++||++|
T Consensus 85 nv~~-~G~iCl~iL~--~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~ 135 (156)
T 2e2c_A 85 NVDQ-SGNICLDILK--ENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW 135 (156)
T ss_dssp TBCT-TCBBCCGGGT--TTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT
T ss_pred CCcc-CceEECcccc--ccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh
Confidence 9995 9999999986 8999999999999999999999999999999999775
No 12
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=2.5e-44 Score=264.24 Aligned_cols=129 Identities=25% Similarity=0.470 Sum_probs=119.4
Q ss_pred cccHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccc
Q 032176 11 VVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRIN 90 (146)
Q Consensus 11 ~~~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~ 90 (146)
...+.+||++|+++++++++.+ +.+.+ +++|++ +|+++|.||+|||||||.|+++|.||++||++||+|+|.|+||
T Consensus 19 ~~~~~~RL~kEl~~l~~~~~~g-i~~~~-~~~nl~--~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 94 (166)
T 2ayv_A 19 FQGALKRINKELNDLSKDPPTN-CSAGP-VGDDMF--HWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIY 94 (166)
T ss_dssp CTTHHHHHHHHHHHHHHSCCTT-EEEEE-CSSCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCC
T ss_pred CcHHHHHHHHHHHHHHhCCCCC-EEEEE-cCCCcc--eeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCc
Confidence 4457899999999999998877 66665 567876 9999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 91 MTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 91 HPni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
||||+ .+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|++||.+|
T Consensus 95 HPNI~-~~G~ICL~iL~--~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~ 147 (166)
T 2ayv_A 95 HPNIN-SQGAICLDILK--DQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLY 147 (166)
T ss_dssp BTTBC-TTCBBCCGGGT--TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred CCcCC-CCCeEEccccc--ccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHH
Confidence 99999 59999999996 8999999999999999999999999999999998764
No 13
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=2.8e-44 Score=260.27 Aligned_cols=127 Identities=25% Similarity=0.458 Sum_probs=118.3
Q ss_pred cHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccC
Q 032176 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (146)
Q Consensus 13 ~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (146)
.+.|||++|+++++++++.+ +++.+ .++|++ +|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 4 ~a~~RL~kEl~~l~~~~~~~-i~~~p-~~~nl~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 79 (151)
T 4gpr_A 4 MAMRRIQKELREIQQDPPCN-CSAGP-VGDDIF--HWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHP 79 (151)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-EEEEE-SSSCTT--EEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEE-cCCCce--EEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccc
Confidence 35889999999999999888 66665 567876 999999999999999999999999999999999999999999999
Q ss_pred cccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 93 CVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 93 ni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
||+ .+|+||+++|. ++|+|++++++||.+|+++|.+|++++|+|++||++|
T Consensus 80 nv~-~~G~iCl~iL~--~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 130 (151)
T 4gpr_A 80 NIN-KNGVICLDILK--DQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVL 130 (151)
T ss_dssp TBC-TTCBBCCGGGT--TTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHH
T ss_pred eEC-CCCEEEccccc--CCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHH
Confidence 999 59999999986 8999999999999999999999999999999998764
No 14
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=4.6e-44 Score=260.15 Aligned_cols=125 Identities=22% Similarity=0.397 Sum_probs=116.5
Q ss_pred HHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccCcc
Q 032176 15 NFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCV 94 (146)
Q Consensus 15 ~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni 94 (146)
.+||++|++++++++..+ +.+.+ +++|++ +|+++|.||+||||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 7 ~~RL~kE~~~l~~~~~~~-i~~~~-~~~~l~--~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 82 (155)
T 1jat_A 7 PKRIIKETEKLVSDPVPG-ITAEP-HDDNLR--YFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNI 82 (155)
T ss_dssp CHHHHHHHHHHHHSCCTT-EEEEE-ETTEEE--EEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred HHHHHHHHHHHHhCCCCC-EEEEE-CCCchh--EEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCC
Confidence 679999999999998887 66654 557755 99999999999999999999999999999999999999999999999
Q ss_pred cCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 95 NHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 95 ~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
+ .+|.||+++|. ++|+|++++.+||.+|+++|.+|++++|+|.+||.+|
T Consensus 83 ~-~~G~iCl~iL~--~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 131 (155)
T 1jat_A 83 D-RLGRICLDVLK--TNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDW 131 (155)
T ss_dssp C-TTCCBCCGGGT--TTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHH
T ss_pred C-CCCEEEchhhc--cCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 9 69999999986 8999999999999999999999999999999998764
No 15
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2e-44 Score=261.87 Aligned_cols=125 Identities=21% Similarity=0.377 Sum_probs=114.6
Q ss_pred HHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccCcc
Q 032176 15 NFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCV 94 (146)
Q Consensus 15 ~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni 94 (146)
.+||++|+++++++++.+ +++.+ .++|++ +|+++|.||+||||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 7 ~~RL~kEl~~l~~~~~~~-i~~~~-~~~~l~--~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 82 (154)
T 2c2v_B 7 PRRIIKETQRLLAEPVPG-IKAEP-DESNAR--YFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNV 82 (154)
T ss_dssp CHHHHHHHHHHHHSCCTT-EEEEE-CSSCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTB
T ss_pred HHHHHHHHHHHHhCCCCC-EEEEE-CCCchh--eEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcC
Confidence 579999999999998888 66654 567876 99999999999999999999999999999999999999999999999
Q ss_pred cCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 95 NHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 95 ~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
+ .+|+||+++|. ++|+|++++++||.+|+++|.+|++++|+|.+||++|
T Consensus 83 ~-~~G~iCl~iL~--~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~ 131 (154)
T 2c2v_B 83 D-KLGRICLDILK--DKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQW 131 (154)
T ss_dssp C-TTCBBCCHHHH--TSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHH
T ss_pred c-cCCeEEchhcc--CCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 9 58999999986 8999999999999999999999999999999998764
No 16
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=3.1e-44 Score=263.05 Aligned_cols=128 Identities=25% Similarity=0.366 Sum_probs=116.0
Q ss_pred HHHHHHHHHHhHcCCCCCceEEeecCC-C---CCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccc
Q 032176 15 NFRLLEELERGEKGIGDGTVSYGMDDG-D---DIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRIN 90 (146)
Q Consensus 15 ~kRL~~El~~l~~~~~~~~~~~~~~~~-~---~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~ 90 (146)
.+||++|++++++++++++ .+.+.++ | |+ ++|+++|.||+|||||||.|+++|.||++||++||+|+|.|+||
T Consensus 12 ~~RL~kEl~~l~~~~p~gi-~~~p~~~~d~~~nl--~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~ 88 (163)
T 3rcz_B 12 KTRLQEERKQWRRDHPFGF-YAKPCKSSDGGLDL--MNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLF 88 (163)
T ss_dssp HHHHHHHHHHHHHSCCTTC-EEEEEECTTSSEEE--EEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHhCCCCCE-EEEEccCcCCCCCc--cEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCc
Confidence 7899999999999999994 5544332 2 54 59999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 91 MTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 91 HPni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
||||+ .+|+||+++|...++|+|+++|++||.+|+++|.+|++++|+|++||++|
T Consensus 89 HPnV~-~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~ 143 (163)
T 3rcz_B 89 HPNVY-PSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMF 143 (163)
T ss_dssp STTBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHH
T ss_pred cCCCC-CCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 99999 59999999997335799999999999999999999999999999998764
No 17
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=4e-44 Score=258.95 Aligned_cols=125 Identities=21% Similarity=0.358 Sum_probs=116.0
Q ss_pred HHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccCcc
Q 032176 15 NFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCV 94 (146)
Q Consensus 15 ~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni 94 (146)
.+||++|+++++++++.+ +++.+ .++|++ +|+++|.||+|||||||.|+++|.||++||++||+|+|.|+||||||
T Consensus 3 ~~RL~kEl~~l~~~~~~~-i~~~~-~~~~l~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 78 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPG-IMAVP-VPENYR--HFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNI 78 (149)
T ss_dssp CHHHHHHHHHHHHSCCTT-EEEEE-ETTEEE--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred HHHHHHHHHHHHhCCCCC-EEEEE-CCCccc--EEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCC
Confidence 479999999999998887 66665 557755 99999999999999999999999999999999999999999999999
Q ss_pred cCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 95 NHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 95 ~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
+. +|+||+++|. ++|+|++++++||.+|+++|.+|++++|+|.+||.+|
T Consensus 79 ~~-~G~iCl~iL~--~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 127 (149)
T 2r0j_A 79 DK-LGRICLDILK--DKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHF 127 (149)
T ss_dssp CT-TCBBCCGGGT--TTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHH
T ss_pred CC-CCEEechhcC--CCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHH
Confidence 95 8999999996 8999999999999999999999999999999998754
No 18
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=6.4e-44 Score=261.84 Aligned_cols=128 Identities=25% Similarity=0.469 Sum_probs=118.5
Q ss_pred ccHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEeccccc
Q 032176 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINM 91 (146)
Q Consensus 12 ~~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~H 91 (146)
..+.+||++|+++++++++.+ +++.+ .++|++ +|+++|.||+|||||||.|+++|.||++||++||+|+|.|+|||
T Consensus 18 ~~~~~RL~kEl~~l~~~~~~g-i~~~p-~~~nl~--~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~H 93 (165)
T 2c4o_A 18 SMALKRIHKELNDLARDPPAQ-CSAGP-VGDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 93 (165)
T ss_dssp HHHHHHHHHHHHHHHSSCCTT-EEEEE-SSSCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCB
T ss_pred cHHHHHHHHHHHHHHhCCCCC-EEEEE-cCCCcc--eeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcC
Confidence 346899999999999998877 66665 567876 99999999999999999999999999999999999999999999
Q ss_pred CcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 92 TCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 92 Pni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
|||+. +|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.+||.+|
T Consensus 94 PnV~~-~G~ICl~iL~--~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~ 145 (165)
T 2c4o_A 94 PNINS-NGSICLDILR--SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIY 145 (165)
T ss_dssp TTBCT-TCBBCCGGGT--TTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHH
T ss_pred CcCCC-CCeEeehhhc--CCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHH
Confidence 99994 9999999986 8999999999999999999999999999999998654
No 19
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=4.1e-44 Score=263.76 Aligned_cols=127 Identities=28% Similarity=0.487 Sum_probs=117.4
Q ss_pred cHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccC
Q 032176 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (146)
Q Consensus 13 ~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (146)
++.+||++|+++++++++.+ +.+.+ .++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||
T Consensus 4 ~a~~RL~kEl~~l~~~~~~g-i~~~p-~~~nl~--~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HP 79 (169)
T 1ayz_A 4 PARRRLMRDFKRMKEDAPPG-VSASP-LPDNVM--VWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHP 79 (169)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-EEEEE-ETTEEE--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEe-cCCccc--cceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccC
Confidence 35789999999999999888 55554 567765 999999999999999999999999999999999999999999999
Q ss_pred cccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 93 CVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 93 ni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
||+. +|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|++||++|
T Consensus 80 NI~~-~G~ICl~iL~--~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~ 130 (169)
T 1ayz_A 80 NVYA-NGEICLDILQ--NRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLF 130 (169)
T ss_dssp TBCT-TSBBCCGGGT--TTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHH
T ss_pred CCCC-CCeEeehhhc--cCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHH
Confidence 9995 9999999986 8999999999999999999999999999999998764
No 20
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=4.7e-44 Score=258.79 Aligned_cols=126 Identities=25% Similarity=0.478 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccCc
Q 032176 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (146)
Q Consensus 14 ~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPn 93 (146)
+.+||++|+++++++++.+ +++.+ .++|++ +|+++|.||+||||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 5 ~~~RL~kEl~~l~~~~~~~-~~~~~-~~~~l~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (150)
T 1z2u_A 5 ALKRIQKELQDLGRDPPAQ-CSAGP-VGDDLF--HWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 80 (150)
T ss_dssp HHHHHHHHHHHHHHSCCSS-EEEEE-ETTEEE--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEEE-CCCcce--EEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCc
Confidence 5789999999999998887 66665 457755 9999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 94 VNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 94 i~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
|+. +|+||+++|. ++|+|++++.+||.+|+++|.+|++++|+|.+||.+|
T Consensus 81 v~~-~G~iCl~iL~--~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~ 130 (150)
T 1z2u_A 81 INS-NGSICLDILR--SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIY 130 (150)
T ss_dssp BCT-TCBBCCGGGT--TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred CCC-CCeEeecccc--CCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHH
Confidence 994 9999999986 8999999999999999999999999999999998654
No 21
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.3e-44 Score=265.68 Aligned_cols=129 Identities=24% Similarity=0.380 Sum_probs=118.1
Q ss_pred cccHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccc
Q 032176 11 VVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRIN 90 (146)
Q Consensus 11 ~~~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~ 90 (146)
+..+.+||++|++++++++..+ +.+.+ +++|++ +|+++|.||+||||+||.|+++|.||++||++||+|+|.|+||
T Consensus 28 ~~~~~~RL~kEl~~l~~~~~~g-i~~~p-~~~nl~--~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 103 (179)
T 1i7k_A 28 RGPVGKRLQQELMTLMMSGDKG-ISAFP-ESDNLF--KWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCY 103 (179)
T ss_dssp --CHHHHHHHHHHHHHHHCCTT-EEEEE-ETTEEE--EEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred ChHHHHHHHHHHHHHHhCCCCC-EEEEE-cCCccc--ccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCc
Confidence 4557899999999999988777 56554 567755 9999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 91 MTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 91 HPni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
||||+. +|+||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|++||++|
T Consensus 104 HPNV~~-~G~ICL~iL~--~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~ 156 (179)
T 1i7k_A 104 HPNVDT-QGNISLDILK--EKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW 156 (179)
T ss_dssp STTBCT-TCBBCCGGGT--TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT
T ss_pred cCcccc-CCeEEcccCc--CcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh
Confidence 999995 9999999986 8999999999999999999999999999999999876
No 22
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9.1e-44 Score=261.92 Aligned_cols=129 Identities=22% Similarity=0.366 Sum_probs=118.4
Q ss_pred cHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccC
Q 032176 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (146)
Q Consensus 13 ~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (146)
.+.+||++|+++++++++.+ +.+.+ +++|++ +|+++|.||+||||+||.|+++|.||++||++||+|+|.|+||||
T Consensus 4 ~~~~RL~kEl~~l~~~~~~g-i~~~~-~~~~l~--~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (169)
T 1yh2_A 4 QRASRLKRELHMLATEPPPG-ITCWQ-DKDQMD--DLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHP 79 (169)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-EEEEE-SSSCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEe-CCCchh--eEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccc
Confidence 46899999999999998887 66654 677876 999999999999999999999999999999999999999999999
Q ss_pred cccCCCCeeeccCCCC--CCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 93 CVNHETGVVEPKKFGL--LVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 93 ni~~~~G~icl~~l~~--~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
||+ .+|.||+++|+. .++|+|+++|++||.+|+++|.+|++++|+|.+||++|
T Consensus 80 Nv~-~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~ 134 (169)
T 1yh2_A 80 NID-SAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEF 134 (169)
T ss_dssp TBC-TTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred cCC-cCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHH
Confidence 999 599999999852 27999999999999999999999999999999998764
No 23
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=7.8e-44 Score=258.18 Aligned_cols=127 Identities=26% Similarity=0.521 Sum_probs=117.3
Q ss_pred cHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccC
Q 032176 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (146)
Q Consensus 13 ~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (146)
++.+||++|+++++++++.+ +.+.+ .++|++ +|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 4 ~a~~RL~~E~~~l~~~~~~~-i~~~~-~~~~l~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (152)
T 2aak_A 4 PARKRLMRDFKRLQQDPPAG-ISGAP-QDNNIM--LWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHP 79 (152)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-EEEEE-ETTEEE--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEe-CCCCcc--EEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccC
Confidence 45789999999999999888 55554 567765 999999999999999999999999999999999999999999999
Q ss_pred cccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 93 CVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 93 ni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
||+. +|.||+++|. ++|+|++++.+||.+|+++|.+|++++|+|++||++|
T Consensus 80 nv~~-~G~iCl~iL~--~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 130 (152)
T 2aak_A 80 NIYA-DGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMY 130 (152)
T ss_dssp TBCT-TSBBCCGGGT--TSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHH
T ss_pred CCCC-CCEEechhhc--CCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHH
Confidence 9995 9999999986 8999999999999999999999999999999998764
No 24
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.9e-44 Score=263.86 Aligned_cols=135 Identities=21% Similarity=0.295 Sum_probs=120.7
Q ss_pred CcccccHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEec
Q 032176 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHS 87 (146)
Q Consensus 8 ~~~~~~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t 87 (146)
.+++..+.+||++|+++|++++..+ +.+.+ .++|++ +|+++|.||++||||||.|+++|.||++||++||+|+|.|
T Consensus 18 ~~M~~~a~~RL~kEl~~l~~~~~~g-i~~~p-~~~nl~--~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T 93 (169)
T 1yrv_A 18 GSMHGRAYLLLHRDFCDLKENNYKG-ITAKP-VSEDMM--EWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFIT 93 (169)
T ss_dssp TGGGCHHHHHHHHHHHHHHHHCCTT-EEEEE-CSTTSC--EEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESS
T ss_pred CccChHHHHHHHHHHHHHHhCCCCC-EEEEE-cCCccc--cceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecC
Confidence 3444557899999999999998888 55554 567866 9999999999999999999999999999999999999999
Q ss_pred ccccCcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 88 RINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 88 ~i~HPni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
+||||||+..+|.||+++|+..++|+|+++|++||.+|+++|.+|++++|+|++||++|
T Consensus 94 ~i~HPNI~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~ 152 (169)
T 1yrv_A 94 IPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARIL 152 (169)
T ss_dssp CCCCTTBCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHH
T ss_pred CCccCcccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHH
Confidence 99999993369999999985227999999999999999999999999999999998765
No 25
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=6.7e-44 Score=262.09 Aligned_cols=137 Identities=17% Similarity=0.203 Sum_probs=122.4
Q ss_pred CCCCcccccHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEE
Q 032176 5 SGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVR 84 (146)
Q Consensus 5 ~~~~~~~~~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~ 84 (146)
+.......++.+||++|+++++++++++ +.+.++++++++ .|+++| ||++|||+||.|+++|.||++||++||+|+
T Consensus 6 ~~~~~~~s~~~~RL~kEl~~l~~~~~~g-i~~~~~~~~~l~--~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~ 81 (167)
T 3fn1_B 6 SDSTRRVSVRDKLLVKEVAELEANLPCT-CKVHFPDPNKLH--CFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVK 81 (167)
T ss_dssp --CCCCCCHHHHHHHHHHHHHGGGSCTT-EEEECSSSSCTT--EEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEE
T ss_pred CCCccchhHHHHHHHHHHHHHHhCCCCC-EEEEeCCCCcce--eEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeE
Confidence 3445556778999999999999999888 677766778876 999998 899999999999999999999999999999
Q ss_pred EecccccCcccCCCCeeeccCCCC----CCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCCCCCC
Q 032176 85 FHSRINMTCVNHETGVVEPKKFGL----LVNWQREYTMEDILTQLKKEMAA-PHNRKLVQPPEGTYF 146 (146)
Q Consensus 85 f~t~i~HPni~~~~G~icl~~l~~----~~~W~p~~~l~~il~~i~~ll~~-p~~~~~~n~~a~~~~ 146 (146)
|.|+||||||+ .+|+||+++|.. .++|+|+++|++||.+|+++|.+ |++++|+|++||.+|
T Consensus 82 f~t~i~HPnv~-~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~ 147 (167)
T 3fn1_B 82 CLTKIWHPNIT-ETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHH 147 (167)
T ss_dssp ECSCCCCSSBC-TTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHH
T ss_pred ecCCcccCCCC-CCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHH
Confidence 99999999999 599999999962 13899999999999999999999 799999999998764
No 26
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=9e-44 Score=266.70 Aligned_cols=129 Identities=26% Similarity=0.429 Sum_probs=115.3
Q ss_pred ccHHHHHHHHHHHhHcCCC-------------CCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCC
Q 032176 12 VPRNFRLLEELERGEKGIG-------------DGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPE 78 (146)
Q Consensus 12 ~~~~kRL~~El~~l~~~~~-------------~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~ 78 (146)
..+.+||++|+++++++++ .+ +.+.+ .++|++ +|+++|.||+|||||||.|+++|.||++||+
T Consensus 31 ~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~g-i~v~~-~~~nl~--~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~ 106 (193)
T 2f4z_A 31 PREQARLLKELADIQQLQRAHDSEPAATHSTSHG-VSAQI-VGGDIH--RWRGFIAGPLGTPYEGGHFTLDIVIPPDYPY 106 (193)
T ss_dssp -CHHHHHHHHHHHHHHC----------------C-EEEEE-ETTEEE--EEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CHHHHHHHHHHHHHHhCCCccccccccccCCCCc-EEEEE-cCCCcc--eEEEEEeCCCCCCcCCCEEEEEEECCCcCCC
Confidence 3468899999999999876 45 66665 456755 9999999999999999999999999999999
Q ss_pred CCCEEEEecccccCcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 79 KPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 79 ~pP~v~f~t~i~HPni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
+||+|+|.|+||||||+..+|.||+++|. ++|+|+++|++||++|+++|.+|++++|+|++||++|
T Consensus 107 ~PP~V~F~T~i~HPNI~~~~G~ICL~iL~--~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~ 172 (193)
T 2f4z_A 107 NPPKMKFVTKIWHPNISSQTGAICLDILK--HEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMM 172 (193)
T ss_dssp SCCEEEESSCCCBTTBCTTTCBBCCGGGT--TTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred CCCeEEEecCCccCCCcCCCCEEECcccc--ccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 99999999999999999658999999986 8899999999999999999999999999999998765
No 27
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=2.7e-43 Score=257.07 Aligned_cols=128 Identities=23% Similarity=0.346 Sum_probs=116.5
Q ss_pred cHHHHHHHHHHHhHcC---CCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEeccc
Q 032176 13 PRNFRLLEELERGEKG---IGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 89 (146)
Q Consensus 13 ~~~kRL~~El~~l~~~---~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i 89 (146)
.+.+||++|+++++++ +..+ +.+.+ .++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|
T Consensus 8 ~a~~RL~kEl~~l~~~~~~~~~~-i~~~~-~~~~l~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 83 (159)
T 2bep_A 8 IAVQRIKREFKEVLKSEETSKNQ-IKVDL-VDENFT--ELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI 83 (159)
T ss_dssp HHHHHHHHHHHHHHHCHHHHTTS-EEEEE-CSSSSS--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred HHHHHHHHHHHHHHhcCCCCCCC-EEEEe-CCCchh--eEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCC
Confidence 3578999999999985 3455 66665 456766 999999999999999999999999999999999999999999
Q ss_pred ccCcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 90 NMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 90 ~HPni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
|||||+..+|.||+++|. ++|+|++++.+||.+|+++|.+|++++|+|++||++|
T Consensus 84 ~HPni~~~~G~iCl~iL~--~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 138 (159)
T 2bep_A 84 WHPNISSVTGAICLDILK--DQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQY 138 (159)
T ss_dssp CBTTBCTTTCBBCCGGGT--TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred CccCCCCCCCEEeChhhh--ccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 999999668999999986 8899999999999999999999999999999998764
No 28
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=1.9e-43 Score=258.34 Aligned_cols=131 Identities=21% Similarity=0.315 Sum_probs=116.7
Q ss_pred ccHHHHHHHHHHHhHcCCCCCceEEeecC----CCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEec
Q 032176 12 VPRNFRLLEELERGEKGIGDGTVSYGMDD----GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHS 87 (146)
Q Consensus 12 ~~~~kRL~~El~~l~~~~~~~~~~~~~~~----~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t 87 (146)
..+.+||++|+++++++++.++ .+.+.. ++|+ ++|+++|.||+||||+||.|+++|.||++||++||+|+|.|
T Consensus 6 ~~a~~RL~kE~~~l~~~~~~g~-~~~p~~~~~~~~nl--~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 82 (161)
T 2grr_A 6 GIALSRLAQERKAWRKDHPFGF-VAVPTKNPDGTMNL--MNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEP 82 (161)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTC-EEEEEECTTSCEEE--EEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred HHHHHHHHHHHHHHHhCCCCCE-EEEeccccCCCCCc--cEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEec
Confidence 3468999999999999998884 444322 2465 49999999999999999999999999999999999999999
Q ss_pred ccccCcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 88 RINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 88 ~i~HPni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
+||||||+ .+|.||+++|+..++|+|++++.+||.+|+++|.+|++++|+|++||++|
T Consensus 83 ~i~HPnv~-~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 140 (161)
T 2grr_A 83 PLFHPNVY-PSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIY 140 (161)
T ss_dssp CCCSTTBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred CcccCCCC-CCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 99999999 59999999996235899999999999999999999999999999998764
No 29
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=1.8e-43 Score=257.52 Aligned_cols=129 Identities=22% Similarity=0.345 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHhHcCCCCCceEEeecCC----CCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEeccc
Q 032176 14 RNFRLLEELERGEKGIGDGTVSYGMDDG----DDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 89 (146)
Q Consensus 14 ~~kRL~~El~~l~~~~~~~~~~~~~~~~----~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i 89 (146)
+.+||++|+++++++++.+ +.+.+... +|+ ++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+|
T Consensus 5 a~~RL~kE~~~l~~~~~~g-~~~~p~~~~~~~~nl--~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 81 (157)
T 2gjd_A 5 CLQRLQEERKKWRKDHPFG-FYAKPVKKADGSMDL--QKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGF 81 (157)
T ss_dssp HHHHHHHHHHHHHHCCCTT-CEEEEEECTTSCEEE--EEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEEeccccCCCCcc--cEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCC
Confidence 5789999999999999888 44444321 354 5999999999999999999999999999999999999999999
Q ss_pred ccCcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 90 NMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 90 ~HPni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
|||||+ .+|.||+++|+..++|+|+++|++||.+|+++|.+|++++|+|++||++|
T Consensus 82 ~HPnv~-~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 137 (157)
T 2gjd_A 82 YHPNVY-PSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSF 137 (157)
T ss_dssp CCTTBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHH
T ss_pred ccCCCC-CCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 999999 59999999997223899999999999999999999999999999998764
No 30
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1.2e-43 Score=269.97 Aligned_cols=129 Identities=21% Similarity=0.415 Sum_probs=119.0
Q ss_pred ccHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEeccccc
Q 032176 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINM 91 (146)
Q Consensus 12 ~~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~H 91 (146)
..+.+||++|+++++++++.+ +.+.+ .++|++ +|+++|.||+||||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 22 s~a~~RL~kEl~~l~~~~~~g-i~~~p-~~~nl~--~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~H 97 (216)
T 2pwq_A 22 SKELLRLQKELKDIENENVQE-IDAHI-KDSNFF--EWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWH 97 (216)
T ss_dssp CHHHHHHHHHHHHHHHSCTTT-EEEEE-CSSCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred CHHHHHHHHHHHHHHhCCCCC-EEEEE-cCCccc--eeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcC
Confidence 346899999999999998888 66665 567766 99999999999999999999999999999999999999999999
Q ss_pred CcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 92 TCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 92 Pni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
|||+..+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|++||++|
T Consensus 98 PNI~~~~G~ICL~iL~--~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~ 150 (216)
T 2pwq_A 98 PNISSQTGAICLDVLK--NEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMY 150 (216)
T ss_dssp TTBCTTTCBBCCHHHH--HHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred CCCcCCCCEEEchhhc--ccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 9999668999999986 8899999999999999999999999999999998764
No 31
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=6e-44 Score=271.52 Aligned_cols=129 Identities=19% Similarity=0.371 Sum_probs=118.2
Q ss_pred cHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccC
Q 032176 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (146)
Q Consensus 13 ~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (146)
++.+||++|+++++++++.+ +++.+.++++++ +|+++|.||+||||+||.|+++|.||++||++||+|+|.|+||||
T Consensus 2 ~a~~RL~kEl~~l~~~~~~g-i~~~p~~~~~l~--~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HP 78 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAH-ITLEFVSESDIH--HLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHP 78 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTT-CEECCCSSSSCC--EEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCS
T ss_pred hHHHHHHHHHHHHHhCCCCC-EEEEECCCcccc--ccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccC
Confidence 35789999999999998888 677665555554 999999999999999999999999999999999999999999999
Q ss_pred cccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 93 CVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 93 ni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
||+..+|.||+++|. ++|+|++|+.+||.+|+++|.+|++++|+|++||++|
T Consensus 79 NI~~~~G~ICL~iL~--~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~ 130 (215)
T 1tte_A 79 NISSVTGAICLDILR--NAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHY 130 (215)
T ss_dssp SSCSSSSCCCSSTTT--CCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHH
T ss_pred cCcCCCCEEECccCC--CCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 999549999999996 8999999999999999999999999999999998764
No 32
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=5.1e-43 Score=254.62 Aligned_cols=127 Identities=19% Similarity=0.338 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccCc
Q 032176 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (146)
Q Consensus 14 ~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPn 93 (146)
+.+||++|+++++++++.+ +.+..++++|++ +|+++|. |+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 5 ~~~RL~kEl~~l~~~~~~~-i~~~~~~~~~l~--~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (155)
T 1wzv_A 5 ASMRVVKELEDLQKKPPPY-LRNLSSDDANVL--VWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPN 80 (155)
T ss_dssp CHHHHHHHHHHHHHSCCTT-EEEEEECSSCTT--EEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEEecCCCchh--eEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCc
Confidence 4789999999999999887 566445778876 9999999 99999999999999999999999999999999999999
Q ss_pred ccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 94 VNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 94 i~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
|+. +|.||+++|+ .++|+|++++.+||.+|+++|.+|++++|+|++||.+|
T Consensus 81 V~~-~G~iCl~iL~-~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 131 (155)
T 1wzv_A 81 VDE-NGQICLPIIS-SENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLL 131 (155)
T ss_dssp BCT-TCBCCCGGGC-TTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHH
T ss_pred CCC-CCeEeecCCC-ccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHH
Confidence 995 9999999983 48999999999999999999999999999999998764
No 33
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=1e-42 Score=256.98 Aligned_cols=131 Identities=19% Similarity=0.279 Sum_probs=115.6
Q ss_pred cHHHHHHHHHHHhHc-C-CC-----C--C-ceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCE
Q 032176 13 PRNFRLLEELERGEK-G-IG-----D--G-TVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPS 82 (146)
Q Consensus 13 ~~~kRL~~El~~l~~-~-~~-----~--~-~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~ 82 (146)
.+.+||++|++++++ + +. + + .+.+...+++|++ +|+++|.||++|||+||.|+++|.||++||++||+
T Consensus 6 ~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~--~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~ 83 (172)
T 2y9m_A 6 TCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLS--KWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPK 83 (172)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCE
T ss_pred HHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchh--EEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCE
Confidence 458899999999998 4 32 2 2 2333333778876 99999999999999999999999999999999999
Q ss_pred EEEec-ccccCcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 83 VRFHS-RINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 83 v~f~t-~i~HPni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
|+|.| +||||||+..+|+||+++|. .++|+|++++++||.+|+++|.+|++++|+|++||++|
T Consensus 84 v~f~t~~i~HPni~~~~G~iCl~iL~-~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~ 147 (172)
T 2y9m_A 84 ISFMQNNILHCNVKSATGEICLNILK-PEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNII 147 (172)
T ss_dssp EEECTTSCCCTTEETTTTEECCGGGS-TTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHH
T ss_pred EEEeeCCeecCCCcCCCCEEeccccC-CCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 99999 99999996569999999984 48999999999999999999999999999999998764
No 34
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.2e-42 Score=260.93 Aligned_cols=127 Identities=28% Similarity=0.460 Sum_probs=118.0
Q ss_pred cHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccC
Q 032176 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (146)
Q Consensus 13 ~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (146)
.+.+||++||++|+++++.+ +.+.+ .++|++ +|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+||||
T Consensus 48 ~a~~RL~kEl~~l~~~~~~g-i~~~p-~~~nl~--~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 123 (194)
T 3bzh_A 48 TSAKRIQKELADITLDPPPN-CSAGP-KGDNIY--EWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHC 123 (194)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-EEEEE-SSSCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBT
T ss_pred HHHHHHHHHHHHHHhCCCCC-ceeec-ccCccc--cceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccc
Confidence 36899999999999998877 66654 567876 999999999999999999999999999999999999999999999
Q ss_pred cccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 93 CVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 93 ni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
||+. +|.||+++|. ++|+|+++|.+||++|+++|.+|++++|+|.+||.+|
T Consensus 124 NV~~-~G~ICL~iL~--~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~ 174 (194)
T 3bzh_A 124 NINS-QGVICLDILK--DNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQY 174 (194)
T ss_dssp TBCT-TCBBCCGGGT--TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred eECC-CCceechhhh--ccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHH
Confidence 9995 9999999986 8999999999999999999999999999999998764
No 35
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.4e-43 Score=259.06 Aligned_cols=127 Identities=14% Similarity=0.317 Sum_probs=116.5
Q ss_pred cccHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccc
Q 032176 11 VVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRIN 90 (146)
Q Consensus 11 ~~~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~ 90 (146)
..++.+||++|++++ +++++ +++.+++++|++ +|+++| ||++||||||.|+++|.||++||++||+|+|.|+||
T Consensus 24 ~~~~~~RL~kEl~~l--~~~~~-i~~~~p~~~nl~--~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~ 97 (180)
T 2nvu_C 24 ASAAQLRIQKDINEL--NLPKT-CDISFSDPDDLL--NFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVY 97 (180)
T ss_dssp CCHHHHHHHHHHHTC--CCCTT-EEEECSSTTCTT--EEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred ccHHHHHHHHHHHhc--CCCCC-eEEEeccccccc--ceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCc
Confidence 455789999999999 35566 677766788876 999998 999999999999999999999999999999999999
Q ss_pred cCcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 91 MTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 91 HPni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
||||+. +|.||+++|. ++|+|++++++||.+|+++|.+|++++|+|++||++|
T Consensus 98 HPNV~~-~G~iCl~iL~--~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~ 150 (180)
T 2nvu_C 98 HPNIDL-EGNVALNILR--EDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVL 150 (180)
T ss_dssp BTTBCT-TSBBCCGGGT--TSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHH
T ss_pred cCCCCC-CCcEEccccc--ccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 999995 8999999986 8999999999999999999999999999999998764
No 36
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=1.1e-42 Score=262.48 Aligned_cols=127 Identities=23% Similarity=0.353 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHhHcCC---CCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccc
Q 032176 14 RNFRLLEELERGEKGI---GDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRIN 90 (146)
Q Consensus 14 ~~kRL~~El~~l~~~~---~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~ 90 (146)
..+||++|+++++++. +.+ +.+.+ .++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||
T Consensus 6 a~~Rl~kEl~~l~~~~~~~~~~-i~~~~-~~~nl~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 81 (201)
T 3k9o_A 6 AVQRIKREFKEVLKSEETSKNQ-IKVDL-VDENFT--ELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 81 (201)
T ss_dssp THHHHHHHHHHHHTCHHHHTTS-EEEEE-CSTTSS--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHHhCCCCCCCC-EEEEE-CCCCcc--EEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcc
Confidence 4789999999999863 345 66665 457766 9999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 91 MTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 91 HPni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
||||+..+|.||+++|. ++|+|++++.+||.+|+++|.+|++++|+|.+||++|
T Consensus 82 HPnv~~~~G~iCl~iL~--~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~ 135 (201)
T 3k9o_A 82 HPNISSVTGAICLDILK--DQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQY 135 (201)
T ss_dssp BTTBCTTTCBBCCGGGT--TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred cCCCcCCCCeeeCcccc--cCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHH
Confidence 99999669999999986 8999999999999999999999999999999998765
No 37
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-42 Score=254.20 Aligned_cols=125 Identities=14% Similarity=0.316 Sum_probs=114.8
Q ss_pred cHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccC
Q 032176 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (146)
Q Consensus 13 ~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (146)
.+.+||++|++++ +++++ +++.+++++|++ +|+++| ||++|||+||.|+++|.||++||++||+|+|.|+||||
T Consensus 6 ~~~~RL~kEl~~l--~~~~~-~~~~~~~~~~l~--~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (160)
T 1y8x_A 6 AAQLRIQKDINEL--NLPKT-CDISFSDPDDLL--NFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHP 79 (160)
T ss_dssp HHHHHHHHHHHTC--CCCTT-EEEECSSTTCTT--EEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBT
T ss_pred HHHHHHHHHHHhc--CCCCC-eEEEeccCCccc--eEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccC
Confidence 4689999999999 35556 677656788876 999988 99999999999999999999999999999999999999
Q ss_pred cccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 93 CVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 93 ni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
||+. +|.||+++|+ ++|+|++++++||.+|+++|.+|++++|+|++||++|
T Consensus 80 nv~~-~G~iCl~iL~--~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~ 130 (160)
T 1y8x_A 80 NIDL-EGNVCLNILR--EDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVL 130 (160)
T ss_dssp TBCT-TCBBCCGGGT--TTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHH
T ss_pred cCCC-CCeEEcccch--hhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 9995 8999999986 8999999999999999999999999999999998764
No 38
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=1e-42 Score=252.75 Aligned_cols=127 Identities=20% Similarity=0.372 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccCc
Q 032176 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (146)
Q Consensus 14 ~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPn 93 (146)
+.+||++|+++++++++.+ +.+..++++|++ +|+++|. |+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 3 a~~RL~kEl~~l~~~~~~~-~~~~~~~~~~l~--~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 78 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKN-FRNIQVDEANLL--TWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPN 78 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSS-CEEECSSCSSSS--EEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEeeCCCCchh--eEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCcccc
Confidence 3579999999999999888 444445677876 9999998 99999999999999999999999999999999999999
Q ss_pred ccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 94 VNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 94 i~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
|+. +|.||+++|. .++|+|++++.+||.+|+++|.+|++++|+|.+||.+|
T Consensus 79 v~~-~G~iCl~iL~-~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 129 (154)
T 1c4z_D 79 IDE-KGQVCLPVIS-AENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEY 129 (154)
T ss_dssp BCT-TCBBCCTTTS-SSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHH
T ss_pred CCC-CCEEECCCCC-CCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHH
Confidence 994 9999999984 47999999999999999999999999999999998654
No 39
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=7.7e-42 Score=265.31 Aligned_cols=130 Identities=22% Similarity=0.333 Sum_probs=117.7
Q ss_pred cccHHHHHHHHHHHhHcCC---CCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEec
Q 032176 11 VVPRNFRLLEELERGEKGI---GDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHS 87 (146)
Q Consensus 11 ~~~~~kRL~~El~~l~~~~---~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t 87 (146)
+....+||++||++|+++. +.+ +.+.+ .++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 55 s~~a~~RL~kEl~~l~~~~~~~~~g-i~v~p-~~dnl~--~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T 130 (253)
T 3e46_A 55 ANIAVQRIKREFKEVLKSEETSKNQ-IKVDL-VDENFT--ELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFIT 130 (253)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHTTS-EEEEE-CSTTSS--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCC-EEEEE-CCCccc--EEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecC
Confidence 3446899999999999863 455 66655 467866 9999999999999999999999999999999999999999
Q ss_pred ccccCcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 88 RINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 88 ~i~HPni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
+||||||+..+|.||+++|. ++|+|+++|++||++|+++|.+|++++|+|.+||++|
T Consensus 131 ~i~HPNV~~~~G~ICL~iL~--~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~ 187 (253)
T 3e46_A 131 KIWHPNISSVTGAICLDILK--DQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQY 187 (253)
T ss_dssp CCCBTTBCTTTCBBCCGGGT--TCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred CCccCCccCCCCeeeccccc--CCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHH
Confidence 99999999669999999986 8999999999999999999999999999999998765
No 40
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=5.1e-41 Score=236.27 Aligned_cols=117 Identities=22% Similarity=0.409 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEeccc-ccC
Q 032176 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI-NMT 92 (146)
Q Consensus 14 ~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i-~HP 92 (146)
+.+||++|+++++++++.+ +++.+ +++|++ +|+++|.||+|||||||.|+++|.||++||++||+|+|.|++ |||
T Consensus 7 a~~RL~kEl~~l~~~~~~~-~~~~~-~~~~l~--~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HP 82 (125)
T 2fo3_A 7 ANYRIQKELHNFLNNPPIN-CTLDV-HPNNIR--IWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHT 82 (125)
T ss_dssp --CHHHHHHHHHHHSCCTT-EEEEE-CTTCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBT
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEEe-Ccchhh--hhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCC
Confidence 3679999999999998877 66654 678876 999999999999999999999999999999999999999997 999
Q ss_pred cccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCC
Q 032176 93 CVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKL 137 (146)
Q Consensus 93 ni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~ 137 (146)
||+ .+|+||+++|. ++|+|++++++||.+|+++|.+|++++.
T Consensus 83 nv~-~~G~iCl~iL~--~~W~P~~~i~~vl~si~~ll~~p~~~~~ 124 (125)
T 2fo3_A 83 HVY-SNGDICLSLLG--DDYNPSLSISGLVLSIISMLSSAKEKKL 124 (125)
T ss_dssp TBC-TTSBBCCGGGT--TTCCTTCCHHHHHHHHHHHHC-------
T ss_pred cCC-CCCEEEchhcC--CCCCCCCcHHHHHHHHHHHHhCcccccC
Confidence 999 59999999986 8999999999999999999999998763
No 41
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.6e-40 Score=235.03 Aligned_cols=116 Identities=20% Similarity=0.384 Sum_probs=106.5
Q ss_pred cHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEeccc-cc
Q 032176 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI-NM 91 (146)
Q Consensus 13 ~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i-~H 91 (146)
.+.+||++|+++++++++.+ +.+.+ +++|++ +|+++|.||+|||||||.|+++|.||++||++||+|+|.|++ ||
T Consensus 20 ~~~~RL~kEl~~l~~~~~~~-~~~~~-~~~nl~--~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~H 95 (136)
T 2h2y_A 20 NANYRIQKELNNFLKNPPIN-CTIDV-HPSNIR--IWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKH 95 (136)
T ss_dssp SHHHHHHHHHHHHHHSCCTT-EEEEE-CTTCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCC-eEEEe-cccccc--ccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCC
Confidence 45899999999999998877 66654 678876 999999999999999999999999999999999999999997 99
Q ss_pred CcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 032176 92 TCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNR 135 (146)
Q Consensus 92 Pni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~ 135 (146)
|||+ .+|+||+++|. ++|+|++++++||.+|+++|.+|+.+
T Consensus 96 Pnv~-~~G~ICl~iL~--~~WsP~~ti~~vL~si~sll~~p~~k 136 (136)
T 2h2y_A 96 THVY-SNGDICLSVLG--DDYNPSLSISGLILSIISMLSSAKEK 136 (136)
T ss_dssp TTBC-TTCCBCCGGGT--TTCCTTCCHHHHHHHHHHHHSSSCC-
T ss_pred CcCC-CCCEEECcccc--CCCCCCCcHHHHHHHHHHHHhCcCcC
Confidence 9999 49999999986 89999999999999999999999753
No 42
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=1.8e-42 Score=251.14 Aligned_cols=123 Identities=17% Similarity=0.331 Sum_probs=111.2
Q ss_pred HHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccCcc
Q 032176 15 NFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCV 94 (146)
Q Consensus 15 ~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni 94 (146)
.|||++|+++++++ + +.+.+ .++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 4 ~~Rl~kEl~~l~~~---~-~~v~~-~~~~l~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni 76 (152)
T 2onu_A 4 LTRKQCDFTKLIMA---G-YDLEL-NNGSTQ--DFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNV 76 (152)
T ss_dssp CCHHHHTHHHHHHH---T-CCEEE-ETTEEE--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTB
T ss_pred HHHHHHHHHhcCcC---C-CEEEE-ccCccc--eEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcC
Confidence 46999999999885 3 34444 457755 99999999999999999999999999999999999999999999999
Q ss_pred cCCCCeeeccCCCCCCCCCCCCCHHHHHHH-HHHHhcCCCCCCCCCCCCCCCC
Q 032176 95 NHETGVVEPKKFGLLVNWQREYTMEDILTQ-LKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 95 ~~~~G~icl~~l~~~~~W~p~~~l~~il~~-i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
+..+|.||+++|. ++|+|++++.+||.+ |++||.+|++++|+|++||++|
T Consensus 77 ~~~~G~iCl~il~--~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~ 127 (152)
T 2onu_A 77 DEASGSVCLDVIN--QTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLL 127 (152)
T ss_dssp CTTTCBBCHHHHH--HHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHH
T ss_pred cCcCCeEeccccc--ccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 9558999999985 889999999999999 6899999999999999998764
No 43
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=4e-42 Score=253.54 Aligned_cols=125 Identities=21% Similarity=0.292 Sum_probs=112.4
Q ss_pred ccHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEeccccc
Q 032176 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINM 91 (146)
Q Consensus 12 ~~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~H 91 (146)
..+.+||++|++++++++ .+ + . .++|++ +|+++|.||+||||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 11 ~~~~~RL~~El~~l~~~~-~~---v-~-~~~~l~--~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~H 82 (171)
T 1yf9_A 11 LRSNRRREMDYMRLCNST-RK---V-Y-PSDTVA--EFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILH 82 (171)
T ss_dssp --CCHHHHHHHHHHHSSS-SC---E-E-ECSSTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred ccHHHHHHHHHHHHHhCC-CC---C-C-CCCCce--EEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCccc
Confidence 355789999999999987 33 2 2 367766 99999999999999999999999999999999999999999999
Q ss_pred CcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHH-HHHhcCCCCCCCCCCCCCCCC
Q 032176 92 TCVNHETGVVEPKKFGLLVNWQREYTMEDILTQL-KKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 92 Pni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i-~~ll~~p~~~~~~n~~a~~~~ 146 (146)
|||+..+|.||+++|. ++|+|++++++||.+| +++|.+|++++|+|++||++|
T Consensus 83 PNi~~~~G~iCl~iL~--~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~ 136 (171)
T 1yf9_A 83 PNVDERSGSVCLDVIN--QTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLL 136 (171)
T ss_dssp TTBCTTTCBBCHHHHH--HHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHH
T ss_pred ccCcccCCeEeccccc--cCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 9999559999999985 8999999999999997 799999999999999998764
No 44
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=5.3e-41 Score=251.27 Aligned_cols=129 Identities=16% Similarity=0.235 Sum_probs=115.5
Q ss_pred cccHHHHHHHHHHHhHcCCCCCceEEee---cCCCCCcee-EEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEe
Q 032176 11 VVPRNFRLLEELERGEKGIGDGTVSYGM---DDGDDIYMR-SWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFH 86 (146)
Q Consensus 11 ~~~~~kRL~~El~~l~~~~~~~~~~~~~---~~~~~~~l~-~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~ 86 (146)
..++.+||++||++++ .+++ +++.. ++++|+++. +|+++|. |++|||+||.|+++|.||++||++||+|+|.
T Consensus 27 ~s~a~~RL~kEl~~l~--~~~~-i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 102 (190)
T 3o2u_A 27 LSAARIRLKRDLDSLD--LPPT-VTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCL 102 (190)
T ss_dssp CCHHHHHHHHHHHTCC--CCTT-EEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEEC
T ss_pred ccHHHHHHHHHHHhcc--CCCC-EEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEe
Confidence 3456899999999999 4455 66653 677885333 9999997 8889999999999999999999999999999
Q ss_pred cccccCcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 87 SRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 87 t~i~HPni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
|+||||||+. +|.||+++|. ++|+|++++++||.+|+++|.+|++++|+|++||.+|
T Consensus 103 t~i~HPnV~~-~G~iCl~iL~--~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~ 159 (190)
T 3o2u_A 103 KKIFHPNIDL-KGNVCLNILR--EDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLL 159 (190)
T ss_dssp SCCCCTTBCT-TSBBCCGGGT--TTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHH
T ss_pred cCcccCCCCC-CCeEechhcc--CCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHH
Confidence 9999999994 9999999996 9999999999999999999999999999999998764
No 45
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=252.63 Aligned_cols=123 Identities=17% Similarity=0.320 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccCc
Q 032176 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (146)
Q Consensus 14 ~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPn 93 (146)
+.+||++|++++++. + +.+.+. +|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 26 a~~RL~kEl~~l~~~---g-~~v~~~--ddl~--~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPN 97 (179)
T 2z5d_A 26 GKRRMDTDVIKLIES---K-HEVTIL--GGLN--EFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPN 97 (179)
T ss_dssp HHHHHHHHHHHHHHS---S-SCEEEE--EETT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHhcCcC---C-CEEEEC--CCCc--eeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCc
Confidence 589999999999863 3 445543 4555 9999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeeeccCCCCCCCCCCCCCHHHHHHH-HHHHhcCCCCCCCCCCCCCCCC
Q 032176 94 VNHETGVVEPKKFGLLVNWQREYTMEDILTQ-LKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 94 i~~~~G~icl~~l~~~~~W~p~~~l~~il~~-i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
|+..+|.||+++|. ++|+|++++++||.+ |+++|.+|++++|+|++||++|
T Consensus 98 V~~~~G~ICL~iL~--~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~ 149 (179)
T 2z5d_A 98 IDEASGTVCLDVIN--QTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMY 149 (179)
T ss_dssp BCTTTCBBCHHHHH--HHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHH
T ss_pred CCCCCCeEeccccc--cCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 99549999999986 899999999999999 9999999999999999998764
No 46
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=1.3e-39 Score=267.37 Aligned_cols=126 Identities=25% Similarity=0.494 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccCc
Q 032176 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (146)
Q Consensus 14 ~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPn 93 (146)
+.|||++|+++++++++++ +++.+ .++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 4 a~~RL~kEl~~l~~~~~~~-~~~~p-~~~nl~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 79 (399)
T 4ddg_A 4 ALKRIHKELNDLARDPPAQ-CSAGP-VGDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 79 (399)
T ss_dssp HHHHHHHHHHHHHHSCCSS-EEEEE-ETTEEE--EEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEEE-cCCcce--EEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccc
Confidence 5789999999999999888 66654 567755 9999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 032176 94 VNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146 (146)
Q Consensus 94 i~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~n~~a~~~~ 146 (146)
|+. +|.||+++|. ++|+|++++++||.+|+++|.+|++++|+|++||++|
T Consensus 80 v~~-~G~iCl~il~--~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~ 129 (399)
T 4ddg_A 80 INS-NGSISLDILR--SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIY 129 (399)
T ss_dssp BCT-TCBBCCGGGT--TSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHH
T ss_pred cCC-CCeEeCcccc--cCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHH
Confidence 995 9999999986 8999999999999999999999999999999998764
No 47
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9e-39 Score=227.73 Aligned_cols=110 Identities=19% Similarity=0.291 Sum_probs=100.8
Q ss_pred HHHHHHHHHHhHcCCCCCceEEe-ecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccc--c
Q 032176 15 NFRLLEELERGEKGIGDGTVSYG-MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRIN--M 91 (146)
Q Consensus 15 ~kRL~~El~~l~~~~~~~~~~~~-~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~--H 91 (146)
.+||++|+++++++++++ +.+. .++++|++ +|+++|.||+|||||||.|+++|.||++||++||+|+|.|++| |
T Consensus 24 ~~RL~kEl~~l~~~~~~g-i~v~~~~~~~nl~--~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~H 100 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPG-MTLNEKSVQNSIT--QWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVH 100 (136)
T ss_dssp CHHHHHHHHHHHHSCCTT-CCCCTTCCCCSCE--EEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCB
T ss_pred HHHHHHHHHHHHhCCCCC-EEEEEeeCccccc--eeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCC
Confidence 489999999999999887 4432 25677865 9999999999999999999999999999999999999999999 9
Q ss_pred CcccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 032176 92 TCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMA 130 (146)
Q Consensus 92 Pni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~ 130 (146)
|||+. +|+||+++|. ++|+|++++++||.+|+++|.
T Consensus 101 PNV~~-~G~ICL~iL~--~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 101 PHVYS-NGHICLSILT--EDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp TTBCT-TCBBCCGGGT--TTCCTTSCHHHHHHHHHHHTC
T ss_pred ccCCC-CCeEEchhcC--CCCCCCCcHHHHHHHHHHHhC
Confidence 99994 9999999986 899999999999999999984
No 48
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=7.9e-40 Score=240.45 Aligned_cols=127 Identities=24% Similarity=0.468 Sum_probs=111.8
Q ss_pred cHHHHHHHHHHHhHcCC------------CCCceEEeecCCCCCceeEEEEEEECCCCCCCC--CcEEEEEEEecCCCCC
Q 032176 13 PRNFRLLEELERGEKGI------------GDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHE--GRIYQLKLFCDKDYPE 78 (146)
Q Consensus 13 ~~~kRL~~El~~l~~~~------------~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpye--gg~f~~~i~fp~~yP~ 78 (146)
.+.|||++|++++++++ ..+ +.+. ++++|++ +|+++|.||+||||+ ||.|+++|.||++||+
T Consensus 8 ~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~-i~~~-~~~~nl~--~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~ 83 (167)
T 4ds2_A 8 ISNKRIIKDLKLLLEEVDANNEANSSGSPHST-AIFS-VDTDTIY--NWILKVKAPADSVYGGAGNTYQLSVLFSDDYPH 83 (167)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTC----CCSSC-EEEE-EEESSTT--EEEEEEECCTTSGGGTTCCEEEEEEECCTTTTT
T ss_pred HHHHHHHHHHHHHHhCcccccccccccCCCCc-EEEE-eCCCccc--EEEEEEECCCCCCccCCCCEEEEEEECCCCCCC
Confidence 34789999999999876 344 4444 4678876 999999999999999 9999999999999999
Q ss_pred CCCEEEEecccccCcccCCCCeeeccCCCCCCCCCCCCCHHHHHH-HHHHHhcC--CCCCCCCCCCCCCCC
Q 032176 79 KPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILT-QLKKEMAA--PHNRKLVQPPEGTYF 146 (146)
Q Consensus 79 ~pP~v~f~t~i~HPni~~~~G~icl~~l~~~~~W~p~~~l~~il~-~i~~ll~~--p~~~~~~n~~a~~~~ 146 (146)
+||+|+|.|+||||||+ .+|.||+++|. ++|+|+++++++|+ .|++++.+ |++++|+|.|||.+|
T Consensus 84 ~pP~v~f~t~i~HPnv~-~~G~iCl~il~--~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~ 151 (167)
T 4ds2_A 84 EPPTVRFVTPVYSPLVT-GEGGICDRMVN--DFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYL 151 (167)
T ss_dssp SCCEEEESSCCCCSSCC-TTSCCCTHHHH--TTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHH
T ss_pred CCCEEEEeCCcccccCC-CCCEEEcccCc--CCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHH
Confidence 99999999999999999 69999999986 99999999999765 57777764 899999999998764
No 49
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.7e-36 Score=225.18 Aligned_cols=120 Identities=21% Similarity=0.240 Sum_probs=99.1
Q ss_pred cccccHHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecc
Q 032176 9 SVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSR 88 (146)
Q Consensus 9 ~~~~~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~ 88 (146)
.+..++.+||++|+++|+++++++ +.+.+ +++|++ +|+++|.||+||||+||.|+++|.||++||++||+|+|.|+
T Consensus 10 ~~~~~a~~RL~kEl~~l~~~~~~~-i~~~p-~~~nl~--~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~ 85 (187)
T 2f4w_A 10 RAPTTATQRLKQDYLRIKKDPVPY-ICAEP-LPSNIL--EWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP 85 (187)
T ss_dssp ----CHHHHHHHHHHHHHHSCCTT-EEEEE-ETTEEE--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC
T ss_pred CCccHHHHHHHHHHHHHHhCCCCC-EEEEE-cCCccc--eeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC
Confidence 444567999999999999999888 56554 567765 99999999999999999999999999999999999999999
Q ss_pred cccCcccCCCCeeeccCCCC-CCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 032176 89 INMTCVNHETGVVEPKKFGL-LVNWQREYTMEDILTQLKKEMAAPHNR 135 (146)
Q Consensus 89 i~HPni~~~~G~icl~~l~~-~~~W~p~~~l~~il~~i~~ll~~p~~~ 135 (146)
|||+++ +|+||+++|+. .++|+|+++|.+||.+|+++|.+|++.
T Consensus 86 --~~~~~~-~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~ 130 (187)
T 2f4w_A 86 --NGRFKC-NTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPT 130 (187)
T ss_dssp --CSSBCT-TSCBC----------CCTTCCHHHHHHHHHHHHHSCCCC
T ss_pred --Cceecc-CCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCC
Confidence 999995 99999999832 389999999999999999999999865
No 50
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=241.14 Aligned_cols=129 Identities=16% Similarity=0.207 Sum_probs=113.2
Q ss_pred ccccHHHHHHHHHHHhHcCCCCCc---eEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEe
Q 032176 10 VVVPRNFRLLEELERGEKGIGDGT---VSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFH 86 (146)
Q Consensus 10 ~~~~~~kRL~~El~~l~~~~~~~~---~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~ 86 (146)
.+..+.+||++|+++|+++++++. +.+ .++++|++ .|+++|.||+||||+||.|+|+|.||++||++||+|+|.
T Consensus 73 ~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v-~~~ednl~--~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~ 149 (323)
T 3ceg_A 73 NSAARARRLAQEAVTLSTSLPLSSSSSVFV-RCDEERLD--IMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLE 149 (323)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCCCSSCCEEE-EEESSCTT--EEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEEC
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCcccceee-cccCCCcc--ccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEe
Confidence 345679999999999999887652 222 24677876 999999999999999999999999999999999999999
Q ss_pred cc-----cccCcccCCCCeeeccCCCC-----CCCCCCCC-CHHHHHHHHHHHhc--CCCCCCCCCCCC
Q 032176 87 SR-----INMTCVNHETGVVEPKKFGL-----LVNWQREY-TMEDILTQLKKEMA--APHNRKLVQPPE 142 (146)
Q Consensus 87 t~-----i~HPni~~~~G~icl~~l~~-----~~~W~p~~-~l~~il~~i~~ll~--~p~~~~~~n~~a 142 (146)
|+ ||||||+ .+|+||+++|+. .++|+|++ +|.+||++|+++|. +|++++|+|.+|
T Consensus 150 T~~g~~~ifHPNV~-~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a 217 (323)
T 3ceg_A 150 TTGGHSVRFNPNLY-NDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERS 217 (323)
T ss_dssp CSTTTTCCCBTTBC-TTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGG
T ss_pred ccCCCcccccCCCC-cCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHH
Confidence 98 9999999 599999999952 26899999 89999999999996 777799999876
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=3.4e-36 Score=224.48 Aligned_cols=122 Identities=18% Similarity=0.270 Sum_probs=107.1
Q ss_pred cccHHHHHHHHHHHhHcCC---CCCceEEeecCCCCCceeEEEEEEECC-CCCCCCC-----------cEEEEEEEecCC
Q 032176 11 VVPRNFRLLEELERGEKGI---GDGTVSYGMDDGDDIYMRSWTGTIIGP-HNTVHEG-----------RIYQLKLFCDKD 75 (146)
Q Consensus 11 ~~~~~kRL~~El~~l~~~~---~~~~~~~~~~~~~~~~l~~w~~~i~Gp-~~tpyeg-----------g~f~~~i~fp~~ 75 (146)
+..+.+||++||+++++++ ..+ +++.+ .++|++ +|+++|.|| ++|||+| |.|+++|.||++
T Consensus 25 s~~a~~RL~kEl~~l~~~~~~~~~~-~~~~p-~~dnl~--~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~ 100 (186)
T 1zuo_A 25 SVQASDRLMKELRDIYRSQSYKTGI-YSVEL-INDSLY--DWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDN 100 (186)
T ss_dssp CHHHHHHHHHHHHHHHTSHHHHTTS-EEEEE-ETTEEE--EEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTT
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCc-EEEEE-cCCccc--eeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCC
Confidence 3456899999999999987 344 66665 457765 999999997 9999998 899999999999
Q ss_pred CCCCCCEEEEecccccC-cccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCC
Q 032176 76 YPEKPPSVRFHSRINMT-CVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLV 138 (146)
Q Consensus 76 yP~~pP~v~f~t~i~HP-ni~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~~p~~~~~~ 138 (146)
||++||+|+|.|++||| ||+ .+|.||+++|. .++|+|+++|++||++|+++|.+|+.+...
T Consensus 101 YP~~PP~V~f~tpi~hPnnV~-~~G~ICL~iL~-~~~WsP~~ti~~VL~sI~slL~~p~a~~~~ 162 (186)
T 1zuo_A 101 FPFDPPFVRVVLPVLSGGYVL-GGGALCMELLT-KQGWSSAYSIESVIMQINATLVKGKARVQF 162 (186)
T ss_dssp TTSSCCEEEEEESCEESTTBC-GGGBBCCGGGS-TTTCCTTSCHHHHHHHHHHHHHHTTCEECT
T ss_pred CCCCCCeEEEeCCccCCCccC-CCCcEEeccCC-CCCCCCcCcHHHHHHHHHHHHcCCChhHhh
Confidence 99999999999999999 699 59999999995 479999999999999999999999765433
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.92 E-value=4.1e-27 Score=170.66 Aligned_cols=97 Identities=11% Similarity=0.107 Sum_probs=84.8
Q ss_pred HHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCc----------EEEEEEEecCCCCCCCCEEE
Q 032176 15 NFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGR----------IYQLKLFCDKDYPEKPPSVR 84 (146)
Q Consensus 15 ~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg----------~f~~~i~fp~~yP~~pP~v~ 84 (146)
.+||++|++.|++. + .++.++++ .|.+.+.||+||+|+|| .|+++|.||++||++||+|+
T Consensus 34 ~~RL~eE~k~L~k~-------v-~p~k~n~~--~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~ 103 (172)
T 2z6o_A 34 VQRLKEEYQSLIRY-------V-ENNKNADN--DWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIA 103 (172)
T ss_dssp HHHHHHHHHHHHHH-------H-HHHHHTTC--CCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCB
T ss_pred HHHHHHHHHHHHHH-------h-ccCccccc--eeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeee
Confidence 68999999999992 1 23456655 99999999999999999 99999999999999999999
Q ss_pred Eecc-cccCcccCCCCeeeccCCCCCC---CCCCCCCHHHHHH
Q 032176 85 FHSR-INMTCVNHETGVVEPKKFGLLV---NWQREYTMEDILT 123 (146)
Q Consensus 85 f~t~-i~HPni~~~~G~icl~~l~~~~---~W~p~~~l~~il~ 123 (146)
|.+. +||||||. +|+||+++|. .. .|+|.++|.++|.
T Consensus 104 F~~~~~~hpnmY~-~G~ICLdIL~-kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 104 VPELDGKTAKMYR-GGKICLTDHF-KPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp CGGGTTTCSSBCT-TSBBCCCTTH-HHHHHHHTTSCCHHHHHH
T ss_pred eCCCCCCCCCCCC-CCcEechhhc-cccccccCCccCHHHHHh
Confidence 9998 99999995 9999999983 33 4459999999984
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.79 E-value=3.1e-19 Score=129.86 Aligned_cols=115 Identities=12% Similarity=0.188 Sum_probs=87.6
Q ss_pred HHHHHHHHHhHcCCCCCceEE-eecCCCCCceeEEEEEEECCCCCCCCCcE---EEEEEEecCCCCCCCCEEEEecc---
Q 032176 16 FRLLEELERGEKGIGDGTVSY-GMDDGDDIYMRSWTGTIIGPHNTVHEGRI---YQLKLFCDKDYPEKPPSVRFHSR--- 88 (146)
Q Consensus 16 kRL~~El~~l~~~~~~~~~~~-~~~~~~~~~l~~w~~~i~Gp~~tpyegg~---f~~~i~fp~~yP~~pP~v~f~t~--- 88 (146)
+|..+|+.++.+.-+...... ....+|.. .++-+.+.|.-.++|+|+. |.+.|-||.+||++||.|.|.++
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~--~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~ 108 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGT--PQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFD 108 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSC--EEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCC
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCC--hheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcc
Confidence 467778777755332211111 11233432 2566666776668999998 88999999999999999988651
Q ss_pred -------cc-cCcccCCCCeeeccCCCCCCCCCC-CCCHHHHHHHHHHHhcCCCCCC
Q 032176 89 -------IN-MTCVNHETGVVEPKKFGLLVNWQR-EYTMEDILTQLKKEMAAPHNRK 136 (146)
Q Consensus 89 -------i~-HPni~~~~G~icl~~l~~~~~W~p-~~~l~~il~~i~~ll~~p~~~~ 136 (146)
|+ ||||| .+|+||++.| ++|++ +.++.++|.+|+++|.+|++++
T Consensus 109 m~~~~~~I~~hpnVD-~~G~I~lpyL---~~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 109 MNTISSSLPIQEYID-SNGWIALPIL---HAWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp TTTSCTTSTHHHHBC-TTSBBCCGGG---GSCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred ccccccccCCCCCCC-CCCcEeCccc---ccCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 77 99999 5999999998 57999 6899999999999999999876
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.71 E-value=8.4e-19 Score=124.71 Aligned_cols=92 Identities=16% Similarity=0.237 Sum_probs=74.3
Q ss_pred HHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCc----------EEEEEEEecCCCCCCCCEEE
Q 032176 15 NFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGR----------IYQLKLFCDKDYPEKPPSVR 84 (146)
Q Consensus 15 ~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg----------~f~~~i~fp~~yP~~pP~v~ 84 (146)
..||..|+..|-+-. .. -...|+ .|...+.||+||+|+|+ .|+++|.||.+||..||+|+
T Consensus 36 ~~RlkeEy~alI~yv-----~~-nK~~d~----dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~ 105 (168)
T 3kpa_A 36 TARLKEEYASLITYV-----EH-NKASDS----HWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIA 105 (168)
T ss_dssp HHHHHHHHHHHHHHH-----HH-HHHTTC----CCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCB
T ss_pred HHHHHHHHHHHHHHH-----Hh-cccccC----CeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEee
Confidence 579999999886511 11 012233 89999999999999999 89999999999999999999
Q ss_pred Eecc-cccCcccCCCCeeeccCCCCCCCCCCC-------CCHHHHH
Q 032176 85 FHSR-INMTCVNHETGVVEPKKFGLLVNWQRE-------YTMEDIL 122 (146)
Q Consensus 85 f~t~-i~HPni~~~~G~icl~~l~~~~~W~p~-------~~l~~il 122 (146)
|.+. .+|||+| .+|+||++++ |+|. +.+...|
T Consensus 106 Fp~ldgkt~kmY-r~GkICLdIh-----wkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 106 LPELEGKTVKMY-RGGKICMTTH-----FFPLWARNVPYFGISHVL 145 (168)
T ss_dssp CGGGTTTCSSEE-TTTEECCCTT-----HHHHHHHTTTTCCHHHHH
T ss_pred cccccCcCcccc-CCCcEEeccc-----cchhhHhcCCchhHHHHH
Confidence 9995 8999999 5999999984 7654 5565554
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.52 E-value=1.1e-13 Score=98.97 Aligned_cols=77 Identities=19% Similarity=0.342 Sum_probs=67.8
Q ss_pred eeEEEEEEECCCCCCCCCcEEEE--EEEecCCCCCCCCEEEEecc------cccCcccCCCCeeeccCCCCCCCCCC-CC
Q 032176 46 MRSWTGTIIGPHNTVHEGRIYQL--KLFCDKDYPEKPPSVRFHSR------INMTCVNHETGVVEPKKFGLLVNWQR-EY 116 (146)
Q Consensus 46 l~~w~~~i~Gp~~tpyegg~f~~--~i~fp~~yP~~pP~v~f~t~------i~HPni~~~~G~icl~~l~~~~~W~p-~~ 116 (146)
|..|.++|. .+|+|+.|.+ .|-||.+||++||.| |.++ ..|||||. +|+||++.| ++|++ ..
T Consensus 53 LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~-~G~i~lpyL---~~W~~~~s 123 (146)
T 3obq_A 53 LMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDA-NGKIYLPYL---HEWKHPQS 123 (146)
T ss_dssp EEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCT-TCBBCCHHH---HTCCTTTC
T ss_pred EEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCC-CCCEecccc---cccCCCCC
Confidence 569999998 6799999995 888999999999999 7666 48999994 999999998 45987 89
Q ss_pred CHHHHHHHHHHHhcC
Q 032176 117 TMEDILTQLKKEMAA 131 (146)
Q Consensus 117 ~l~~il~~i~~ll~~ 131 (146)
++.+++..+++.|.+
T Consensus 124 nL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 124 DLLGLIQVMIVVFGD 138 (146)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh
Confidence 999999999998864
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.59 E-value=0.021 Score=38.76 Aligned_cols=67 Identities=22% Similarity=0.182 Sum_probs=42.8
Q ss_pred HHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEec
Q 032176 15 NFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHS 87 (146)
Q Consensus 15 ~kRL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t 87 (146)
..+...|+..|+.--.+. +.. .+... . .+.+.|....+..-+.-.+.+.|.||++||..||.+.+.+
T Consensus 12 ~e~q~~EleaL~sIy~d~-~~~--~~~~~-~--~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 12 GEEQRNELEALESIYPDS-FTV--LSENP-P--SFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHCSSS-EEE--CCSSS-C--EEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred HHHHHHHHHHHHHHccCc-eEE--ccCCC-C--EEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 456778888887744444 332 22222 1 5666665322222233478899999999999999998766
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=95.77 E-value=0.094 Score=35.41 Aligned_cols=107 Identities=14% Similarity=0.094 Sum_probs=59.0
Q ss_pred HHHHHHHHhHcCCCCCceEEeecCC-CCCceeEEEEEEECCCCCCCC--CcEEEEEEEecCCCCCCCCEEEEecccccCc
Q 032176 17 RLLEELERGEKGIGDGTVSYGMDDG-DDIYMRSWTGTIIGPHNTVHE--GRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (146)
Q Consensus 17 RL~~El~~l~~~~~~~~~~~~~~~~-~~~~l~~w~~~i~Gp~~tpye--gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPn 93 (146)
+...|+..|+.--.+. +...-... .... .+.+.|..+.+..-+ .-.+.+.|.+|++||..+|.+...+.. +
T Consensus 12 ~~~~EleaL~SIY~de-~~~~~~~~~~~~~--~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~~---~ 85 (128)
T 2day_A 12 VLPSEVEVLESIYLDE-LQVIKGNGRTSPW--EIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNPR---G 85 (128)
T ss_dssp HHHHHHHHHHHHSTTT-EEEECCTTSSCCE--EEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEEE---S
T ss_pred HHHHHHHHHHHHCCCc-eEEecCCCCCCCe--EEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcCC---C
Confidence 6788888888755444 33221111 1222 555556532221111 237889999999999999999887642 2
Q ss_pred ccCC-CCeeeccCCCCCCCC---CCCCCHHHHHHHHHHHhcCC
Q 032176 94 VNHE-TGVVEPKKFGLLVNW---QREYTMEDILTQLKKEMAAP 132 (146)
Q Consensus 94 i~~~-~G~icl~~l~~~~~W---~p~~~l~~il~~i~~ll~~p 132 (146)
+... -..+|-.+ .+.| ...--+.+++..++..|.+-
T Consensus 86 L~~~~~~~L~~~L---~~~~~e~~G~~mif~lv~~lqe~l~~~ 125 (128)
T 2day_A 86 LSDEQIHTILQVL---GHVAKAGLGTAMLYELIEKGKEILSGP 125 (128)
T ss_dssp SCHHHHHHHHHHH---HHHHHHTTTSCCHHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHHHHH---HHHHHHhCCCEEhHHHHHHHHHHHHhc
Confidence 2100 01122111 1223 22335888888888888764
No 58
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=94.68 E-value=0.29 Score=33.23 Aligned_cols=116 Identities=16% Similarity=0.184 Sum_probs=61.5
Q ss_pred CCCCCcccccHHHHHHHHHHHhHcCCCCCceEEeecCCCC------CceeEEEEEEECCCC-C-CCCCcEEEEEEEecCC
Q 032176 4 GSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDD------IYMRSWTGTIIGPHN-T-VHEGRIYQLKLFCDKD 75 (146)
Q Consensus 4 ~~~~~~~~~~~~kRL~~El~~l~~~~~~~~~~~~~~~~~~------~~l~~w~~~i~Gp~~-t-pyegg~f~~~i~fp~~ 75 (146)
|++++.....-..+...|+..|+.--.+. +.. .+.+. -. .+.+.|. +.+ . .-..-.+.+.|.||++
T Consensus 1 ~~~~~~~~~~~~e~q~~EleaL~SIY~d~-~~~--~~~~~~~~~~~~~--~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~ 74 (137)
T 1ukx_A 1 GSSGSSGMESYSQRQDHELQALEAIYGSD-FQD--LRPDARGRVREPP--EINLVLY-PQGLAGEEVYVQVELRVKCPPT 74 (137)
T ss_dssp CCCCSCCCCCHHHHHHHHHHHHHHHTSSS-EEE--CCCCCSSSCCCCC--CEEEEEC-CTTSCSSSCSCEEEEEECCCTT
T ss_pred CCCCCCCCcchHHHHHHHHHHHHHHCccc-cee--ccCcccCccCCCc--EEEEEEe-cCCcCCcccceEEEEEEECCCC
Confidence 45555544433556777888887644444 322 12110 11 4555555 322 1 0012368899999999
Q ss_pred CCCCCCEEEEecccccCcccCCC-CeeeccCCCCCCCC---CCCCCHHHHHHHHHHHhcC
Q 032176 76 YPEKPPSVRFHSRINMTCVNHET-GVVEPKKFGLLVNW---QREYTMEDILTQLKKEMAA 131 (146)
Q Consensus 76 yP~~pP~v~f~t~i~HPni~~~~-G~icl~~l~~~~~W---~p~~~l~~il~~i~~ll~~ 131 (146)
||..+|.+.+... .++.... ..+| ..|. +.| ...--+.+++..++..|.+
T Consensus 75 YP~~~P~i~l~~~---~~L~~~~~~~L~-~~L~--~~~~e~~G~~mif~lv~~lqe~l~~ 128 (137)
T 1ukx_A 75 YPDVVPEIDLKNA---KGLSNESVNLLK-SHLE--ELAKKQCGEVMIFELAHHVQSFLSE 128 (137)
T ss_dssp TTSSCCCCEEEEE---ESSSSSHHHHHH-HHHH--HHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCcEEEecC---CCCCHHHHHHHH-HHHH--HHHHHhCCCEEhHHHHHHHHHHHHh
Confidence 9999999987543 2232100 0111 1111 223 2233588888888888764
No 59
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=94.22 E-value=0.61 Score=34.04 Aligned_cols=83 Identities=17% Similarity=0.243 Sum_probs=59.6
Q ss_pred HHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecccccCcccC
Q 032176 17 RLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNH 96 (146)
Q Consensus 17 RL~~El~~l~~~~~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPni~~ 96 (146)
+|.+|+.++.=+. +.. .+ +++ ...++.+.... |..+.++|.++.+||..+|.+...-|. |.
T Consensus 5 ~li~Ei~~iGW~~----l~~--id-~~~--~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~--~~--- 65 (186)
T 3zqs_A 5 SLIEEIGTLGWDK----LVY--AD-TCF--STIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV--PF--- 65 (186)
T ss_dssp SHHHHHHHHCGGG----EEE--EC-TTS--SEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS--CC---
T ss_pred HHHHHHHHhCCce----eee--ec-CCc--cEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC--Cc---
Confidence 6888888886544 222 12 343 47788887443 678999999999999999988655442 10
Q ss_pred CCCeeeccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 032176 97 ETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMA 130 (146)
Q Consensus 97 ~~G~icl~~l~~~~~W~p~~~l~~il~~i~~ll~ 130 (146)
.-.|++..++.+++.+.+..|.
T Consensus 66 ------------~~~w~~~ssL~~v~~qF~~~Le 87 (186)
T 3zqs_A 66 ------------CASWTPQSSLISIYSQFLAAIE 87 (186)
T ss_dssp ------------CCCCCTTCCHHHHHHHHHHHHH
T ss_pred ------------ccccCCCccHHHHHHHHHHHHH
Confidence 1469999999999988877763
No 60
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=93.78 E-value=0.19 Score=34.36 Aligned_cols=66 Identities=15% Similarity=0.046 Sum_probs=40.4
Q ss_pred HHHHHHHHhHcCCCCCceEEeecCCC-------CCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEecc
Q 032176 17 RLLEELERGEKGIGDGTVSYGMDDGD-------DIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSR 88 (146)
Q Consensus 17 RL~~El~~l~~~~~~~~~~~~~~~~~-------~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~ 88 (146)
+-..|+..|+.--.+. +.. .+.. .. ..+.+.|....+ .-..-.+.+.|.+|++||..+|.+.+.+.
T Consensus 14 ~q~~EleaL~SIY~d~-~~~--~~~~~~~~~~~~~--~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 86 (138)
T 2yz0_A 14 IQCNELEAIRSIYMDD-FTD--LTKRKSSWDKQPQ--IIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV 86 (138)
T ss_dssp HHHHHHHHHHTTSSSS-EEC--CSTTSSSSCSSCC--SCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred HHHHHHHHHHHHChhh-hee--cccccccccCCCC--cEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence 4566777776644333 222 1211 11 266777774322 11234788999999999999999998753
No 61
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.49 E-value=0.33 Score=32.73 Aligned_cols=67 Identities=13% Similarity=0.045 Sum_probs=38.3
Q ss_pred HHHHHHHHhHcCCCC--CceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEEec
Q 032176 17 RLLEELERGEKGIGD--GTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHS 87 (146)
Q Consensus 17 RL~~El~~l~~~~~~--~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t 87 (146)
+...|+..|+.--.+ . +...-....+. ..+.+.|.. .+..=..-.+.+.|.+|.+||..+|.+...+
T Consensus 11 ~q~~EleaL~SIy~d~~e-~~~~~~~~~~~--~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHE-WEVLSRSETDG--TVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHHCCTTT-CCCSEECSSSC--EEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCc-eEEecCCCCCC--CeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 466778777653222 2 11111011112 267777763 2210012378999999999999999987653
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=88.88 E-value=0.47 Score=33.25 Aligned_cols=24 Identities=17% Similarity=0.106 Sum_probs=21.8
Q ss_pred EEEEEEEecCCCCCCCCEEEEecc
Q 032176 65 IYQLKLFCDKDYPEKPPSVRFHSR 88 (146)
Q Consensus 65 ~f~~~i~fp~~yP~~pP~v~f~t~ 88 (146)
.+.++|.+|.+||..+|.+...+.
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 799999999999999999987764
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=88.37 E-value=0.34 Score=33.74 Aligned_cols=24 Identities=21% Similarity=0.402 Sum_probs=21.3
Q ss_pred EEEEEEEecCCCCCCCCEEEEecc
Q 032176 65 IYQLKLFCDKDYPEKPPSVRFHSR 88 (146)
Q Consensus 65 ~f~~~i~fp~~yP~~pP~v~f~t~ 88 (146)
.+.+.|.+|.+||..||.+.....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 688999999999999999987764
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=64.35 E-value=5.3 Score=18.99 Aligned_cols=20 Identities=30% Similarity=0.225 Sum_probs=16.9
Q ss_pred cHHHHHHHHHHHhHcCCCCC
Q 032176 13 PRNFRLLEELERGEKGIGDG 32 (146)
Q Consensus 13 ~~~kRL~~El~~l~~~~~~~ 32 (146)
+..-||+-|+...|.+++.+
T Consensus 5 seldrlllelnavqhnppsg 24 (26)
T 3u3c_B 5 SELDRLLLELNAVQHNPPSG 24 (26)
T ss_pred HHHHHHHHHHhhhccCCCCC
Confidence 45789999999999988765
No 65
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=53.40 E-value=8.6 Score=20.68 Aligned_cols=16 Identities=25% Similarity=0.275 Sum_probs=12.9
Q ss_pred ccHHHHHHHHHHHhHc
Q 032176 12 VPRNFRLLEELERGEK 27 (146)
Q Consensus 12 ~~~~kRL~~El~~l~~ 27 (146)
.++.+|+.+|++++.+
T Consensus 27 v~~~~~~~~~~~~~~~ 42 (42)
T 3g9r_A 27 KSKIKRIENEIKRIKK 42 (42)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcC
Confidence 3578999999998864
No 66
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=42.23 E-value=65 Score=20.51 Aligned_cols=25 Identities=28% Similarity=0.272 Sum_probs=19.9
Q ss_pred CCCCCcccccHHHHHHHHHHHhHcC
Q 032176 4 GSGGSSVVVPRNFRLLEELERGEKG 28 (146)
Q Consensus 4 ~~~~~~~~~~~~kRL~~El~~l~~~ 28 (146)
|+.+++.+.....+|+.|+.+..++
T Consensus 1 ~~~~~~~~~~~l~~L~~~m~~~y~~ 25 (110)
T 2diq_A 1 GSSGSSGRSLQLDKLVNEMTQHYEN 25 (110)
T ss_dssp CTTSCCCCCHHHHHHHHHHHHHHTT
T ss_pred CCCcchhHHHHHHHHHHHHHHHHcc
Confidence 5677777777899999999987653
No 67
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=36.22 E-value=31 Score=25.22 Aligned_cols=26 Identities=8% Similarity=0.204 Sum_probs=22.4
Q ss_pred CCcEEEEEEEecCCCCC-----CCCEEEEec
Q 032176 62 EGRIYQLKLFCDKDYPE-----KPPSVRFHS 87 (146)
Q Consensus 62 egg~f~~~i~fp~~yP~-----~pP~v~f~t 87 (146)
+.|.|.|+=.+|--||. .||.|.|.-
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V 139 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLII 139 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEEE
Confidence 35889999999999998 899998863
No 68
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=24.22 E-value=34 Score=21.59 Aligned_cols=15 Identities=7% Similarity=0.102 Sum_probs=11.5
Q ss_pred cccHHHHHHHHHHHh
Q 032176 11 VVPRNFRLLEELERG 25 (146)
Q Consensus 11 ~~~~~kRL~~El~~l 25 (146)
..+-.||+++||+-|
T Consensus 60 ~LsQLKRvQRdlrGL 74 (87)
T 2rf4_B 60 SISQLKRIQRDFKGL 74 (87)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhhcCC
Confidence 344589999999876
No 69
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=22.67 E-value=47 Score=24.86 Aligned_cols=25 Identities=20% Similarity=0.454 Sum_probs=21.6
Q ss_pred CcEEEEEEEecCCCC-------CCCCEEEEec
Q 032176 63 GRIYQLKLFCDKDYP-------EKPPSVRFHS 87 (146)
Q Consensus 63 gg~f~~~i~fp~~yP-------~~pP~v~f~t 87 (146)
.|.|.|+=.+|--|| ..||.|.|.-
T Consensus 135 ~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~V 166 (241)
T 2bum_B 135 NGYYVFRTIKPGPYPWRNRINEWRPAHIHFSL 166 (241)
T ss_dssp TSEEEEEEECCCCEEESSSTTEEECSEEEEEE
T ss_pred CceEEEEEecCCccccCCCCCCCcCceEEEEE
Confidence 488999999999998 4799998863
No 70
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=22.50 E-value=47 Score=25.88 Aligned_cols=24 Identities=17% Similarity=0.282 Sum_probs=20.6
Q ss_pred CcEEEEEEEecCCCC------------------CCCCEEEEe
Q 032176 63 GRIYQLKLFCDKDYP------------------EKPPSVRFH 86 (146)
Q Consensus 63 gg~f~~~i~fp~~yP------------------~~pP~v~f~ 86 (146)
.|.|.|+-.+|.-|| ..||.|.|.
T Consensus 188 ~G~y~F~TI~Pg~Y~ip~dGp~G~lL~~~grh~~RpaHIH~~ 229 (312)
T 2xsu_A 188 NGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYF 229 (312)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CceEEEEEECcCcccCCCCCcHHHHHHHhhccCCCCceEEEE
Confidence 488999999999998 578998886
No 71
>4dac_A Computationally designed crystal forming protein; alpha-helix, three-helix bundle, coiled-coil protein, DE NOV computational protein design; 2.10A {Synthetic}
Probab=22.42 E-value=65 Score=15.40 Aligned_cols=13 Identities=31% Similarity=0.181 Sum_probs=10.6
Q ss_pred HHHHHHHHHHhHc
Q 032176 15 NFRLLEELERGEK 27 (146)
Q Consensus 15 ~kRL~~El~~l~~ 27 (146)
.|||.+|.-.+.-
T Consensus 10 vkrlekevgkleg 22 (28)
T 4dac_A 10 VKRLEKEVGKLEG 22 (28)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhh
Confidence 6899999888754
No 72
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=22.10 E-value=1.9e+02 Score=19.70 Aligned_cols=41 Identities=10% Similarity=0.247 Sum_probs=30.3
Q ss_pred eeEEE--EEEECCCCCCCC-CcEEEEEEEecCCCCCCCCEEEEecc
Q 032176 46 MRSWT--GTIIGPHNTVHE-GRIYQLKLFCDKDYPEKPPSVRFHSR 88 (146)
Q Consensus 46 l~~w~--~~i~Gp~~tpye-gg~f~~~i~fp~~yP~~pP~v~f~t~ 88 (146)
+.+|. +.+.|+.|.... .-+=++.+.+.+.|+ .|.-.+..+
T Consensus 32 ~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~--np~r~v~~p 75 (140)
T 3qrl_A 32 VRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFA--NPNRTFTDP 75 (140)
T ss_dssp CEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSS--SCEEEECST
T ss_pred ccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCC--CCeEEEcCC
Confidence 46998 899999888664 345568888888887 476666554
No 73
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=21.56 E-value=2.2e+02 Score=20.16 Aligned_cols=38 Identities=24% Similarity=0.343 Sum_probs=27.4
Q ss_pred eeEEEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCEEEE
Q 032176 46 MRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRF 85 (146)
Q Consensus 46 l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f 85 (146)
..+|.+.+.|+.|.-...-+=++.+.+.+.||. |.-.+
T Consensus 32 TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv 69 (175)
T 3rls_A 32 THLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSI 69 (175)
T ss_dssp CEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEE
T ss_pred cEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEE
Confidence 459999999987754444566788889999974 44433
No 74
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=21.40 E-value=52 Score=25.65 Aligned_cols=24 Identities=21% Similarity=0.476 Sum_probs=20.7
Q ss_pred CcEEEEEEEecCCCC------------------CCCCEEEEe
Q 032176 63 GRIYQLKLFCDKDYP------------------EKPPSVRFH 86 (146)
Q Consensus 63 gg~f~~~i~fp~~yP------------------~~pP~v~f~ 86 (146)
.|.|.|+=.+|.-|| ..||.|.|.
T Consensus 184 ~G~y~F~TI~Pg~Y~~p~dGp~g~lL~~~grh~~RpaHIHf~ 225 (311)
T 2azq_A 184 EGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHVHFF 225 (311)
T ss_dssp TCEEEEEEECCCCEECCTTSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CceEEEEEEcCCCcCCCCCCcHHHHHHhhhccCCCCceEEEE
Confidence 388999999999998 569999885
No 75
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=21.04 E-value=53 Score=24.55 Aligned_cols=24 Identities=17% Similarity=0.333 Sum_probs=21.5
Q ss_pred CcEEEEEEEecCCCCC-------CCCEEEEe
Q 032176 63 GRIYQLKLFCDKDYPE-------KPPSVRFH 86 (146)
Q Consensus 63 gg~f~~~i~fp~~yP~-------~pP~v~f~ 86 (146)
.|.|.|+=.+|--||. .||.|.|.
T Consensus 134 ~G~y~F~TI~Pg~Yp~p~~~~~~Rp~HIHf~ 164 (238)
T 3t63_M 134 DGYYSFRTIKPGPAPWRNGPNDWRPAHIYFG 164 (238)
T ss_dssp TSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CceEEEEEECCcCccCCCCCCCCcCCeEEEE
Confidence 4889999999999986 79999887
No 76
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=20.93 E-value=54 Score=25.33 Aligned_cols=24 Identities=17% Similarity=0.326 Sum_probs=20.7
Q ss_pred CcEEEEEEEecCCCC------------------CCCCEEEEe
Q 032176 63 GRIYQLKLFCDKDYP------------------EKPPSVRFH 86 (146)
Q Consensus 63 gg~f~~~i~fp~~yP------------------~~pP~v~f~ 86 (146)
.|.|.|+=.+|.-|| ..||.|.|.
T Consensus 184 ~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 225 (293)
T 1tmx_A 184 DGGYAFWAITPTPYPIPHDGPVGRMLAATGRSPMRASHLHFM 225 (293)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CceEEEEEECCCcccCCCCCchHHHHHhcccCCCCCceEEEE
Confidence 488999999999998 459999886
Done!